Query 013348
Match_columns 444
No_of_seqs 163 out of 442
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:53:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.8 2.3E-20 8E-25 195.6 16.1 147 2-192 311-477 (496)
2 3kya_A Putative phosphatase; s 99.8 5.3E-18 1.8E-22 177.8 16.4 191 1-240 247-476 (496)
3 4hw6_A Hypothetical protein, I 99.8 3.1E-18 1.1E-22 174.0 13.1 139 3-189 275-432 (433)
4 4hw6_A Hypothetical protein, I 99.7 2E-17 6.9E-22 168.0 16.1 176 1-237 228-431 (433)
5 3hrp_A Uncharacterized protein 99.7 6.6E-17 2.2E-21 161.9 17.5 139 3-189 268-409 (409)
6 3tc9_A Hypothetical hydrolase; 99.7 1.9E-16 6.5E-21 160.2 17.2 176 1-237 226-428 (430)
7 3tc9_A Hypothetical hydrolase; 99.7 7.7E-17 2.6E-21 163.1 12.5 140 2-189 271-429 (430)
8 3hrp_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 149.4 19.4 178 2-237 220-408 (409)
9 3fvz_A Peptidyl-glycine alpha- 99.7 6E-15 2E-19 140.5 19.8 180 2-243 92-281 (329)
10 3p5b_L Low density lipoprotein 99.6 7.8E-15 2.7E-19 146.9 18.4 177 2-260 160-343 (400)
11 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-14 4.9E-19 137.9 19.3 175 2-243 25-231 (329)
12 3m0c_C LDL receptor, low-densi 99.6 9.4E-15 3.2E-19 160.2 20.4 178 2-261 472-656 (791)
13 3v65_B Low-density lipoprotein 99.6 3.3E-14 1.1E-18 141.3 18.1 175 2-260 160-341 (386)
14 3sov_A LRP-6, low-density lipo 99.6 7.2E-14 2.5E-18 136.3 19.6 175 2-260 80-261 (318)
15 1ijq_A LDL receptor, low-densi 99.6 1.3E-13 4.3E-18 132.9 20.8 177 2-260 78-261 (316)
16 3v64_C Agrin; beta propeller, 99.6 9.1E-14 3.1E-18 136.3 19.4 175 2-260 117-298 (349)
17 1npe_A Nidogen, entactin; glyc 99.5 5.3E-13 1.8E-17 122.9 20.2 162 2-248 80-247 (267)
18 4a0p_A LRP6, LRP-6, low-densit 99.5 4.7E-13 1.6E-17 142.7 18.9 173 2-260 81-260 (628)
19 3v65_B Low-density lipoprotein 99.5 1.5E-12 5E-17 129.5 19.0 181 2-269 117-306 (386)
20 3s94_A LRP-6, low-density lipo 99.5 1.1E-12 3.9E-17 139.4 19.1 157 2-242 393-554 (619)
21 3s94_A LRP-6, low-density lipo 99.5 1E-12 3.4E-17 139.8 17.7 175 2-260 85-266 (619)
22 3v64_C Agrin; beta propeller, 99.4 3.6E-12 1.2E-16 125.0 18.9 182 2-270 74-264 (349)
23 3p5b_L Low density lipoprotein 99.4 3.8E-12 1.3E-16 127.4 18.8 183 2-270 113-309 (400)
24 1n7d_A LDL receptor, low-densi 99.4 3.7E-13 1.3E-17 144.7 11.6 177 2-260 454-637 (699)
25 1npe_A Nidogen, entactin; glyc 99.4 3.3E-12 1.1E-16 117.5 16.3 120 2-197 123-246 (267)
26 1ijq_A LDL receptor, low-densi 99.4 7E-12 2.4E-16 120.7 18.4 153 2-238 31-194 (316)
27 4a0p_A LRP6, LRP-6, low-densit 99.4 7.1E-12 2.4E-16 133.6 18.6 158 2-243 390-553 (628)
28 3m0c_C LDL receptor, low-densi 99.4 8.3E-12 2.9E-16 137.0 18.6 122 2-196 515-639 (791)
29 3sov_A LRP-6, low-density lipo 99.4 1E-11 3.6E-16 121.0 15.3 120 2-196 123-245 (318)
30 2p4o_A Hypothetical protein; p 99.3 7.7E-11 2.6E-15 111.5 19.8 191 2-272 33-232 (306)
31 2fp8_A Strictosidine synthase; 99.2 8.6E-11 2.9E-15 111.2 14.9 117 2-191 81-217 (322)
32 1q7f_A NHL, brain tumor CG1071 99.2 6.1E-10 2.1E-14 101.8 19.9 159 2-242 78-240 (286)
33 1q7f_A NHL, brain tumor CG1071 99.2 4.1E-10 1.4E-14 102.9 18.2 161 2-241 31-195 (286)
34 1rwi_B Serine/threonine-protei 99.2 1.2E-10 3.9E-15 104.9 13.4 153 2-238 109-263 (270)
35 1rwi_B Serine/threonine-protei 99.2 2.3E-10 7.9E-15 102.9 14.7 155 2-242 25-183 (270)
36 2p4o_A Hypothetical protein; p 99.2 8.3E-10 2.8E-14 104.5 17.9 168 2-243 73-245 (306)
37 1n7d_A LDL receptor, low-densi 99.1 9.6E-11 3.3E-15 126.0 11.0 121 2-195 497-619 (699)
38 2z2n_A Virginiamycin B lyase; 99.1 2E-09 7E-14 97.0 17.7 155 2-241 142-297 (299)
39 2fp8_A Strictosidine synthase; 99.1 1.2E-09 4.2E-14 103.3 17.0 152 2-238 127-312 (322)
40 2qc5_A Streptogramin B lactona 99.1 2.3E-09 7.8E-14 96.7 17.3 119 2-197 147-266 (300)
41 2qc5_A Streptogramin B lactona 99.1 2.5E-09 8.4E-14 96.5 17.1 157 2-243 21-179 (300)
42 2z2n_A Virginiamycin B lyase; 99.1 7E-09 2.4E-13 93.5 17.5 156 2-242 100-257 (299)
43 3e5z_A Putative gluconolactona 99.0 3.3E-08 1.1E-12 91.2 21.9 160 2-243 70-249 (296)
44 3e5z_A Putative gluconolactona 99.0 8.7E-09 3E-13 95.1 17.5 158 2-242 29-206 (296)
45 2qe8_A Uncharacterized protein 99.0 8.7E-09 3E-13 99.0 18.2 85 2-116 68-162 (343)
46 3dsm_A Uncharacterized protein 98.9 9.5E-08 3.2E-12 91.4 21.2 162 2-243 45-216 (328)
47 3dr2_A Exported gluconolactona 98.9 3.6E-08 1.2E-12 92.5 17.8 120 2-194 87-228 (305)
48 3dsm_A Uncharacterized protein 98.9 3.3E-08 1.1E-12 94.5 16.4 160 2-248 132-310 (328)
49 3dr2_A Exported gluconolactona 98.9 1E-07 3.5E-12 89.4 19.1 157 2-241 46-226 (305)
50 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 1E-07 3.5E-12 87.3 18.0 166 2-243 72-260 (314)
51 3g4e_A Regucalcin; six bladed 98.9 9.5E-08 3.2E-12 89.5 17.3 162 3-244 56-234 (297)
52 2qe8_A Uncharacterized protein 98.8 8.3E-08 2.8E-12 92.1 16.2 128 2-196 18-160 (343)
53 3vgz_A Uncharacterized protein 98.8 1.4E-06 4.7E-11 80.4 22.4 177 2-247 90-270 (353)
54 3g4e_A Regucalcin; six bladed 98.8 6.3E-07 2.1E-11 83.9 20.1 155 2-242 14-185 (297)
55 2dg1_A DRP35, lactonase; beta 98.7 5.6E-07 1.9E-11 83.7 17.4 122 2-196 88-221 (333)
56 2iwa_A Glutamine cyclotransfer 98.7 9.6E-07 3.3E-11 85.7 19.1 163 2-247 22-189 (266)
57 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 2.6E-07 9E-12 84.5 13.7 119 2-190 173-299 (314)
58 2dg1_A DRP35, lactonase; beta 98.6 1.2E-06 4.2E-11 81.4 15.6 121 2-196 46-177 (333)
59 1jof_A Carboxy-CIS,CIS-muconat 98.5 7.4E-06 2.5E-10 78.5 20.4 81 2-112 146-230 (365)
60 3hfq_A Uncharacterized protein 98.5 1.7E-06 5.9E-11 80.9 15.4 136 2-196 87-226 (347)
61 3vgz_A Uncharacterized protein 98.5 3.2E-06 1.1E-10 77.9 16.7 122 2-195 186-308 (353)
62 3mbr_X Glutamine cyclotransfer 98.5 1.2E-05 4.2E-10 77.3 20.7 161 4-249 24-189 (243)
63 2ism_A Putative oxidoreductase 98.5 1.1E-06 3.7E-11 86.4 13.1 79 2-108 76-178 (352)
64 3u4y_A Uncharacterized protein 98.5 2.9E-06 1E-10 78.1 15.0 129 2-196 177-310 (331)
65 3hfq_A Uncharacterized protein 98.5 1.4E-05 4.7E-10 74.8 19.5 186 2-257 142-338 (347)
66 3nok_A Glutaminyl cyclase; bet 98.5 3.6E-06 1.2E-10 82.4 16.1 159 4-248 58-219 (268)
67 3u4y_A Uncharacterized protein 98.5 5E-06 1.7E-10 76.5 16.2 124 2-197 129-259 (331)
68 2p9w_A MAL S 1 allergenic prot 98.4 6.6E-06 2.3E-10 82.8 17.2 215 2-278 14-261 (334)
69 3scy_A Hypothetical bacterial 98.4 5E-06 1.7E-10 78.4 15.2 128 2-196 212-345 (361)
70 3mbr_X Glutamine cyclotransfer 98.4 1E-05 3.5E-10 77.9 17.5 159 4-239 68-235 (243)
71 3scy_A Hypothetical bacterial 98.4 1.9E-05 6.4E-10 74.4 18.5 174 2-243 156-343 (361)
72 3nol_A Glutamine cyclotransfer 98.3 2.3E-05 7.7E-10 76.4 17.4 160 4-248 46-210 (262)
73 2iwa_A Glutamine cyclotransfer 98.3 1.5E-05 5.2E-10 77.3 15.6 160 3-240 68-238 (266)
74 2ism_A Putative oxidoreductase 98.3 5.8E-06 2E-10 81.1 12.8 97 1-109 202-298 (352)
75 3nol_A Glutamine cyclotransfer 98.3 2E-05 6.7E-10 76.9 16.3 157 4-237 90-254 (262)
76 3nok_A Glutaminyl cyclase; bet 98.3 1.8E-05 6.2E-10 77.5 15.6 156 4-236 99-263 (268)
77 2p9w_A MAL S 1 allergenic prot 98.3 5.6E-06 1.9E-10 83.4 12.2 132 2-190 64-215 (334)
78 1l0q_A Surface layer protein; 98.2 0.00013 4.5E-09 68.7 20.7 120 2-196 33-153 (391)
79 1l0q_A Surface layer protein; 98.2 5.6E-05 1.9E-09 71.2 18.1 119 2-195 75-194 (391)
80 1ri6_A Putative isomerase YBHE 98.2 8.8E-05 3E-09 67.6 18.5 125 2-196 39-167 (343)
81 3a9g_A Putative uncharacterize 98.2 1.4E-05 4.7E-10 78.9 14.2 75 2-109 30-115 (354)
82 3a9g_A Putative uncharacterize 98.2 2.1E-05 7.3E-10 77.5 15.2 77 2-108 74-178 (354)
83 2ghs_A AGR_C_1268P; regucalcin 98.2 2E-05 6.7E-10 75.2 14.1 85 2-115 180-267 (326)
84 1pby_B Quinohemoprotein amine 98.2 5.1E-05 1.8E-09 68.9 15.6 83 2-113 35-129 (337)
85 3sre_A PON1, serum paraoxonase 98.2 1.2E-05 4E-10 81.0 12.1 121 2-195 113-258 (355)
86 2ghs_A AGR_C_1268P; regucalcin 98.2 3.4E-05 1.2E-09 73.5 14.7 73 77-191 133-213 (326)
87 1ri6_A Putative isomerase YBHE 98.1 0.00012 4.2E-09 66.6 17.5 145 2-212 179-330 (343)
88 3no2_A Uncharacterized protein 98.1 7.6E-05 2.6E-09 70.5 16.4 79 77-197 124-203 (276)
89 3no2_A Uncharacterized protein 98.1 7E-05 2.4E-09 70.8 15.4 135 2-210 126-271 (276)
90 2g8s_A Glucose/sorbosone dehyd 98.1 4.7E-05 1.6E-09 74.9 14.4 78 2-108 67-173 (353)
91 1jmx_B Amine dehydrogenase; ox 98.0 0.00017 5.8E-09 66.0 15.3 77 3-113 2-79 (349)
92 1pby_B Quinohemoprotein amine 97.9 0.00066 2.2E-08 61.6 18.3 76 2-115 83-170 (337)
93 1jof_A Carboxy-CIS,CIS-muconat 97.9 0.00023 7.9E-09 68.1 14.6 138 2-194 194-345 (365)
94 3bws_A Protein LP49; two-domai 97.9 0.00052 1.8E-08 65.5 16.9 113 2-189 304-431 (433)
95 3bws_A Protein LP49; two-domai 97.8 0.00066 2.3E-08 64.8 16.8 119 2-195 213-339 (433)
96 1cru_A Protein (soluble quinop 97.8 0.00017 5.7E-09 74.0 12.9 80 2-108 28-123 (454)
97 2g8s_A Glucose/sorbosone dehyd 97.8 0.00023 7.7E-09 70.0 13.2 79 1-109 18-108 (353)
98 1nir_A Nitrite reductase; hemo 97.7 0.0016 5.6E-08 67.4 19.2 169 2-246 180-362 (543)
99 3c75_H MADH, methylamine dehyd 97.7 0.00029 9.9E-09 72.3 12.4 80 2-112 120-213 (426)
100 1jmx_B Amine dehydrogenase; ox 97.7 0.00029 1E-08 64.5 11.0 82 2-111 44-137 (349)
101 3qqz_A Putative uncharacterize 97.6 0.0017 6E-08 62.4 16.2 179 2-220 28-233 (255)
102 3das_A Putative oxidoreductase 97.6 0.00054 1.9E-08 68.7 12.8 78 2-108 33-116 (347)
103 3c75_H MADH, methylamine dehyd 97.5 0.00077 2.6E-08 69.2 13.6 121 10-200 82-220 (426)
104 2mad_H Methylamine dehydrogena 97.5 0.002 7E-08 63.6 15.9 81 2-112 68-160 (373)
105 3sjl_D Methylamine dehydrogena 97.5 0.00078 2.7E-08 68.6 12.9 123 8-200 40-180 (386)
106 3sjl_D Methylamine dehydrogena 97.5 0.0009 3.1E-08 68.1 12.7 84 2-115 80-177 (386)
107 1nir_A Nitrite reductase; hemo 97.5 0.0071 2.4E-07 62.6 19.6 129 2-195 223-360 (543)
108 1mda_H Methylamine dehydrogena 97.4 0.00035 1.2E-08 70.1 9.3 83 2-115 67-163 (368)
109 3qqz_A Putative uncharacterize 97.4 0.0014 4.6E-08 63.2 11.9 81 2-109 174-254 (255)
110 4a9v_A PHOX; hydrolase, beta-p 97.3 0.002 6.7E-08 69.4 13.3 42 75-116 473-526 (592)
111 1qks_A Cytochrome CD1 nitrite 97.3 0.0053 1.8E-07 64.7 16.4 75 2-113 198-280 (567)
112 3sre_A PON1, serum paraoxonase 97.2 0.0011 3.6E-08 66.8 9.8 73 2-107 222-297 (355)
113 2mad_H Methylamine dehydrogena 97.2 0.0016 5.6E-08 64.3 11.0 76 2-113 265-355 (373)
114 2oiz_A Aromatic amine dehydrog 97.0 0.0022 7.4E-08 62.3 8.8 82 2-113 52-145 (361)
115 3s25_A Hypothetical 7-bladed b 96.9 0.014 4.9E-07 56.6 13.7 108 7-196 59-182 (302)
116 1cru_A Protein (soluble quinop 96.8 0.0019 6.5E-08 66.2 7.7 39 77-115 26-64 (454)
117 3s25_A Hypothetical 7-bladed b 96.7 0.016 5.6E-07 56.2 13.0 112 5-197 108-223 (302)
118 1fwx_A Nitrous oxide reductase 96.6 0.014 4.9E-07 62.8 12.4 84 2-108 278-361 (595)
119 3das_A Putative oxidoreductase 96.6 0.0054 1.8E-07 61.5 8.6 84 77-190 31-116 (347)
120 2hqs_A Protein TOLB; TOLB, PAL 96.6 0.08 2.7E-06 52.0 16.8 37 80-116 225-264 (415)
121 1mda_H Methylamine dehydrogena 96.5 0.0044 1.5E-07 62.2 7.6 76 2-112 262-350 (368)
122 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.074 2.5E-06 52.3 15.8 36 80-115 269-307 (415)
123 2oiz_A Aromatic amine dehydrog 96.4 0.013 4.4E-07 56.8 9.9 69 3-109 253-335 (361)
124 3zwu_A Alkaline phosphatase PH 96.4 0.025 8.5E-07 60.8 12.6 52 74-126 472-535 (592)
125 3azo_A Aminopeptidase; POP fam 96.0 0.44 1.5E-05 48.6 18.9 87 3-116 244-333 (662)
126 1qks_A Cytochrome CD1 nitrite 95.9 0.072 2.5E-06 56.1 13.0 108 12-193 166-278 (567)
127 2ece_A 462AA long hypothetical 95.8 0.039 1.3E-06 57.8 10.5 90 2-112 322-430 (462)
128 2ojh_A Uncharacterized protein 95.7 0.31 1.1E-05 42.4 14.6 37 80-116 87-127 (297)
129 2ojh_A Uncharacterized protein 95.7 0.51 1.8E-05 41.0 15.9 38 79-116 174-214 (297)
130 3q7m_A Lipoprotein YFGL, BAMB; 95.6 1.5 5.2E-05 41.3 21.0 168 12-253 53-221 (376)
131 3pe7_A Oligogalacturonate lyas 95.6 0.28 9.6E-06 45.8 14.8 34 5-39 85-118 (388)
132 3amr_A 3-phytase; beta-propell 95.4 0.22 7.6E-06 50.4 14.0 73 1-107 128-209 (355)
133 2ecf_A Dipeptidyl peptidase IV 95.3 0.25 8.6E-06 51.0 14.5 75 3-116 111-189 (741)
134 3azo_A Aminopeptidase; POP fam 95.3 0.24 8.4E-06 50.4 14.2 79 4-116 191-282 (662)
135 2z3z_A Dipeptidyl aminopeptida 95.2 0.48 1.7E-05 48.7 16.3 85 3-117 260-353 (706)
136 2ecf_A Dipeptidyl peptidase IV 95.2 0.26 8.8E-06 50.9 14.0 99 2-116 38-149 (741)
137 1gxr_A ESG1, transducin-like e 95.1 0.86 2.9E-05 40.8 15.6 36 80-115 227-262 (337)
138 3q7m_A Lipoprotein YFGL, BAMB; 95.0 0.67 2.3E-05 43.8 15.4 72 81-195 271-342 (376)
139 2ece_A 462AA long hypothetical 94.9 0.11 3.7E-06 54.4 10.5 75 10-113 93-178 (462)
140 2aq5_A Coronin-1A; WD40 repeat 94.8 2.8 9.6E-05 39.7 21.0 124 80-254 223-356 (402)
141 1gxr_A ESG1, transducin-like e 94.5 2.1 7.3E-05 38.2 16.6 35 80-114 186-220 (337)
142 3q6k_A 43.2 kDa salivary prote 94.1 0.39 1.3E-05 48.9 11.9 95 75-197 84-197 (381)
143 3zwl_B Eukaryotic translation 94.0 2.7 9.3E-05 37.9 16.4 77 3-115 35-112 (369)
144 2z3z_A Dipeptidyl aminopeptida 94.0 0.96 3.3E-05 46.5 14.8 36 80-115 260-301 (706)
145 1pgu_A Actin interacting prote 93.6 4.9 0.00017 39.4 18.5 78 4-113 164-243 (615)
146 3v9f_A Two-component system se 93.6 1 3.4E-05 47.8 14.5 79 79-198 540-619 (781)
147 3hxj_A Pyrrolo-quinoline quino 93.4 1.9 6.6E-05 39.0 14.4 34 78-112 215-248 (330)
148 3o4h_A Acylamino-acid-releasin 93.4 0.36 1.2E-05 48.7 10.3 36 81-116 153-192 (582)
149 2ymu_A WD-40 repeat protein; u 93.3 3.4 0.00012 40.6 16.9 37 80-116 470-506 (577)
150 3zwl_B Eukaryotic translation 93.2 4.5 0.00015 36.4 16.4 78 2-115 177-256 (369)
151 3pe7_A Oligogalacturonate lyas 93.2 1.1 3.9E-05 41.6 12.7 34 82-115 242-280 (388)
152 2vdu_B TRNA (guanine-N(7)-)-me 93.1 0.75 2.6E-05 44.7 11.7 32 80-111 198-232 (450)
153 3c5m_A Oligogalacturonate lyas 93.0 1.7 6E-05 40.1 13.5 20 97-116 318-337 (396)
154 4e54_B DNA damage-binding prot 92.9 1 3.5E-05 43.7 12.4 79 4-114 168-246 (435)
155 3mmy_A MRNA export factor; mRN 92.9 3.1 0.0001 37.5 14.8 78 4-116 43-125 (368)
156 4a2l_A BT_4663, two-component 92.9 2 6.9E-05 45.6 15.5 77 79-197 544-621 (795)
157 3c5m_A Oligogalacturonate lyas 92.8 4.2 0.00014 37.5 15.9 36 80-115 240-280 (396)
158 1sq9_A Antiviral protein SKI8; 92.7 2 6.7E-05 39.9 13.5 88 3-112 236-326 (397)
159 3ei3_B DNA damage-binding prot 92.6 3.6 0.00012 38.3 15.3 80 4-115 122-201 (383)
160 4gqb_B Methylosome protein 50; 92.6 3 0.0001 39.8 15.1 36 80-115 217-254 (344)
161 2ymu_A WD-40 repeat protein; u 92.5 4.5 0.00015 39.8 16.5 37 80-116 306-342 (577)
162 3v9f_A Two-component system se 92.5 1.4 4.7E-05 46.8 13.6 80 78-197 495-575 (781)
163 1fwx_A Nitrous oxide reductase 92.4 1.1 3.6E-05 48.4 12.7 26 11-36 100-125 (595)
164 3o4h_A Acylamino-acid-releasin 92.3 0.98 3.4E-05 45.5 11.7 74 4-112 153-231 (582)
165 1erj_A Transcriptional repress 92.3 3.6 0.00012 39.3 15.2 74 4-113 127-201 (393)
166 3amr_A 3-phytase; beta-propell 92.3 0.76 2.6E-05 46.6 10.8 72 2-107 181-262 (355)
167 3q6k_A 43.2 kDa salivary prote 92.3 0.39 1.3E-05 48.9 8.7 62 5-99 279-345 (381)
168 3ow8_A WD repeat-containing pr 92.1 5 0.00017 37.4 15.6 74 4-113 168-242 (321)
169 2vdu_B TRNA (guanine-N(7)-)-me 91.6 3.4 0.00012 40.1 14.3 76 3-111 105-183 (450)
170 1k32_A Tricorn protease; prote 91.6 4.6 0.00016 44.4 16.8 75 3-115 298-375 (1045)
171 2gop_A Trilobed protease; beta 91.4 2.2 7.6E-05 39.1 12.1 33 82-116 175-215 (347)
172 1k8k_C P40, ARP2/3 complex 41 91.3 2.1 7.2E-05 39.1 11.7 73 4-112 12-87 (372)
173 3i2n_A WD repeat-containing pr 91.2 4.1 0.00014 36.8 13.5 75 3-110 21-101 (357)
174 3hxj_A Pyrrolo-quinoline quino 91.2 8.4 0.00029 34.8 17.2 64 170-245 225-289 (330)
175 2ad6_A Methanol dehydrogenase 91.1 2.7 9.1E-05 43.9 13.7 77 12-113 62-139 (571)
176 1erj_A Transcriptional repress 90.8 6.2 0.00021 37.6 15.1 93 4-115 68-161 (393)
177 1k32_A Tricorn protease; prote 90.8 2.1 7.1E-05 47.1 13.1 39 78-116 379-417 (1045)
178 1r5m_A SIR4-interacting protei 90.7 5.3 0.00018 36.8 13.9 77 3-115 111-187 (425)
179 1sq9_A Antiviral protein SKI8; 90.6 7 0.00024 36.1 14.8 79 3-113 189-272 (397)
180 3iuj_A Prolyl endopeptidase; h 90.5 5.8 0.0002 41.7 15.8 76 5-115 238-324 (693)
181 3f3f_A Nucleoporin SEH1; struc 90.2 6.1 0.00021 34.8 13.4 71 4-110 15-92 (351)
182 3ott_A Two-component system se 90.1 3.3 0.00011 43.7 13.6 120 4-198 475-594 (758)
183 1kb0_A Quinohemoprotein alcoho 90.1 2.1 7.2E-05 45.6 12.1 77 12-114 77-153 (677)
184 4gqb_B Methylosome protein 50; 90.0 3.3 0.00011 39.6 12.3 78 3-115 217-296 (344)
185 1tl2_A L10, protein (tachylect 89.9 0.4 1.4E-05 46.3 5.7 67 3-108 43-116 (236)
186 4ery_A WD repeat-containing pr 89.8 11 0.00038 34.0 16.4 74 4-113 27-101 (312)
187 1yr2_A Prolyl oligopeptidase; 89.7 5.3 0.00018 42.1 14.8 78 4-116 271-360 (741)
188 4a2l_A BT_4663, two-component 89.7 4.4 0.00015 43.0 14.1 80 78-197 498-578 (795)
189 4ery_A WD repeat-containing pr 89.6 10 0.00034 34.2 14.7 32 81-112 111-142 (312)
190 2aq5_A Coronin-1A; WD40 repeat 89.5 7 0.00024 36.9 14.1 32 81-112 180-211 (402)
