Query 013345
Match_columns 445
No_of_seqs 123 out of 820
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 08:50:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n58_A Adenosylhomocysteinase; 100.0 1E-149 3E-154 1163.3 36.9 422 12-445 3-464 (464)
2 3ond_A Adenosylhomocysteinase; 100.0 1E-136 4E-141 1075.9 36.7 444 1-445 4-488 (488)
3 3h9u_A Adenosylhomocysteinase; 100.0 2E-136 7E-141 1061.7 30.7 390 13-445 2-436 (436)
4 3gvp_A Adenosylhomocysteinase 100.0 2E-134 8E-139 1044.7 31.9 389 7-441 7-435 (435)
5 1v8b_A Adenosylhomocysteinase; 100.0 6E-109 2E-113 865.9 37.2 432 13-445 5-479 (479)
6 3ce6_A Adenosylhomocysteinase; 100.0 2E-107 8E-112 856.9 36.1 426 12-445 18-494 (494)
7 3d64_A Adenosylhomocysteinase; 100.0 3E-103 1E-107 824.9 37.2 433 1-445 22-494 (494)
8 3ngx_A Bifunctional protein fo 94.3 0.022 7.6E-07 56.1 3.2 41 268-311 184-224 (276)
9 2pi1_A D-lactate dehydrogenase 94.2 0.039 1.3E-06 55.1 5.0 55 265-320 182-240 (334)
10 4a5o_A Bifunctional protein fo 94.2 0.031 1.1E-06 55.2 4.1 44 268-314 195-238 (286)
11 3kb6_A D-lactate dehydrogenase 94.1 0.042 1.4E-06 54.8 5.0 56 264-320 181-240 (334)
12 3oet_A Erythronate-4-phosphate 93.9 0.051 1.7E-06 55.6 5.0 56 264-320 157-220 (381)
13 3p2o_A Bifunctional protein fo 93.7 0.036 1.2E-06 54.8 3.5 43 268-313 194-236 (285)
14 3l07_A Bifunctional protein fo 93.7 0.052 1.8E-06 53.6 4.6 43 268-313 195-237 (285)
15 4g2n_A D-isomer specific 2-hyd 93.5 0.063 2.2E-06 54.0 4.9 55 265-320 214-273 (345)
16 1wwk_A Phosphoglycerate dehydr 93.4 0.069 2.4E-06 52.4 5.0 49 265-313 184-236 (307)
17 4hy3_A Phosphoglycerate oxidor 93.3 0.075 2.5E-06 53.9 5.2 57 263-320 216-276 (365)
18 2yq5_A D-isomer specific 2-hyd 93.3 0.073 2.5E-06 53.5 5.0 54 266-320 189-246 (343)
19 4e5n_A Thermostable phosphite 93.0 0.077 2.6E-06 52.8 4.7 55 265-320 188-246 (330)
20 3gg9_A D-3-phosphoglycerate de 92.9 0.088 3E-06 53.0 5.0 51 263-313 200-255 (352)
21 3jtm_A Formate dehydrogenase, 92.8 0.11 3.7E-06 52.3 5.4 55 265-320 207-266 (351)
22 2o4c_A Erythronate-4-phosphate 92.7 0.1 3.5E-06 53.3 5.1 55 265-320 155-217 (380)
23 2ekl_A D-3-phosphoglycerate de 92.5 0.11 3.7E-06 51.2 4.9 56 264-320 183-242 (313)
24 1vl6_A Malate oxidoreductase; 92.5 0.11 3.8E-06 53.3 5.1 54 268-322 254-307 (388)
25 4a26_A Putative C-1-tetrahydro 92.5 0.07 2.4E-06 53.1 3.5 39 270-311 201-241 (300)
26 2rir_A Dipicolinate synthase, 92.3 0.15 5.1E-06 49.3 5.6 48 269-317 207-254 (300)
27 2g76_A 3-PGDH, D-3-phosphoglyc 92.2 0.14 4.9E-06 51.0 5.5 56 264-320 206-265 (335)
28 1gdh_A D-glycerate dehydrogena 91.8 0.15 5.1E-06 50.4 4.9 48 265-312 189-241 (320)
29 1qp8_A Formate dehydrogenase; 91.8 0.15 5.1E-06 50.1 4.9 46 268-313 165-214 (303)
30 3d4o_A Dipicolinate synthase s 91.8 0.21 7.2E-06 48.1 5.8 47 270-317 206-252 (293)
31 1ygy_A PGDH, D-3-phosphoglycer 91.7 0.16 5.4E-06 53.6 5.3 55 265-320 184-242 (529)
32 2c2x_A Methylenetetrahydrofola 91.6 0.17 5.8E-06 49.9 5.1 41 269-312 195-235 (281)
33 2j6i_A Formate dehydrogenase; 91.6 0.16 5.5E-06 51.2 5.0 50 270-320 214-267 (364)
34 3evt_A Phosphoglycerate dehydr 91.6 0.12 4.1E-06 51.4 4.0 52 268-320 182-237 (324)
35 3hg7_A D-isomer specific 2-hyd 91.3 0.095 3.2E-06 52.3 2.9 48 266-313 183-234 (324)
36 1mx3_A CTBP1, C-terminal bindi 91.2 0.18 6E-06 50.7 4.8 50 270-320 216-269 (347)
37 1dxy_A D-2-hydroxyisocaproate 91.2 0.2 6.8E-06 49.8 5.1 52 269-321 189-244 (333)
38 1a4i_A Methylenetetrahydrofola 91.0 0.17 5.7E-06 50.4 4.3 200 67-310 20-238 (301)
39 3gvx_A Glycerate dehydrogenase 90.7 0.19 6.6E-06 49.2 4.5 44 270-313 166-213 (290)
40 1xdw_A NAD+-dependent (R)-2-hy 90.7 0.24 8.2E-06 49.1 5.1 51 269-320 190-244 (331)
41 1b0a_A Protein (fold bifunctio 90.7 0.11 3.8E-06 51.4 2.7 40 269-311 194-233 (288)
42 1edz_A 5,10-methylenetetrahydr 90.5 0.14 4.8E-06 51.3 3.3 41 269-312 237-278 (320)
43 4dgs_A Dehydrogenase; structur 90.5 0.2 6.8E-06 50.3 4.4 52 269-321 214-269 (340)
44 3pp8_A Glyoxylate/hydroxypyruv 90.2 0.21 7.1E-06 49.5 4.2 45 269-313 185-233 (315)
45 1j4a_A D-LDH, D-lactate dehydr 90.0 0.25 8.6E-06 49.0 4.6 51 270-321 192-246 (333)
46 4b4u_A Bifunctional protein fo 89.9 0.41 1.4E-05 47.7 6.0 213 52-311 26-253 (303)
47 3l3e_A DNA topoisomerase 2-bin 89.6 2.4 8.3E-05 34.7 9.7 72 46-123 10-91 (107)
48 2nac_A NAD-dependent formate d 89.1 0.39 1.3E-05 49.1 5.4 48 265-312 234-286 (393)
49 4dio_A NAD(P) transhydrogenase 88.5 0.35 1.2E-05 49.8 4.5 41 269-309 267-312 (405)
50 3p2y_A Alanine dehydrogenase/p 88.4 0.41 1.4E-05 48.9 5.0 40 270-309 258-302 (381)
51 1sc6_A PGDH, D-3-phosphoglycer 88.3 0.4 1.4E-05 49.1 4.8 45 269-313 189-237 (404)
52 3k5p_A D-3-phosphoglycerate de 88.2 0.35 1.2E-05 49.9 4.3 53 267-320 198-254 (416)
53 1l7d_A Nicotinamide nucleotide 87.9 0.47 1.6E-05 47.6 5.0 40 271-310 251-295 (384)
54 2gcg_A Glyoxylate reductase/hy 87.8 0.47 1.6E-05 46.8 4.8 48 265-312 198-249 (330)
55 2cuk_A Glycerate dehydrogenase 87.6 0.46 1.6E-05 46.7 4.6 46 268-313 184-233 (311)
56 2w2k_A D-mandelate dehydrogena 87.5 0.45 1.5E-05 47.4 4.5 49 265-313 207-260 (348)
57 1x13_A NAD(P) transhydrogenase 87.0 0.49 1.7E-05 48.1 4.5 41 270-310 248-293 (401)
58 2a9f_A Putative malic enzyme ( 86.8 0.37 1.3E-05 49.7 3.4 54 268-322 249-302 (398)
59 2dbq_A Glyoxylate reductase; D 86.7 0.61 2.1E-05 46.1 4.9 48 265-312 192-243 (334)
60 3ba1_A HPPR, hydroxyphenylpyru 85.7 0.53 1.8E-05 46.8 3.9 51 269-320 207-261 (333)
61 2d0i_A Dehydrogenase; structur 83.1 1.1 3.7E-05 44.4 4.8 47 265-312 188-238 (333)
62 3hdj_A Probable ornithine cycl 82.9 0.76 2.6E-05 45.3 3.6 49 270-321 176-228 (313)
63 3pdi_A Nitrogenase MOFE cofact 81.5 3.2 0.00011 43.2 7.9 81 50-139 328-408 (483)
64 2vhw_A Alanine dehydrogenase; 80.0 1.2 4.1E-05 44.6 3.9 40 270-309 224-268 (377)
65 3u7q_A Nitrogenase molybdenum- 78.9 4.7 0.00016 42.2 8.1 80 50-138 344-423 (492)
66 3oj0_A Glutr, glutamyl-tRNA re 78.5 1.7 5.8E-05 36.8 3.8 38 270-310 73-111 (144)
67 1pvv_A Otcase, ornithine carba 78.4 8.5 0.00029 38.2 9.4 66 39-107 143-212 (315)
68 3is3_A 17BETA-hydroxysteroid d 78.2 11 0.00038 34.9 9.8 104 36-142 1-106 (270)
69 2k6g_A Replication factor C su 77.8 12 0.00039 31.6 8.8 67 48-122 29-106 (109)
70 2ebu_A Replication factor C su 76.4 11 0.00038 32.0 8.4 68 48-123 19-97 (112)
71 3sds_A Ornithine carbamoyltran 76.4 7.2 0.00025 39.4 8.3 62 39-100 163-234 (353)
72 3csu_A Protein (aspartate carb 75.8 6.9 0.00024 38.8 7.9 66 39-107 142-210 (310)
73 2i6u_A Otcase, ornithine carba 75.7 10 0.00035 37.5 9.1 66 39-107 136-206 (307)
74 3aek_A Light-independent proto 75.0 8.7 0.0003 39.2 8.7 77 50-137 303-382 (437)
75 1l7b_A DNA ligase; BRCT, autos 74.5 7 0.00024 31.9 6.4 68 48-124 4-81 (92)
76 1ml4_A Aspartate transcarbamoy 73.5 8.1 0.00028 38.3 7.7 67 39-108 143-211 (308)
77 4ekn_B Aspartate carbamoyltran 73.2 12 0.00039 37.1 8.8 68 39-109 139-209 (306)
78 1vlv_A Otcase, ornithine carba 72.2 11 0.00039 37.5 8.5 66 39-107 155-225 (325)
79 1gq2_A Malic enzyme; oxidoredu 71.2 5 0.00017 43.0 5.9 56 268-323 349-411 (555)
80 4ep1_A Otcase, ornithine carba 70.6 13 0.00045 37.4 8.6 65 39-107 167-236 (340)
81 2eez_A Alanine dehydrogenase; 70.5 3.4 0.00012 41.0 4.2 42 270-311 222-268 (369)
82 3grf_A Ornithine carbamoyltran 68.9 9.6 0.00033 38.1 7.1 69 39-107 142-223 (328)
83 3fr7_A Putative ketol-acid red 68.6 0.92 3.2E-05 48.3 -0.3 51 262-313 101-159 (525)
84 3tpf_A Otcase, ornithine carba 68.2 13 0.00045 36.7 7.9 67 39-108 133-204 (307)
85 1o0s_A NAD-ME, NAD-dependent m 67.9 7.7 0.00026 41.9 6.5 56 269-324 388-450 (605)
86 2w37_A Ornithine carbamoyltran 67.7 12 0.00043 37.8 7.7 66 39-107 164-234 (359)
87 1pj3_A NAD-dependent malic enz 67.7 6.8 0.00023 42.1 6.0 55 269-323 355-416 (564)
88 4a8t_A Putrescine carbamoyltra 67.2 12 0.00042 37.5 7.5 68 39-107 160-232 (339)
89 1dxh_A Ornithine carbamoyltran 66.7 13 0.00043 37.4 7.5 68 39-108 142-214 (335)
90 1duv_G Octase-1, ornithine tra 66.7 15 0.00051 36.8 8.0 67 39-107 141-213 (333)
91 1oth_A Protein (ornithine tran 66.4 12 0.00042 37.2 7.3 66 39-107 143-212 (321)
92 4a8p_A Putrescine carbamoyltra 65.3 14 0.00048 37.4 7.5 68 39-107 138-210 (355)
93 2ef0_A Ornithine carbamoyltran 63.8 16 0.00055 36.0 7.5 58 39-99 142-199 (301)
94 1pjc_A Protein (L-alanine dehy 63.7 6.5 0.00022 38.9 4.7 41 271-311 224-269 (361)
95 3gem_A Short chain dehydrogena 62.6 34 0.0012 31.6 9.3 89 47-141 20-108 (260)
96 1x7d_A Ornithine cyclodeaminas 61.9 4.8 0.00016 40.1 3.4 46 270-318 187-238 (350)
97 2zat_A Dehydrogenase/reductase 61.8 41 0.0014 30.6 9.5 91 48-141 8-100 (260)
98 3gd5_A Otcase, ornithine carba 61.5 20 0.00067 35.8 7.7 65 39-107 145-214 (323)
99 3ijr_A Oxidoreductase, short c 61.4 42 0.0014 31.5 9.8 92 48-141 41-134 (291)
100 1mio_B Nitrogenase molybdenum 61.3 47 0.0016 33.9 10.8 79 51-137 309-390 (458)
101 1pg5_A Aspartate carbamoyltran 60.3 23 0.00077 34.9 7.8 62 40-107 138-202 (299)
102 2i99_A MU-crystallin homolog; 59.3 8.2 0.00028 37.4 4.5 42 269-313 188-230 (312)
103 1gpj_A Glutamyl-tRNA reductase 59.2 9.6 0.00033 38.3 5.1 62 270-342 220-288 (404)
104 4amu_A Ornithine carbamoyltran 57.8 1.6E+02 0.0056 29.7 18.0 95 19-115 34-138 (365)
105 3av3_A Phosphoribosylglycinami 57.5 37 0.0013 31.4 8.4 68 68-140 18-90 (212)
106 4g81_D Putative hexonate dehyd 56.5 35 0.0012 32.3 8.3 88 51-141 6-95 (255)
107 2d8m_A DNA-repair protein XRCC 56.1 27 0.00091 29.5 6.7 65 49-122 20-94 (129)
108 4amu_A Ornithine carbamoyltran 54.7 21 0.00073 36.2 6.7 66 39-107 168-240 (365)
109 1qgu_B Protein (nitrogenase mo 54.0 85 0.0029 32.8 11.5 80 50-139 356-441 (519)
110 3d6n_B Aspartate carbamoyltran 53.3 23 0.00078 34.8 6.5 60 39-106 134-195 (291)
111 3q98_A Transcarbamylase; rossm 53.3 39 0.0013 34.6 8.5 69 39-107 176-255 (399)
112 2dvm_A Malic enzyme, 439AA lon 52.4 17 0.00057 37.8 5.6 53 269-321 255-308 (439)
113 3gxh_A Putative phosphatase (D 52.2 62 0.0021 27.8 8.6 79 57-141 22-106 (157)
114 3da8_A Probable 5'-phosphoribo 52.2 29 0.001 32.4 6.8 58 77-140 37-97 (215)
115 1zem_A Xylitol dehydrogenase; 51.3 80 0.0027 28.8 9.7 88 51-141 4-93 (262)
116 2yx6_A Hypothetical protein PH 51.0 24 0.00082 29.2 5.5 44 69-116 54-97 (121)
117 3gaf_A 7-alpha-hydroxysteroid 50.9 71 0.0024 29.2 9.2 92 48-142 6-99 (256)
118 1eo1_A Hypothetical protein MT 50.7 29 0.00098 28.8 5.9 44 69-116 56-99 (124)
119 1o13_A Probable NIFB protein; 50.6 23 0.00077 30.5 5.4 44 69-116 67-110 (136)
120 3nv9_A Malic enzyme; rossmann 49.7 18 0.00062 38.2 5.4 53 268-320 285-338 (487)
121 2b4q_A Rhamnolipids biosynthes 49.2 1E+02 0.0035 28.6 10.1 87 51-141 26-114 (276)
122 3auf_A Glycinamide ribonucleot 49.0 62 0.0021 30.3 8.6 81 55-140 23-109 (229)
123 2xdq_A Light-independent proto 48.9 60 0.0021 32.9 9.1 76 51-137 314-399 (460)
124 2pb9_A Phosphomethylpyrimidine 48.7 20 0.0007 33.4 5.0 81 54-141 69-162 (195)
125 1zq6_A Otcase, ornithine carba 48.4 51 0.0017 33.4 8.3 68 39-107 176-254 (359)
126 1fmt_A Methionyl-tRNA FMet for 47.6 46 0.0016 32.6 7.7 77 55-140 4-89 (314)
127 2c07_A 3-oxoacyl-(acyl-carrier 47.5 1.1E+02 0.0038 28.2 10.1 91 49-142 39-131 (285)
128 2bw0_A 10-FTHFDH, 10-formyltet 47.5 48 0.0016 32.7 7.9 55 55-111 23-80 (329)
129 2ae2_A Protein (tropinone redu 47.3 1.3E+02 0.0044 27.3 10.4 90 51-142 6-97 (260)
130 2h9a_B CO dehydrogenase/acetyl 47.0 1.9E+02 0.0064 28.4 12.0 95 38-142 113-211 (310)
131 3ulk_A Ketol-acid reductoisome 46.4 7.3 0.00025 41.1 1.8 50 262-312 83-135 (491)
132 3u7q_B Nitrogenase molybdenum- 46.3 1E+02 0.0036 32.3 10.6 80 51-140 361-446 (523)
133 4f2g_A Otcase 1, ornithine car 46.2 21 0.00072 35.3 5.0 54 39-95 142-195 (309)
134 3ia7_A CALG4; glycosysltransfe 45.9 59 0.002 30.7 8.1 42 62-110 17-58 (402)
135 1meo_A Phosophoribosylglycinam 45.4 47 0.0016 30.7 7.1 58 78-140 27-87 (209)
136 1vl8_A Gluconate 5-dehydrogena 44.8 97 0.0033 28.5 9.2 94 46-142 13-109 (267)
137 2re2_A Uncharacterized protein 44.7 35 0.0012 29.2 5.7 44 69-117 70-113 (136)
138 2yfk_A Aspartate/ornithine car 44.0 66 0.0023 33.1 8.5 69 39-107 173-252 (418)
139 2xdq_B Light-independent proto 43.9 93 0.0032 32.3 9.7 78 50-138 299-378 (511)
140 3q0i_A Methionyl-tRNA formyltr 43.3 43 0.0015 33.0 6.8 78 55-141 8-94 (318)
141 3rfo_A Methionyl-tRNA formyltr 43.1 63 0.0022 31.7 7.9 77 56-141 6-91 (317)
142 2bln_A Protein YFBG; transfera 42.7 68 0.0023 31.2 8.0 76 56-140 2-83 (305)
143 2yfk_A Aspartate/ornithine car 42.6 43 0.0015 34.5 6.9 60 49-110 55-122 (418)
144 4h31_A Otcase, ornithine carba 41.8 37 0.0013 34.2 6.1 69 39-108 167-240 (358)
145 1tx2_A DHPS, dihydropteroate s 41.7 1.3E+02 0.0046 29.3 10.0 97 33-143 101-209 (297)
146 1omo_A Alanine dehydrogenase; 40.6 24 0.00081 34.4 4.4 40 269-312 180-220 (322)
147 1xu9_A Corticosteroid 11-beta- 40.4 32 0.0011 31.9 5.1 109 30-141 4-116 (286)
148 1g0o_A Trihydroxynaphthalene r 40.3 65 0.0022 29.8 7.2 90 51-142 26-117 (283)
149 2wfb_A Putative uncharacterize 40.2 39 0.0013 27.9 5.1 44 69-116 58-102 (120)
150 3afn_B Carbonyl reductase; alp 40.0 1.4E+02 0.0049 26.4 9.3 72 69-142 22-95 (258)
151 1yb1_A 17-beta-hydroxysteroid 39.9 2E+02 0.007 26.1 10.6 90 49-141 26-117 (272)
152 2qrj_A Saccharopine dehydrogen 39.9 19 0.00065 36.9 3.6 37 273-309 259-300 (394)
153 4fn4_A Short chain dehydrogena 39.7 74 0.0025 30.1 7.6 88 51-141 4-93 (254)
154 3ib6_A Uncharacterized protein 39.5 1.8E+02 0.0062 24.9 10.1 90 61-152 33-137 (189)
155 3grp_A 3-oxoacyl-(acyl carrier 39.1 2.1E+02 0.0071 26.3 10.5 87 50-142 23-111 (266)
156 1jkx_A GART;, phosphoribosylgl 38.8 1.3E+02 0.0045 27.7 9.0 68 68-140 15-87 (212)
157 3r3s_A Oxidoreductase; structu 38.6 1.4E+02 0.0047 27.9 9.3 94 47-142 42-138 (294)
158 3d8t_A Uroporphyrinogen-III sy 38.4 21 0.00071 33.8 3.5 40 43-84 22-61 (286)
159 2d5c_A AROE, shikimate 5-dehyd 38.2 27 0.00094 32.4 4.2 38 270-311 165-208 (263)
160 4e38_A Keto-hydroxyglutarate-a 38.2 1.1E+02 0.0037 29.0 8.4 72 38-127 75-146 (232)
161 2q2v_A Beta-D-hydroxybutyrate 37.4 1.2E+02 0.0042 27.3 8.5 69 68-141 18-88 (255)
162 3jtm_A Formate dehydrogenase, 37.1 55 0.0019 32.6 6.5 52 271-322 56-107 (351)
163 1yxm_A Pecra, peroxisomal tran 36.9 1.9E+02 0.0063 26.7 9.8 91 48-141 12-109 (303)
164 3osu_A 3-oxoacyl-[acyl-carrier 36.7 84 0.0029 28.4 7.2 72 69-142 19-92 (246)
165 3v2g_A 3-oxoacyl-[acyl-carrier 36.6 80 0.0027 29.3 7.2 92 49-142 26-119 (271)
166 3aek_B Light-independent proto 36.4 1.2E+02 0.0043 31.5 9.3 77 50-137 276-354 (525)
167 3tqq_A Methionyl-tRNA formyltr 36.3 63 0.0022 31.7 6.7 65 70-141 17-89 (314)
168 3rsc_A CALG2; TDP, enediyne, s 36.2 67 0.0023 30.8 6.8 50 55-111 21-75 (415)
169 3sx2_A Putative 3-ketoacyl-(ac 36.1 2.5E+02 0.0085 25.5 11.6 92 48-141 7-111 (278)
170 1n2z_A Vitamin B12 transport p 35.8 67 0.0023 29.0 6.4 51 71-123 50-100 (245)
171 1rdu_A Conserved hypothetical 35.7 29 0.00099 28.4 3.6 44 69-116 53-96 (116)
172 3lk7_A UDP-N-acetylmuramoylala 35.4 71 0.0024 32.3 7.1 56 50-107 5-60 (451)
173 3hgj_A Chromate reductase; TIM 35.2 1.4E+02 0.0047 29.4 9.0 81 36-117 206-303 (349)
174 4ehi_A Bifunctional purine bio 35.2 72 0.0025 34.0 7.2 48 56-111 26-73 (534)
175 3zzm_A Bifunctional purine bio 34.9 56 0.0019 34.8 6.3 107 55-238 11-117 (523)
176 3o1l_A Formyltetrahydrofolate 34.8 47 0.0016 32.6 5.5 57 77-140 131-189 (302)
177 1iy8_A Levodione reductase; ox 34.8 1.8E+02 0.0062 26.4 9.3 89 50-141 9-101 (267)
178 3ruf_A WBGU; rossmann fold, UD 34.4 79 0.0027 29.7 6.9 83 50-142 21-110 (351)
179 3sqd_A PAX-interacting protein 34.3 67 0.0023 29.6 6.2 35 48-82 119-153 (219)
180 3sds_A Ornithine carbamoyltran 34.2 49 0.0017 33.4 5.6 49 270-318 251-318 (353)
181 4hn9_A Iron complex transport 34.1 77 0.0026 30.3 6.8 49 71-123 109-157 (335)
182 3uog_A Alcohol dehydrogenase; 33.9 2.2E+02 0.0074 27.4 10.1 95 35-141 171-266 (363)
183 3h7a_A Short chain dehydrogena 33.8 1.1E+02 0.0038 27.8 7.6 71 68-142 21-93 (252)
184 2hk9_A Shikimate dehydrogenase 33.7 34 0.0011 32.3 4.1 38 270-310 179-222 (275)
185 4fs3_A Enoyl-[acyl-carrier-pro 33.6 1.4E+02 0.0049 27.3 8.4 87 51-141 3-95 (256)
186 2rhc_B Actinorhodin polyketide 33.4 1.2E+02 0.0042 27.9 8.0 87 52-141 20-108 (277)
187 2bgk_A Rhizome secoisolaricire 32.8 2E+02 0.0068 25.9 9.1 91 49-142 11-102 (278)
188 3ixl_A Amdase, arylmalonate de 32.4 53 0.0018 30.7 5.2 54 174-238 164-220 (240)
189 4dmm_A 3-oxoacyl-[acyl-carrier 32.2 1E+02 0.0035 28.4 7.2 91 50-142 24-116 (269)
190 3lyl_A 3-oxoacyl-(acyl-carrier 32.1 1.6E+02 0.0053 26.3 8.2 71 69-142 20-92 (247)
191 4eye_A Probable oxidoreductase 31.9 2.2E+02 0.0074 27.2 9.7 97 34-142 140-237 (342)
192 2b0j_A 5,10-methenyltetrahydro 31.8 29 0.001 34.8 3.4 45 265-309 128-176 (358)
193 2p9j_A Hypothetical protein AQ 31.8 1.8E+02 0.0063 23.8 8.1 62 62-126 36-97 (162)
194 4iin_A 3-ketoacyl-acyl carrier 31.4 1E+02 0.0034 28.3 6.9 92 49-142 24-117 (271)
195 3otg_A CALG1; calicheamicin, T 31.3 1.1E+02 0.0038 29.0 7.4 50 55-111 21-75 (412)
196 3r7f_A Aspartate carbamoyltran 31.2 57 0.0019 32.2 5.4 67 48-115 30-104 (304)
197 1vyr_A Pentaerythritol tetrani 31.2 98 0.0033 30.8 7.2 82 38-121 217-312 (364)
198 3pct_A Class C acid phosphatas 31.1 93 0.0032 29.8 6.8 110 62-193 101-217 (260)
199 2q8p_A Iron-regulated surface 31.0 74 0.0025 28.9 5.9 50 71-123 53-102 (260)
200 3gms_A Putative NADPH:quinone 31.0 2.2E+02 0.0076 27.0 9.5 95 37-142 128-223 (340)
201 3md9_A Hemin-binding periplasm 30.9 1.2E+02 0.0041 27.4 7.3 51 71-123 52-103 (255)
202 2ywr_A Phosphoribosylglycinami 30.8 1.3E+02 0.0046 27.6 7.6 68 68-140 16-88 (216)
203 4f2g_A Otcase 1, ornithine car 30.7 49 0.0017 32.7 4.8 49 270-318 209-275 (309)
204 1zmt_A Haloalcohol dehalogenas 30.5 1E+02 0.0034 28.0 6.7 67 69-142 16-82 (254)
205 1wcw_A Uroporphyrinogen III sy 30.2 42 0.0014 30.8 4.1 34 48-83 2-35 (261)
206 1k1e_A Deoxy-D-mannose-octulos 30.0 2E+02 0.0068 24.5 8.3 79 63-146 36-115 (180)
207 2r7a_A Bacterial heme binding 30.0 1.3E+02 0.0044 27.2 7.3 51 71-123 52-104 (256)
208 4ibo_A Gluconate dehydrogenase 30.0 1.4E+02 0.0048 27.6 7.7 89 51-142 23-113 (271)
209 3nrc_A Enoyl-[acyl-carrier-pro 29.8 2.3E+02 0.0078 26.0 9.1 87 51-142 23-113 (280)
210 4e12_A Diketoreductase; oxidor 29.6 35 0.0012 32.1 3.4 43 269-311 77-124 (283)
211 3qgm_A P-nitrophenyl phosphata 29.5 80 0.0027 28.3 5.8 44 62-105 24-67 (268)
212 3ucx_A Short chain dehydrogena 29.4 1.6E+02 0.0056 26.8 8.0 89 50-141 7-97 (264)
213 2jah_A Clavulanic acid dehydro 29.4 1.3E+02 0.0045 27.1 7.3 87 52-141 5-93 (247)
214 3tqr_A Phosphoribosylglycinami 29.3 1.8E+02 0.006 27.0 8.2 81 55-140 6-91 (215)
215 4imr_A 3-oxoacyl-(acyl-carrier 29.0 2.1E+02 0.0073 26.4 8.8 88 51-142 30-119 (275)
216 1zk4_A R-specific alcohol dehy 29.0 2.1E+02 0.0072 25.3 8.5 88 51-141 3-91 (251)
217 3f4w_A Putative hexulose 6 pho 29.0 2.2E+02 0.0076 25.0 8.6 68 35-108 40-108 (211)
218 3r7f_A Aspartate carbamoyltran 29.0 92 0.0031 30.7 6.4 50 39-91 135-186 (304)
219 4id3_A DNA repair protein REV1 28.7 56 0.0019 25.1 4.0 36 48-83 4-39 (92)
220 3tfo_A Putative 3-oxoacyl-(acy 28.6 1.4E+02 0.0048 27.6 7.5 71 69-142 19-91 (264)
221 2hq1_A Glucose/ribitol dehydro 28.6 2.1E+02 0.0073 25.2 8.4 72 68-142 19-93 (247)
222 4ds3_A Phosphoribosylglycinami 28.4 1.1E+02 0.0039 28.2 6.7 80 56-140 9-94 (209)
223 2g04_A Probable fatty-acid-COA 28.4 49 0.0017 33.2 4.4 36 49-85 4-39 (359)
224 2yvq_A Carbamoyl-phosphate syn 28.3 74 0.0025 27.4 5.1 52 49-110 21-74 (143)
225 3ef0_A RNA polymerase II subun 28.3 1E+02 0.0034 31.1 6.7 34 49-82 280-317 (372)
226 2yim_A Probable alpha-methylac 28.2 53 0.0018 32.9 4.7 35 50-85 3-37 (360)
227 3ip1_A Alcohol dehydrogenase, 28.1 3.5E+02 0.012 26.4 10.6 101 31-143 190-293 (404)
228 3ubm_A COAT2, formyl-COA:oxala 28.1 52 0.0018 34.1 4.7 41 44-85 23-63 (456)
229 3r1i_A Short-chain type dehydr 28.0 1.7E+02 0.0059 27.0 8.0 90 50-142 28-119 (276)
230 4gkb_A 3-oxoacyl-[acyl-carrier 27.9 1.7E+02 0.0059 27.4 8.0 69 69-141 22-92 (258)
231 3gd5_A Otcase, ornithine carba 27.9 67 0.0023 32.0 5.3 49 270-318 218-284 (323)
232 4exb_A Putative uncharacterize 27.6 1E+02 0.0035 29.4 6.4 52 54-110 184-236 (292)
233 2obb_A Hypothetical protein; s 27.5 19 0.00065 31.5 1.1 74 64-141 26-99 (142)
234 3qlj_A Short chain dehydrogena 27.5 2.5E+02 0.0084 26.5 9.1 91 51-143 24-125 (322)
235 3p9x_A Phosphoribosylglycinami 27.4 2.5E+02 0.0086 26.0 8.9 68 68-140 17-89 (211)
236 3rih_A Short chain dehydrogena 27.3 1.7E+02 0.0058 27.5 7.9 90 50-142 37-129 (293)
237 1g8m_A Aicar transformylase-IM 27.3 85 0.0029 33.9 6.2 104 56-237 7-110 (593)
238 3sju_A Keto reductase; short-c 27.1 1.4E+02 0.0049 27.5 7.2 72 68-142 38-111 (279)
239 3uf0_A Short-chain dehydrogena 26.8 1.9E+02 0.0065 26.7 8.0 89 50-142 27-116 (273)
240 1z7e_A Protein aRNA; rossmann 26.8 82 0.0028 33.2 6.1 76 56-140 2-83 (660)
241 3ghf_A Septum site-determining 26.7 1.7E+02 0.0057 24.7 6.9 69 50-118 8-89 (120)
242 1qsg_A Enoyl-[acyl-carrier-pro 26.6 2.2E+02 0.0075 25.8 8.3 70 68-142 25-97 (265)
243 4b7c_A Probable oxidoreductase 26.6 3.7E+02 0.013 25.2 10.2 95 37-142 133-228 (336)
244 3grf_A Ornithine carbamoyltran 26.5 63 0.0021 32.2 4.8 49 270-318 227-294 (328)
245 2pnf_A 3-oxoacyl-[acyl-carrier 26.4 3.3E+02 0.011 23.8 9.8 88 51-141 4-94 (248)
246 3e03_A Short chain dehydrogena 26.4 2.6E+02 0.0087 25.6 8.8 72 69-142 21-100 (274)
247 2etx_A Mediator of DNA damage 26.4 78 0.0027 28.6 5.1 34 49-82 113-146 (209)
248 3tpf_A Otcase, ornithine carba 26.2 66 0.0023 31.7 4.8 49 270-318 207-273 (307)
249 2php_A Uncharacterized protein 26.0 75 0.0026 29.4 4.9 80 54-141 70-153 (192)
250 1c1d_A L-phenylalanine dehydro 25.9 66 0.0023 32.2 4.9 43 265-309 218-261 (355)
251 3ezl_A Acetoacetyl-COA reducta 25.9 2.6E+02 0.0088 25.0 8.5 91 49-141 8-100 (256)
252 3dqz_A Alpha-hydroxynitrIle ly 25.9 2.9E+02 0.01 23.3 8.6 71 78-148 4-91 (258)
253 1ssf_A Transformation related 25.9 22 0.00074 32.2 1.2 21 421-441 111-132 (156)
254 3i1j_A Oxidoreductase, short c 25.9 1.8E+02 0.0061 25.8 7.4 90 50-142 10-104 (247)
255 1mio_A Nitrogenase molybdenum 25.8 2.3E+02 0.008 29.7 9.3 35 51-86 332-366 (533)
256 3olc_X DNA topoisomerase 2-bin 25.8 2.5E+02 0.0086 27.0 8.9 68 48-123 196-273 (298)
257 1sb8_A WBPP; epimerase, 4-epim 25.8 1.2E+02 0.0042 28.4 6.6 90 43-142 16-112 (352)
258 3ged_A Short-chain dehydrogena 25.8 2.4E+02 0.0083 26.3 8.6 67 69-142 17-85 (247)
259 1hw6_A 2,5-diketo-D-gluconic a 25.7 1E+02 0.0034 29.1 5.9 54 54-110 133-188 (278)
260 1xg5_A ARPG836; short chain de 25.7 1.5E+02 0.0053 27.0 7.1 88 52-142 30-121 (279)
261 2r8e_A 3-deoxy-D-manno-octulos 25.6 2E+02 0.0069 24.7 7.5 75 64-143 55-130 (188)
262 1geg_A Acetoin reductase; SDR 25.6 1.9E+02 0.0067 26.0 7.7 71 69-142 17-89 (256)
263 3ln3_A Dihydrodiol dehydrogena 25.6 1.1E+02 0.0039 29.2 6.4 54 54-110 161-218 (324)
264 3vtz_A Glucose 1-dehydrogenase 25.5 3.7E+02 0.013 24.5 9.8 84 47-142 7-91 (269)
265 2fyw_A Conserved hypothetical 25.4 57 0.002 31.1 4.1 44 243-314 185-230 (267)
266 4da9_A Short-chain dehydrogena 25.3 1.2E+02 0.0041 28.1 6.3 90 51-142 26-117 (280)
267 3qwb_A Probable quinone oxidor 25.3 4.3E+02 0.015 24.8 10.9 95 37-142 132-227 (334)
268 3lab_A Putative KDPG (2-keto-3 25.1 1.9E+02 0.0067 27.0 7.6 68 37-118 53-126 (217)
269 3hn7_A UDP-N-acetylmuramate-L- 25.1 1.2E+02 0.004 31.5 6.8 56 49-107 14-69 (524)
270 3oid_A Enoyl-[acyl-carrier-pro 25.0 1.7E+02 0.0057 26.7 7.2 71 69-141 19-91 (258)
271 1np3_A Ketol-acid reductoisome 24.9 31 0.0011 33.6 2.2 49 264-312 59-110 (338)
272 3n0v_A Formyltetrahydrofolate 24.8 80 0.0027 30.6 5.1 57 77-140 116-174 (286)
273 1pqw_A Polyketide synthase; ro 24.8 3.3E+02 0.011 23.3 9.4 96 36-142 21-117 (198)
274 2uvd_A 3-oxoacyl-(acyl-carrier 24.7 1.8E+02 0.0061 26.0 7.2 71 69-142 19-92 (246)
275 1js1_X Transcarbamylase; alpha 24.6 1.6E+02 0.0054 29.3 7.2 61 39-107 155-220 (324)
276 3sty_A Methylketone synthase 1 24.6 2.9E+02 0.01 23.4 8.4 56 93-148 29-99 (267)
277 1ry2_A Acetyl-coenzyme A synth 24.6 1.6E+02 0.0054 31.1 7.8 55 53-109 138-192 (663)
278 1pg4_A Acetyl-COA synthetase; 24.6 1E+02 0.0035 32.4 6.3 54 53-108 131-184 (652)
279 3ipl_A 2-succinylbenzoate--COA 24.6 2.1E+02 0.0073 28.3 8.4 54 53-108 47-100 (501)
280 3u0b_A Oxidoreductase, short c 24.5 3.9E+02 0.013 27.0 10.4 91 49-142 208-298 (454)
281 3l5l_A Xenobiotic reductase A; 24.3 2E+02 0.0069 28.4 8.0 80 37-117 213-310 (363)
282 3f1l_A Uncharacterized oxidore 24.3 2.1E+02 0.007 25.9 7.6 90 50-142 8-102 (252)
283 3u5t_A 3-oxoacyl-[acyl-carrier 24.2 1.7E+02 0.0057 27.0 7.0 89 52-142 25-115 (267)
284 1gee_A Glucose 1-dehydrogenase 23.9 2E+02 0.0069 25.6 7.4 71 68-141 21-94 (261)
285 3qiv_A Short-chain dehydrogena 23.9 2E+02 0.007 25.6 7.5 90 50-142 5-96 (253)
286 3awd_A GOX2181, putative polyo 23.7 1.8E+02 0.0062 25.9 7.0 88 51-141 10-99 (260)
287 2p91_A Enoyl-[acyl-carrier-pro 23.6 3.4E+02 0.011 24.8 9.1 86 52-142 19-109 (285)
288 2r79_A Periplasmic binding pro 23.6 1.5E+02 0.0052 27.3 6.7 51 71-123 52-103 (283)
289 1ccw_A Protein (glutamate muta 23.5 2E+02 0.0067 24.3 6.8 26 96-121 105-130 (137)
290 3gaz_A Alcohol dehydrogenase s 23.5 4.2E+02 0.014 25.1 10.0 93 37-142 134-226 (343)
291 1duv_G Octase-1, ornithine tra 23.5 5.5E+02 0.019 25.4 20.4 66 49-116 39-112 (333)
292 3ngx_A Bifunctional protein fo 23.4 1.5E+02 0.0052 28.8 6.8 63 38-108 138-200 (276)
293 3pk0_A Short-chain dehydrogena 23.4 1.7E+02 0.0058 26.7 6.9 89 51-142 7-98 (262)
294 1pg5_A Aspartate carbamoyltran 23.3 98 0.0033 30.3 5.4 52 269-320 205-271 (299)
295 3lou_A Formyltetrahydrofolate 23.2 94 0.0032 30.3 5.3 57 77-140 121-179 (292)
296 1xk7_A Crotonobetainyl-COA:car 23.2 72 0.0024 32.5 4.6 35 50-85 13-47 (408)
297 2vns_A Metalloreductase steap3 23.2 39 0.0013 30.5 2.4 47 265-311 71-117 (215)
298 1s1p_A Aldo-keto reductase fam 23.1 1.2E+02 0.0041 29.3 6.0 54 54-110 160-217 (331)
299 3hn0_A Nitrate transport prote 23.1 70 0.0024 29.9 4.2 54 51-107 93-147 (283)
300 4dqx_A Probable oxidoreductase 23.0 4.4E+02 0.015 24.2 10.4 90 46-141 19-110 (277)
301 3oti_A CALG3; calicheamicin, T 22.9 2.4E+02 0.0081 26.9 8.1 49 55-111 21-74 (398)
302 3cxt_A Dehydrogenase with diff 22.9 2.8E+02 0.0096 25.8 8.4 88 51-141 31-120 (291)
303 1jr2_A Uroporphyrinogen-III sy 22.9 45 0.0015 31.4 2.8 37 47-83 14-53 (286)
304 4hp8_A 2-deoxy-D-gluconate 3-d 22.8 1.6E+02 0.0054 27.8 6.6 82 51-141 6-88 (247)
305 4fzr_A SSFS6; structural genom 22.8 91 0.0031 29.8 5.1 51 54-111 15-70 (398)
306 3sc4_A Short chain dehydrogena 22.7 3.1E+02 0.011 25.2 8.7 90 51-142 6-103 (285)
307 1vp5_A 2,5-diketo-D-gluconic a 22.7 1.5E+02 0.0051 28.5 6.5 55 54-111 146-202 (298)
308 3tjr_A Short chain dehydrogena 22.7 1.9E+02 0.0065 27.0 7.2 90 51-143 28-119 (301)
309 2wzm_A Aldo-keto reductase; ox 22.6 1.3E+02 0.0043 28.6 6.0 54 54-110 141-196 (283)
310 3ftp_A 3-oxoacyl-[acyl-carrier 22.6 1.4E+02 0.0048 27.5 6.2 90 50-142 24-115 (270)
311 3s55_A Putative short-chain de 22.4 2.1E+02 0.0071 26.2 7.3 89 51-141 7-108 (281)
312 3buv_A 3-OXO-5-beta-steroid 4- 22.4 1.3E+02 0.0045 28.9 6.2 53 55-110 164-220 (326)
313 3v2h_A D-beta-hydroxybutyrate 22.3 2.5E+02 0.0084 26.0 7.9 91 50-142 21-114 (281)
314 3edm_A Short chain dehydrogena 22.2 2.2E+02 0.0076 25.8 7.4 89 51-141 5-95 (259)
315 3h4t_A Glycosyltransferase GTF 22.2 2.6E+02 0.0088 27.1 8.3 41 66-112 16-56 (404)
316 3imf_A Short chain dehydrogena 22.1 2E+02 0.0067 26.1 7.0 71 68-141 20-92 (257)
317 3m6i_A L-arabinitol 4-dehydrog 22.1 2.3E+02 0.0078 27.1 7.8 85 51-142 177-262 (363)
318 1us0_A Aldose reductase; oxido 22.0 1.2E+02 0.0042 28.9 5.9 54 54-110 154-211 (316)
319 1afs_A 3-alpha-HSD, 3-alpha-hy 21.9 1.1E+02 0.0037 29.5 5.4 53 55-110 161-217 (323)
320 1v3u_A Leukotriene B4 12- hydr 21.9 4.9E+02 0.017 24.3 10.3 95 37-142 129-224 (333)
321 4ab4_A Xenobiotic reductase B; 21.8 93 0.0032 31.1 5.0 79 37-119 208-295 (362)
322 1aj0_A DHPS, dihydropteroate s 21.8 4.6E+02 0.016 25.2 9.9 97 32-143 75-190 (282)
323 4dup_A Quinone oxidoreductase; 21.8 3.8E+02 0.013 25.5 9.3 95 36-142 150-245 (353)
324 4ed9_A CAIB/BAIF family protei 21.7 84 0.0029 31.7 4.7 36 49-85 7-42 (385)
325 3v8b_A Putative dehydrogenase, 21.6 1.9E+02 0.0065 26.8 6.9 88 51-141 25-114 (283)
326 3ocu_A Lipoprotein E; hydrolas 21.4 1.3E+02 0.0044 28.9 5.8 109 63-193 102-217 (262)
327 1olt_A Oxygen-independent copr 21.4 2.8E+02 0.0097 27.9 8.7 76 50-126 103-200 (457)
328 1olt_A Oxygen-independent copr 21.4 2.3E+02 0.0078 28.7 7.9 75 54-128 139-233 (457)
329 1u7z_A Coenzyme A biosynthesis 21.3 4.6E+02 0.016 24.4 9.5 78 49-141 3-96 (226)
330 2o23_A HADH2 protein; HSD17B10 21.3 3.4E+02 0.012 24.0 8.4 87 51-142 9-96 (265)
331 4dll_A 2-hydroxy-3-oxopropiona 21.3 32 0.0011 33.1 1.5 49 265-313 74-128 (320)
332 3tsa_A SPNG, NDP-rhamnosyltran 21.2 3.3E+02 0.011 25.6 8.6 37 67-109 18-54 (391)
333 1fmc_A 7 alpha-hydroxysteroid 21.2 2.3E+02 0.0078 25.0 7.1 88 51-141 8-97 (255)
334 4e3z_A Putative oxidoreductase 21.0 2.5E+02 0.0084 25.5 7.5 73 68-142 40-114 (272)
335 3rix_A Luciferase, luciferin 4 21.0 2E+02 0.0069 29.1 7.5 55 53-109 74-128 (550)
336 3tr9_A Dihydropteroate synthas 21.0 4.9E+02 0.017 25.6 10.0 93 35-142 93-203 (314)
337 2nyd_A UPF0135 protein SA1388; 20.9 60 0.002 32.8 3.4 53 55-110 41-102 (370)
338 2d8a_A PH0655, probable L-thre 20.8 4.3E+02 0.015 25.0 9.5 91 37-141 153-245 (348)
339 3rkr_A Short chain oxidoreduct 20.8 2.6E+02 0.0088 25.3 7.5 90 50-142 25-116 (262)
340 1oth_A Protein (ornithine tran 20.7 1.3E+02 0.0046 29.7 5.8 53 266-318 211-281 (321)
341 2pd4_A Enoyl-[acyl-carrier-pro 20.7 3.7E+02 0.013 24.4 8.6 70 68-142 22-94 (275)
342 3ef1_A RNA polymerase II subun 20.5 2.5E+02 0.0086 29.1 8.0 67 48-122 349-429 (442)
343 1wa3_A 2-keto-3-deoxy-6-phosph 20.4 2.5E+02 0.0087 24.5 7.2 78 38-136 51-128 (205)
344 1edo_A Beta-keto acyl carrier 20.4 2.8E+02 0.0095 24.3 7.5 71 69-142 16-89 (244)
345 3gka_A N-ethylmaleimide reduct 20.3 1E+02 0.0036 30.7 5.0 78 38-119 217-303 (361)
346 3t5a_A Long-chain-fatty-acid-- 20.2 4.7E+02 0.016 25.4 9.8 66 43-111 72-140 (480)
347 3p2o_A Bifunctional protein fo 20.1 2E+02 0.0068 28.1 6.8 65 39-109 147-211 (285)
348 3lap_A Arginine repressor; arg 20.1 48 0.0016 30.1 2.3 22 85-106 30-51 (170)
No 1
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1e-149 Score=1163.27 Aligned_cols=422 Identities=61% Similarity=0.959 Sum_probs=407.8
Q ss_pred CcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCC
Q 013345 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91 (445)
Q Consensus 12 ~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~ST 91 (445)
++|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+|||||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~ST 82 (464)
T 3n58_A 3 GSMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFST 82 (464)
T ss_dssp --CEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CCccccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCCh
Q 013345 92 QDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN 171 (445)
Q Consensus 92 qd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~ 171 (445)
||||||||++.|||||||||+|.||||||++++|+|+++.+||+|||||||||.++|+|.++|++. +.++.| .|
T Consensus 83 qd~~aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~~~p~~ilDDGgDl~~~~h~~~~~~~~~---~~~~~~---~~ 156 (464)
T 3n58_A 83 QDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAEAGE---DVLSNP---QS 156 (464)
T ss_dssp CHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHHHHHHHHHHHTTC---CCSSSC---CS
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCCCCCCEEEECchHHHHHHHhhhhhhccc---ccCCCC---Cc
Confidence 999999999999999999999999999999999999887789999999999999999999999773 334444 47
Q ss_pred HHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHHHH
Q 013345 172 AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251 (445)
Q Consensus 172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~dg 251 (445)
+|+++|+..|++.++.+|++||+++++|+|+||||||||+||++|+++|.|+|||||||||+||++|||+|||+||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdg 236 (464)
T 3n58_A 157 EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDG 236 (464)
T ss_dssp HHHHHHHHHHHHHHHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcchhHHHHhhccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCCCCCCC
Q 013345 252 LMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTGNKDII 291 (445)
Q Consensus 252 i~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTGn~~vI 291 (445)
|+|+||++++ .|+||++++++++++.+||||++||++++|
T Consensus 237 I~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI 316 (464)
T 3n58_A 237 IRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVI 316 (464)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSB
T ss_pred HHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCcccc
Confidence 9999987776 589999999999999999999999999999
Q ss_pred CHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCccccch
Q 013345 292 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSC 371 (445)
Q Consensus 292 ~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVMd~ 371 (445)
+.+||++||+||||+|+|||++|||+++|.+ +++++|||||++|++|||| +||||+|||||||+|++|||+||||+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~---~~~~~ik~~v~~~~~~~g~-~i~lLaeGrlvNL~~a~GhP~~vm~~ 392 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPDGK-RLILLSEGRLLNLGNATGHPSFVMSA 392 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT---SEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHSCCSCHHHHHH
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh---CccccccCCeeEEEeCCCC-EEEEEeCCceecccCCCCChHHHHhH
Confidence 9999999999999999999999999999986 3888999999999999999 99999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCCCCC
Q 013345 372 SFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445 (445)
Q Consensus 372 sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~~y~y 445 (445)
||++|+|||+|||++++ +|++|||.||+++||+||++||++||++||+||+||++||++|++||||||||||
T Consensus 393 sf~~Q~la~~~l~~~~~--~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~~~~~gp~k~~~yry 464 (464)
T 3n58_A 393 SFTNQVLGQIELFTRTD--AYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464 (464)
T ss_dssp HHHHHHHHHHHHHHSGG--GCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHhCcc--ccCCCeeECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcCCCCCCCCCCccCCC
Confidence 99999999999999987 8999999999999999999999999999999999999999999999999999999
No 2
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=100.00 E-value=1.2e-136 Score=1075.88 Aligned_cols=444 Identities=91% Similarity=1.412 Sum_probs=430.6
Q ss_pred CchhhcccCCCCcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCE
Q 013345 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE 80 (445)
Q Consensus 1 ~~~~~~~~~~~~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAe 80 (445)
|++.+++++...+|+||||+||++||++|+||++|||+||++|++|+++|||||+||++|||||+|||+|+|||+++|||
T Consensus 4 ~~~~~~~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~ 83 (488)
T 3ond_A 4 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE 83 (488)
T ss_dssp CCCCCEECTTSCEEEESCGGGHHHHHHHHHHHHHTCHHHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCE
T ss_pred ccchhcccCCCCcccccChhhhHHhhHHHHHHHhhCHHHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCe
Confidence 56567888998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhc
Q 013345 81 VRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKT 160 (445)
Q Consensus 81 V~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~ 160 (445)
|+|||||||||||||||||++.|||||||||+|.||||||++++|+|+++.+||+||||||||+.++|+|.++|.+++..