191 4e54_B DNA damage-binding prot 89.4 2.9 9.8E-05 40.5 11.5 80 4-116 123-204 (435)
192 4aez_A CDC20, WD repeat-contai 89.4 8.7 0.0003 36.4 14.7 76 4-114 263-342 (401)
193 2ynn_A Coatomer subunit beta'; 89.3 13 0.00043 34.0 15.4 74 3-112 16-90 (304)
194 2xyi_A Probable histone-bindin 89.3 3 0.0001 40.4 11.6 71 3-108 234-309 (430)
195 3ei3_B DNA damage-binding prot 89.3 14 0.00047 34.3 18.5 29 80-108 207-236 (383)
196 1xfd_A DIP, dipeptidyl aminope 89.2 1.5 5.2E-05 44.9 9.9 81 2-115 18-107 (723)
197 3mkq_A Coatomer beta'-subunit; 89.0 12 0.00043 38.4 16.5 30 80-109 100-129 (814)
198 2bkl_A Prolyl endopeptidase; m 88.6 2.9 9.9E-05 43.7 11.6 80 4-116 171-269 (695)
199 1yfq_A Cell cycle arrest prote 88.6 2.2 7.7E-05 38.5 9.5 77 3-115 14-96 (342)
200 3mmy_A MRNA export factor; mRN 88.6 13 0.00046 33.3 15.7 72 4-111 90-163 (368)
201 4g56_B MGC81050 protein; prote 88.5 2.2 7.4E-05 40.6 9.8 32 79-110 228-260 (357)
202 2bkl_A Prolyl endopeptidase; m 88.1 7.6 0.00026 40.5 14.4 75 5-115 231-314 (695)
203 4g56_B MGC81050 protein; prote 87.4 5 0.00017 38.0 11.6 78 3-115 229-308 (357)
204 3sfz_A APAF-1, apoptotic pepti 87.4 15 0.00051 40.4 16.7 75 4-114 619-694 (1249)
205 3mkq_A Coatomer beta'-subunit; 87.3 14 0.00049 38.0 15.7 75 3-113 16-91 (814)
206 2ad6_A Methanol dehydrogenase 87.2 23 0.00079 36.8 17.5 42 167-210 472-514 (571)
207 1got_B GT-beta; complex (GTP-b 87.2 16 0.00053 34.0 14.6 32 80-111 229-260 (340)
208 3ow8_A WD repeat-containing pr 87.1 19 0.00065 33.4 18.0 34 80-113 167-200 (321)
209 3dw8_B Serine/threonine-protei 86.9 7.8 0.00027 36.5 12.5 84 3-110 229-318 (447)
210 2pm9_A Protein WEB1, protein t 86.7 4.6 0.00016 37.5 10.7 34 79-112 264-298 (416)
211 2xyi_A Probable histone-bindin 86.3 7.7 0.00026 37.5 12.4 82 3-109 131-214 (430)
212 2xdw_A Prolyl endopeptidase; a 86.2 10 0.00035 39.5 14.1 31 4-34 174-219 (710)
213 1r5m_A SIR4-interacting protei 86.0 16 0.00056 33.4 13.9 87 3-115 48-146 (425)
214 3gre_A Serine/threonine-protei 85.6 13 0.00045 35.1 13.5 93 87-195 271-364 (437)
215 1vyh_C Platelet-activating fac 85.6 26 0.0009 33.6 17.3 76 4-115 196-272 (410)
216 4a5s_A Dipeptidyl peptidase 4 85.4 6.3 0.00022 41.4 12.1 81 4-116 20-109 (740)
217 4a11_B DNA excision repair pro 85.2 9.9 0.00034 34.8 12.0 35 78-112 246-280 (408)
218 3k26_A Polycomb protein EED; W 85.2 21 0.00071 32.1 14.0 77 4-115 73-154 (366)
219 1pgu_A Actin interacting prote 85.1 9.8 0.00034 37.3 12.6 36 78-113 489-524 (615)
220 1flg_A Protein (quinoprotein e 84.9 5.8 0.0002 41.6 11.5 74 12-113 68-141 (582)
221 3lrv_A PRE-mRNA-splicing facto 84.8 13 0.00044 34.4 12.7 32 80-111 173-204 (343)
222 1kv9_A Type II quinohemoprotei 84.5 17 0.00059 38.4 15.1 76 12-113 66-141 (668)
223 1vyh_C Platelet-activating fac 84.4 11 0.00039 36.2 12.5 72 4-111 112-184 (410)
224 1kv9_A Type II quinohemoprotei 84.1 25 0.00085 37.2 16.0 44 166-211 465-509 (668)
225 3k26_A Polycomb protein EED; W 83.9 16 0.00055 32.8 12.6 80 4-113 22-109 (366)
226 2wg3_C Hedgehog-interacting pr 83.9 0.76 2.6E-05 47.4 4.2 30 77-107 13-44 (463)
227 2wg3_C Hedgehog-interacting pr 83.6 2.5 8.5E-05 43.6 7.9 29 77-105 335-370 (463)
228 1k8k_C P40, ARP2/3 complex 41 83.5 25 0.00087 31.8 16.3 31 80-110 99-129 (372)
229 3vl1_A 26S proteasome regulato 83.5 23 0.00079 33.0 13.9 96 4-111 185-281 (420)
230 2oit_A Nucleoporin 214KDA; NH2 83.4 6.9 0.00024 38.8 10.8 85 3-110 95-183 (434)
231 1nr0_A Actin interacting prote 83.0 31 0.0011 35.2 15.7 34 79-112 241-274 (611)
232 1got_B GT-beta; complex (GTP-b 83.0 9.9 0.00034 35.3 11.1 33 80-112 273-305 (340)
233 4aez_A CDC20, WD repeat-contai 82.9 5.9 0.0002 37.6 9.7 32 80-111 352-383 (401)
234 4a9v_A PHOX; hydrolase, beta-p 82.9 2.3 8E-05 45.8 7.5 62 1-96 476-550 (592)
235 3odt_A Protein DOA1; ubiquitin 82.8 15 0.0005 32.3 11.7 34 80-114 228-261 (313)
236 2gop_A Trilobed protease; beta 82.8 4.7 0.00016 36.8 8.7 18 98-115 151-169 (347)
237 2j04_A TAU60, YPL007P, hypothe 82.1 12 0.0004 40.3 12.6 74 4-111 133-214 (588)
238 3iz6_a 40S ribosomal protein R 81.9 35 0.0012 32.2 15.6 35 80-114 252-286 (380)
239 1w6s_A Methanol dehydrogenase 81.2 24 0.00081 37.4 14.5 77 12-113 62-145 (599)
240 3dwl_C Actin-related protein 2 81.1 11 0.00038 34.7 10.6 31 80-110 103-133 (377)
241 1z68_A Fibroblast activation p 81.0 5.4 0.00019 41.0 9.3 76 3-111 18-102 (719)
242 4a11_B DNA excision repair pro 81.0 17 0.00057 33.3 11.7 74 3-111 102-178 (408)
243 3vl1_A 26S proteasome regulato 80.9 34 0.0012 31.8 14.0 32 80-111 142-173 (420)
244 4a5s_A Dipeptidyl peptidase 4 80.8 5.5 0.00019 41.9 9.4 38 81-118 322-363 (740)
245 3iz6_a 40S ribosomal protein R 80.6 39 0.0013 31.9 16.7 80 4-112 253-333 (380)
246 2pbi_B Guanine nucleotide-bind 79.9 13 0.00043 35.1 10.8 34 79-112 286-319 (354)
247 3jrp_A Fusion protein of prote 79.6 24 0.00081 31.9 12.2 72 4-111 15-91 (379)
248 4h5i_A Guanine nucleotide-exch 78.8 9.2 0.00032 36.4 9.5 70 4-109 273-344 (365)
249 3frx_A Guanine nucleotide-bind 78.7 40 0.0014 30.9 18.2 76 5-116 70-146 (319)
250 3i2n_A WD repeat-containing pr 78.7 9.7 0.00033 34.2 9.2 31 85-115 176-206 (357)
251 2pm9_A Protein WEB1, protein t 78.7 14 0.00048 34.2 10.5 36 79-114 167-203 (416)
252 1xfd_A DIP, dipeptidyl aminope 78.3 6.5 0.00022 40.2 8.8 79 3-115 63-150 (723)
253 3iuj_A Prolyl endopeptidase; h 77.5 30 0.001 36.2 13.8 35 82-116 238-278 (693)
254 1yr2_A Prolyl oligopeptidase; 77.5 30 0.001 36.4 13.8 36 81-116 271-314 (741)
255 3dw8_B Serine/threonine-protei 77.3 11 0.00038 35.4 9.5 92 3-116 288-381 (447)
256 1nr0_A Actin interacting prote 77.0 68 0.0023 32.6 19.1 33 80-112 193-225 (611)
257 3dm0_A Maltose-binding peripla 76.0 23 0.00079 36.5 12.3 32 80-111 564-595 (694)
258 3gre_A Serine/threonine-protei 75.8 54 0.0018 30.9 15.1 69 10-112 180-249 (437)
259 3vu4_A KMHSV2; beta-propeller 75.6 53 0.0018 30.7 14.6 33 80-112 198-231 (355)
260 2xdw_A Prolyl endopeptidase; a 75.5 80 0.0027 32.8 16.4 29 4-32 236-268 (710)
261 2ynn_A Coatomer subunit beta'; 75.3 48 0.0016 30.1 13.8 29 81-109 101-129 (304)
262 4gq1_A NUP37; propeller, trans 75.1 52 0.0018 31.3 13.7 99 3-111 189-289 (393)
263 3dwl_C Actin-related protein 2 75.1 16 0.00053 33.7 9.7 71 4-110 15-88 (377)
264 1yiq_A Quinohemoprotein alcoho 75.0 8.2 0.00028 41.1 8.8 25 87-112 485-509 (689)
265 3vu4_A KMHSV2; beta-propeller 74.7 23 0.00077 33.3 10.9 71 4-109 199-272 (355)
266 3v7d_B Cell division control p 74.7 59 0.002 30.9 13.9 32 81-112 314-345 (464)
267 3odt_A Protein DOA1; ubiquitin 74.3 44 0.0015 29.2 13.2 34 79-113 186-219 (313)
268 1tl2_A L10, protein (tachylect 74.2 29 0.00098 33.4 11.4 106 79-221 42-152 (236)
269 1yiq_A Quinohemoprotein alcoho 73.8 41 0.0014 35.7 13.8 125 88-247 70-200 (689)
270 3sfz_A APAF-1, apoptotic pepti 72.5 24 0.00084 38.7 11.9 35 81-115 1007-1041(1249)
271 3zwu_A Alkaline phosphatase PH 72.2 7.1 0.00024 41.9 7.4 34 76-109 382-437 (592)
272 3jrp_A Fusion protein of prote 72.1 56 0.0019 29.4 13.6 30 80-109 104-135 (379)
273 1w6s_A Methanol dehydrogenase 72.0 82 0.0028 33.3 15.5 127 88-249 62-201 (599)
274 2oaj_A Protein SNI1; WD40 repe 71.2 89 0.0031 34.1 16.0 72 3-111 20-91 (902)
275 2j04_A TAU60, YPL007P, hypothe 70.7 1.1E+02 0.0036 33.0 16.0 75 3-110 88-162 (588)
276 4aow_A Guanine nucleotide-bind 69.4 13 0.00046 33.2 7.6 30 81-110 310-339 (340)
277 4ggc_A P55CDC, cell division c 68.6 33 0.0011 30.2 9.9 28 81-108 288-315 (318)
278 1z68_A Fibroblast activation p 68.2 20 0.00069 36.8 9.6 35 82-116 316-354 (719)
279 3sbq_A Nitrous-oxide reductase 68.1 9.3 0.00032 41.6 7.2 86 1-108 323-408 (638)
280 4aow_A Guanine nucleotide-bind 67.6 67 0.0023 28.5 15.2 33 81-113 219-251 (340)
281 1yfq_A Cell cycle arrest prote 67.4 21 0.0007 32.0 8.4 34 79-112 253-286 (342)
282 4h5i_A Guanine nucleotide-exch 67.1 36 0.0012 32.3 10.5 72 4-111 137-209 (365)
283 3v7d_B Cell division control p 67.1 87 0.003 29.7 15.4 28 82-111 357-384 (464)
284 3lrv_A PRE-mRNA-splicing facto 66.0 16 0.00056 33.7 7.7 30 80-110 217-246 (343)
285 3dm0_A Maltose-binding peripla 65.7 1.3E+02 0.0043 31.0 16.1 32 81-112 434-465 (694)
286 1kb0_A Quinohemoprotein alcoho 64.8 29 0.001 36.8 10.3 83 5-112 247-350 (677)
287 3fm0_A Protein CIAO1; WDR39,SG 64.1 68 0.0023 29.7 11.6 74 4-111 20-95 (345)
288 4ggc_A P55CDC, cell division c 64.0 75 0.0026 27.8 15.6 73 5-113 30-103 (318)
289 2hz6_A Endoplasmic reticulum t 61.9 13 0.00044 35.9 6.4 67 5-111 4-71 (369)
290 3jro_A Fusion protein of prote 60.7 93 0.0032 32.8 13.2 73 4-112 13-90 (753)
291 3fm0_A Protein CIAO1; WDR39,SG 60.3 1.1E+02 0.0036 28.4 13.3 31 80-110 108-138 (345)
292 2pm7_B Protein transport prote 58.5 1E+02 0.0036 27.7 12.5 71 4-110 13-88 (297)
293 3bg1_A Protein SEC13 homolog; 56.7 84 0.0029 28.7 10.7 71 4-110 17-92 (316)
294 1flg_A Protein (quinoprotein e 56.5 65 0.0022 33.6 11.0 69 180-260 465-534 (582)
295 2hz6_A Endoplasmic reticulum t 55.9 17 0.0006 35.0 6.1 106 88-244 9-116 (369)
296 2pbi_B Guanine nucleotide-bind 55.2 1.3E+02 0.0046 27.9 18.4 74 4-113 158-234 (354)
297 3f3f_A Nucleoporin SEH1; struc 54.5 48 0.0016 29.0 8.3 31 80-110 113-145 (351)
298 3s9j_A Member of DUF4221 famil 54.3 44 0.0015 33.6 9.0 73 13-114 40-116 (369)
299 2xe4_A Oligopeptidase B; hydro 53.8 1.3E+02 0.0046 31.9 13.1 25 89-113 331-360 (751)
300 3jro_A Fusion protein of prote 52.7 89 0.003 32.9 11.4 30 80-109 102-133 (753)
301 2oit_A Nucleoporin 214KDA; NH2 52.7 27 0.00093 34.5 7.1 73 3-110 152-224 (434)
302 4gga_A P55CDC, cell division c 51.1 83 0.0028 29.9 10.0 29 81-109 368-396 (420)
303 4gga_A P55CDC, cell division c 50.7 1.7E+02 0.0057 27.7 15.6 72 6-113 111-183 (420)
304 1p22_A F-BOX/WD-repeat protein 49.6 1.8E+02 0.006 27.6 17.1 69 7-113 138-207 (435)
305 2xzm_R RACK1; ribosome, transl 49.1 1.6E+02 0.0054 27.0 16.5 32 81-112 122-153 (343)
306 2w18_A PALB2, fancn, partner a 45.6 2.5E+02 0.0085 28.2 14.3 28 14-41 194-222 (356)
307 2hes_X YDR267CP; beta-propelle 43.0 1.2E+02 0.0042 27.7 9.5 29 81-109 157-185 (330)
308 3frx_A Guanine nucleotide-bind 41.4 2.1E+02 0.007 26.0 18.5 25 89-113 166-190 (319)
309 2xe4_A Oligopeptidase B; hydro 36.9 2E+02 0.0067 30.6 11.1 28 82-109 275-305 (751)
310 3lyw_A YBBR family protein; st 35.5 15 0.0005 30.4 1.6 23 236-258 51-73 (90)
311 2j04_B YDR362CP, TAU91; beta p 34.5 62 0.0021 33.2 6.5 70 4-109 359-429 (524)
312 3ott_A Two-component system se 34.1 1E+02 0.0034 32.4 8.2 34 78-114 559-592 (758)
313 2be1_A Serine/threonine-protei 34.0 2.2E+02 0.0076 28.0 10.3 83 170-253 55-144 (339)
314 2xzm_R RACK1; ribosome, transl 33.7 2.8E+02 0.0095 25.3 17.2 19 90-108 185-203 (343)
315 2oaj_A Protein SNI1; WD40 repe 33.6 5E+02 0.017 28.2 16.9 79 4-112 579-668 (902)
316 1k3i_A Galactose oxidase precu 33.6 4E+02 0.014 27.4 12.6 34 82-115 247-281 (656)
317 2w18_A PALB2, fancn, partner a 30.8 94 0.0032 31.3 7.0 31 86-116 190-221 (356)
318 2hes_X YDR267CP; beta-propelle 30.8 3.1E+02 0.011 25.0 13.9 28 80-107 110-137 (330)
319 1p22_A F-BOX/WD-repeat protein 29.5 1.7E+02 0.0057 27.8 8.3 30 86-115 140-169 (435)
320 4gq1_A NUP37; propeller, trans 29.4 2.5E+02 0.0085 26.5 9.5 28 88-115 155-183 (393)
321 3s9j_A Member of DUF4221 famil 27.9 2.9E+02 0.0099 27.6 10.0 77 90-202 41-122 (369)
322 2ovr_B FBW7, F-BOX/WD repeat p 24.5 4.5E+02 0.015 24.7 18.8 158 4-240 283-443 (445)
323 2kps_A Uncharacterized protein 23.1 33 0.0011 28.1 1.7 23 237-259 55-77 (98)
324 2j04_B YDR362CP, TAU91; beta p 22.5 1.4E+02 0.0049 30.4 6.7 37 80-116 358-395 (524)
325 1xip_A Nucleoporin NUP159; bet 22.3 2.2E+02 0.0077 28.4 7.9 27 3-33 90-116 (388)
326 2vpj_A Kelch-like protein 12; 20.7 4.5E+02 0.015 23.4 20.7 28 88-115 159-191 (301)
327 2pm7_B Protein transport prote 20.2 3.5E+02 0.012 24.1 8.2 28 80-107 257-284 (297)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2.3e-20 Score=195.59 Aligned_cols=147 Identities=14% Similarity=0.118 Sum_probs=107.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEC--CCCeE---EEeccC-CCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADM--GRRVL---ETVYPT-SGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl--~tg~V---tTVAGt-G~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
.|.+||++++|+.|||||+.||+|||+++ .++.+ +|+||+ |.. ||. +|++..|+
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~--------G~~---DG~~~~a~--------- 370 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQS--------GYR---DDVGTEAR--------- 370 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBC--------CCB---CCBGGGCB---------
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCC--------ccc---CCcccccc---------
Confidence 48899999999889999999999999775 45565 799998 544 333 47888888
Q ss_pred CCCCcc-eeEEc-------CCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccc----eeecceehhhhhhhhhcCCccc
Q 013348 76 SLIFPW-HLMKS-------EDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKV----LEICGVLVMEKVFLLKQMPQDW 143 (444)
Q Consensus 76 ~Ln~P~-gL~~d-------~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~----~~~~G~li~~~~a~l~~~~~~~ 143 (444)
|++|+ +++++ .+|+|||||++||+||+|++ +|.|+|++|..... ...+|.
T Consensus 371 -f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~---------------- 432 (496)
T 3kya_A 371 -MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGT---------------- 432 (496)
T ss_dssp -CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCC----------------
T ss_pred -cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCcccccc----------------
Confidence 99999 88887 56899999999999999995 69999999732210 000010
Q ss_pred ccccccccccccCCCccccccccccc--CCeEEEEeCCCCeEEEEeCCCCe
Q 013348 144 LLHQIDSSCSLKELPYAGLISSSIAF--QNHILLCDIVGQRIMRLNRESGV 192 (444)
Q Consensus 144 ~~~~~~~~~~~~Gip~a~~~Sgla~~--~~~LyIADT~nhRIRkvdl~tG~ 192 (444)
. ++. +...+....|.+|+.. ++.|||||+.||||||++++...
T Consensus 433 ~----dG~--~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 433 D----DGD--LREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp C----CEE--TTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred C----CCC--chhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 0 000 0011112236677765 37999999999999999987543
No 2
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=5.3e-18 Score=177.77 Aligned_cols=191 Identities=12% Similarity=-0.013 Sum_probs=129.2
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECC-------CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCC
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMG-------RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLD 73 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-------tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~ 73 (444)
.+|.|+++|++++.|||+|.++++|.|+|+. ++.+.|-...... + . + .. ......
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~---g--~--~--~~--l~~~~~------- 308 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP---N--T--F--KQ--LFTIAD------- 308 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT---T--T--E--EE--EEECSS-------
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc---c--c--c--ce--eEecCC-------
Confidence 3799999999778999999999999999997 6766332111000 0 0 0 00 000001
Q ss_pred CCCCCCcceeEEcCCCe-EEEEeCCCCEEEEEEC--CCCcE---EEeecCCccceeecceehhhhhhhhhcCCccccccc
Q 013348 74 PQSLIFPWHLMKSEDDN-LLIINRSFETLWIMDL--ASGEI---KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQ 147 (444)
Q Consensus 74 ~~~Ln~P~gL~~d~dG~-LYIADagnh~IrkIDl--~tG~I---~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~ 147 (444)
-..|.+|+++++|+ |||||+++|+||++|+ .++.+ ++++|......-.+|. +.
T Consensus 309 ---~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~------~~------------ 367 (496)
T 3kya_A 309 ---PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDV------GT------------ 367 (496)
T ss_dssp ---SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCB------GG------------
T ss_pred ---CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCc------cc------------
Confidence 34588999999987 9999999999999765 44555 6777621110000110 00
Q ss_pred ccccccccCCCcccccc-cccc--------cCCeEEEEeCCCCeEEEEeCCCCeEEEeeecc--------------cccc
Q 013348 148 IDSSCSLKELPYAGLIS-SSIA--------FQNHILLCDIVGQRIMRLNRESGVCSNFQFSN--------------FAIL 204 (444)
Q Consensus 148 ~~~~~~~~Gip~a~~~S-gla~--------~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg--------------~g~l 204 (444)
.+. ...|. +++. ..++|||||+.|||||+++ .+|.++||.-.+ .|.+
T Consensus 368 ----~a~-----f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 368 ----EAR-----MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp ----GCB-----CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred ----ccc-----cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCc
Confidence 001 11234 3444 3579999999999999999 578999996442 2346
Q ss_pred CCceeeeeccceeeec--c-cccCCcccceeeeeecCCC
Q 013348 205 GLPYWFAFPLERVYAV--A-GGHQGSWTDHIQRCSLLPG 240 (444)
Q Consensus 205 g~P~~l~~PL~~v~~~--~-~~~~g~~~~~i~~v~~~pG 240 (444)
...+.|+.|..++++. + .+++|+.||+||+|++...