T Consensus 84 v~~~~~n~~stqd~~aaa~~~~g~~v~a~~ge~~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~h~~~~~~~~~~~~ 163 (488)
T 3ond_A 84 VRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKS 163 (488)
T ss_dssp EEEECSSTTCCCHHHHHHHHHHTCEEEECTTCCHHHHHHHHHHHHCCCTTCCCSEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHhcccCCCCCEEEECchHHHHHHHcchhhhcchhhc
Confidence 99999999999999999999999999999999999999999999999877789999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccc
Q 013345 161 GKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240 (445)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN 240 (445)
+.+|+|...+|+|+++|+.+|++.++++|.+||+++++++|+||||||||+||++|+++|.|.|||||||||++|++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn 243 (488)
T 3ond_A 164 GQFPDPDSTDNAEFKIVLSIIKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 243 (488)
T ss_dssp CCCCCGGGCCCHHHHHHHHHHHHHHTTCTTHHHHHHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHH
T ss_pred cccCCCCCCCchHHHHHHHHHHHHHhhCcchhHHHHhhcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCE
Q 013345 241 LYGCRHSLPDGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADI 280 (445)
Q Consensus 241 ~yGtgqS~~dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDi 280 (445)
+|||+||++|+|+|+++++++ .++|+++..++++++.+|+
T Consensus 244 ~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDv 323 (488)
T 3ond_A 244 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADI 323 (488)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSE
T ss_pred hccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCE
Confidence 999999999999999987554 5889999999999999999
Q ss_pred EEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecC-CCceEEEEeCCccCCCC
Q 013345 281 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE-TNSGIIVLAEGRLMNLG 359 (445)
Q Consensus 281 fVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpd-Gr~~i~LLaeGrlvNL~ 359 (445)
||++||+.++|+.++|+.||+|++|+|+||++.||++..+..+..+.+.++++++..|.+++ |+ .+.+|++||+||++
T Consensus 324 Vi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~-aI~lLaeGRIVNls 402 (488)
T 3ond_A 324 FVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNT-GIIILAEGRLMNLG 402 (488)
T ss_dssp EEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHHH
T ss_pred EEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHH-HHHHHcCCcEEEEe
Confidence 99999999999999999999999999999999999999998876657788999999999999 99 99999999999999
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCC
Q 013345 360 CATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYK 439 (445)
Q Consensus 360 ~a~GhP~eVMd~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k 439 (445)
|..|||++|||+||++|+|||+|||++++.++|++|||+||+++||+||++||++||++||+||+||++||++|++||||
T Consensus 403 S~~G~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~~gv~~lp~~ld~~vA~l~l~~~g~~l~~lt~~q~~y~~~~~~g~~k 482 (488)
T 3ond_A 403 CATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYK 482 (488)
T ss_dssp HSCCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHTTCCTTSCCS
T ss_pred cCcccCcccccccHHHHHHHHHHHHhCCCccccCCCceeCCHHHHHHHHHHhchhcCCchhhcCHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999975457999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 013345 440 PLHYRY 445 (445)
Q Consensus 440 ~~~y~y 445 (445)
||||||
T Consensus 483 ~~~~~y 488 (488)
T 3ond_A 483 PFHYRY 488 (488)
T ss_dssp CTTCCC
T ss_pred ccCCCC
Confidence 999999
No 3
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=100.00 E-value=1.9e-136 Score=1061.66 Aligned_cols=390 Identities=64% Similarity=1.051 Sum_probs=378.3
Q ss_pred cceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh
Q 013345 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (445)
Q Consensus 13 ~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq 92 (445)
+|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||||||||||
T Consensus 2 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stq 81 (436)
T 3h9u_A 2 MYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQ 81 (436)
T ss_dssp -CEESCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCC
T ss_pred CccccChhhhHhhhHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHH-hcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCCh
Q 013345 93 DHAAAAIARDSASVFAWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN 171 (445)
Q Consensus 93 d~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l-~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~ 171 (445)
|||||||++.||+||||||+|.||||||++++| +|+++.+||+||||||||+.++|
T Consensus 82 d~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~h----------------------- 138 (436)
T 3h9u_A 82 DHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVL----------------------- 138 (436)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHH-----------------------
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHHHHH-----------------------
Confidence 999999999999999999999999999999999 99877789999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHHHH
Q 013345 172 AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251 (445)
Q Consensus 172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~dg 251 (445)
++||+++++|+|+||||||||+||++|.++|.|.|||||||||++|++|||.|||+||++|+
T Consensus 139 ------------------~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldg 200 (436)
T 3h9u_A 139 ------------------DECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG 200 (436)
T ss_dssp ------------------HHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred ------------------HHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCCCCCCC
Q 013345 252 LMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTGNKDII 291 (445)
Q Consensus 252 i~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTGn~~vI 291 (445)
|+|+++..++ .++||++++++++++.+||||+++|++++|
T Consensus 201 i~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI 280 (436)
T 3h9u_A 201 IKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDII 280 (436)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSB
T ss_pred HHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCcc
Confidence 9999987665 589999999999999999999999999999
Q ss_pred CHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCccccch
Q 013345 292 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSC 371 (445)
Q Consensus 292 ~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVMd~ 371 (445)
+.++|++||+|+||+|+||+++|||+++|.+.+. ++.++|++|++|++|||+ +|+||++||||||+|++|||+||||+
T Consensus 281 ~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~-~~~~ir~~vd~y~~~dg~-~I~LLaeGrLvNl~~~~Ghp~~vm~~ 358 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAK-ERVEVKPQVDRYTMANGR-HIILLAEGRLVNLGCASGHPSFVMSN 358 (436)
T ss_dssp CTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCS-EEEEEETTEEEEECTTSC-EEEEEGGGSCHHHHHSCCSCHHHHHH
T ss_pred CHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcC-ceEeecCCceEEEcCCCC-EEEEecCCCeecccCCCCChHHHhhH
Confidence 9999999999999999999999999999998766 888999999999999999 99999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCc----eeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCCCCC
Q 013345 372 SFTNQVIAQLELWKEKSTGKYEKK----VYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445 (445)
Q Consensus 372 sFa~Q~La~~~L~~~~~~g~~~~g----V~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~~y~y 445 (445)
||++|+||++|||++++.|+|++| ||.||+++||+||++||++||++||+||+||++||++|++||||||||||
T Consensus 359 sf~~q~la~~~l~~~~~~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~~~~~~~ 436 (436)
T 3h9u_A 359 SFCNQVLAQIELWTNRDTGKYPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436 (436)
T ss_dssp HHHHHHHHHHHHHHTTTTTSSCC---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTTSCTTCCCSCTTCCC
T ss_pred HHHHHHHHHHHHHhCCCcccCCCCCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCcccCCC
Confidence 999999999999999765689999 99999999999999999999999999999999999999999999999999
No 4
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=100.00 E-value=2.4e-134 Score=1044.71 Aligned_cols=389 Identities=49% Similarity=0.859 Sum_probs=373.1
Q ss_pred ccCCCCcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeec
Q 013345 7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSC 86 (445)
Q Consensus 7 ~~~~~~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~ 86 (445)
.|..+++|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||||
T Consensus 7 ~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~ 86 (435)
T 3gvp_A 7 NSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAAC 86 (435)
T ss_dssp CTTSCCCSBCSCGGGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCccccChhhhHHhHHHHHHHHHhCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEec
Confidence 45666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCC
Q 013345 87 NIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDP 166 (445)
Q Consensus 87 np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~ 166 (445)
|||||||||||||++.||+||||||+|.||||||++++|+|. +.+|++||||||||+.++|
T Consensus 87 n~~stqd~~aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~~-~~~p~~ilDdGgdl~~~~h------------------ 147 (435)
T 3gvp_A 87 NIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVE-GWQPNMILDDGGDLTHWIY------------------ 147 (435)
T ss_dssp SSSCCCHHHHHHHHHHTCCEECCTTCCHHHHHHHHHHHHCBT-TBCCSEEEESSSHHHHHHH------------------
T ss_pred CCCcChHHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcc-CCCCcEEEecchHHHHHHH------------------
Confidence 999999999999999999999999999999999999999874 3479999999999999999
Q ss_pred CCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccC
Q 013345 167 ASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRH 246 (445)
Q Consensus 167 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgq 246 (445)
++||+++++|+|+||||||||+||++|+++|.|.|||||||||+||++|||+|||++
T Consensus 148 -----------------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~ 204 (435)
T 3gvp_A 148 -----------------------KKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRE 204 (435)
T ss_dssp -----------------------HHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHH
T ss_pred -----------------------HHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHH
Confidence 899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCC
Q 013345 247 SLPDGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTG 286 (445)
Q Consensus 247 S~~dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTG 286 (445)
|+++||+|+|+++++ .|+||++++++++++.+|+||+|||
T Consensus 205 s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atg 284 (435)
T 3gvp_A 205 SILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTG 284 (435)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCC
Confidence 999999999987665 5899999999999999999999999
Q ss_pred CCCCCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCc
Q 013345 287 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPS 366 (445)
Q Consensus 287 n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~ 366 (445)
++++|+.++|++||+|+||+|+||++.|||+++|..... ++.++|+++++|.+|||+ +|+||++||||||+|+ |||+
T Consensus 285 t~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~-~~~~ir~~v~~y~~~dg~-~I~LLAeGrLvNl~~~-~hp~ 361 (435)
T 3gvp_A 285 NKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPEL-TWERVRSQVDHVIWPDGK-RIVLLAEGRLLNLSCS-TVPT 361 (435)
T ss_dssp CSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTC-EEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHC-CCCH
T ss_pred CcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcc-eeEEEEcCeeeEEcCCCc-EEEEecCCCEeeecCC-CCcH
Confidence 999999999999999999999999999999999976554 888999999999999999 9999999999999999 5999
Q ss_pred cccchhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCC
Q 013345 367 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPL 441 (445)
Q Consensus 367 eVMd~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~ 441 (445)
||||+||++|+||++|||+++. ++|+++||.||+++||+||++||++||++||+||+||++||++|++||||||
T Consensus 362 ~vm~~sf~~q~la~~~l~~~~~-~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~k~~ 435 (435)
T 3gvp_A 362 FVLSITATTQALALIELYNAPE-GRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPN 435 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TTSCSSEEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHTCCTTCCCSCC
T ss_pred HHHhHHHHHHHHHHHHHHhCcc-cccCCCeeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcCCCCCCCCCCC
Confidence 9999999999999999999962 2899999999999999999999999999999999999999999999999997
No 5
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=5.8e-109 Score=865.91 Aligned_cols=432 Identities=59% Similarity=1.028 Sum_probs=408.3
Q ss_pred cceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh
Q 013345 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (445)
Q Consensus 13 ~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq 92 (445)
+|+||||+||++||++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|++||+++||||+||||||||||
T Consensus 5 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stq 84 (479)
T 1v8b_A 5 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTA 84 (479)
T ss_dssp CCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CceecChhhhhHhHHHHHHHHhHCHHHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCch
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHhcCCC--CCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCC
Q 013345 93 DHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPG--GGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (445)
Q Consensus 93 d~vaaaL~~-~Gi~V~A~~g~t~eey~~~~~~~l~~~~~--~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~ 169 (445)
|||||||++ .||+||||||+|.||||||++++|+|+++ .+||+||||||||+.++|+|.++|+.|.-.+.+|+|...
T Consensus 85 d~~aaal~~~~gi~v~a~~g~~~~ey~~~~~~~l~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 1v8b_A 85 DYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKA 164 (479)
T ss_dssp HHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGC
T ss_pred HHHHHHHhhcCCceEEEeCCCCHHHHHHHHHHHhcCcccccCCCCEEEeccchHHHHHHcchhhhhccccccccCCcccc
Confidence 999999999 79999999999999999999999999653 369999999999999999999999986667899988765
Q ss_pred ChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHH
Q 013345 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (445)
Q Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~ 249 (445)
.+.++++||..|++.++.+|..||+++++++|++|||++|+.||.+|.++|.+.+|++++|+|+.+++|+|.||+++|++
T Consensus 165 ~~~~~~~~~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l~ 244 (479)
T 1v8b_A 165 KNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLP 244 (479)
T ss_dssp SSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhhhcChhhHHHHhcCeEEEEEeeCccHhHHHHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHHh
Confidence 44445999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCCCCC
Q 013345 250 DGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTGNKD 289 (445)
Q Consensus 250 dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTGn~~ 289 (445)
+++.|.++..+. .++||++.+++++++.+|+||++|++++
T Consensus 245 ~gw~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~ 324 (479)
T 1v8b_A 245 DGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVD 324 (479)
T ss_dssp HHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSS
T ss_pred hhhhhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhh
Confidence 999888865443 4789999999999999999999999999
Q ss_pred CCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCcccc
Q 013345 290 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 369 (445)
Q Consensus 290 vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVM 369 (445)
+|+.++|++||+|+||+|+||++.|||.++|.++..+++..|++.++.|.+|+++ .+++|++||++|+.|++|||+++|
T Consensus 325 lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~a~lDv~plp~~~-~l~~l~~~nvv~tH~atghp~e~~ 403 (479)
T 1v8b_A 325 VIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGN-KIIVLARGRLLNLGCATGHPAFVM 403 (479)
T ss_dssp SBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHSSCCSCHHHH
T ss_pred hcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEeeeEEEEECCCCC-eeeEecCCCEEEEeccCCCCchhH
Confidence 9999999999999999999999999999999873334777899999999999999 999999999999988999999999
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCCCCC
Q 013345 370 SCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445 (445)
Q Consensus 370 d~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~~y~y 445 (445)
+.+|++|++++++++.++...+++++||.||+.+|++||++||++||+.|++||++|.+|+++..+||||||||||
T Consensus 404 ~~s~a~~~~~ni~~~~~g~~~~l~n~V~~lp~~~de~va~l~L~~lG~~l~~lt~~q~~yi~v~~~g~~~~~~~~~ 479 (479)
T 1v8b_A 404 SFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCcceEeCChhhHHHHHHHHHHHcCChHhhcChhhhhhEeeeeCCCCCcccCCC
Confidence 9999999999999998853115888999999999999999999999999999999999999999999999999999
No 6
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=100.00 E-value=2.3e-107 Score=856.93 Aligned_cols=426 Identities=61% Similarity=1.021 Sum_probs=404.7
Q ss_pred CcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCC
Q 013345 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91 (445)
Q Consensus 12 ~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~ST 91 (445)
.+|+||||+||++||++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|++||+++||||+|||||||||
T Consensus 18 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~st 97 (494)
T 3ce6_A 18 IDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 97 (494)
T ss_dssp EEEBCSCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CceeecChhhhHHhHHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhC---------CCeEEEecCCCHHHHHHHHHHHHhcCCCCCC-cEEecCcchhhHHhhhchhhhhhhhhcC
Q 013345 92 QDHAAAAIARD---------SASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTG 161 (445)
Q Consensus 92 qd~vaaaL~~~---------Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p-~lilDDGgdl~~~lh~g~~~~~~~~~~~ 161 (445)
||||||||++. ||+||||||||.||||||++++|+|+++.+| |+|+||||||+.++|+|.++|++ +
T Consensus 98 qd~~aaa~~~~~~~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~----~ 173 (494)
T 3ce6_A 98 QDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQYEKA----G 173 (494)
T ss_dssp CHHHHHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHCCSSTTSCCCEEEESSSHHHHHHHHHHHHHHH----T
T ss_pred hHHHHHHHhhhccccccCCCCeEEEEeCCCCHHHHHHHHHHHHhccccCCCceEEeecchHHHHHHHcchhhhcc----c
Confidence 99999999999 9999999999999999999999999754246 99999999999999999999994 8
Q ss_pred CCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeeccccccccccc
Q 013345 162 KLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNL 241 (445)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~ 241 (445)
.+|+|...+++++++|+..|++.++++|..||++++.+.|++|||++||+|+++|.+.|.+.+|++++|||++|++|||.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~i~GvveetgtGVd~l~a~~~~Gilv~~~~~vn~sVae~~~r~l 253 (494)
T 3ce6_A 174 VVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNK 253 (494)
T ss_dssp SCCCCCTTSCHHHHHHHHHHHHHHHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHH
T ss_pred ccCCcccCchHHHHHHHHHHHHHhhcCcccchhhhcCeEEEEEEeCCChhHHHHHHHcCCEEEecCCccHHHHHHHHhhh
Confidence 99999988899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEE
Q 013345 242 YGCRHSLPDGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIF 281 (445)
Q Consensus 242 yGtgqS~~dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDif 281 (445)
|+|++|+++++.|+++.+++ .+.|+++.+++++++.+|+|
T Consensus 254 ~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvV 333 (494)
T 3ce6_A 254 YGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIV 333 (494)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEE
T ss_pred hhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEE
Confidence 99999999999998864333 46899988999999999999
Q ss_pred EecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecC-CCceEEEEeCCccCCCCC
Q 013345 282 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE-TNSGIIVLAEGRLMNLGC 360 (445)
Q Consensus 282 VTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpd-Gr~~i~LLaeGrlvNL~~ 360 (445)
|++||+.++|..++|+.||+|++|+|+|+++.|||...|...+ ++...+++.++.|.+|+ ++ .+.+|++||++||.|
T Consensus 334 i~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~a-L~~~~I~~~ldv~~~~~~~~-~l~LL~~grlvnL~~ 411 (494)
T 3ce6_A 334 VTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSG-ATRVNVKPQVDLWTFGDTGR-SIIVLSEGRLLNLGN 411 (494)
T ss_dssp EECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTT-CEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHHHH
T ss_pred EECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhh-hccceEEEEEEEeecCCcch-HHHHHhCCCEEeccC
Confidence 9999999999999999999999999999999999999886532 25567888899999988 89 999999999999999
Q ss_pred CCCCCccccchhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCC
Q 013345 361 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 440 (445)
Q Consensus 361 a~GhP~eVMd~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~ 440 (445)
.++||+.+|+.+|+.|++.+++++.++. .+.+.|+.+|+++|+.||++||.+||++|++||++|++||++..+|||||
T Consensus 412 ~TPH~a~~~~~s~~~qa~~ai~~~~~g~--~~~~~V~~~P~~~De~vA~lhL~~lg~~l~~lt~~q~~y~~v~~~G~~k~ 489 (494)
T 3ce6_A 412 ATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKP 489 (494)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHTGG--GCCSSEECCCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHTCCTTSCCSC
T ss_pred CCCCccccchHHHHHHHHHHHHHHHcCC--CCCCEEEECHHHHHHHHHHhhHHHHHHHHHHhChhHHHHcccccCCCCCc
Confidence 9999999999999999999999999876 78889999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 013345 441 LHYRY 445 (445)
Q Consensus 441 ~~y~y 445 (445)
|||||
T Consensus 490 ~~~~~ 494 (494)
T 3ce6_A 490 DHYRY 494 (494)
T ss_dssp TTCCC
T ss_pred ccCCC
Confidence 99999
No 7
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=3.4e-103 Score=824.90 Aligned_cols=433 Identities=58% Similarity=0.927 Sum_probs=402.5
Q ss_pred CchhhcccCCCCcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCE
Q 013345 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE 80 (445)
Q Consensus 1 ~~~~~~~~~~~~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAe 80 (445)
|+-.|-.+.+..+|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|+|+|+||++|++||+++||+
T Consensus 22 ~~~~~~~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~ri~~~lh~~~~ta~li~tL~~~GA~ 101 (494)
T 3d64_A 22 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGAD 101 (494)
T ss_dssp -----------CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCE
T ss_pred hHHHHHhccCCCCceecchhhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEeCCcHHHHHHHHHHHhCCCE
Confidence 33445555556689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhc
Q 013345 81 VRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKT 160 (445)
Q Consensus 81 V~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~ 160 (445)
|+|+||||||||||+||||++.||+||||||+|.+|||||++++|+|+++.+|++|+|||||++..+|+|.++|++ .
T Consensus 102 V~~~~~n~~stqd~~aaal~~~gi~v~a~kget~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~~~~~~~~~~---~ 178 (494)
T 3d64_A 102 VRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKD---R 178 (494)
T ss_dssp EEEECSSSSCCCHHHHHHHHHTTCCEECCTTCCHHHHHHHHHHTTCCSTTCCCCEEEESSSHHHHHHHHHHHHHHC---G
T ss_pred EEEEecCCcccchHHHHHHHhCCceEEEecCCCHHHHHHHHHHHhccccCCCCceeecCCcceeehhhccchhhcc---c
Confidence 9999999999999999999999999999999999999999999999977668999999999999999999999985 3
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccc
Q 013345 161 GKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240 (445)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN 240 (445)
+.++.|. +.+++++|..|.+.++++|..||+++++++|++|||++|+.||.+|.++|.+.+|+++||+|+.+++|+|
T Consensus 179 ~~~~~~~---~~~~~~l~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~vn~sVae~l~r~ 255 (494)
T 3d64_A 179 SVIARPT---NEEEVALFKSIERHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDN 255 (494)
T ss_dssp GGGTCCC---SHHHHHHHHHHHHHHTTCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHH
T ss_pred cccCCcc---chhHHHHHHHHHHhhccChHhHHHHhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCCccHHHHHHHHhh
Confidence 6667665 3445999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCE
Q 013345 241 LYGCRHSLPDGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADI 280 (445)
Q Consensus 241 ~yGtgqS~~dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDi 280 (445)
.||+++|++++++|.++..++ .++||++.+++++++.+|+
T Consensus 256 ~~~~~~~l~~gw~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDi 335 (494)
T 3d64_A 256 LYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADI 335 (494)
T ss_dssp HHHHHTTHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSE
T ss_pred hHhhhhhhhhhhhhccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCE
Confidence 999999999999888875444 4779999999999999999
Q ss_pred EEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCC
Q 013345 281 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC 360 (445)
Q Consensus 281 fVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~ 360 (445)
||++|+++++|+.++|++||+|+||+|+|+++.|||.++| + + +++..|++.++.|.+|+++ .+++|++||+||+.+
T Consensus 336 Vi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~-A-L~~g~I~~~~Dv~plp~~~-pL~~l~~~nvv~tH~ 411 (494)
T 3d64_A 336 FVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-R-Q-YQWENIKPQVDHIIFPDGK-RVILLAEGRLVNLGC 411 (494)
T ss_dssp EEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-T-T-SEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHT
T ss_pred EEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-H-h-hhcCccceeEEEEECCCCC-chhhcCCCCEEEEeC
Confidence 9999999999999999999999999999999999999999 4 3 3677889999999999999 999999999999988
Q ss_pred CCCCCccccchhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCC
Q 013345 361 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 440 (445)
Q Consensus 361 a~GhP~eVMd~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~ 440 (445)
++|||+++|+.+|++|++++++++.++. ++++.|+.||+++|++||++||++||+.|++||++|.+|+++..+|||||
T Consensus 412 atg~~~~~~~~~~a~~~~~ni~~~~~g~--~~~n~V~~lp~~~d~~va~l~L~~~g~~~~~l~~~q~~y~~v~~~g~~~~ 489 (494)
T 3d64_A 412 ATGHPSFVMSNSFTNQTLAQIELFTRGG--EYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKP 489 (494)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHGG--GSCSSEEECCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTCCTTSCCSC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCC--CCCCceeeCChhHHHHHHHHHHHHcCChHHhhChhhHHhEeeccCCCCCc
Confidence 9999999999999999999999999887 89999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 013345 441 LHYRY 445 (445)
Q Consensus 441 ~~y~y 445 (445)
|||||
T Consensus 490 ~~~~~ 494 (494)
T 3d64_A 490 DHYRY 494 (494)
T ss_dssp TTCCC
T ss_pred ccCCC
Confidence 99999
No 8
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.27 E-value=0.022 Score=56.06 Aligned_cols=41 Identities=12% Similarity=0.265 Sum_probs=36.8
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCC
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
...+.++++.|||+|+|||.++.|+.+++ |.|+++.++|.-
T Consensus 184 t~~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvgi~ 224 (276)
T 3ngx_A 184 TKDIGSMTRSSKIVVVAVGRPGFLNREMV---TPGSVVIDVGIN 224 (276)
T ss_dssp CSCHHHHHHHSSEEEECSSCTTCBCGGGC---CTTCEEEECCCE
T ss_pred cccHHHhhccCCEEEECCCCCccccHhhc---cCCcEEEEeccC
Confidence 45689999999999999999999998764 999999999964
No 9
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.25 E-value=0.039 Score=55.11 Aligned_cols=55 Identities=18% Similarity=0.301 Sum_probs=45.2
Q ss_pred CcceecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|++...++++++.+|+++.++- ..++|..+.|.+||+|+||.|+|.... +|-.+|
T Consensus 182 g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~-vd~~aL 240 (334)
T 2pi1_A 182 GCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKV-VDTDAL 240 (334)
T ss_dssp TCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGG-BCHHHH
T ss_pred CceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcc-cCHHHH
Confidence 6667779999999999999865 557899999999999999999997654 444444
No 10
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.19 E-value=0.031 Score=55.24 Aligned_cols=44 Identities=27% Similarity=0.422 Sum_probs=38.4
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCccc
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNE 314 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~E 314 (445)
...+++.++.|||+|+|||..+.|+.+++ |.|+++.++|....|
T Consensus 195 T~~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvgi~~~~ 238 (286)
T 4a5o_A 195 TRDLADHVSRADLVVVAAGKPGLVKGEWI---KEGAIVIDVGINRQA 238 (286)
T ss_dssp CSCHHHHHHTCSEEEECCCCTTCBCGGGS---CTTCEEEECCSCSSC
T ss_pred CcCHHHHhccCCEEEECCCCCCCCCHHHc---CCCeEEEEecccccc
Confidence 34689999999999999999999998765 999999999976543
No 11
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.12 E-value=0.042 Score=54.83 Aligned_cols=56 Identities=18% Similarity=0.307 Sum_probs=46.4
Q ss_pred CCcceecHHHhhccCCEEEecC----CCCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 264 EGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 264 dGf~V~~l~eA~~~aDifVTaT----Gn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.|+...++++.++++|+++..+ -.++.|..+.|.+||+||+|.|+|-... ||-++|
T Consensus 181 ~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~i-Vde~aL 240 (334)
T 3kb6_A 181 KGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKV-VDTDAL 240 (334)
T ss_dssp TTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGG-BCHHHH
T ss_pred cCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcccc-ccHHHH
Confidence 3566678899999999999864 4568999999999999999999998765 665555
No 12
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.86 E-value=0.051 Score=55.60 Aligned_cols=56 Identities=20% Similarity=0.253 Sum_probs=46.2
Q ss_pred CCcceecHHHhhccCCEEEecCC--------CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 264 EGLQVLTLEDVLSDADIFVTTTG--------NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 264 dGf~V~~l~eA~~~aDifVTaTG--------n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
++....+++++++.+|+++.++- ..++|..+.|.+||.|+||.|+|-... ||-.+|
T Consensus 157 ~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v-vde~aL 220 (381)
T 3oet_A 157 DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPV-VDNAAL 220 (381)
T ss_dssp CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG-BCHHHH
T ss_pred cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcc-cCHHHH
Confidence 35566789999999999999885 667899999999999999999997665 454443
No 13
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=93.73 E-value=0.036 Score=54.75 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=37.6
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
...+.++++.|||+|+|||..+.|+.+++ |.|+++.++|....
T Consensus 194 t~~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 TKDLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVGINRL 236 (285)
T ss_dssp CSCHHHHHTTCSEEEECSSCTTCBCGGGS---CTTEEEEECCCEEC
T ss_pred chhHHHHhhcCCEEEECCCCCCcCCHHHc---CCCeEEEEeccCcc
Confidence 34689999999999999999999998764 89999999997543
No 14
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=93.70 E-value=0.052 Score=53.65 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=37.8
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
...++++++.|||+|+|||..+.|+.+++ |.|+++.++|....
T Consensus 195 t~~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvgi~~~ 237 (285)
T 3l07_A 195 TTDLKSHTTKADILIVAVGKPNFITADMV---KEGAVVIDVGINHV 237 (285)
T ss_dssp CSSHHHHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECCCEEE
T ss_pred chhHHHhcccCCEEEECCCCCCCCCHHHc---CCCcEEEEecccCc
Confidence 34689999999999999999999998764 89999999997653
No 15
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=93.48 E-value=0.063 Score=54.00 Aligned_cols=55 Identities=31% Similarity=0.406 Sum_probs=44.8
Q ss_pred Cccee-cHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVL-TLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~-~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|++.. +++++++.+|+++.++-. .++|..+.|.+||.|+||.|+|--.. +|-++|
T Consensus 214 g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~-vde~aL 273 (345)
T 4g2n_A 214 GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDL-INDDAL 273 (345)
T ss_dssp TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGG-BCHHHH
T ss_pred CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch-hCHHHH
Confidence 55555 899999999999999873 58899999999999999999997654 444444
No 16
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.42 E-value=0.069 Score=52.43 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=42.0
Q ss_pred CcceecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
|++..+++++++.+|+++.++- .+++|..+.|..||.|+++.|+|....
T Consensus 184 g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 184 NGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPV 236 (307)
T ss_dssp TCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred CccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence 5555678999999999999987 457788899999999999999998654
No 17
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=93.32 E-value=0.075 Score=53.95 Aligned_cols=57 Identities=25% Similarity=0.400 Sum_probs=44.6
Q ss_pred cCCcceecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 263 MEGLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 263 mdGf~V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
..|++..+++++++.+|+++.++- .+++|..+.|.+||+|++|.|+|.... +|-++|
T Consensus 216 ~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~-vde~aL 276 (365)
T 4hy3_A 216 ENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADV-VDFDAL 276 (365)
T ss_dssp HTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGG-SCHHHH
T ss_pred hcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCch-hCHHHH
Confidence 356777789999999999998754 457899999999999999999997665 554444
No 18
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.29 E-value=0.073 Score=53.49 Aligned_cols=54 Identities=28% Similarity=0.332 Sum_probs=44.2
Q ss_pred cceecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 266 LQVLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 266 f~V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.+..+++++++.+|+++.++-. .++|..+.|.+||.|++|.|+|.... +|-++|
T Consensus 189 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~-vd~~aL 246 (343)
T 2yq5_A 189 LTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGEL-VDTGAL 246 (343)
T ss_dssp CEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGG-BCHHHH
T ss_pred ccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChh-hhHHHH
Confidence 4445889999999999999873 68899999999999999999997665 444444
No 19
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=93.03 E-value=0.077 Score=52.81 Aligned_cols=55 Identities=11% Similarity=0.245 Sum_probs=44.4
Q ss_pred CcceecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|++..+++++++.+|+++.++- ..++|..+.|..||.|++|.|+|.... +|-.+|
T Consensus 188 g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~-vd~~aL 246 (330)
T 4e5n_A 188 GLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV-VDEAAV 246 (330)
T ss_dssp TEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG-BCHHHH
T ss_pred CceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch-hCHHHH
Confidence 5556689999999999999875 457899999999999999999997654 343333
No 20
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.93 E-value=0.088 Score=52.98 Aligned_cols=51 Identities=20% Similarity=0.399 Sum_probs=43.0
Q ss_pred cCCccee-cHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 263 MEGLQVL-TLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 263 mdGf~V~-~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
..|++.. +++++++.+|+++.++- .+++|..+.|.+||.|++|.|+|-...
T Consensus 200 ~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 255 (352)
T 3gg9_A 200 ADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAEL 255 (352)
T ss_dssp HTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred hcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence 4577766 89999999999999864 457889999999999999999996544
No 21
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.79 E-value=0.11 Score=52.34 Aligned_cols=55 Identities=15% Similarity=0.321 Sum_probs=44.2
Q ss_pred Cccee-cHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVL-TLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~-~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|++.. +++++++.+|+++.++- ..++|..+.|.+||.|++|.|+|-... +|-++|
T Consensus 207 g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL 266 (351)
T 3jtm_A 207 GAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAI-MERQAV 266 (351)
T ss_dssp CCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGG-BCHHHH
T ss_pred CCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchh-hCHHHH
Confidence 55544 79999999999999876 457899999999999999999997654 444444
No 22
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.67 E-value=0.1 Score=53.27 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=44.2
Q ss_pred CcceecHHHhhccCCEEEecCC--------CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTG--------NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTG--------n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|....+++++++.+|+|+.++- ..++|+.+.|.+||.|++|.|+|.... +|-.+|
T Consensus 155 g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~v-vd~~aL 217 (380)
T 2o4c_A 155 DGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAV-VDNQAL 217 (380)
T ss_dssp TSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGG-BCHHHH
T ss_pred CcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcc-cCHHHH
Confidence 4445688999999999999875 567899999999999999999997654 443433
No 23
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.52 E-value=0.11 Score=51.15 Aligned_cols=56 Identities=23% Similarity=0.340 Sum_probs=44.8
Q ss_pred CCcceecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 264 EGLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 264 dGf~V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.|+...+++++++.+|+++.++- ..++|..+.+..||.|+++.|+|.... +|-..|
T Consensus 183 ~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~-vd~~aL 242 (313)
T 2ekl_A 183 INAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVA-VNGKAL 242 (313)
T ss_dssp TTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGG-BCHHHH
T ss_pred cCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcc-cCHHHH
Confidence 35555688999999999999987 557788899999999999999998554 444444
No 24
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.49 E-value=0.11 Score=53.34 Aligned_cols=54 Identities=24% Similarity=0.306 Sum_probs=45.1
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCccccccccccc
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLET 322 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~ 322 (445)
..+++|+++.+|+||.+|+ +.++|.|.++.|+.+.|+.-...-.-||..+...+
T Consensus 254 ~~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~ 307 (388)
T 1vl6_A 254 SGDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPELARE 307 (388)
T ss_dssp CSCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHH
T ss_pred hhhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHH
Confidence 4579999999999999999 79999999999999999976666666777655443
No 25
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=92.46 E-value=0.07 Score=53.06 Aligned_cols=39 Identities=28% Similarity=0.450 Sum_probs=34.9
Q ss_pred cHH--HhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCC
Q 013345 270 TLE--DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 270 ~l~--eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
.++ ++++.|||+|+|||..+.|+.++ +|.|+++.++|.-
T Consensus 201 ~l~l~~~~~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvgi~ 241 (300)
T 4a26_A 201 TEDMIDYLRTADIVIAAMGQPGYVKGEW---IKEGAAVVDVGTT 241 (300)
T ss_dssp HHHHHHHHHTCSEEEECSCCTTCBCGGG---SCTTCEEEECCCE
T ss_pred CchhhhhhccCCEEEECCCCCCCCcHHh---cCCCcEEEEEecc
Confidence 466 99999999999999999999876 4999999999963
No 26
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.34 E-value=0.15 Score=49.25 Aligned_cols=48 Identities=17% Similarity=0.261 Sum_probs=41.4
Q ss_pred ecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccc
Q 013345 269 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 317 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~ 317 (445)
..++++++.+|++|.+|.. +.++.+.+..||.|+++.|++....++++
T Consensus 207 ~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~mk~g~~lin~a~g~~~~~~ 254 (300)
T 2rir_A 207 DELKEHVKDIDICINTIPS-MILNQTVLSSMTPKTLILDLASRPGGTDF 254 (300)
T ss_dssp GGHHHHSTTCSEEEECCSS-CCBCHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred hhHHHHhhCCCEEEECCCh-hhhCHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence 3578899999999999998 67899999999999999999976655554
No 27
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.24 E-value=0.14 Score=51.04 Aligned_cols=56 Identities=21% Similarity=0.213 Sum_probs=44.2
Q ss_pred CCcceecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 264 EGLQVLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 264 dGf~V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.|++..+++++++.+|+++.++-. +++|..+.|+.||.|++|.|+|.... +|-.+|
T Consensus 206 ~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~v-vd~~aL 265 (335)
T 2g76_A 206 FGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGI-VDEGAL 265 (335)
T ss_dssp TTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTS-BCHHHH
T ss_pred cCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccc-cCHHHH
Confidence 355556889999999999999764 46788899999999999999998654 443333
No 28
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=91.82 E-value=0.15 Score=50.37 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=40.3
Q ss_pred Cccee-cHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 265 GLQVL-TLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 265 Gf~V~-~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
|.+.. +++++++.+|+++.++- ..++|..+.++.||.|++|.|+|...
T Consensus 189 g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 189 QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCc
Confidence 44445 78999999999999987 34678888999999999999999864
No 29
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=91.78 E-value=0.15 Score=50.05 Aligned_cols=46 Identities=22% Similarity=0.391 Sum_probs=39.1
Q ss_pred eecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 268 VLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
..+++++++.+|+++.++- ..++|..+.+..||.|+++.|+|....
T Consensus 165 ~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~ 214 (303)
T 1qp8_A 165 TNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEV 214 (303)
T ss_dssp BSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred CCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence 3467899999999999973 456888899999999999999998543
No 30
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.75 E-value=0.21 Score=48.12 Aligned_cols=47 Identities=15% Similarity=0.278 Sum_probs=40.9
Q ss_pred cHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccc
Q 013345 270 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 317 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~ 317 (445)
.++++++.+|++|.++.. +.+..+.++.||.|+++.|++....++++
T Consensus 206 ~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~~~~~ 252 (293)
T 3d4o_A 206 KAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTFVIDLASKPGGTDF 252 (293)
T ss_dssp GHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTCSBCH
T ss_pred hHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCCCCCH
Confidence 578889999999999976 77899999999999999999976666654
No 31
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.71 E-value=0.16 Score=53.58 Aligned_cols=55 Identities=25% Similarity=0.403 Sum_probs=45.1
Q ss_pred CcceecHHHhhccCCEEEecC----CCCCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 265 GLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaT----Gn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
|+...+++++++.+|+++.++ ...++|..+.+..||+|+++.|+|.... +|-..|
T Consensus 184 g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~i-v~~~aL 242 (529)
T 1ygy_A 184 GIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGL-VDEAAL 242 (529)
T ss_dssp TCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTS-BCHHHH
T ss_pred CcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCch-hhHHHH
Confidence 566668999999999999998 4568899889999999999999997654 454333
No 32
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=91.65 E-value=0.17 Score=49.89 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=36.6
Q ss_pred ecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 269 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
..+.+.++.|||+|+|||.++.|+.+++ |.|+++.++|.-.
T Consensus 195 ~~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVgi~r 235 (281)
T 2c2x_A 195 RDLPALTRQADIVVAAVGVAHLLTADMV---RPGAAVIDVGVSR 235 (281)
T ss_dssp SCHHHHHTTCSEEEECSCCTTCBCGGGS---CTTCEEEECCEEE
T ss_pred hHHHHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEccCCC
Confidence 3589999999999999999999999874 8899999999754
No 33
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=91.59 E-value=0.16 Score=51.16 Aligned_cols=50 Identities=18% Similarity=0.217 Sum_probs=41.5
Q ss_pred cHHHhhccCCEEEecCCCC----CCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 270 TLEDVLSDADIFVTTTGNK----DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~----~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
+++++++.+|+++.++-.. ++|..+.|..||.|++|.|+|.... +|-.+|
T Consensus 214 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~-vd~~aL 267 (364)
T 2j6i_A 214 NIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAI-CVAEDV 267 (364)
T ss_dssp SHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG-BCHHHH
T ss_pred CHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCch-hCHHHH
Confidence 7899999999999998765 7899999999999999999998643 343333
No 34
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.56 E-value=0.12 Score=51.43 Aligned_cols=52 Identities=19% Similarity=0.314 Sum_probs=41.8
Q ss_pred eecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 268 VLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
..+++++++.+|+++.++-. .++|..+.|..||+|++|.|+|.... +|-.+|
T Consensus 182 ~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vd~~aL 237 (324)
T 3evt_A 182 FTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPA-VDTTAL 237 (324)
T ss_dssp GGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGG-BCHHHH
T ss_pred cCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChh-hhHHHH
Confidence 45678999999999998643 57899999999999999999997654 443333
No 35
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.29 E-value=0.095 Score=52.26 Aligned_cols=48 Identities=23% Similarity=0.400 Sum_probs=40.4
Q ss_pred cceecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 266 LQVLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 266 f~V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
+...+++++++.+|+++.++-. .++|..+.|.+||.|++|.|+|-...
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~ 234 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNA 234 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence 3456789999999999998653 57888999999999999999997654
No 36
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=91.24 E-value=0.18 Score=50.66 Aligned_cols=50 Identities=26% Similarity=0.298 Sum_probs=41.1
Q ss_pred cHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 270 TLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
+++++++.+|+++.++-. +++|..+.|++||.|+++.|++.... +|..+|
T Consensus 216 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~-vd~~aL 269 (347)
T 1mx3_A 216 TLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGL-VDEKAL 269 (347)
T ss_dssp SHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTS-BCHHHH
T ss_pred CHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChH-HhHHHH
Confidence 789999999999998753 56888999999999999999998764 343444
No 37
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=91.17 E-value=0.2 Score=49.75 Aligned_cols=52 Identities=27% Similarity=0.326 Sum_probs=42.7
Q ss_pred ecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCcccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLE 321 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~ 321 (445)
.+++++++.+|+++.++.. +++|..+.|..||.|++|.|+|.... +|-.+|.
T Consensus 189 ~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~-vd~~aL~ 244 (333)
T 1dxy_A 189 VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNL-IDTQAML 244 (333)
T ss_dssp CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTS-BCHHHHH
T ss_pred CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcc-cCHHHHH
Confidence 4678999999999999874 46788999999999999999998654 5545443
No 38
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=91.00 E-value=0.17 Score=50.40 Aligned_cols=200 Identities=18% Similarity=0.096 Sum_probs=103.3
Q ss_pred HHHHHHHHHhCC------CEEEEeecCCCCCh--HHHHHHHHhCCCeEEEec---CCCHHHHHHHHHHHHhcCCCCCCcE
Q 013345 67 TAVLIETLTALG------AEVRWCSCNIFSTQ--DHAAAAIARDSASVFAWK---GETLQEYWWCTEKALDWGPGGGPDL 135 (445)
Q Consensus 67 Ta~li~tL~a~G------AeV~~~~~np~STq--d~vaaaL~~~Gi~V~A~~---g~t~eey~~~~~~~l~~~~~~~p~l 135 (445)
..--++.|++.| --|...+.||-|.. .--..+..+-||...-++ ..|.+|....|++.-+- |++
T Consensus 20 ~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D-----~~V 94 (301)
T 1a4i_A 20 LKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNED-----STV 94 (301)
T ss_dssp HHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCC-----CCC
Confidence 334455565543 23556677774321 111222233488866553 45677877777664331 321
Q ss_pred EecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhcccc-----chhHHHH
Q 013345 136 IVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVS-----EETTTGV 210 (445)
Q Consensus 136 ilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~-----EETTTGv 210 (445)
| ++.=.+|.|... +-|++.++..|...=+-|....-++-.-..|-. ==|..|+
T Consensus 95 ------------~---------GIlvqlPLP~~~-~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi 152 (301)
T 1a4i_A 95 ------------H---------GFLVQLPLDSEN-SINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGC 152 (301)
T ss_dssp ------------C---------EEEECSSCCCSS-CCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHH
T ss_pred ------------c---------EEEEeccCCCCC-ccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHH
Confidence 1 222234544321 245666666665555555444333322223321 1288998
Q ss_pred HHHHHHHHcCC--ccccEEEeecccccccccccccccCcHHHHHHh-hhchhhhhcCCcceecHHHhhccCCEEEecCCC
Q 013345 211 KRLYQMQENGT--LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR-ATDVMIALMEGLQVLTLEDVLSDADIFVTTTGN 287 (445)
Q Consensus 211 ~Rl~~m~~~g~--L~~Pvi~VNdS~tK~~fDN~yGtgqS~~dgi~R-~Tn~lia~mdGf~V~~l~eA~~~aDifVTaTGn 287 (445)
.+|-+ +.+. -.--|+-|..|.+ +|..+..-+++ ...+.+++ -....+.+.++.|||+|+|+|.
T Consensus 153 ~~ll~--~~~i~l~gk~vvVIG~s~i---------VG~p~A~lL~~~gAtVtv~h---s~t~~L~~~~~~ADIVI~Avg~ 218 (301)
T 1a4i_A 153 LELIK--ETGVPIAGRHAVVVGRSKI---------VGAPMHDLLLWNNATVTTCH---SKTAHLDEEVNKGDILVVATGQ 218 (301)
T ss_dssp HHHHH--TTTCCCTTCEEEEECCCTT---------THHHHHHHHHHTTCEEEEEC---TTCSSHHHHHTTCSEEEECCCC
T ss_pred HHHHH--HcCCCCCCCEEEEECCCch---------HHHHHHHHHHhCCCeEEEEE---CCcccHHHHhccCCEEEECCCC
Confidence 88754 2211 0111222222211 12222122221 11122222 1134589999999999999999
Q ss_pred CCCCCHHHHhcCcCCcEEeCCCC
Q 013345 288 KDIIMVDHMKKMKNNAIVCNIGH 310 (445)
Q Consensus 288 ~~vI~~eh~~~MKdgAILaN~Gh 310 (445)
.+.|+.++ +|.||++.++|.
T Consensus 219 p~~I~~~~---vk~GavVIDVgi 238 (301)
T 1a4i_A 219 PEMVKGEW---IKPGAIVIDCGI 238 (301)
T ss_dssp TTCBCGGG---SCTTCEEEECCC
T ss_pred cccCCHHH---cCCCcEEEEccC
Confidence 99999887 589999999995
No 39
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=90.71 E-value=0.19 Score=49.22 Aligned_cols=44 Identities=11% Similarity=0.261 Sum_probs=38.7
Q ss_pred cHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 270 TLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
+++++++.+|+++.++-. .++|..+.|+.||.|+++.|+|--..
T Consensus 166 ~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~ 213 (290)
T 3gvx_A 166 SPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADV 213 (290)
T ss_dssp SHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred ChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence 789999999999998874 57788999999999999999996553
No 40
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.69 E-value=0.24 Score=49.10 Aligned_cols=51 Identities=27% Similarity=0.431 Sum_probs=41.0
Q ss_pred ecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.+++++++.+|+++.++-. +++|+.+.|..||.|+++.|+|.... +|-.+|
T Consensus 190 ~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~-vd~~aL 244 (331)
T 1xdw_A 190 VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQL-VDTEAV 244 (331)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGG-BCHHHH
T ss_pred CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccc-ccHHHH
Confidence 4788999999999998553 57899999999999999999997543 443444
No 41
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=90.66 E-value=0.11 Score=51.37 Aligned_cols=40 Identities=28% Similarity=0.446 Sum_probs=35.8
Q ss_pred ecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCC
Q 013345 269 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
..+.+.++.|||+|+|+|..+.|+.++ +|.||++.++|.-
T Consensus 194 ~~L~~~~~~ADIVI~Avg~p~lI~~~~---vk~GavVIDVgi~ 233 (288)
T 1b0a_A 194 KNLRHHVENADLLIVAVGKPGFIPGDW---IKEGAIVIDVGIN 233 (288)
T ss_dssp SCHHHHHHHCSEEEECSCCTTCBCTTT---SCTTCEEEECCCE
T ss_pred hhHHHHhccCCEEEECCCCcCcCCHHH---cCCCcEEEEccCC
Confidence 358999999999999999999999887 4899999999954
No 42
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.51 E-value=0.14 Score=51.26 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=35.8
Q ss_pred ecHHHhhccCCEEEecCCCCCC-CCHHHHhcCcCCcEEeCCCCCc
Q 013345 269 LTLEDVLSDADIFVTTTGNKDI-IMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~v-I~~eh~~~MKdgAILaN~Ghfd 312 (445)
..+.++++.|||+|+|||.++. |+.++ +|.|+++.++|...