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 7788999999999986 3 5679999999999987544
No 3
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.76 E-value=3.1e-18 Score=173.95 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=103.0
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECC--CC---eEEEeccC-CCcCccCCcchhhhhcccCcccccCccccCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMG--RR---VLETVYPT-SGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQS 76 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg---~VtTVAGt-G~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~ 76 (444)
|.+|+++++++.|||+|+.||+|+++++. ++ .+.+++|. |.. +|. +|++..+.
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~--------g~~---dg~~~~a~---------- 333 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSP--------GWV---DGMGTGAR---------- 333 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCC--------CCB---CEEGGGSB----------
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCC--------ccC---CCcccceE----------
Confidence 56899999998899999999999999865 44 35689987 533 332 46666666
Q ss_pred CCCcceeEE---------cCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCcc--ceeecceehhhhhhhhhcCCccccc
Q 013348 77 LIFPWHLMK---------SEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSK--VLEICGVLVMEKVFLLKQMPQDWLL 145 (444)
Q Consensus 77 Ln~P~gL~~---------d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~--~~~~~G~li~~~~a~l~~~~~~~~~ 145 (444)
|++|+++++ +.+|+|||||++||+||++++ +|.+++++|.... ....+|.+ +
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~-----~----------- 396 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGEL-----R----------- 396 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEET-----T-----------
T ss_pred EcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCcc-----c-----------
Confidence 999999999 888999999999999999997 6999999963210 00001100 0
Q ss_pred ccccccccccCCCccccccccccc--CCeEEEEeCCCCeEEEEeCC
Q 013348 146 HQIDSSCSLKELPYAGLISSSIAF--QNHILLCDIVGQRIMRLNRE 189 (444)
Q Consensus 146 ~~~~~~~~~~Gip~a~~~Sgla~~--~~~LyIADT~nhRIRkvdl~ 189 (444)
..+....|.+|+.. ++.|||||+.|||||||+++
T Consensus 397 ----------~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 397 ----------SQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ----------TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ----------cccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 00011225566655 78999999999999999875
No 4
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.74 E-value=2e-17 Score=167.99 Aligned_cols=176 Identities=13% Similarity=0.056 Sum_probs=124.6
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.+|.|+++|+.++.|||+|..||+|+++|+.+|.+ +++...+. ...
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---------------------------------~~~ 274 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT---------------------------------KGS 274 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---------------------------------CSS
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---------------------------------CCC
Confidence 37999999995568999999999999999988888 55543321 112
Q ss_pred cceeEEcCCCe-EEEEeCCCCEEEEEECC--CCc---EEEeecCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 80 PWHLMKSEDDN-LLIINRSFETLWIMDLA--SGE---IKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagnh~IrkIDl~--tG~---I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
|.+|+++++|+ |||+|+++|+|++++++ ++. +.++++......-..|. + ...
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~------~----------------~~a 332 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGM------G----------------TGA 332 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEE------G----------------GGS
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCc------c----------------cce
Confidence 45799999886 99999999999998865 454 34666521110000010 0 000
Q ss_pred ccCCCcccccccccc----------cCCeEEEEeCCCCeEEEEeCCCCeEEEeeecc--------ccccCCceeeeeccc
Q 013348 154 LKELPYAGLISSSIA----------FQNHILLCDIVGQRIMRLNRESGVCSNFQFSN--------FAILGLPYWFAFPLE 215 (444)
Q Consensus 154 ~~Gip~a~~~Sgla~----------~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg--------~g~lg~P~~l~~PL~ 215 (444)
. ...|.+++. ..++|||||+.|||||+++. +|.++++.-.+ .|.+...+.|+.|..
T Consensus 333 ~-----~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~g 406 (433)
T 4hw6_A 333 R-----LWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTS 406 (433)
T ss_dssp B-----CSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEE
T ss_pred E-----EcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcE
Confidence 0 111344443 56789999999999999996 68898885332 234667788999999
Q ss_pred eeee--cc-cccCCcccceeeeeec
Q 013348 216 RVYA--VA-GGHQGSWTDHIQRCSL 237 (444)
Q Consensus 216 ~v~~--~~-~~~~g~~~~~i~~v~~ 237 (444)
++++ .+ .+++|+.+|+||++++
T Consensus 407 iavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 407 IAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCEEEEEec
Confidence 9998 33 5579999999999975
No 5
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=6.6e-17 Score=161.86 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=103.7
Q ss_pred cc-eEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PA-ASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~-GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
|. ||+++++++.|||+|+.||+|+++++ ++.+.+++|.+.. . +| .+|++..+. |+.|.
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~-~g~~~~~~g~~~~--~-----g~---~dg~~~~~~----------~~~P~ 326 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITP-DGECEWFCGSATQ--K-----TV---QDGLREEAL----------FAQPN 326 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECTTC--C-----SC---BCEEGGGCB----------CSSEE
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEec-CCCEEEEEeCCCC--C-----Cc---CCCcccccE----------eCCCe
Confidence 77 99999977799999999999999996 5669999998622 0 22 245666666 99999
Q ss_pred eeEEcCCCeEEEEeC-CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDDNLLIINR-SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG~LYIADa-gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+|+++++|+|||||+ ++|+|+++|+.+|.++++++.........|. . ..+..
T Consensus 327 gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~----------------------~-----~~~~~ 379 (409)
T 3hrp_A 327 GMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGT----------------------P-----LEATF 379 (409)
T ss_dssp EEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBS----------------------T-----TTCCB
T ss_pred EEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCC----------------------h-----hceEe
Confidence 999999999999999 9999999998899999999631110000000 0 00011
Q ss_pred ccccccccc-CCeEEEEeCCCCeEEEEeCC
Q 013348 161 GLISSSIAF-QNHILLCDIVGQRIMRLNRE 189 (444)
Q Consensus 161 ~~~Sgla~~-~~~LyIADT~nhRIRkvdl~ 189 (444)
..|.+++.. .+.|||||..||||||++++
T Consensus 380 ~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 380 NYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp SSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 224555544 48999999999999999863
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.9e-16 Score=160.24 Aligned_cols=176 Identities=14% Similarity=0.036 Sum_probs=125.5
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.+|.|+++|++++.|||+|..+|+|+++++.++.+.++...+ . ...|
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-----------------------~----------~~~P 272 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-----------------------D----------SGWE 272 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-----------------------S----------SSCC
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-----------------------C----------CCcc
Confidence 379999999955689999999999999999887775553221 1 3468
Q ss_pred ceeEEcCCCe-EEEEeCCCCEEEEEECCC--Cc---EEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccc
Q 013348 81 WHLMKSEDDN-LLIINRSFETLWIMDLAS--GE---IKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSL 154 (444)
Q Consensus 81 ~gL~~d~dG~-LYIADagnh~IrkIDl~t--G~---I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~ 154 (444)
.+|+++++|+ |||+|..+|+|++++.+. +. +.++++......-..|. + ....
T Consensus 273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~------~----------------~~a~ 330 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGV------G----------------KKAR 330 (430)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEE------G----------------GGCB
T ss_pred eeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCC------C----------------cceE
Confidence 9999999987 999999999999988753 33 45666521110000010 0 0000
Q ss_pred cCCCcccccc-cccc---------cCCeEEEEeCCCCeEEEEeCCCCeEEEeeec------c--ccccCCceeeeeccce
Q 013348 155 KELPYAGLIS-SSIA---------FQNHILLCDIVGQRIMRLNRESGVCSNFQFS------N--FAILGLPYWFAFPLER 216 (444)
Q Consensus 155 ~Gip~a~~~S-gla~---------~~~~LyIADT~nhRIRkvdl~tG~vST~~fs------g--~g~lg~P~~l~~PL~~ 216 (444)
...|. +++. ..++|||||+.||||++++ .+|.++++.-. | .|.+..+..|+.|.++
T Consensus 331 -----~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~gi 404 (430)
T 3tc9_A 331 -----MHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGI 404 (430)
T ss_dssp -----BSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEE
T ss_pred -----eCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEE
Confidence 01133 3443 3479999999999999999 46888888643 2 3346677889999999
Q ss_pred eeec--c-cccCCcccceeeeeec
Q 013348 217 VYAV--A-GGHQGSWTDHIQRCSL 237 (444)
Q Consensus 217 v~~~--~-~~~~g~~~~~i~~v~~ 237 (444)
+++. + .+++++.+|+|+++++
T Consensus 405 avd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 405 VYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEcc
Confidence 9985 3 5579999999999975
No 7
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=7.7e-17 Score=163.11 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=101.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCC--Ce---EEEeccC-CCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGR--RV---LETVYPT-SGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~t--g~---VtTVAGt-G~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
.|.||++|++|+.|||+|+.||+|++++... +. +.+++|. |.. +|. +|.+..+.
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~--------g~~---dg~~~~a~--------- 330 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAK--------DWV---DGVGKKAR--------- 330 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCB--------CCB---CEEGGGCB---------
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCC--------CCC---CCCCcceE---------
Confidence 5999999999988999999999999998652 33 6789987 433 222 45666666
Q ss_pred CCCCcc-eeEEc--------CCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceee--cceehhhhhhhhhcCCcccc
Q 013348 76 SLIFPW-HLMKS--------EDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEI--CGVLVMEKVFLLKQMPQDWL 144 (444)
Q Consensus 76 ~Ln~P~-gL~~d--------~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~--~G~li~~~~a~l~~~~~~~~ 144 (444)
|++|. +++++ ++|+|||||++||+|+++++ +|.++++++.......+ +|.+
T Consensus 331 -~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~---------------- 392 (430)
T 3tc9_A 331 -MHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDL---------------- 392 (430)
T ss_dssp -BSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEET----------------
T ss_pred -eCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCc----------------
Confidence 99999 89884 55899999999999999995 69999999631110000 1100
Q ss_pred cccccccccccCCCccccccccccc--CCeEEEEeCCCCeEEEEeCC
Q 013348 145 LHQIDSSCSLKELPYAGLISSSIAF--QNHILLCDIVGQRIMRLNRE 189 (444)
Q Consensus 145 ~~~~~~~~~~~Gip~a~~~Sgla~~--~~~LyIADT~nhRIRkvdl~ 189 (444)
. ..+....|.+++.. ++.|||||+.||||||++++
T Consensus 393 -----~-----~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 393 -----R-----QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -----T-----TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -----h-----hhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0 00001225566654 58999999999999999875
No 8
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=3.5e-15 Score=149.38 Aligned_cols=178 Identities=16% Similarity=0.152 Sum_probs=126.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.+++++++++.|||+|. +++|+++|+.++.+.++++.+.. |. . -..|+
T Consensus 220 ~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~---------------g~----~----------~~~P~ 269 (409)
T 3hrp_A 220 KIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELS---------------GS----L----------GTNPG 269 (409)
T ss_dssp CCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCC---------------SC----C----------CCSSC
T ss_pred CcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEeccccc---------------CC----C----------CCCcc
Confidence 6899999996678999987 89999999999988888876432 10 0 12377
Q ss_pred -eeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 -HLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 -gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ ++.|||+|+.+|+|+++|++ |.+.++++.........|. +. .....
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~------~~----------------~~~~~--- 323 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPD-GECEWFCGSATQKTVQDGL------RE----------------EALFA--- 323 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECTTCCSCBCEE------GG----------------GCBCS---
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecC-CCEEEEEeCCCCCCcCCCc------cc----------------ccEeC---
Confidence 999998 59999999999999999986 6688888532110000110 00 00001
Q ss_pred ccccccccc-cCCeEEEEeC-CCCeEEEEeCCCCeEEEeeec-cc-c---ccCCceeeeeccceeeec-c-cccCCcccc
Q 013348 160 AGLISSSIA-FQNHILLCDI-VGQRIMRLNRESGVCSNFQFS-NF-A---ILGLPYWFAFPLERVYAV-A-GGHQGSWTD 230 (444)
Q Consensus 160 a~~~Sgla~-~~~~LyIADT-~nhRIRkvdl~tG~vST~~fs-g~-g---~lg~P~~l~~PL~~v~~~-~-~~~~g~~~~ 230 (444)
.|.+++. ..+.|||||+ .+|||+++++.+|.++++.-. +. | .......|+.|-..+++. + .+++++.++
T Consensus 324 --~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 324 --QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp --SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred --CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence 1334443 3567999999 999999999999999998543 11 1 133456688888888865 4 457999999
Q ss_pred eeeeeec
Q 013348 231 HIQRCSL 237 (444)
Q Consensus 231 ~i~~v~~ 237 (444)
+|+++++
T Consensus 402 ~Ir~i~~ 408 (409)
T 3hrp_A 402 AIRKYAV 408 (409)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999965
No 9
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=6e-15 Score=140.53 Aligned_cols=180 Identities=12% Similarity=0.115 Sum_probs=121.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCC--eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRR--VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg--~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|.||++|++|+ |||+|+.+|+|+++|+... .+.++...+.. |.. ... |+.
T Consensus 92 ~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~---------------g~~-~~~----------~~~ 144 (329)
T 3fvz_A 92 LPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQP---------------GSD-QNH----------FCQ 144 (329)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBC---------------CCS-TTC----------CSS
T ss_pred CceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCC---------------CCC-ccc----------cCC
Confidence 699999999885 9999999999999998655 57777655433 110 112 999
Q ss_pred cceeEEcC-CCeEEEEeC-CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 80 PWHLMKSE-DDNLLIINR-SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 80 P~gL~~d~-dG~LYIADa-gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
|++|++++ +|.|||||+ ++++|+++|++ |.+....+.... +.. .....
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~-----~~~---------------------~~~~~--- 194 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQWGEESS-----GSS---------------------PRPGQ--- 194 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEECEECC-----SSS---------------------CCTTE---
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEeccCCC-----CCC---------------------CCCcc---
Confidence 99999998 799999997 79999999965 554444321110 000 00000
Q ss_pred Ccccccccccc--cCCeEEEEeCCCCeEEEEeCCCCe-EEEeeeccccccCCceeeee-ccceeeecc--cccCCcccce
Q 013348 158 PYAGLISSSIA--FQNHILLCDIVGQRIMRLNRESGV-CSNFQFSNFAILGLPYWFAF-PLERVYAVA--GGHQGSWTDH 231 (444)
Q Consensus 158 p~a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~-vST~~fsg~g~lg~P~~l~~-PL~~v~~~~--~~~~g~~~~~ 231 (444)
...|.+++. .++.|||||..+++|+++++++|. +.++...+.+ ..|+.+.+ | ..++... .++++....+
T Consensus 195 --~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 195 --FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG--RNVFAISYIP-GFLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp --ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT--TCEEEEEEET-TEEEEEECCCCTTCSCCCC
T ss_pred --cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC--CCcceeeecC-CEEEEeCCCEEeccCCCcE
Confidence 011344443 247999999999999999999554 5555433322 33444443 5 5555332 4567888888
Q ss_pred eeeeecCCCeee
Q 013348 232 IQRCSLLPGRID 243 (444)
Q Consensus 232 i~~v~~~pGri~ 243 (444)
|..+++..|++.
T Consensus 270 v~~~~~~~g~~~ 281 (329)
T 3fvz_A 270 GFVMNFSSGEII 281 (329)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEEcCCCeEE
Confidence 999988888765
No 10
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.63 E-value=7.8e-15 Score=146.92 Aligned_cols=177 Identities=13% Similarity=0.039 Sum_probs=128.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|..++.||++|+++++|+++++..+...++... . |..|.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~------------------------~----------~~~P~ 205 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------------------------N----------GSKPR 205 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC------------------------S----------SCCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC------------------------C----------CCCcc
Confidence 6999999987789999999999999999876666665421 1 78899
Q ss_pred eeEEcC-CCeEEEEeCC-CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRS-FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADag-nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ .|.||++|.+ +++|++++++....++++.+. . .
T Consensus 206 ~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~--l----------------------------------~--- 246 (400)
T 3p5b_L 206 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--I----------------------------------Q--- 246 (400)
T ss_dssp EEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS--C----------------------------------S---
T ss_pred eEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC--C----------------------------------C---
Confidence 999996 5899999987 599999999755555554210 0 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.|.+|+. .++.||++|+.+++|++++++++...+|.. +.+.++.|.. .....+ .+.++..+++|.+++
T Consensus 247 --~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~l~~P~g------l~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 247 --WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFS------LAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp --CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE-CSSTTSSEEE------EEEETTEEEEEESSSCSEEEEE
T ss_pred --ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe-CCCCCCCCEE------EEEeCCEEEEecCCCCeEEEEE
Confidence 1234443 478999999999999999999888777742 2233444444 433333 456888889999999
Q ss_pred cCCCeeeEEEe--eeCCCCccccccc
Q 013348 237 LLPGRIDIKVN--VDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~i~v~--v~~P~~~el~~p~ 260 (444)
...|+..-.|. +.-|.++.+..|+
T Consensus 318 ~~~G~~~~~i~~~~~~p~~i~v~~~~ 343 (400)
T 3p5b_L 318 RLTGSDVNLLAENLLSPEDMVLFHNL 343 (400)
T ss_dssp SSSCCCCEEEECSCSCEEEEEEESGG
T ss_pred cCCCCceEEEecCCCCCceEEEEeec
Confidence 88886543343 3347788777775
No 11
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=1.4e-14 Score=137.89 Aligned_cols=175 Identities=11% Similarity=0.073 Sum_probs=126.9
Q ss_pred CcceEEEecCCCEEEEEeCCCC------------------------eEEEEECCCCeEEEeccCCCcCccCCcchhhhhc
Q 013348 2 RPAASFYHKDDDCLYIVDSENH------------------------AIRRADMGRRVLETVYPTSGISKKNNSLWAWIME 57 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNH------------------------aIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~ 57 (444)
.|.|||+|++| .|||+|..|+ .|+++|..+|.+....|.
T Consensus 25 ~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---------------- 87 (329)
T 3fvz_A 25 QVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK---------------- 87 (329)
T ss_dssp CEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT----------------
T ss_pred CceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC----------------
Confidence 68999999998 6999999996 477777666665433322
Q ss_pred ccCcccccCccccCCCCCCCCCcceeEEcCCCeEEEEeCCCCEEEEEECCCC--cEEEeecCCccceeecceehhhhhhh
Q 013348 58 KLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDNLLIINRSFETLWIMDLASG--EIKEAVKGFSKVLEICGVLVMEKVFL 135 (444)
Q Consensus 58 ~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG--~I~TiagG~~~~~~~~G~li~~~~a~ 135 (444)
..|+.|++|+++++|+|||+|.++++|+++|+... .+.++...... |.
T Consensus 88 -----------------~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~-----g~-------- 137 (329)
T 3fvz_A 88 -----------------NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQP-----GS-------- 137 (329)
T ss_dssp -----------------TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBC-----CC--------
T ss_pred -----------------CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCC-----CC--------
Confidence 11889999999999999999999999999998654 35555421110 00
Q ss_pred hhcCCcccccccccccccccCCCccccccccccc--CCeEEEEeC-CCCeEEEEeCCCCeEEEeeeccccccCCceeeee
Q 013348 136 LKQMPQDWLLHQIDSSCSLKELPYAGLISSSIAF--QNHILLCDI-VGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF 212 (444)
Q Consensus 136 l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla~~--~~~LyIADT-~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~ 212 (444)
... ....|.+++.. ++.|||||+ .+++|++++.++..+.+++..+.+....|..|..
T Consensus 138 -----------------~~~---~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 138 -----------------DQN---HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp -----------------STT---CCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESC
T ss_pred -----------------Ccc---ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCC
Confidence 000 00113444443 689999998 7999999998887888887666655555677888
Q ss_pred ccceeeec--c-cccCCcccceeeeeecCCCeee
Q 013348 213 PLERVYAV--A-GGHQGSWTDHIQRCSLLPGRID 243 (444)
Q Consensus 213 PL~~v~~~--~-~~~~g~~~~~i~~v~~~pGri~ 243 (444)
|...+++. + .++++..+++|+.+++..|++.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 88887764 3 3468899999999999878765
No 12
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.63 E-value=9.4e-15 Score=160.22 Aligned_cols=178 Identities=13% Similarity=0.047 Sum_probs=133.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|..++.||++|+++++|+++++..+.+.++... . |..|.
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~------------------------~----------l~~P~ 517 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------------------------N----------GSKPR 517 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC------------------------T----------TCCEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC------------------------C----------CCCcc
Confidence 6999999998889999999999999999976666666432 1 77899
Q ss_pred eeEEcCC-CeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSED-DNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~d-G~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|+++.. |.||++|.++ ++|++++++....++++.+. + .
T Consensus 518 gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~--l----------------------------------~--- 558 (791)
T 3m0c_C 518 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--I----------------------------------Q--- 558 (791)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS--C----------------------------------S---
T ss_pred eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC--C----------------------------------C---
Confidence 9999975 8999999987 99999999865666555310 0 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.|.+|+. .++.||++|+.+++|+++++++....+|... .+.+.. |+++....+ .|+++..+++|.+++
T Consensus 559 --~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~-~~~l~~------P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 559 --WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED-EKRLAH------PFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp --CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-TTTTSS------EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC-CCccCC------CCEEEEeCCEEEEEECCCCEEEEEe
Confidence 1334443 4789999999999999999998888877432 233434 444444444 456889999999999
Q ss_pred cCCCeee--EEEeeeCCCCcccccccc
Q 013348 237 LLPGRID--IKVNVDIPSDTELVESLQ 261 (444)
Q Consensus 237 ~~pGri~--i~v~v~~P~~~el~~p~~ 261 (444)
...|+.. |...+.-|.++.+..|+.
T Consensus 630 k~tG~~~~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 630 RLTGSDVNLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp TTTCCCCEEEECSCSCCCCEEEESGGG
T ss_pred CCCCcceEEeecCCCCceeEeeecccc
Confidence 8888543 333455699999988763
No 13
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.59 E-value=3.3e-14 Score=141.33 Aligned_cols=175 Identities=13% Similarity=0.069 Sum_probs=125.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|+.++.||++|+.+++|+++++..+...++.. .. |..|.
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~------------------------~~----------l~~P~ 205 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW------------------------QS----------LEKPR 205 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC------------------------SS----------CSCEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec------------------------CC----------CCCCc
Confidence 699999998888999999999999999986443333321 11 78899
Q ss_pred eeEEcC-CCeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ +|.||++|.++ ++|++++++....++++... . ..
T Consensus 206 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~--~----------------------------------~~-- 247 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH--L----------------------------------FW-- 247 (386)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS--C----------------------------------SC--
T ss_pred EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC--C----------------------------------CC--
Confidence 999995 58999999999 99999999755555554210 0 01
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
|.+|+. .++.||++|+.+++|++++++++...+|...+ ++. |.+.+...+ .++++..+++|.+++
T Consensus 248 ---PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---~~~------P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 248 ---PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPH------PFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp ---EEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---CSS------EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---CCC------ceEEEEECCEEEEeeCCCCeEEEEE
Confidence 233343 47899999999999999999877666653222 344 444444333 456888889999998
Q ss_pred cCCCeee--EEEeeeCCCCccccccc
Q 013348 237 LLPGRID--IKVNVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~--i~v~v~~P~~~el~~p~ 260 (444)
...|+.. |...+.-|.|+.+..|.
T Consensus 316 ~~~G~~~~~i~~~~~~p~gi~v~~~~ 341 (386)
T 3v65_B 316 KFTGKNQEIIRNKLHFPMDIHTLHPQ 341 (386)
T ss_dssp TTTCCSCEEEECSCSCCCCEEEESGG
T ss_pred CCCCcceEEEccCCCCCceEEEEchh
Confidence 7777643 33345567888877765
No 14
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.58 E-value=7.2e-14 Score=136.30 Aligned_cols=175 Identities=12% Similarity=0.066 Sum_probs=127.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|+|+|..++.||++|+.+++|.++++......++... . +..|.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~------------------------~----------~~~P~ 125 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ------------------------E----------LDQPR 125 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS------------------------S----------CSSEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC------------------------C----------CCCcc
Confidence 6999999987889999999999999999864444443211 1 78899
Q ss_pred eeEEcC-CCeEEEEeCC-CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRS-FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADag-nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ .|.||++|.+ +++|++++++....++++.. .. .
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~l----------------------------------~--- 166 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS--EI----------------------------------Y--- 166 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS--SC----------------------------------S---
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC--CC----------------------------------C---
Confidence 999996 4899999976 89999999974444444421 00 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.|.+|+. .++.||++|+.+++|.+++++++...+|.- +.++. |.+.+...+ .+.++..+++|.+++
T Consensus 167 --~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~---~~~~~------P~glav~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 167 --WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---GSLPH------PFALTLFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp --CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---SCCSC------EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec---CCCCC------ceEEEEeCCEEEEEecCCCeEEEEE
Confidence 1234443 478999999999999999999877777641 23444 444444433 456888899999999
Q ss_pred cCCCee--eEEEeeeCCCCccccccc
Q 013348 237 LLPGRI--DIKVNVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri--~i~v~v~~P~~~el~~p~ 260 (444)
...|+. .|.+.+.-|.++.+..|.
T Consensus 236 ~~~G~~~~~i~~~~~~P~~i~v~~~~ 261 (318)
T 3sov_A 236 KYTGEGLREIHSDIFSPMDIHAFSQQ 261 (318)
T ss_dssp TTTCCSCEEEECCCSSCCCEEEECGG
T ss_pred CCCCCceEEEeCCCCCCcEEEEeccc
Confidence 977764 455556678888888775
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.58 E-value=1.3e-13 Score=132.88 Aligned_cols=177 Identities=14% Similarity=0.054 Sum_probs=124.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|||+|..++.||++|+.+++|.++++....+.++... . +..|.
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~------------------------~----------~~~P~ 123 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------------------------N----------GSKPR 123 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC------------------------T----------TCCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC------------------------C----------CCCcc
Confidence 6999999987779999999999999999875555554311 1 77899
Q ss_pred eeEEcC-CCeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ +|.||++|.++ ++|++++++....+.++.. .. .
T Consensus 124 ~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~--~~----------------------------------~--- 164 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NI----------------------------------Q--- 164 (316)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--SC----------------------------------S---
T ss_pred eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC--CC----------------------------------C---
Confidence 999995 58999999986 9999999874444444321 00 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.|.+|+. .++.||++|+.+++|.+++++++...+|.-. .+.++.| .+.+...+ .++++..+++|.+++
T Consensus 165 --~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~-~~~~~~P------~giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 165 --WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED-EKRLAHP------FSLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp --CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-TTTTSSE------EEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeec-CCccCCc------EEEEEECCEEEEEECCCCeEEEEe
Confidence 1234443 4789999999999999999998777776321 1234444 44444444 445788889999999
Q ss_pred cCCCeeeEEE--eeeCCCCccccccc
Q 013348 237 LLPGRIDIKV--NVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~i~v--~v~~P~~~el~~p~ 260 (444)
...|+..-.+ .+.-|.|+.+..|.
T Consensus 236 ~~~g~~~~~i~~~~~~p~~i~v~~~~ 261 (316)
T 1ijq_A 236 RLTGSDVNLLAENLLSPEDMVLFHNL 261 (316)
T ss_dssp TTTCCCCEEEECSCSCCCCEEEESGG
T ss_pred CCCCcceEEEecCCCCceEEEEeccc
Confidence 8888643222 33456777666654
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.57 E-value=9.1e-14 Score=136.34 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=125.2
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|..++.||++|..+++|.++++......++.- .. |..|.
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~------------------------~~----------l~~P~ 162 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW------------------------QS----------LEKPR 162 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------------------TT----------CSCEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe------------------------CC----------CCCcc
Confidence 699999998888999999999999999986443333321 11 78899
Q ss_pred eeEEcC-CCeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ +|.||++|.++ ++|++++++....++++.. .. .
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~----------------------------------~--- 203 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HL----------------------------------F--- 203 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS--SC----------------------------------S---
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CC----------------------------------C---
Confidence 999996 58999999999 9999999975444444320 00 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.|.+|+. .++.||++|+.+++|.+++++++...+|...+ ++. |.+.+...+ .++++..+++|.+++
T Consensus 204 --~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---~~~------P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 204 --WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPH------PFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp --CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---CSS------EEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---CCC------ceEEEEECCEEEEecCCCCeEEEEE
Confidence 1234443 47899999999999999999977666653222 344 444444344 456888889999998
Q ss_pred cCCCeee--EEEeeeCCCCccccccc
Q 013348 237 LLPGRID--IKVNVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~--i~v~v~~P~~~el~~p~ 260 (444)
...|+.. |...+.-|.|+.+..|.
T Consensus 273 ~~~G~~~~~i~~~~~~p~gi~v~~~~ 298 (349)
T 3v64_C 273 KFTGKNQEIIRNKLHFPMDIHTLHPQ 298 (349)
T ss_dssp TTTCCSCEEEECSCSCCCCEEEECGG
T ss_pred ccCCCccEEeccCCCCCceEEEEccc
Confidence 7777643 33345668888887775
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.54 E-value=5.3e-13 Score=122.86 Aligned_cols=162 Identities=13% Similarity=0.052 Sum_probs=114.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.||++|++++.|||+|..+++|.++++......++... . +..|.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~------------------------~----------~~~P~ 125 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT------------------------G----------LVNPR 125 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS------------------------S----------CSSEE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC------------------------C----------CCCcc
Confidence 7999999998889999999999999999754333333211 1 67899
Q ss_pred eeEEcC-CCeEEEEeCC--CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 82 HLMKSE-DDNLLIINRS--FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 82 gL~~d~-dG~LYIADag--nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
++++++ +|.||++|.+ +++|++++++....+++... . ...
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~--~----------------------------------~~~- 168 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD--N----------------------------------LGL- 168 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT--T----------------------------------CSC-
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC--C----------------------------------CCC-
Confidence 999998 5899999988 78999999874433333310 0 011
Q ss_pred cccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeee
Q 013348 159 YAGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRC 235 (444)
Q Consensus 159 ~a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v 235 (444)
|.+++. .++.||++|+.+++|.+++++++...++. . .++. |.+...+.+ .++++...++|.++
T Consensus 169 ----P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~---~~~~------P~gi~~d~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 169 ----PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL-E---GLQY------PFAVTSYGKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp ----EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE-E---CCCS------EEEEEEETTEEEEEETTTTEEEEE
T ss_pred ----CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe-c---CCCC------ceEEEEeCCEEEEEECCCCeEEEE
Confidence 233333 36799999999999999999977665542 1 1233 444444444 34577778899999
Q ss_pred ecCCCeeeEEEee
Q 013348 236 SLLPGRIDIKVNV 248 (444)
Q Consensus 236 ~~~pGri~i~v~v 248 (444)
+...|++.-.+.+
T Consensus 235 d~~~g~~~~~i~~ 247 (267)
T 1npe_A 235 DLAISKEMDTFHP 247 (267)
T ss_dssp ETTTTEEEEEECC
T ss_pred eCCCCCceEEEcc
Confidence 9999987655544
No 18
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.50 E-value=4.7e-13 Score=142.66 Aligned_cols=173 Identities=13% Similarity=0.022 Sum_probs=128.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|..++.||++|+++++|.++++..+...++... . |..|.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~------------------------~----------l~~P~ 126 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK------------------------D----------LDSPR 126 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS------------------------S----------CCCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC------------------------C----------CCCcc
Confidence 6999999988889999999999999999864444444211 2 88899
Q ss_pred eeEEcC-CCeEEEEeCC-CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRS-FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADag-nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ +|.||++|.+ +++|++++++...+++++.+...
T Consensus 127 ~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~--------------------------------------- 167 (628)
T 4a0p_A 127 ALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGR--------------------------------------- 167 (628)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSS---------------------------------------
T ss_pred cEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCC---------------------------------------
Confidence 999996 5999999987 89999999987666666532111
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
|.+|+. .++.||++|+.+++|.+++++++....+. + .+..|.+.+...+ .+.++..++.|.+++
T Consensus 168 ---P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~----~------~l~~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 168 ---ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA----D------DLPHPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp ---EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----E------CCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---cceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee----c------cCCCceEEEEECCEEEEecCCCCEEEEEE
Confidence 234443 36899999999999999999887664432 1 2334555555444 445888899999999
Q ss_pred cCCCee--eEEEeeeCCCCccccccc
Q 013348 237 LLPGRI--DIKVNVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri--~i~v~v~~P~~~el~~p~ 260 (444)
...|+- .|.....-|.|+.+..|.
T Consensus 235 k~tg~~~~~l~~~~~~p~~i~v~~~~ 260 (628)
T 4a0p_A 235 KTSGQNRTIIQGHLDYVMDILVFHSS 260 (628)
T ss_dssp TTTCCSCEEEECSCCSCCEEEEECGG
T ss_pred CCCCCceEEEecCCCCcceeeeeeec
Confidence 877753 344445568888887775
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.48 E-value=1.5e-12 Score=129.46 Aligned_cols=181 Identities=15% Similarity=0.103 Sum_probs=124.9
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|+++|+.++.||++|..+++|+++++..+.++++...+ +..|.
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~----------------------------------~~~p~ 162 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG----------------------------------LESPG 162 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS----------------------------------CSCCC
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC----------------------------------CCCcc
Confidence 69999999888899999999999999999877776664331 66789
Q ss_pred eeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+|+++. .+.||++|.++++|++++++....+++..+.- .
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l------------------------------------~---- 202 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL------------------------------------E---- 202 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSC------------------------------------S----
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCC------------------------------------C----
Confidence 999994 58999999999999999997555554442100 0
Q ss_pred cccccccc--cCCeEEEEeCCC-CeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeee--cc-cccCCcccceeee
Q 013348 161 GLISSSIA--FQNHILLCDIVG-QRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYA--VA-GGHQGSWTDHIQR 234 (444)
Q Consensus 161 ~~~Sgla~--~~~~LyIADT~n-hRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~--~~-~~~~g~~~~~i~~ 234 (444)
.|.+++. .++.||++|..+ ++|.++++++.....+...+ +..|-+.+++ .+ .+++++..++|.+
T Consensus 203 -~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---------~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 203 -KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH---------LFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp -CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS---------CSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred -CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC---------CCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 0223332 378999999999 99999999987776664222 3345555554 22 4468888999999
Q ss_pred eecCCCeeeEEE--eeeCCCCcccccccccceeeeee
Q 013348 235 CSLLPGRIDIKV--NVDIPSDTELVESLQEGCIWRQA 269 (444)
Q Consensus 235 v~~~pGri~i~v--~v~~P~~~el~~p~~e~ciwrq~ 269 (444)
+++--+....-+ ...-|.++.+ ..+.-.|-..
T Consensus 273 ~d~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~ 306 (386)
T 3v65_B 273 ANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDW 306 (386)
T ss_dssp ECTTSCSCEEEECSSCSSEEEEEE---ETTEEEEEET
T ss_pred EeCCCCeeEEEEECCCCCceEEEE---ECCEEEEeeC
Confidence 986422111111 1223545444 3455666654
No 20
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.47 E-value=1.1e-12 Score=139.40 Aligned_cols=157 Identities=11% Similarity=0.010 Sum_probs=117.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|||+|..++.||++|+++++|.++++......++... . |+.|+
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~------------------------~----------l~~P~ 438 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISE------------------------D----------LEEPR 438 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT------------------------T----------CCSEE
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEEC------------------------C----------CCCee
Confidence 6999999987789999999999999999865544444311 1 88999
Q ss_pred eeEEcCC-CeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSED-DNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~d-G~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++. |.||++|.+. ++|++++++....+.++.+ . +
T Consensus 439 ~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~--~------------------------------------l-- 478 (619)
T 3s94_A 439 AIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT--S------------------------------------L-- 478 (619)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--S------------------------------------C--
T ss_pred eEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC--C------------------------------------C--
Confidence 9999975 9999999885 8999999874334444421 0 0
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
..|.||+. .++.||+||+.+++|.++++++....++... . +.+|.+.+...+ .+.+|..++.|++++
T Consensus 479 -~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~---~------l~~P~glav~~~~ly~tD~~~~~I~~~~ 548 (619)
T 3s94_A 479 -GWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVED---K------IPHIFGFTLLGDYVYWTDWQRRSIERVH 548 (619)
T ss_dssp -SCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEEC---C------CCSSCCEEEETTEEEEECTTSSCEEEEE
T ss_pred -CCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEecc---C------CCCcEEEEEECCEEEEeecCCCeEEEEE
Confidence 01344444 3789999999999999999998887776432 2 334555544444 456999999999999
Q ss_pred cCCCee
Q 013348 237 LLPGRI 242 (444)
Q Consensus 237 ~~pGri 242 (444)
...|..
T Consensus 549 k~~g~~ 554 (619)
T 3s94_A 549 KRSAER 554 (619)
T ss_dssp SSSCCE
T ss_pred cCCCce
Confidence 988843
No 21
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.46 E-value=1e-12 Score=139.80 Aligned_cols=175 Identities=11% Similarity=0.047 Sum_probs=125.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|||+|..++.||++|+.+++|.++++..+.+.++... . |+.|+
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~------------------------~----------l~~P~ 130 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ------------------------E----------LDQPR 130 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS------------------------S----------CSCCC
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC------------------------C----------CCCCc
Confidence 6999999998889999999999999999876655555421 1 88899
Q ss_pred eeEEcCC-CeEEEEeCC-CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSED-DNLLIINRS-FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~d-G~LYIADag-nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++. |.||++|.+ +++|++.+++....++++.. .+
T Consensus 131 ~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~--~~-------------------------------------- 170 (619)
T 3s94_A 131 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS--EI-------------------------------------- 170 (619)
T ss_dssp CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--SC--------------------------------------
T ss_pred eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC--CC--------------------------------------
Confidence 9999975 899999987 68999999975455555421 00
Q ss_pred cccccccccc--CCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIAF--QNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~~--~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
..|.+|+.+ ++.||++|+.+++|.+++++++...++.. + .+.+|.+..+... .+.++..++.|.+++
T Consensus 171 -~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~---~------~~~~P~gi~~~~~~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 171 -YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---G------SLPHPFALTLFEDILYWTDWSTHSILACN 240 (619)
T ss_dssp -SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CCCEEESSSEEEEECTTTCSEEEEE
T ss_pred -CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe---C------CCCCceEEEEeCCEEEEecCCCCEEEEEE
Confidence 013444443 78999999999999999999877766532 1 2445656655444 446889999999999
Q ss_pred cCCCeeeEEE--eeeCCCCccccccc
Q 013348 237 LLPGRIDIKV--NVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~i~v--~v~~P~~~el~~p~ 260 (444)
...|+..-.| +..-|.++.+..|.
T Consensus 241 ~~tg~~~~~i~~~~~~p~~i~v~~~~ 266 (619)
T 3s94_A 241 KYTGEGLREIHSDIFSPMDIHAFSQQ 266 (619)
T ss_dssp SSSCCCCEECCSCCCCCSEEEECCGG
T ss_pred CCCCcccEEEecCCCCCcEEEEEccc
Confidence 9888653333 34458888887664
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.44 E-value=3.6e-12 Score=124.99 Aligned_cols=182 Identities=15% Similarity=0.103 Sum_probs=123.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|+++|+.++.||++|..+++|+++++..+.++++... . +..|.
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~------------------------~----------~~~p~ 119 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST------------------------G----------LESPG 119 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS------------------------S----------CSCCC
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC------------------------C----------CCCcc
Confidence 6899999988889999999999999999876655554322 1 67799
Q ss_pred eeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+|+++. +++||++|.++++|++++++....+++..+.- ..
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l------------------------------------~~--- 160 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL------------------------------------EK--- 160 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTC------------------------------------SC---
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCC------------------------------------CC---
Confidence 999995 58999999999999999997554444432100 00
Q ss_pred cccccccc--cCCeEEEEeCCC-CeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeee--cc-cccCCcccceeee
Q 013348 161 GLISSSIA--FQNHILLCDIVG-QRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYA--VA-GGHQGSWTDHIQR 234 (444)
Q Consensus 161 ~~~Sgla~--~~~~LyIADT~n-hRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~--~~-~~~~g~~~~~i~~ 234 (444)
|.+++. .++.||++|..+ ++|.++++++....++... .+..|-+.+++ .+ .+++++..++|.+
T Consensus 161 --P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 161 --PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---------HLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp --EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---------SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---------CCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 223333 378999999999 9999999987766665321 23445555555 22 4468888899999
Q ss_pred eecCCCeee--EEEeeeCCCCcccccccccceeeeeec
Q 013348 235 CSLLPGRID--IKVNVDIPSDTELVESLQEGCIWRQAR 270 (444)
Q Consensus 235 v~~~pGri~--i~v~v~~P~~~el~~p~~e~ciwrq~r 270 (444)
+++--+... +.....-|.++.+ ..+...|-...
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~~ 264 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDWH 264 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEE---ETTEEEEEETT
T ss_pred EeCCCCceEEEEeCCCCCceEEEE---ECCEEEEecCC
Confidence 986432111 1112334555554 33455555443
No 23
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.43 E-value=3.8e-12 Score=127.43 Aligned_cols=183 Identities=13% Similarity=0.086 Sum_probs=123.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCC----eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRR----VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg----~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
+|.||+||+.++.||++|..+++|+++++..+ ...++.+. . +
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~------------------------~----------~ 158 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------------------------D----------I 158 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS------------------------S----------C
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC------------------------C----------C
Confidence 68999999988899999999999999998542 12222211 1 7
Q ss_pred CCcceeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeec-CCccceeecceehhhhhhhhhcCCccccccccccccccc
Q 013348 78 IFPWHLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVK-GFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLK 155 (444)
Q Consensus 78 n~P~gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~Tiag-G~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~ 155 (444)
..|.+|+++. .++||++|.++++|++++++.+..+++.. +.. .
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~---------------------------------~-- 203 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS---------------------------------K-- 203 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC---------------------------------C--
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC---------------------------------C--
Confidence 7899999996 58999999999999999998776666653 111 0
Q ss_pred CCCcccccccccc--cCCeEEEEeCC-CCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeee--cc-cccCCccc
Q 013348 156 ELPYAGLISSSIA--FQNHILLCDIV-GQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYA--VA-GGHQGSWT 229 (444)
Q Consensus 156 Gip~a~~~Sgla~--~~~~LyIADT~-nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~--~~-~~~~g~~~ 229 (444)
|.+|+. .++.||++|.. +++|.++++++....++...+ +..|-+.+++ .+ .+++|+.+
T Consensus 204 -------P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~---------l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 204 -------PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN---------IQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp -------EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS---------CSCEEEEEEETTTTEEEEEETTT
T ss_pred -------cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC---------CCceEEEEEEeCCCEEEEEECCC
Confidence 223332 36899999976 599999999987777764322 3345555555 22 44688899
Q ss_pred ceeeeeecCCCeeeEEEee--eCCCCcccccccccceeeeeec
Q 013348 230 DHIQRCSLLPGRIDIKVNV--DIPSDTELVESLQEGCIWRQAR 270 (444)
Q Consensus 230 ~~i~~v~~~pGri~i~v~v--~~P~~~el~~p~~e~ciwrq~r 270 (444)
++|.++++--+....-+.. .++.-.-|+- ..+...|-...
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~ 309 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDII 309 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESS
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCC
Confidence 9999998743322211111 1222222332 56677887643
No 24
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.43 E-value=3.7e-13 Score=144.67 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=124.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|||+|..++.|||+|..+++|+++++..+.+.++... . +..|.
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~------------------------~----------~~~P~ 499 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------------------------Q----------GSKPR 499 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC------------------------S----------SCCCC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC------------------------C----------CCCcc
Confidence 6999999977779999999999999999877767666432 1 67799
Q ss_pred eeEEcC-CCeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSE-DDNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~-dG~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++++ .|.||++|.++ ++|++++++....++++.. .+ ..
T Consensus 500 giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~--~l----------------------------------~~-- 541 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NI----------------------------------QW-- 541 (699)
T ss_dssp CEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS--SC----------------------------------SS--
T ss_pred eEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC--CC----------------------------------CC--
Confidence 999986 48999999886 8999999863333333210 00 11
Q ss_pred ccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
|.+|+. .++.||++|+.+++|.++++++....+|.- ..+.+ ..|.+...... .++++...++|.+++
T Consensus 542 ---PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~------~~P~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 542 ---PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRL------AHPFSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp ---CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-CSSSC------SSCCCCEEETTEEEEECSTTTCEEEEE
T ss_pred ---ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-cCCcC------CCceEeEEECCEEEEEeCCCCeEEEEE
Confidence 234443 468999999999999999998766666531 11233 34545444433 455888889999999
Q ss_pred cCCCeeeEEE--eeeCCCCccccccc
Q 013348 237 LLPGRIDIKV--NVDIPSDTELVESL 260 (444)
Q Consensus 237 ~~pGri~i~v--~v~~P~~~el~~p~ 260 (444)
...|+..=.| .+.-|.++.+..|.
T Consensus 612 ~~~G~~~~~i~~~~~~P~~i~v~~~~ 637 (699)
T 1n7d_A 612 RLTGSDVNLLAENLLSPEDMVLFHQL 637 (699)
T ss_dssp TTTEEEEECCCTTCSSCCCCCBCSSS
T ss_pred ccCCCceEEeecCCCCCcEEEEeCcc
Confidence 8888764333 23457788777765
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.43 E-value=3.3e-12 Score=117.54 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=90.7
Q ss_pred CcceEEEecCCCEEEEEeCC--CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSE--NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe--NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|.|+++|++++.|||+|.. +++|.++++......++.- .. +..
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~------------------------~~----------~~~ 168 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ------------------------DN----------LGL 168 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC------------------------TT----------CSC
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE------------------------CC----------CCC
Confidence 69999999987899999987 7899999874332222210 01 778
Q ss_pred cceeEEcCC-CeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 80 PWHLMKSED-DNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 80 P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
|.+++++.+ +.||++|+++|+|+++|++++...++..+. +.
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-------------------------------------~~- 210 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-------------------------------------QY- 210 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-------------------------------------CS-
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-------------------------------------CC-
Confidence 999999975 789999999999999999865554443211 11
Q ss_pred cccccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEee
Q 013348 159 YAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQ 197 (444)
Q Consensus 159 ~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~ 197 (444)
|.+++..++.||++|..+++|+++++++|.+ .+|.
T Consensus 211 ----P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 211 ----PFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp ----EEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ----ceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 2345556889999999999999999998875 4553
No 26
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.41 E-value=7e-12 Score=120.70 Aligned_cols=153 Identities=12% Similarity=0.038 Sum_probs=108.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCC----eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRR----VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg----~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
+|.|+++|+.++.||++|..+++|+++++... .+.++. ... +
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~------------------------~~~----------~ 76 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI------------------------SRD----------I 76 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE------------------------CSS----------C
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE------------------------eCC----------C
Confidence 69999999988899999999999999998642 111111 012 7
Q ss_pred CCcceeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccC
Q 013348 78 IFPWHLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKE 156 (444)
Q Consensus 78 n~P~gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~G 156 (444)
..|.+|+++. +++||++|..+++|.++|++....+++....- .