T Consensus 237 ~~L~e~l~~ADIVIsAtg~p~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 237 DLLKKCSLDSDVVITGVPSENYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHHCSEEEECCCCTTCCBCTTT---SCTTEEEEECSSSC
T ss_pred hHHHHHhccCCEEEECCCCCcceeCHHH---cCCCeEEEEcCCCc
Confidence 3588999999999999999986 99887 48999999999753
No 43
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.47 E-value=0.2 Score=50.27 Aligned_cols=52 Identities=17% Similarity=0.280 Sum_probs=34.4
Q ss_pred ecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLE 321 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~ 321 (445)
.+++++++.+|+++.++- .+++|..+.++.||.|+++.|++-... +|-.+|.
T Consensus 214 ~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~v-vde~aL~ 269 (340)
T 4dgs_A 214 QSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNV-VDEDALI 269 (340)
T ss_dssp SSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC----------
T ss_pred CCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcc-cCHHHHH
Confidence 478999999999999876 457889999999999999999998765 5555553
No 44
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.19 E-value=0.21 Score=49.47 Aligned_cols=45 Identities=16% Similarity=0.227 Sum_probs=38.5
Q ss_pred ecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 269 LTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
..++++++.+|+++.++- .+++|..+.|.+||.|+||.|+|-...
T Consensus 185 ~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~ 233 (315)
T 3pp8_A 185 EELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVH 233 (315)
T ss_dssp HHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred CCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence 367899999999999854 457899999999999999999997654
No 45
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=89.97 E-value=0.25 Score=48.98 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=42.2
Q ss_pred cHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcccccccccc
Q 013345 270 TLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLE 321 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~ 321 (445)
+++++++.+|+++.++. .+++|..+.|..||+|+++.|+|.... +|-.+|.
T Consensus 192 ~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~-vd~~aL~ 246 (333)
T 1j4a_A 192 SLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPL-VDTDAVI 246 (333)
T ss_dssp CHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGG-BCHHHHH
T ss_pred CHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcc-cCHHHHH
Confidence 68899999999999987 446788889999999999999998664 5545443
No 46
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=89.94 E-value=0.41 Score=47.68 Aligned_cols=213 Identities=19% Similarity=0.188 Sum_probs=107.5
Q ss_pred CCCcEEEeeeccchhHHHHHHHHHhC-C----CEEEEeecCCCCCh--HHHHHHHHhCCCeEEEe---cCCCHHHHHHHH
Q 013345 52 FKGAKITGSLHMTIQTAVLIETLTAL-G----AEVRWCSCNIFSTQ--DHAAAAIARDSASVFAW---KGETLQEYWWCT 121 (445)
Q Consensus 52 l~G~rI~~~lHlt~kTa~li~tL~a~-G----AeV~~~~~np~STq--d~vaaaL~~~Gi~V~A~---~g~t~eey~~~~ 121 (445)
|.|+.|+--+ ..+...-++.|++. | --|...+.||-|.. .--..+..+-|+...-+ ...|.+|....|
T Consensus 26 ldGk~iA~~i--~~~l~~~v~~l~~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I 103 (303)
T 4b4u_A 26 LDGRALAKQI--EENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEI 103 (303)
T ss_dssp CCHHHHHHHH--HHHHHHHHHHHHHHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHH
T ss_pred eehHHHHHHH--HHHHHHHHHHHHHcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHH
Confidence 4555544333 33334445556543 2 34677788884321 11122334458875433 344666777666
Q ss_pred HHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchhh---hhhh
Q 013345 122 EKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK---MKER 198 (445)
Q Consensus 122 ~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~ 198 (445)
++.-+ .|++ | ++.=.+|.|.. -|++.++..|...=+-|....-+ +..+
T Consensus 104 ~~LN~-----D~~V------------~---------GIlVQlPLP~h---id~~~i~~~I~p~KDVDG~hp~N~G~L~~g 154 (303)
T 4b4u_A 104 EKLNA-----NPDV------------H---------GILLQHPVPAQ---IDERACFDAISLAKDVDGVTCLGFGRMAMG 154 (303)
T ss_dssp HHHHT-----CTTC------------C---------EEEECSSCCTT---SCHHHHHHHSCGGGCTTCCCHHHHHHHHTT
T ss_pred HHhcC-----CCCc------------c---------EEEEeCCCccc---cChHHHHhccCcccccCccCcchHHHhcCC
Confidence 55432 1221 1 22223454432 34555666665544444433222 2222
Q ss_pred hccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHHHHHHhhhc--hhhhhcCCcceecHHHhhc
Q 013345 199 LVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATD--VMIALMEGLQVLTLEDVLS 276 (445)
Q Consensus 199 i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~dgi~R~Tn--~lia~mdGf~V~~l~eA~~ 276 (445)
-.+..==|.-|+.+|-+-..-..----|+-|++|.+= |.- +..++..-| +.+++- +...+.+.++
T Consensus 155 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iV---------GkP-la~LL~~~~ATVTi~Hs---~T~dl~~~~~ 221 (303)
T 4b4u_A 155 EAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAIL---------GKP-MAMMLLQANATVTICHS---RTQNLPELVK 221 (303)
T ss_dssp CCCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTT---------HHH-HHHHHHHTTCEEEEECT---TCSSHHHHHH
T ss_pred CCcccCccHHHHHHHHHHHCCCCCCCEEEEEeccccc---------cch-HHHHHHhcCCEEEEecC---CCCCHHHHhh
Confidence 2233445888998875421100001123333333221 111 122221111 112221 2345899999
Q ss_pred cCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCC
Q 013345 277 DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 277 ~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
+|||+|+|+|..+-|+.+. +|.||++.++|--
T Consensus 222 ~ADIvV~A~G~p~~i~~d~---vk~GavVIDVGin 253 (303)
T 4b4u_A 222 QADIIVGAVGKAELIQKDW---IKQGAVVVDAGFH 253 (303)
T ss_dssp TCSEEEECSCSTTCBCGGG---SCTTCEEEECCCB
T ss_pred cCCeEEeccCCCCcccccc---ccCCCEEEEecee
Confidence 9999999999999999874 5899999999953
No 47
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=89.62 E-value=2.4 Score=34.75 Aligned_cols=72 Identities=13% Similarity=0.127 Sum_probs=47.2
Q ss_pred hCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEe----------ecCCCCChHHHHHHHHhCCCeEEEecCCCHH
Q 013345 46 FGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWC----------SCNIFSTQDHAAAAIARDSASVFAWKGETLQ 115 (445)
Q Consensus 46 ~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~----------~~np~STqd~vaaaL~~~Gi~V~A~~g~t~e 115 (445)
-...+||+|++|.++-.+..+...|-+.+.++||.|... +.++.........|.. .|++|. +++
T Consensus 10 ~~~~~~l~g~~i~isg~~~~~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~-~gi~IV-----~~~ 83 (107)
T 3l3e_A 10 EEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKE-RGVHIV-----SEH 83 (107)
T ss_dssp ----CTTTTCEEEECGGGGGGHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHH-TTCEEE-----CHH
T ss_pred ccccCCCCCeEEEEeCCChHhHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHH-CCCeEe-----cHH
Confidence 456789999999999888877888888889999998632 2122222233444443 699987 566
Q ss_pred HHHHHHHH
Q 013345 116 EYWWCTEK 123 (445)
Q Consensus 116 ey~~~~~~ 123 (445)
-.++|+.+
T Consensus 84 Wl~~c~~~ 91 (107)
T 3l3e_A 84 WLLDCAQE 91 (107)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666654
No 48
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=89.12 E-value=0.39 Score=49.13 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=40.1
Q ss_pred Ccce-ecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 265 GLQV-LTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 265 Gf~V-~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
|... ..++++++.+|+++.++-. +++|..+.|.+||.|++|.|+|...
T Consensus 234 G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~ 286 (393)
T 2nac_A 234 NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGK 286 (393)
T ss_dssp TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCch
Confidence 4443 4689999999999998753 5788889999999999999999764
No 49
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.50 E-value=0.35 Score=49.82 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=35.6
Q ss_pred ecHHHhhccCCEEEecCC-----CCCCCCHHHHhcCcCCcEEeCCC
Q 013345 269 LTLEDVLSDADIFVTTTG-----NKDIIMVDHMKKMKNNAIVCNIG 309 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTG-----n~~vI~~eh~~~MKdgAILaN~G 309 (445)
..++++++.+||||++.. .+..|+.+.++.||.|+++.|+.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 368999999999999853 33578999999999999999997
No 50
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.42 E-value=0.41 Score=48.92 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=34.9
Q ss_pred cHHHhhccCCEEEecCCCC-----CCCCHHHHhcCcCCcEEeCCC
Q 013345 270 TLEDVLSDADIFVTTTGNK-----DIIMVDHMKKMKNNAIVCNIG 309 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~-----~vI~~eh~~~MKdgAILaN~G 309 (445)
.++++++.+||||++...+ ..|+.+.++.||.|+++.|++
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 5789999999999986332 568999999999999999997
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.34 E-value=0.4 Score=49.10 Aligned_cols=45 Identities=18% Similarity=0.246 Sum_probs=39.0
Q ss_pred ecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 269 LTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
.+++++++.+|+++.++-. +++|..+.|.+||+|++|.|++....
T Consensus 189 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 189 QHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTV 237 (404)
T ss_dssp SCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred CCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence 4789999999999998754 47899999999999999999997653
No 52
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.18 E-value=0.35 Score=49.95 Aligned_cols=53 Identities=21% Similarity=0.377 Sum_probs=42.7
Q ss_pred ceecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 267 QVLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 267 ~V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.+.+++++++.+|+++.+.-. ++.|..+.|.+||+|++|.|++.... +|-++|
T Consensus 198 ~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~v-vd~~aL 254 (416)
T 3k5p_A 198 PAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSD-VDLEAL 254 (416)
T ss_dssp ECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTS-BCHHHH
T ss_pred ecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChh-hhHHHH
Confidence 356799999999999988754 47899999999999999999997654 444444
No 53
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.93 E-value=0.47 Score=47.64 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=35.1
Q ss_pred HHHhhccCCEEEecC---CCC--CCCCHHHHhcCcCCcEEeCCCC
Q 013345 271 LEDVLSDADIFVTTT---GNK--DIIMVDHMKKMKNNAIVCNIGH 310 (445)
Q Consensus 271 l~eA~~~aDifVTaT---Gn~--~vI~~eh~~~MKdgAILaN~Gh 310 (445)
+++.++.+|+||+|+ |.+ ..|+.+.++.||.|+++.|+|-
T Consensus 251 l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 251 VLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 678888999999999 743 4689999999999999999994
No 54
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.84 E-value=0.47 Score=46.76 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=40.3
Q ss_pred CcceecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
|.....++++++.+|++|.++.. +++|..+.+..||.|+++.|++...
T Consensus 198 g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~ 249 (330)
T 2gcg_A 198 QAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGD 249 (330)
T ss_dssp TCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGG
T ss_pred CceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence 44445789999999999999864 5778888899999999999999864
No 55
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.62 E-value=0.46 Score=46.70 Aligned_cols=46 Identities=26% Similarity=0.352 Sum_probs=38.9
Q ss_pred eecHHHhhccCCEEEecCC----CCCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 268 VLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTG----n~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
..+++++++.+|+++.++- ..++|..+.+..||.|+++.|+|....
T Consensus 184 ~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~ 233 (311)
T 2cuk_A 184 FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGAL 233 (311)
T ss_dssp BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence 3467899999999999953 457888899999999999999998653
No 56
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=87.53 E-value=0.45 Score=47.41 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=40.8
Q ss_pred Cccee-cHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 265 GLQVL-TLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 265 Gf~V~-~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
|.... .++++++.+|+||.++-. +++|..+.+..||.|++|.|++....
T Consensus 207 g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~ 260 (348)
T 2w2k_A 207 GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPV 260 (348)
T ss_dssp TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 44444 788999999999999754 47888899999999999999998743
No 57
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.02 E-value=0.49 Score=48.15 Aligned_cols=41 Identities=20% Similarity=0.322 Sum_probs=35.0
Q ss_pred cHHHhhccCCEEEecCCCC-----CCCCHHHHhcCcCCcEEeCCCC
Q 013345 270 TLEDVLSDADIFVTTTGNK-----DIIMVDHMKKMKNNAIVCNIGH 310 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~-----~vI~~eh~~~MKdgAILaN~Gh 310 (445)
.++++++.+|+||++++.+ ..|+.+.++.||.|+++.|+|-
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 3678888999999997443 6689999999999999999994
No 58
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=86.76 E-value=0.37 Score=49.70 Aligned_cols=54 Identities=24% Similarity=0.287 Sum_probs=46.2
Q ss_pred eecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCccccccccccc
Q 013345 268 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLET 322 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~ 322 (445)
..+++||++.+|+||.+.+ ++++|.|.++.|+.+.|+.-..--.-||..+...+
T Consensus 249 ~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~ 302 (398)
T 2a9f_A 249 SGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPDEALE 302 (398)
T ss_dssp CCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHT
T ss_pred hhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHH
Confidence 3469999999999999998 89999999999999999987776667888665543
No 59
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.75 E-value=0.61 Score=46.09 Aligned_cols=48 Identities=29% Similarity=0.384 Sum_probs=39.5
Q ss_pred CcceecHHHhhccCCEEEecCCCC----CCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTGNK----DIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTGn~----~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
|.....++++++.+|++|.++... ++|..+.++.||.|+++.|++-..
T Consensus 192 g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~ 243 (334)
T 2dbq_A 192 NAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGK 243 (334)
T ss_dssp CCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred CcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence 334457899999999999998754 577778899999999999999654
No 60
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.74 E-value=0.53 Score=46.82 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=41.5
Q ss_pred ecHHHhhccCCEEEecCCC----CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTGN----KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn----~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
.+++++++.+|++|.++-. +++|..+.++.||.|++|.|++.... +|...|
T Consensus 207 ~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~-vd~~aL 261 (333)
T 3ba1_A 207 GSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH-VDEPEL 261 (333)
T ss_dssp SCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG-BCHHHH
T ss_pred CCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch-hCHHHH
Confidence 4689999999999999853 57888889999999999999997653 444444
No 61
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=83.09 E-value=1.1 Score=44.40 Aligned_cols=47 Identities=21% Similarity=0.381 Sum_probs=38.5
Q ss_pred CcceecHHHhhccCCEEEecCCCC----CCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 265 GLQVLTLEDVLSDADIFVTTTGNK----DIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTGn~----~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
|.....++++++.+|++|.++... ++|..+.+..||.| ++.|++-..
T Consensus 188 g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~ 238 (333)
T 2d0i_A 188 KARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGA 238 (333)
T ss_dssp TEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGG
T ss_pred CceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCc
Confidence 344457889999999999998764 67887889999999 999999543
No 62
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=82.87 E-value=0.76 Score=45.28 Aligned_cols=49 Identities=29% Similarity=0.356 Sum_probs=38.8
Q ss_pred cHHHhhccCCEEEecCCCCC-CCCHHHHhcCcCCcEEeCCCCCc---ccccccccc
Q 013345 270 TLEDVLSDADIFVTTTGNKD-IIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLE 321 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~-vI~~eh~~~MKdgAILaN~Ghfd---~EId~~~L~ 321 (445)
..+++++.+|||||||.... ++.. +.+|.|+++..+|.+. .|+|..-+.
T Consensus 176 ~~~eav~~aDIVi~aT~s~~pvl~~---~~l~~G~~V~~vGs~~p~~~El~~~~~~ 228 (313)
T 3hdj_A 176 APADIAAQADIVVTATRSTTPLFAG---QALRAGAFVGAIGSSLPHTRELDDEALR 228 (313)
T ss_dssp CHHHHHHHCSEEEECCCCSSCSSCG---GGCCTTCEEEECCCSSTTCCCCCHHHHH
T ss_pred CHHHHHhhCCEEEEccCCCCcccCH---HHcCCCcEEEECCCCCCchhhcCHHHHh
Confidence 78999999999999999874 4443 3589999999999864 578755443
No 63
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=81.52 E-value=3.2 Score=43.22 Aligned_cols=81 Identities=12% Similarity=0.090 Sum_probs=51.3
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
+.|+|+|+++..-- ....-+++.|.++|++|+.+++ ++++.++........|..+.-+.+.+..+....+.+
T Consensus 328 ~~l~GKrv~i~~~~-~~~~~l~~~L~ElGmevv~~gt-~~~~~~d~~~~~~~l~~~~~i~~d~d~~el~~~i~~------ 399 (483)
T 3pdi_A 328 ARLEGKRVLLYTGG-VKSWSVVSALQDLGMKVVATGT-KKSTEEDKARIRELMGDDVKMLDEGNARVLLKTVDE------ 399 (483)
T ss_dssp HHHTTCEEEEECSS-SCHHHHHHHHHHHTCEEEEECB-SSSCHHHHHHHHHHSCSSCCBCCSCSHHHHHHHHHH------
T ss_pred HHhcCCEEEEECCC-chHHHHHHHHHHCCCEEEEEec-CCCCHHHHHHHHHhcCCCCEEEeCCCHHHHHHHHHh------
Confidence 45789999976542 3455677889999999998875 566777665544333433333445555554433322
Q ss_pred CCCCcEEecC
Q 013345 130 GGGPDLIVDD 139 (445)
Q Consensus 130 ~~~p~lilDD 139 (445)
.+|+++|=.
T Consensus 400 -~~pDL~ig~ 408 (483)
T 3pdi_A 400 -YQADILIAG 408 (483)
T ss_dssp -TTCSEEECC
T ss_pred -cCCCEEEEC
Confidence 259999853
No 64
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=80.01 E-value=1.2 Score=44.63 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=34.5
Q ss_pred cHHHhhccCCEEEecCCCCC-----CCCHHHHhcCcCCcEEeCCC
Q 013345 270 TLEDVLSDADIFVTTTGNKD-----IIMVDHMKKMKNNAIVCNIG 309 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~-----vI~~eh~~~MKdgAILaN~G 309 (445)
.++++++.+|++|.|+|... .|+.+.++.||.|+++.|+|
T Consensus 224 ~l~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 224 ELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred HHHHHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 35677889999999998654 46889999999999999998
No 65
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=78.88 E-value=4.7 Score=42.15 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=50.5
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
+.|+|+|+++..-- ....-+++.|.++|++|..+++ ++++.++........+..+..+.+.+..+....+.+.
T Consensus 344 ~~l~GKrv~i~g~~-~~~~~la~~L~ElGm~vv~~gt-~~~~~~d~~~l~~~~~~~~~i~~~~d~~el~~~i~~~----- 416 (492)
T 3u7q_A 344 PRLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGY-EFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRI----- 416 (492)
T ss_dssp HHHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEE-SSCCHHHHHHHHTTSCTTCEEEESCBHHHHHHHHHHH-----
T ss_pred HHhCCCEEEEECCC-chHHHHHHHHHHCCCEEEEEeC-CCCCHHHHHHHHHhCCCCcEEEcCCCHHHHHHHHHhc-----
Confidence 44799999986543 3566678889999999998775 5566666544433223223344455665544433321
Q ss_pred CCCCcEEec
Q 013345 130 GGGPDLIVD 138 (445)
Q Consensus 130 ~~~p~lilD 138 (445)
+|+++|=
T Consensus 417 --~pDL~ig 423 (492)
T 3u7q_A 417 --KPDLIGS 423 (492)
T ss_dssp --CCSEEEE
T ss_pred --CCcEEEe
Confidence 5999875
No 66
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=78.49 E-value=1.7 Score=36.79 Aligned_cols=38 Identities=13% Similarity=0.432 Sum_probs=30.2
Q ss_pred cHHHhhccCCEEEecCCCCCC-CCHHHHhcCcCCcEEeCCCC
Q 013345 270 TLEDVLSDADIFVTTTGNKDI-IMVDHMKKMKNNAIVCNIGH 310 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~v-I~~eh~~~MKdgAILaN~Gh 310 (445)
.++++++.+|++|+|||.... +.. +.++.|.++.++|-
T Consensus 73 ~~~~~~~~~Divi~at~~~~~~~~~---~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 73 DIDSLIKNNDVIITATSSKTPIVEE---RSLMPGKLFIDLGN 111 (144)
T ss_dssp CHHHHHHTCSEEEECSCCSSCSBCG---GGCCTTCEEEECCS
T ss_pred CHHHHhcCCCEEEEeCCCCCcEeeH---HHcCCCCEEEEccC
Confidence 467788899999999998753 333 56788999999985
No 67
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=78.36 E-value=8.5 Score=38.23 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=50.0
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..+++++. +|+|.+|+.+--...=.-=++..|...|++|+++++.-|...+++...+. +.|..+.
T Consensus 143 l~Ti~e~~g---~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~ 212 (315)
T 1pvv_A 143 YMTIWEKKG---TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFE 212 (315)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHhC---CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 467888884 69999999998874444457888889999999999988887776754332 5586654
No 68
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.24 E-value=11 Score=34.93 Aligned_cols=104 Identities=18% Similarity=0.111 Sum_probs=56.4
Q ss_pred ChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-
Q 013345 36 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET- 113 (445)
Q Consensus 36 MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t- 113 (445)
||-.....+.|. ...|+|.++.+.-=-.-==..+++.|.+.|++|.++..+.-...+.+++.+...|..+.... +.+
T Consensus 1 m~~~~~~~~~~~-~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 79 (270)
T 3is3_A 1 MPHVENASETYI-PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ 79 (270)
T ss_dssp ----------CC-TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CCCccccccccC-CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC
Confidence 343333344432 35688988654322111123567889999999999876554455667777776666554443 333
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 114 LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 114 ~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.++....++++.+.- +++++++-+-|-
T Consensus 80 ~~~v~~~~~~~~~~~--g~id~lvnnAg~ 106 (270)
T 3is3_A 80 VPEIVKLFDQAVAHF--GHLDIAVSNSGV 106 (270)
T ss_dssp HHHHHHHHHHHHHHH--SCCCEEECCCCC
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 334444445554331 358888887763
No 69
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=77.77 E-value=12 Score=31.59 Aligned_cols=67 Identities=7% Similarity=-0.018 Sum_probs=45.7
Q ss_pred CCCCCCCcEEEeeeccch-hHHHHHHHHHhCCCEEE----------EeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 48 PSQPFKGAKITGSLHMTI-QTAVLIETLTALGAEVR----------WCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~-kTa~li~tL~a~GAeV~----------~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+.||.|.+|...--+.. .-.-+.+.+.++|+.|. +++.|+.++--.-|. +.||+|. ++++
T Consensus 29 ~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~---~lgI~Ii-----~E~~ 100 (109)
T 2k6g_A 29 AENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAA---ALGTKII-----DEDG 100 (109)
T ss_dssp CTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHH---HHTCEEE-----CHHH
T ss_pred CCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHH---HcCCeEE-----eHHH
Confidence 456899999988877743 45666777889999984 677777523222222 2499997 6777
Q ss_pred HHHHHH
Q 013345 117 YWWCTE 122 (445)
Q Consensus 117 y~~~~~ 122 (445)
|++.|.
T Consensus 101 f~~ll~ 106 (109)
T 2k6g_A 101 LLNLIR 106 (109)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776663
No 70
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.38 E-value=11 Score=31.96 Aligned_cols=68 Identities=7% Similarity=-0.027 Sum_probs=47.7
Q ss_pred CCCCCCCcEEEeeeccch-hHHHHHHHHHhCCCEE----------EEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 48 PSQPFKGAKITGSLHMTI-QTAVLIETLTALGAEV----------RWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~-kTa~li~tL~a~GAeV----------~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+.||.|.+|.+.--+.. ...-+.+.+.++|+.| .+++.|+.++.-.-|. +.||+|. +.++
T Consensus 19 ~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~---~lgI~Ii-----sE~~ 90 (112)
T 2ebu_A 19 AENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAA---ALGTKII-----DEDG 90 (112)
T ss_dssp CSSSSTTCEEEECSCCSSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHH---HHTCEEE-----EHHH
T ss_pred CCCCcCCCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHH---HcCCeEE-----eHHH
Confidence 356899999998877743 5566677888999998 4777777644322233 2499997 5677
Q ss_pred HHHHHHH
Q 013345 117 YWWCTEK 123 (445)
Q Consensus 117 y~~~~~~ 123 (445)
|++.|..
T Consensus 91 f~~ll~~ 97 (112)
T 2ebu_A 91 LLNLIRT 97 (112)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7777653
No 71
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=76.35 E-value=7.2 Score=39.43 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=44.8
Q ss_pred HHHHHHHhCCCCC----------CCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH
Q 013345 39 LMACRAEFGPSQP----------FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA 100 (445)
Q Consensus 39 L~~l~~~~~~~kP----------l~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~ 100 (445)
|..|+++|..-.| |+|++|+.+-.+.-=.-=++..|...|++|+++++.-|.-.+++...+.
T Consensus 163 l~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~ 234 (353)
T 3sds_A 163 FLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQ 234 (353)
T ss_dssp HHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHH
T ss_pred HHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 4567888875433 6999999999886423347788889999999999877766677766543
No 72
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=75.75 E-value=6.9 Score=38.81 Aligned_cols=66 Identities=8% Similarity=0.110 Sum_probs=51.1
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccc--hhHHHHHHHHHhC-CCEEEEeecCCCCChHHHHHHHHhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMT--IQTAVLIETLTAL-GAEVRWCSCNIFSTQDHAAAAIARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt--~kTa~li~tL~a~-GAeV~~~~~np~STqd~vaaaL~~~Gi~V~ 107 (445)
|..+++++. +|+|.+|+.+--+- .=.-=++..|... |++|+++++.-|...+++.+.+.+.|..+.
T Consensus 142 l~Ti~e~~g---~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~ 210 (310)
T 3csu_A 142 LFTIQETQG---RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWS 210 (310)
T ss_dssp HHHHHHHHS---CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhC---CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEE
Confidence 456788874 68999999988763 2234577888899 999999998888887878777777787754
No 73
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=75.70 E-value=10 Score=37.53 Aligned_cols=66 Identities=18% Similarity=0.094 Sum_probs=48.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeecc-chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHM-TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHl-t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..+++++. +|+|++|+.+--. ..=.-=++..|...|++|+++++.-|...+++...+. +.|..+.
T Consensus 136 l~Ti~e~~g---~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~ 206 (307)
T 2i6u_A 136 LQTIAERKG---ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVT 206 (307)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhC---CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 567888884 6899999998876 3333447888889999999999988877776654332 4575553
No 74
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=75.03 E-value=8.7 Score=39.24 Aligned_cols=77 Identities=18% Similarity=0.146 Sum_probs=50.8
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHH-HhCCCEEEEeecCCCCChHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHh
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETL-TALGAEVRWCSCNIFSTQDHAAAAIARD--SASVFAWKGETLQEYWWCTEKALD 126 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL-~a~GAeV~~~~~np~STqd~vaaaL~~~--Gi~V~A~~g~t~eey~~~~~~~l~ 126 (445)
+.|+|+|+++..- .....-+++.| .++|.+|..+++ +++.++.....+... ++.| +.+.+.++..+.+.+.
T Consensus 303 ~~l~Gkrv~i~g~-~~~~~~l~~~L~~elG~~vv~~~~-~~~~~~~~~~~l~~l~~~~~v--~~~~d~~e~~~~i~~~-- 376 (437)
T 3aek_A 303 ETLTGKSLFMFPD-SQLEIPLARFLARECGMKTTEIAT-PFLHKAIMAPDLALLPSNTAL--TEGQDLEAQLDRHEAI-- 376 (437)
T ss_dssp HHHTTCEEEECSS-SSCHHHHHHHHHHTTCCEEEEEEE-SCCCHHHHHHHHTTSBTTCEE--EEECCHHHHHHHHHHH--
T ss_pred HHhCCCEEEEEcC-chHHHHHHHHHHHHcCCEEEEEEe-cCCCHHHHHHHHHhcCCCCEE--EeCCCHHHHHHHHhcc--
Confidence 3478999998764 45666788889 999999999886 445555445555443 5554 3455665544444332
Q ss_pred cCCCCCCcEEe
Q 013345 127 WGPGGGPDLIV 137 (445)
Q Consensus 127 ~~~~~~p~lil 137 (445)
+|+++|
T Consensus 377 -----~pDlii 382 (437)
T 3aek_A 377 -----NPDLTV 382 (437)
T ss_dssp -----CCSEEE
T ss_pred -----CCCEEE
Confidence 599998
No 75
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=74.48 E-value=7 Score=31.91 Aligned_cols=68 Identities=19% Similarity=0.126 Sum_probs=49.2
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEE----------EeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVR----------WCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEY 117 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~----------~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey 117 (445)
...||.|.+|...--+...-.-+.+.+.++|+.|. +++.|+-|--. .| .+.||+|. ++++|
T Consensus 4 ~~~~l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~---kA-~~lgI~Ii-----~E~~f 74 (92)
T 1l7b_A 4 GGEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLE---KA-RALGVPTL-----TEEEL 74 (92)
T ss_dssp CCCSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHH---HH-HCSSSCCE-----EHHHH
T ss_pred CCCCcCCcEEEEecCCCCCHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHH---HH-HHcCCcEE-----eHHHH
Confidence 56899999998877776666777788889999985 56666643322 22 33599997 57778
Q ss_pred HHHHHHH
Q 013345 118 WWCTEKA 124 (445)
Q Consensus 118 ~~~~~~~ 124 (445)
++.+...
T Consensus 75 ~~~l~~~ 81 (92)
T 1l7b_A 75 YRLLEAR 81 (92)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888654
No 76
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=73.49 E-value=8.1 Score=38.27 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=51.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccch-hH-HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTI-QT-AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFA 108 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~-kT-a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A 108 (445)
|..++++|. +|+|.+|+.+--+.- .+ -=++..|...|++|+++++.-|...+++.+.+.+.|..+.-
T Consensus 143 l~Ti~e~~g---~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~ 211 (308)
T 1ml4_A 143 LYTIKKEFG---RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVE 211 (308)
T ss_dssp HHHHHHHSS---CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhC---CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEE
Confidence 456777774 689999999987632 33 34778888999999999988888878887777777877543
No 77
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=73.24 E-value=12 Score=37.12 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=51.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccc-hhHH-HHHHHHHhC-CCEEEEeecCCCCChHHHHHHHHhCCCeEEEe
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMT-IQTA-VLIETLTAL-GAEVRWCSCNIFSTQDHAAAAIARDSASVFAW 109 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt-~kTa-~li~tL~a~-GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~ 109 (445)
|..++++|. +|+|.+|+.+--+. ..++ =++..+... |++|+++++.-|...+++...+.+.|..+.-.
T Consensus 139 l~Ti~e~~g---~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~ 209 (306)
T 4ekn_B 139 LYTIMREIG---RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEK 209 (306)
T ss_dssp HHHHHHHHS---CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhC---CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEE
Confidence 445778875 58999999988663 2333 378888899 99999999877777788887777778877433
No 78
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=72.19 E-value=11 Score=37.54 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=48.2
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeecc-chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHM-TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHl-t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..+++++. +|+|++|+.+--. ..=.-=++..|...|++|+++++.-|...+++.+.+. +.|..+.
T Consensus 155 l~Ti~e~~g---~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~ 225 (325)
T 1vlv_A 155 LMTIEENFG---RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVS 225 (325)
T ss_dssp HHHHHHHHS---CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhC---CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 467888884 6899999998764 2223347788889999999999887877776654332 5586654
No 79
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=71.17 E-value=5 Score=42.99 Aligned_cols=56 Identities=16% Similarity=0.289 Sum_probs=45.4
Q ss_pred eecHHHhhcc--CCEEEecCCCCCCCCHHHHhcCc---CCcEEeCCCCCcc--cccccccccC
Q 013345 268 VLTLEDVLSD--ADIFVTTTGNKDIIMVDHMKKMK---NNAIVCNIGHFDN--EIDMLGLETY 323 (445)
Q Consensus 268 V~~l~eA~~~--aDifVTaTGn~~vI~~eh~~~MK---dgAILaN~Ghfd~--EId~~~L~~~ 323 (445)
..++.||++. +|+||.++|..+++|.|.++.|. +..|+.-..--.- ||..++..++
T Consensus 349 ~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~ 411 (555)
T 1gq2_A 349 MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKY 411 (555)
T ss_dssp CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHH
T ss_pred CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHHh
Confidence 3469999995 99999999988999999999997 6777766655555 8887776654
No 80
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=70.64 E-value=13 Score=37.37 Aligned_cols=65 Identities=15% Similarity=0.131 Sum_probs=49.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..|+++|. .|+|.+|+.+--. ..++ =++..|...|++|+++++.-|...+++...+. +.|..+.
T Consensus 167 l~TI~E~~G---~l~glkva~vGD~-~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~ 236 (340)
T 4ep1_A 167 LMTIYEETN---TFKGIKLAYVGDG-NNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIE 236 (340)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCC-CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHhC---CCCCCEEEEECCC-chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE
Confidence 457888885 4899999999887 3344 38888889999999999888887777665443 4576554
No 81
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.46 E-value=3.4 Score=41.05 Aligned_cols=42 Identities=14% Similarity=0.303 Sum_probs=32.9
Q ss_pred cHHHhhccCCEEEecCCCCC-----CCCHHHHhcCcCCcEEeCCCCC
Q 013345 270 TLEDVLSDADIFVTTTGNKD-----IIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~-----vI~~eh~~~MKdgAILaN~Ghf 311 (445)
.++++++.+|++|.++|... .++.+.++.||.|.++.|+|..
T Consensus 222 ~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 222 NIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp HHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred HHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 35677889999999999653 4688999999999999999953
No 82
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=68.95 E-value=9.6 Score=38.10 Aligned_cols=69 Identities=19% Similarity=0.219 Sum_probs=49.1
Q ss_pred HHHHHHHhC----CCCCCCCcEEEeeeccchhHHH-HHHHHHhCCCEEEEeecCCCC--ChHHHHHHHH----h--CCCe
Q 013345 39 LMACRAEFG----PSQPFKGAKITGSLHMTIQTAV-LIETLTALGAEVRWCSCNIFS--TQDHAAAAIA----R--DSAS 105 (445)
Q Consensus 39 L~~l~~~~~----~~kPl~G~rI~~~lHlt~kTa~-li~tL~a~GAeV~~~~~np~S--Tqd~vaaaL~----~--~Gi~ 105 (445)
|..|+++|. ..++|+|++|+.+-+.--.++. ++..|...|++|+++++.-|. -.+++...+. + .|..
T Consensus 142 l~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (328)
T 3grf_A 142 FMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGS 221 (328)
T ss_dssp HHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCe
Confidence 457888886 2347999999999887334543 788888999999999987776 5555543332 2 5766
Q ss_pred EE
Q 013345 106 VF 107 (445)
Q Consensus 106 V~ 107 (445)
+.
T Consensus 222 v~ 223 (328)
T 3grf_A 222 IK 223 (328)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 83
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=68.60 E-value=0.92 Score=48.25 Aligned_cols=51 Identities=18% Similarity=0.144 Sum_probs=40.6
Q ss_pred hcCCcce-----ecHHHhhccCCEEEecCCCC---CCCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 262 LMEGLQV-----LTLEDVLSDADIFVTTTGNK---DIIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 262 ~mdGf~V-----~~l~eA~~~aDifVTaTGn~---~vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
...|+.+ .+..+|++.||+||.++-.. .++. +.++.||.|++|.-+..|+.
T Consensus 101 ~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~-eI~p~LK~GaILs~AaGf~I 159 (525)
T 3fr7_A 101 RAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYE-KIFSHMKPNSILGLSHGFLL 159 (525)
T ss_dssp HHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHH-HHHHHSCTTCEEEESSSHHH
T ss_pred HHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHH-HHHHhcCCCCeEEEeCCCCH
Confidence 4568775 68999999999999999874 3443 67888999999987777653
No 84
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=68.17 E-value=13 Score=36.74 Aligned_cols=67 Identities=12% Similarity=-0.065 Sum_probs=48.3
Q ss_pred HHHHHHHhCCCCCCC-CcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEEE
Q 013345 39 LMACRAEFGPSQPFK-GAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVFA 108 (445)
Q Consensus 39 L~~l~~~~~~~kPl~-G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~A 108 (445)
|..|++++. +|+ |++|+.+-+...=.-=+++.|...|++|+++++.-|...+++...+. +.|..+.-
T Consensus 133 l~Ti~e~~g---~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~ 204 (307)
T 3tpf_A 133 LFTIKEWNK---MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISL 204 (307)
T ss_dssp HHHHHHTTC---CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhC---CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEE
Confidence 356777774 588 99999999854322347888889999999999887877777654333 44766643
No 85
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=67.94 E-value=7.7 Score=41.95 Aligned_cols=56 Identities=9% Similarity=0.182 Sum_probs=45.6
Q ss_pred ecHHHhhcc--CCEEEecCCCCCCCCHHHHhcCc---CCcEEeCCCCCcc--cccccccccCC
Q 013345 269 LTLEDVLSD--ADIFVTTTGNKDIIMVDHMKKMK---NNAIVCNIGHFDN--EIDMLGLETYP 324 (445)
Q Consensus 269 ~~l~eA~~~--aDifVTaTGn~~vI~~eh~~~MK---dgAILaN~Ghfd~--EId~~~L~~~~ 324 (445)
.++.||++. +|+||.++|..+++|.|.++.|. +..|+.-..--.- ||..++..++.
T Consensus 388 ~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t 450 (605)
T 1o0s_A 388 TSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFT 450 (605)
T ss_dssp CCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHTT
T ss_pred CCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCcCcCHHHHHhhc
Confidence 469999995 99999999988999999999996 6777766655555 88877776653
No 86
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=67.70 E-value=12 Score=37.83 Aligned_cols=66 Identities=15% Similarity=0.214 Sum_probs=47.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeecc-chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHM-TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHl-t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..+++++. +|+|++|+.+--. ..=.-=++..|...|++|+++++.-|...+++.+.+. +.|..|.
T Consensus 164 l~Ti~E~~g---~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~ 234 (359)
T 2w37_A 164 FMTVKENFG---KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLV 234 (359)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhC---CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 567888884 7999999998876 3223347778888999999999887877776654332 4575553
No 87
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=67.67 E-value=6.8 Score=42.08 Aligned_cols=55 Identities=15% Similarity=0.228 Sum_probs=45.1
Q ss_pred ecHHHhhc--cCCEEEecCCCCCCCCHHHHhcCc---CCcEEeCCCCCcc--cccccccccC
Q 013345 269 LTLEDVLS--DADIFVTTTGNKDIIMVDHMKKMK---NNAIVCNIGHFDN--EIDMLGLETY 323 (445)
Q Consensus 269 ~~l~eA~~--~aDifVTaTGn~~vI~~eh~~~MK---dgAILaN~Ghfd~--EId~~~L~~~ 323 (445)
.++.||++ .+|+||.++|..+++|.|.++.|. +..|+.-..--.- ||..++..++
T Consensus 355 ~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~ 416 (564)
T 1pj3_A 355 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTL 416 (564)
T ss_dssp SSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHHHH
T ss_pred CCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHhh
Confidence 46999999 699999999988999999999997 6778766665555 8887766554
No 88
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=67.20 E-value=12 Score=37.51 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=49.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCChHHHHHHH----HhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFSTQDHAAAAI----ARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~STqd~vaaaL----~~~Gi~V~ 107 (445)
|..|+++|...++|+|.+|+.+-.+ -.++ =++..|...|++|+++++.-|...+++...+ .+.|..|.
T Consensus 160 l~Ti~e~~~~G~~l~glkva~vGD~-~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~ 232 (339)
T 4a8t_A 160 LCTMVEHLPEGKKLEDCKVVFVGDA-TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL 232 (339)
T ss_dssp HHHHHHTCCTTCCGGGCEEEEESSC-CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCC-chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE
Confidence 4567777632236999999999998 4454 4888899999999999988887777665443 23476654
No 89
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=66.74 E-value=13 Score=37.37 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=48.4
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeecc-chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHM-TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVFA 108 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHl-t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~A 108 (445)
|..+++++.. +|+|++|+.+--. ..=.-=++..|...|++|+++++.-|...+++...+. +.|..+.-
T Consensus 142 l~Ti~e~~g~--~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~ 214 (335)
T 1dxh_A 142 VLTMREHSDK--PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL 214 (335)
T ss_dssp HHHHHHTCSS--CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCC--CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE
Confidence 4567776632 7999999998876 3333347788889999999999888877776654432 45866543
No 90
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=66.69 E-value=15 Score=36.81 Aligned_cols=67 Identities=9% Similarity=0.142 Sum_probs=48.0
Q ss_pred HHHHHHH-hCCCCCCCCcEEEeeecc-chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAE-FGPSQPFKGAKITGSLHM-TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~-~~~~kPl~G~rI~~~lHl-t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|+.++++ +. ++|+|++|+.+--. ..=.-=++..|...|++|+++++.-|...+++.+.+. +.|..|.
T Consensus 141 l~Ti~e~~~g--~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~ 213 (333)
T 1duv_G 141 LLTMQEHLPG--KAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNIT 213 (333)
T ss_dssp HHHHHHHSTT--CCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcC--CCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE
Confidence 4567887 63 27999999998875 3222346777888999999999888877776654432 5686654
No 91
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=66.41 E-value=12 Score=37.20 Aligned_cols=66 Identities=5% Similarity=0.117 Sum_probs=46.8
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..|++++. +|+|.+|+.+--..-=.-=++..|...|++|+++++.-|...+++...+. +.|..+.
T Consensus 143 l~Ti~e~~g---~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~ 212 (321)
T 1oth_A 143 YLTLQEHYS---SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLL 212 (321)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhC---CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 457788874 69999999998764322346677778999999999888876666655432 3465543
No 92
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=65.26 E-value=14 Score=37.37 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=49.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCChHHHHHHH----HhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFSTQDHAAAAI----ARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~STqd~vaaaL----~~~Gi~V~ 107 (445)
|..|+++|...++|+|.+|+.+-.+ -.++ =++..|...|++|+++++.-|.-.+++...+ .+.|..|.
T Consensus 138 l~TI~E~~~~G~~l~glkva~vGD~-~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~ 210 (355)
T 4a8p_A 138 LCTMVEHLPEGKKLEDCKVVFVGDA-TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL 210 (355)
T ss_dssp HHHHHHTCCTTCCGGGCEEEEESCC-CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCC-chhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE
Confidence 4567777632236999999999998 4454 4888999999999999988787777765543 23476553
No 93
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=63.83 E-value=16 Score=36.04 Aligned_cols=58 Identities=16% Similarity=0.151 Sum_probs=45.0
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHH
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAI 99 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL 99 (445)
|..+++++. +|+|++|+.+--...=.-=++..|...|++|+++++.-|...+++...+
T Consensus 142 l~Ti~e~~g---~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~ 199 (301)
T 2ef0_A 142 LLTLKEVFG---GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRA 199 (301)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHH
T ss_pred HHHHHHHhC---CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhc
Confidence 567888884 6999999999887443345788888999999999988887777665443
No 94
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=63.74 E-value=6.5 Score=38.91 Aligned_cols=41 Identities=10% Similarity=0.331 Sum_probs=34.2
Q ss_pred HHHhhccCCEEEecCCCCC-----CCCHHHHhcCcCCcEEeCCCCC
Q 013345 271 LEDVLSDADIFVTTTGNKD-----IIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 271 l~eA~~~aDifVTaTGn~~-----vI~~eh~~~MKdgAILaN~Ghf 311 (445)
+.+.++.+|++|.|||... .++.+.++.||.|.++.++|-.
T Consensus 224 ~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 224 IETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp HHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred HHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 4567778999999998754 2588889999999999999854
No 95
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=62.60 E-value=34 Score=31.63 Aligned_cols=89 Identities=8% Similarity=-0.119 Sum_probs=48.5
Q ss_pred CCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHh
Q 013345 47 GPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALD 126 (445)
Q Consensus 47 ~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~ 126 (445)
....+|+|.++.+.-=-.-==..+++.|.+.|++|.+++-|+- ..++.+.+.++.++..-=.+.++....++++.+
T Consensus 20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH----ASVTELRQAGAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC----HHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHH
Confidence 3344577777654321111123567889999999999987652 345556556776654433333444444455544
Q ss_pred cCCCCCCcEEecCcc
Q 013345 127 WGPGGGPDLIVDDGG 141 (445)
Q Consensus 127 ~~~~~~p~lilDDGg 141 (445)
.- +++++++-.-|
T Consensus 96 ~~--g~iD~lv~nAg 108 (260)
T 3gem_A 96 QT--SSLRAVVHNAS 108 (260)
T ss_dssp HC--SCCSEEEECCC
T ss_pred hc--CCCCEEEECCC
Confidence 32 36888887776
No 96
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=61.95 E-value=4.8 Score=40.14 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=36.3
Q ss_pred cHHHhhccCCEEEecCCCC---CCCCHHHHhcCcCCcEEeCCCCCc---cccccc
Q 013345 270 TLEDVLSDADIFVTTTGNK---DIIMVDHMKKMKNNAIVCNIGHFD---NEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~---~vI~~eh~~~MKdgAILaN~Ghfd---~EId~~ 318 (445)
..+++++.+|+||+||... .++.. +.+|.|+.+..+|.+. .|++-.
T Consensus 187 ~~~eav~~aDiVi~aTps~~~~pvl~~---~~l~~G~~V~~vgs~~p~~~El~~~ 238 (350)
T 1x7d_A 187 SVAEAVKGVDIITTVTADKAYATIITP---DMLEPGMHLNAVGGDCPGKTELHAD 238 (350)
T ss_dssp SHHHHHTTCSEEEECCCCSSEEEEECG---GGCCTTCEEEECSCCBTTBEEECHH
T ss_pred CHHHHHhcCCEEEEeccCCCCCceecH---HHcCCCCEEEECCCCCCCceeeCHH
Confidence 5889999999999999986 35554 4578999999999764 566643
No 97
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=61.85 E-value=41 Score=30.64 Aligned_cols=91 Identities=16% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKAL 125 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l 125 (445)
...+|+|.++.+.-----==..+++.|.+.|++|.+++-|+ +.-+++++.+...|..+..+. +.+ .++....++++.
T Consensus 8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ-ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 34568888875432222222457788999999999988765 223455566666665554443 333 333334444444
Q ss_pred hcCCCCCCcEEecCcc
Q 013345 126 DWGPGGGPDLIVDDGG 141 (445)
Q Consensus 126 ~~~~~~~p~lilDDGg 141 (445)
+.- +++++++-..|
T Consensus 87 ~~~--g~iD~lv~~Ag 100 (260)
T 2zat_A 87 NLH--GGVDILVSNAA 100 (260)
T ss_dssp HHH--SCCCEEEECCC
T ss_pred HHc--CCCCEEEECCC
Confidence 321 35888887766
No 98
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=61.54 E-value=20 Score=35.79 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=48.9
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..|+++|. .|+|.+|+.+-.. -.++ =++..+...|++|+++++.-|.-.+++...+. +.|..+.
T Consensus 145 l~Ti~e~~g---~l~glkva~vGD~-~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~ 214 (323)
T 3gd5_A 145 LLTIRENFG---RLAGLKLAYVGDG-NNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQ 214 (323)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCC-CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhC---CCCCCEEEEECCC-CcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 457888885 5899999999998 4454 37888889999999999887877777654432 3465553
No 99
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=61.38 E-value=42 Score=31.49 Aligned_cols=92 Identities=9% Similarity=0.033 Sum_probs=53.7
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKAL 125 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l 125 (445)
....|+|.++.+.-=-.-==..+++.|.+.|++|.++..++-...+.+...+.+.|..+.... +.+. ++....++++.
T Consensus 41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 445688988765432222224577889999999999887653334445555556666665444 3333 33333444444
Q ss_pred hcCCCCCCcEEecCcc
Q 013345 126 DWGPGGGPDLIVDDGG 141 (445)
Q Consensus 126 ~~~~~~~p~lilDDGg 141 (445)
+.- +++++++-.-|
T Consensus 121 ~~~--g~iD~lvnnAg 134 (291)
T 3ijr_A 121 RQL--GSLNILVNNVA 134 (291)
T ss_dssp HHH--SSCCEEEECCC
T ss_pred HHc--CCCCEEEECCC
Confidence 321 35788887755
No 100
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=61.35 E-value=47 Score=33.93 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=46.0
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh--HHHHHHHHhCC-CeEEEecCCCHHHHHHHHHHHHhc
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ--DHAAAAIARDS-ASVFAWKGETLQEYWWCTEKALDW 127 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq--d~vaaaL~~~G-i~V~A~~g~t~eey~~~~~~~l~~ 127 (445)
.|+|+|+++..-- ....-+++.|.++|.+|..+++.-.+.. +...+.|...+ .....+-+.+.++.. +.+..