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~------------------------------------~ 120 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG------------------------------------S 120 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT------------------------------------C
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCC------------------------------------C
Confidence 8899999984 58999999999999999998666666552100 0
Q ss_pred CCcccccccccc--cCCeEEEEeCCC-CeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeee--cc-cccCCcccc
Q 013348 157 LPYAGLISSSIA--FQNHILLCDIVG-QRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYA--VA-GGHQGSWTD 230 (444)
Q Consensus 157 ip~a~~~Sgla~--~~~~LyIADT~n-hRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~--~~-~~~~g~~~~ 230 (444)
.|.+++. .++.||++|..+ ++|.++++++.....+... .+..|-+.+++ .+ .+++++..+
T Consensus 121 -----~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---------~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 121 -----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------NIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp -----CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---------SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred -----CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---------CCCCceEEEEeccCCEEEEEECCCC
Confidence 0223333 478999999986 8999999987666655321 23345555554 22 346888899
Q ss_pred eeeeeecC
Q 013348 231 HIQRCSLL 238 (444)
Q Consensus 231 ~i~~v~~~ 238 (444)
+|.++++-
T Consensus 187 ~I~~~d~d 194 (316)
T 1ijq_A 187 SISSIDVN 194 (316)
T ss_dssp EEEEEETT
T ss_pred eEEEEecC
Confidence 99999875
No 27
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.39 E-value=7.1e-12 Score=133.64 Aligned_cols=158 Identities=9% Similarity=-0.046 Sum_probs=118.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.|||+|..+++||++|+++++|.++++......++.-. . |+.|+
T Consensus 390 ~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~------------------------~----------l~~Pr 435 (628)
T 4a0p_A 390 QPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKG------------------------E----------QDRPR 435 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEEC------------------------T----------TCCEE
T ss_pred CcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeC------------------------C----------CCcee
Confidence 6999999999889999999999999999854334344211 1 78899
Q ss_pred eeEEcC-CCeEEEEeCCCC--EEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 82 HLMKSE-DDNLLIINRSFE--TLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 82 gL~~d~-dG~LYIADagnh--~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
+|++++ +|.||++|.+++ +|++++++....++++... .
T Consensus 436 ~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~--l------------------------------------- 476 (628)
T 4a0p_A 436 AVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSG--L------------------------------------- 476 (628)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSS--C-------------------------------------
T ss_pred eEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEecc--C-------------------------------------
Confidence 999998 699999999998 8999999754455555210 0
Q ss_pred ccccccccccc--CCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecc-cccCCcccceeeee
Q 013348 159 YAGLISSSIAF--QNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVA-GGHQGSWTDHIQRC 235 (444)
Q Consensus 159 ~a~~~Sgla~~--~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v 235 (444)
..|.+|+.+ .+.||++|+.+++|.++++++....+|... .+.+|.+.+...+ .+.+|..++.|.++
T Consensus 477 --~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~---------~~~~P~glav~~~~ly~tD~~~~~i~~~ 545 (628)
T 4a0p_A 477 --SKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDS---------NILQPVGLTVFENWLYWIDKQQQMIEKI 545 (628)
T ss_dssp --SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------SCSCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred --CCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcC---------CCCCcEEEEEECCEEEEEECCCCeEEEE
Confidence 013444443 679999999999999999988877776431 2345656655555 44599999999999
Q ss_pred ecCCCeee
Q 013348 236 SLLPGRID 243 (444)
Q Consensus 236 ~~~pGri~ 243 (444)
+..+|+-.
T Consensus 546 ~k~~G~~~ 553 (628)
T 4a0p_A 546 DMTGREGR 553 (628)
T ss_dssp ETTSSSCC
T ss_pred ECcCCCCc
Confidence 98888643
No 28
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.38 E-value=8.3e-12 Score=136.97 Aligned_cols=122 Identities=16% Similarity=0.279 Sum_probs=94.9
Q ss_pred CcceEEEecCCCEEEEEeCCC-CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSEN-HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeN-HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+|.|||+|+.++.||++|.++ ++|+++++....+.++... . |..|
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~------------------------~----------l~~P 560 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE------------------------N----------IQWP 560 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS------------------------S----------CSCE
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC------------------------C----------CCCc
Confidence 699999999888999999987 9999999865555554321 1 8889
Q ss_pred ceeEEc-CCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 81 WHLMKS-EDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 81 ~gL~~d-~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
.+|++| .++.||+||+++++|+++|++....++++.+... ++.
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~------------------------------------l~~ 604 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR------------------------------------LAH 604 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT------------------------------------TSS
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc------------------------------------cCC
Confidence 999999 4589999999999999999986666666532110 111
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCCCe-EEEe
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRESGV-CSNF 196 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~-vST~ 196 (444)
|.+|+.+++.||++|..+++|++++..+|. +.++
T Consensus 605 ---P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 605 ---PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp ---EEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ---CCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 235667888999999999999999987774 4444
No 29
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.35 E-value=1e-11 Score=121.04 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=91.9
Q ss_pred CcceEEEecCCCEEEEEeCC-CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSE-NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe-NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+|.||++|+.++.||++|.+ +++|.++++.....+++... . |..|
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~------------------------~----------l~~P 168 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS------------------------E----------IYWP 168 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS------------------------S----------CSCE
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC------------------------C----------CCCc
Confidence 69999999988899999975 89999999853333333211 1 7889
Q ss_pred ceeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 81 WHLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 81 ~gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
.+|+++. ++.||+||+.+++|+++|++.+..++++.+. .+.
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~------------------------------------~~~-- 210 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS------------------------------------LPH-- 210 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC------------------------------------CSC--
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC------------------------------------CCC--
Confidence 9999995 5899999999999999999855555555210 012
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEe
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNF 196 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~ 196 (444)
|.+++.+++.||++|..+++|.+++..+|.. .++
T Consensus 211 ---P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 211 ---PFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ---EEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ---ceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 3356667889999999999999999977764 444
No 30
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.34 E-value=7.7e-11 Score=111.55 Aligned_cols=191 Identities=8% Similarity=-0.066 Sum_probs=122.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|+++++++ .|||+|..+++|.++|+..+ +.++...+ ..|.
T Consensus 33 ~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~-~~~~~~~~-----------------------------------~~p~ 75 (306)
T 2p4o_A 33 FLENLASAPDG-TIFVTNHEVGEIVSITPDGN-QQIHATVE-----------------------------------GKVS 75 (306)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTTCC-EEEEEECS-----------------------------------SEEE
T ss_pred CcceEEECCCC-CEEEEeCCCCeEEEECCCCc-eEEEEeCC-----------------------------------CCce
Confidence 58999999987 59999999999999997654 44333221 1378
Q ss_pred eeEEcCCCeEEEEeCCCC--EEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSEDDNLLIINRSFE--TLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh--~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|+++.+|+|||||.+++ +|+++|..+|++++++.- +.. .++
T Consensus 76 gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~-~~~----------------------------------~~~- 119 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL-PDA----------------------------------IFL- 119 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC-TTC----------------------------------SCE-
T ss_pred eEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC-CCc----------------------------------ccc-
Confidence 999999999999998754 599999999999877641 100 000
Q ss_pred cccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCC-ceeeeeccceeeecc-cccCCcccceeeeee
Q 013348 160 AGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGL-PYWFAFPLERVYAVA-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~-P~~l~~PL~~v~~~~-~~~~g~~~~~i~~v~ 236 (444)
.+++ ..++.+|++|..+++|.++|..++..+.+...+...... ...+..|-.+..+.+ .+++++.+++|.+|+
T Consensus 120 ----~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 120 ----NGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp ----EEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ----CcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEE
Confidence 1111 235679999999999999999876433321112111001 112333433322322 446888899999998
Q ss_pred cCC-Ceee-EEEee--eCCCCcccccccccceeeeeeccc
Q 013348 237 LLP-GRID-IKVNV--DIPSDTELVESLQEGCIWRQARGT 272 (444)
Q Consensus 237 ~~p-Gri~-i~v~v--~~P~~~el~~p~~e~ciwrq~rg~ 272 (444)
+.. |++. .++-. ..|.|+.+.. ++++|==.+++
T Consensus 196 ~~~~g~~~~~~~~~~~~~P~gi~vd~---dG~l~va~~~~ 232 (306)
T 2p4o_A 196 VDSTDKPGEPEIFVEQTNIDDFAFDV---EGNLYGATHIY 232 (306)
T ss_dssp BCTTSCBCCCEEEEESCCCSSEEEBT---TCCEEEECBTT
T ss_pred eCCCCCCCccEEEeccCCCCCeEECC---CCCEEEEeCCC
Confidence 865 5431 22222 3577776652 67888766554
No 31
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.25 E-value=8.6e-11 Score=111.23 Aligned_cols=117 Identities=15% Similarity=0.154 Sum_probs=89.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.||+++++++.|||||.+ |.|+++|+.++.+++++... . | .. ++.|.
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~-~---------------~----~~----------~~~p~ 129 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSV-D---------------G----VP----------FKWLY 129 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEE-T---------------T----EE----------CSCEE
T ss_pred CCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccC-C---------------C----Cc----------ccccc
Confidence 59999999744589999987 56999998888888876431 0 0 12 88899
Q ss_pred eeEEcC-CCeEEEEeCCC-----------------CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccc
Q 013348 82 HLMKSE-DDNLLIINRSF-----------------ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDW 143 (444)
Q Consensus 82 gL~~d~-dG~LYIADagn-----------------h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~ 143 (444)
+|++++ +|+|||+|.++ ++|+++|+.+|.++.+..+..
T Consensus 130 ~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------------------------ 185 (322)
T 2fp8_A 130 AVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH------------------------ 185 (322)
T ss_dssp EEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES------------------------
T ss_pred eEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc------------------------
Confidence 999999 89999999874 689999999898876653211
Q ss_pred ccccccccccccCCCccccccccc--ccCCeEEEEeCCCCeEEEEeCCCC
Q 013348 144 LLHQIDSSCSLKELPYAGLISSSI--AFQNHILLCDIVGQRIMRLNRESG 191 (444)
Q Consensus 144 ~~~~~~~~~~~~Gip~a~~~Sgla--~~~~~LyIADT~nhRIRkvdl~tG 191 (444)
. |.+++ ..++.|||+|+.+++|.++++.++
T Consensus 186 -------------~-----p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 186 -------------V-----PGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp -------------C-----CCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred -------------c-----CcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 0 12222 234579999999999999999864
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.25 E-value=6.1e-10 Score=101.84 Aligned_cols=159 Identities=9% Similarity=0.121 Sum_probs=104.8
Q ss_pred CcceEEEecCCCEEEEEeCC-CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSE-NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe-NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.+++++..++.|||+|.. ++.|+++|.....+.++ +.+ . +..|
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~-~~~-----------------------~----------~~~~ 123 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKF-GAT-----------------------I----------LQHP 123 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEE-CTT-----------------------T----------CSCE
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEe-cCc-----------------------c----------CCCc
Confidence 68999996445589999975 99999999543344333 110 1 6779
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
.+|+++++|.|||++.++++|+++|+....+.++.. .... ..
T Consensus 124 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~-~~~~----------------------------------~~--- 165 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC-SKHL----------------------------------EF--- 165 (286)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC-TTTC----------------------------------SS---
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCC-CCcc----------------------------------CC---
Confidence 999999999999999999999999976444444421 0000 00
Q ss_pred cccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccc-eeeeeec
Q 013348 161 GLISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTD-HIQRCSL 237 (444)
Q Consensus 161 ~~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~-~i~~v~~ 237 (444)
|.+++. .+++||++|+.+++|++++.++..+.++.. .|.+..|..+.+ |-++. ++++..+. .|..++.
T Consensus 166 --p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~g~~~~p~~i~~d~~G~l-----~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 166 --PNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGG--EGITNYPIGVGINSNGEI-----LIADNHNNFNLTIFTQ 236 (286)
T ss_dssp --EEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESC--TTTSCSEEEEEECTTCCE-----EEEECSSSCEEEEECT
T ss_pred --cEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEcc--CCccCCCcEEEECCCCCE-----EEEeCCCCEEEEEECC
Confidence 223332 356899999999999999998877777643 334455555444 32222 23444443 7888874
Q ss_pred CCCee
Q 013348 238 LPGRI 242 (444)
Q Consensus 238 ~pGri 242 (444)
.|+.
T Consensus 237 -~g~~ 240 (286)
T 1q7f_A 237 -DGQL 240 (286)
T ss_dssp -TSCE
T ss_pred -CCCE
Confidence 4544
No 33
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.24 E-value=4.1e-10 Score=102.94 Aligned_cols=161 Identities=13% Similarity=0.175 Sum_probs=107.2
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+|++++++ .|||+|+.+++|+++|+....+.++...+.. ... +..|.
T Consensus 31 ~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~-------------------~~~----------~~~p~ 80 (286)
T 1q7f_A 31 EPSGVAVNAQN-DIIVADTNNHRIQIFDKEGRFKFQFGECGKR-------------------DSQ----------LLYPN 80 (286)
T ss_dssp CEEEEEECTTC-CEEEEEGGGTEEEEECTTSCEEEEECCBSSS-------------------TTC----------BSSEE
T ss_pred CCceEEECCCC-CEEEEECCCCEEEEECCCCcEEEEecccCCC-------------------ccc----------ccCce
Confidence 69999999887 5999999999999999875555555432211 012 78899
Q ss_pred eeEE-cCCCeEEEEeCC-CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMK-SEDDNLLIINRS-FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~-d~dG~LYIADag-nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|++ +.+|.|||++.+ +++|+++|.....+.++..+.. ..
T Consensus 81 ~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~------------------------------------~~-- 122 (286)
T 1q7f_A 81 RVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL------------------------------------QH-- 122 (286)
T ss_dssp EEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC------------------------------------SC--
T ss_pred EEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC------------------------------------CC--
Confidence 9999 577999999976 8999999964333433321100 00
Q ss_pred cccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccceeeeeec
Q 013348 160 AGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSL 237 (444)
Q Consensus 160 a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~ 237 (444)
|.+++ ..++.|||+|..+++|++++.++..+.++... +.+..|..+.+ |-++ .++++...+.|..++.
T Consensus 123 ---~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--~~~~~p~~i~~~~~g~-----l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 123 ---PRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS--KHLEFPNGVVVNDKQE-----IFISDNRAHCVKVFNY 192 (286)
T ss_dssp ---EEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECT--TTCSSEEEEEECSSSE-----EEEEEGGGTEEEEEET
T ss_pred ---ceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCC--CccCCcEEEEECCCCC-----EEEEECCCCEEEEEcC
Confidence 12222 23567999999999999999887777776432 23333433332 2121 2346666788888886
Q ss_pred CCCe
Q 013348 238 LPGR 241 (444)
Q Consensus 238 ~pGr 241 (444)
.|+
T Consensus 193 -~g~ 195 (286)
T 1q7f_A 193 -EGQ 195 (286)
T ss_dssp -TCC
T ss_pred -CCC
Confidence 444
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.22 E-value=1.2e-10 Score=104.87 Aligned_cols=153 Identities=11% Similarity=0.073 Sum_probs=102.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+|+++++| .|||+|..++.|.+++..+....... ... +..|.
T Consensus 109 ~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~------------------------~~~----------~~~p~ 153 (270)
T 1rwi_B 109 YPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLP------------------------FTG----------LNDPD 153 (270)
T ss_dssp SEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECC------------------------CCS----------CCSCC
T ss_pred CCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeec------------------------ccc----------CCCce
Confidence 58999999887 59999999999999975433221110 011 67899
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+|+++++|+|||++.++++|+++|+.++.+.....+. + .
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--------------------------------------~---~ 192 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD--------------------------------------I---T 192 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS--------------------------------------C---C
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC--------------------------------------C---C
Confidence 9999999999999999999999999876654322100 0 0
Q ss_pred ccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccceeeeeecC
Q 013348 162 LISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSLL 238 (444)
Q Consensus 162 ~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~~ 238 (444)
.|.+++. .++.||+++..+++|++++++++....+... .+..|..+.+ |-++ .++++..+++|+.+++.
T Consensus 193 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~---~~~~p~~i~~~~~g~-----l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 193 APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT---GLNTPLAVAVDSDRT-----VYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC---SCSCEEEEEECTTCC-----EEEEEGGGTEEEEECCC
T ss_pred CceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC---CCCCceeEEECCCCC-----EEEEECCCCEEEEEcCC
Confidence 1223333 2459999999999999999988766553222 1233433332 2111 33466677778777654
No 35
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=2.3e-10 Score=102.92 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=100.8
Q ss_pred CcceEEEecCCCEEEE-EeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYI-VDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYV-ADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.+|+++++| .||| +|+.++.|++++..++....+.. .. +..|
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~------------------------~~----------~~~p 69 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPF------------------------NG----------LYQP 69 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCC------------------------CS----------CCSC
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEee------------------------CC----------cCCc
Confidence 79999999888 4999 99999999999865544322210 01 6779
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
++|+++++|+|||++. +++|+++|+.++.+..+..+.. ..
T Consensus 70 ~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~------------------------------------~~--- 109 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL------------------------------------NY--- 109 (270)
T ss_dssp CCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC------------------------------------SS---
T ss_pred ceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc------------------------------------CC---
Confidence 9999999999999999 8999999998766554431100 00
Q ss_pred cccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeec-c-cccCCcccceeeeeec
Q 013348 161 GLISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAV-A-GGHQGSWTDHIQRCSL 237 (444)
Q Consensus 161 ~~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~-~-~~~~g~~~~~i~~v~~ 237 (444)
|.+++. .++.||++|..+++|.+++..+.....+. .+.+.. |...+++. + .++++.....|.+++.
T Consensus 110 --p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~---~~~~~~------p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 110 --PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP---FTGLND------PDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp --EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC---CCSCCS------CCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred --CcceEECCCCCEEEEECCCCEEEEEECCCceeEeec---cccCCC------ceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 122222 25679999999999999987665544321 112223 33333332 2 2335555678888887
Q ss_pred CCCee
Q 013348 238 LPGRI 242 (444)
Q Consensus 238 ~pGri 242 (444)
..++.
T Consensus 179 ~~~~~ 183 (270)
T 1rwi_B 179 ESNNQ 183 (270)
T ss_dssp TTCCE
T ss_pred CCCce
Confidence 66543
No 36
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.18 E-value=8.3e-10 Score=104.45 Aligned_cols=168 Identities=12% Similarity=0.085 Sum_probs=107.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCe--EEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHA--IRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHa--IRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
+|.||+++++|+ |||||..++. |.++|..+|.+++++.... ...
T Consensus 73 ~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~---------------------------------~~~ 118 (306)
T 2p4o_A 73 KVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLPD---------------------------------AIF 118 (306)
T ss_dssp EEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECTT---------------------------------CSC
T ss_pred CceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCCC---------------------------------ccc
Confidence 589999998885 9999987654 8889988999988775411 233
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
|.+++...++++|++|..+++||++|+.++..+.... .+... . .....+++.
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~-~~~~~-----~----------------------~~~~~~~~~ 170 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE-HPMLA-----R----------------------SNSESVFPA 170 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE-CGGGS-----C----------------------SSTTCCSCS
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE-CCccc-----c----------------------ccccCCCCc
Confidence 4566666668899999999999999998764322211 00000 0 000001111
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCC-CeEEEeeeccccccCCceeeeeccceeeec-c-cccCCcccceeeeee
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRES-GVCSNFQFSNFAILGLPYWFAFPLERVYAV-A-GGHQGSWTDHIQRCS 236 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~t-G~vST~~fsg~g~lg~P~~l~~PL~~v~~~-~-~~~~g~~~~~i~~v~ 236 (444)
+.++...++.||++|+.+++|.++++++ |.+.... .+ ..+..|-+.+.+. | .++++..+++|.+|+
T Consensus 171 ---pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~-----~~---~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 171 ---ANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPE-----IF---VEQTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp ---EEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCE-----EE---EESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred ---CCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccE-----EE---eccCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 3445456779999999999999999985 5432211 00 0113455555532 3 334666778899998
Q ss_pred cCCCeee
Q 013348 237 LLPGRID 243 (444)
Q Consensus 237 ~~pGri~ 243 (444)
.. |++.
T Consensus 240 ~~-G~~~ 245 (306)
T 2p4o_A 240 PD-RSTT 245 (306)
T ss_dssp TT-CCEE
T ss_pred CC-CCEE
Confidence 64 7653
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.15 E-value=9.6e-11 Score=126.02 Aligned_cols=121 Identities=16% Similarity=0.254 Sum_probs=90.1
Q ss_pred CcceEEEecCCCEEEEEeCCC-CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSEN-HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeN-HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+|.|||+|+.++.||++|.++ ++|.++++......++.. .. |..|
T Consensus 497 ~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~------------------------~~----------l~~P 542 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT------------------------EN----------IQWP 542 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC------------------------SS----------CSSC
T ss_pred CcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe------------------------CC----------CCCc
Confidence 699999999888999999876 899998874222222210 12 8889
Q ss_pred ceeEEcCC-CeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 81 WHLMKSED-DNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 81 ~gL~~d~d-G~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
.+|+++.+ +.||++|+++++|+++|++....++++..... .+.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~----------------------------------~~~-- 586 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR----------------------------------LAH-- 586 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSS----------------------------------CSS--
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCc----------------------------------CCC--
Confidence 99999964 89999999999999999975555555421000 011
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
|.+|+.+++.||++|..+++|++++..+|...+
T Consensus 587 ---P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 587 ---PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp ---CCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred ---ceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 335666788999999999999999998887654
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.14 E-value=2e-09 Score=97.02 Aligned_cols=155 Identities=17% Similarity=0.139 Sum_probs=104.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++| .|||++..++.|.++|. ++.+..+.... . +..|.
T Consensus 142 ~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-----------------------~----------~~~~~ 186 (299)
T 2z2n_A 142 YPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIPT-----------------------P----------ASGPV 186 (299)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSS-----------------------T----------TCCEE
T ss_pred CCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCC-----------------------C----------CCcce
Confidence 58999999887 69999999999999998 78776542210 1 56789
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+++++++|.|||++..+++|+++|+ +|.+..+...... ..
T Consensus 187 ~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~-----------------------------------~~---- 226 (299)
T 2z2n_A 187 GITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPN-----------------------------------AR---- 226 (299)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT-----------------------------------CC----
T ss_pred eEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCC-----------------------------------CC----
Confidence 9999999999999999999999999 8887765321000 00
Q ss_pred ccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeecccccCCcccceeeeeecCCC
Q 013348 162 LISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAVAGGHQGSWTDHIQRCSLLPG 240 (444)
Q Consensus 162 ~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~v~~~pG 240 (444)
|.+++. .++.|||++..+++|.++++ +|.+..+.+.+ ..+.|..+.+ ..+...-++....|.++++..+
T Consensus 227 -~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~--~~~~~~~i~~------~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 227 -PHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQI--KSAEPHGICF------DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp -EEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSS--SSCCEEEEEE------CSSCEEEEETTTEEEEEEEC--
T ss_pred -ceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCC--CCCccceEEe------cCCCEEEEecCCcEEEEEcCcc
Confidence 122222 35679999999999999999 57777664432 1233333332 2333333333567777777655
Q ss_pred e
Q 013348 241 R 241 (444)
Q Consensus 241 r 241 (444)
+
T Consensus 297 ~ 297 (299)
T 2z2n_A 297 N 297 (299)
T ss_dssp -
T ss_pred c
Confidence 4
No 39
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.14 E-value=1.2e-09 Score=103.27 Aligned_cols=152 Identities=9% Similarity=-0.016 Sum_probs=102.9
Q ss_pred CcceEEEec-CCCEEEEEeCCC-----------------CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCccc
Q 013348 2 RPAASFYHK-DDDCLYIVDSEN-----------------HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFER 63 (444)
Q Consensus 2 ~P~GIa~D~-~g~~LYVADTeN-----------------HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~ 63 (444)
.|.++++|+ +| .|||+|+.+ ++|.++|..++.++++..
T Consensus 127 ~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------------------- 182 (322)
T 2fp8_A 127 WLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK----------------------- 182 (322)
T ss_dssp CEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------------
T ss_pred ccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------------
Confidence 589999998 77 699999875 467777776676655421
Q ss_pred ccCccccCCCCCCCCCcceeEEcCCCe-EEEEeCCCCEEEEEECCCCc---EEEeecCCccceeecceehhhhhhhhhcC
Q 013348 64 DNDTKSEKLDPQSLIFPWHLMKSEDDN-LLIINRSFETLWIMDLASGE---IKEAVKGFSKVLEICGVLVMEKVFLLKQM 139 (444)
Q Consensus 64 ~a~~~~~~~~~~~Ln~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~---I~TiagG~~~~~~~~G~li~~~~a~l~~~ 139 (444)
. +..|.+|+++++|. |||+|+.+++|+++++.++. .+.++.
T Consensus 183 --~----------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~----------------------- 227 (322)
T 2fp8_A 183 --E----------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK----------------------- 227 (322)
T ss_dssp --E----------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------------
T ss_pred --C----------CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------------
Confidence 1 67799999999875 99999999999999987532 222110
Q ss_pred CcccccccccccccccCCCccccccccc-ccCCeEEEEeCC----------CCeEEEEeCCCCeEEEeeeccccccCCce
Q 013348 140 PQDWLLHQIDSSCSLKELPYAGLISSSI-AFQNHILLCDIV----------GQRIMRLNRESGVCSNFQFSNFAILGLPY 208 (444)
Q Consensus 140 ~~~~~~~~~~~~~~~~Gip~a~~~Sgla-~~~~~LyIADT~----------nhRIRkvdl~tG~vST~~fsg~g~lg~P~ 208 (444)
..| | .+++ ..+++|||++.. +++|.+++.++..+..+...+-..+..|+
T Consensus 228 --------------~~g-P-----~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~ 287 (322)
T 2fp8_A 228 --------------IPN-P-----GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFE 287 (322)
T ss_dssp --------------CSS-E-----EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCC
T ss_pred --------------CCC-C-----CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccce
Confidence 001 2 2222 235689999987 68999999987767777644311244444
Q ss_pred eeeeccceeeecc-cccCCcccceeeeeecC
Q 013348 209 WFAFPLERVYAVA-GGHQGSWTDHIQRCSLL 238 (444)
Q Consensus 209 ~l~~PL~~v~~~~-~~~~g~~~~~i~~v~~~ 238 (444)
.+.. ..+ .++.+..+++|.+|++.
T Consensus 288 ~~~~------~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 288 QIQE------HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEE------ETTEEEEECSSCSEEEEEEC-
T ss_pred EEEE------eCCEEEEeecCCCceEEEecc
Confidence 4433 233 33566778889888763
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=2.3e-09 Score=96.74 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=89.5
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++|+ |||++..++.|.++|. ++.+..+...+ . +..|.
T Consensus 147 ~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~-----------------------~----------~~~~~ 191 (300)
T 2qc5_A 147 YPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEEYPLPT-----------------------N----------AAAPV 191 (300)
T ss_dssp CEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSS-----------------------T----------TCCEE
T ss_pred CceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEEeeCCC-----------------------C----------CCCcc
Confidence 589999998885 9999999999999998 67665542110 1 66799
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+++++.+|+|||++..+++|+++|+ +|.+..+...... ..
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~-----------------------------------~~---- 231 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPN-----------------------------------AR---- 231 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT-----------------------------------CC----
T ss_pred eEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCC-----------------------------------CC----
Confidence 9999999999999999999999998 6777665321000 00
Q ss_pred ccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 162 LISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 162 ~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
|.+++. .++.|||++..+++|.++++ +|.+..+.
T Consensus 232 -~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~ 266 (300)
T 2qc5_A 232 -PHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQ 266 (300)
T ss_dssp -EEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEE
T ss_pred -ceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEE
Confidence 222332 35679999999999999999 57766654
No 41
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.12 E-value=2.5e-09 Score=96.52 Aligned_cols=157 Identities=12% Similarity=0.145 Sum_probs=109.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+|++|++| .|||++..++.|.++|.. +.+..+.-. .. +..|+
T Consensus 21 ~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~~~~~~-----------------------~~----------~~~~~ 65 (300)
T 2qc5_A 21 GPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIKEFEVP-----------------------TP----------DAKVM 65 (300)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECS-----------------------ST----------TCCEE
T ss_pred CcceeeECCCC-CEEEEcCCCCeEEEECCC-CceEEEECC-----------------------CC----------CCcce
Confidence 69999999887 599999999999999987 766653210 01 56799
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+|+++++|+|||++.++++|+++|+. |.+..+...... .
T Consensus 66 ~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~-----------------------------------~----- 104 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD-----------------------------------S----- 104 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT-----------------------------------C-----
T ss_pred eEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC-----------------------------------C-----
Confidence 99999999999999999999999998 887655421000 0
Q ss_pred ccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccceeeeeecCC
Q 013348 162 LISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSLLP 239 (444)
Q Consensus 162 ~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~~p 239 (444)
.|.+++. .++.|||++..+++|.+++.+ |.+..+.+.. ....|..+.+ |-+++ ++.+...+.|.+++. .
T Consensus 105 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~--~~~~~~~i~~d~~g~l-----~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPN--KGSYPAFITLGSDNAL-----WFTENQNNSIGRITN-T 175 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSSE-----EEEETTTTEEEEECT-T
T ss_pred CCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCC--CCCCceeEEECCCCCE-----EEEecCCCeEEEECC-C
Confidence 0122222 367899999999999999998 7777664322 2233444333 22222 234444677888887 6
Q ss_pred Ceee
Q 013348 240 GRID 243 (444)
Q Consensus 240 Gri~ 243 (444)
|++.
T Consensus 176 g~~~ 179 (300)
T 2qc5_A 176 GKLE 179 (300)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7654
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.06 E-value=7e-09 Score=93.50 Aligned_cols=156 Identities=13% Similarity=0.113 Sum_probs=106.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+|+++++| .|||++..++.|.++|+ ++.+..+.... . ...|.
T Consensus 100 ~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~-----------------------~----------~~~~~ 144 (299)
T 2z2n_A 100 APYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPN-----------------------K----------GSYPS 144 (299)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSS-----------------------T----------TCCEE
T ss_pred CceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCC-----------------------C----------CCCCc
Confidence 68999999877 69999999999999998 77665442110 1 55689
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+++++++|.||+++..+++|+++|+ +|++..+...... ..
T Consensus 145 ~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~-----------------------------------~~---- 184 (299)
T 2z2n_A 145 FITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPA-----------------------------------SG---- 184 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT-----------------------------------CC----
T ss_pred eEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCC-----------------------------------Cc----
Confidence 9999998999999999999999999 8888765321000 00
Q ss_pred ccccccc-cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccceeeeeecCC
Q 013348 162 LISSSIA-FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSLLP 239 (444)
Q Consensus 162 ~~Sgla~-~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~~p 239 (444)
|.+++. ..+.||+++..+++|.++++ +|.+..+... .....|..+.+ |-+++ ++++.....|.+++. .
T Consensus 185 -~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~--~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~d~-~ 254 (299)
T 2z2n_A 185 -PVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIP--TPNARPHAITAGAGIDL-----WFTEWGANKIGRLTS-N 254 (299)
T ss_dssp -EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS--STTCCEEEEEECSTTCE-----EEEETTTTEEEEEET-T
T ss_pred -ceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECC--CCCCCceeEEECCCCCE-----EEeccCCceEEEECC-C
Confidence 122222 35679999999999999999 8887765432 12233333332 22222 223334577888887 5
Q ss_pred Cee
Q 013348 240 GRI 242 (444)
Q Consensus 240 Gri 242 (444)
|++
T Consensus 255 g~~ 257 (299)
T 2z2n_A 255 NII 257 (299)
T ss_dssp TEE
T ss_pred Cce
Confidence 654
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.05 E-value=3.3e-08 Score=91.24 Aligned_cols=160 Identities=12% Similarity=0.042 Sum_probs=106.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|++++++| .|||++.+++.|.++|+.+|.++++.... . + .. ++.|.
T Consensus 70 ~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-~---------------~----~~----------~~~~~ 118 (296)
T 3e5z_A 70 HQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSF-E---------------G----KK----------LNSPN 118 (296)
T ss_dssp SEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEE-T---------------T----EE----------CCCCC
T ss_pred CcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeecc-C---------------C----CC----------CCCCC
Confidence 58899999988 59999999999999999899888775321 0 0 12 77899
Q ss_pred eeEEcCCCeEEEEeC-----------------CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccc
Q 013348 82 HLMKSEDDNLLIINR-----------------SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWL 144 (444)
Q Consensus 82 gL~~d~dG~LYIADa-----------------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~ 144 (444)
+++++++|.|||+|. ..+.||++|+. |.+..+..+...+
T Consensus 119 ~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~----------------------- 174 (296)
T 3e5z_A 119 DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP----------------------- 174 (296)
T ss_dssp CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE-----------------------
T ss_pred CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC-----------------------
Confidence 999999999999986 25699999987 8887765422110
Q ss_pred cccccccccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCC-CCeE-EEeeeccccccCCceeeee-ccceeeecc
Q 013348 145 LHQIDSSCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRE-SGVC-SNFQFSNFAILGLPYWFAF-PLERVYAVA 221 (444)
Q Consensus 145 ~~~~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~-tG~v-ST~~fsg~g~lg~P~~l~~-PL~~v~~~~ 221 (444)
.|+++ ...++.| ++|+.+++|.+++++ +|.+ +....- ....+.|..+.+ | .|
T Consensus 175 ----------~gi~~-------s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~------~G 229 (296)
T 3e5z_A 175 ----------NGLAF-------LPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA------GG 229 (296)
T ss_dssp ----------EEEEE-------CTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT------TS
T ss_pred ----------ccEEE-------CCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC------CC
Confidence 01111 1223345 999999999999997 6766 332211 123344444333 2 22
Q ss_pred cccCCcccceeeeeecCCCeee
Q 013348 222 GGHQGSWTDHIQRCSLLPGRID 243 (444)
Q Consensus 222 ~~~~g~~~~~i~~v~~~pGri~ 243 (444)
+...++ ...|..++.. |+..
T Consensus 230 ~l~v~~-~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 230 LIWASA-GDGVHVLTPD-GDEL 249 (296)
T ss_dssp CEEEEE-TTEEEEECTT-SCEE
T ss_pred CEEEEc-CCeEEEECCC-CCEE
Confidence 322222 5678888875 6543
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.04 E-value=8.7e-09 Score=95.12 Aligned_cols=158 Identities=14% Similarity=0.096 Sum_probs=108.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|++|+++++.||++|+.++.|+++|+.++ +.++... ...|.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~-----------------------------------~~~~~ 72 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHP-----------------------------------SHHQN 72 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESS-----------------------------------CSSEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECC-----------------------------------CCCcc
Confidence 47899999999889999999999999999877 6555321 33478
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+|+++++|.|||++.++++|+++|+.+|+++.+........ ...
T Consensus 73 ~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~--------------------------------~~~---- 116 (296)
T 3e5z_A 73 GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKK--------------------------------LNS---- 116 (296)
T ss_dssp EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEE--------------------------------CCC----
T ss_pred eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCC--------------------------------CCC----
Confidence 99999999999999999999999999999887763211000 000
Q ss_pred cccccc-ccCCeEEEEeCC-----------------CCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeeccc
Q 013348 162 LISSSI-AFQNHILLCDIV-----------------GQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAG 222 (444)
Q Consensus 162 ~~Sgla-~~~~~LyIADT~-----------------nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~ 222 (444)
+..++ ..++.||++|+. +.+|.+++.. |.+..+. +.+..|..+.+ |-+..
T Consensus 117 -~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~----~~~~~~~gi~~s~dg~~----- 185 (296)
T 3e5z_A 117 -PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI----RDRVKPNGLAFLPSGNL----- 185 (296)
T ss_dssp -CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE----CCCSSEEEEEECTTSCE-----
T ss_pred -CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee----cCCCCCccEEECCCCCE-----
Confidence 11212 246789999862 4689999988 6666542 12333333322 22221
Q ss_pred ccCCcccceeeeeecC-CCee
Q 013348 223 GHQGSWTDHIQRCSLL-PGRI 242 (444)
Q Consensus 223 ~~~g~~~~~i~~v~~~-pGri 242 (444)
+++++....|..+++. +|++
T Consensus 186 lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 186 LVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEETTTTEEEEEEECSSSCE
T ss_pred EEEeCCCCeEEEEEECCCCcC
Confidence 2455666788888876 6765
No 45
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=8.7e-09 Score=98.95 Aligned_cols=85 Identities=13% Similarity=0.083 Sum_probs=66.6
Q ss_pred CcceEEEecCCCEEEEEeCC-----CCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSE-----NHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe-----NHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
+|+||++|+++ .|||+|++ .++|.++|+.+|. +.++.-.... + ..
T Consensus 68 ~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~---------------~----~~--------- 118 (343)
T 2qe8_A 68 TVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI---------------T----LS--------- 118 (343)
T ss_dssp CEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT---------------S----CT---------
T ss_pred EeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh---------------c----cc---------
Confidence 69999999886 79999998 5999999999998 4454321101 0 01
Q ss_pred CCCCcceeEEcC-CCeEEEEeC---CCCEEEEEECCCCcEEEeec
Q 013348 76 SLIFPWHLMKSE-DDNLLIINR---SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 76 ~Ln~P~gL~~d~-dG~LYIADa---gnh~IrkIDl~tG~I~Tiag 116 (444)
..+|.+|+++. +|.+||+|. .++.|+++|+.+|++..+..
T Consensus 119 -~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 119 -NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp -TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred -ccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 45688999995 489999999 89999999999998777653
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.94 E-value=9.5e-08 Score=91.38 Aligned_cols=162 Identities=12% Similarity=0.130 Sum_probs=109.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|++++++ ++.|||+...++.|..+|+.++.+ .++. . +..|
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~--------------------------------~~~p 86 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT----G--------------------------------FTSP 86 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE----C--------------------------------CSSE
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC----C--------------------------------CCCC
Confidence 47889985 568999999999999999998866 5551 1 4458
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE-eecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKE-AVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T-iagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
++|+++++|.|||++.+.++|.+||+.++++.. +..|... ++
T Consensus 87 ~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~-----~~-------------------------------- 129 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMD-----ME-------------------------------- 129 (328)
T ss_dssp EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCC-----TT--------------------------------
T ss_pred cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcc-----cc--------------------------------
Confidence 999997778999999889999999999998763 3322100 00
Q ss_pred ccccccccccCCeEEEEeC-CCCeEEEEeCCCCeEE-EeeeccccccCCceeeee-ccceeeeccccc-CCc----ccce
Q 013348 160 AGLISSSIAFQNHILLCDI-VGQRIMRLNRESGVCS-NFQFSNFAILGLPYWFAF-PLERVYAVAGGH-QGS----WTDH 231 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT-~nhRIRkvdl~tG~vS-T~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~-~g~----~~~~ 231 (444)
...|.+++..++.||+++. .+++|.++|++++.+. ++.. + ..|..+.+ |-++.|-....- .+. ....
T Consensus 130 ~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g----~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 130 SGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-G----IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp TCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-S----SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred CCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-C----CCccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 0113344557889999998 4899999999998864 4432 1 12333333 444544333221 100 1367
Q ss_pred eeeeecCCCeee
Q 013348 232 IQRCSLLPGRID 243 (444)
Q Consensus 232 i~~v~~~pGri~ 243 (444)
|..+|...+++.
T Consensus 205 v~~id~~t~~v~ 216 (328)
T 3dsm_A 205 LYRIDAETFTVE 216 (328)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 888898888764
No 47
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.94 E-value=3.6e-08 Score=92.51 Aligned_cols=120 Identities=11% Similarity=0.138 Sum_probs=88.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|+++|++| .||+++..+++|.+++.. |.+++++... . | .. +++|.
T Consensus 87 ~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~~~~~~-~---------------~----~~----------~~~~~ 134 (305)
T 3dr2_A 87 FTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHLLVGRY-A---------------G----KR----------LNSPN 134 (305)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECEE-T---------------T----EE----------CSCCC
T ss_pred ccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEEEEecc-C---------------C----Cc----------cCCCC
Confidence 57899999887 499999999999999975 8887776431 0 0 12 88999
Q ss_pred eeEEcCCCeEEEEeC-----------------CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccc
Q 013348 82 HLMKSEDDNLLIINR-----------------SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWL 144 (444)
Q Consensus 82 gL~~d~dG~LYIADa-----------------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~ 144 (444)
+++++++|.||++|. ..+.|+++|+++|+++.+. +...+
T Consensus 135 ~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p----------------------- 190 (305)
T 3dr2_A 135 DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP----------------------- 190 (305)
T ss_dssp CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE-----------------------
T ss_pred CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC-----------------------
Confidence 999999999999985 2478999999889887665 21110
Q ss_pred cccccccccccCCCcccccccccccCCeEEEEeCCC-----CeEEEEeCCCCeEE
Q 013348 145 LHQIDSSCSLKELPYAGLISSSIAFQNHILLCDIVG-----QRIMRLNRESGVCS 194 (444)
Q Consensus 145 ~~~~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~n-----hRIRkvdl~tG~vS 194 (444)
.|+. +..++..||++|+.+ ++|+++++.++.++
T Consensus 191 ----------~gl~-------~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~ 228 (305)
T 3dr2_A 191 ----------NGLA-------FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH 228 (305)
T ss_dssp ----------EEEE-------ECTTSSEEEEEECCC---CCCEEEEEEEETTEEE
T ss_pred ----------cceE-------EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc
Confidence 0111 123455799999984 89999998876543
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.90 E-value=3.3e-08 Score=94.54 Aligned_cols=160 Identities=16% Similarity=0.150 Sum_probs=106.2
Q ss_pred CcceEEEecCCCEEEEEeCC-CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSE-NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe-NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.+|++ +++.|||++.+ ++.|.++|+.++.+...... -..|
T Consensus 132 ~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-----------------------------------g~~p 174 (328)
T 3dsm_A 132 STEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-----------------------------------GIQP 174 (328)
T ss_dssp BCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-----------------------------------SSCB
T ss_pred CcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-----------------------------------CCCc
Confidence 7999999 46689999984 89999999998876432211 1236
Q ss_pred ceeEEcCCCeEEEEeCCC----------CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccc
Q 013348 81 WHLMKSEDDNLLIINRSF----------ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDS 150 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagn----------h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~ 150 (444)
.+++++++|.+|+++.++ ++|.+||+.++++..... .+. |
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~-----g------------------------ 224 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKL-----G------------------------ 224 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCT-----T------------------------
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-cCC-----C------------------------
Confidence 788999999999999987 899999999998763221 100 0
Q ss_pred cccccCCCccccccccc--ccCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeee-c-cceeeecccccCC
Q 013348 151 SCSLKELPYAGLISSSI--AFQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-P-LERVYAVAGGHQG 226 (444)
Q Consensus 151 ~~~~~Gip~a~~~Sgla--~~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-P-L~~v~~~~~~~~g 226 (444)
..|.+++ ..++.||+++. .|.++|++++.+....+...+ .+.|+.+.+ | -.++| +++
T Consensus 225 ----------~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~-~~~p~gi~vdp~~g~ly-----va~ 285 (328)
T 3dsm_A 225 ----------DWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFR-DTKYYGLTVNPNNGEVY-----VAD 285 (328)
T ss_dssp ----------CCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCC-SSCEEEEEECTTTCCEE-----EEE
T ss_pred ----------CCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCC-CCceEEEEEcCCCCeEE-----EEc
Confidence 0012222 24678999987 899999999987543322211 334544433 3 22222 244
Q ss_pred ----cccceeeeeecCCCeeeEEEee
Q 013348 227 ----SWTDHIQRCSLLPGRIDIKVNV 248 (444)
Q Consensus 227 ----~~~~~i~~v~~~pGri~i~v~v 248 (444)
.....|..|+.. |++.=++.+
T Consensus 286 ~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 286 AIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp CTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred ccccccCCEEEEECCC-CCEEEEEEe
Confidence 457788888887 876544443
No 49
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.89 E-value=1e-07 Score=89.38 Aligned_cols=157 Identities=13% Similarity=0.084 Sum_probs=106.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.|.+|+++++.||++|+.+++|.+++. +|.++++... -..|.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~-----------------------------------~~~~~ 89 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDA-----------------------------------TAFTN 89 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEES-----------------------------------CSCEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCC-----------------------------------CCccc
Confidence 46799999999899999999999999997 6666655321 23477
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+++++.+|.||+++.++++|+++|++ |.+++++..... .. . ..
T Consensus 90 gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~------~~----------------------~----~~---- 132 (305)
T 3dr2_A 90 GNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG------KR----------------------L----NS---- 132 (305)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT------EE----------------------C----SC----
T ss_pred eeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC------Cc----------------------c----CC----
Confidence 89999999999999999999999986 888877631110 00 0 00
Q ss_pred ccccc-cccCCeEEEEeC-----------------CCCeEEEEeCCCCeEEEeeeccccccCCceeeee-ccceeeeccc
Q 013348 162 LISSS-IAFQNHILLCDI-----------------VGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAG 222 (444)
Q Consensus 162 ~~Sgl-a~~~~~LyIADT-----------------~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~ 222 (444)
|..+ ...++.||++|+ ....|.++++++|.+..+. + +..|.-+.+ |-+.. .
T Consensus 133 -~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~---~~~p~gl~~spdg~~----l 202 (305)
T 3dr2_A 133 -PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D---LDHPNGLAFSPDEQT----L 202 (305)
T ss_dssp -CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E---ESSEEEEEECTTSSE----E
T ss_pred -CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c---CCCCcceEEcCCCCE----E
Confidence 1111 234678999885 1468999999999887763 2 233333322 33221 1
Q ss_pred ccCCcc-----cceeeeeecCCCe
Q 013348 223 GHQGSW-----TDHIQRCSLLPGR 241 (444)
Q Consensus 223 ~~~g~~-----~~~i~~v~~~pGr 241 (444)
+++++. .++|.++++..+.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTE
T ss_pred EEEecCCcCCCCCEEEEEEecCCC
Confidence 223333 4788888887654
No 50
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.88 E-value=1e-07 Score=87.26 Aligned_cols=166 Identities=11% Similarity=0.091 Sum_probs=104.9
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEe-ccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETV-YPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTV-AGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.+++++++++.|||++..+ .|.++|+. |.+..+ .... . + .. .+.|
T Consensus 72 ~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~-~---------------~----~~----------~~~~ 119 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDS-E---------------G----RR----------MQGC 119 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTT-EEEEEETT-SCEEECCSBCT-T---------------S----CB----------CBCC
T ss_pred CCceEEEecCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccC-C---------------C----cc----------ccCC
Confidence 588999998834899999865 89999988 888776 5321 0 0 01 6779
Q ss_pred ceeEEcCCCeEEEEeCCC---------------CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccc
Q 013348 81 WHLMKSEDDNLLIINRSF---------------ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLL 145 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagn---------------h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~ 145 (444)
.+++++++|+|||++.++ +.|+++|++ |.+..+..+...+
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~------------------------ 174 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP------------------------ 174 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE------------------------
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc------------------------
Confidence 999999999999999876 799999987 8776654311100
Q ss_pred ccccccccccCCCccccccccc-ccCCeEEEEeCCCCeEEEEeCC-CCeEEEee-ecccc-c-cCCceeeeeccceeeec
Q 013348 146 HQIDSSCSLKELPYAGLISSSI-AFQNHILLCDIVGQRIMRLNRE-SGVCSNFQ-FSNFA-I-LGLPYWFAFPLERVYAV 220 (444)
Q Consensus 146 ~~~~~~~~~~Gip~a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~-tG~vST~~-fsg~g-~-lg~P~~l~~PL~~v~~~ 220 (444)
.++.+ +.+. ..++.||++|+.+++|.+++++ +|.+.... +.... . ++.|.. .+++.
T Consensus 175 ---------~~i~~----~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------i~~d~ 235 (314)
T 1pjx_A 175 ---------NGIAV----RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG------MDFDE 235 (314)
T ss_dssp ---------EEEEE----EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE------EEEBT
T ss_pred ---------ceEEE----ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCc------eEECC
Confidence 01111 1000 1234799999999999999987 56654322 11111 1 133333 33322
Q ss_pred -ccc-cCCcccceeeeeecCCCeee
Q 013348 221 -AGG-HQGSWTDHIQRCSLLPGRID 243 (444)
Q Consensus 221 -~~~-~~g~~~~~i~~v~~~pGri~ 243 (444)
|+. +++.....|.+++...|++.
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPK 260 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCS
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEe
Confidence 222 23334567888887666643
No 51
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.85 E-value=9.5e-08 Score=89.51 Aligned_cols=162 Identities=6% Similarity=-0.063 Sum_probs=96.3
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
|.+++++++|+ |||+. ++.|.++|+.++.+++++... ....++.|.+
T Consensus 56 ~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~~~~~~~~------------------------------~~~~~~~~~d 102 (297)
T 3g4e_A 56 VSSVALRQSGG-YVATI--GTKFCALNWKEQSAVVLATVD------------------------------NDKKNNRFND 102 (297)
T ss_dssp EEEEEEBTTSS-EEEEE--TTEEEEEETTTTEEEEEEECC------------------------------TTCSSEEEEE
T ss_pred eEEEEECCCCC-EEEEE--CCeEEEEECCCCcEEEEEecC------------------------------CCCCCCCCCC
Confidence 55566665554 55554 355666666555555554321 0112677999
Q ss_pred eEEcCCCeEEEEeC-----------CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccccccccc
Q 013348 83 LMKSEDDNLLIINR-----------SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSS 151 (444)
Q Consensus 83 L~~d~dG~LYIADa-----------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~ 151 (444)
++++++|.||+++. ...+|+++|++ |.+..+..+...