T Consensus 309 ~l~gkrv~i~~~~-~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~----~~i~~ 383 (458)
T 1mio_B 309 YLQGKKVALLGDP-DEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVH----QWIKN 383 (458)
T ss_dssp HHTTCEEEEEECH-HHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHH----HHHHH
T ss_pred HcCCCEEEEEcCc-hHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHH----HHHHh
Confidence 4689999987652 5556677889999999998776543322 11222234334 222223345555543 33322
Q ss_pred CCCCCCcEEe
Q 013345 128 GPGGGPDLIV 137 (445)
Q Consensus 128 ~~~~~p~lil 137 (445)
.+|++++
T Consensus 384 ---~~pDl~i 390 (458)
T 1mio_B 384 ---EGVDLLI 390 (458)
T ss_dssp ---SCCSEEE
T ss_pred ---cCCCEEE
Confidence 2589988
No 101
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=60.28 E-value=23 Score=34.90 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=46.1
Q ss_pred HHHHHHhCCCCCCCCcEEEeeeccc--hhHHHHHHHHHhC-CCEEEEeecCCCCChHHHHHHHHhCCCeEE
Q 013345 40 MACRAEFGPSQPFKGAKITGSLHMT--IQTAVLIETLTAL-GAEVRWCSCNIFSTQDHAAAAIARDSASVF 107 (445)
Q Consensus 40 ~~l~~~~~~~kPl~G~rI~~~lHlt--~kTa~li~tL~a~-GAeV~~~~~np~STqd~vaaaL~~~Gi~V~ 107 (445)
..+++++. +|+|.+|+.+--+- .=.-=++..|... |++|+++++.-|.-.+++ +.+.|..+.
T Consensus 138 ~Ti~e~~g---~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~---~~~~g~~~~ 202 (299)
T 1pg5_A 138 YTINKHFN---TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI---LDELNYPVK 202 (299)
T ss_dssp HHHHHHHS---CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH---HTTCCSCEE
T ss_pred HHHHHHhC---CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH---HHHcCCeEE
Confidence 45788874 68999999988762 3334577888899 999999998777776666 345676653
No 102
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=59.29 E-value=8.2 Score=37.38 Aligned_cols=42 Identities=19% Similarity=0.314 Sum_probs=32.7
Q ss_pred ecHHHhhccCCEEEecCCCCC-CCCHHHHhcCcCCcEEeCCCCCcc
Q 013345 269 LTLEDVLSDADIFVTTTGNKD-IIMVDHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~-vI~~eh~~~MKdgAILaN~Ghfd~ 313 (445)
.+++++++.+|+||+||-... ++.. +.++.|+++.++|.+.-
T Consensus 188 ~~~~e~v~~aDiVi~atp~~~~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 188 SSVQEAVAGADVIITVTLATEPILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp SSHHHHHTTCSEEEECCCCSSCCBCG---GGSCTTCEEEECCCCST
T ss_pred CCHHHHHhcCCEEEEEeCCCCcccCH---HHcCCCcEEEeCCCCCC
Confidence 368899999999999998653 3333 57899999999986543
No 103
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=59.19 E-value=9.6 Score=38.34 Aligned_cols=62 Identities=21% Similarity=0.420 Sum_probs=43.1
Q ss_pred cHHHhhccCCEEEecCCCCC-CCCHHHHhc--Cc----CCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecC
Q 013345 270 TLEDVLSDADIFVTTTGNKD-IIMVDHMKK--MK----NNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE 342 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~-vI~~eh~~~--MK----dgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpd 342 (445)
.+.+++..+|++|+|||... +++.+.++. || .+.++.|++- ..+++ +.+.+ .++|.-|.+|+
T Consensus 220 ~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~-~~l~~---------l~~v~l~d~d~ 288 (404)
T 1gpj_A 220 ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVE-EGVEN---------IEDVEVRTIDD 288 (404)
T ss_dssp GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBC-TTGGG---------STTEEEEEHHH
T ss_pred hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCC-ccccc---------cCCeEEEeHhh
Confidence 46777889999999999875 457788887 44 6788888874 44444 22322 25677777775
No 104
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=57.84 E-value=1.6e+02 Score=29.69 Aligned_cols=95 Identities=17% Similarity=0.096 Sum_probs=51.2
Q ss_pred CCchhhhhhhHHHHHhhChhHHHHHHHhC--CCCCCCCcEEEeeeccchhHH---HHHHHHHhCCCEEEEeecCC-----
Q 013345 19 LSQADFGRLEIELAEVEMPGLMACRAEFG--PSQPFKGAKITGSLHMTIQTA---VLIETLTALGAEVRWCSCNI----- 88 (445)
Q Consensus 19 ~~la~~G~~~i~wa~~~MP~L~~l~~~~~--~~kPl~G~rI~~~lHlt~kTa---~li~tL~a~GAeV~~~~~np----- 88 (445)
+++.++.+.+|..--+.---|.+..++.. ..++|+|+.|+. +=-++-|- -+--.-..+|+.|...+.+-
T Consensus 34 Lsl~Dls~~ei~~ll~~A~~lK~~~~~~~~~~~~~L~GK~va~-lF~e~STRTR~SFE~A~~~LGg~vi~l~~~~ss~~k 112 (365)
T 4amu_A 34 DSLLNFTTEEVQHLIDLSIDLKKAKYQGLHINNRPLVGKNIAI-LFQKDSTRTRCAFEVAASDLGAGVTYIGPSGSNMGK 112 (365)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHHHHHTTTTTTCCTTTTCEEEE-EESSCCHHHHHHHHHHHHHHTCEEEEECHHHHCCSS
T ss_pred CchhhCCHHHHHHHHHHHHHHHhhhhcCCcccccccCCceEEE-EecCCCchHHHHHHHHHHhCCCEEEEcCCccccCCC
Confidence 45555565555432222112233333222 356899988875 43444443 33344567899987653221
Q ss_pred CCChHHHHHHHHhCCCeEEEecCCCHH
Q 013345 89 FSTQDHAAAAIARDSASVFAWKGETLQ 115 (445)
Q Consensus 89 ~STqd~vaaaL~~~Gi~V~A~~g~t~e 115 (445)
--|-.|+|.-|... +.++.+|+-..+
T Consensus 113 gEsl~DTarvLs~~-~D~IviR~~~~~ 138 (365)
T 4amu_A 113 KESIEDTAKVLGRF-YDGIEFRGFAQS 138 (365)
T ss_dssp SSCHHHHHHHHHHH-CSEEEEECSCHH
T ss_pred CcCHHHHHHHHHhh-CcEEEEecCChh
Confidence 22557788877766 456666665543
No 105
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=57.46 E-value=37 Score=31.38 Aligned_cols=68 Identities=15% Similarity=0.150 Sum_probs=44.1
Q ss_pred HHHHHHHHhC--CCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 68 AVLIETLTAL--GAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 68 a~li~tL~a~--GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
..+++.|.+. +++|...-||+-.. .+.....+.|||++.+.- .+.++|...+.+.|.. .+|++|+=-|
T Consensus 18 ~~~l~~l~~~~l~~~I~~Vit~~~~~--~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~---~~~Dliv~a~ 90 (212)
T 3av3_A 18 QAIVDAAKRGDLPARVALLVCDRPGA--KVIERAARENVPAFVFSPKDYPSKAAFESEILRELKG---RQIDWIALAG 90 (212)
T ss_dssp HHHHHHHHTTCCCEEEEEEEESSTTC--HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH---TTCCEEEESS
T ss_pred HHHHHHHHhCCCCCeEEEEEeCCCCc--HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHh---cCCCEEEEch
Confidence 3556777777 78998777775222 355455677999986432 3567777666666643 2588887655
No 106
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.53 E-value=35 Score=32.34 Aligned_cols=88 Identities=15% Similarity=0.026 Sum_probs=55.2
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t-~eey~~~~~~~l~~~ 128 (445)
.|+|+.+.+.-=---==...++.|.+.||.|.++.-|+ ..-+++++.|.+.|..+++.+. .+ .++-...++++.+.-
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~-~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRA-TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH-HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46776654321100111346788999999999987654 2335677778888888877663 33 334445556665532
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
++.|+++-+-|
T Consensus 85 --G~iDiLVNNAG 95 (255)
T 4g81_D 85 --IHVDILINNAG 95 (255)
T ss_dssp --CCCCEEEECCC
T ss_pred --CCCcEEEECCC
Confidence 46899998877
No 107
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.06 E-value=27 Score=29.53 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=44.4
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEE----------eecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHH
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRW----------CSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYW 118 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~----------~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~ 118 (445)
.++|+|++|.++-.+..+...|.+.+.++||.|.- |+. + .+ .....|.. .||+|. +.+.++
T Consensus 20 ~~~f~g~~i~itG~~~~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~-~-~~-~K~~~A~~-~gi~IV-----~~~Wl~ 90 (129)
T 2d8m_A 20 GKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAF-A-NT-PKYSQVLG-LGGRIV-----RKEWVL 90 (129)
T ss_dssp TTTSTTEEEEEESCCTTHHHHHHHHHHHTTEEEESSCCTTCCEEEESS-S-SC-HHHHHHHH-HTCEEE-----ETHHHH
T ss_pred cccCCCeEEEEeCCCcHHHHHHHHHHHHcCCEEeCCcCCCCeEEEecC-C-CC-hHHHHHHH-CCCcEe-----cHHHHH
Confidence 46899999999888877788899999999999852 221 1 12 22333333 599987 355566
Q ss_pred HHHH
Q 013345 119 WCTE 122 (445)
Q Consensus 119 ~~~~ 122 (445)
+|+.
T Consensus 91 d~~~ 94 (129)
T 2d8m_A 91 DCHR 94 (129)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6663
No 108
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=54.74 E-value=21 Score=36.19 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=46.7
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCC--hHHHHHH----HHhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFST--QDHAAAA----IARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~ST--qd~vaaa----L~~~Gi~V~ 107 (445)
|..++++|.. |+|.+|+.+-..--.++ =++..|..+|++|+++++.-|.. .+++.+. +.+.|..+.
T Consensus 168 l~Ti~E~~G~---l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~ 240 (365)
T 4amu_A 168 FMTMKEKFGN---LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR 240 (365)
T ss_dssp HHHHHHHHSS---CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHhCC---CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE
Confidence 4567888863 89999999988732344 37888889999999998766665 4555433 234576654
No 109
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=54.03 E-value=85 Score=32.79 Aligned_cols=80 Identities=14% Similarity=0.049 Sum_probs=47.7
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChH--HHHHHHHhC----CCeEEEecCCCHHHHHHHHHH
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD--HAAAAIARD----SASVFAWKGETLQEYWWCTEK 123 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd--~vaaaL~~~----Gi~V~A~~g~t~eey~~~~~~ 123 (445)
+.|+|+|+++..- .....-|++.|.++|++|..+++.-.+..+ ...+.|... +..| +-+.+..+....+.+
T Consensus 356 ~~l~Gkrv~i~gd-~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v--~~~~d~~~l~~~i~~ 432 (519)
T 1qgu_B 356 TWLHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEV--FINCDLWHFRSLMFT 432 (519)
T ss_dssp HHHTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEE--EESCCHHHHHHHHHH
T ss_pred HHcCCCEEEEECC-chHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEE--EECCCHHHHHHHHhh
Confidence 4568999998863 234445678899999999877765443221 122223332 4455 445566665444433
Q ss_pred HHhcCCCCCCcEEecC
Q 013345 124 ALDWGPGGGPDLIVDD 139 (445)
Q Consensus 124 ~l~~~~~~~p~lilDD 139 (445)
. +|+++|=+
T Consensus 433 ~-------~pDLiig~ 441 (519)
T 1qgu_B 433 R-------QPDFMIGN 441 (519)
T ss_dssp H-------CCSEEEEC
T ss_pred c-------CCCEEEEC
Confidence 2 58998844
No 110
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=53.27 E-value=23 Score=34.79 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=42.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccc--hhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMT--IQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASV 106 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt--~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V 106 (445)
|..+++++. +|+|.+|+.+--+- .=--=++..|...|++|+++++.-|-..+ +.+.|+++
T Consensus 134 l~Ti~e~~g---~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~-----~~~~g~~~ 195 (291)
T 3d6n_B 134 FFTIKEHFG---EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD-----VEVFKVDV 195 (291)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-----GGGGCEEE
T ss_pred HHHHHHHhC---CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch-----HHHCCCEE
Confidence 456788874 68999999988643 22234778888999999999887664433 22457655
No 111
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=53.26 E-value=39 Score=34.60 Aligned_cols=69 Identities=19% Similarity=0.183 Sum_probs=46.8
Q ss_pred HHHHHHHhCCCCCCCCcEEEee---eccchh---H-HHHHHHHHhCCCEEEEeecCCCCChHHHHHHH----HhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGS---LHMTIQ---T-AVLIETLTALGAEVRWCSCNIFSTQDHAAAAI----ARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~---lHlt~k---T-a~li~tL~a~GAeV~~~~~np~STqd~vaaaL----~~~Gi~V~ 107 (445)
|..|++.|..-..|+|.+|+.+ .|---. . -=++..+...|++|+++++.-|.-.+++...+ .+.|..+.
T Consensus 176 l~TI~E~~G~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~ 255 (399)
T 3q98_A 176 LAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR 255 (399)
T ss_dssp HHHHHHHHSSSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHhCCccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE
Confidence 5688999976666899999976 232111 1 34677788899999999877666555554432 24477664
No 112
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=52.42 E-value=17 Score=37.75 Aligned_cols=53 Identities=25% Similarity=0.262 Sum_probs=41.4
Q ss_pred ecHHHhhccCCEEEecCCCC-CCCCHHHHhcCcCCcEEeCCCCCcccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTGNK-DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLE 321 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~-~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~ 321 (445)
..+.++++.+|+||.+|+-. ++++.+.++.|+.+.|+..+-.-..|+-+.+..
T Consensus 255 ~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~ 308 (439)
T 2dvm_A 255 GGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAK 308 (439)
T ss_dssp SSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHH
T ss_pred ccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHH
Confidence 36789999999999999985 888988899999999998883333356555443
No 113
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=52.21 E-value=62 Score=27.83 Aligned_cols=79 Identities=11% Similarity=-0.036 Sum_probs=48.5
Q ss_pred EEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh--HHHHHHHHhCCCeEEEecC----CCHHHHHHHHHHHHhcCCC
Q 013345 57 ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ--DHAAAAIARDSASVFAWKG----ETLQEYWWCTEKALDWGPG 130 (445)
Q Consensus 57 I~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq--d~vaaaL~~~Gi~V~A~~g----~t~eey~~~~~~~l~~~~~ 130 (445)
+..+-.++.. .++.|.+.||+|.++..+.-... .++++.+.+.|+.++.... .+.++....++.+.+..
T Consensus 22 l~~s~~p~~a---~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-- 96 (157)
T 3gxh_A 22 LLSSGLPNEQ---QFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-- 96 (157)
T ss_dssp EEEEBCCCHH---HHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT--
T ss_pred eeEcCCCCHH---HHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC--
Confidence 4445555543 44778999999999876654332 2456667777887766542 23356555555555421
Q ss_pred CCCcEEecCcc
Q 013345 131 GGPDLIVDDGG 141 (445)
Q Consensus 131 ~~p~lilDDGg 141 (445)
++ ++++-+-|
T Consensus 97 G~-dVLVnnAg 106 (157)
T 3gxh_A 97 GK-DVLVHCLA 106 (157)
T ss_dssp TS-CEEEECSB
T ss_pred CC-CEEEECCC
Confidence 24 88887755
No 114
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=52.18 E-value=29 Score=32.43 Aligned_cols=58 Identities=24% Similarity=0.179 Sum_probs=39.5
Q ss_pred CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec---CCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 77 LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK---GETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 77 ~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~---g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
.+++|....|||- ..+.....+.|||++... ..+.++|...+.+.|.. .+|++|+=-|
T Consensus 37 ~~~eI~~Vis~~~---a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~---~~~Dlivlag 97 (215)
T 3da8_A 37 YPARVVAVGVDRE---CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAA---HEPDLVVSAG 97 (215)
T ss_dssp CSEEEEEEEESSC---CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHT---TCCSEEEEEE
T ss_pred CCCeEEEEEeCCc---hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh---hCCCEEEEcC
Confidence 4679998888883 233334456799999873 35678887777676653 2588877554
No 115
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=51.32 E-value=80 Score=28.80 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=49.5
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.---.-==..+++.|.+.|++|.+++-|+ ...+++++.+.+.|..+..+. +.+ .++....++++.+.-
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR-EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46676654332111222357788999999999988665 223445556655565554443 333 333334444444321
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 83 --g~id~lv~nAg 93 (262)
T 1zem_A 83 --GKIDFLFNNAG 93 (262)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 25788888776
No 116
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=51.04 E-value=24 Score=29.20 Aligned_cols=44 Identities=14% Similarity=-0.000 Sum_probs=35.5
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+++.|.+.|+++.+|+. --+.+...|.+.||.|+.....+.++
T Consensus 54 ~~~~~L~~~gv~~vi~~~----iG~~a~~~L~~~GI~v~~~~~~~v~e 97 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYG----IGRRAIEYFNSLGISVVTGVYGRISD 97 (121)
T ss_dssp HHHHHHHHTTCCEEECSB----CCHHHHHHHHHTTCEEECSBCSBHHH
T ss_pred HHHHHHHHcCCCEEEECC----CCHhHHHHHHHCCCEEEECCCCCHHH
Confidence 677888999999999973 35678899999999999765556555
No 117
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=50.93 E-value=71 Score=29.18 Aligned_cols=92 Identities=18% Similarity=0.098 Sum_probs=53.0
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKAL 125 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l 125 (445)
....|+|.++.+.-=-.-==..+++.|.+.||+|.+++.|+ ...+++++.+.+.|..+.... +.+. ++....++++.
T Consensus 6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS-EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34567888765432111112356788899999999988654 233456666666666555443 3333 33333444444
Q ss_pred hcCCCCCCcEEecCcch
Q 013345 126 DWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 126 ~~~~~~~p~lilDDGgd 142 (445)
+.- +++++++-.-|-
T Consensus 85 ~~~--g~id~lv~nAg~ 99 (256)
T 3gaf_A 85 DQF--GKITVLVNNAGG 99 (256)
T ss_dssp HHH--SCCCEEEECCCC
T ss_pred HHc--CCCCEEEECCCC
Confidence 321 358888887773
No 118
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=50.74 E-value=29 Score=28.84 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=35.6
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+++.|...|+++.+|+. --+.+.+.|.+.||.|+.....+.++
T Consensus 56 ~~~~~l~~~gv~~vi~~~----iG~~a~~~L~~~GI~v~~~~~~~i~e 99 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIASS----PGPNAFEVLNELGIKIYRATGTSVEE 99 (124)
T ss_dssp THHHHHHHTTCCEEEECC----SSHHHHHHHHHHTCEEEECCSCCHHH
T ss_pred HHHHHHHHCCCCEEEECC----cCHHHHHHHHHCCCEEEEcCCCCHHH
Confidence 467888999999999984 35678899999999999866666655
No 119
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=50.60 E-value=23 Score=30.49 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=35.2
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+++.|.+.|+++.+|+. --+.+.+.|.+.||.|+.....+.++
T Consensus 67 ~~a~~L~~~gv~vVI~g~----IG~~a~~~L~~~GI~v~~~~~g~i~e 110 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRG----IGRRAIAAFEAMGVKVIKGASGTVEE 110 (136)
T ss_dssp CHHHHHHHTTCSEEECSC----CCHHHHHHHHHTTCEEECSCCSBHHH
T ss_pred HHHHHHHHCCCCEEEECC----CCHHHHHHHHHCCCEEEecCCCCHHH
Confidence 567888999999999873 35678999999999999765556555
No 120
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=49.73 E-value=18 Score=38.15 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=41.0
Q ss_pred eecHHHhhccCCEEEecCCC-CCCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 268 VLTLEDVLSDADIFVTTTGN-KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 268 V~~l~eA~~~aDifVTaTGn-~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
..++.||++.+|+||.+++- .+++|.|.++.|.+..|+.-..--.-||..+..
T Consensus 285 ~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A 338 (487)
T 3nv9_A 285 FGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEA 338 (487)
T ss_dssp CCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHH
T ss_pred CCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHH
Confidence 45799999999999999943 789999999999988886533322338876654
No 121
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=49.21 E-value=1e+02 Score=28.57 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=48.9
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.-=---==..+++.|.+.|++|++++-|+ ...+++++.+...| .+..+. +.+. ++....++++.+.-
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA-EACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH-HHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 47887765432222222457788999999999987654 22234455555445 444333 3333 33333444444322
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 104 --g~iD~lvnnAg 114 (276)
T 2b4q_A 104 --ARLDILVNNAG 114 (276)
T ss_dssp --SCCSEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 35898888877
No 122
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=48.95 E-value=62 Score=30.35 Aligned_cols=81 Identities=10% Similarity=0.015 Sum_probs=48.1
Q ss_pred cEEEeeeccch-hHHHHHHHHHhC--CCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcC
Q 013345 55 AKITGSLHMTI-QTAVLIETLTAL--GAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWG 128 (445)
Q Consensus 55 ~rI~~~lHlt~-kTa~li~tL~a~--GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~ 128 (445)
.||+...==+. --..+++.|.+. +++|...-||+-.. .+.....+.|||++.+.- .+.++|...+.+.|..
T Consensus 23 ~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~- 99 (229)
T 3auf_A 23 IRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADA--YGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQA- 99 (229)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC--HHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHH-
T ss_pred cEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch--HHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHh-
Confidence 47776532222 234566777766 78987776774222 233344567999986432 3566776666666643
Q ss_pred CCCCCcEEecCc
Q 013345 129 PGGGPDLIVDDG 140 (445)
Q Consensus 129 ~~~~p~lilDDG 140 (445)
.+|++|+=-|
T Consensus 100 --~~~Dliv~ag 109 (229)
T 3auf_A 100 --YGVDLVCLAG 109 (229)
T ss_dssp --TTCSEEEESS
T ss_pred --cCCCEEEEcC
Confidence 2588876554
No 123
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=48.94 E-value=60 Score=32.89 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=46.6
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCC---hHHHHHHHHh----C---CCeEEEecCCCHHHHHHH
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST---QDHAAAAIAR----D---SASVFAWKGETLQEYWWC 120 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~ST---qd~vaaaL~~----~---Gi~V~A~~g~t~eey~~~ 120 (445)
.|+|+|+++..- .....-+++.|.++|++|..+++ |+.. +......|.+ . +..|+ .+.+..+....
T Consensus 314 ~l~GKrv~i~g~-~~~~~~la~~L~elGm~vv~~gt-~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~--~~~d~~el~~~ 389 (460)
T 2xdq_A 314 LVRGKSVFFMGD-NLLEISLARFLIRCGMRVLEIGI-PYMDKRYQAAELALLSQTCAEMGHPLPTIV--EKPDNYNQLQR 389 (460)
T ss_dssp HHTTCEEEECCC-SSCHHHHHHHHHHTTCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHTTCCCCEEE--ESCCHHHHHHH
T ss_pred HhcCCEEEEECC-chHHHHHHHHHHHCCCEEEEeCC-CCCChhHHHHHHHHHHHHHHhhCCCCcEEE--ECCCHHHHHHH
Confidence 378999998742 34555678889999999999874 4432 2222333432 2 33443 45566665444
Q ss_pred HHHHHhcCCCCCCcEEe
Q 013345 121 TEKALDWGPGGGPDLIV 137 (445)
Q Consensus 121 ~~~~l~~~~~~~p~lil 137 (445)
+.+. +|+++|
T Consensus 390 i~~~-------~pDL~i 399 (460)
T 2xdq_A 390 IKAL-------QPDLVI 399 (460)
T ss_dssp HHHH-------CCSEEE
T ss_pred Hhcc-------CCCEEE
Confidence 4332 599999
No 124
>2pb9_A Phosphomethylpyrimidine kinase; phosphate, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.70A {Pyrococcus furiosus} SCOP: c.74.1.2
Probab=48.68 E-value=20 Score=33.36 Aligned_cols=81 Identities=21% Similarity=0.111 Sum_probs=56.0
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHH----HHHHHHhCCCeEEEe-cCCCHHHHHHH--------
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH----AAAAIARDSASVFAW-KGETLQEYWWC-------- 120 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~----vaaaL~~~Gi~V~A~-~g~t~eey~~~-------- 120 (445)
+.+.|.+-| +|-++.+....+.+++.+- |+ -..++ +..+|.+.|..|.-+ +...+++....
T Consensus 69 ~p~FGaS~H----~Ar~lL~a~~~~P~iRsai-NI-ry~~~~~~~i~~~l~~~g~~v~~~dr~~ePeev~~~eg~tm~Wg 142 (195)
T 2pb9_A 69 PVEFGASDH----LARAVLTYMRFYPEYRSAI-NI-RYSREIIEEIIEIAQERGFKVSFYDRREEPEEIKAKEGATIPWG 142 (195)
T ss_dssp CEEETCCSH----HHHHHHHHHTTCTTCCEEE-EE-CCCHHHHHHHHHHHHHTTCEEEECCGGGSCHHHHHSTTCHHHHH
T ss_pred CCcCCCcHH----HHHHHHHHHHhCCCceEEE-EE-eechhhhHHHHHHHHHcCCeEEEECCccCchhhhhcccccchHH
Confidence 344455554 5888999999999999765 44 34455 899999999998544 22334544433
Q ss_pred HHHHHhcCCCCCCcEEecCcc
Q 013345 121 TEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 121 ~~~~l~~~~~~~p~lilDDGg 141 (445)
+++++..- ++-|++|.|-|+
T Consensus 143 i~~a~~~~-~~~PdvIyd~G~ 162 (195)
T 2pb9_A 143 IETAIKRI-KERPDIIYHLGD 162 (195)
T ss_dssp HHHHHHHS-SSCEEEEEECCB
T ss_pred HHHHHHhc-CCCCeEEEeCCC
Confidence 77887632 246999999998
No 125
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=48.36 E-value=51 Score=33.36 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=46.7
Q ss_pred HHHHHHHhCCCCCCCCcE--EEeeeccch---hH-HHHHHHHHhCCCEEEEeecC-CCCChHHHHHHHH----hCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAK--ITGSLHMTI---QT-AVLIETLTALGAEVRWCSCN-IFSTQDHAAAAIA----RDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~r--I~~~lHlt~---kT-a~li~tL~a~GAeV~~~~~n-p~STqd~vaaaL~----~~Gi~V~ 107 (445)
|..|+++|... .|+|.+ |+.+-++.. .+ -=+++.|...|++|+++++. -|.-.+++...+. +.|..+.
T Consensus 176 l~TI~E~~g~~-~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~ 254 (359)
T 1zq6_A 176 ALALQEHFGTP-DLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQ 254 (359)
T ss_dssp HHHHHHHHTSS-CCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHHHhCCC-cccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEE
Confidence 45788888642 389999 888777532 23 35778888999999999886 5666666654332 4466654
No 126
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=47.56 E-value=46 Score=32.61 Aligned_cols=77 Identities=16% Similarity=-0.006 Sum_probs=48.8
Q ss_pred cEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCC--------hHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHH
Q 013345 55 AKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFST--------QDHAAAAIARDSASVFAWKGETLQEYWWCTEKAL 125 (445)
Q Consensus 55 ~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~ST--------qd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l 125 (445)
.||..+- +++-| ..++.|.+.|.+|...-|||-.. ...+.....+.||||+.......++....+.
T Consensus 4 mrIvf~G--t~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~--- 78 (314)
T 1fmt_A 4 LRIIFAG--TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVA--- 78 (314)
T ss_dssp CEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHH---
T ss_pred CEEEEEe--cCHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHHHHH---
Confidence 5777666 45533 33477888899998888887432 2456666677899998765554445443332
Q ss_pred hcCCCCCCcEEecCc
Q 013345 126 DWGPGGGPDLIVDDG 140 (445)
Q Consensus 126 ~~~~~~~p~lilDDG 140 (445)
++ +|++|+=-|
T Consensus 79 ~~----~~Dliv~~~ 89 (314)
T 1fmt_A 79 EL----QADVMVVVA 89 (314)
T ss_dssp HT----TCSEEEEES
T ss_pred hc----CCCEEEEee
Confidence 22 488877655
No 127
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=47.54 E-value=1.1e+02 Score=28.19 Aligned_cols=91 Identities=12% Similarity=-0.067 Sum_probs=50.7
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHh
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALD 126 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~ 126 (445)
...++|.+|.+.-=-.-==..+++.|.+.|++|+++.-|+ +..+++++.+...|..+..+. +.+ .++....++++.+
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ-KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH-HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 3567788765432222223457788899999999876554 222345555655565554443 333 3333334444443
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.. +++++++-..|-
T Consensus 118 ~~--~~id~li~~Ag~ 131 (285)
T 2c07_A 118 EH--KNVDILVNNAGI 131 (285)
T ss_dssp HC--SCCCEEEECCCC
T ss_pred hc--CCCCEEEECCCC
Confidence 21 357888887763
No 128
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=47.47 E-value=48 Score=32.70 Aligned_cols=55 Identities=18% Similarity=0.041 Sum_probs=38.2
Q ss_pred cEEEeeeccchhHHH-HHHHHHhCCCEEEEeecCCC--CChHHHHHHHHhCCCeEEEecC
Q 013345 55 AKITGSLHMTIQTAV-LIETLTALGAEVRWCSCNIF--STQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 55 ~rI~~~lHlt~kTa~-li~tL~a~GAeV~~~~~np~--STqd~vaaaL~~~Gi~V~A~~g 111 (445)
.||...- +++-++ +++.|.+.|.+|...-|.|- +-.+.+.....+.||||+....
T Consensus 23 mrIvf~G--~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~ 80 (329)
T 2bw0_A 23 MKIAVIG--QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSR 80 (329)
T ss_dssp CEEEEEC--CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSC
T ss_pred CEEEEEc--CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCc
Confidence 6888874 777774 77999999999976665442 2234455444567999998653
No 129
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=47.33 E-value=1.3e+02 Score=27.26 Aligned_cols=90 Identities=18% Similarity=0.095 Sum_probs=50.9
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.-=---==..+++.|.+.|++|++++-|+ +..+++++.+...|..+.... +.+. ++....++++.+.-
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ-KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47777765432211222356788999999999988665 223445556655565554443 3333 33334444444321
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
++++++++-..|-
T Consensus 85 -~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 -HGKLNILVNNAGI 97 (260)
T ss_dssp -TTCCCEEEECCCC
T ss_pred -CCCCCEEEECCCC
Confidence 1258888888773
No 130
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=47.01 E-value=1.9e+02 Score=28.43 Aligned_cols=95 Identities=14% Similarity=-0.033 Sum_probs=56.2
Q ss_pred hHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCE---EEEeecCCCCChHHHHHHHHhCCCeEEEecCCCH
Q 013345 38 GLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE---VRWCSCNIFSTQDHAAAAIARDSASVFAWKGETL 114 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAe---V~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ 114 (445)
++..+++.+ +.|+ .|+.|-+-+.+..++-+.|.+ ||. +. -+-+-. ..+.++...+++|.+|...+-.+.
T Consensus 113 vV~~v~~~~--~vpl---sI~DT~~~~~~~~V~eaal~a-ga~~k~iI-Ndvs~~-~~~~~~~~aa~~g~~vv~m~~~dv 184 (310)
T 2h9a_B 113 VCKAVADAI--DVPL---MIIGCGVEEKDAEIFPVIGEA-LSGRNCLL-SSATKD-NYKPIVATCMVHGHSVVASAPLDI 184 (310)
T ss_dssp HHHHHHHHC--SSCE---EEECCSCHHHHHHHHHHHHHH-TTTSCCEE-EEECTT-THHHHHHHHHHHTCEEEEECSSCH
T ss_pred HHHHHHHhC--CceE---EEECCCCCCCCHHHHHHHHHh-CCCCCCEE-EECCCC-ccHHHHHHHHHhCCCEEEEChhHH
Confidence 777777764 3332 121232444888888888777 453 32 111222 345666666788999999886566
Q ss_pred HHHHHHHHHHHhcCCCCCC-cEEecCcch
Q 013345 115 QEYWWCTEKALDWGPGGGP-DLIVDDGGD 142 (445)
Q Consensus 115 eey~~~~~~~l~~~~~~~p-~lilDDGgd 142 (445)
+...+.++.+.+. +-.+ +||+|-|-.
T Consensus 185 ~~l~~~~~~a~~~--Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 185 NLSKQLNIMIMEM--NLAPNRIIMDPLIG 211 (310)
T ss_dssp HHHHHHHHHHHTT--TCCGGGEEEECCCC
T ss_pred HHHHHHHHHHHHC--CCChhhEEEeCCCc
Confidence 5555555555543 2222 699998864
No 131
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=46.44 E-value=7.3 Score=41.10 Aligned_cols=50 Identities=26% Similarity=0.387 Sum_probs=40.3
Q ss_pred hcCCcceecHHHhhccCCEEEecCCCC---CCCCHHHHhcCcCCcEEeCCCCCc
Q 013345 262 LMEGLQVLTLEDVLSDADIFVTTTGNK---DIIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 262 ~mdGf~V~~l~eA~~~aDifVTaTGn~---~vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
.-|||.|.+.+||++.||||+--|=.. +|. .+-.+.||.|+.|+=+=.|+
T Consensus 83 ~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~~vy-~~I~p~lk~G~~L~faHGFn 135 (491)
T 3ulk_A 83 TENGFKVGTYEELIPQADLVINLTPDKQHSDVV-RTVQPLMKDGAALGYSHGFN 135 (491)
T ss_dssp HHTTCEEEEHHHHGGGCSEEEECSCGGGHHHHH-HHHGGGSCTTCEEEESSCHH
T ss_pred HHCCCEecCHHHHHHhCCEEEEeCChhhHHHHH-HHHHhhCCCCCEEEecCccc
Confidence 579999999999999999999887543 322 34577899999999766664
No 132
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=46.32 E-value=1e+02 Score=32.28 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=47.9
Q ss_pred CCCCcEEEeeeccch-hHHHHHHHHHhCCCEEEEeecCCCCChHH---HHHHHHh--CCCeEEEecCCCHHHHHHHHHHH
Q 013345 51 PFKGAKITGSLHMTI-QTAVLIETLTALGAEVRWCSCNIFSTQDH---AAAAIAR--DSASVFAWKGETLQEYWWCTEKA 124 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~-kTa~li~tL~a~GAeV~~~~~np~STqd~---vaaaL~~--~Gi~V~A~~g~t~eey~~~~~~~ 124 (445)
-|+|+|+++.. .+ ...-|++.|.++|.+|..+++.-. +.++ +.+.|.. .|+....+-+.+..+..+.+.+
T Consensus 361 ~l~GKrvaI~g--d~~~~~~la~fL~elGm~vv~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~- 436 (523)
T 3u7q_B 361 WLHGKRFALWG--DPDFVMGLVKFLLELGCEPVHILCHNG-NKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFT- 436 (523)
T ss_dssp HHTTCEEEEEC--SHHHHHHHHHHHHHTTCEEEEEEETTC-CHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHH-
T ss_pred hcCCCEEEEEC--CchHHHHHHHHHHHcCCEEEEEEeCCC-CHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHh-
Confidence 37899999884 44 455688899999999998886433 3322 3333332 2322223445566554443332
Q ss_pred HhcCCCCCCcEEecCc
Q 013345 125 LDWGPGGGPDLIVDDG 140 (445)
Q Consensus 125 l~~~~~~~p~lilDDG 140 (445)
.+|++||=..
T Consensus 437 ------~~pDLlig~s 446 (523)
T 3u7q_B 437 ------DKPDFMIGNS 446 (523)
T ss_dssp ------TCCSEEEECT
T ss_pred ------cCCCEEEECc
Confidence 2589987544
No 133
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=46.17 E-value=21 Score=35.33 Aligned_cols=54 Identities=9% Similarity=0.115 Sum_probs=41.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHH
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHA 95 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~v 95 (445)
|..+++++. +|+|.+|+.+-....=--=++..|...|++|+++++.-|.-.+++
T Consensus 142 l~Ti~e~~g---~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 195 (309)
T 4f2g_A 142 IFTYYEHRG---PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKL 195 (309)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGG
T ss_pred HHHHHHHhC---CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 457888885 589999999998744333477888899999999987666555544
No 134
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=45.91 E-value=59 Score=30.73 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=31.3
Q ss_pred ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 62 HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 62 Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
|+. ....|++.|.+.|-+|++.+. .+....+...|++++...
T Consensus 17 hv~-~~~~La~~L~~~GheV~v~~~------~~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 17 HVY-PSLGLVSELARRGHRITYVTT------PLFADEVKAAGAEVVLYK 58 (402)
T ss_dssp HHH-HHHHHHHHHHHTTCEEEEEEC------HHHHHHHHHTTCEEEECC
T ss_pred ccc-cHHHHHHHHHhCCCEEEEEcC------HHHHHHHHHcCCEEEecc
Confidence 443 356789999999999998753 335566677899998765
No 135
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=45.36 E-value=47 Score=30.68 Aligned_cols=58 Identities=12% Similarity=0.046 Sum_probs=37.0
Q ss_pred CCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 78 GAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 78 GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
+++|...-|||-.-. ......+.|||++.+.- .+.++|...+.+.|... +|++|+=-|
T Consensus 27 ~~~I~~Vvs~~~~~~--~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~---~~Dliv~a~ 87 (209)
T 1meo_A 27 SAQIDIVISNKAAVA--GLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEF---SIDIVCLAG 87 (209)
T ss_dssp SCEEEEEEESSTTCH--HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHT---TCCEEEEES
T ss_pred CcEEEEEEeCCCChH--HHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhc---CCCEEEEcc
Confidence 799988887873322 22333567999986532 46677766666666532 588876554
No 136
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=44.77 E-value=97 Score=28.48 Aligned_cols=94 Identities=16% Similarity=0.070 Sum_probs=50.1
Q ss_pred hCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHH-HhCCCeEEEec-CCCH-HHHHHHHH
Q 013345 46 FGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAI-ARDSASVFAWK-GETL-QEYWWCTE 122 (445)
Q Consensus 46 ~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL-~~~Gi~V~A~~-g~t~-eey~~~~~ 122 (445)
.....+|+|.++.+.-=---==..+++.|.+.|++|++++-|+- ..++++..+ ...|..+..+. +.+. ++....++
T Consensus 13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE-EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 35567788887654322112224577889999999999876641 223344444 33355444433 3333 33334444
Q ss_pred HHHhcCCCCCCcEEecCcch
Q 013345 123 KALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 123 ~~l~~~~~~~p~lilDDGgd 142 (445)
++.+.- +++++++-..|-
T Consensus 92 ~~~~~~--g~iD~lvnnAg~ 109 (267)
T 1vl8_A 92 AVKEKF--GKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHH--SCCCEEEECCCC
T ss_pred HHHHHc--CCCCEEEECCCc
Confidence 444321 357888887763
No 137
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=44.68 E-value=35 Score=29.23 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=35.4
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEY 117 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey 117 (445)
.+++.|...|+++.+|+. --+.+..+|.+ ||.||...+.+.++-
T Consensus 70 ~~~~~L~~~gv~~VI~g~----iG~~a~~~L~~-GI~v~~~~~~~veea 113 (136)
T 2re2_A 70 FMLKSALDHGANALVLSE----IGSPGFNFIKN-KMDVYIVPEMPVADA 113 (136)
T ss_dssp HHHHHHHHTTCSEEEESC----CBHHHHHHHTT-TSEEEECCSCBHHHH
T ss_pred HHHHHHHHcCCCEEEECC----CCHhHHHHHHC-CCEEEEcCCCCHHHH
Confidence 678889999999999973 35667889999 999998776676663
No 138
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=44.04 E-value=66 Score=33.15 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=44.2
Q ss_pred HHHHHHHhCCCCCCCCcEEEeee---cc--ch-hH-HHHHHHHHhCCCEEEEeecCCCCChHHHHHH----HHhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSL---HM--TI-QT-AVLIETLTALGAEVRWCSCNIFSTQDHAAAA----IARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~l---Hl--t~-kT-a~li~tL~a~GAeV~~~~~np~STqd~vaaa----L~~~Gi~V~ 107 (445)
|..|+++|..-..|+|.+|+.+- |- -. .+ -=++..|...|++|+++++.-|.-.+++.+. +.+.|..+.
T Consensus 173 l~TI~E~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~ 252 (418)
T 2yfk_A 173 ALHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFT 252 (418)
T ss_dssp HHHHHHHTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEE
T ss_pred HHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEE
Confidence 56788888532238999999772 22 11 12 3467788899999999998766544444332 234576554
No 139
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=43.87 E-value=93 Score=32.25 Aligned_cols=78 Identities=18% Similarity=0.168 Sum_probs=48.1
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHH-HhCCCEEEEeecCCCCChH-HHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETL-TALGAEVRWCSCNIFSTQD-HAAAAIARDSASVFAWKGETLQEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL-~a~GAeV~~~~~np~STqd-~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~ 127 (445)
+.|.|+|+++.. =.....-+++.| .++|++|..+++ ++++.+ ...+.|...+-.|... .+..+. ++.+..
T Consensus 299 ~~l~Gkrv~i~g-d~~~~~~l~~~L~~elGm~vv~~gt-~~~~~~~~~~~~l~~~~~~v~~~--~D~~el----~~~i~~ 370 (511)
T 2xdq_B 299 QNLTGKKAVVFG-DNTHAAAMTKILSREMGIHVVWAGT-YCKYDADWFRAEVAGFCDEVLIT--DDHTVV----GDAIAR 370 (511)
T ss_dssp HTTTTCEEEEEE-CHHHHHHHHHHHHHHHCCEEEEEEE-SCGGGHHHHHHHHTTTSSEEEEC--CCHHHH----HHHHHH
T ss_pred HhccCCEEEEEc-CChHHHHHHHHHHHhCCCEEEEeec-CCCCchHHHHHHHHhcCCcEEEe--CCHHHH----HHHHHh
Confidence 678999999874 234455677888 799999987764 445543 3444555555555433 344443 333322
Q ss_pred CCCCCCcEEec
Q 013345 128 GPGGGPDLIVD 138 (445)
Q Consensus 128 ~~~~~p~lilD 138 (445)
.+|++++-
T Consensus 371 ---~~pDl~ig 378 (511)
T 2xdq_B 371 ---VEPAAIFG 378 (511)
T ss_dssp ---HCCSEEEE
T ss_pred ---cCCCEEEe
Confidence 15999883
No 140
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=43.35 E-value=43 Score=32.96 Aligned_cols=78 Identities=15% Similarity=-0.049 Sum_probs=48.8
Q ss_pred cEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCC--------ChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHH
Q 013345 55 AKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFS--------TQDHAAAAIARDSASVFAWKGETLQEYWWCTEKAL 125 (445)
Q Consensus 55 ~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~S--------Tqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l 125 (445)
.||..+- |++-| ..++.|.+.|.+|...-++|-. +...|.....+.||||+..+....++... .|
T Consensus 8 mrivf~G--t~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~----~l 81 (318)
T 3q0i_A 8 LRIVFAG--TPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQ----QL 81 (318)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHHHH----HH
T ss_pred CEEEEEe--cCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHHHH----HH
Confidence 4676655 55544 3357888889999888887632 23456666667899998765544444332 33
Q ss_pred hcCCCCCCcEEecCcc
Q 013345 126 DWGPGGGPDLIVDDGG 141 (445)
Q Consensus 126 ~~~~~~~p~lilDDGg 141 (445)
.. -+|++|+=-|-
T Consensus 82 ~~---~~~Dliv~~~y 94 (318)
T 3q0i_A 82 AA---LNADLMVVVAY 94 (318)
T ss_dssp HT---TCCSEEEESSC
T ss_pred Hh---cCCCEEEEeCc
Confidence 21 25888875553
No 141
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=43.14 E-value=63 Score=31.74 Aligned_cols=77 Identities=16% Similarity=0.006 Sum_probs=48.0
Q ss_pred EEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCC--------ChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHh
Q 013345 56 KITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFS--------TQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALD 126 (445)
Q Consensus 56 rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~S--------Tqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~ 126 (445)
||..+- |++-| ..++.|.+.|-+|...-++|-. +...|.....+.||||+-......++....+. +
T Consensus 6 rIvf~G--tp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~~l~---~ 80 (317)
T 3rfo_A 6 KVVFMG--TPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYEKVL---A 80 (317)
T ss_dssp EEEEEC--CSTTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHHHHH---H
T ss_pred EEEEEe--CCHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHHHHH---h
Confidence 454443 44433 3357888889999888777743 33556666677899999765554444433332 3
Q ss_pred cCCCCCCcEEecCcc
Q 013345 127 WGPGGGPDLIVDDGG 141 (445)
Q Consensus 127 ~~~~~~p~lilDDGg 141 (445)
+ +|++|+=-|-
T Consensus 81 ~----~~Dliv~~~y 91 (317)
T 3rfo_A 81 L----EPDLIVTAAF 91 (317)
T ss_dssp H----CCSEEEESSC
T ss_pred c----CCCEEEEcCc
Confidence 3 4888876653
No 142
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=42.69 E-value=68 Score=31.24 Aligned_cols=76 Identities=18% Similarity=0.037 Sum_probs=45.9
Q ss_pred EEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCC-----hHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 56 KITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFST-----QDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 56 rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~ST-----qd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
||...- |++-| .-++.|.+.|.+|...-|||-.- ...+.....+.||||+.......+++...+. ++
T Consensus 2 rivf~g--t~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~---~~-- 74 (305)
T 2bln_A 2 KTVVFA--YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIA---QL-- 74 (305)
T ss_dssp EEEEEE--CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHH---HT--
T ss_pred EEEEEE--cCHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHH---hc--
Confidence 444443 55533 34578888899998877776321 1235555566799999876655555544332 22
Q ss_pred CCCCcEEecCc
Q 013345 130 GGGPDLIVDDG 140 (445)
Q Consensus 130 ~~~p~lilDDG 140 (445)
+|++|+=-|
T Consensus 75 --~~Dliv~~~ 83 (305)
T 2bln_A 75 --SPDVIFSFY 83 (305)
T ss_dssp --CCSEEEEES
T ss_pred --CCCEEEEec
Confidence 488887554
No 143
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=42.64 E-value=43 Score=34.54 Aligned_cols=60 Identities=20% Similarity=0.113 Sum_probs=33.3
Q ss_pred CCCCCCcEEEeeeccchhHHH---HHHHHHhCCCEEEEeecCCCC-----ChHHHHHHHHhCCCeEEEec
Q 013345 49 SQPFKGAKITGSLHMTIQTAV---LIETLTALGAEVRWCSCNIFS-----TQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~---li~tL~a~GAeV~~~~~np~S-----Tqd~vaaaL~~~Gi~V~A~~ 110 (445)
..+|+|.+++ .+=-++-|-. +--....+|+.|...+.+=.| |-.|+|.-|... +.++..|
T Consensus 55 ~~~L~~~~~~-~lF~epSTRTR~SFE~A~~~LGg~vi~l~~~~ss~~kGEsl~DTarvLs~y-~D~IviR 122 (418)
T 2yfk_A 55 TKIFDSGLGI-SLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQISHGETVRETANMISFM-ADIIGIR 122 (418)
T ss_dssp CCCCSSCEEE-EEEC---CHHHHHHHHHHHHHTCEEEEECC--------CHHHHHHHHTTTT-EEEEEEE
T ss_pred cccccCCeEE-EEecCCCccHHHHHHHHHHHCCCeEEecCCCcccCCCCcCHHHHHHHHHHh-CcEEEEe
Confidence 3568887774 6655555543 334566899999766433212 445666666666 4555555
No 144
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=41.83 E-value=37 Score=34.17 Aligned_cols=69 Identities=7% Similarity=0.103 Sum_probs=48.0
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHH-HHHHHHHhCCCEEEEeecCCCCChHHHHHHH----HhCCCeEEE
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTA-VLIETLTALGAEVRWCSCNIFSTQDHAAAAI----ARDSASVFA 108 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa-~li~tL~a~GAeV~~~~~np~STqd~vaaaL----~~~Gi~V~A 108 (445)
|..|++.+ ..++|+|++|+.+-.+--.++ -+++.+...|++|+++++..|...+++...+ .+.|..+.-
T Consensus 167 l~Ti~e~~-~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~ 240 (358)
T 4h31_A 167 FLTMLEHS-QGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITL 240 (358)
T ss_dssp HHHHHHTT-TTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHh-cCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCccee
Confidence 34566655 345799999998876522333 4678888999999999988777777665544 234776643
No 145
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=41.72 E-value=1.3e+02 Score=29.30 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=57.8
Q ss_pred HhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec--
Q 013345 33 EVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-- 110 (445)
Q Consensus 33 ~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-- 110 (445)
++-.|++.++++++ ++.|++- |.+..++-+.|.+ ||.+.= +-+-+...++.+...++.|++|..-.
T Consensus 101 ~RvvpvI~~l~~~~-------~vpiSID---T~~~~V~~aAl~a-Ga~iIN-dvsg~~~d~~m~~~aa~~g~~vVlmh~~ 168 (297)
T 1tx2_A 101 KRVVPMIQAVSKEV-------KLPISID---TYKAEVAKQAIEA-GAHIIN-DIWGAKAEPKIAEVAAHYDVPIILMHNR 168 (297)
T ss_dssp HHHHHHHHHHHHHS-------CSCEEEE---CSCHHHHHHHHHH-TCCEEE-ETTTTSSCTHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHHhcC-------CceEEEe---CCCHHHHHHHHHc-CCCEEE-ECCCCCCCHHHHHHHHHhCCcEEEEeCC
Confidence 34568888888765 3444443 4577788788777 898872 22222234566666678899987744
Q ss_pred CCCH---------HHHHHHHHHHHhcCCCCCC-cEEecCcchh
Q 013345 111 GETL---------QEYWWCTEKALDWGPGGGP-DLIVDDGGDA 143 (445)
Q Consensus 111 g~t~---------eey~~~~~~~l~~~~~~~p-~lilDDGgdl 143 (445)
|... +.+...++.+.+. +-.+ ++|+|-|--+
T Consensus 169 G~p~y~d~v~ev~~~l~~~i~~a~~~--GI~~~~IilDPg~Gf 209 (297)
T 1tx2_A 169 DNMNYRNLMADMIADLYDSIKIAKDA--GVRDENIILDPGIGF 209 (297)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCTTS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHc--CCChhcEEEeCCCCc
Confidence 4322 3344444555543 1112 6999987543
No 146
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=40.57 E-value=24 Score=34.42 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=31.4
Q ss_pred ecHHHhhccCCEEEecCCCCC-CCCHHHHhcCcCCcEEeCCCCCc
Q 013345 269 LTLEDVLSDADIFVTTTGNKD-IIMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~~-vI~~eh~~~MKdgAILaN~Ghfd 312 (445)
...++++ .+|+||+||.... ++.. +.+|.|+.+..+|.+.