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~------------------------------- 150 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDI------------------------------- 150 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESB-------------------------------
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeecccc-------------------------------
Confidence 99999999999984 44689999975 666665432110
Q ss_pred ccccCCCcccccccccccCCeEEEEeCCCCeEEEEeC--CCCeEEEee-ecccc-ccCCceeeeeccceeee-ccccc-C
Q 013348 152 CSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNR--ESGVCSNFQ-FSNFA-ILGLPYWFAFPLERVYA-VAGGH-Q 225 (444)
Q Consensus 152 ~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl--~tG~vST~~-fsg~g-~lg~P~~l~~PL~~v~~-~~~~~-~ 225 (444)
+.|+++ ...++.||++|+.+++|.++++ .+|.++.-. |.... ..+.|. +.+.+ .|+.. +
T Consensus 151 --pngi~~-------spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~------g~~~d~~G~lwva 215 (297)
T 3g4e_A 151 --SNGLDW-------SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD------GMCIDAEGKLWVA 215 (297)
T ss_dssp --EEEEEE-------CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE------EEEEBTTSCEEEE
T ss_pred --ccceEE-------cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC------eeEECCCCCEEEE
Confidence 011111 2346679999999999999986 688765321 11111 123333 33332 23332 3
Q ss_pred CcccceeeeeecCCCeeeE
Q 013348 226 GSWTDHIQRCSLLPGRIDI 244 (444)
Q Consensus 226 g~~~~~i~~v~~~pGri~i 244 (444)
.....+|.+++...|++.-
T Consensus 216 ~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EETTTEEEEECTTTCCEEE
T ss_pred EcCCCEEEEEcCCCceEEE
Confidence 3334679999988887653
No 52
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.82 E-value=8.3e-08 Score=92.13 Aligned_cols=128 Identities=10% Similarity=0.137 Sum_probs=88.3
Q ss_pred CcceEEEecCCCEEEEEeCC----CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSE----NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe----NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
.|.||+++++| .+||+.+. +.+|-+++ +|.+..+.... . .+ ...|
T Consensus 18 ~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~-~--------------~~-------------~~~~ 66 (343)
T 2qe8_A 18 APGNITLTPDG-RLFLSLHQFYQPEMQVAELT--QDGLIPFPPQS-G--------------NA-------------IITF 66 (343)
T ss_dssp CEEEEEECTTS-CEEEEECGGGCCSCSEEEEE--TTEEEESCCCC-S--------------SC-------------CCCC
T ss_pred CcceEEECCCC-CEEEEeCCCCCCceEEEEEC--CCCeecCCCcc-c--------------Cc-------------ccce
Confidence 69999999887 69999763 24788887 67665332110 0 00 0128
Q ss_pred CCcceeEEcCCCeEEEEeCC-----CCEEEEEECCCCc-EEEeecCCccceeecceehhhhhhhhhcCCccccccccccc
Q 013348 78 IFPWHLMKSEDDNLLIINRS-----FETLWIMDLASGE-IKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSS 151 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADag-----nh~IrkIDl~tG~-I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~ 151 (444)
.+|.+|+++++|.|||+|.+ .++|+++|+.+|+ +.++.-+.. ..
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~----------------------------- 116 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-IT----------------------------- 116 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TS-----------------------------
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hc-----------------------------
Confidence 99999999999999999998 5999999999998 444432111 00
Q ss_pred ccccCCCcccccccccc--cCCeEEEEeC---CCCeEEEEeCCCCeEEEe
Q 013348 152 CSLKELPYAGLISSSIA--FQNHILLCDI---VGQRIMRLNRESGVCSNF 196 (444)
Q Consensus 152 ~~~~Gip~a~~~Sgla~--~~~~LyIADT---~nhRIRkvdl~tG~vST~ 196 (444)
.+ ...+.+++. .++.+||+|+ .++.|.++|+.+|....+
T Consensus 117 -----~~-~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 117 -----LS-NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp -----CT-TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred -----cc-ccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 00 001223333 3579999999 899999999999887654
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.79 E-value=1.4e-06 Score=80.36 Aligned_cols=177 Identities=11% Similarity=0.112 Sum_probs=111.2
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++|+.|||++..++.|+.+|+.++.+......+.. .. +. ... -.+|.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~------------~~--~~-~~~----------~~~~~ 144 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDR------------KR--TE-EVR----------PLQPR 144 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCC------------CC--CS-SCC----------CCEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCC------------cc--cc-ccC----------CCCCc
Confidence 5899999999999999999999999999998876433222211 00 00 001 34688
Q ss_pred eeEEcCCC-eEEEEeC-CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSEDD-NLLIINR-SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~dG-~LYIADa-gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+++++++| .||+++. .+++|+++|+.++++......... .+.++.
T Consensus 145 ~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------------------------~~~~~~- 191 (353)
T 3vgz_A 145 ELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK--------------------------------MSTGLA- 191 (353)
T ss_dssp EEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT--------------------------------TCCCCE-
T ss_pred eEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC--------------------------------ccceEE-
Confidence 99999885 5999994 578999999999876544321000 001111
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE-eeeccccccCCceeeee-ccceeeecccccCCcccceeeeeec
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN-FQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSL 237 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST-~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~ 237 (444)
+...++.||+++. +++|..+|+.++.+.. +.....+....+..+.+ |-+.. .++.+.....|..+++
T Consensus 192 ------~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 192 ------LDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR----AFITDSKAAEVLVVDT 260 (353)
T ss_dssp ------EETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE----EEEEESSSSEEEEEET
T ss_pred ------ECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE----EEEEeCCCCEEEEEEC
Confidence 1234667999986 6799999999998753 44433333333333332 32221 1123334467888888
Q ss_pred CCCeeeEEEe
Q 013348 238 LPGRIDIKVN 247 (444)
Q Consensus 238 ~pGri~i~v~ 247 (444)
..|++.-.+.
T Consensus 261 ~~~~~~~~~~ 270 (353)
T 3vgz_A 261 RNGNILAKVA 270 (353)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 8887654444
No 54
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.78 E-value=6.3e-07 Score=83.92 Aligned_cols=155 Identities=6% Similarity=-0.020 Sum_probs=102.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
-|.|.+|+++++.||++|..+++|.++|+.++.+.++. . -..|.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~-----------------------------------~~~~~ 57 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-M-----------------------------------DAPVS 57 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-C-----------------------------------SSCEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-C-----------------------------------CCceE
Confidence 36799999988899999999999999999888765431 0 12367
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
+++++++|.|||+. .+.|+++|+++|+++.++...... +. .
T Consensus 58 ~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~------------------------------------~~-~ 98 (297)
T 3g4e_A 58 SVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDK------------------------------------KN-N 98 (297)
T ss_dssp EEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTC------------------------------------SS-E
T ss_pred EEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCC------------------------------------CC-C
Confidence 88999999999998 579999999999998877421100 00 0
Q ss_pred ccccc-cccCCeEEEEeC-----------CCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeec-c--cccCC
Q 013348 162 LISSS-IAFQNHILLCDI-----------VGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAV-A--GGHQG 226 (444)
Q Consensus 162 ~~Sgl-a~~~~~LyIADT-----------~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~-~--~~~~g 226 (444)
.+..+ ...++.||+++. ...+|.+++.. |.+..+. .+ +..|-+.+++. + .++++
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~-~~---------~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYF-DQ---------VDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEE-EE---------ESBEEEEEECTTSCEEEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEe-ec---------cccccceEEcCCCCEEEEec
Confidence 01112 233567999874 34588888875 4444331 11 22333344432 2 33577
Q ss_pred cccceeeeeec--CCCee
Q 013348 227 SWTDHIQRCSL--LPGRI 242 (444)
Q Consensus 227 ~~~~~i~~v~~--~pGri 242 (444)
+..++|..+++ ..|++
T Consensus 168 ~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp GGGTEEEEEEECTTTCCE
T ss_pred CCCCcEEEEeccCCCCcc
Confidence 77888999876 56654
No 55
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.71 E-value=5.6e-07 Score=83.68 Aligned_cols=122 Identities=12% Similarity=0.141 Sum_probs=85.2
Q ss_pred CcceEEEecCCCEEEEEeCCC----CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSEN----HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeN----HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
.|.+++++++| .|||++..+ +.|.++|+.++.+.++.... . . -
T Consensus 88 ~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~---------------------~----------~ 134 (333)
T 2dg1_A 88 NPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-S---------------------T----------A 134 (333)
T ss_dssp SEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-S---------------------S----------C
T ss_pred CcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-c---------------------c----------C
Confidence 57899998887 599998877 78999998777665332110 0 0 3
Q ss_pred CCcceeEEcCCCeEEEEeCC------CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccccccccc
Q 013348 78 IFPWHLMKSEDDNLLIINRS------FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSS 151 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADag------nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~ 151 (444)
+.|.+++++++|.+||++.. +..|+++|++++++..+..+...+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------------------ 184 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA------------------------------ 184 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSE------------------------------
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcc------------------------------
Confidence 46889999999999999985 579999999888887664311100
Q ss_pred ccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCC--CeEEEe
Q 013348 152 CSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRES--GVCSNF 196 (444)
Q Consensus 152 ~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~t--G~vST~ 196 (444)
.++. +...++.||++|+.+++|.++++++ +.+.++
T Consensus 185 ---~~i~-------~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~ 221 (333)
T 2dg1_A 185 ---NGIA-------LSTDEKVLWVTETTANRLHRIALEDDGVTIQPF 221 (333)
T ss_dssp ---EEEE-------ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE
T ss_pred ---cceE-------ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc
Confidence 0111 1123457999999999999999963 344443
No 56
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.69 E-value=9.6e-07 Score=85.68 Aligned_cols=163 Identities=13% Similarity=0.008 Sum_probs=105.6
Q ss_pred CcceEEEecCCCEEEEEeC--CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDS--ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADT--eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|+|+++++++ .||++.. +.+.|++||+.+|.|.--...+. -.+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---------------------------------~~f 67 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDD---------------------------------SYF 67 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCT---------------------------------TCC
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCC---------------------------------Ccc
Confidence 37899999875 8999974 58999999999987654322210 223
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE-EEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI-KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I-~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
+.++++++ +.||+++-.+++++++|++|+++ .++.-|.+. |
T Consensus 68 geGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~-----------------------------------g-- 109 (266)
T 2iwa_A 68 GEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD-----------------------------------G-- 109 (266)
T ss_dssp EEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS-----------------------------------C--
T ss_pred eEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC-----------------------------------e--
Confidence 45777876 79999999999999999999864 333322010 1
Q ss_pred cccccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccccCCceeeeeccceeeeccccc-CCcccceeeeee
Q 013348 159 YAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAILGLPYWFAFPLERVYAVAGGH-QGSWTDHIQRCS 236 (444)
Q Consensus 159 ~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~lg~P~~l~~PL~~v~~~~~~~-~g~~~~~i~~v~ 236 (444)
.+++.+++.||++| ..++|..+|++|..+ .++..... +.|..+ |-+..|..+..+ .-.....|..+|
T Consensus 110 -----~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~---~~p~~~--~nele~~dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 110 -----WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYN---GHRVIR--LNELEYINGEVWANIWQTDCIARIS 178 (266)
T ss_dssp -----CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEET---TEECCC--EEEEEEETTEEEEEETTSSEEEEEE
T ss_pred -----EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCC---Cccccc--ceeEEEECCEEEEecCCCCeEEEEE
Confidence 23455678999999 688999999999664 55543221 112111 111122222221 222245788999
Q ss_pred cCCCeeeEEEe
Q 013348 237 LLPGRIDIKVN 247 (444)
Q Consensus 237 ~~pGri~i~v~ 247 (444)
+.+|++.=++.
T Consensus 179 ~~tg~V~~~I~ 189 (266)
T 2iwa_A 179 AKDGTLLGWIL 189 (266)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99998764433
No 57
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=2.6e-07 Score=84.48 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=82.4
Q ss_pred CcceEEEe----cCCCEEEEEeCCCCeEEEEECC-CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCC
Q 013348 2 RPAASFYH----KDDDCLYIVDSENHAIRRADMG-RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQS 76 (444)
Q Consensus 2 ~P~GIa~D----~~g~~LYVADTeNHaIRkIDl~-tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~ 76 (444)
.|.|++++ ++++.|||+|+.++.|+++|+. +|.+.... . + . . . ....
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~----~-------~--~-~-~-------------~~~~ 224 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK----V-------W--G-H-I-------------PGTH 224 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEE----E-------E--E-E-C-------------CCCS
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccce----E-------E--E-E-C-------------CCCC
Confidence 58899999 8887899999999999999975 45432110 0 0 0 0 0 0000
Q ss_pred CCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcE-EEeecCCccceeecceehhhhhhhhhcCCccccccccccccccc
Q 013348 77 LIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEI-KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLK 155 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I-~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~ 155 (444)
+..|.+++++++|+|||++..+++|+++|+++|++ .++..+..
T Consensus 225 ~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~------------------------------------ 268 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE------------------------------------ 268 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS------------------------------------
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC------------------------------------
Confidence 25689999999999999999999999999987754 22221100
Q ss_pred CCCccccccccc--ccCCeEEEEeCCCCeEEEEeCCC
Q 013348 156 ELPYAGLISSSI--AFQNHILLCDIVGQRIMRLNRES 190 (444)
Q Consensus 156 Gip~a~~~Sgla--~~~~~LyIADT~nhRIRkvdl~t 190 (444)
. +.+++ ..++.|||++..+++|.++++.+
T Consensus 269 -~-----~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 269 -K-----PSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp -C-----EEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred -C-----ceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 0 11112 23445999999999999999864
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.58 E-value=1.2e-06 Score=81.42 Aligned_cols=121 Identities=7% Similarity=0.131 Sum_probs=88.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++|. ||++|+.++.|+++|+.++.+..+... . -..|.
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~~--~--------------------------------~~~~~ 90 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFVS--H--------------------------------KANPA 90 (333)
T ss_dssp CEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEEC--S--------------------------------SSSEE
T ss_pred cccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEeeC--C--------------------------------CCCcc
Confidence 478999998875 999999999999999988877654311 0 23478
Q ss_pred eeEEcCCCeEEEEeCCC----CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 82 HLMKSEDDNLLIINRSF----ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 82 gL~~d~dG~LYIADagn----h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
+++++++|.|||++.++ +.|+++|++++.+.++...... + ..
T Consensus 91 ~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~-----------------------------~~ 136 (333)
T 2dg1_A 91 AIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST-----A-----------------------------YC 136 (333)
T ss_dssp EEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-----C-----------------------------CC
T ss_pred eEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-----C-----------------------------Cc
Confidence 99999999999999887 8999999998887755421100 0 00
Q ss_pred Cccccccccc-ccCCeEEEEeCC------CCeEEEEeCCCCeEEEe
Q 013348 158 PYAGLISSSI-AFQNHILLCDIV------GQRIMRLNRESGVCSNF 196 (444)
Q Consensus 158 p~a~~~Sgla-~~~~~LyIADT~------nhRIRkvdl~tG~vST~ 196 (444)
+..++ ...+.||+++.. +.+|.+++.+++.+..+
T Consensus 137 -----~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 137 -----IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp -----EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred -----ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 11111 235689999875 57899999988877765
No 59
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.55 E-value=7.4e-06 Score=78.49 Aligned_cols=81 Identities=10% Similarity=-0.028 Sum_probs=60.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC-CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG-RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+|.+++++++|+.||++|.+++.|+.+++. +|.+..+.... . + .. -..|
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-~----------------~---~~----------g~~p 195 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD-A----------------P---DP----------GDHP 195 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE-C----------------S---ST----------TCCE
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe-c----------------C---CC----------CCCC
Confidence 588999999999999999999999999987 67654332100 0 0 00 2348
Q ss_pred ceeEEcCCC-eEEEEeCCCCEEEEEE--CCCCcEE
Q 013348 81 WHLMKSEDD-NLLIINRSFETLWIMD--LASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG-~LYIADagnh~IrkID--l~tG~I~ 112 (444)
++++++++| .||+++..+++|..++ ..+|++.
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 899999987 6999998888877765 4477753
No 60
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.54 E-value=1.7e-06 Score=80.87 Aligned_cols=136 Identities=12% Similarity=0.133 Sum_probs=91.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC-CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG-RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.+++++++|+.||+++..++.|+.+++. +|.+..+...... + .|+.. + +....|
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~------------~-~~p~~--~--------~~~~~~ 143 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS------------G-HGPRP--E--------QDGSHI 143 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC------------C-CCSST--T--------CSSCCE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC------------C-CCCCc--c--------ccCCCc
Confidence 689999999999999999999999999984 5555544321100 0 01110 1 126678
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECC-CCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLA-SGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~-tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
..++++++|.||+++.+.++|+.+|+. +|.+..+..-... .+..+.++.
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~-----------------------------~g~~p~~~~- 193 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTME-----------------------------AGFGPRHLV- 193 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECC-----------------------------TTCCEEEEE-
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcC-----------------------------CCCCCceEE-
Confidence 999999998899999999999999998 6776644310000 000011111
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCC--CCeEEEe
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRE--SGVCSNF 196 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~--tG~vST~ 196 (444)
+..+++.||+++..+++|+.++++ +|....+
T Consensus 194 ------~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 194 ------FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp ------ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred ------ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe
Confidence 123455799999999999988877 4776544
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.53 E-value=3.2e-06 Score=77.87 Aligned_cols=122 Identities=10% Similarity=0.088 Sum_probs=89.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++++.||+++. ++.|+.+|+.++.+......+.. | . -..|.
T Consensus 186 ~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~---------------~-----~----------~~~~~ 234 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDD---------------G-----K----------EHFFI 234 (353)
T ss_dssp TCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCS---------------S-----S----------CCCEE
T ss_pred ccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCC---------------C-----C----------Ccccc
Confidence 4889999999999999987 78999999998876644333211 0 1 34578
Q ss_pred eeEEcCCC-eEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDD-NLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG-~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+++++++| .||+++...++|+.+|+.+|++...... +.. .++.
T Consensus 235 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~---------------------------------~~~~-- 278 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA-PES---------------------------------LAVL-- 278 (353)
T ss_dssp EEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC-SSC---------------------------------CCEE--
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-CCC---------------------------------ceEE--
Confidence 89999876 4999999999999999999886543321 000 0111
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
+...++.||+++..+++|..+|+.++.+..
T Consensus 279 -----~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 279 -----FNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp -----EETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----ECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 123456799999999999999999988654
No 62
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.50 E-value=1.2e-05 Score=77.35 Aligned_cols=161 Identities=16% Similarity=0.140 Sum_probs=105.1
Q ss_pred ceEEEecCCCEEEEEeCC--CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 4 AASFYHKDDDCLYIVDSE--NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTe--NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|++|+. +.||++-.. ++.||++|+.+|.|.--..-+. -.++-
T Consensus 24 qGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---------------------------------~~fge 68 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---------------------------------PYFGA 68 (243)
T ss_dssp EEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---------------------------------TCCEE
T ss_pred ccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---------------------------------Cccee
Confidence 6999974 589999554 6899999999997753222110 11234
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcE-EEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEI-KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I-~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
|+++++ +.||+++-.+++++++|++|+++ .++.-+.. |
T Consensus 69 Gi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~------------------------------------G---- 107 (243)
T 3mbr_X 69 GIVAWR-DRLIQLTWRNHEGFVYDLATLTPRARFRYPGE------------------------------------G---- 107 (243)
T ss_dssp EEEEET-TEEEEEESSSSEEEEEETTTTEEEEEEECSSC------------------------------------C----
T ss_pred EEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC------------------------------------c----
Confidence 667776 79999999999999999999864 34432110 1
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccccCCceeeeeccceeeecccccCCc-ccceeeeeecC
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAILGLPYWFAFPLERVYAVAGGHQGS-WTDHIQRCSLL 238 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~-~~~~i~~v~~~ 238 (444)
-+++..++.||++| .+.+|..+|++|..+ .+|..... +.|..+-.=|+ |..|..+... ..+.|..+|+.
T Consensus 108 ---wglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~---g~~~~~lNeLe--~~~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 108 ---WALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAG---GRPLDNLNELE--WVNGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp ---CEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEET---TEECCCEEEEE--EETTEEEEEETTTTEEEEECTT
T ss_pred ---eEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccC---CcccccceeeE--EeCCEEEEEECCCCeEEEEECC
Confidence 13455678999999 589999999998765 55543221 22222211122 3333222222 24689999999
Q ss_pred CCeeeEEEeee
Q 013348 239 PGRIDIKVNVD 249 (444)
Q Consensus 239 pGri~i~v~v~ 249 (444)
+|+|.=.+++.
T Consensus 179 tG~V~~~idl~ 189 (243)
T 3mbr_X 179 SGKVVAWIDLQ 189 (243)
T ss_dssp TCBEEEEEECG
T ss_pred CCCEEEEEECC
Confidence 99987555443
No 63
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.48 E-value=1.1e-06 Score=86.37 Aligned_cols=79 Identities=11% Similarity=-0.012 Sum_probs=56.5
Q ss_pred CcceEEEecC---CCEEEEEeCCC-----CeEEEEECCCCeEE---EeccCCCcCccCCcchhhhhcccCcccccCcccc
Q 013348 2 RPAASFYHKD---DDCLYIVDSEN-----HAIRRADMGRRVLE---TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSE 70 (444)
Q Consensus 2 ~P~GIa~D~~---g~~LYVADTeN-----HaIRkIDl~tg~Vt---TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~ 70 (444)
.|.||+++++ ++.|||+++.+ ++|.++++..+.++ ++.-. . +.....
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~--~----------------p~~~~~---- 133 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDG--I----------------PARPHG---- 133 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEE--E----------------CCCTTC----
T ss_pred CceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEe--C----------------CCCCCC----
Confidence 6999999998 66999999976 89999998655332 22110 0 000011
Q ss_pred CCCCCCCCCcceeEEcCCCeEEEEeC-------------CCCEEEEEECCC
Q 013348 71 KLDPQSLIFPWHLMKSEDDNLLIINR-------------SFETLWIMDLAS 108 (444)
Q Consensus 71 ~~~~~~Ln~P~gL~~d~dG~LYIADa-------------gnh~IrkIDl~t 108 (444)
..+|.+|+++++|.|||++. ...+|++||++.
T Consensus 134 ------~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 134 ------LHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp ------CCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred ------CcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 66788999999999999973 236999999863
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.47 E-value=2.9e-06 Score=78.10 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=91.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeE----EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVL----ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V----tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
.|.+++++++|+.||+++..++.|+.+|+.++.+ .++.. -
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~------------------------------------~ 220 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT------------------------------------N 220 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC------------------------------------S
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC------------------------------------C
Confidence 5889999999989999999999999999987653 22211 1
Q ss_pred CCcceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccC
Q 013348 78 IFPWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKE 156 (444)
Q Consensus 78 n~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~G 156 (444)
..|.+++++++|. ||++..+.+.|+.+|+.+|+++.+.. ........+. + .....+
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~---------------~-------~~~~~~ 277 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKS-FGHGLLIDPR---------------P-------LFGANQ 277 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEE-EECCCCCCCG---------------G-------GTTCCC
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecc-cccccccCCC---------------C-------cccccc
Confidence 3467888998876 99999999999999999998866542 1100000000 0 000000
Q ss_pred CCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEe
Q 013348 157 LPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNF 196 (444)
Q Consensus 157 ip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~ 196 (444)
+ .+...+..||++...++.|..+++++..+..+
T Consensus 278 ~-------~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 278 M-------ALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp E-------EECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred e-------EECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 1 12345678999999999999999999888776
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.47 E-value=1.4e-05 Score=74.76 Aligned_cols=186 Identities=13% Similarity=0.128 Sum_probs=106.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC-CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG-RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+|.+++++++|+ ||+++..++.|+.+++. +|.+..+.... . .. -..|
T Consensus 142 ~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~--------------------~~----------g~~p 189 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLT-M--------------------EA----------GFGP 189 (347)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEE-C--------------------CT----------TCCE
T ss_pred CceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEE-c--------------------CC----------CCCC
Confidence 477899999998 99999999999999987 56554432110 0 00 2347
Q ss_pred ceeEEcCCCe-EEEEeCCCCEEEEEECC--CCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 81 WHLMKSEDDN-LLIINRSFETLWIMDLA--SGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 81 ~gL~~d~dG~-LYIADagnh~IrkIDl~--tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
.+++++++|. ||+++...++|+.++++ +|+++.+.. .... +..+
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~-~~~~------------------~~~~-------------- 236 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI-VKTI------------------PADY-------------- 236 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE-EESS------------------CTTC--------------
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee-eeec------------------CCCC--------------
Confidence 8899999987 99999999998888766 576654331 0000 0000
Q ss_pred Cccccccc--ccccCCeEEEEeCCCCeEEEEeCC-CCeEEEeeeccccccCCceeeee-ccceeeecccccCCcccceee
Q 013348 158 PYAGLISS--SIAFQNHILLCDIVGQRIMRLNRE-SGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQ 233 (444)
Q Consensus 158 p~a~~~Sg--la~~~~~LyIADT~nhRIRkvdl~-tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~ 233 (444)
+....+.+ +..++..||+++..+++|..++++ +|....++....+ -..|..+.+ |-+... +.++.....+.