T Consensus 180 ~~~~e~v-~aDvVi~aTp~~~pv~~~---~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 180 QPAEEAS-RCDVLVTTTPSRKPVVKA---EWVEEGTHINAIGADG 220 (322)
T ss_dssp CCHHHHT-SSSEEEECCCCSSCCBCG---GGCCTTCEEEECSCCS
T ss_pred CCHHHHh-CCCEEEEeeCCCCceecH---HHcCCCeEEEECCCCC
Confidence 4678999 9999999999764 3332 4678999999998664
No 147
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=40.35 E-value=32 Score=31.89 Aligned_cols=109 Identities=13% Similarity=-0.079 Sum_probs=46.4
Q ss_pred HHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCC-eEEE
Q 013345 30 ELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA-SVFA 108 (445)
Q Consensus 30 ~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi-~V~A 108 (445)
.|..++.+....-...-.....++|.+|.+.-=-.-==..+++.|.+.|++|.+++-|+- ..++++..+.+.|- .+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~ 82 (286)
T 1xu9_A 4 QHQHQHQHQHQQPLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE-TLQKVVSHCLELGAASAHY 82 (286)
T ss_dssp -----------CCCSSCCCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHHTCSEEEE
T ss_pred hhhccchhhhccccccCCChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHHhCCCceEE
Confidence 466666554432111101122367877643321111123567788899999999886652 22334444443332 3322
Q ss_pred ec-CCCHH-HHHHHHHHHHhcCCCCCCcEEecC-cc
Q 013345 109 WK-GETLQ-EYWWCTEKALDWGPGGGPDLIVDD-GG 141 (445)
Q Consensus 109 ~~-g~t~e-ey~~~~~~~l~~~~~~~p~lilDD-Gg 141 (445)
.. +.+.. +....++++.+.- ++++++|-. +|
T Consensus 83 ~~~Dl~d~~~v~~~~~~~~~~~--g~iD~li~naag 116 (286)
T 1xu9_A 83 IAGTMEDMTFAEQFVAQAGKLM--GGLDMLILNHIT 116 (286)
T ss_dssp EECCTTCHHHHHHHHHHHHHHH--TSCSEEEECCCC
T ss_pred EeCCCCCHHHHHHHHHHHHHHc--CCCCEEEECCcc
Confidence 22 33333 3333333333221 257888877 55
No 148
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=40.28 E-value=65 Score=29.78 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.---.-==..+++.|.+.|++|.+++.|+-...+.+++.+.+.|..+.... +.+. ++....++++.+.-
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367776643221111124577888999999999887653333455666666665554443 3333 33333344444321
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+++++++-..|-
T Consensus 106 --g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 106 --GKLDIVCSNSGV 117 (283)
T ss_dssp --SCCCEEEECCCC
T ss_pred --CCCCEEEECCCc
Confidence 257898888773
No 149
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=40.18 E-value=39 Score=27.86 Aligned_cols=44 Identities=18% Similarity=0.055 Sum_probs=34.4
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCC-CHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGE-TLQE 116 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~-t~ee 116 (445)
.+++.|.+.|+++.+|+. --+.+.+.|.+.||.|+-.... +.+|
T Consensus 58 ~~~~~l~~~gv~~vi~~~----iG~~a~~~L~~~GI~v~~~~~g~~i~e 102 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTGY----VGPKAFQALQAAGIKVGQDLEGLTVRQ 102 (120)
T ss_dssp HHHHHHHHHTEEEEECSC----CCHHHHHHHHHTTCEEECCCTTSBHHH
T ss_pred HHHHHHHHCCCCEEEECC----CCHhHHHHHHHCCCEEEEcCCCCcHHH
Confidence 467888889999999883 3567889999999999876443 6655
No 150
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=39.95 E-value=1.4e+02 Score=26.40 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=44.4
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.+++-++-+..+++++.+...|..+..+. +.+ .++....++++.+.- +++++++-..|-
T Consensus 22 ~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~vi~~Ag~ 95 (258)
T 3afn_B 22 ATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF--GGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH--SSCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 567888999999999888744555667777766665554443 333 333333344443321 257888877763
No 151
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=39.93 E-value=2e+02 Score=26.13 Aligned_cols=90 Identities=12% Similarity=0.076 Sum_probs=51.8
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHh
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALD 126 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~ 126 (445)
...|+|.+|.+.---.-==..+++.|.+.|++|.+++-|+ +..++++..+.+.|..+..+. +.+ .++....++++.+
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK-HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH-HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3458888876543222223467888999999999988665 223445555655554443333 333 3334344444443
Q ss_pred cCCCCCCcEEecCcc
Q 013345 127 WGPGGGPDLIVDDGG 141 (445)
Q Consensus 127 ~~~~~~p~lilDDGg 141 (445)
.- ++++++|-..|
T Consensus 105 ~~--g~iD~li~~Ag 117 (272)
T 1yb1_A 105 EI--GDVSILVNNAG 117 (272)
T ss_dssp HT--CCCSEEEECCC
T ss_pred HC--CCCcEEEECCC
Confidence 21 35788888776
No 152
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=39.87 E-value=19 Score=36.92 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=31.9
Q ss_pred HhhccCCEEEecCC----CCCCCCHHHHhcC-cCCcEEeCCC
Q 013345 273 DVLSDADIFVTTTG----NKDIIMVDHMKKM-KNNAIVCNIG 309 (445)
Q Consensus 273 eA~~~aDifVTaTG----n~~vI~~eh~~~M-KdgAILaN~G 309 (445)
+.+..+||||+|.= .+..||.|+++.| |.|++++.+.
T Consensus 259 ~~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 259 DEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp THHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred hhHhhCCEEEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 45679999999875 3688999999999 9999999874
No 153
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=39.69 E-value=74 Score=30.06 Aligned_cols=88 Identities=7% Similarity=-0.010 Sum_probs=52.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t~-eey~~~~~~~l~~~ 128 (445)
.|+|+.+.+.-=-.-==...++.|.+.||.|.++.-|+ ..-+++++.+.+.|..+++.+. .+. ++-...++++.+.-
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~-~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLE-DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46666554321100011245688999999999988654 2235667777777877776653 333 34444455555432
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
++.|+++-+-|
T Consensus 83 --G~iDiLVNNAG 93 (254)
T 4fn4_A 83 --SRIDVLCNNAG 93 (254)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCc
Confidence 36899998877
No 154
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=39.52 E-value=1.8e+02 Score=24.86 Aligned_cols=90 Identities=13% Similarity=0.110 Sum_probs=58.9
Q ss_pred eccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-----EEEecC--------CCHHHHHHHHHHHHhc
Q 013345 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-----VFAWKG--------ETLQEYWWCTEKALDW 127 (445)
Q Consensus 61 lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-----V~A~~g--------~t~eey~~~~~~~l~~ 127 (445)
+.+.+...-+++.|++.|-.+.++++++.+.++.+...|...|+. |+.... ....+.+..+.+.+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~ 112 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI 112 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence 345677788899999999999999999888888888888888872 333221 1122444444444443
Q ss_pred CCCCCCcEEecCc--chhhHHhhhchh
Q 013345 128 GPGGGPDLIVDDG--GDATLLIHEGVK 152 (445)
Q Consensus 128 ~~~~~p~lilDDG--gdl~~~lh~g~~ 152 (445)
.+ .-.+.|+|. .|+...-.-|..
T Consensus 113 ~~--~~~l~VGD~~~~Di~~A~~aG~~ 137 (189)
T 3ib6_A 113 DK--TEAVMVGNTFESDIIGANRAGIH 137 (189)
T ss_dssp CG--GGEEEEESBTTTTHHHHHHTTCE
T ss_pred Cc--ccEEEECCCcHHHHHHHHHCCCe
Confidence 21 124888888 677665554443
No 155
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=39.07 E-value=2.1e+02 Score=26.29 Aligned_cols=87 Identities=18% Similarity=0.081 Sum_probs=47.3
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~~~l~~ 127 (445)
..|+|.++.+.-=-.-==..+++.|.+.||.|.+++.|+ +...+...+.|..+.... +.+.+ +....++++.+.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE----DKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 457888875432111112357788999999999987543 333333333344444333 33333 333334444332
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-.-|-
T Consensus 99 ~--g~iD~lvnnAg~ 111 (266)
T 3grp_A 99 M--EGIDILVNNAGI 111 (266)
T ss_dssp H--TSCCEEEECCCC
T ss_pred c--CCCCEEEECCCC
Confidence 1 358888888773
No 156
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=38.83 E-value=1.3e+02 Score=27.65 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=42.3
Q ss_pred HHHHHHHHhC--CCEEEEeecCCCCChHHHHHHHHhCCCeEEEec---CCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 68 AVLIETLTAL--GAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK---GETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 68 a~li~tL~a~--GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~---g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
..+++.+.+. +++|...-||+-.. .+.....+.|||++.+. -.+.++|...+.+.|.. .+|++|+=-|
T Consensus 15 ~ali~~~~~~~~~~~i~~Vis~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~---~~~Dliv~ag 87 (212)
T 1jkx_A 15 QAIIDACKTNKIKGTVRAVFSNKADA--FGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM---YAPDVVVLAG 87 (212)
T ss_dssp HHHHHHHHTTSSSSEEEEEEESCTTC--HHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG---GCCSEEEESS
T ss_pred HHHHHHHHcCCCCceEEEEEeCCCch--HHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh---cCCCEEEEeC
Confidence 3455666555 68998777775222 23333456799999753 24567777666666653 2588877554
No 157
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=38.65 E-value=1.4e+02 Score=27.91 Aligned_cols=94 Identities=15% Similarity=-0.049 Sum_probs=52.1
Q ss_pred CCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCC-CChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHHH
Q 013345 47 GPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF-STQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTEK 123 (445)
Q Consensus 47 ~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~-STqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~~ 123 (445)
.....|+|.++.+.-=-.-==..+++.|.+.|++|.++..+.- ...+.+++.+.+.|..+.... +.+.+ +....+++
T Consensus 42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 3445688887754332222224577889999999998765432 122334444555676665544 33333 33333444
Q ss_pred HHhcCCCCCCcEEecCcch
Q 013345 124 ALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 124 ~l~~~~~~~p~lilDDGgd 142 (445)
+.+.- +++++++-.-|-
T Consensus 122 ~~~~~--g~iD~lv~nAg~ 138 (294)
T 3r3s_A 122 AREAL--GGLDILALVAGK 138 (294)
T ss_dssp HHHHH--TCCCEEEECCCC
T ss_pred HHHHc--CCCCEEEECCCC
Confidence 44321 357888877663
No 158
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=38.40 E-value=21 Score=33.84 Aligned_cols=40 Identities=8% Similarity=-0.164 Sum_probs=24.1
Q ss_pred HHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEe
Q 013345 43 RAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWC 84 (445)
Q Consensus 43 ~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~ 84 (445)
.-.|-+.+||.|.||.+.=.-. ..-+.+.|.+.|++|..+
T Consensus 22 ~~~w~e~~pL~G~~VlvtR~~~--~~~l~~~L~~~G~~v~~~ 61 (286)
T 3d8t_A 22 ENLYFQGIDPFTMRIAYAGLRR--KEEFKALAEKLGFTPLLF 61 (286)
T ss_dssp -----------CCEEEECCSSC--HHHHHHHHHHHTCEEEEC
T ss_pred cCccccCCCCCCCEEEEeCCCc--hHHHHHHHHHCCCeEEEe
Confidence 3345567999999999886543 788999999999999753
No 159
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=38.16 E-value=27 Score=32.42 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=29.3
Q ss_pred cHHHhhccCCEEEecCCCC------CCCCHHHHhcCcCCcEEeCCCCC
Q 013345 270 TLEDVLSDADIFVTTTGNK------DIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~------~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
.++++ +.+|++|+||+.. .++. .+.++.|+++.+++--
T Consensus 165 ~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 165 PLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYR 208 (263)
T ss_dssp CGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCS
T ss_pred hHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecC
Confidence 55677 8999999999986 3343 4568899999888753
No 160
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=38.16 E-value=1.1e+02 Score=28.98 Aligned_cols=72 Identities=11% Similarity=-0.021 Sum_probs=48.2
Q ss_pred hHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHH
Q 013345 38 GLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEY 117 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey 117 (445)
.+.+++++|. +..|+...-++.+ -++...+.||+..++.+ +..+++.+..+.|++++.= -.|+.|-
T Consensus 75 ~I~~l~~~~~------~~~iGaGTVlt~~---~a~~Ai~AGA~fIvsP~----~~~~vi~~~~~~gi~~ipG-v~TptEi 140 (232)
T 4e38_A 75 AIRLLRQAQP------EMLIGAGTILNGE---QALAAKEAGATFVVSPG----FNPNTVRACQEIGIDIVPG-VNNPSTV 140 (232)
T ss_dssp HHHHHHHHCT------TCEEEEECCCSHH---HHHHHHHHTCSEEECSS----CCHHHHHHHHHHTCEEECE-ECSHHHH
T ss_pred HHHHHHHhCC------CCEEeECCcCCHH---HHHHHHHcCCCEEEeCC----CCHHHHHHHHHcCCCEEcC-CCCHHHH
Confidence 4556677772 4667766555544 45777889999998643 5567888888889998653 2377663
Q ss_pred HHHHHHHHhc
Q 013345 118 WWCTEKALDW 127 (445)
Q Consensus 118 ~~~~~~~l~~ 127 (445)
.++++.
T Consensus 141 ----~~A~~~ 146 (232)
T 4e38_A 141 ----EAALEM 146 (232)
T ss_dssp ----HHHHHT
T ss_pred ----HHHHHc
Confidence 455553
No 161
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=37.37 E-value=1.2e+02 Score=27.29 Aligned_cols=69 Identities=20% Similarity=0.116 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
..+++.|.+.|++|++++.|+- +.+++.+.+.|..+..+. +.+. ++....++++.+.- +++++++-..|
T Consensus 18 ~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~--g~id~lv~~Ag 88 (255)
T 2q2v_A 18 LGIAQVLARAGANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF--GGVDILVNNAG 88 (255)
T ss_dssp HHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH--SSCSEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 3567889999999999887653 556677766665555443 3333 33333444443321 25788888776
No 162
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=37.15 E-value=55 Score=32.59 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=38.1
Q ss_pred HHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCccccccccccc
Q 013345 271 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLET 322 (445)
Q Consensus 271 l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~ 322 (445)
+.+.++.+|++|+....+..|+.+.++++++=.+++..|..-+=||++...+
T Consensus 56 ~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~ 107 (351)
T 3jtm_A 56 LEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAA 107 (351)
T ss_dssp HHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHH
T ss_pred HHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHh
Confidence 5677788898887544445688888888888788887776656688776544
No 163
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=36.94 E-value=1.9e+02 Score=26.66 Aligned_cols=91 Identities=20% Similarity=0.193 Sum_probs=50.6
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-----CCCeEEEec-CCC-HHHHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-----DSASVFAWK-GET-LQEYWWC 120 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-----~Gi~V~A~~-g~t-~eey~~~ 120 (445)
....|+|.+|.+.---.-==..+++.|.+.|++|++++-|+ +.-+++++.+.. .+..+.... +.+ .++....
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 90 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL-ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 90 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence 34467888775443222222457788999999999988664 222344455543 344443333 333 3344444
Q ss_pred HHHHHhcCCCCCCcEEecCcc
Q 013345 121 TEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 121 ~~~~l~~~~~~~p~lilDDGg 141 (445)
++++.+.- +++++++-..|
T Consensus 91 ~~~~~~~~--g~id~li~~Ag 109 (303)
T 1yxm_A 91 VKSTLDTF--GKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHc--CCCCEEEECCC
Confidence 44444321 25888888777
No 164
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.74 E-value=84 Score=28.36 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.++..+.-..-+.+++.+...|..++..+. .+ .++....++++.+.- +++++++-.-|-
T Consensus 19 ~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~id~lv~nAg~ 92 (246)
T 3osu_A 19 SIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF--GSLDVLVNNAGI 92 (246)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 4678899999999987654333345566666666766655443 33 333344444444321 357888887763
No 165
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=36.58 E-value=80 Score=29.28 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHh
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALD 126 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~ 126 (445)
...|+|.++.+.-=-.-==..+++.|.+.||.|.++..+.-...+.+++.+.+.|..+.... +.+ .++....++++.+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34688888654321111124577889999999999866554444566666766666554443 333 3344444555544
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.- +++++++-.-|-
T Consensus 106 ~~--g~iD~lvnnAg~ 119 (271)
T 3v2g_A 106 AL--GGLDILVNSAGI 119 (271)
T ss_dssp HH--SCCCEEEECCCC
T ss_pred Hc--CCCcEEEECCCC
Confidence 32 358888887773
No 166
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=36.36 E-value=1.2e+02 Score=31.55 Aligned_cols=77 Identities=18% Similarity=0.163 Sum_probs=45.4
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHH-HhCCCEEEEeecCCCCChHHHHH-HHHhCCCeEEEecCCCHHHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETL-TALGAEVRWCSCNIFSTQDHAAA-AIARDSASVFAWKGETLQEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL-~a~GAeV~~~~~np~STqd~vaa-aL~~~Gi~V~A~~g~t~eey~~~~~~~l~~ 127 (445)
+.|.|+|+++.. =.....-+++.| .++|.+|..+++ +...+.+-.. .+...+..|... .+..+ +++.+..
T Consensus 276 ~~l~GKrv~i~g-d~~~~~~la~~L~~ElGm~vv~~gt-~~~~~~~~~~~~~~~~~~~v~i~--~D~~e----l~~~i~~ 347 (525)
T 3aek_B 276 TYLTGKRVFIFG-DGTHVIAAARIAAKEVGFEVVGMGC-YNREMARPLRTAAAEYGLEALIT--DDYLE----VEKAIEA 347 (525)
T ss_dssp GGGTTCEEEECS-SHHHHHHHHHHHHHTTCCEEEEEEE-SCGGGHHHHHHHHHHTTCCCEEC--SCHHH----HHHHHHH
T ss_pred hhcCCCEEEEEc-CchHHHHHHHHHHHHcCCeeEEEec-CchhHHHHHHHHHHhcCCcEEEe--CCHHH----HHHHHhh
Confidence 678999999763 233455567778 799999988775 5555544333 334445444332 23433 3333321
Q ss_pred CCCCCCcEEe
Q 013345 128 GPGGGPDLIV 137 (445)
Q Consensus 128 ~~~~~p~lil 137 (445)
.+|+++|
T Consensus 348 ---~~pDL~i 354 (525)
T 3aek_B 348 ---AAPELIL 354 (525)
T ss_dssp ---HCCSEEE
T ss_pred ---cCCCEEE
Confidence 1589988
No 167
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=36.26 E-value=63 Score=31.67 Aligned_cols=65 Identities=6% Similarity=-0.131 Sum_probs=40.8
Q ss_pred HHHHHHhCCCEEEEeecCCCC--------ChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 70 LIETLTALGAEVRWCSCNIFS--------TQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 70 li~tL~a~GAeV~~~~~np~S--------Tqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
.++.|.+.|-+|...-++|-. +...|.....+.||||+..+....++....+ -++ +|++|+=-|-
T Consensus 17 ~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l---~~~----~~Dliv~~~~ 89 (314)
T 3tqq_A 17 TLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQEKL---IAM----NADVMVVVAY 89 (314)
T ss_dssp HHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHHHH---HTT----CCSEEEEESC
T ss_pred HHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHHHH---Hhc----CCCEEEEcCc
Confidence 358888889999877776632 2345666666789999976555444443322 222 5888775543
No 168
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=36.19 E-value=67 Score=30.80 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=34.7
Q ss_pred cEEEeee-----ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 55 AKITGSL-----HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 55 ~rI~~~l-----Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
.||.++. |+.+ ...|++.|.+.|-+|++++.. +....+...|++++....
T Consensus 21 ~rIl~~~~~~~GHv~p-~l~La~~L~~~Gh~V~v~~~~------~~~~~~~~~G~~~~~~~~ 75 (415)
T 3rsc_A 21 AHLLIVNVASHGLILP-TLTVVTELVRRGHRVSYVTAG------GFAEPVRAAGATVVPYQS 75 (415)
T ss_dssp CEEEEECCSCHHHHGG-GHHHHHHHHHTTCEEEEEECG------GGHHHHHHTTCEEEECCC
T ss_pred CEEEEEeCCCcccccc-HHHHHHHHHHCCCEEEEEeCH------HHHHHHHhcCCEEEeccc
Confidence 3566553 5443 567899999999999987631 234456677999987653
No 169
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=36.15 E-value=2.5e+02 Score=25.51 Aligned_cols=92 Identities=17% Similarity=0.107 Sum_probs=50.6
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCC--------CCChHHHH---HHHHhCCCeEEEec-CCCH-
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNI--------FSTQDHAA---AAIARDSASVFAWK-GETL- 114 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np--------~STqd~va---aaL~~~Gi~V~A~~-g~t~- 114 (445)
...+|+|.++.+.-=-.-==..+++.|.+.|++|.++.-+. ..+.+... ..+...|..+.... +.+.
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 35678998876433222222357788999999999987652 22344333 33333455554443 3333
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 115 QEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 115 eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
++....++++.+.- +++++++-.-|
T Consensus 87 ~~v~~~~~~~~~~~--g~id~lv~nAg 111 (278)
T 3sx2_A 87 ESLSAALQAGLDEL--GRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHHHH--CCCCEEEECCC
T ss_pred HHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 33334444444321 35888888777
No 170
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=35.79 E-value=67 Score=29.00 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=40.2
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~ 123 (445)
+|.+.++..++.++.. .+.+++....|.+.||||+.....+.+++.+.+..
T Consensus 50 ~E~i~~l~PDLIi~~~--~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~ 100 (245)
T 1n2z_A 50 LERIVALKPDLVIAWR--GGNAERQVDQLASLGIKVMWVDATSIEQIANALRQ 100 (245)
T ss_dssp HHHHHHTCCSEEEECT--TTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHH
T ss_pred HHHHhccCCCEEEEeC--CCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHH
Confidence 6999999999998743 23456788899989999998877777887776654
No 171
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=35.75 E-value=29 Score=28.42 Aligned_cols=44 Identities=23% Similarity=0.383 Sum_probs=33.4
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
.+++.|...|+++.+|+. + -+.+...|.+.||.|+.....+.+|
T Consensus 53 ~~~~~l~~~gv~~vi~~~-i---G~~a~~~L~~~GI~v~~~~~~~i~e 96 (116)
T 1rdu_A 53 KVVQSLVSKGVEYLIASN-V---GRNAFETLKAAGVKVYRFEGGTVQE 96 (116)
T ss_dssp SHHHHHHTTTCCEEECSS-C---CSSCHHHHHTTTCEEECCCSCBHHH
T ss_pred HHHHHHHHcCCCEEEECC-C---CHhHHHHHHHCCCEEEECCCCCHHH
Confidence 367888899999999874 2 2346788999999999765556655
No 172
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=35.37 E-value=71 Score=32.30 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=40.2
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEE
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVF 107 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~ 107 (445)
..|+|.||.+.--=..-.+ .++.|.+.|++|.++-.++.. .+.....|.+.||+++
T Consensus 5 ~~~~~k~v~viG~G~sG~s-~A~~l~~~G~~V~~~D~~~~~-~~~~~~~L~~~gi~~~ 60 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEA-AARLLAKLGAIVTVNDGKPFD-ENPTAQSLLEEGIKVV 60 (451)
T ss_dssp CTTTTCEEEEECCTTTHHH-HHHHHHHTTCEEEEEESSCGG-GCHHHHHHHHTTCEEE
T ss_pred hhcCCCEEEEEeeCHHHHH-HHHHHHhCCCEEEEEeCCccc-CChHHHHHHhCCCEEE
Confidence 4578888865443333334 499999999999988766643 3456778888999987
No 173
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=35.23 E-value=1.4e+02 Score=29.36 Aligned_cols=81 Identities=17% Similarity=0.092 Sum_probs=54.0
Q ss_pred ChhHHHHHHHhCCCCCCCCcEEEeee-----ccchhHHHHHHHHHhCCCEEEEeec-C--C-------CCChHHHHHHHH
Q 013345 36 MPGLMACRAEFGPSQPFKGAKITGSL-----HMTIQTAVLIETLTALGAEVRWCSC-N--I-------FSTQDHAAAAIA 100 (445)
Q Consensus 36 MP~L~~l~~~~~~~kPl~G~rI~~~l-----Hlt~kTa~li~tL~a~GAeV~~~~~-n--p-------~STqd~vaaaL~ 100 (445)
.-++.++|+...++.|+ |+||+..- .-..++..+++.|.+.|++..-.++ . + -..+-+.++.+.
T Consensus 206 ~eiv~aVR~avG~d~pV-~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir 284 (349)
T 3hgj_A 206 LQVAQAVREVVPRELPL-FVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVR 284 (349)
T ss_dssp HHHHHHHHHHSCTTSCE-EEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceE-EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHH
Confidence 44678889999888776 88988631 1124678889999999998765543 1 1 012345666665
Q ss_pred hC-CCeEEEecCC-CHHHH
Q 013345 101 RD-SASVFAWKGE-TLQEY 117 (445)
Q Consensus 101 ~~-Gi~V~A~~g~-t~eey 117 (445)
+. ++||.+--|- |.++-
T Consensus 285 ~~~~iPVi~~Ggi~t~e~a 303 (349)
T 3hgj_A 285 KRVGLRTGAVGLITTPEQA 303 (349)
T ss_dssp HHHCCEEEECSSCCCHHHH
T ss_pred HHcCceEEEECCCCCHHHH
Confidence 53 8999887664 56554
No 174
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=35.17 E-value=72 Score=34.03 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=35.8
Q ss_pred EEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 56 KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 56 rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
|+-+|..=-..-.-+++.|.++|-+|..|+. .+..|.+.||+|-.-..
T Consensus 26 raLISV~DK~glv~~Ak~L~~lGfeI~ATgG--------Tak~L~e~GI~v~~V~k 73 (534)
T 4ehi_A 26 RALLSVSDKEGIVEFGKELENLGFEILSTGG--------TFKLLKENGIKVIEVSD 73 (534)
T ss_dssp EEEEEESSCTTHHHHHHHHHHTTCEEEECHH--------HHHHHHHTTCCCEECBC
T ss_pred EEEEEEcccccHHHHHHHHHHCCCEEEEccH--------HHHHHHHCCCceeehhh
Confidence 4444444345556789999999999987765 78899999999865443
No 175
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=34.86 E-value=56 Score=34.77 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=71.0
Q ss_pred cEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCc
Q 013345 55 AKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPD 134 (445)
Q Consensus 55 ~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~ 134 (445)
.|+-+|+.--..-.-+++.|.++|-+|..|+. .+..|.+.||+|-.- .++-.+ |.
T Consensus 11 ~~aLISVsDK~glvelAk~L~~lGfeI~ATgG--------Tak~L~e~GI~v~~V------------~~vTgf-----PE 65 (523)
T 3zzm_A 11 RRALISVYDKTGLVDLAQGLSAAGVEIISTGS--------TAKTIADTGIPVTPV------------EQLTGF-----PE 65 (523)
T ss_dssp CEEEEEESSCTTHHHHHHHHHHTTCEEEECHH--------HHHHHHTTTCCCEEH------------HHHHSC-----CC
T ss_pred cEEEEEEeccccHHHHHHHHHHCCCEEEEcch--------HHHHHHHcCCceeec------------cccCCC-----ch
Confidence 35555555555567789999999999987775 789999999998532 333333 44
Q ss_pred EEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHH
Q 013345 135 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLY 214 (445)
Q Consensus 135 lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~ 214 (445)
++ ||- +. +-+|.+-..|++.-..- ....
T Consensus 66 il---~GR-VK--------------------------------------------TLHP~ihgGiLa~r~~~----~h~~ 93 (523)
T 3zzm_A 66 VL---DGR-VK--------------------------------------------TLHPRVHAGLLADLRKS----EHAA 93 (523)
T ss_dssp CT---TTT-SS--------------------------------------------SCSHHHHHHHHCCTTSH----HHHH
T ss_pred hh---CCc-cc--------------------------------------------cCCchhhhhhccCCCCH----HHHH
Confidence 42 221 12 33465556666642211 2367
Q ss_pred HHHHcCCccccEEEeecccccccc
Q 013345 215 QMQENGTLLFPAINVNDSVTKSKF 238 (445)
Q Consensus 215 ~m~~~g~L~~Pvi~VNdS~tK~~f 238 (445)
+|.+.|.-++=++.||-=+.+...
T Consensus 94 ~l~~~~i~~iDlVvvNLYPF~~tv 117 (523)
T 3zzm_A 94 ALEQLGIEAFELVVVNLYPFSQTV 117 (523)
T ss_dssp HHHHHTCCCCSEEEEECCCHHHHH
T ss_pred HHHHCCCCceeEEEEeCCChHHHH
Confidence 888999999999999987765544
No 176
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=34.84 E-value=47 Score=32.62 Aligned_cols=57 Identities=7% Similarity=0.062 Sum_probs=36.8
Q ss_pred CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe--cCCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 77 LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW--KGETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 77 ~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~--~g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
++++|...-||.-. +.....+.|||++.+ +..+.++|...+.+.|+. .+|++|+=-|
T Consensus 131 l~~~I~~Visn~~~----~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~---~~~DliVlag 189 (302)
T 3o1l_A 131 LDCDIACVISNHQD----LRSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGH---HQADVVVLAR 189 (302)
T ss_dssp SCSEEEEEEESSST----THHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHH---TTCSEEEESS
T ss_pred CCcEEEEEEECcHH----HHHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHH---hCCCEEEHhH
Confidence 47899877766533 322224569999987 455677777767666653 2588876544
No 177
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=34.81 E-value=1.8e+02 Score=26.36 Aligned_cols=89 Identities=13% Similarity=0.030 Sum_probs=48.5
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC--CCeEEEec-CCCH-HHHHHHHHHHH
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD--SASVFAWK-GETL-QEYWWCTEKAL 125 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~--Gi~V~A~~-g~t~-eey~~~~~~~l 125 (445)
..|+|.++.+.---.-==..+++.|.+.|++|.+++-|+ ..-+++++.+.+. |..+.... +.+. ++....++++.
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS-EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 457787765432211222457788999999999988765 2223444455433 44443332 3343 33334444444
Q ss_pred hcCCCCCCcEEecCcc
Q 013345 126 DWGPGGGPDLIVDDGG 141 (445)
Q Consensus 126 ~~~~~~~p~lilDDGg 141 (445)
+.- +++++++-..|
T Consensus 88 ~~~--g~id~lv~nAg 101 (267)
T 1iy8_A 88 ERF--GRIDGFFNNAG 101 (267)
T ss_dssp HHH--SCCSEEEECCC
T ss_pred HHc--CCCCEEEECCC
Confidence 321 35788888776
No 178
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=34.35 E-value=79 Score=29.66 Aligned_cols=83 Identities=12% Similarity=-0.039 Sum_probs=50.5
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHH
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-------DSASVFAWKGETLQEYWWCTE 122 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-------~Gi~V~A~~g~t~eey~~~~~ 122 (445)
.++++.||.+.-=---==..+++.|.+.|.+|+.+.-++-+.... ...+.. .++.++.. +.+.. ..+.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Dl~d~---~~~~ 95 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYN-LDEVKTLVSTEQWSRFCFIEG-DIRDL---TTCE 95 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH-HHHHHHTSCHHHHTTEEEEEC-CTTCH---HHHH
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hhhhhhccccccCCceEEEEc-cCCCH---HHHH
Confidence 345677776533222223467788889999999988776555443 344433 57777644 22222 2344
Q ss_pred HHHhcCCCCCCcEEecCcch
Q 013345 123 KALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 123 ~~l~~~~~~~p~lilDDGgd 142 (445)
++++ ++++|+...|.
T Consensus 96 ~~~~-----~~d~Vih~A~~ 110 (351)
T 3ruf_A 96 QVMK-----GVDHVLHQAAL 110 (351)
T ss_dssp HHTT-----TCSEEEECCCC
T ss_pred HHhc-----CCCEEEECCcc
Confidence 5554 58999998884
No 179
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=34.30 E-value=67 Score=29.61 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=29.7
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEE
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVR 82 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~ 82 (445)
..+.|+|.+|-++-...+....+.+.+.++|+.|.
T Consensus 119 ~~~LF~G~~f~it~~~~~~~~~l~~lI~~~GG~v~ 153 (219)
T 3sqd_A 119 VSPLFKAKYFYITPGICPSLSTMKAIVECAGGKVL 153 (219)
T ss_dssp HSCTTTTEEEEECTTCSSCHHHHHHHHHHTTCEEE
T ss_pred cccccCCcEEEEeCCCCCCHHHHHHHHHHCCCEEE
Confidence 56899999998877777777788899999999885
No 180
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=34.24 E-value=49 Score=33.36 Aligned_cols=49 Identities=24% Similarity=0.194 Sum_probs=37.7
Q ss_pred cHHHhhccCCEEEecC----CC------------CCCCCHHHHhc--CcCCcEEeCCCCCc-cccccc
Q 013345 270 TLEDVLSDADIFVTTT----GN------------KDIIMVDHMKK--MKNNAIVCNIGHFD-NEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTaT----Gn------------~~vI~~eh~~~--MKdgAILaN~Ghfd-~EId~~ 318 (445)
.+++|++.+|+++|-+ |. .=.|+.+-|++ +|+++|+.-.+=.. +||+-+
T Consensus 251 d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcLP~~~~EI~~e 318 (353)
T 3sds_A 251 VPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCLPRHPEEVSDE 318 (353)
T ss_dssp CHHHHTTTCSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECSCCCTTTBCHH
T ss_pred CHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCCCCCCCeECHH
Confidence 6899999999999855 42 12589999998 89999998777554 688743
No 181
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=34.06 E-value=77 Score=30.31 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=39.1
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~ 123 (445)
+|.+.++..++.+++.. ..+....|.+.|+||+.....+.+++...+..
T Consensus 109 ~E~i~al~PDLIi~~~~----~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~ 157 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK----LKKTADTLESLGIKAVVVNPEDQSLLEECITL 157 (335)
T ss_dssp HHHHHHTCCSEEEEEGG----GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEeCc----chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHH
Confidence 58999999999998642 46788899999999999877777777666644
No 182
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=33.94 E-value=2.2e+02 Score=27.43 Aligned_cols=95 Identities=17% Similarity=0.054 Sum_probs=55.2
Q ss_pred hChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCC
Q 013345 35 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGET 113 (445)
Q Consensus 35 ~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t 113 (445)
.++++-+...-+...+.-.|.+|.+.- -..==...+..+++.||+|..+.+++ + -.+.+.+.|.. ++- + +
T Consensus 171 ~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~----~-~~~~~~~lGa~~vi~-~--~ 241 (363)
T 3uog_A 171 PCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR----E-KLDRAFALGADHGIN-R--L 241 (363)
T ss_dssp TTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCH----H-HHHHHHHHTCSEEEE-T--T
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCc----h-hHHHHHHcCCCEEEc-C--C
Confidence 445666665554455555799988765 33333345567778999999877543 2 22234445765 433 2 2
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 114 LQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 114 ~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
.+++...+.+... +.++++++|.-|
T Consensus 242 ~~~~~~~v~~~~~---g~g~D~vid~~g 266 (363)
T 3uog_A 242 EEDWVERVYALTG---DRGADHILEIAG 266 (363)
T ss_dssp TSCHHHHHHHHHT---TCCEEEEEEETT
T ss_pred cccHHHHHHHHhC---CCCceEEEECCC
Confidence 2344444444432 236899999766
No 183
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.76 E-value=1.1e+02 Score=27.82 Aligned_cols=71 Identities=15% Similarity=0.009 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|.+++-|+ +.-+++++.+.+.|..+.... +.+. ++....++++.+. +++++++-.-|-
T Consensus 21 ~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---g~id~lv~nAg~ 93 (252)
T 3h7a_A 21 AEIAKKFAAEGFTVFAGRRNG-EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH---APLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHHTTCEEEEEESSG-GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH---SCEEEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh---CCceEEEECCCc
Confidence 357788999999999998766 344567777777776665554 3333 3444444444443 357888887773
No 184
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=33.66 E-value=34 Score=32.28 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=29.3
Q ss_pred cHHHhhccCCEEEecCCCCC------CCCHHHHhcCcCCcEEeCCCC
Q 013345 270 TLEDVLSDADIFVTTTGNKD------IIMVDHMKKMKNNAIVCNIGH 310 (445)
Q Consensus 270 ~l~eA~~~aDifVTaTGn~~------vI~~eh~~~MKdgAILaN~Gh 310 (445)
.++++++.+|++|.||+... +|. ...++.|+++.+++-
T Consensus 179 ~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 179 SPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred hHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 56788899999999998753 232 456788999988776
No 185
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=33.57 E-value=1.4e+02 Score=27.29 Aligned_cols=87 Identities=10% Similarity=-0.006 Sum_probs=50.5
Q ss_pred CCCCcEEEeee---ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC-CCeEEEec-CCC-HHHHHHHHHHH
Q 013345 51 PFKGAKITGSL---HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD-SASVFAWK-GET-LQEYWWCTEKA 124 (445)
Q Consensus 51 Pl~G~rI~~~l---Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~-Gi~V~A~~-g~t-~eey~~~~~~~ 124 (445)
.|+|+++.+.- .--.- ...++.|.+.||.|.+++-|. ...+++++.+.+. +..+++.+ +.+ .++-...++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG-~aiA~~la~~Ga~Vvi~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIA-FGVAKVLDQLGAKLVFTYRKE-RSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCTTCEEEEECCCSTTCHH-HHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHH-HHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 46777655422 00011 345788999999999998764 3456666666554 33444333 333 44444555555
Q ss_pred HhcCCCCCCcEEecCcc
Q 013345 125 LDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 125 l~~~~~~~p~lilDDGg 141 (445)
.+.- ++.++++-+-|
T Consensus 81 ~~~~--G~iD~lvnnAg 95 (256)
T 4fs3_A 81 GKDV--GNIDGVYHSIA 95 (256)
T ss_dssp HHHH--CCCSEEEECCC
T ss_pred HHHh--CCCCEEEeccc
Confidence 5431 36888887765
No 186
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=33.45 E-value=1.2e+02 Score=27.87 Aligned_cols=87 Identities=10% Similarity=0.017 Sum_probs=49.8
Q ss_pred CCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCC
Q 013345 52 FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGP 129 (445)
Q Consensus 52 l~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~ 129 (445)
|+|.++.+.-=-.-==..+++.|.+.|++|++++-|+ +..+++++.+.+.|..+..+. +.+ .++....++++.+.-
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 97 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE-EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY- 97 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 6777654432111222456788999999999988765 233445566665565444333 333 334444444444332
Q ss_pred CCCCcEEecCcc
Q 013345 130 GGGPDLIVDDGG 141 (445)
Q Consensus 130 ~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 98 -g~iD~lv~~Ag 108 (277)
T 2rhc_B 98 -GPVDVLVNNAG 108 (277)
T ss_dssp -CSCSEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 35888888877
No 187
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=32.82 E-value=2e+02 Score=25.89 Aligned_cols=91 Identities=9% Similarity=-0.023 Sum_probs=48.0
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHhc
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD-SASVFAWKGETLQEYWWCTEKALDW 127 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~-Gi~V~A~~g~t~eey~~~~~~~l~~ 127 (445)
..+|+|.+|.+.-=-.-==..+++.|.+.|++|+++..++- ..+.++..+... .+.++..-=.+.++....++++.+.
T Consensus 11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD-HGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChh-HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 44578887654332222234577888999999999876531 112333333222 3444433222333444444444332
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 90 ~--~~id~li~~Ag~ 102 (278)
T 2bgk_A 90 H--GKLDIMFGNVGV 102 (278)
T ss_dssp H--SCCCEEEECCCC
T ss_pred c--CCCCEEEECCcc
Confidence 1 257888877663
No 188
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=32.38 E-value=53 Score=30.68 Aligned_cols=54 Identities=9% Similarity=0.009 Sum_probs=34.4
Q ss_pred HHHHHHHHhh-h-cccCCcchhhhhhhhccccchhHHHH-HHHHHHHHcCCccccEEEeecccccccc
Q 013345 174 FQIVLTIIRD-G-LKADPKKYHKMKERLVGVSEETTTGV-KRLYQMQENGTLLFPAINVNDSVTKSKF 238 (445)
Q Consensus 174 ~~~~~~~l~~-~-~~~~~~~~~~~~~~i~Gv~EETTTGv-~Rl~~m~~~g~L~~Pvi~VNdS~tK~~f 238 (445)
...+...+++ . ...+.. .=++|.+|-.+-.+ .++++ .+..|||..|.+...+..
T Consensus 164 ~~~~~~~~~~~l~~~~~ad------aivL~CT~l~~l~~i~~le~-----~lg~PVids~~a~~w~~l 220 (240)
T 3ixl_A 164 TATLVDLCVRAFEAAPDSD------GILLSSGGLLTLDAIPEVER-----RLGVPVVSSSPAGFWDAV 220 (240)
T ss_dssp HHHHHHHHHHHHHTSTTCS------EEEEECTTSCCTTHHHHHHH-----HHSSCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCC------EEEEeCCCCchhhhHHHHHH-----HhCCCEEeHHHHHHHHHH
Confidence 4467777777 3 222222 23889888877663 44544 367999999987666544
No 189
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.18 E-value=1e+02 Score=28.42 Aligned_cols=91 Identities=21% Similarity=0.139 Sum_probs=52.5
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~~~l~~ 127 (445)
.+|+|.++.+.-=-.-==..+++.|.+.||+|.++..+.-...+.+++.+.+.|..++... +.+.+ +....++++.+.
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578887654221111123577889999999998776333344566666766666665544 33333 333334444432
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 104 ~--g~id~lv~nAg~ 116 (269)
T 4dmm_A 104 W--GRLDVLVNNAGI 116 (269)
T ss_dssp H--SCCCEEEECCCC
T ss_pred c--CCCCEEEECCCC
Confidence 1 358888887763
No 190
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=32.07 E-value=1.6e+02 Score=26.26 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=43.3
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CC-CHHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GE-TLQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~-t~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.+++.|+ +..+++...+.+.|..+.... +. +.++....++++.+.. +++++++-..|-
T Consensus 20 ~~a~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~li~~Ag~ 92 (247)
T 3lyl_A 20 EVAHALASKGATVVGTATSQ-ASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN--LAIDILVNNAGI 92 (247)
T ss_dssp HHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT--CCCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 56788999999999988655 233455566666665554333 33 3334444444544432 368888887763
No 191
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=31.94 E-value=2.2e+02 Score=27.18 Aligned_cols=97 Identities=16% Similarity=0.045 Sum_probs=54.2
Q ss_pred hhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCC
Q 013345 34 VEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGE 112 (445)
Q Consensus 34 ~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~ 112 (445)
--.|++-+...-+...+.-.|.+|.+.-=-..==...++.+++.||+|..+.+++- +-+.+ .+.|.. ++-.+
T Consensus 140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~---~~~ga~~v~~~~-- 212 (342)
T 4eye_A 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA--ATEFV---KSVGADIVLPLE-- 212 (342)
T ss_dssp HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGG--GHHHH---HHHTCSEEEESS--
T ss_pred hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHH---HhcCCcEEecCc--
Confidence 34566666665555556667988864431122223445667789999998887552 22222 334655 33333
Q ss_pred CHHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 113 TLQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 113 t~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
+++...+.+.. ++.+.++++|.-|.
T Consensus 213 --~~~~~~v~~~~---~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 213 --EGWAKAVREAT---GGAGVDMVVDPIGG 237 (342)
T ss_dssp --TTHHHHHHHHT---TTSCEEEEEESCC-
T ss_pred --hhHHHHHHHHh---CCCCceEEEECCch
Confidence 33444444432 23368999998664
No 192
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=31.80 E-value=29 Score=34.79 Aligned_cols=45 Identities=31% Similarity=0.398 Sum_probs=34.9
Q ss_pred Ccceec-HHHhhccCCEEEecC--CCC-CCCCHHHHhcCcCCcEEeCCC
Q 013345 265 GLQVLT-LEDVLSDADIFVTTT--GNK-DIIMVDHMKKMKNNAIVCNIG 309 (445)
Q Consensus 265 Gf~V~~-l~eA~~~aDifVTaT--Gn~-~vI~~eh~~~MKdgAILaN~G 309 (445)
|..|++ -.||++.|||+|+=| |.+ --|-..-+..+|.|||+||.=
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTC 176 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHAC 176 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECS
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEeccc
Confidence 777764 789999999999888 442 124456678899999999985
No 193
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=31.79 E-value=1.8e+02 Score=23.85 Aligned_cols=62 Identities=8% Similarity=-0.024 Sum_probs=38.4
Q ss_pred ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHh
Q 013345 62 HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALD 126 (445)
Q Consensus 62 Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~ 126 (445)
.+.+.+.-+++.|++.|-.+.++++++... +...+...|+..+--.+....+.+..+.+.+.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~ 97 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAP---LITRLKELGVEEIYTGSYKKLEIYEKIKEKYS 97 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHH---HHHHHHHTTCCEEEECC--CHHHHHHHHHHTT
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHH---HHHHHHHcCCHhhccCCCCCHHHHHHHHHHcC
Confidence 345667889999999999999999876433 44445556876543334444444443434443
No 194
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.42 E-value=1e+02 Score=28.26 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=53.7
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CC-CHHHHHHHHHHHHh
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GE-TLQEYWWCTEKALD 126 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~-t~eey~~~~~~~l~ 126 (445)
...|+|.+|.+.-=-.-==..+++.|.+.|++|.+++.+.-...+.++..+.+.|..+.... +. +.++....++++.+
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34578887654211111123577889999999999887554455566666666665544333 22 33444444444443
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.. +++++++-..|-
T Consensus 104 ~~--g~id~li~nAg~ 117 (271)
T 4iin_A 104 SD--GGLSYLVNNAGV 117 (271)
T ss_dssp HH--SSCCEEEECCCC
T ss_pred hc--CCCCEEEECCCc
Confidence 21 257888887774
No 195
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.26 E-value=1.1e+02 Score=29.04 Aligned_cols=50 Identities=16% Similarity=0.025 Sum_probs=35.1
Q ss_pred cEEEeee-----ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 55 AKITGSL-----HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 55 ~rI~~~l-----Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
.||.++. |+.+ ...|++.|.+.|.+|.+.+... ....+...|++++....
T Consensus 21 MrIl~~~~~~~Gh~~~-~~~la~~L~~~GheV~v~~~~~------~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 21 MRVLFASLGTHGHTYP-LLPLATAARAAGHEVTFATGEG------FAGTLRKLGFEPVATGM 75 (412)
T ss_dssp CEEEEECCSSHHHHGG-GHHHHHHHHHTTCEEEEEECGG------GHHHHHHTTCEEEECCC
T ss_pred eEEEEEcCCCcccHHH-HHHHHHHHHHCCCEEEEEccHH------HHHHHHhcCCceeecCc
Confidence 4665554 4443 4578999999999999876532 24556677999987753
No 196
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=31.24 E-value=57 Score=32.16 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=43.9
Q ss_pred CCCCCCCcEEEeeeccchhHHH---HHHHHHhCCCEEEEeecCCCC-----ChHHHHHHHHhCCCeEEEecCCCHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAV---LIETLTALGAEVRWCSCNIFS-----TQDHAAAAIARDSASVFAWKGETLQ 115 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~---li~tL~a~GAeV~~~~~np~S-----Tqd~vaaaL~~~Gi~V~A~~g~t~e 115 (445)
..++|+|+.|+. +=-++-|-. +--.-..+|+.|...+.+-.| |-.|+|.-|...|+.++..|.-..+
T Consensus 30 ~~~~L~gk~la~-lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~~D~iviR~~~~~ 104 (304)
T 3r7f_A 30 TDNQLTGKFAAN-LFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDE 104 (304)
T ss_dssp CCCTTTTCEEEE-EESSCCSHHHHHHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHHHTCCEEEEECSSTT
T ss_pred CCccCCCCEEEE-EecCCChhHHHhHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHHHHHhcCCEEEEecCChh
Confidence 356799998874 445555433 334556899998766443222 4578888888888777777765443
No 197
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=31.24 E-value=98 Score=30.76 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=53.3
Q ss_pred hHHHHHHHhCCCCCCCCcEEEee--ec-c-----ch-hHHHHHHHHHhCCCEEEEeecCCC----CChHHHHHHHHh-CC
Q 013345 38 GLMACRAEFGPSQPFKGAKITGS--LH-M-----TI-QTAVLIETLTALGAEVRWCSCNIF----STQDHAAAAIAR-DS 103 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~--lH-l-----t~-kTa~li~tL~a~GAeV~~~~~np~----STqd~vaaaL~~-~G 103 (445)
++.++|+....+ |+ |+||+.. .+ + +. ++..+++.|.+.|+.-.-.++-.+ ..+.+.++.+++ -+
T Consensus 217 iv~avr~~vg~~-~v-~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~ 294 (364)
T 1vyr_A 217 VVDAVCNEWSAD-RI-GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH 294 (364)
T ss_dssp HHHHHHHHSCGG-GE-EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCC-cE-EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC
Confidence 367788888766 54 7888765 22 1 22 466789999999998765554211 123456666654 48
Q ss_pred CeEEEecCCCHHHHHHHH
Q 013345 104 ASVFAWKGETLQEYWWCT 121 (445)
Q Consensus 104 i~V~A~~g~t~eey~~~~ 121 (445)
+||.+--|-|.++....+
T Consensus 295 iPvi~~Ggit~~~a~~~l 312 (364)
T 1vyr_A 295 GVIIGAGAYTAEKAEDLI 312 (364)
T ss_dssp SEEEEESSCCHHHHHHHH
T ss_pred CCEEEECCcCHHHHHHHH
Confidence 999998888776654433
No 198
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=31.06 E-value=93 Score=29.83 Aligned_cols=110 Identities=11% Similarity=-0.032 Sum_probs=72.4
Q ss_pred ccchhHHHHHHHHHhCCCEEEEeecCCCC-ChHHHHHHHHhCCCeE------EEecCCCHHHHHHHHHHHHhcCCCCCCc
Q 013345 62 HMTIQTAVLIETLTALGAEVRWCSCNIFS-TQDHAAAAIARDSASV------FAWKGETLQEYWWCTEKALDWGPGGGPD 134 (445)
Q Consensus 62 Hlt~kTa~li~tL~a~GAeV~~~~~np~S-Tqd~vaaaL~~~Gi~V------~A~~g~t~eey~~~~~~~l~~~~~~~p~ 134 (445)
.+-+.+.-++..|.+.|-.|.++++++-. +.+.+...|.+.|++. +-..+. .|-....+.|... +.+
T Consensus 101 ~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~---~~K~~~r~~L~~~---gy~ 174 (260)
T 3pct_A 101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK---SNKSVRFKQVEDM---GYD 174 (260)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC---SSSHHHHHHHHTT---TCE
T ss_pred CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC---CChHHHHHHHHhc---CCC
Confidence 44567788999999999999999999877 7888999999999984 322222 2233334444421 467
Q ss_pred EEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchh
Q 013345 135 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193 (445)
Q Consensus 135 lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 193 (445)
+++=.|-++.-+.. ..+...+++.+++...+...+.+.=.-.|
T Consensus 175 iv~~iGD~~~Dl~~----------------~~~~~~~~~r~a~v~~~~~~fG~~~ivlP 217 (260)
T 3pct_A 175 IVLFVGDNLNDFGD----------------ATYKKSNAERRDFVAKNSKAFGKKFIVLP 217 (260)
T ss_dssp EEEEEESSGGGGCG----------------GGTTCCHHHHHHHHHHTGGGBTTTEEECC
T ss_pred EEEEECCChHHcCc----------------ccccCCHHHHHHHHHHHHHHhCCCEEEeC
Confidence 77766665543332 12334567788888888777765444334
No 199
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=30.99 E-value=74 Score=28.86 Aligned_cols=50 Identities=8% Similarity=0.069 Sum_probs=38.8
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~ 123 (445)
+|.+.++..++.+++. +.++++...|.+.||||+.....+.+++.+.+..
T Consensus 53 ~E~i~~l~PDLIi~~~---~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~ 102 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVS---TIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQ 102 (260)
T ss_dssp HHHHHHTCCSEEEEEG---GGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEecC---ccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHH
Confidence 6889999999998764 2456788889888999888776677777666644
No 200
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=30.97 E-value=2.2e+02 Score=26.98 Aligned_cols=95 Identities=13% Similarity=0.005 Sum_probs=50.8
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETLQ 115 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~e 115 (445)
+.+.+...-+...+.-+|.+|.+.-=-..==...++.+++.||+|..+..++- +-+ .+.+.|.. ++-.+..+
T Consensus 128 ~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~---~~~~lga~~~~~~~~~~-- 200 (340)
T 3gms_A 128 NPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK--HTE---ELLRLGAAYVIDTSTAP-- 200 (340)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST--THH---HHHHHTCSEEEETTTSC--
T ss_pred hHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH--HHH---HHHhCCCcEEEeCCccc--
Confidence 34444444444455557888865421111122344666788999998887662 112 22334655 44444333
Q ss_pred HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 116 EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 116 ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
+...+.+. .++.+.++++|.-|.
T Consensus 201 -~~~~~~~~---~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 201 -LYETVMEL---TNGIGADAAIDSIGG 223 (340)
T ss_dssp -HHHHHHHH---TTTSCEEEEEESSCH
T ss_pred -HHHHHHHH---hCCCCCcEEEECCCC
Confidence 33333332 223478999998764
No 201
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=30.92 E-value=1.2e+02 Score=27.38 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=38.9
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~eey~~~~~~ 123 (445)
+|.+.++..++.+++.. ...++....|.+.|+||+... ..+.+++...+..
T Consensus 52 ~E~i~~l~PDlIi~~~~--~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~ 103 (255)
T 3md9_A 52 AEGILAMKPTMLLVSEL--AQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINA 103 (255)
T ss_dssp HHHHHTTCCSEEEEETT--CSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHH
T ss_pred HHHHHccCCCEEEEcCC--cCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHH
Confidence 69999999999998653 223567888999999999886 3677777666644
No 202
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.79 E-value=1.3e+02 Score=27.57 Aligned_cols=68 Identities=12% Similarity=0.095 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCC--EEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 68 AVLIETLTALGA--EVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 68 a~li~tL~a~GA--eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
..+++.|.+.+- +|...-|||-.. .+.....+.|||++.+.- .+.++|...+.+.|.. .+|++|+=-|
T Consensus 16 ~~~l~~l~~~~~~~~i~~Vvs~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~---~~~Dliv~a~ 88 (216)
T 2ywr_A 16 QAIIDAIESGKVNASIELVISDNPKA--YAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKK---KGVELVVLAG 88 (216)
T ss_dssp HHHHHHHHTTSSCEEEEEEEESCTTC--HHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHH---TTCCEEEESS
T ss_pred HHHHHHHHhCCCCCeEEEEEeCCCCh--HHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh---cCCCEEEEeC
Confidence 456677777664 887777776322 233333556999996432 3566777666666653 2588887544
No 203
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=30.69 E-value=49 Score=32.70 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=38.0
Q ss_pred cHHHhhccCCEEEecC----CC------------CCCCCHHHHhcCcCCcEEeCCCC--Cccccccc
Q 013345 270 TLEDVLSDADIFVTTT----GN------------KDIIMVDHMKKMKNNAIVCNIGH--FDNEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTaT----Gn------------~~vI~~eh~~~MKdgAILaN~Gh--fd~EId~~ 318 (445)
.+++|++.+|+++|-+ |. .=.|+.+-|+.+|+++|+.-.+= -.+||+-+
T Consensus 209 d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 275 (309)
T 4f2g_A 209 DPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTAG 275 (309)
T ss_dssp SHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCHH
T ss_pred CHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecHH
Confidence 6899999999999965 32 12489999999999999987776 55788743
No 204
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=30.48 E-value=1e+02 Score=27.97 Aligned_cols=67 Identities=16% Similarity=0.074 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.+++-|+- ..+.+++ +...|..++...-++.++....+.+.+ +++++++-..|-
T Consensus 16 ~ia~~l~~~G~~V~~~~r~~~-~~~~~~~-l~~~~~~~~~~d~~~v~~~~~~~~~~~-----g~iD~lv~nAg~ 82 (254)
T 1zmt_A 16 GSALRLSEAGHTVACHDESFK-QKDELEA-FAETYPQLKPMSEQEPAELIEAVTSAY-----GQVDVLVSNDIF 82 (254)
T ss_dssp HHHHHHHHTTCEEEECCGGGG-SHHHHHH-HHHHCTTSEECCCCSHHHHHHHHHHHH-----SCCCEEEEECCC
T ss_pred HHHHHHHHCCCEEEEEeCCHH-HHHHHHH-HHhcCCcEEEECHHHHHHHHHHHHHHh-----CCCCEEEECCCc
Confidence 467888999999999887653 2334444 655565555443334444443333322 257888887763
No 205
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=30.24 E-value=42 Score=30.83 Aligned_cols=34 Identities=6% Similarity=-0.080 Sum_probs=23.5
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEE
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRW 83 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~ 83 (445)
+.+||.|.||.+.=.- +..-+.+.|.+.|++|..
T Consensus 2 e~~~l~g~~vlvtr~~--~~~~l~~~L~~~G~~~~~ 35 (261)
T 1wcw_A 2 RRLEEDAVRVAYAGLR--RKEAFKALAEKLGFTPLL 35 (261)
T ss_dssp ------CCEEEECCST--THHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHCCCcEEE
Confidence 4589999999987644 378899999999999865
No 206
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=30.02 E-value=2e+02 Score=24.47 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=47.0
Q ss_pred cchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCc-c
Q 013345 63 MTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDG-G 141 (445)
Q Consensus 63 lt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDG-g 141 (445)
+.+++.-+++.|++.|-.+.++++++......++ .+.|+.-+-..+.+..+.+..+.+-+...+ .-.+.+.|+ .
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~---~~lgl~~~~~~~k~k~~~~~~~~~~~~~~~--~~~~~vGD~~~ 110 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRI---ADLGIKLFFLGKLEKETACFDLMKQAGVTA--EQTAYIGDDSV 110 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHH---HHHTCCEEEESCSCHHHHHHHHHHHHTCCG--GGEEEEECSGG
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHH---HHcCCceeecCCCCcHHHHHHHHHHcCCCH--HHEEEECCCHH
Confidence 4567778999999999999999987765444433 444776443334555555555544444321 123455554 4
Q ss_pred hhhHH
Q 013345 142 DATLL 146 (445)
Q Consensus 142 dl~~~ 146 (445)
|+...
T Consensus 111 Di~~~ 115 (180)
T 1k1e_A 111 DLPAF 115 (180)
T ss_dssp GHHHH
T ss_pred HHHHH
Confidence 55443
No 207
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=29.95 E-value=1.3e+02 Score=27.22 Aligned_cols=51 Identities=10% Similarity=0.037 Sum_probs=38.7
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-C-CHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-E-TLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~-t~eey~~~~~~ 123 (445)
+|.+.++..++.+++. .+...+....|.+.||||+.... . +.+++...+..
T Consensus 52 ~E~i~~l~PDLIi~~~--~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~ 104 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQ--DAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQ 104 (256)
T ss_dssp HHHHHTTCCSEEEEET--TCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHH
T ss_pred HHHHHccCCCEEEEcC--CCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHH
Confidence 6999999999998764 23456788899999999988753 3 67777666644
No 208
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=29.95 E-value=1.4e+02 Score=27.55 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=51.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~ 128 (445)
.|+|.++.+.-=-.-==..+++.|.+.||+|.+++-|+ +.-+++++.+.+.|..+.... +.+ .++....++++.+.-
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP-SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH-HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 57888765422111112357788999999999987654 233455666666666655444 333 333334444444332
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+++++++-..|-
T Consensus 102 --g~iD~lv~nAg~ 113 (271)
T 4ibo_A 102 --IDVDILVNNAGI 113 (271)
T ss_dssp --CCCCEEEECCCC
T ss_pred --CCCCEEEECCCC
Confidence 358888888773
No 209
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=29.81 E-value=2.3e+02 Score=26.00 Aligned_cols=87 Identities=16% Similarity=0.016 Sum_probs=49.4
Q ss_pred CCCCcEEEeeeccch--hHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHh
Q 013345 51 PFKGAKITGSLHMTI--QTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD--SASVFAWKGETLQEYWWCTEKALD 126 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~--kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~--Gi~V~A~~g~t~eey~~~~~~~l~ 126 (445)
.|+|.++.+.-=-.. ==..+++.|.+.|++|.+++.++ ..+.+..+.+. .+.++..-=.+.++....++++.+
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ---FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT---CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch---HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 356776554321100 11346788999999999998876 44566666544 344443322233444444445444
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.- ++++++|-..|-
T Consensus 100 ~~--g~id~li~nAg~ 113 (280)
T 3nrc_A 100 VW--DGLDAIVHSIAF 113 (280)
T ss_dssp HC--SSCCEEEECCCC
T ss_pred Hc--CCCCEEEECCcc
Confidence 32 358888887773
No 210
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=29.56 E-value=35 Score=32.13 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=29.9
Q ss_pred ecHHHhhccCCEEEecCCCC----CCCCHHHHhcCcCCcEEe-CCCCC
Q 013345 269 LTLEDVLSDADIFVTTTGNK----DIIMVDHMKKMKNNAIVC-NIGHF 311 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~----~vI~~eh~~~MKdgAILa-N~Ghf 311 (445)
..++++++.+|++|.|.... ..+-.+-.+.++.++|++ |....
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~ 124 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL 124 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 35678899999999999874 112223345579999999 55543
No 211
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=29.53 E-value=80 Score=28.34 Aligned_cols=44 Identities=11% Similarity=0.056 Sum_probs=38.9
Q ss_pred ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe
Q 013345 62 HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS 105 (445)
Q Consensus 62 Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~ 105 (445)
++.++|.-.++.|++.|-.|++++.|+.-+...++..|...|+.
T Consensus 24 ~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 24 TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 45678888999999999999999999988889999999888886
No 212
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=29.43 E-value=1.6e+02 Score=26.75 Aligned_cols=89 Identities=9% Similarity=0.048 Sum_probs=52.0
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~ 127 (445)
..|+|.++.+.-----==..+++.|.+.|++|.+++-|+ ..-+++++.+.+.|..+.... +.+ .++....++++.+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTV-ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357777764332211112456788999999999988655 233455666666666655443 333 33444444555443
Q ss_pred CCCCCCcEEecCcc
Q 013345 128 GPGGGPDLIVDDGG 141 (445)
Q Consensus 128 ~~~~~p~lilDDGg 141 (445)
- +++++++-..|
T Consensus 86 ~--g~id~lv~nAg 97 (264)
T 3ucx_A 86 Y--GRVDVVINNAF 97 (264)
T ss_dssp T--SCCSEEEECCC
T ss_pred c--CCCcEEEECCC
Confidence 2 35888887765
No 213
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=29.37 E-value=1.3e+02 Score=27.11 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=48.2
Q ss_pred CCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCC
Q 013345 52 FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGP 129 (445)
Q Consensus 52 l~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~ 129 (445)
|+|.++.+.---.-==..+++.|.+.|++|.+++-|+ ...+++++.+...|..+..+. +.+ .++....++++.+.-
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRV-EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL- 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5565544322111122356788999999999988765 223445556655565544433 333 334444444444321
Q ss_pred CCCCcEEecCcc
Q 013345 130 GGGPDLIVDDGG 141 (445)
Q Consensus 130 ~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 83 -g~id~lv~nAg 93 (247)
T 2jah_A 83 -GGLDILVNNAG 93 (247)
T ss_dssp -SCCSEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 35788888776
No 214
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=29.26 E-value=1.8e+02 Score=27.03 Aligned_cols=81 Identities=16% Similarity=0.134 Sum_probs=47.0
Q ss_pred cEEEeee-ccchhHHHHHHHHHh-CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcCC
Q 013345 55 AKITGSL-HMTIQTAVLIETLTA-LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 55 ~rI~~~l-Hlt~kTa~li~tL~a-~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~~ 129 (445)
.||++.. ---..-..|++...+ .+++|...-||+-... +...-.+.||||+.+.- .+.++|...+.+.|..
T Consensus 6 ~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~--~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~-- 81 (215)
T 3tqr_A 6 LPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAY--GLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDH-- 81 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCH--HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHT--
T ss_pred cEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchH--HHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHh--
Confidence 3565432 222333445666555 4789988777753221 12223457999987532 4567777666666653
Q ss_pred CCCCcEEecCc
Q 013345 130 GGGPDLIVDDG 140 (445)
Q Consensus 130 ~~~p~lilDDG 140 (445)
.+|++|+=-|
T Consensus 82 -~~~Dliv~ag 91 (215)
T 3tqr_A 82 -YDPKLIVLAG 91 (215)
T ss_dssp -TCCSEEEESS
T ss_pred -cCCCEEEEcc
Confidence 2588887655
No 215
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=29.04 E-value=2.1e+02 Score=26.36 Aligned_cols=88 Identities=16% Similarity=0.034 Sum_probs=52.5
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t-~eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.-=-.-==..+++.|.+.||+|.+++.|+-. -+++++.+...|..+..... .+ .++....++++.+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGS-TAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTT-THHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4778776542211111235778899999999999887743 34566667666655544432 22 23333444444444
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+++++++-+.|-
T Consensus 108 --g~iD~lvnnAg~ 119 (275)
T 4imr_A 108 --APVDILVINASA 119 (275)
T ss_dssp --SCCCEEEECCCC
T ss_pred --CCCCEEEECCCC
Confidence 368888887773
No 216
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=29.03 E-value=2.1e+02 Score=25.28 Aligned_cols=88 Identities=13% Similarity=0.058 Sum_probs=44.4
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
.|+|.+|.+.-=-.-==..+++.|.+.|++|++++.|+- .-++.+..+.. ..+.++..-=.+.++....++++.+.-
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD-VGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 356665543221111124578889999999999886541 11223333321 245554432223334444444443221
Q ss_pred CCCCcEEecCcc
Q 013345 130 GGGPDLIVDDGG 141 (445)
Q Consensus 130 ~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 81 -~~id~li~~Ag 91 (251)
T 1zk4_A 81 -GPVSTLVNNAG 91 (251)
T ss_dssp -SSCCEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 24788887766
No 217
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.99 E-value=2.2e+02 Score=24.98 Aligned_cols=68 Identities=9% Similarity=-0.006 Sum_probs=44.3
Q ss_pred hChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh-HHHHHHHHhCCCeEEE
Q 013345 35 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ-DHAAAAIARDSASVFA 108 (445)
Q Consensus 35 ~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq-d~vaaaL~~~Gi~V~A 108 (445)
-++.+.++|+.+. ..|+ ..-+.+..-...+++.+.+.||+.....+-+...+ .++..++.+.|+.+..
T Consensus 40 g~~~i~~ir~~~~-~~~i-----~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 40 GVNAIKAIKEKYP-HKEV-----LADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp TTHHHHHHHHHCT-TSEE-----EEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHhCC-CCEE-----EEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 4667888888762 3444 33343333334568999999999988877654222 5566677777998764
No 218
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=28.96 E-value=92 Score=30.66 Aligned_cols=50 Identities=28% Similarity=0.350 Sum_probs=36.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccch-hH-HHHHHHHHhCCCEEEEeecCCCCC
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTI-QT-AVLIETLTALGAEVRWCSCNIFST 91 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~-kT-a~li~tL~a~GAeV~~~~~np~ST 91 (445)
|..|+++|. .|+|.+|+.+--..- .+ -=++..|...|++|+++++.-|..
T Consensus 135 l~Ti~e~~g---~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~ 186 (304)
T 3r7f_A 135 LMTIYEEFN---TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQD 186 (304)
T ss_dssp HHHHHHHHS---CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSC
T ss_pred HHHHHHHhC---CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCc
Confidence 456788875 589999999887642 23 347788888999999988654443
No 219
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=28.74 E-value=56 Score=25.05 Aligned_cols=36 Identities=19% Similarity=0.055 Sum_probs=28.5
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEE
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRW 83 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~ 83 (445)
..++|+|.+|.++-...+....|.+.+.+.|+.+..
T Consensus 4 ~~~~f~g~~~~i~g~~~~~~~~l~~~i~~~GG~~~~ 39 (92)
T 4id3_A 4 SSKIFKNCVIYINGYTKPGRLQLHEMIVLHGGKFLH 39 (92)
T ss_dssp --CTTTTCEEEECSCCSSCHHHHHHHHHHTTCEEES
T ss_pred cccccCCEEEEEeCCCCcCHHHHHHHHHHCCCEEEE
Confidence 467899999998876666677788889999999874
No 220
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=28.62 E-value=1.4e+02 Score=27.59 Aligned_cols=71 Identities=18% Similarity=0.150 Sum_probs=44.2
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.+++-|+ ..-+.+++.+...|..+.... +.+. ++....++++.+.- +++++++-..|-
T Consensus 19 aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~iD~lVnnAG~ 91 (264)
T 3tfo_A 19 GIARELGVAGAKILLGARRQ-ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW--GRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 46788999999999988654 233456666666676665544 3343 33334444444321 358888888773
No 221
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=28.59 E-value=2.1e+02 Score=25.16 Aligned_cols=72 Identities=18% Similarity=0.164 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCCEEEEee-cCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCS-CNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~-~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|++++ .++ ...++..+.+...|..+.... +.+. ++....++++.+.- +++++++-..|-
T Consensus 19 ~~~a~~l~~~G~~V~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 19 KAIAWKLGNMGANIVLNGSPAS-TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF--GRIDILVNNAGI 93 (247)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC-SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH--SCCCEEEECC--
T ss_pred HHHHHHHHHCCCEEEEEcCcCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc--CCCCEEEECCCC
Confidence 357788899999999874 333 333555666665565443333 3333 33333344443321 258888888774
No 222
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=28.45 E-value=1.1e+02 Score=28.21 Aligned_cols=80 Identities=18% Similarity=0.060 Sum_probs=46.0
Q ss_pred EEEeeeccc-hhHHHHHHHHHhC--CCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC---CCHHHHHHHHHHHHhcCC
Q 013345 56 KITGSLHMT-IQTAVLIETLTAL--GAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG---ETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 56 rI~~~lHlt-~kTa~li~tL~a~--GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g---~t~eey~~~~~~~l~~~~ 129 (445)
||++..-=+ ..-..+++.+.+. .++|...-||+-... ......+.|||++.+.- .+.++|...+.+.|..
T Consensus 9 ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~--~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~-- 84 (209)
T 4ds3_A 9 RVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAG--GLAKAEAAGIATQVFKRKDFASKEAHEDAILAALDV-- 84 (209)
T ss_dssp EEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCT--HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH--
T ss_pred cEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccH--HHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHh--
Confidence 565433222 2234566666654 379987777642221 22233457999997642 4577777666666643
Q ss_pred CCCCcEEecCc
Q 013345 130 GGGPDLIVDDG 140 (445)
Q Consensus 130 ~~~p~lilDDG 140 (445)
.+|++|+=-|
T Consensus 85 -~~~Dliv~ag 94 (209)
T 4ds3_A 85 -LKPDIICLAG 94 (209)
T ss_dssp -HCCSEEEESS
T ss_pred -cCCCEEEEec
Confidence 2588887655
No 223
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=28.40 E-value=49 Score=33.15 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=29.4
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS 85 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~ 85 (445)
..||+|+||.-..++-+- .+-...|.++||||.-.=
T Consensus 4 ~~pL~GirVldls~~~aG-P~a~~~LAdlGAeVIKVE 39 (359)
T 2g04_A 4 GGPLAGVKVIELGGIGPG-PHAGMVLADLGADVVRVR 39 (359)
T ss_dssp CCTTTTCEEEECCCSTHH-HHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEEcCCcchH-HHHHHHHHHcCCcEEEEc
Confidence 469999999998888764 456688999999998654
No 224
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.32 E-value=74 Score=27.41 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=39.0
Q ss_pred CCCCCCcEEEeeeccchh--HHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 49 SQPFKGAKITGSLHMTIQ--TAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~k--Ta~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
.-|-+| +-+++|=.-| -.-+++.|.++|-++..|+. .+..|.+.||+|....
T Consensus 21 ~lP~~g--vliSv~d~dK~~l~~~a~~l~~lGf~i~AT~G--------Ta~~L~~~Gi~v~~v~ 74 (143)
T 2yvq_A 21 KIPQKG--ILIGIQQSFRPRFLGVAEQLHNEGFKLFATEA--------TSDWLNANNVPATPVA 74 (143)
T ss_dssp CCCCSE--EEEECCGGGHHHHHHHHHHHHTTTCEEEEEHH--------HHHHHHHTTCCCEEEC
T ss_pred CCCCCC--EEEEecccchHHHHHHHHHHHHCCCEEEECch--------HHHHHHHcCCeEEEEE
Confidence 456678 7777776444 44578999999999887653 6788888999987654
No 225
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=28.27 E-value=1e+02 Score=31.06 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=27.5
Q ss_pred CCCCCCcEEEeeeccc----hhHHHHHHHHHhCCCEEE
Q 013345 49 SQPFKGAKITGSLHMT----IQTAVLIETLTALGAEVR 82 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt----~kTa~li~tL~a~GAeV~ 82 (445)
.+||+|++|..+--+. ++...+.+...++||.|.
T Consensus 280 ~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~v~ 317 (372)
T 3ef0_A 280 QKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVV 317 (372)
T ss_dssp TTTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCEEE
T ss_pred hhhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCEEe
Confidence 3899999999987663 334688889999999985
No 226
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=28.21 E-value=53 Score=32.87 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=28.9
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS 85 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~ 85 (445)
.||+|+||.-..++-+- .+-...|.++||||.-.=
T Consensus 3 ~pL~GirVldls~~~aG-P~a~~~LAdlGAeVIKVE 37 (360)
T 2yim_A 3 GPLSGLRVVELAGIGPG-PHAAMILGDLGADVVRID 37 (360)
T ss_dssp CTTTTCEEEEECCSTHH-HHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEeCCcchH-HHHHHHHHHcCCcEEEEe
Confidence 69999999999887764 456688999999998664
No 227
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=28.13 E-value=3.5e+02 Score=26.43 Aligned_cols=101 Identities=15% Similarity=0.019 Sum_probs=56.6
Q ss_pred HHHhhChhHHHHHHHhCCC-CCCCCcEEEeeeccchhHHHHHHHHHhCCC-EEEEeecCCCCChHHHHHHHHhCCCe-EE
Q 013345 31 LAEVEMPGLMACRAEFGPS-QPFKGAKITGSLHMTIQTAVLIETLTALGA-EVRWCSCNIFSTQDHAAAAIARDSAS-VF 107 (445)
Q Consensus 31 wa~~~MP~L~~l~~~~~~~-kPl~G~rI~~~lHlt~kTa~li~tL~a~GA-eV~~~~~np~STqd~vaaaL~~~Gi~-V~ 107 (445)
.|---+|++.+...-+... +.-.|.+|.+.-- -.==...+..+++.|| +|..+.+++ +-.+.+.+.|.. |+
T Consensus 190 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~~~~lGa~~vi 263 (404)
T 3ip1_A 190 AGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSE-----VRRNLAKELGADHVI 263 (404)
T ss_dssp HHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCH-----HHHHHHHHHTCSEEE
T ss_pred HHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHcCCCEEE
Confidence 3444456666666655333 5567989877532 2222334566678999 888876543 222333445765 55
Q ss_pred EecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchh
Q 013345 108 AWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDA 143 (445)
Q Consensus 108 A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl 143 (445)
..+.++ +...+.+. -++.++++++|.-|.-
T Consensus 264 ~~~~~~---~~~~i~~~---t~g~g~D~vid~~g~~ 293 (404)
T 3ip1_A 264 DPTKEN---FVEAVLDY---TNGLGAKLFLEATGVP 293 (404)
T ss_dssp CTTTSC---HHHHHHHH---TTTCCCSEEEECSSCH
T ss_pred cCCCCC---HHHHHHHH---hCCCCCCEEEECCCCc
Confidence 444433 33333333 2234799999986643
No 228
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=28.06 E-value=52 Score=34.13 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=28.4
Q ss_pred HHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee
Q 013345 44 AEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS 85 (445)
Q Consensus 44 ~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~ 85 (445)
..-...+||+|+||.-..++-+- .+-...|.++||||.-.=
T Consensus 23 ~~~~~~~PL~GirVlDls~~~aG-P~a~~lLADlGAdVIKVE 63 (456)
T 3ubm_A 23 TTSENSKPLDGIKVIDFGGVQSV-PSAAQLLAWYGADVIKIE 63 (456)
T ss_dssp ------CTTTTCEEEEECCSSHH-HHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCCCCCCEEEEcCCccHH-HHHHHHHHHhCCeEEEEC
Confidence 33356789999999988887653 455678999999998654
No 229
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=28.03 E-value=1.7e+02 Score=27.01 Aligned_cols=90 Identities=16% Similarity=0.053 Sum_probs=53.5
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~ 127 (445)
..|+|.++.+.-=-.-==..+++.|.+.||+|.+++-|+ +.-+++++.+...|..+...+ +.+. ++....++++.+.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS-DALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG-GGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357888865433222222357788999999999998776 334566777766654444333 3333 3333444444432
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 107 ~--g~iD~lvnnAg~ 119 (276)
T 3r1i_A 107 L--GGIDIAVCNAGI 119 (276)
T ss_dssp H--SCCSEEEECCCC
T ss_pred c--CCCCEEEECCCC
Confidence 1 358888887774
No 230
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=27.94 E-value=1.7e+02 Score=27.40 Aligned_cols=69 Identities=12% Similarity=-0.036 Sum_probs=44.7
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
..++.|.+.||.|.+++-|.- ....++++.+.|..+.+.+ +.+ .++....++++.+.- ++.|+++-+-|
T Consensus 22 aia~~la~~Ga~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~--G~iDiLVNnAG 92 (258)
T 4gkb_A 22 AISMRLAEERAIPVVFARHAP--DGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF--GRLDGLVNNAG 92 (258)
T ss_dssp HHHHHHHHTTCEEEEEESSCC--CHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHHcCCEEEEEECCcc--cHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh--CCCCEEEECCC
Confidence 356889999999999987652 2445666666665554443 333 344455556666432 36899998887
No 231
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=27.88 E-value=67 Score=31.96 Aligned_cols=49 Identities=20% Similarity=0.083 Sum_probs=37.9
Q ss_pred cHHHhhccCCEEEecC----CCC------------CCCCHHHHhcCcCCcEEeCCCC--Cccccccc
Q 013345 270 TLEDVLSDADIFVTTT----GNK------------DIIMVDHMKKMKNNAIVCNIGH--FDNEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTaT----Gn~------------~vI~~eh~~~MKdgAILaN~Gh--fd~EId~~ 318 (445)
.+++|++.+|+++|-+ |.. =.|+.+-|+.+|+++|+.-.+= -.+||+-+
T Consensus 218 d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 218 DPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp CHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred CHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 5899999999999865 321 2589999999999999987765 55788744
No 232
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=27.62 E-value=1e+02 Score=29.40 Aligned_cols=52 Identities=8% Similarity=-0.041 Sum_probs=39.0
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChH-HHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD-HAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd-~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-..+..-+++ . -.|.-.-+||+..+. ++..++.+.||.|+||.
T Consensus 184 ir~iGvSn~~~~~l~~~~~---~--~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 184 IGAYGLSGKTVEGGLRALR---E--GDCAMVTYNLNERAERPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp EEEEEEECSSHHHHHHHHH---H--SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEeCCCCHHHHHHHHH---h--hcEEeeccccccCCHHHHHHHHHHCCcEEEEec
Confidence 3578888885444333332 2 667777889999986 99999999999999995
No 233
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=27.49 E-value=19 Score=31.50 Aligned_cols=74 Identities=14% Similarity=-0.032 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 64 TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 64 t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
.+.+.-.++.|++.|-.|.++++.+..+-..+...|.+.|++....-.-.+++..+ ...... + -.+++.|||=.
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P~~~~~-~~~~~r-K--~~~~~fIDDR~ 99 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYPEEERD-HQGFSR-K--LKADLFIDDRN 99 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSSTTC----CCSCCS-S--CCCSEEECTTS
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCCchhhhc-chhhcC-C--cCCCEEeeccc
Confidence 45778888999999999999988876666778888888888764443222332111 000011 1 24789999854
No 234
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=27.45 E-value=2.5e+02 Score=26.48 Aligned_cols=91 Identities=15% Similarity=0.035 Sum_probs=53.1
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCC---------CCChHHHHHHHHhCCCeEEEecC-CCH-HHHHH
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNI---------FSTQDHAAAAIARDSASVFAWKG-ETL-QEYWW 119 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np---------~STqd~vaaaL~~~Gi~V~A~~g-~t~-eey~~ 119 (445)
.|+|.++.+.-=-.-==..+++.|.+.||+|.++.-|. -...+.+++.+...|..+..... .+. ++-..
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 47887765422111112357788999999999987652 23345666677777777665543 332 33333
Q ss_pred HHHHHHhcCCCCCCcEEecCcchh
Q 013345 120 CTEKALDWGPGGGPDLIVDDGGDA 143 (445)
Q Consensus 120 ~~~~~l~~~~~~~p~lilDDGgdl 143 (445)
.++++.+.- ++++++|-..|-.
T Consensus 104 ~~~~~~~~~--g~iD~lv~nAg~~ 125 (322)
T 3qlj_A 104 LIQTAVETF--GGLDVLVNNAGIV 125 (322)
T ss_dssp HHHHHHHHH--SCCCEEECCCCCC
T ss_pred HHHHHHHHc--CCCCEEEECCCCC
Confidence 344444321 3588888887743
No 235
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.44 E-value=2.5e+02 Score=25.99 Aligned_cols=68 Identities=18% Similarity=0.123 Sum_probs=41.2
Q ss_pred HHHHHHHHh--CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec---CCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 68 AVLIETLTA--LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK---GETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 68 a~li~tL~a--~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~---g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
..|++...+ +.++|...-||.-.. .+.....+.||||+.+. -.+.++|...+.+.|.. .+|++|+=-|
T Consensus 17 ~ali~~~~~~~l~~eI~~Visn~~~a--~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~---~~~Dliv~ag 89 (211)
T 3p9x_A 17 EAIIQSQKAGQLPCEVALLITDKPGA--KVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKE---KQIDFVVLAG 89 (211)
T ss_dssp HHHHHHHHTTCCSSEEEEEEESCSSS--HHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHH---TTCCEEEESS
T ss_pred HHHHHHHHcCCCCcEEEEEEECCCCc--HHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHh---cCCCEEEEeC
Confidence 344444433 347898777774222 34444456799998653 23567777777666653 2588887655
No 236
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=27.33 E-value=1.7e+02 Score=27.50 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=52.2
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCC-CeEEEec-CCCH-HHHHHHHHHHHh
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS-ASVFAWK-GETL-QEYWWCTEKALD 126 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~G-i~V~A~~-g~t~-eey~~~~~~~l~ 126 (445)
..|+|.++.+.-=-.-==..+++.|.+.||+|.+++-|+ ...+++++.|.+.| -.+.... +.+. ++....++++.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP-RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG-GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 457888765432111112357788999999999998776 33456677776655 3333332 3443 333344444443
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.- +++++++-..|-
T Consensus 116 ~~--g~iD~lvnnAg~ 129 (293)
T 3rih_A 116 AF--GALDVVCANAGI 129 (293)
T ss_dssp HH--SCCCEEEECCCC
T ss_pred Hc--CCCCEEEECCCC
Confidence 21 357888887773
No 237
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=27.27 E-value=85 Score=33.89 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=69.1
Q ss_pred EEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcE
Q 013345 56 KITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDL 135 (445)
Q Consensus 56 rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~l 135 (445)
|+-+++.--..-.-+++.|.++|-++..|+. .|.+|.+.||+|-.- .+ +-. -|.+
T Consensus 7 ~aLISV~DK~~iv~lAk~L~~lGf~I~ATgG--------TAk~L~e~GI~v~~V-----~k-------~Tg-----fPE~ 61 (593)
T 1g8m_A 7 LALLSVSEKAGLVEFARSLNALGLGLIASGG--------TATALRDAGLPVRDV-----SD-------LTG-----FPEM 61 (593)
T ss_dssp EEEEEESCCTTHHHHHHHHHHTTCEEEECHH--------HHHHHHHTTCCCEEH-----HH-------HHS-----CCCB
T ss_pred EEEEEEeCcHhHHHHHHHHHHCCCEEEEchH--------HHHHHHHCCCeEEEe-----ec-------ccC-----Cchh
Confidence 4445554456667889999999999988775 889999999999632 22 222 2554
Q ss_pred EecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHH
Q 013345 136 IVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQ 215 (445)
Q Consensus 136 ilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~ 215 (445)
+ ||-. . +-+|.+-.+|++ - .. -....+
T Consensus 62 l---~GRV-K--------------------------------------------TLHP~ihgGiLa-r-~~---~~h~~~ 88 (593)
T 1g8m_A 62 L---GGRV-K--------------------------------------------TLHPAVHAGILA-R-NI---PEDNAD 88 (593)
T ss_dssp G---GGTB-S--------------------------------------------SCSHHHHHHHHC-C-SS---HHHHHH
T ss_pred h---cCCc-c--------------------------------------------ccCchhhhhhcc-C-CC---HHHHHH
Confidence 3 2322 2 334555555665 1 11 224688
Q ss_pred HHHcCCccccEEEeeccccccc
Q 013345 216 MQENGTLLFPAINVNDSVTKSK 237 (445)
Q Consensus 216 m~~~g~L~~Pvi~VNdS~tK~~ 237 (445)
|.+.|.-++=++.||-=+.+..
T Consensus 89 l~~~~I~~iDlVvvNLYPF~~t 110 (593)
T 1g8m_A 89 MNKQDFSLVRVVVCNLYPFVKT 110 (593)
T ss_dssp HHHTTCCCEEEEEEECCCHHHH
T ss_pred HHHcCCCceeEEEEeccCHHHh
Confidence 9999999999999998665543
No 238
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.06 E-value=1.4e+02 Score=27.51 Aligned_cols=72 Identities=19% Similarity=0.194 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|.+++-|+ +.-+.+++.+.+.|..+.... +.+ .++....++++.+.- +++++++-.-|-
T Consensus 38 ~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~id~lv~nAg~ 111 (279)
T 3sju_A 38 LAVARTLAARGIAVYGCARDA-KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF--GPIGILVNSAGR 111 (279)
T ss_dssp HHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH--CSCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc--CCCcEEEECCCC
Confidence 356788999999999988654 223445666666665554443 333 334444445544321 357888887763
No 239
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.85 E-value=1.9e+02 Score=26.68 Aligned_cols=89 Identities=16% Similarity=-0.013 Sum_probs=53.1
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHHHHHHHHHHHHhcC
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQEYWWCTEKALDWG 128 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~eey~~~~~~~l~~~ 128 (445)
..|+|.++.+.-=-.-==..+++.|.+.||+|.+++. . ...+++++.+.+.|..+.... +.+..+-...+.+.+...
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-T-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-S-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-H-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 4688888754322111123578889999999999873 2 334566777776666654443 444444344444444321
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+++++++-.-|-
T Consensus 105 --g~iD~lv~nAg~ 116 (273)
T 3uf0_A 105 --RRVDVLVNNAGI 116 (273)
T ss_dssp --SCCCEEEECCCC
T ss_pred --CCCcEEEECCCC
Confidence 368888887763
No 240
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=26.83 E-value=82 Score=33.21 Aligned_cols=76 Identities=18% Similarity=0.040 Sum_probs=45.3
Q ss_pred EEEeeeccchhH-HHHHHHHHhCCCEEEEeecCCCCCh-----HHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 56 KITGSLHMTIQT-AVLIETLTALGAEVRWCSCNIFSTQ-----DHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 56 rI~~~lHlt~kT-a~li~tL~a~GAeV~~~~~np~STq-----d~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
||.... +++- ..-++.|.+.|++|...-|||-.-. ..+.....+.||||+.......++....+. ++
T Consensus 2 ri~~~~--s~~~~~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~l~---~~-- 74 (660)
T 1z7e_A 2 KTVVFA--YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIA---QL-- 74 (660)
T ss_dssp EEEEEE--CHHHHHHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHHTCCEECCSCTTSHHHHHHHH---HH--
T ss_pred EEEEEE--eCHHHHHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCCCCcHHHHHHHH---hc--
Confidence 555444 5552 2235778888999988888773211 224544456799999876655555444333 23
Q ss_pred CCCCcEEecCc
Q 013345 130 GGGPDLIVDDG 140 (445)
Q Consensus 130 ~~~p~lilDDG 140 (445)
+|++|+=-|
T Consensus 75 --~~d~iv~~~ 83 (660)
T 1z7e_A 75 --SPDVIFSFY 83 (660)
T ss_dssp --CCSEEEEES
T ss_pred --CCCEEEEcC
Confidence 478777655
No 241
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.70 E-value=1.7e+02 Score=24.69 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=48.5
Q ss_pred CCCCCcEEEe-eecc-chhHHHHHHHHHh---------CCCEEEEeecCCCC--ChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 50 QPFKGAKITG-SLHM-TIQTAVLIETLTA---------LGAEVRWCSCNIFS--TQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 50 kPl~G~rI~~-~lHl-t~kTa~li~tL~a---------~GAeV~~~~~np~S--Tqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
-.|||.+.+. .+|+ +.....+.+.|.+ .||-|++=.++--+ --....+.|.+.|+.+++++|.+.++
T Consensus 8 ielKG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~~ 87 (120)
T 3ghf_A 8 IELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDAS 87 (120)
T ss_dssp CCCCCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCHH
T ss_pred EEEEcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcHH
Confidence 4689999866 7777 7777777777763 58888763332211 23566777788999999999988664
Q ss_pred HH
Q 013345 117 YW 118 (445)
Q Consensus 117 y~ 118 (445)
..
T Consensus 88 ~~ 89 (120)
T 3ghf_A 88 LK 89 (120)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 242
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=26.56 E-value=2.2e+02 Score=25.75 Aligned_cols=70 Identities=14% Similarity=-0.069 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC--CCeEEEecCCCHH-HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD--SASVFAWKGETLQ-EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~--Gi~V~A~~g~t~e-ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|.+++.|+ .. ++.+..+.+. ++.++. -+.+.+ +....++++.+.- +++++++-..|-
T Consensus 25 ~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~--g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 25 YGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQLGSDIVLQ-CDVAEDASIDTMFAELGKVW--PKFDGFVHSIGF 97 (265)
T ss_dssp HHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHTTC--SSEEEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHhcCCcEEEE-ccCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 356788999999999998887 33 3455555432 333332 244443 3334444444421 357888888773
No 243
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.55 E-value=3.7e+02 Score=25.20 Aligned_cols=95 Identities=17% Similarity=0.122 Sum_probs=52.1
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETLQ 115 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~e 115 (445)
|++-++..-+...+.-.|.+|.+.-=-..==...++.+++.||+|..+..++ +....+..+.|.. ++-.+.+
T Consensus 133 ~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~----~~~~~~~~~~g~~~~~~~~~~--- 205 (336)
T 4b7c_A 133 TGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA----EKCRFLVEELGFDGAIDYKNE--- 205 (336)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHTTCCSEEEETTTS---
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHcCCCEEEECCCH---
Confidence 4455554443344455788886543211222345567788999998876543 3333222556775 4444433
Q ss_pred HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 116 EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 116 ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
++...+.+.. +.+.++++|.-|.
T Consensus 206 ~~~~~~~~~~----~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 206 DLAAGLKREC----PKGIDVFFDNVGG 228 (336)
T ss_dssp CHHHHHHHHC----TTCEEEEEESSCH
T ss_pred HHHHHHHHhc----CCCceEEEECCCc
Confidence 3444444432 2368999998774
No 244
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=26.52 E-value=63 Score=32.16 Aligned_cols=49 Identities=12% Similarity=-0.057 Sum_probs=37.3
Q ss_pred cHHHhhccCCEEEec----CC-C------------CCCCCHHHHhcCcCCcEEeCCCC--Cccccccc
Q 013345 270 TLEDVLSDADIFVTT----TG-N------------KDIIMVDHMKKMKNNAIVCNIGH--FDNEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTa----TG-n------------~~vI~~eh~~~MKdgAILaN~Gh--fd~EId~~ 318 (445)
.+++|++.+|+++|- .| . .=.|+.+-|+.+|+++|+.-.+- -.+||+-+
T Consensus 227 d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~e 294 (328)
T 3grf_A 227 DCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTAS 294 (328)
T ss_dssp SHHHHHTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHH
T ss_pred CHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHH
Confidence 689999999999984 36 1 12388899999999999987775 66788743
No 245
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=26.44 E-value=3.3e+02 Score=23.85 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=46.3
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-CCCeEEEec-CC-CHHHHHHHHHHHHhc
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-DSASVFAWK-GE-TLQEYWWCTEKALDW 127 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-~Gi~V~A~~-g~-t~eey~~~~~~~l~~ 127 (445)
.|+|.+|.+.---.-=-..+++.|.+.|++|++++-|+- ..+++...+.+ .|..+.... +. +.++....++++.+.
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGE-RAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 356666543222122234567888999999999886542 22334444433 244443333 33 333444444444432
Q ss_pred CCCCCCcEEecCcc
Q 013345 128 GPGGGPDLIVDDGG 141 (445)
Q Consensus 128 ~~~~~p~lilDDGg 141 (445)
- +++++++-..|
T Consensus 83 ~--~~~d~vi~~Ag 94 (248)
T 2pnf_A 83 V--DGIDILVNNAG 94 (248)
T ss_dssp S--SCCSEEEECCC
T ss_pred c--CCCCEEEECCC
Confidence 1 35788887766
No 246
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.38 E-value=2.6e+02 Score=25.62 Aligned_cols=72 Identities=21% Similarity=0.189 Sum_probs=45.8
Q ss_pred HHHHHHHhCCCEEEEeecCCCC------ChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 69 VLIETLTALGAEVRWCSCNIFS------TQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~S------Tqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
.+++.|.+.|++|.+++-|+-. .-+.+++.+...|..+...+ +.+. ++....++++.+.- +++++++-+.
T Consensus 21 aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD~lvnnA 98 (274)
T 3e03_A 21 AIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTF--GGIDILVNNA 98 (274)
T ss_dssp HHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECC
T ss_pred HHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc--CCCCEEEECC
Confidence 5678899999999999887643 23566667766676665554 3333 33334444444321 3588888887
Q ss_pred ch
Q 013345 141 GD 142 (445)
Q Consensus 141 gd 142 (445)
|-
T Consensus 99 G~ 100 (274)
T 3e03_A 99 SA 100 (274)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 247
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=26.36 E-value=78 Score=28.60 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=28.4
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEE
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVR 82 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~ 82 (445)
.++|+|.+|-.+-...+....|.+.+.++||.|.
T Consensus 113 ~~lF~g~~~~~~~~~~~~~~~l~~li~~~GG~v~ 146 (209)
T 2etx_A 113 RRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYL 146 (209)
T ss_dssp SCTTTTCEEEECTTCSSCHHHHHHHHHHTTCEEC
T ss_pred CCCcCCcEEEEeCCCCCCHHHHHHHHHHCCCEEE
Confidence 4899999987776666677788899999999885
No 248
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=26.21 E-value=66 Score=31.72 Aligned_cols=49 Identities=22% Similarity=0.202 Sum_probs=38.7
Q ss_pred cHHHhhccCCEEEecC----CC------------CCCCCHHHHhcCcCCcEEeCCCC--Cccccccc
Q 013345 270 TLEDVLSDADIFVTTT----GN------------KDIIMVDHMKKMKNNAIVCNIGH--FDNEIDML 318 (445)
Q Consensus 270 ~l~eA~~~aDifVTaT----Gn------------~~vI~~eh~~~MKdgAILaN~Gh--fd~EId~~ 318 (445)
.+++|++.+|+++|-+ |. .=.|+.+-|+.+|+++|+.-.+= -.+||+-+
T Consensus 207 d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 207 DKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp CHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred CHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 6899999999999976 31 23488899999999999987775 45788743
No 249
>2php_A Uncharacterized protein MJ0236; chlorine ION, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.03A {Methanocaldococcus jannaschii DSM2661} SCOP: c.74.1.2
Probab=25.97 E-value=75 Score=29.41 Aligned_cols=80 Identities=28% Similarity=0.380 Sum_probs=55.1
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CCHH---HHHHHHHHHHhcCC
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ETLQ---EYWWCTEKALDWGP 129 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t~e---ey~~~~~~~l~~~~ 129 (445)
+.+.|.+-| +|-++.+....+.+++.+- |+ -..+++..+|.+ |..|.-+.. ..++ .--|-+.+++..-
T Consensus 70 ~p~FGaS~H----~Ar~lL~a~~~~P~iRsai-NI-ry~~~i~~~l~~-g~~v~~~dr~~ePee~~tm~W~i~~a~~~~- 141 (192)
T 2php_A 70 DIEFGASEH----IAKIILSASKFNPEIRACM-NI-KYDGGLIKLLKD-KFAVSSFDRKEEPPNVSTMEWGTKIACEKF- 141 (192)
T ss_dssp CEEETSCHH----HHHHHHHHHTTCTTCCEEE-EE-CCCHHHHHHHTT-TSCEEECCGGGCCTTSCHHHHHHHHHHHHH-
T ss_pred CCcCCCcHH----HHHHHHHHHHhCCCceEEE-EE-ecCHHHHHHHHc-CCeEEEECCCCCCcccchhhHHHHHHHHhc-
Confidence 344444444 5788899999999999765 44 445779999998 999855421 1112 4456777887532
Q ss_pred CCCCcEEecCcc
Q 013345 130 GGGPDLIVDDGG 141 (445)
Q Consensus 130 ~~~p~lilDDGg 141 (445)
++-|++|.|-|+
T Consensus 142 ~~~PdvIyd~G~ 153 (192)
T 2php_A 142 GGVPDIIYDRGG 153 (192)
T ss_dssp TSCCSEEEECCB
T ss_pred CCCCeEEEeCCC
Confidence 246999999998
No 250
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=25.95 E-value=66 Score=32.25 Aligned_cols=43 Identities=26% Similarity=0.464 Sum_probs=33.3
Q ss_pred CcceecHHHhhc-cCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCC
Q 013345 265 GLQVLTLEDVLS-DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIG 309 (445)
Q Consensus 265 Gf~V~~l~eA~~-~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~G 309 (445)
|-+.++.++.+. .+|||+-| ...++|+.+.+++|| ..+|+|..
T Consensus 218 ga~~v~~~ell~~~~DIliP~-A~~~~I~~~~~~~lk-~~iVie~A 261 (355)
T 1c1d_A 218 GHTAVALEDVLSTPCDVFAPC-AMGGVITTEVARTLD-CSVVAGAA 261 (355)
T ss_dssp TCEECCGGGGGGCCCSEEEEC-SCSCCBCHHHHHHCC-CSEECCSC
T ss_pred CCEEeChHHhhcCccceecHh-HHHhhcCHHHHhhCC-CCEEEECC
Confidence 444456677777 89999875 456789999999998 67888877
No 251
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.92 E-value=2.6e+02 Score=24.96 Aligned_cols=91 Identities=11% Similarity=-0.092 Sum_probs=48.6
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHh
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALD 126 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~ 126 (445)
..++++.+|.+.-=-.-==..+++.|.+.|+.|.++....-.........+...|..++... +.+. ++....++++.+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 34556666543221111123577889999999988764444555666777766666554443 3333 333344444443
Q ss_pred cCCCCCCcEEecCcc
Q 013345 127 WGPGGGPDLIVDDGG 141 (445)
Q Consensus 127 ~~~~~~p~lilDDGg 141 (445)
.- +++++++-..|
T Consensus 88 ~~--g~id~lv~~Ag 100 (256)
T 3ezl_A 88 EV--GEIDVLVNNAG 100 (256)
T ss_dssp HT--CCEEEEEECCC
T ss_pred hc--CCCCEEEECCC
Confidence 32 35788887766
No 252
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=25.91 E-value=2.9e+02 Score=23.29 Aligned_cols=71 Identities=17% Similarity=0.047 Sum_probs=44.5
Q ss_pred CCEEEEeecCCCCCh--HHHHHHHHhCCCeEEEec-------------CCCHHHHHHHHHHHHhcCCCCCCcEEe--cCc
Q 013345 78 GAEVRWCSCNIFSTQ--DHAAAAIARDSASVFAWK-------------GETLQEYWWCTEKALDWGPGGGPDLIV--DDG 140 (445)
Q Consensus 78 GAeV~~~~~np~STq--d~vaaaL~~~Gi~V~A~~-------------g~t~eey~~~~~~~l~~~~~~~p~lil--DDG 140 (445)
|--|.+....+.+.. ...+..|++.|..|+++- ..+.+++.+.+.+.++.....++-+++ .-|
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~G 83 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSFG 83 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETTH
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcccCceEEEEeChh
Confidence 333444433333322 467788888888888874 258889999998988765321344443 677
Q ss_pred chhhHHhh
Q 013345 141 GDATLLIH 148 (445)
Q Consensus 141 gdl~~~lh 148 (445)
|-++..+.
T Consensus 84 g~~a~~~a 91 (258)
T 3dqz_A 84 GINIALAA 91 (258)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766665
No 253
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=25.88 E-value=22 Score=32.20 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=16.0
Q ss_pred cCCHHHHhhcCCC-CCCCCCCC
Q 013345 421 RLTKEQADYISVS-ADGPYKPL 441 (445)
Q Consensus 421 ~Lt~~Q~~Yl~~~-~~gp~k~~ 441 (445)
-||+||++.|... ..|||||-
T Consensus 111 ~LS~eQa~~l~~~~~~~p~~~~ 132 (156)
T 1ssf_A 111 ILSLEQGNRLREQYGLGPYEAV 132 (156)
T ss_dssp EEEHHHHHTTTTTTSSCSCC--
T ss_pred EECHHHHHHHHHHhccCccccC
Confidence 4899999999866 57899874
No 254
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=25.85 E-value=1.8e+02 Score=25.79 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=51.2
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCC---CeEEEecC--CCHHHHHHHHHHH
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS---ASVFAWKG--ETLQEYWWCTEKA 124 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~G---i~V~A~~g--~t~eey~~~~~~~ 124 (445)
..|+|.++.+.-=-.-==..+++.|.+.|++|.+++-|+ ..-+++++.+.+.| +.++...- .+.++....++++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE-ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 347787764432211112356788999999999988664 22344555565543 44444433 3455554445554
Q ss_pred HhcCCCCCCcEEecCcch
Q 013345 125 LDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 125 l~~~~~~~p~lilDDGgd 142 (445)
.+.- +++++++-.-|-
T Consensus 89 ~~~~--g~id~lv~nAg~ 104 (247)
T 3i1j_A 89 EHEF--GRLDGLLHNASI 104 (247)
T ss_dssp HHHH--SCCSEEEECCCC
T ss_pred HHhC--CCCCEEEECCcc
Confidence 4321 258888877663
No 255
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=25.85 E-value=2.3e+02 Score=29.66 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=27.4
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeec
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSC 86 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~ 86 (445)
.|+|+|+++..-- ....-+++.|.++|.+|..+++
T Consensus 332 ~l~GKrv~i~~~~-~~~~~l~~~l~ElGm~vv~~~t 366 (533)
T 1mio_A 332 KLQGKTACLYVGG-SRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp HHTTCEEEEEESS-SHHHHHHHHHHHHTCEEEEEEE
T ss_pred HhCCCEEEEECCc-hHHHHHHHHHHHCCCEEEEEEe
Confidence 5699999986532 3566677888999999998875
No 256
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=25.82 E-value=2.5e+02 Score=26.95 Aligned_cols=68 Identities=15% Similarity=-0.005 Sum_probs=47.8
Q ss_pred CCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee----------cCCCCChHHHHHHHHhCCCeEEEecCCCHHHH
Q 013345 48 PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS----------CNIFSTQDHAAAAIARDSASVFAWKGETLQEY 117 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~----------~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey 117 (445)
..+||+|.+|..+-....+...+.+.+.+.||.+.-.- .++- + .....| .+.||+|+ +++-+
T Consensus 196 ~~~~f~g~~i~~tG~~~~~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~-g-~K~~~A-~~~gi~IV-----~~~Wl 267 (298)
T 3olc_X 196 KCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPK-G-QKYECA-KRWNVHCV-----TTQWF 267 (298)
T ss_dssp BCCTTTTCEEEECSCCHHHHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSC-S-HHHHHH-HHTTCEEE-----CHHHH
T ss_pred cccccCCeEEEEeCCCCccHHHHHHHHHHcCCEEeceecCCCceEEEEeCCC-c-hHHHHH-HHCCCeEE-----eHHHH
Confidence 45789999999998888888888899999999885211 1221 1 223333 34699997 67777
Q ss_pred HHHHHH
Q 013345 118 WWCTEK 123 (445)
Q Consensus 118 ~~~~~~ 123 (445)
++|+.+
T Consensus 268 ~dsi~~ 273 (298)
T 3olc_X 268 FDSIEK 273 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 777754
No 257
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=25.82 E-value=1.2e+02 Score=28.43 Aligned_cols=90 Identities=13% Similarity=-0.023 Sum_probs=50.0
Q ss_pred HHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHH-------hCCCeEEEecCCCHH
Q 013345 43 RAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA-------RDSASVFAWKGETLQ 115 (445)
Q Consensus 43 ~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~-------~~Gi~V~A~~g~t~e 115 (445)
.+.+....++++.+|.+.-=---==..+++.|.+.|.+|+++.-++-...+... .+. ..++.++.. +.+..
T Consensus 16 ~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-Dl~d~ 93 (352)
T 1sb8_A 16 YEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLD-EVRSLVSEKQWSNFKFIQG-DIRNL 93 (352)
T ss_dssp HHHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-HHHHHSCHHHHTTEEEEEC-CTTSH
T ss_pred HHhhchhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHH-HHhhhcccccCCceEEEEC-CCCCH
Confidence 333344445677776543221122245678888899999998876644433322 221 246665433 33322
Q ss_pred HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 116 EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 116 ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+.++++ ++++|+...|.
T Consensus 94 ---~~~~~~~~-----~~d~vih~A~~ 112 (352)
T 1sb8_A 94 ---DDCNNACA-----GVDYVLHQAAL 112 (352)
T ss_dssp ---HHHHHHHT-----TCSEEEECCSC
T ss_pred ---HHHHHHhc-----CCCEEEECCcc
Confidence 23445554 48999988874
No 258
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=25.77 E-value=2.4e+02 Score=26.31 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=42.8
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.||+|.++.-| ++.++.+++.+-.++..+ +.+ .++-...++++.+.- ++.|+++-+-|-
T Consensus 17 aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~--g~iDiLVNNAG~ 85 (247)
T 3ged_A 17 QICLDFLEAGDKVCFIDID-----EKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL--QRIDVLVNNACR 85 (247)
T ss_dssp HHHHHHHHTTCEEEEEESC-----HHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 4678899999999998754 345556666655554443 333 344445556665432 368999988763
No 259
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=25.71 E-value=1e+02 Score=29.12 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=38.3
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCC--EEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGA--EVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GA--eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-..+ +-+.+...+- .|.-.-+||+..|.++..++.+.||.|.||.
T Consensus 133 ir~iGvSn~~~~~---l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~s 188 (278)
T 1hw6_A 133 TRSIGVSNHLVPH---LERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWG 188 (278)
T ss_dssp EEEEEEESCCHHH---HHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEES
T ss_pred ccEEEecCCCHHH---HHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEec
Confidence 3578888885433 2233333332 4555677999999999999999999999995
No 260
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=25.66 E-value=1.5e+02 Score=26.99 Aligned_cols=88 Identities=11% Similarity=0.128 Sum_probs=48.2
Q ss_pred CCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCC--CeEEEec-CCC-HHHHHHHHHHHHhc
Q 013345 52 FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS--ASVFAWK-GET-LQEYWWCTEKALDW 127 (445)
Q Consensus 52 l~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~G--i~V~A~~-g~t-~eey~~~~~~~l~~ 127 (445)
|+|.++.+.-=-.-==..+++.|.+.|++|.+++-|+ +..+++++.+...| ..+..+. +.+ .++....++++.+.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV-GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh-HHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 6777765432111112457788899999999988765 22344555565555 2333332 333 33433344444332
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 109 ~--g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 H--SGVDICINNAGL 121 (279)
T ss_dssp H--CCCSEEEECCCC
T ss_pred C--CCCCEEEECCCC
Confidence 1 257888887763
No 261
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=25.64 E-value=2e+02 Score=24.72 Aligned_cols=75 Identities=12% Similarity=-0.070 Sum_probs=43.2
Q ss_pred chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcc-h
Q 013345 64 TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGG-D 142 (445)
Q Consensus 64 t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGg-d 142 (445)
......+++.|++.|-.|.++++++...... .+...|+.-+-..+....+.+..+.+-+...+ .-.+.++|+. |
T Consensus 55 ~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~---~l~~lgl~~~~~~~kpk~~~~~~~~~~~g~~~--~~~~~iGD~~~D 129 (188)
T 2r8e_A 55 NVRDGYGIRCALTSDIEVAIITGRKAKLVED---RCATLGITHLYQGQSNKLIAFSDLLEKLAIAP--ENVAYVGDDLID 129 (188)
T ss_dssp EHHHHHHHHHHHTTTCEEEEECSSCCHHHHH---HHHHHTCCEEECSCSCSHHHHHHHHHHHTCCG--GGEEEEESSGGG
T ss_pred ecccHHHHHHHHHCCCeEEEEeCCChHHHHH---HHHHcCCceeecCCCCCHHHHHHHHHHcCCCH--HHEEEECCCHHH
Confidence 4455568999999999999999876544433 33445776433334444444444444444321 1235666654 4
Q ss_pred h
Q 013345 143 A 143 (445)
Q Consensus 143 l 143 (445)
+
T Consensus 130 i 130 (188)
T 2r8e_A 130 W 130 (188)
T ss_dssp H
T ss_pred H
Confidence 4
No 262
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=25.58 E-value=1.9e+02 Score=25.96 Aligned_cols=71 Identities=24% Similarity=0.225 Sum_probs=42.1
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|++++-|+ ...+++++.+...|..+..++ +.+. ++....++++.+.- +++++++-..|-
T Consensus 17 ~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~--g~id~lv~nAg~ 89 (256)
T 1geg_A 17 AIALRLVKDGFAVAIADYND-ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL--GGFDVIVNNAGV 89 (256)
T ss_dssp HHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT--TCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh--CCCCEEEECCCC
Confidence 46788899999999987665 223445556655554443333 3333 33344444444332 358888887763
No 263
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=25.57 E-value=1.1e+02 Score=29.25 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=38.9
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCCE----EEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGAE----VRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GAe----V~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-.. .+.+.+...+.. +.-.-+||+..|.++..++.+.||.|.||.
T Consensus 161 ir~iGvSn~~~~---~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~s 218 (324)
T 3ln3_A 161 VXSIGVSNFNHR---QLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYG 218 (324)
T ss_dssp EEEEEEESCCHH---HHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEES
T ss_pred eeEEEecCCcHH---HHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEec
Confidence 356888887532 233444444433 555678999999999999999999999994
No 264
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=25.52 E-value=3.7e+02 Score=24.52 Aligned_cols=84 Identities=19% Similarity=0.104 Sum_probs=46.1
Q ss_pred CCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCH-HHHHHHHHHHH
Q 013345 47 GPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETL-QEYWWCTEKAL 125 (445)
Q Consensus 47 ~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~-eey~~~~~~~l 125 (445)
....+++|.+|.+.-=-.-==..+++.|.+.||+|.+++.|+-.. ...+..+.. +.+. ++....++++.
T Consensus 7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~-Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------VNVSDHFKI-DVTNEEEVKEAVEKTT 76 (269)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------TTSSEEEEC-CTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------cCceeEEEe-cCCCHHHHHHHHHHHH
Confidence 356788999986543211112357788999999999988766322 113333332 3333 33334444444
Q ss_pred hcCCCCCCcEEecCcch
Q 013345 126 DWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 126 ~~~~~~~p~lilDDGgd 142 (445)
+.- +++++++-.-|-
T Consensus 77 ~~~--g~iD~lv~nAg~ 91 (269)
T 3vtz_A 77 KKY--GRIDILVNNAGI 91 (269)
T ss_dssp HHH--SCCCEEEECCCC
T ss_pred HHc--CCCCEEEECCCc
Confidence 321 358888887763
No 265
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=25.45 E-value=57 Score=31.07 Aligned_cols=44 Identities=23% Similarity=0.453 Sum_probs=0.0
Q ss_pred cccCcHHHHHHhhhchhhhhcCCcceecHHHhhccCCEEEecCCCCCCCCHHH--HhcCcCCcEEeCCCCCccc
Q 013345 243 GCRHSLPDGLMRATDVMIALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH--MKKMKNNAIVCNIGHFDNE 314 (445)
Q Consensus 243 GtgqS~~dgi~R~Tn~lia~mdGf~V~~l~eA~~~aDifVTaTGn~~vI~~eh--~~~MKdgAILaN~Ghfd~E 314 (445)
|.|+|.++...+ ..+|+||| |... +| ......|--+..+||+ .|
T Consensus 185 GsG~~~~~~a~~---------------------~gaD~~IT--Gd~~----~h~~~~A~e~gi~~i~~GH~-tE 230 (267)
T 2fyw_A 185 GSGQSFYKDALA---------------------KGADVYIT--GDIY----YHTAQDMLSDGLLALDPGHY-IE 230 (267)
T ss_dssp SSCGGGHHHHHH---------------------TTCSEEEE--SCCC----HHHHHHHHHTTCEEEECCGG-GG
T ss_pred CCCHHHHHHHHH---------------------cCCCEEEE--ccCc----HHHHHHHHHCCCeEEECCcH-HH
No 266
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=25.29 E-value=1.2e+02 Score=28.13 Aligned_cols=90 Identities=11% Similarity=-0.061 Sum_probs=50.3
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
+++|.++.+.-=-.-==..+++.|.+.||+|.+++.+.-..-+.+++.+...|..+.... +.+. ++....++++.+.-
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 577877644221111123567889999999999875332333455666666666555443 3333 33333444444321
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+++++++-.-|-
T Consensus 106 --g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 --GRIDCLVNNAGI 117 (280)
T ss_dssp --SCCCEEEEECC-
T ss_pred --CCCCEEEECCCc
Confidence 358888888774
No 267
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=25.27 E-value=4.3e+02 Score=24.79 Aligned_cols=95 Identities=17% Similarity=0.010 Sum_probs=51.5
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETLQ 115 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~e 115 (445)
+++.+...-....+.-+|.+|.+.-=-..==...++.+++.||+|..+..|+ +.. +.+.+.|.. ++-.+.+
T Consensus 132 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~----~~~-~~~~~~ga~~~~~~~~~--- 203 (334)
T 3qwb_A 132 QVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD----EKL-KIAKEYGAEYLINASKE--- 203 (334)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH----HHH-HHHHHTTCSEEEETTTS---
T ss_pred HHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH----HHH-HHHHHcCCcEEEeCCCc---
Confidence 3444444333344555788886543112222334566778999999887543 332 344556765 4444333
Q ss_pred HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 116 EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 116 ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
++...+.+.. .+.+.++++|.-|.
T Consensus 204 ~~~~~~~~~~---~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 204 DILRQVLKFT---NGKGVDASFDSVGK 227 (334)
T ss_dssp CHHHHHHHHT---TTSCEEEEEECCGG
T ss_pred hHHHHHHHHh---CCCCceEEEECCCh
Confidence 3333343332 23468999998764
No 268
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=25.09 E-value=1.9e+02 Score=27.04 Aligned_cols=68 Identities=10% Similarity=-0.036 Sum_probs=48.2
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCC------eEEEec
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA------SVFAWK 110 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi------~V~A~~ 110 (445)
-.+.+++++|. +.-|+...-+|+++ ++...+.||+..++ |- +.++++.+..+.|+ +++.=
T Consensus 53 ~~I~~l~~~~p------~~~IGAGTVlt~~~---a~~ai~AGA~fivs---P~-~~~evi~~~~~~~v~~~~~~~~~PG- 118 (217)
T 3lab_A 53 AAISAIKKAVP------EAIVGAGTVCTADD---FQKAIDAGAQFIVS---PG-LTPELIEKAKQVKLDGQWQGVFLPG- 118 (217)
T ss_dssp HHHHHHHHHCT------TSEEEEECCCSHHH---HHHHHHHTCSEEEE---SS-CCHHHHHHHHHHHHHCSCCCEEEEE-
T ss_pred HHHHHHHHHCC------CCeEeeccccCHHH---HHHHHHcCCCEEEe---CC-CcHHHHHHHHHcCCCccCCCeEeCC-
Confidence 35567777772 36777776665555 57788999999886 32 56778888888899 88763
Q ss_pred CCCHHHHH
Q 013345 111 GETLQEYW 118 (445)
Q Consensus 111 g~t~eey~ 118 (445)
-.|++|-.
T Consensus 119 ~~TptE~~ 126 (217)
T 3lab_A 119 VATASEVM 126 (217)
T ss_dssp ECSHHHHH
T ss_pred CCCHHHHH
Confidence 26787743
No 269
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=25.08 E-value=1.2e+02 Score=31.50 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=37.6
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEE
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVF 107 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~ 107 (445)
...|++.||-+.-==-.-...+++.|.+.|++|..+=.++.+ ...+.|.+.||+|+
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~---~~~~~L~~~gi~~~ 69 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYP---PMSTQLEQAGVTIE 69 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCT---THHHHHHHTTCEEE
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCc---HHHHHHHHCCCEEE
Confidence 345777787554444555667899999999999987665532 34667888899996
No 270
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=25.00 E-value=1.7e+02 Score=26.72 Aligned_cols=71 Identities=13% Similarity=0.002 Sum_probs=40.7
Q ss_pred HHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
.+++.|.+.|++|.++.+..-..-+++++.+.+.|..+.... +.+. ++....++++.+.- +++++++-.-|
T Consensus 19 aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~id~lv~nAg 91 (258)
T 3oid_A 19 AAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF--GRLDVFVNNAA 91 (258)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 467889999999998633222233455566665565555443 3333 33334444444321 35788888776
No 271
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=24.94 E-value=31 Score=33.63 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=34.3
Q ss_pred CCcceecHHHhhccCCEEEecCCCCCC---CCHHHHhcCcCCcEEeCCCCCc
Q 013345 264 EGLQVLTLEDVLSDADIFVTTTGNKDI---IMVDHMKKMKNNAIVCNIGHFD 312 (445)
Q Consensus 264 dGf~V~~l~eA~~~aDifVTaTGn~~v---I~~eh~~~MKdgAILaN~Ghfd 312 (445)
.|+++.+.+++++.+|+||.|+-.... +..+-.+.||.|++|..++.+.
T Consensus 59 ~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~ 110 (338)
T 1np3_A 59 HGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHGFS 110 (338)
T ss_dssp TTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEESCCHH
T ss_pred CCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 366666888999999999999876432 1112223588899999877654
No 272
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=24.78 E-value=80 Score=30.63 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=36.3
Q ss_pred CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec--CCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 77 LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK--GETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 77 ~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~--g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
+.++|...-||.-... ....+.|||++.+. ..+.++|...+.+.|+. .+|++|+=-|
T Consensus 116 l~~~i~~Visn~~~~~----~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~---~~~Dlivla~ 174 (286)
T 3n0v_A 116 LGMDVVAVVSNHPDLE----PLAHWHKIPYYHFALDPKDKPGQERKVLQVIEE---TGAELVILAR 174 (286)
T ss_dssp SCCEEEEEEESSSTTH----HHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHH---HTCSEEEESS
T ss_pred CCcEEEEEEeCcHHHH----HHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHh---cCCCEEEecc
Confidence 3689988877764322 22245699998753 45677777666666643 1588876544
No 273
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=24.77 E-value=3.3e+02 Score=23.28 Aligned_cols=96 Identities=11% Similarity=0.027 Sum_probs=48.9
Q ss_pred ChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCH
Q 013345 36 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETL 114 (445)
Q Consensus 36 MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~ 114 (445)
.|++-+...-+...+.-+|.+|.+.---..==...++.+++.||+|..+..++ + -.+.+.+.|.. ++-...
T Consensus 21 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~----~-~~~~~~~~g~~~~~d~~~--- 92 (198)
T 1pqw_A 21 VAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD----A-KREMLSRLGVEYVGDSRS--- 92 (198)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH----H-HHHHHHTTCCSEEEETTC---
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH----H-HHHHHHHcCCCEEeeCCc---
Confidence 35555544433333444688876432111111234566778899998876542 2 23334455764 332222
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 115 QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 115 eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
+++...+.+... +.++++++|..|.
T Consensus 93 ~~~~~~~~~~~~---~~~~D~vi~~~g~ 117 (198)
T 1pqw_A 93 VDFADEILELTD---GYGVDVVLNSLAG 117 (198)
T ss_dssp STHHHHHHHHTT---TCCEEEEEECCCT
T ss_pred HHHHHHHHHHhC---CCCCeEEEECCch
Confidence 233333333322 2358999998763
No 274
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=24.68 E-value=1.8e+02 Score=26.03 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=41.2
Q ss_pred HHHHHHHhCCCEEEEeec-CCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWCSC-NIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~~~-np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.++.. |+ ...+++++.+...|..+..+. +.+ .++....++++.+.- +++++++-..|-
T Consensus 19 ~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~lv~nAg~ 92 (246)
T 2uvd_A 19 AIAIDLAKQGANVVVNYAGNE-QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF--GQVDILVNNAGV 92 (246)
T ss_dssp HHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 467888999999998775 43 223445556655554444433 333 334444444444321 258888887773
No 275
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=24.60 E-value=1.6e+02 Score=29.30 Aligned_cols=61 Identities=15% Similarity=-0.007 Sum_probs=42.8
Q ss_pred HHHHHHHhCCCCCCCCcEEEe-----eeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEE
Q 013345 39 LMACRAEFGPSQPFKGAKITG-----SLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVF 107 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~-----~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~ 107 (445)
|..|++++.. .+|+ .+|+. +.- ..=--=+++.|...|++|+++++.-|.-.+++. .+++++
T Consensus 155 l~Ti~e~~g~-~~l~-l~ia~a~~~~vGD-~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~-----~~~~~~ 220 (324)
T 1js1_X 155 LITIEEYKKT-ARPK-VVMTWAPHPRPLP-QAVPNSFAEWMNATDYEFVITHPEGYELDPKFV-----GNARVE 220 (324)
T ss_dssp HHHHHHHCSS-SSCE-EEEECCCCSSCCC-SHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHH-----TTCEEE
T ss_pred HHHHHHHcCC-CCee-EEEEEEcccccCC-cchHHHHHHHHHHCCCEEEEeCCcccCCChhhc-----cceEEE
Confidence 4567887632 3688 99998 555 222234778888999999999988887766654 366664
No 276
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=24.59 E-value=2.9e+02 Score=23.41 Aligned_cols=56 Identities=16% Similarity=0.053 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCeEEEec-------------CCCHHHHHHHHHHHHhcCCCCCCcEEe--cCcchhhHHhh
Q 013345 93 DHAAAAIARDSASVFAWK-------------GETLQEYWWCTEKALDWGPGGGPDLIV--DDGGDATLLIH 148 (445)
Q Consensus 93 d~vaaaL~~~Gi~V~A~~-------------g~t~eey~~~~~~~l~~~~~~~p~lil--DDGgdl~~~lh 148 (445)
+.++..|.+.|..|+++- ..+.+++.+.+.+.++.....++-+|+ .-||-+...+.
T Consensus 29 ~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 99 (267)
T 3sty_A 29 YKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAM 99 (267)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHH
Confidence 678888888888888874 268889999999988875222344443 77887766665
No 277
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=24.59 E-value=1.6e+02 Score=31.07 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred CCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe
Q 013345 53 KGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW 109 (445)
Q Consensus 53 ~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~ 109 (445)
+|-||+++++..++..+.+......||-.. ..||-.+.+.++..|...+..+.-.
T Consensus 138 ~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~v--pl~~~~~~~~l~~~l~~~~~~~li~ 192 (663)
T 1ry2_A 138 KGDTVAVYMPMVPEAIITLLAISRIGAIHS--VVFAGFSSNSLRDRINDGDSKVVIT 192 (663)
T ss_dssp TTCEEEECCCSSHHHHHHHHHHHHTTCEEE--ECCTTSCHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEE--eeCCCCCHHHHHHHHHhcCCeEEEE
Confidence 699999999999999999999999999443 5588888899999888777775544
No 278
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=24.58 E-value=1e+02 Score=32.35 Aligned_cols=54 Identities=19% Similarity=0.116 Sum_probs=45.3
Q ss_pred CCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEE
Q 013345 53 KGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFA 108 (445)
Q Consensus 53 ~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A 108 (445)
+|-||+++++..++..+.+......||-.. ..||-.+.++++..|...+..+.-
T Consensus 131 ~Gd~V~i~~~~~~e~vva~lA~~~~Gav~v--pl~~~~~~~~l~~~l~~~~~~~li 184 (652)
T 1pg4_A 131 KGDVVAIYMPMVPEAAVAMLACARIGAVHS--VIFGGFSPEAVAGCIIDSSSRLVI 184 (652)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHHTCEEE--ECCTTSCHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHcCcEEE--ecCCCCCHHHHHHHHHhcCCCEEE
Confidence 699999999999999999999999999443 458888888898888877776543
No 279
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=24.56 E-value=2.1e+02 Score=28.31 Aligned_cols=54 Identities=13% Similarity=0.123 Sum_probs=46.3
Q ss_pred CCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEE
Q 013345 53 KGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFA 108 (445)
Q Consensus 53 ~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A 108 (445)
+|-||+++++-.++..+.+-....+||-+.. -||-.+.++....|...+..+.-
T Consensus 47 ~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp--l~~~~~~~~l~~~l~~~~~~~li 100 (501)
T 3ipl_A 47 QQSRVGLYIDNSIQSIILIHACWLANIEIAM--INTRLTPNEMTNQMRSIDVQLIF 100 (501)
T ss_dssp CCSEEEEECCSSHHHHHHHHHHHHTTCEEEE--CCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe--cCccCCHHHHHHHHHhcCCCEEE
Confidence 8999999999999999999999999995543 48888999999999888776543
No 280
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=24.49 E-value=3.9e+02 Score=27.01 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=51.2
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcC
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWG 128 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~ 128 (445)
.++|+|.++.+.-=.--=-..+++.|.+.||.|.+++-++ ..++..+.+.+.++.++..-=.+.++-...++++.+.-
T Consensus 208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~--~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG--AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG--GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 3456776654432222223567889999999999887543 34444444455577766553333344444444444321
Q ss_pred CCCCCcEEecCcch
Q 013345 129 PGGGPDLIVDDGGD 142 (445)
Q Consensus 129 ~~~~p~lilDDGgd 142 (445)
+.+.+++|-.-|-
T Consensus 286 -g~~id~lV~nAGv 298 (454)
T 3u0b_A 286 -GGKVDILVNNAGI 298 (454)
T ss_dssp -TTCCSEEEECCCC
T ss_pred -CCCceEEEECCcc
Confidence 1137888877764
No 281
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=24.26 E-value=2e+02 Score=28.37 Aligned_cols=80 Identities=19% Similarity=0.084 Sum_probs=51.3
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeec------cchhHHHHHHHHHhCCCEEEEeec-CC-------C--CChHHHHHHHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLH------MTIQTAVLIETLTALGAEVRWCSC-NI-------F--STQDHAAAAIA 100 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lH------lt~kTa~li~tL~a~GAeV~~~~~-np-------~--STqd~vaaaL~ 100 (445)
-++.++|+...++.|+ |+||+..-. -..++..+++.|.+.|++..-.+. +. . ..+-+.++.++
T Consensus 213 eiv~aVr~avg~d~pV-~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir 291 (363)
T 3l5l_A 213 ETLAAVREVWPENLPL-TARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVR 291 (363)
T ss_dssp HHHHHHHTTSCTTSCE-EEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCceE-EEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHH
Confidence 3566777777666665 899986521 134678889999999988665443 11 1 12345666665
Q ss_pred hC-CCeEEEecCC-CHHHH
Q 013345 101 RD-SASVFAWKGE-TLQEY 117 (445)
Q Consensus 101 ~~-Gi~V~A~~g~-t~eey 117 (445)
+. ++||.+--|- |.++-
T Consensus 292 ~~~~iPVi~~GgI~s~e~a 310 (363)
T 3l5l_A 292 REAKLPVTSAWGFGTPQLA 310 (363)
T ss_dssp HHHTCCEEECSSTTSHHHH
T ss_pred HHcCCcEEEeCCCCCHHHH
Confidence 43 8999887665 45543
No 282
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=24.25 E-value=2.1e+02 Score=25.86 Aligned_cols=90 Identities=13% Similarity=-0.039 Sum_probs=50.3
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC---CCeEEEecC--CCHHHHHHHHHHH
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD---SASVFAWKG--ETLQEYWWCTEKA 124 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~---Gi~V~A~~g--~t~eey~~~~~~~ 124 (445)
..|+|.++.+.---.-==..+++.|.+.||+|.+++-|+ ..-+++++.+.+. .+.++..-- .+.++....++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNE-EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 457888765432211112356788999999999988654 2223445555432 344443322 3344444445555
Q ss_pred HhcCCCCCCcEEecCcch
Q 013345 125 LDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 125 l~~~~~~~p~lilDDGgd 142 (445)
.+.- +++++++-.-|-
T Consensus 87 ~~~~--g~id~lv~nAg~ 102 (252)
T 3f1l_A 87 AVNY--PRLDGVLHNAGL 102 (252)
T ss_dssp HHHC--SCCSEEEECCCC
T ss_pred HHhC--CCCCEEEECCcc
Confidence 4432 368888887773
No 283
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.22 E-value=1.7e+02 Score=27.00 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=48.9
Q ss_pred CCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHHHHHhcCC
Q 013345 52 FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTEKALDWGP 129 (445)
Q Consensus 52 l~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~~~l~~~~ 129 (445)
++|.++.+.-=-.-==..+++.|.+.||.|.++..+.-...+.+++.+...|..+.... +.+.+ +....++++.+.-
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 103 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF- 103 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 45666543221111123567888999999998755544455666666666665554443 34433 3333344444321
Q ss_pred CCCCcEEecCcch
Q 013345 130 GGGPDLIVDDGGD 142 (445)
Q Consensus 130 ~~~p~lilDDGgd 142 (445)
+++++++-+.|-
T Consensus 104 -g~iD~lvnnAG~ 115 (267)
T 3u5t_A 104 -GGVDVLVNNAGI 115 (267)
T ss_dssp -SCEEEEEECCCC
T ss_pred -CCCCEEEECCCC
Confidence 257888887773
No 284
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=23.94 E-value=2e+02 Score=25.63 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCCEEEEeec-CCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 68 AVLIETLTALGAEVRWCSC-NIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~-np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
..+++.|.+.|++|++++. ++ +..+.++..+...|..+.... +.+ .++....++++.+.- +++++++-..|
T Consensus 21 ~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~li~~Ag 94 (261)
T 1gee_A 21 KSMAIRFATEKAKVVVNYRSKE-DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF--GKLDVMINNAG 94 (261)
T ss_dssp HHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 3567888899999998876 32 223444555555555544333 333 333333444443321 25788888776
No 285
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=23.93 E-value=2e+02 Score=25.57 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=50.4
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~ 127 (445)
..|+|.++.+.-=-.-==..+++.|.+.|++|.+++.|+ ...+.++..+.+.+..+.... +.+ .++....++++.+.
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA-EAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346676654322111112357888999999999987654 233445566666665554443 233 33333444444432
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 84 ~--g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 F--GGIDYLVNNAAI 96 (253)
T ss_dssp H--SCCCEEEECCCC
T ss_pred c--CCCCEEEECCCc
Confidence 1 258888887763
No 286
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.75 E-value=1.8e+02 Score=25.88 Aligned_cols=88 Identities=13% Similarity=0.053 Sum_probs=48.9
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~ 128 (445)
.|+|.+|.+.-=-.-==..+++.|.+.|++|++++-|+ +..+++++.+...|..+.... +.+ .++....++++.+.-
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDE-AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46777765432222222457888999999999988664 222345555655554443333 333 333334444443321
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 89 --~~id~vi~~Ag 99 (260)
T 3awd_A 89 --GRVDILVACAG 99 (260)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 25788887766
No 287
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=23.64 E-value=3.4e+02 Score=24.83 Aligned_cols=86 Identities=14% Similarity=0.058 Sum_probs=48.7
Q ss_pred CCCcEEEeeecc--chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-C-CCeEEEecCCCH-HHHHHHHHHHHh
Q 013345 52 FKGAKITGSLHM--TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-D-SASVFAWKGETL-QEYWWCTEKALD 126 (445)
Q Consensus 52 l~G~rI~~~lHl--t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-~-Gi~V~A~~g~t~-eey~~~~~~~l~ 126 (445)
|+|.++.+.--- --==..+++.|.+.|++|.+++.|+ . .++.+..+.+ . ++.++.. +.+. ++....++++.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~-~~~~~~~l~~~~~~~~~~~~-Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-K-LEKRVREIAKGFGSDLVVKC-DVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG-G-GHHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH-H-HHHHHHHHHHhcCCeEEEEc-CCCCHHHHHHHHHHHHH
Confidence 778776533211 0111456788899999999988776 2 3445555643 2 3434332 4443 344444444443
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.- ++++++|-..|-
T Consensus 96 ~~--g~iD~lv~~Ag~ 109 (285)
T 2p91_A 96 NW--GSLDIIVHSIAY 109 (285)
T ss_dssp HT--SCCCEEEECCCC
T ss_pred Hc--CCCCEEEECCCC
Confidence 32 368999888773
No 288
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=23.63 E-value=1.5e+02 Score=27.32 Aligned_cols=51 Identities=12% Similarity=0.013 Sum_probs=38.1
Q ss_pred HHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHH
Q 013345 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ETLQEYWWCTEK 123 (445)
Q Consensus 71 i~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t~eey~~~~~~ 123 (445)
+|.+.++..++.+++.. ...++....|.+.||||+.... .+.+++...+..
T Consensus 52 ~E~i~~l~PDLIi~~~~--~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~ 103 (283)
T 2r79_A 52 AEGVLALRPDILIGTEE--MGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKK 103 (283)
T ss_dssp HHHHHTTCCSEEEECTT--CCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEeCc--cCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHH
Confidence 68999999999987542 2346688899999999998743 467777666643
No 289
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=23.54 E-value=2e+02 Score=24.29 Aligned_cols=26 Identities=4% Similarity=-0.293 Sum_probs=12.0
Q ss_pred HHHHHhCCCeEEEecCCCHHHHHHHH
Q 013345 96 AAAIARDSASVFAWKGETLQEYWWCT 121 (445)
Q Consensus 96 aaaL~~~Gi~V~A~~g~t~eey~~~~ 121 (445)
.+.+.+.|+.-+...|.+..+....+
T Consensus 105 ~~~~~~~G~d~~~~~g~~~~~~~~~l 130 (137)
T 1ccw_A 105 EKRFKDMGYDRVYAPGTPPEVGIADL 130 (137)
T ss_dssp HHHHHHTTCSEECCTTCCHHHHHHHH
T ss_pred HHHHHHCCCCEEECCCCCHHHHHHHH
Confidence 33444455554444444444444333
No 290
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=23.53 E-value=4.2e+02 Score=25.12 Aligned_cols=93 Identities=17% Similarity=-0.005 Sum_probs=51.8
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
+++.+...-+...+.-.|.+|.+.-=-..==...++.+++.||+|..+ +++ +. .+.+.+.|...+- +.++
T Consensus 134 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~----~~-~~~~~~lGa~~i~-~~~~--- 203 (343)
T 3gaz_A 134 VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG----SD-LEYVRDLGATPID-ASRE--- 203 (343)
T ss_dssp HHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH----HH-HHHHHHHTSEEEE-TTSC---
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH----HH-HHHHHHcCCCEec-cCCC---
Confidence 344454444444555578888754311222234456677899999887 543 22 3344556877633 3333
Q ss_pred HHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 117 YWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 117 y~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
+...+.+... +.++++++|.-|.
T Consensus 204 ~~~~~~~~~~---~~g~D~vid~~g~ 226 (343)
T 3gaz_A 204 PEDYAAEHTA---GQGFDLVYDTLGG 226 (343)
T ss_dssp HHHHHHHHHT---TSCEEEEEESSCT
T ss_pred HHHHHHHHhc---CCCceEEEECCCc
Confidence 3333433332 2468999998664
No 291
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=23.52 E-value=5.5e+02 Score=25.41 Aligned_cols=66 Identities=14% Similarity=0.070 Sum_probs=42.3
Q ss_pred CCCCCCcEEEeeeccchhH---HHHHHHHHhCCCEEEEeecCCCC-----ChHHHHHHHHhCCCeEEEecCCCHHH
Q 013345 49 SQPFKGAKITGSLHMTIQT---AVLIETLTALGAEVRWCSCNIFS-----TQDHAAAAIARDSASVFAWKGETLQE 116 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kT---a~li~tL~a~GAeV~~~~~np~S-----Tqd~vaaaL~~~Gi~V~A~~g~t~ee 116 (445)
..+|+|+.|+.. =-++-| .-+--.-..+|+.|...+.+-.| |-.|+|.-|... +.++.+|+-..+.
T Consensus 39 ~~~L~gk~la~l-F~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~-~D~IviR~~~~~~ 112 (333)
T 1duv_G 39 EAKLTGKNIALI-FEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM-YDGIQYRGYGQEI 112 (333)
T ss_dssp CCSCTTCEEEEE-ESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTT-CSEEEEECSCHHH
T ss_pred ccccCCCEEEEE-ecCCCccHHHHHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHh-CCEEEEEcCCchH
Confidence 345999888744 334433 33444566899999876544322 667888888777 4667777755433
No 292
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=23.39 E-value=1.5e+02 Score=28.80 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=44.3
Q ss_pred hHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEE
Q 013345 38 GLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFA 108 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A 108 (445)
+.+.+.++|. ++|.++.+.-.=..==..++..|...||.|.+|.++ | .+...++.++-|-|-|
T Consensus 138 gv~~lL~~~~----l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---t-~~L~~~~~~ADIVI~A 200 (276)
T 3ngx_A 138 AVIDIMDYYG----YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---T-KDIGSMTRSSKIVVVA 200 (276)
T ss_dssp HHHHHHHHHT----CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---C-SCHHHHHHHSSEEEEC
T ss_pred HHHHHHHHhC----cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---c-ccHHHhhccCCEEEEC
Confidence 5667788886 999999887754433345667788899999988643 3 3466777777765544
No 293
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.35 E-value=1.7e+02 Score=26.66 Aligned_cols=89 Identities=13% Similarity=0.112 Sum_probs=48.1
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCC-CeEEEec-CCCHH-HHHHHHHHHHhc
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS-ASVFAWK-GETLQ-EYWWCTEKALDW 127 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~G-i~V~A~~-g~t~e-ey~~~~~~~l~~ 127 (445)
.|+|.++.+.-=-.-==..+++.|.+.|++|.+++.|+ ..-+.+++.+.+.| ..+.... +.+.+ +....++++.+.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRST-ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46777654321111111346788899999999988654 22344555665544 3333332 44433 333334444432
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 86 ~--g~id~lvnnAg~ 98 (262)
T 3pk0_A 86 F--GGIDVVCANAGV 98 (262)
T ss_dssp H--SCCSEEEECCCC
T ss_pred h--CCCCEEEECCCC
Confidence 1 358888887773
No 294
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=23.31 E-value=98 Score=30.33 Aligned_cols=52 Identities=27% Similarity=0.223 Sum_probs=41.8
Q ss_pred ecHHHhhccCCEEEecCCCC---------------CCCCHHHHhcCcCCcEEeCCCCCccccccccc
Q 013345 269 LTLEDVLSDADIFVTTTGNK---------------DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320 (445)
Q Consensus 269 ~~l~eA~~~aDifVTaTGn~---------------~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L 320 (445)
..+++|++.+|+++|-.--. -.|+.+-|+++|.++|+.-.+=-..||+-+-+
T Consensus 205 ~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lPrg~EI~~eV~ 271 (299)
T 1pg5_A 205 ENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVD 271 (299)
T ss_dssp SCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSBCGGGG
T ss_pred CCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCCCCCccCHHHh
Confidence 35899999999999976543 24677888889999999999988888884433
No 295
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=23.22 E-value=94 Score=30.26 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=36.1
Q ss_pred CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec--CCCHHHHHHHHHHHHhcCCCCCCcEEecCc
Q 013345 77 LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK--GETLQEYWWCTEKALDWGPGGGPDLIVDDG 140 (445)
Q Consensus 77 ~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~--g~t~eey~~~~~~~l~~~~~~~p~lilDDG 140 (445)
+.++|.+.-||.-.. .....+.|||++.+. ..+.++|...+.+.|+. .+|++|+=-|
T Consensus 121 l~~~i~~Visn~~~~----~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~---~~~Dlivla~ 179 (292)
T 3lou_A 121 LKMDIVGIVSNHPDF----APLAAQHGLPFRHFPITADTKAQQEAQWLDVFET---SGAELVILAR 179 (292)
T ss_dssp SCCEEEEEEESSSTT----HHHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHH---HTCSEEEESS
T ss_pred CCcEEEEEEeCcHHH----HHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHH---hCCCEEEecC
Confidence 468998877776332 222245699999753 45677777666666643 1488776444
No 296
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=23.21 E-value=72 Score=32.46 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=28.6
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS 85 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~ 85 (445)
.||+|+||.-..++-+- .+--..|.++||||.-.=
T Consensus 13 ~pL~GirVldls~~~aG-P~a~~~LADlGAeVIKVE 47 (408)
T 1xk7_A 13 GPLAGLRVVFSGIEIAG-PFAGQMFAEWGAEVIWIE 47 (408)
T ss_dssp STTTTCEEEEECCSSHH-HHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEcCCcChH-HHHHHHHHHcCCcEEEEc
Confidence 69999999998887753 356678999999998653
No 297
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=23.16 E-value=39 Score=30.45 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=29.7
Q ss_pred CcceecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCC
Q 013345 265 GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 311 (445)
Q Consensus 265 Gf~V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghf 311 (445)
|.++...+++++.+|++|.||....+-..-.+..+..|+++.+++..
T Consensus 71 g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~l~~~~~~~~vv~~s~g 117 (215)
T 2vns_A 71 AAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQLAGKILVDVSNP 117 (215)
T ss_dssp TSEEEEHHHHTTSCSEEEECSCGGGSGGGGGGHHHHTTCEEEECCCC
T ss_pred CCceecHHHHHhCCCEEEECCChHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 44445788999999999999986431111113333367888776643
No 298
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=23.14 E-value=1.2e+02 Score=29.34 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=38.5
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCC----EEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGA----EVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GA----eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-.. .+.+.+...+- .|.-.-.||+..|.++..++.+.||.|.||.
T Consensus 160 ir~iGvSn~~~~---~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~s 217 (331)
T 1s1p_A 160 AKSIGVSNFNRR---QLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYS 217 (331)
T ss_dssp EEEEEEESCCHH---HHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEES
T ss_pred ccEEEEeCCCHH---HHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEec
Confidence 357888887432 23333333333 4555678999999999999999999999994
No 299
>3hn0_A Nitrate transport protein; ABC transporter, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.75A {Parabacteroides distasonis}
Probab=23.14 E-value=70 Score=29.87 Aligned_cols=54 Identities=11% Similarity=-0.076 Sum_probs=36.9
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCC-ChHHHHHHHHhCCCeEE
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS-TQDHAAAAIARDSASVF 107 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~S-Tqd~vaaaL~~~Gi~V~ 107 (445)
||||+||++.-.-+.....|-..|.+.|-+|.+. ..+ +.+++.+||.+..|...
T Consensus 93 ~LkGK~Iav~~~gs~~~~ll~~~L~~~Gldv~~~---~~~~~~~~~~~al~~G~vDa~ 147 (283)
T 3hn0_A 93 PLKEPALYVFGNGTTPDILTRYYLGRQRLDYPLN---YAFNTAGEITQGILAGKVNRA 147 (283)
T ss_dssp SCCSCCEECSSTTSHHHHHHHHHHHHHTCCCCEE---CSCCSHHHHHHHHHHTSCSEE
T ss_pred CCCCCEEEecCCCCcHHHHHHHHHHHcCCceEEE---EccCCHHHHHHHHHcCCCCEE
Confidence 3999999976444555555656677778765543 233 57889999987767653
No 300
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.00 E-value=4.4e+02 Score=24.16 Aligned_cols=90 Identities=17% Similarity=0.058 Sum_probs=47.4
Q ss_pred hCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHH
Q 013345 46 FGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEK 123 (445)
Q Consensus 46 ~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~ 123 (445)
|..+..|+|.++.+.-=-.-==..+++.|.+.|++|.+++.|+ +.......+.|..++..+ +.+. ++....+++
T Consensus 19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE----DAAVRVANEIGSKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH----HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH
Confidence 3455678888865432212222357788999999999987653 322222222233333332 3333 333333444
Q ss_pred HHhcCCCCCCcEEecCcc
Q 013345 124 ALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 124 ~l~~~~~~~p~lilDDGg 141 (445)
+.+.- +++++++-.-|
T Consensus 95 ~~~~~--g~iD~lv~nAg 110 (277)
T 4dqx_A 95 TTAKW--GRVDVLVNNAG 110 (277)
T ss_dssp HHHHH--SCCCEEEECCC
T ss_pred HHHHc--CCCCEEEECCC
Confidence 44321 35888888877
No 301
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=22.91 E-value=2.4e+02 Score=26.90 Aligned_cols=49 Identities=14% Similarity=0.003 Sum_probs=35.3
Q ss_pred cEEEeee-----ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 55 AKITGSL-----HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 55 ~rI~~~l-----Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
.||.+.. |+.+ ...|++.|.+.|-+|.+.++ . . ...+...|++++...+
T Consensus 21 MrIl~~~~~~~Ghv~~-~~~La~~L~~~GheV~v~~~-~--~----~~~~~~~G~~~~~~~~ 74 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFP-LIQLAWGFRTAGHDVLIAVA-E--H----ADRAAAAGLEVVDVAP 74 (398)
T ss_dssp CEEEEECCSSHHHHGG-GHHHHHHHHHTTCEEEEEES-S--C----HHHHHTTTCEEEESST
T ss_pred CEEEEEcCCCcchHhH-HHHHHHHHHHCCCEEEEecc-c--h----HHHHHhCCCeeEecCC
Confidence 5776664 4444 56789999999999999875 3 2 3455667999987764
No 302
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=22.89 E-value=2.8e+02 Score=25.82 Aligned_cols=88 Identities=15% Similarity=0.062 Sum_probs=50.3
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
+|+|.++.+.-=---==..+++.|.+.|++|++++-|+ ...+++++.+...|..+..+. +.+. ++....++++.+.-
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQ-ELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57888765432211222457788999999999987654 223445555655554333332 3333 34444445444322
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
++++++|-..|
T Consensus 110 --g~iD~lvnnAg 120 (291)
T 3cxt_A 110 --GIIDILVNNAG 120 (291)
T ss_dssp --CCCCEEEECCC
T ss_pred --CCCcEEEECCC
Confidence 35888888877
No 303
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=22.88 E-value=45 Score=31.43 Aligned_cols=37 Identities=14% Similarity=-0.014 Sum_probs=23.4
Q ss_pred CCCCCCCCcEEEeeeccchhH---HHHHHHHHhCCCEEEE
Q 013345 47 GPSQPFKGAKITGSLHMTIQT---AVLIETLTALGAEVRW 83 (445)
Q Consensus 47 ~~~kPl~G~rI~~~lHlt~kT---a~li~tL~a~GAeV~~ 83 (445)
+..+||.|.||.+.-.-..+. .-+.+.|.+.|++|..
T Consensus 14 ~~~~~l~g~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~ 53 (286)
T 1jr2_A 14 SGHIEGRHMKVLLLKDAKEDDCGQDPYIRELGLYGLEATL 53 (286)
T ss_dssp --------CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEE
T ss_pred ccchhhcCCEEEEEcCCCCCCCCCcHHHHHHHHCCCceEE
Confidence 567999999999887654444 7889999999999864
No 304
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=22.79 E-value=1.6e+02 Score=27.82 Aligned_cols=82 Identities=22% Similarity=0.185 Sum_probs=50.4
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHHHHhcCC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG-ETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g-~t~eey~~~~~~~l~~~~ 129 (445)
.|+|+.+.+.-=-.-==...++.|.+.||.|.++.-| ..+++++.+.+.|..+.+... .+.++ .+++++++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~---~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~-- 77 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR---APDETLDIIAKDGGNASALLIDFADPL---AAKDSFTD-- 77 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSSTT--
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCC---cHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHHHh--
Confidence 3667665432111111134678899999999998754 347788888888887776653 23222 22333333
Q ss_pred CCCCcEEecCcc
Q 013345 130 GGGPDLIVDDGG 141 (445)
Q Consensus 130 ~~~p~lilDDGg 141 (445)
++.|+++-+-|
T Consensus 78 -g~iDiLVNNAG 88 (247)
T 4hp8_A 78 -AGFDILVNNAG 88 (247)
T ss_dssp -TCCCEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 46788888877
No 305
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=22.78 E-value=91 Score=29.80 Aligned_cols=51 Identities=14% Similarity=0.033 Sum_probs=35.1
Q ss_pred CcEEEeee-----ccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 54 GAKITGSL-----HMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 54 G~rI~~~l-----Hlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
..||..+. |+. ....|++.|.+.|-+|++.+. ++....+...|++++...+
T Consensus 15 ~MrIl~~~~~~~gh~~-~~~~La~~L~~~GheV~v~~~------~~~~~~~~~~G~~~~~~~~ 70 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVM-PLVPLSWALRAAGHEVLVAAS------ENMGPTVTGAGLPFAPTCP 70 (398)
T ss_dssp CCEEEEECCSSHHHHG-GGHHHHHHHHHTTCEEEEEEE------GGGHHHHHHTTCCEEEEES
T ss_pred ceEEEEEcCCCcchHH-HHHHHHHHHHHCCCEEEEEcC------HHHHHHHHhCCCeeEecCC
Confidence 35776553 322 256799999999999998764 2244556678999888764
No 306
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=22.74 E-value=3.1e+02 Score=25.24 Aligned_cols=90 Identities=17% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCC------ChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHH
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS------TQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTE 122 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~S------Tqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~ 122 (445)
.|+|.++.+.-=---==..+++.|.+.|++|.+++-|+-. .-++++..+...|..+.... +.+.. +....++
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3667665432211111235778899999999999887643 34566777766676665554 33333 3333344
Q ss_pred HHHhcCCCCCCcEEecCcch
Q 013345 123 KALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 123 ~~l~~~~~~~p~lilDDGgd 142 (445)
++.+.- +++++++-+.|-
T Consensus 86 ~~~~~~--g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQF--GGIDICVNNASA 103 (285)
T ss_dssp HHHHHH--SCCSEEEECCCC
T ss_pred HHHHHc--CCCCEEEECCCC
Confidence 444321 358888888774
No 307
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=22.70 E-value=1.5e+02 Score=28.49 Aligned_cols=55 Identities=13% Similarity=0.034 Sum_probs=39.4
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCC--EEEEeecCCCCChHHHHHHHHhCCCeEEEecC
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGA--EVRWCSCNIFSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GA--eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
=..||+|-|-.. .+.+.+...+- .|.-.-.||+..+.++..++.+.||.|.||.-
T Consensus 146 ir~iGvSn~~~~---~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sp 202 (298)
T 1vp5_A 146 VRAIGVSNFYPD---RLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGP 202 (298)
T ss_dssp EEEEEEESCCHH---HHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEEST
T ss_pred ccEEEecCCCHH---HHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEecc
Confidence 347888887432 33344444444 45566779999999999999999999999953
No 308
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=22.70 E-value=1.9e+02 Score=27.04 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=51.6
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
.|+|.++.+.-=-.-==..+++.|.+.|++|++++-|+ +.-+.+++.+...|..+.... +.+. ++....++++.+.-
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ-PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 47787765432111112357788999999999988765 233445556666665544333 3333 33444444444321
Q ss_pred CCCCCcEEecCcchh
Q 013345 129 PGGGPDLIVDDGGDA 143 (445)
Q Consensus 129 ~~~~p~lilDDGgdl 143 (445)
+++++++-+.|-.
T Consensus 107 --g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 --GGVDVVFSNAGIV 119 (301)
T ss_dssp --SSCSEEEECCCCC
T ss_pred --CCCCEEEECCCcC
Confidence 2588888887743
No 309
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=22.63 E-value=1.3e+02 Score=28.61 Aligned_cols=54 Identities=11% Similarity=-0.115 Sum_probs=38.3
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCC--EEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGA--EVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GA--eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-..+ +-+.+...+- .|.-.-.||+..+.++..++.+.||.|+||.
T Consensus 141 ir~iGvSn~~~~~---l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~s 196 (283)
T 2wzm_A 141 ARSIGVCNFGAED---LETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYG 196 (283)
T ss_dssp EEEEEEESCCHHH---HHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEEC
T ss_pred ccEEEEcCCCHHH---HHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEec
Confidence 3578888885333 3333333333 4555677999999999999999999999995
No 310
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=22.55 E-value=1.4e+02 Score=27.52 Aligned_cols=90 Identities=12% Similarity=-0.035 Sum_probs=49.7
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~ 127 (445)
+.|+|.++.+.-=-.-==..+++.|.+.||+|.+++.|+ ..-+++++.+.+.|..+.... +.+ .++....++++.+.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTE-AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 457887765321111112356788999999999987654 223445555655554443332 333 33444444444432
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-+-|-
T Consensus 103 ~--g~iD~lvnnAg~ 115 (270)
T 3ftp_A 103 F--GALNVLVNNAGI 115 (270)
T ss_dssp H--SCCCEEEECCCC
T ss_pred c--CCCCEEEECCCC
Confidence 1 357888887773
No 311
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=22.39 E-value=2.1e+02 Score=26.18 Aligned_cols=89 Identities=19% Similarity=0.147 Sum_probs=49.7
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCC--------CChHHHH---HHHHhCCCeEEEec-CCCH-HHH
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF--------STQDHAA---AAIARDSASVFAWK-GETL-QEY 117 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~--------STqd~va---aaL~~~Gi~V~A~~-g~t~-eey 117 (445)
.|+|.++.+.-=-.-==..+++.|.+.|++|.+++-|+- ++.+... +.+.+.|..++..+ +.+. ++.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 467776544321111123577899999999999887642 3344333 34445565555443 3333 333
Q ss_pred HHHHHHHHhcCCCCCCcEEecCcc
Q 013345 118 WWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 118 ~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
...++++.+.- +++++++-.-|
T Consensus 87 ~~~~~~~~~~~--g~id~lv~nAg 108 (281)
T 3s55_A 87 ESFVAEAEDTL--GGIDIAITNAG 108 (281)
T ss_dssp HHHHHHHHHHH--TCCCEEEECCC
T ss_pred HHHHHHHHHhc--CCCCEEEECCC
Confidence 44444444321 35888887776
No 312
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=22.35 E-value=1.3e+02 Score=28.88 Aligned_cols=53 Identities=15% Similarity=0.085 Sum_probs=38.1
Q ss_pred cEEEeeeccchhHHHHHHHHHhCCCE----EEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 55 AKITGSLHMTIQTAVLIETLTALGAE----VRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 55 ~rI~~~lHlt~kTa~li~tL~a~GAe----V~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
..||+|-|-.. .+.+.+...+.. |.-.-+||+..|.++..++.+.||.|.||.
T Consensus 164 r~iGvSn~~~~---~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~s 220 (326)
T 3buv_A 164 KSLGVSNFNRR---QLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYS 220 (326)
T ss_dssp EEEEEESCCHH---HHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEES
T ss_pred cEEEEeCCCHH---HHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEec
Confidence 57888887432 233334344433 555678999999999999999999999995
No 313
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.30 E-value=2.5e+02 Score=25.96 Aligned_cols=91 Identities=18% Similarity=0.097 Sum_probs=49.4
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC-CCeEEEec-CCCHH-HHHHHHHHHHh
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD-SASVFAWK-GETLQ-EYWWCTEKALD 126 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~-Gi~V~A~~-g~t~e-ey~~~~~~~l~ 126 (445)
..|+|.++.+.-=-.-==..+++.|.+.||+|.+++.+.-...+.+++.+... +..+.... +.+.+ +....++++.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45778775432211111235778899999999998753323334455555543 44454443 33333 33334444443
Q ss_pred cCCCCCCcEEecCcch
Q 013345 127 WGPGGGPDLIVDDGGD 142 (445)
Q Consensus 127 ~~~~~~p~lilDDGgd 142 (445)
.- +++++++-.-|-
T Consensus 101 ~~--g~iD~lv~nAg~ 114 (281)
T 3v2h_A 101 RF--GGADILVNNAGV 114 (281)
T ss_dssp HT--SSCSEEEECCCC
T ss_pred HC--CCCCEEEECCCC
Confidence 32 358888887773
No 314
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.25 E-value=2.2e+02 Score=25.82 Aligned_cols=89 Identities=20% Similarity=0.009 Sum_probs=49.6
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
.|+|.++.+.-=-.-==..+++.|.+.||+|.++..+.-...+.+++.+.+.|..+.... +.+. ++-...++++.+.-
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 467776554321111124577889999999999855443444556666666565444333 3333 33334444444321
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-.-|
T Consensus 85 --g~id~lv~nAg 95 (259)
T 3edm_A 85 --GEIHGLVHVAG 95 (259)
T ss_dssp --CSEEEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 25788777665
No 315
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=22.20 E-value=2.6e+02 Score=27.07 Aligned_cols=41 Identities=20% Similarity=0.206 Sum_probs=30.1
Q ss_pred hHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCC
Q 013345 66 QTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGE 112 (445)
Q Consensus 66 kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~ 112 (445)
....|++.|++.|-+|++++.. +....+...|++++...+.
T Consensus 16 p~~~La~~L~~~Gh~V~v~~~~------~~~~~v~~~g~~~~~l~~~ 56 (404)
T 3h4t_A 16 PLVALAARLRELGADARMCLPP------DYVERCAEVGVPMVPVGRA 56 (404)
T ss_dssp HHHHHHHHHHHTTCCEEEEECG------GGHHHHHHTTCCEEECSSC
T ss_pred HHHHHHHHHHHCCCeEEEEeCH------HHHHHHHHcCCceeecCCC
Confidence 3566999999999999997632 2344556679999888654
No 316
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=22.13 E-value=2e+02 Score=26.07 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=41.6
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
..+++.|.+.|++|.+++-|+ +.-+++++.+.+.|..+...+ +.+. ++....++++.+.- +++++++-.-|
T Consensus 20 ~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~id~lv~nAg 92 (257)
T 3imf_A 20 KGMATRFAKEGARVVITGRTK-EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF--GRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 356788999999999987654 223445555555554444333 3333 33333444444321 35788887776
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=22.06 E-value=2.3e+02 Score=27.09 Aligned_cols=85 Identities=12% Similarity=-0.048 Sum_probs=47.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCE-EEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAE-VRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGP 129 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAe-V~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~ 129 (445)
.-.|.+|.+.-- ..==...++.+++.||+ |..+.+++ ..-+.+..| ...+-.+.....+.+++.+.+.+...
T Consensus 177 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~--- 249 (363)
T 3m6i_A 177 VRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDE--GRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFG--- 249 (363)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCH--HHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTS---
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHHHh-chhcccccccccchHHHHHHHHHHhC---
Confidence 346888876432 22223345667789998 77776654 223344444 22222333334456777666655432
Q ss_pred CCCCcEEecCcch
Q 013345 130 GGGPDLIVDDGGD 142 (445)
Q Consensus 130 ~~~p~lilDDGgd 142 (445)
+.++++++|.-|.
T Consensus 250 g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 250 GIEPAVALECTGV 262 (363)
T ss_dssp SCCCSEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 3479999997653
No 318
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=22.04 E-value=1.2e+02 Score=28.90 Aligned_cols=54 Identities=19% Similarity=0.117 Sum_probs=38.5
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCC----EEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGA----EVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GA----eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
=..||+|-|-.. .+.+.+...+- .|.-.-+||+..|+++..++.+.||.|.||.
T Consensus 154 ir~iGvSn~~~~---~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~s 211 (316)
T 1us0_A 154 VKAIGISNFNHL---QVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYS 211 (316)
T ss_dssp BSCEEEESCCHH---HHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEES
T ss_pred ccEEEEecCCHH---HHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEec
Confidence 357899988432 23333333333 4555678999999999999999999999995
No 319
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=21.88 E-value=1.1e+02 Score=29.46 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=38.1
Q ss_pred cEEEeeeccchhHHHHHHHHHhCCC----EEEEeecCCCCChHHHHHHHHhCCCeEEEec
Q 013345 55 AKITGSLHMTIQTAVLIETLTALGA----EVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110 (445)
Q Consensus 55 ~rI~~~lHlt~kTa~li~tL~a~GA----eV~~~~~np~STqd~vaaaL~~~Gi~V~A~~ 110 (445)
..||+|-|-.. .+.+.+...+- .|.-.-+||+..|.++..++.+.||.|.||.
T Consensus 161 r~iGvSn~~~~---~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~s 217 (323)
T 1afs_A 161 KSIGVSNFNCR---QLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYC 217 (323)
T ss_dssp EEEEEESCCHH---HHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEES
T ss_pred CEEEeeCCCHH---HHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEec
Confidence 47888887432 23333333343 4555678999999999999999999999994
No 320
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=21.87 E-value=4.9e+02 Score=24.29 Aligned_cols=95 Identities=19% Similarity=0.144 Sum_probs=51.5
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeE-EEecCCCHH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASV-FAWKGETLQ 115 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V-~A~~g~t~e 115 (445)
|++-+...-+...++-+|.++.+.---..==...++.+++.||+|..+..+ ++.. +.+.+.|... +-... .+
T Consensus 129 ~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~----~~~~-~~~~~~g~~~~~d~~~--~~ 201 (333)
T 1v3u_A 129 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS----DEKI-AYLKQIGFDAAFNYKT--VN 201 (333)
T ss_dssp HHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS----HHHH-HHHHHTTCSEEEETTS--CS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHH-HHHHhcCCcEEEecCC--HH
Confidence 445555444344455578887654321222234567778899999887643 2333 3335557643 32322 13
Q ss_pred HHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 116 EYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 116 ey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
++...+.+... ++.++++|.-|.
T Consensus 202 ~~~~~~~~~~~----~~~d~vi~~~g~ 224 (333)
T 1v3u_A 202 SLEEALKKASP----DGYDCYFDNVGG 224 (333)
T ss_dssp CHHHHHHHHCT----TCEEEEEESSCH
T ss_pred HHHHHHHHHhC----CCCeEEEECCCh
Confidence 33334443322 368999999774
No 321
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=21.81 E-value=93 Score=31.14 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=52.4
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeec---c-----chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC-CCeEE
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLH---M-----TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD-SASVF 107 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lH---l-----t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~-Gi~V~ 107 (445)
-++.++|+....+ |+ |+||+..-. + ..++..+++.|.+.|++..-.++-. + ..+.++.+++. ++||.
T Consensus 208 eiv~aVr~~vg~~-~v-~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~-~~~~~~~ik~~~~iPvi 283 (362)
T 4ab4_A 208 EVTDAAIEVWGAQ-RV-GVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-A-DDSIGPLIKEAFGGPYI 283 (362)
T ss_dssp HHHHHHHHHHCGG-GE-EEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-C-TTCCHHHHHHHHCSCEE
T ss_pred HHHHHHHHhcCCC-ce-EEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-C-CHHHHHHHHHHCCCCEE
Confidence 4677888888766 65 788886421 1 2356889999999999876554322 1 12455666543 88999
Q ss_pred EecCCCHHHHHH
Q 013345 108 AWKGETLQEYWW 119 (445)
Q Consensus 108 A~~g~t~eey~~ 119 (445)
+--|-|.++...
T Consensus 284 ~~Ggit~e~a~~ 295 (362)
T 4ab4_A 284 VNERFDKASANA 295 (362)
T ss_dssp EESSCCHHHHHH
T ss_pred EeCCCCHHHHHH
Confidence 887877766443
No 322
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=21.80 E-value=4.6e+02 Score=25.20 Aligned_cols=97 Identities=21% Similarity=0.172 Sum_probs=58.1
Q ss_pred HHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEE--e
Q 013345 32 AEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFA--W 109 (445)
Q Consensus 32 a~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A--~ 109 (445)
.++-.|++..+++++ ++.| |++ |.+..++-+.|.+ ||.+.=.- +-+ ..++.+...++.|++|.. +
T Consensus 75 ~~rv~pvi~~l~~~~-------~~pi--SID-T~~~~va~aAl~a-Ga~iINdv-sg~-~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 75 LQRVIPVVEAIAQRF-------EVWI--SVD-TSKPEVIRESAKV-GAHIINDI-RSL-SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp HHHHHHHHHHHHHHC-------CCEE--EEE-CCCHHHHHHHHHT-TCCEEEET-TTT-CSTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhhc-------CCeE--EEe-CCCHHHHHHHHHc-CCCEEEEC-CCC-CCHHHHHHHHHhCCeEEEEcc
Confidence 344568888888764 3444 443 5667777777776 89887322 112 345566666778998877 4
Q ss_pred cCC--C--------------HHHHHHHHHHHHhcCCCCCC-cEEecCcchh
Q 013345 110 KGE--T--------------LQEYWWCTEKALDWGPGGGP-DLIVDDGGDA 143 (445)
Q Consensus 110 ~g~--t--------------~eey~~~~~~~l~~~~~~~p-~lilDDGgdl 143 (445)
+|. | .+.+.+.++++.+. |-.+ ++|+|-|--+
T Consensus 142 ~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~--Gi~~~~IilDPg~gf 190 (282)
T 1aj0_A 142 QGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQA--GIAKEKLLLDPGFGF 190 (282)
T ss_dssp SSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCTTS
T ss_pred CCCCccccccCccchHHHHHHHHHHHHHHHHHHc--CCChhhEEEeCCCCc
Confidence 443 2 34445555556553 2222 7999987433
No 323
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=21.77 E-value=3.8e+02 Score=25.54 Aligned_cols=95 Identities=19% Similarity=0.135 Sum_probs=52.5
Q ss_pred ChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCH
Q 013345 36 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETL 114 (445)
Q Consensus 36 MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~ 114 (445)
.|++-+...-+...+.-.|.+|.+.-=-..==...++.+++.||+|..+..++ + -.+.+.+.|.. ++-.+.+
T Consensus 150 ~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~----~-~~~~~~~lGa~~~~~~~~~-- 222 (353)
T 4dup_A 150 ETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST----G-KCEACERLGAKRGINYRSE-- 222 (353)
T ss_dssp HHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH----H-HHHHHHHHTCSEEEETTTS--
T ss_pred hHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH----H-HHHHHHhcCCCEEEeCCch--
Confidence 35555555444444555788886541112222344566778999999887544 2 22333445665 4444443
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 115 QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 115 eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
++...+.+.. +.++++++|.-|.
T Consensus 223 -~~~~~~~~~~----~~g~Dvvid~~g~ 245 (353)
T 4dup_A 223 -DFAAVIKAET----GQGVDIILDMIGA 245 (353)
T ss_dssp -CHHHHHHHHH----SSCEEEEEESCCG
T ss_pred -HHHHHHHHHh----CCCceEEEECCCH
Confidence 3444444433 2468999998764
No 324
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=21.68 E-value=84 Score=31.72 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=28.4
Q ss_pred CCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEee
Q 013345 49 SQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCS 85 (445)
Q Consensus 49 ~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~ 85 (445)
.+||+|+||.-..++-+- .+-...|.++||||.-.=
T Consensus 7 ~~pL~GirVldls~~~aG-P~a~~~LAdlGAdVIKVE 42 (385)
T 4ed9_A 7 NTPLDGLKVVELARILAG-PWVGQTLCDLGADVIKVE 42 (385)
T ss_dssp CCTTTTCEEEECCCTTHH-HHHHHHHHHTTCEEEEEE
T ss_pred CcCCCCCEEEEeCCccHH-HHHHHHHHHcCCcEEEEc
Confidence 579999999988877653 344578899999998654
No 325
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.59 E-value=1.9e+02 Score=26.82 Aligned_cols=88 Identities=13% Similarity=-0.027 Sum_probs=47.8
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~ 128 (445)
.++|.++.+.-=-.-==..+++.|.+.||.|.+++.|+ ..-+++++.+...|..+.... +.+. ++....++++.+.-
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTR-TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35666654322111112356788999999999988654 223445556655565555443 3333 33334444444321
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-.-|
T Consensus 104 --g~iD~lVnnAg 114 (283)
T 3v8b_A 104 --GHLDIVVANAG 114 (283)
T ss_dssp --SCCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 35888887766
No 326
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=21.43 E-value=1.3e+02 Score=28.86 Aligned_cols=109 Identities=7% Similarity=-0.039 Sum_probs=70.7
Q ss_pred cchhHHHHHHHHHhCCCEEEEeecCCCC-ChHHHHHHHHhCCCeE------EEecCCCHHHHHHHHHHHHhcCCCCCCcE
Q 013345 63 MTIQTAVLIETLTALGAEVRWCSCNIFS-TQDHAAAAIARDSASV------FAWKGETLQEYWWCTEKALDWGPGGGPDL 135 (445)
Q Consensus 63 lt~kTa~li~tL~a~GAeV~~~~~np~S-Tqd~vaaaL~~~Gi~V------~A~~g~t~eey~~~~~~~l~~~~~~~p~l 135 (445)
.-+...-+++.|.+.|-.|.++++.+-+ +.+.+...|.+.|++. +-..+. .|-....+.|... +.++
T Consensus 102 ~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~---~~K~~~r~~l~~~---Gy~i 175 (262)
T 3ocu_A 102 AVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK---SAKAARFAEIEKQ---GYEI 175 (262)
T ss_dssp ECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC---SCCHHHHHHHHHT---TEEE
T ss_pred CCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC---CChHHHHHHHHhc---CCCE
Confidence 3455677899999999999999988877 7888889999999984 222221 2222333444321 3566
Q ss_pred EecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCChHHHHHHHHHHhhhcccCCcchh
Q 013345 136 IVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH 193 (445)
Q Consensus 136 ilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 193 (445)
++=.|-++.-+.. .++...+++.+++...+...+.+.=.-.|
T Consensus 176 v~~vGD~~~Dl~~----------------~~~~~~~~~r~a~v~~~~~~fG~~~ivlP 217 (262)
T 3ocu_A 176 VLYVGDNLDDFGN----------------TVYGKLNADRRAFVDQNQGKFGKTFIMLP 217 (262)
T ss_dssp EEEEESSGGGGCS----------------TTTTCCHHHHHHHHHHTGGGBTTTEEECC
T ss_pred EEEECCChHHhcc----------------ccccCCHHHHHHHHHHHHHHhCCCEEEeC
Confidence 7666665543321 23455677888888888877775444334
No 327
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=21.42 E-value=2.8e+02 Score=27.93 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=52.1
Q ss_pred CCCCCcEEEeeeccc---hhHHHHHHHHHh-----CCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe------------
Q 013345 50 QPFKGAKITGSLHMT---IQTAVLIETLTA-----LGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW------------ 109 (445)
Q Consensus 50 kPl~G~rI~~~lHlt---~kTa~li~tL~a-----~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~------------ 109 (445)
+++..+-+++..... .+-.-+++.+.+ .++++++ .+||-+..++..+.|++.|+.-+..
T Consensus 103 ~~i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~~~eiti-e~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~ 181 (457)
T 1olt_A 103 RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISI-EVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRL 181 (457)
T ss_dssp CCEEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEEEEEEEE-EECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHH
T ss_pred CceEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCCCcEEEE-EEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHH
Confidence 456777788776642 345667777766 2477887 6699988899999999998764433
Q ss_pred --cCCCHHHHHHHHHHHHh
Q 013345 110 --KGETLQEYWWCTEKALD 126 (445)
Q Consensus 110 --~g~t~eey~~~~~~~l~ 126 (445)
|+.+.+++.+.++.+.+
T Consensus 182 i~R~~~~~~~~~ai~~~r~ 200 (457)
T 1olt_A 182 VNREQDEEFIFALLNHARE 200 (457)
T ss_dssp HTCCCCHHHHHHHHHHHHH
T ss_pred hCCCCCHHHHHHHHHHHHH
Confidence 34456666666666654
No 328
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=21.41 E-value=2.3e+02 Score=28.65 Aligned_cols=75 Identities=11% Similarity=0.076 Sum_probs=49.6
Q ss_pred CcEEEeeeccchhHHHHHHHHHhCCCEEEEee---cC--------CCCChHHHHHHH---HhCCCe-E-----EEecCCC
Q 013345 54 GAKITGSLHMTIQTAVLIETLTALGAEVRWCS---CN--------IFSTQDHAAAAI---ARDSAS-V-----FAWKGET 113 (445)
Q Consensus 54 G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~---~n--------p~STqd~vaaaL---~~~Gi~-V-----~A~~g~t 113 (445)
+.+|++..+-..=|.-+++.|+++|..-...| .| .-.|-+++..++ .+.|+. | ++..|+|
T Consensus 139 ~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget 218 (457)
T 1olt_A 139 DAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218 (457)
T ss_dssp EEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCC
T ss_pred CcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCC
Confidence 46777777765557778899999996322222 11 122344444444 456776 3 4578999
Q ss_pred HHHHHHHHHHHHhcC
Q 013345 114 LQEYWWCTEKALDWG 128 (445)
Q Consensus 114 ~eey~~~~~~~l~~~ 128 (445)
.+++...++.+.+.+
T Consensus 219 ~e~~~~tl~~~~~l~ 233 (457)
T 1olt_A 219 PESFAFTLKRVAELN 233 (457)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998874
No 329
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=21.33 E-value=4.6e+02 Score=24.38 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=48.7
Q ss_pred CCCCCCcEEEeeecc---------------c-hhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCC
Q 013345 49 SQPFKGAKITGSLHM---------------T-IQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGE 112 (445)
Q Consensus 49 ~kPl~G~rI~~~lHl---------------t-~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~ 112 (445)
.++|+|.++.+.-=- + --=..+++.|.+.||+|.+++.+. +-+. ..|+.+. .-.
T Consensus 3 ~~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~-------~~g~~~~--dv~ 72 (226)
T 1u7z_A 3 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT-------PPFVKRV--DVM 72 (226)
T ss_dssp CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC-------CTTEEEE--ECC
T ss_pred ccCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc-------CCCCeEE--ccC
Confidence 356888887654431 2 233567899999999999875432 2110 2355553 346
Q ss_pred CHHHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 113 TLQEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 113 t~eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
+.+++...+.+.+. +.++++-.-|
T Consensus 73 ~~~~~~~~v~~~~~-----~~Dili~~Aa 96 (226)
T 1u7z_A 73 TALEMEAAVNASVQ-----QQNIFIGCAA 96 (226)
T ss_dssp SHHHHHHHHHHHGG-----GCSEEEECCB
T ss_pred cHHHHHHHHHHhcC-----CCCEEEECCc
Confidence 67887776655543 4688877766
No 330
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=21.33 E-value=3.4e+02 Score=24.03 Aligned_cols=87 Identities=15% Similarity=-0.032 Sum_probs=48.0
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHhcCC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGET-LQEYWWCTEKALDWGP 129 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t-~eey~~~~~~~l~~~~ 129 (445)
.|+|.+|.+.---.-==..+++.|.+.|++|.+++.|+- ..++++..+ ...+.++.. +.+ .++....++++.+.-
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~-~~~~~~~~~-D~~~~~~v~~~~~~~~~~~- 84 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS-GGEAQAKKL-GNNCVFAPA-DVTSEKDVQTALALAKGKF- 84 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS-SHHHHHHHH-CTTEEEEEC-CTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcH-hHHHHHHHh-CCceEEEEc-CCCCHHHHHHHHHHHHHHC-
Confidence 467777654322222224677889999999999988763 334444444 123333332 333 334444444443321
Q ss_pred CCCCcEEecCcch
Q 013345 130 GGGPDLIVDDGGD 142 (445)
Q Consensus 130 ~~~p~lilDDGgd 142 (445)
+++++++-..|-
T Consensus 85 -g~id~li~~Ag~ 96 (265)
T 2o23_A 85 -GRVDVAVNCAGI 96 (265)
T ss_dssp -SCCCEEEECCCC
T ss_pred -CCCCEEEECCcc
Confidence 258888887773
No 331
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=21.32 E-value=32 Score=33.07 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=34.6
Q ss_pred Ccce-ecHHHhhccCCEEEecCCCCCCCCH-----HHHhcCcCCcEEeCCCCCcc
Q 013345 265 GLQV-LTLEDVLSDADIFVTTTGNKDIIMV-----DHMKKMKNNAIVCNIGHFDN 313 (445)
Q Consensus 265 Gf~V-~~l~eA~~~aDifVTaTGn~~vI~~-----eh~~~MKdgAILaN~Ghfd~ 313 (445)
|..+ .+.+++++.+|++|+|+.....+.. +-++.++.|+++.+.+-...
T Consensus 74 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~ 128 (320)
T 4dll_A 74 GATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITP 128 (320)
T ss_dssp TCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCH
T ss_pred CCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCH
Confidence 4444 4689999999999999986432211 23446899999999886543
No 332
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.24 E-value=3.3e+02 Score=25.63 Aligned_cols=37 Identities=19% Similarity=0.039 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe
Q 013345 67 TAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW 109 (445)
Q Consensus 67 Ta~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~ 109 (445)
...|++.|.+.|-+|.+.+. .+....+...|++++..
T Consensus 18 ~~~la~~L~~~GheV~v~~~------~~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 18 MVPLCWALQASGHEVLIAAP------PELQATAHGAGLTTAGI 54 (391)
T ss_dssp THHHHHHHHHTTCEEEEEEC------HHHHHHHHHBTCEEEEC
T ss_pred HHHHHHHHHHCCCEEEEecC------hhhHHHHHhCCCceeee
Confidence 56689999999999999752 34556677789999877
No 333
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=21.22 E-value=2.3e+02 Score=25.03 Aligned_cols=88 Identities=20% Similarity=0.158 Sum_probs=47.4
Q ss_pred CCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcC
Q 013345 51 PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWG 128 (445)
Q Consensus 51 Pl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~ 128 (445)
+|+|.+|.+.-----==..+++.|.+.|++|++++-|+ ...++++..+...|..+...+ +.+ .++....++++.+..
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46777765432111112357788999999999988665 222344555554454444333 223 333333344333221
Q ss_pred CCCCCcEEecCcc
Q 013345 129 PGGGPDLIVDDGG 141 (445)
Q Consensus 129 ~~~~p~lilDDGg 141 (445)
+++++++-..|
T Consensus 87 --~~~d~vi~~Ag 97 (255)
T 1fmc_A 87 --GKVDILVNNAG 97 (255)
T ss_dssp --SSCCEEEECCC
T ss_pred --CCCCEEEECCC
Confidence 25788887766
No 334
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=21.02 E-value=2.5e+02 Score=25.51 Aligned_cols=73 Identities=16% Similarity=0.004 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|.++....-...+.+++.+.+.|..+.... +.+. ++....++++.+.- +++++++-..|-
T Consensus 40 ~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--g~id~li~nAg~ 114 (272)
T 4e3z_A 40 AAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF--GRLDGLVNNAGI 114 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC--CCCCEEEECCCC
Confidence 3567889999999988744332334556666666666655443 3333 33333344443321 257888877663
No 335
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=21.01 E-value=2e+02 Score=29.07 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=47.1
Q ss_pred CCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe
Q 013345 53 KGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW 109 (445)
Q Consensus 53 ~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~ 109 (445)
+|-||++++.-.++..+.+-....+||-+. .-||..+.++++..|...+..++-.
T Consensus 74 ~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v--pl~~~~~~~~l~~~l~~~~~~~vi~ 128 (550)
T 3rix_A 74 TNHRIVVCSENSLQFFMPVLGALFIGVAVA--PANDIYNERELLNSMNISQPTVVFV 128 (550)
T ss_dssp TTCEEEEECSSCTTTHHHHHHHHHHTCEEE--ECCTTCCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHcCCEEe--ecCCcCCHHHHHHHHHhcCCeEEEE
Confidence 699999999999999999999999999443 4589999999999998888876544
No 336
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=21.00 E-value=4.9e+02 Score=25.63 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=55.0
Q ss_pred hChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec--CC
Q 013345 35 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK--GE 112 (445)
Q Consensus 35 ~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~--g~ 112 (445)
-.|++.++++++ ++-|++- |.+..++-+.|.+ ||.+.=.- +-+. .++.+...++.|++|..-+ |.
T Consensus 93 v~pvI~~l~~~~-------~vpISID---T~~~~Va~aAl~a-Ga~iINDV-sg~~-~~~m~~v~a~~g~~vVlMh~~G~ 159 (314)
T 3tr9_A 93 LLPVIDAIKKRF-------PQLISVD---TSRPRVMREAVNT-GADMINDQ-RALQ-LDDALTTVSALKTPVCLMHFPSE 159 (314)
T ss_dssp HHHHHHHHHHHC-------CSEEEEE---CSCHHHHHHHHHH-TCCEEEET-TTTC-STTHHHHHHHHTCCEEEECCCCT
T ss_pred HHHHHHHHHhhC-------CCeEEEe---CCCHHHHHHHHHc-CCCEEEEC-CCCC-chHHHHHHHHhCCeEEEECCCCC
Confidence 468898888763 4455544 5677777777776 89876211 1122 4566666677888877543 32
Q ss_pred --C-------------HHHHHHHHHHHHhcCCCCCC-cEEecCcch
Q 013345 113 --T-------------LQEYWWCTEKALDWGPGGGP-DLIVDDGGD 142 (445)
Q Consensus 113 --t-------------~eey~~~~~~~l~~~~~~~p-~lilDDGgd 142 (445)
| .+.+.+.++++.+. |-.+ ++|||=|--
T Consensus 160 P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~--GI~~~~IilDPG~G 203 (314)
T 3tr9_A 160 TRKPGSTTHFYFLQSVKKELQESIQRCKKA--GISEDRIIIDPGFG 203 (314)
T ss_dssp TCCTTSSCHHHHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCCC
T ss_pred CcccccccccchHHHHHHHHHHHHHHHHHc--CCCHhHEEEeCCCC
Confidence 1 22333444555543 2222 799999853
No 337
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=20.90 E-value=60 Score=32.82 Aligned_cols=53 Identities=8% Similarity=0.114 Sum_probs=34.7
Q ss_pred cEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCC-------Ch--HHHHHHHHhCCCeEEEec
Q 013345 55 AKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS-------TQ--DHAAAAIARDSASVFAWK 110 (445)
Q Consensus 55 ~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~S-------Tq--d~vaaaL~~~Gi~V~A~~ 110 (445)
.||..|+=+|.++ ++.-.+.||+..++-=.++- +. ......|.+.||.||+.+
T Consensus 41 ~~Vl~alD~t~~V---v~eAi~~~adlIItHHPlif~~~k~i~~~~~~r~i~~li~~~Ialya~H 102 (370)
T 2nyd_A 41 TGVLTALDCTLEV---VNEAIEKGYNTIISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMH 102 (370)
T ss_dssp CCEEEESSCCHHH---HHHHHHHTCCEEEESSCSSCSCCSCCCSSTHHHHHHHHHHTTCEEEECC
T ss_pred CEEEEEEcCCHHH---HHHHHHCCCCEEEECCCcccCCccccCcCCHHHHHHHHHHCCCeEEEee
Confidence 3677777665443 34456788999887643321 11 456666778899999986
No 338
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=20.84 E-value=4.3e+02 Score=24.98 Aligned_cols=91 Identities=16% Similarity=-0.006 Sum_probs=50.0
Q ss_pred hhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCC-EEEEeecCCCCChHHHHHHHHhCCCe-EEEecCCCH
Q 013345 37 PGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGA-EVRWCSCNIFSTQDHAAAAIARDSAS-VFAWKGETL 114 (445)
Q Consensus 37 P~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GA-eV~~~~~np~STqd~vaaaL~~~Gi~-V~A~~g~t~ 114 (445)
|+.-++..- ...+. +|.+|.+.-- -.==...++.+++.|| +|..+..++ +-.+.+.+.|.. ++..+.+
T Consensus 153 ~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~-----~~~~~~~~~Ga~~~~~~~~~-- 222 (348)
T 2d8a_A 153 PLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD-----FRRELAKKVGADYVINPFEE-- 222 (348)
T ss_dssp HHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH-----HHHHHHHHHTCSEEECTTTS--
T ss_pred HHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHhCCCEEECCCCc--
Confidence 444443333 34455 8999876554 3322344566778999 998876542 223333455765 4444333
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEecCcc
Q 013345 115 QEYWWCTEKALDWGPGGGPDLIVDDGG 141 (445)
Q Consensus 115 eey~~~~~~~l~~~~~~~p~lilDDGg 141 (445)
++...+.+.. ++.+.++++|.-|
T Consensus 223 -~~~~~v~~~~---~g~g~D~vid~~g 245 (348)
T 2d8a_A 223 -DVVKEVMDIT---DGNGVDVFLEFSG 245 (348)
T ss_dssp -CHHHHHHHHT---TTSCEEEEEECSC
T ss_pred -CHHHHHHHHc---CCCCCCEEEECCC
Confidence 3333343332 2236899999865
No 339
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=20.75 E-value=2.6e+02 Score=25.28 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=49.9
Q ss_pred CCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEec-CCCHH-HHHHHHHHHHhc
Q 013345 50 QPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK-GETLQ-EYWWCTEKALDW 127 (445)
Q Consensus 50 kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~-g~t~e-ey~~~~~~~l~~ 127 (445)
..++|.++.+.-=-.-==..+++.|.+.|++|.+++-|+ ..-+.++..+.+.|..+.... +.+.. +....++++.+.
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV-EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 346777765432212222356788899999999988665 223445556666665554443 33333 333333333322
Q ss_pred CCCCCCcEEecCcch
Q 013345 128 GPGGGPDLIVDDGGD 142 (445)
Q Consensus 128 ~~~~~p~lilDDGgd 142 (445)
- +++++++-..|-
T Consensus 104 ~--g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 H--GRCDVLVNNAGV 116 (262)
T ss_dssp H--SCCSEEEECCCC
T ss_pred c--CCCCEEEECCCc
Confidence 1 357888877663
No 340
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=20.70 E-value=1.3e+02 Score=29.69 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=39.3
Q ss_pred cce-ecHHHhhccCCEEEecC----CC------------CCCCCHHHHhcCcCCcEEeCCCCCc-cccccc
Q 013345 266 LQV-LTLEDVLSDADIFVTTT----GN------------KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDML 318 (445)
Q Consensus 266 f~V-~~l~eA~~~aDifVTaT----Gn------------~~vI~~eh~~~MKdgAILaN~Ghfd-~EId~~ 318 (445)
+.+ ..+++|++.+|+++|-| |. .=.|+.+-|+.+|.++|+.-.+=-. +||+-+
T Consensus 211 ~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP~~r~EI~~e 281 (321)
T 1oth_A 211 LLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPRKPEEVDDE 281 (321)
T ss_dssp EEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCCCTTTBCHH
T ss_pred EEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCCCCCcccCHH
Confidence 443 35999999999999954 52 1347888899999999998887642 677733
No 341
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=20.70 E-value=3.7e+02 Score=24.43 Aligned_cols=70 Identities=14% Similarity=0.055 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHh-CC-CeEEEecCCCH-HHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 68 AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAR-DS-ASVFAWKGETL-QEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 68 a~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~-~G-i~V~A~~g~t~-eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
..+++.|.+.|++|.+++-|+- .++.+..+.+ .| +.++.. +.+. ++....++++.+.- +++++++-..|-
T Consensus 22 ~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~l~~~~~~~~~~~~-D~~~~~~v~~~~~~~~~~~--g~id~lv~nAg~ 94 (275)
T 2pd4_A 22 YGIAQSCFNQGATLAFTYLNES--LEKRVRPIAQELNSPYVYEL-DVSKEEHFKSLYNSVKKDL--GSLDFIVHSVAF 94 (275)
T ss_dssp HHHHHHHHTTTCEEEEEESSTT--THHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHHHHT--SCEEEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEc-CCCCHHHHHHHHHHHHHHc--CCCCEEEECCcc
Confidence 3567888999999999988772 3445555643 23 444433 4443 34444444444432 357888888773
No 342
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=20.46 E-value=2.5e+02 Score=29.06 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=43.8
Q ss_pred CCCCCCCcEEEeeeccc----hhHHHHHHHHHhCCCEEE----------EeecCCCCChHHHHHHHHhCCCeEEEecCCC
Q 013345 48 PSQPFKGAKITGSLHMT----IQTAVLIETLTALGAEVR----------WCSCNIFSTQDHAAAAIARDSASVFAWKGET 113 (445)
Q Consensus 48 ~~kPl~G~rI~~~lHlt----~kTa~li~tL~a~GAeV~----------~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t 113 (445)
+.+||+|++|..+--+. ++...+.+.....||.+. +|+ ++- | .-+-.|....||+|+ +
T Consensus 349 k~~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~~vs~~vTHLVa~-~~~-t-~K~~~A~~~g~IkIV-----s 420 (442)
T 3ef1_A 349 KQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAA-KIR-T-EKVKKAVSMGNIKVV-----K 420 (442)
T ss_dssp HHTTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECSSSSSCCSEEEEC-SCC-C-HHHHHHHHHSSSEEE-----E
T ss_pred hhcccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeCCCCCCceEEEeC-CCC-C-HHHHHHHhcCCCEEE-----e
Confidence 45699999999887553 244788899999999985 232 222 2 345555554479887 3
Q ss_pred HHHHHHHHH
Q 013345 114 LQEYWWCTE 122 (445)
Q Consensus 114 ~eey~~~~~ 122 (445)
++-.++|+.
T Consensus 421 ~~WL~dcl~ 429 (442)
T 3ef1_A 421 LNWLTESLS 429 (442)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 343
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=20.40 E-value=2.5e+02 Score=24.52 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=48.7
Q ss_pred hHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEecCCCHHHH
Q 013345 38 GLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEY 117 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~~g~t~eey 117 (445)
.+..+|+.+. ++..|+.....++++ ++...+.||+.. .+.+ .+ .++.....+.|+++++ -..|.+|
T Consensus 51 ~i~~ir~~~~-----~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~--~~-~~~~~~~~~~g~~vi~-g~~t~~e- 116 (205)
T 1wa3_A 51 VIKELSFLKE-----KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPH--LD-EEISQFCKEKGVFYMP-GVMTPTE- 116 (205)
T ss_dssp HHHHTHHHHH-----TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSS--CC-HHHHHHHHHHTCEEEC-EECSHHH-
T ss_pred HHHHHHHHCC-----CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCC--CC-HHHHHHHHHcCCcEEC-CcCCHHH-
Confidence 3666777763 245676645456665 455567899988 4433 22 6688888888999986 3346665
Q ss_pred HHHHHHHHhcCCCCCCcEE
Q 013345 118 WWCTEKALDWGPGGGPDLI 136 (445)
Q Consensus 118 ~~~~~~~l~~~~~~~p~li 136 (445)
+.++++. +.++|
T Consensus 117 ---~~~a~~~----Gad~v 128 (205)
T 1wa3_A 117 ---LVKAMKL----GHTIL 128 (205)
T ss_dssp ---HHHHHHT----TCCEE
T ss_pred ---HHHHHHc----CCCEE
Confidence 3455554 35554
No 344
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=20.35 E-value=2.8e+02 Score=24.31 Aligned_cols=71 Identities=14% Similarity=0.154 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCEEEEe-ecCCCCChHHHHHHHHhCCCeEEEec-CCC-HHHHHHHHHHHHhcCCCCCCcEEecCcch
Q 013345 69 VLIETLTALGAEVRWC-SCNIFSTQDHAAAAIARDSASVFAWK-GET-LQEYWWCTEKALDWGPGGGPDLIVDDGGD 142 (445)
Q Consensus 69 ~li~tL~a~GAeV~~~-~~np~STqd~vaaaL~~~Gi~V~A~~-g~t-~eey~~~~~~~l~~~~~~~p~lilDDGgd 142 (445)
.+++.|.+.|++|.++ .-++ +..++++..+...|-.+..+. +.+ .++....++++.+.- +++++++-..|-
T Consensus 16 ~la~~l~~~G~~v~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~li~~Ag~ 89 (244)
T 1edo_A 16 AIALSLGKAGCKVLVNYARSA-KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW--GTIDVVVNNAGI 89 (244)
T ss_dssp HHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS--SCCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc--CCCCEEEECCCC
Confidence 5678889999999885 4332 222344445544454554443 333 334444444444321 357888887763
No 345
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=20.33 E-value=1e+02 Score=30.73 Aligned_cols=78 Identities=9% Similarity=0.019 Sum_probs=51.0
Q ss_pred hHHHHHHHhCCCCCCCCcEEEeeec---c-----chhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhC-CCeEEE
Q 013345 38 GLMACRAEFGPSQPFKGAKITGSLH---M-----TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD-SASVFA 108 (445)
Q Consensus 38 ~L~~l~~~~~~~kPl~G~rI~~~lH---l-----t~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~-Gi~V~A 108 (445)
++.++|+....+ |+ |+||+..-. + ..++..+++.|.+.|++..-.+... + ..+.++.+++. ++||++
T Consensus 217 vv~aVr~~vg~~-~v-~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~-~~~~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 217 VVDAAIDVWSAA-RV-GVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-G-GDAIGQQLKAAFGGPFIV 292 (361)
T ss_dssp HHHHHHHHHCGG-GE-EEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-S-TTCCHHHHHHHHCSCEEE
T ss_pred HHHHHHHHcCCC-eE-EEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-C-CHHHHHHHHHHcCCCEEE
Confidence 566778888765 54 788875321 1 2356789999999999876554322 1 22456666543 889998
Q ss_pred ecCCCHHHHHH
Q 013345 109 WKGETLQEYWW 119 (445)
Q Consensus 109 ~~g~t~eey~~ 119 (445)
--|-|.++...
T Consensus 293 ~Ggit~e~a~~ 303 (361)
T 3gka_A 293 NENFTLDSAQA 303 (361)
T ss_dssp ESSCCHHHHHH
T ss_pred eCCCCHHHHHH
Confidence 88877766433
No 346
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=20.21 E-value=4.7e+02 Score=25.35 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=49.3
Q ss_pred HHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCC---CCChHHHHHHHHhCCCeEEEecC
Q 013345 43 RAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNI---FSTQDHAAAAIARDSASVFAWKG 111 (445)
Q Consensus 43 ~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np---~STqd~vaaaL~~~Gi~V~A~~g 111 (445)
...+.+.. .+|-||++++.-.++..+.+-....+||-++-. || ..+.+++...|...+..+.-...
T Consensus 72 A~~L~~~g-~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl--~~~~~~~~~~~l~~il~~~~~~~vi~~~ 140 (480)
T 3t5a_A 72 AQELSRCG-STGDRVVISAPQGLEYVVAFLGALQAGRIAVPL--SVPQGGVTDERSDSVLSDSSPVAILTTS 140 (480)
T ss_dssp HHHHTTSS-CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEE--CSCCSCTTCCHHHHHHHHHCCSEEEECT
T ss_pred HHHHHhcC-CCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEee--CCCCccchHHHHHHHHHhCCCCEEEeCh
Confidence 33344434 489999999999999999999999999955433 55 44677888888877887765543
No 347
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=20.08 E-value=2e+02 Score=28.09 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=45.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCChHHHHHHHHhCCCeEEEe
Q 013345 39 LMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAW 109 (445)
Q Consensus 39 L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STqd~vaaaL~~~Gi~V~A~ 109 (445)
.+.+.++|. .+|+|.++.+.-.=..==..++..|...||.|.+|.++ | .+...++.++-|-|-|-
T Consensus 147 v~~lL~~~~--i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~---t-~~L~~~~~~ADIVI~Av 211 (285)
T 3p2o_A 147 VMKLLKAYE--IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---T-KDLSLYTRQADLIIVAA 211 (285)
T ss_dssp HHHHHHHTT--CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---C-SCHHHHHTTCSEEEECS
T ss_pred HHHHHHHhC--CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---c-hhHHHHhhcCCEEEECC
Confidence 566777764 67999999887754443445667788899999988653 3 34677777777755443
No 348
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=20.07 E-value=48 Score=30.08 Aligned_cols=22 Identities=27% Similarity=0.300 Sum_probs=20.2
Q ss_pred ecCCCCChHHHHHHHHhCCCeE
Q 013345 85 SCNIFSTQDHAAAAIARDSASV 106 (445)
Q Consensus 85 ~~np~STqd~vaaaL~~~Gi~V 106 (445)
..|+++||++.+.+|.+.|+.|
T Consensus 30 ~~~~I~tQeEL~~~L~~~Gi~v 51 (170)
T 3lap_A 30 SSAQVRSQNELAALLAAEGIEV 51 (170)
T ss_dssp HHSCCCSHHHHHHHHHHTTCCC
T ss_pred HhCCCCCHHHHHHHHHHcCCCc
Confidence 4588999999999999999998
Done!