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~l----~v~~~~~~~v~ 311 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAFV----VVVNQNTDNAT 311 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSEE----EEEETTTTEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCEE----EEEEcCCCcEE
Confidence 00001112 123456799999999999999986 4444444311110 123444443 433211 11222223444
Q ss_pred ee--ecCCCeee-EEEeeeCCCCcccc
Q 013348 234 RC--SLLPGRID-IKVNVDIPSDTELV 257 (444)
Q Consensus 234 ~v--~~~pGri~-i~v~v~~P~~~el~ 257 (444)
-+ +...|++. +.-.+.+|..+.+.
T Consensus 312 v~~~d~~tg~l~~~~~~~~~p~p~~~~ 338 (347)
T 3hfq_A 312 LYARDLTSGKLSLLQKDVTVPEGVCVR 338 (347)
T ss_dssp EEEECTTTCCEEEEEEEEECTTEEEEE
T ss_pred EEEEeCCCCeEEecccceecCCCcEEE
Confidence 44 66677765 22335666555443
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=3.6e-06 Score=82.40 Aligned_cols=159 Identities=11% Similarity=0.068 Sum_probs=105.1
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
+||.++ ++.||++...+..||++|+.+|.|.--. .+. =.+.-|+
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---------------------------------~~FgeGi 101 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLG---------------------------------NIFAEGL 101 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT---------------------------------TCCEEEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC---------------------------------CcceeEE
Confidence 799996 4689999999999999999988652211 110 1123467
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEE-EeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcccc
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIK-EAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGL 162 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~-TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~ 162 (444)
++++ +.||+++-.+++++++|++|+++. ++.-+ + .|
T Consensus 102 t~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~-----------------------------------eG------ 138 (268)
T 3nok_A 102 ASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYS-G-----------------------------------EG------ 138 (268)
T ss_dssp EECS-SCEEEEESSSCEEEEEETTTTEEEEEEECS-S-----------------------------------CC------
T ss_pred EEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCC-C-----------------------------------ce------
Confidence 7776 799999999999999999998653 33311 0 01
Q ss_pred cccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccccCCceeeeeccceeeecccccCCcc-cceeeeeecCCC
Q 013348 163 ISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAILGLPYWFAFPLERVYAVAGGHQGSW-TDHIQRCSLLPG 240 (444)
Q Consensus 163 ~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~~-~~~i~~v~~~pG 240 (444)
.+++.+++.||++| ...+|..+|++|..+ .+|..... +.|..+ +-|..|..|..+...+ ...|..+|+.+|
T Consensus 139 -wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~---g~~v~~--lNeLe~~dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 139 -WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLR---GQPVEL--INELECANGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp -CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEET---TEECCC--EEEEEEETTEEEEEETTCSEEEEECTTTC
T ss_pred -eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCC---Cccccc--ccccEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 23456688999999 599999999999765 45543221 112111 1112233333333332 468999999999
Q ss_pred eeeEEEee
Q 013348 241 RIDIKVNV 248 (444)
Q Consensus 241 ri~i~v~v 248 (444)
+|.=++++
T Consensus 212 ~V~~~Idl 219 (268)
T 3nok_A 212 TVVGVIDA 219 (268)
T ss_dssp BEEEEEEC
T ss_pred cEEEEEEC
Confidence 98755554
No 67
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.46 E-value=5e-06 Score=76.53 Aligned_cols=124 Identities=13% Similarity=0.111 Sum_probs=86.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCe-EEEEECCC-CeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHA-IRRADMGR-RVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHa-IRkIDl~t-g~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|.+++++++|+.||+++..++. |+..++.. |.+...... . ... -..
T Consensus 129 ~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~--~-------------------~~~----------~~~ 177 (331)
T 3u4y_A 129 DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE--F-------------------ISG----------GTR 177 (331)
T ss_dssp TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE--E-------------------ECS----------SSS
T ss_pred CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc--c-------------------ccC----------CCC
Confidence 58899999999889999999888 88888653 222111100 0 000 234
Q ss_pred cceeEEcCCCe-EEEEeCCCCEEEEEECCCCcE----EEeecCCccceeecceehhhhhhhhhcCCcccccccccccccc
Q 013348 80 PWHLMKSEDDN-LLIINRSFETLWIMDLASGEI----KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSL 154 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I----~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~ 154 (444)
|.+++++++|. ||+++..+++|+.+|+.+|++ .++..+ . .+
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~---------------------------------~~ 223 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-N---------------------------------LP 223 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-S---------------------------------CC
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-C---------------------------------CC
Confidence 78999999886 999999999999999998874 333221 0 00
Q ss_pred cCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 155 KELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 155 ~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
.++. +...+..||++....+.|..+|+++|.+..++
T Consensus 224 ~~~~-------~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 224 GTIV-------VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp CCEE-------ECTTSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred ceEE-------ECCCCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 0111 12345679999998899999999999987764
No 68
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.42 E-value=6.6e-06 Score=82.83 Aligned_cols=215 Identities=13% Similarity=0.082 Sum_probs=129.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
-|.|++||+..+.|||.|-.++.|-++|+..+.+..+.=.+.. ..|. . ...|.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s-------------~~g~----~----------~~~~s 66 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGAS-------------SNGD----G----------EQQMS 66 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTC-------------CSSC----C----------SEEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCcc-------------ccCC----C----------cceee
Confidence 5899999998889999999999999999986765544110000 0011 1 55678
Q ss_pred eeEE---cCCCeEEE-EeC------------CCCEEEEEECC---CCcEEEeecCCccceeecceehhhhhhhhhcCCcc
Q 013348 82 HLMK---SEDDNLLI-INR------------SFETLWIMDLA---SGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQD 142 (444)
Q Consensus 82 gL~~---d~dG~LYI-ADa------------gnh~IrkIDl~---tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~ 142 (444)
||.+ |++|.||| +|+ +.+.+.++|+. ||+....+. .....+.+ .+.
T Consensus 67 Gl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~d-L~~~~~~~-----~~~--------- 131 (334)
T 2p9w_A 67 GLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVN-FEKVQDEF-----EKK--------- 131 (334)
T ss_dssp EEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEE-SHHHHHHH-----HHH---------
T ss_pred EEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEec-Cccccccc-----ccc---------
Confidence 9999 67799999 663 57999999999 887665553 11110000 000
Q ss_pred cccccccccccccCCCccccccccc-ccCCeEEEEeCCC-CeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeeec
Q 013348 143 WLLHQIDSSCSLKELPYAGLISSSI-AFQNHILLCDIVG-QRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYAV 220 (444)
Q Consensus 143 ~~~~~~~~~~~~~Gip~a~~~Sgla-~~~~~LyIADT~n-hRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~~ 220 (444)
. |..+. .+..++ +.++++||+|+.. ..|.||++++..++.+..+. ..+.....|-+++|..
T Consensus 132 -------~-----g~~~~-~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~----~~~~~~~G~nGIv~~p 194 (334)
T 2p9w_A 132 -------A-----GKRPF-GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES----GNGGQRPGYSGITFDP 194 (334)
T ss_dssp -------H-----SSCCE-EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC----CCSSSCCSCSEEEEET
T ss_pred -------c-----ccccc-CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC----CCcccccCcceEEEeC
Confidence 0 10110 012222 4578999999999 99999999988777663221 0111223355777763
Q ss_pred -cc-c-cCCcccceeeeeecCCCeee--EEEe-------eeCCCCcccccccccceeeeeeccceeeeec
Q 013348 221 -AG-G-HQGSWTDHIQRCSLLPGRID--IKVN-------VDIPSDTELVESLQEGCIWRQARGTASVVLR 278 (444)
Q Consensus 221 -~~-~-~~g~~~~~i~~v~~~pGri~--i~v~-------v~~P~~~el~~p~~e~ciwrq~rg~~~~~~~ 278 (444)
|+ + ..++ .++|-+|++. -.+. |.+. ...|.++ |.....-.|+-=.....++.+..
T Consensus 195 dg~~Liv~~~-~g~L~~fD~~-~pv~~~v~~~~~G~~~~~~~~dgi-lp~~~~G~vllV~~~~~~~~~l~ 261 (334)
T 2p9w_A 195 HSNKLIAFGG-PRALTAFDVS-KPYAWPEPVKINGDFGTLSGTEKI-VTVPVGNESVLVGARAPYAISFR 261 (334)
T ss_dssp TTTEEEEESS-SSSEEEEECS-SSSCCCEECEESSCCCCCTTEEEE-EEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEcC-CCeEEEEcCC-CCcceeecccccCCcccccCcccc-cccccCCEEEEEEcCCCCEEEEE
Confidence 32 2 3666 8999999876 3444 4443 2344454 44444555544444444443333
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.41 E-value=5e-06 Score=78.36 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=89.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++|+.||+++..++.|+.+++.+|.+..+...... + .. ...|.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~----------------~---~~----------~~~~~ 262 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD----------------T---VN----------AQGSG 262 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC----------------S---SC----------CCCEE
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC----------------C---CC----------CCCcc
Confidence 5789999999999999999999999999888876554321100 0 01 55678
Q ss_pred eeEEcCCCe-EEEEeCC-CCEEEEEEC--CCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 82 HLMKSEDDN-LLIINRS-FETLWIMDL--ASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 82 gL~~d~dG~-LYIADag-nh~IrkIDl--~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
+++++++|. ||+++.+ .++|+.+++ .+|.++.+.. .+. | ..+.++
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~-~~~-----g-------------------------~~~~~~ 311 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGY-QLT-----G-------------------------IHPRNF 311 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEE-EEC-----S-------------------------SCCCEE
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeE-ecC-----C-------------------------CCCceE
Confidence 999999875 9999999 888888776 4777654432 000 0 000011
Q ss_pred CcccccccccccCCeEEEEeCCCCeEEE--EeCCCCeEEEe
Q 013348 158 PYAGLISSSIAFQNHILLCDIVGQRIMR--LNRESGVCSNF 196 (444)
Q Consensus 158 p~a~~~Sgla~~~~~LyIADT~nhRIRk--vdl~tG~vST~ 196 (444)
. +...++.||+++..+++|.. +|+++|.+..+
T Consensus 312 ~-------~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 312 I-------ITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp E-------ECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred E-------ECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 1 12346679999988888877 78889988765
No 70
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.41 E-value=1e-05 Score=77.89 Aligned_cols=159 Identities=13% Similarity=0.014 Sum_probs=106.5
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
.|+++ .++.||+++-.++.+.++|+.+..+ .|+.-. ..+|+
T Consensus 68 eGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~------------------------------------~~Gwg 109 (243)
T 3mbr_X 68 AGIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFRYP------------------------------------GEGWA 109 (243)
T ss_dssp EEEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEECS------------------------------------SCCCE
T ss_pred eEEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC------------------------------------CCceE
Confidence 46666 5678999999999999999988754 333211 13688
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEE-EeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIK-EAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~-TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
|+.++ +.||++| +.++|+.+|+.|.++. ++.=+. . |.|..
T Consensus 110 lt~dg-~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~------~------------------------------g~~~~- 150 (243)
T 3mbr_X 110 LTSDD-SHLYMSD-GTAVIRKLDPDTLQQVGSIKVTA------G------------------------------GRPLD- 150 (243)
T ss_dssp EEECS-SCEEEEC-SSSEEEEECTTTCCEEEEEECEE------T------------------------------TEECC-
T ss_pred EeeCC-CEEEEEC-CCCeEEEEeCCCCeEEEEEEEcc------C------------------------------Ccccc-
Confidence 88776 7999999 6899999999998654 332110 0 11110
Q ss_pred ccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccc-cCC--ceeeeeccceeeecc---cccCCcccceeee
Q 013348 162 LISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAI-LGL--PYWFAFPLERVYAVA---GGHQGSWTDHIQR 234 (444)
Q Consensus 162 ~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~-lg~--P~~l~~PL~~v~~~~---~~~~g~~~~~i~~ 234 (444)
.+..|...++.||+..-....|.+||++||.+ .+|.++++-. ... +.....|=+++|+.. .++.|.+=.++=+
T Consensus 151 ~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~ 230 (243)
T 3mbr_X 151 NLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYE 230 (243)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred cceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEE
Confidence 01223345788999998899999999999998 5566665421 111 223456667788754 3458887777777
Q ss_pred eecCC
Q 013348 235 CSLLP 239 (444)
Q Consensus 235 v~~~p 239 (444)
|.+.|
T Consensus 231 v~~~~ 235 (243)
T 3mbr_X 231 IRLTP 235 (243)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 76543
No 71
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.39 E-value=1.9e-05 Score=74.43 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=101.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCe-------EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRV-------LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDP 74 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-------VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~ 74 (444)
+|++++++++|+.||+++.+++.|+.+++.... +... |.... ...
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~-~~~~~-----------------~~~---------- 207 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK-GTPEA-----------------FKV---------- 207 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE-EEEEE-----------------EEC----------
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec-ccccc-----------------eec----------
Confidence 458899999999999999999999999865321 2111 00000 000
Q ss_pred CCCCCcceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 75 QSLIFPWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 75 ~~Ln~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
..-..|.+++++++|. ||+++...++|+.+|+.+|.++.+..- ... +. ....
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~-~~~------------------~~--------~~~~ 260 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV-AAD------------------TV--------NAQG 260 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE-ESC------------------SS--------CCCC
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE-ecC------------------CC--------CCCC
Confidence 0034588999999875 999999999999999988877654420 000 00 0000
Q ss_pred ccCCCcccccccccccCCeEEEEeCC-CCeEEEEeC--CCCeEEEeeeccccccCCceeeee-ccceeeecccccCCccc
Q 013348 154 LKELPYAGLISSSIAFQNHILLCDIV-GQRIMRLNR--ESGVCSNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGSWT 229 (444)
Q Consensus 154 ~~Gip~a~~~Sgla~~~~~LyIADT~-nhRIRkvdl--~tG~vST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~ 229 (444)
+.++. +..++..||+++.. .++|+.+++ .+|....++....| ..|..+.+ |-+...-. ++...
T Consensus 261 ~~~i~-------~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g--~~~~~~~~spdg~~l~~----~~~~~ 327 (361)
T 3scy_A 261 SGDIH-------LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG--IHPRNFIITPNGKYLLV----ACRDT 327 (361)
T ss_dssp EEEEE-------ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS--SCCCEEEECTTSCEEEE----EETTT
T ss_pred cccEE-------ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC--CCCceEEECCCCCEEEE----EECCC
Confidence 00111 12356679999998 888888776 47776655422212 34444443 43331111 22222
Q ss_pred ceeee--eecCCCeee
Q 013348 230 DHIQR--CSLLPGRID 243 (444)
Q Consensus 230 ~~i~~--v~~~pGri~ 243 (444)
..|.- ++...|++.
T Consensus 328 ~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 328 NVIQIFERDQATGLLT 343 (361)
T ss_dssp TEEEEEEECTTTCCEE
T ss_pred CCEEEEEEECCCCcEe
Confidence 33433 566777665
No 72
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.31 E-value=2.3e-05 Score=76.45 Aligned_cols=160 Identities=12% Similarity=0.051 Sum_probs=102.8
Q ss_pred ceEEEecCCCEEEEEeCC--CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 4 AASFYHKDDDCLYIVDSE--NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTe--NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+||.|+ + +.||++... ++.||++|+.+|.|.--..-+. =.+.-
T Consensus 46 qGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---------------------------------~~Fge 90 (262)
T 3nol_A 46 EGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK---------------------------------RYFGE 90 (262)
T ss_dssp EEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT---------------------------------TCCEE
T ss_pred ceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCC---------------------------------cccee
Confidence 899997 4 489999865 5699999999997643221110 11334
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEE-EeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIK-EAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~-TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
||++++ +.||+++-.+++++++|++|+++. ++.-+. .|
T Consensus 91 Git~~g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~------------------------------------eG---- 129 (262)
T 3nol_A 91 GISDWK-DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG------------------------------------EG---- 129 (262)
T ss_dssp EEEEET-TEEEEEESSSSEEEEEETTTCCEEEEEECSS------------------------------------CC----
T ss_pred EEEEeC-CEEEEEEeeCCEEEEEECccCcEEEEEECCC------------------------------------Cc----
Confidence 677776 799999999999999999998643 343210 01
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccccCCceeeeeccceeeecccccCCc-ccceeeeeecC
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAILGLPYWFAFPLERVYAVAGGHQGS-WTDHIQRCSLL 238 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~-~~~~i~~v~~~ 238 (444)
-+++.+++.||++| +..+|..+|++|..+ .+|..... |.|...-.-|+ |..|..+... ....|.++|+.
T Consensus 130 ---~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~---g~~~~~lNELe--~~~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 130 ---WGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAH---GEELPELNELE--WVDGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp ---CCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECEET---TEECCCEEEEE--EETTEEEEEETTSSEEEEECTT
T ss_pred ---eEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccC---CccccccceeE--EECCEEEEEEccCCeEEEEECC
Confidence 13455678899999 588999999998655 55543221 12211100122 2223222222 24689999999
Q ss_pred CCeeeEEEee
Q 013348 239 PGRIDIKVNV 248 (444)
Q Consensus 239 pGri~i~v~v 248 (444)
+|+|.=.+.+
T Consensus 201 tG~V~~~Id~ 210 (262)
T 3nol_A 201 TGKVTGIIDL 210 (262)
T ss_dssp TCBEEEEEEC
T ss_pred CCcEEEEEEC
Confidence 9998755443
No 73
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.29 E-value=1.5e-05 Score=77.26 Aligned_cols=160 Identities=10% Similarity=-0.032 Sum_probs=106.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+.|++++ ++.||+++-.++.|-.+|..++.+ .++. .| . ..+|
T Consensus 68 geGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~-~g-~---------------------------------~~g~ 110 (266)
T 2iwa_A 68 GEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFT-HQ-M---------------------------------KDGW 110 (266)
T ss_dssp EEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEE-CC-S---------------------------------SSCC
T ss_pred eEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEE-CC-C---------------------------------CCeE
Confidence 4577775 568999999999999999988754 3432 11 1 1257
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEE-EeecCC-ccceeecceehhhhhhhhhcCCcccccccccccccccCCCc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIK-EAVKGF-SKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPY 159 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~-TiagG~-~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~ 159 (444)
+|+.++ +.||++| +.++|+.||++|.++. ++.=|. +++. ..
T Consensus 111 glt~Dg-~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~---------------------------------~~-- 153 (266)
T 2iwa_A 111 GLATDG-KILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRV---------------------------------IR-- 153 (266)
T ss_dssp EEEECS-SSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEEC---------------------------------CC--
T ss_pred EEEECC-CEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccc---------------------------------cc--
Confidence 777776 7899999 7899999999997653 333111 1110 00
Q ss_pred ccccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccc----cCCceeeeeccceeeecc---cccCCcccce
Q 013348 160 AGLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAI----LGLPYWFAFPLERVYAVA---GGHQGSWTDH 231 (444)
Q Consensus 160 a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~----lg~P~~l~~PL~~v~~~~---~~~~g~~~~~ 231 (444)
+..+...++.||++.-..+.|.+||++||.+ .+|.+++... -+.| ....|-+++|+.. .++.+....+
T Consensus 154 ---~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~-~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 154 ---LNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFR-DIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp ---EEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT-TCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred ---ceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccccccc-ccCceEEEEEcCCCCEEEEECCCCCe
Confidence 1222223678999998899999999999976 6666654311 1111 1245566677654 3458888888
Q ss_pred eeeeecCCC
Q 013348 232 IQRCSLLPG 240 (444)
Q Consensus 232 i~~v~~~pG 240 (444)
+-.|++.+.
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888877554
No 74
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.28 E-value=5.8e-06 Score=81.13 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=55.4
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
++|.|+++|++++.||++|.+++.++. ...-.|..+...+.. ||-. ..|.........+.+.-.....|
T Consensus 202 rnp~g~a~d~~~g~l~v~d~g~~~~~~--~~~dei~~i~~G~ny--------Gwp~-~~g~~~~~~~~~p~~~~~~~~ap 270 (352)
T 2ism_A 202 RNPQGLAWHPKTGELFSSEHGPSGEQG--YGHDEVNLIVPGGNY--------GWPR-VVGRGNDPRYRDPLYFWPQGFPP 270 (352)
T ss_dssp SEECCCEECTTTCCEEEEEECC--------CCCEEEEECTTCBC--------CTTT-CCSCCCCTTSCCCSEECTTCCCE
T ss_pred CCcccEEEECCCCCEEEEEcCCCCCCC--CCCeEEEEeccCCcC--------CCCc-ccCCCCCCCCcCCeEecCCCCCC
Confidence 469999999955579999999998764 223345555322211 3321 11110000001111111224579
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
.++++.. |.|||++..+++|++++++++
T Consensus 271 ~G~~~~~-G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 271 GNLAFFR-GDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp EEEEEET-TEEEEEETTTTEEEEEEEEEE
T ss_pred cceEEEC-CEEEEEECCCCEEEEEEECCC
Confidence 9999965 999999999999999998643
No 75
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.28 E-value=2e-05 Score=76.87 Aligned_cols=157 Identities=12% Similarity=0.015 Sum_probs=103.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
.|+++ .++.||+++-.++.+-++|+.++.+ .++.=. .++|+
T Consensus 90 eGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~------------------------------------~eG~g 131 (262)
T 3nol_A 90 EGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD------------------------------------GEGWG 131 (262)
T ss_dssp EEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECS------------------------------------SCCCC
T ss_pred eEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECC------------------------------------CCceE
Confidence 45677 4678999999999999999987654 333211 13578
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEE-EeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIK-EAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~-TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
++.++ +.||++| +.++|+.+|+.|.++. ++.-+. .|. |+ .
T Consensus 132 lt~dg-~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~------~g~------------------------------~~-~ 172 (262)
T 3nol_A 132 LTHND-QYLIMSD-GTPVLRFLDPESLTPVRTITVTA------HGE------------------------------EL-P 172 (262)
T ss_dssp EEECS-SCEEECC-SSSEEEEECTTTCSEEEEEECEE------TTE------------------------------EC-C
T ss_pred EecCC-CEEEEEC-CCCeEEEEcCCCCeEEEEEEecc------CCc------------------------------cc-c
Confidence 88776 7999999 5899999999997654 332110 010 10 0
Q ss_pred ccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccc-cC-Cceeeeeccceeeecc---cccCCcccceeeee
Q 013348 162 LISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAI-LG-LPYWFAFPLERVYAVA---GGHQGSWTDHIQRC 235 (444)
Q Consensus 162 ~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~-lg-~P~~l~~PL~~v~~~~---~~~~g~~~~~i~~v 235 (444)
.++.+...++.||+..-....|.+||++||.+ .+|.++++-. .. .+-....|=+++|+.. .++.|.+=-++=+|
T Consensus 173 ~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 173 ELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp CEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred ccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 01222334678999999999999999999998 5566666421 11 1223455667777654 34577777777666
Q ss_pred ec
Q 013348 236 SL 237 (444)
Q Consensus 236 ~~ 237 (444)
.+
T Consensus 253 ~~ 254 (262)
T 3nol_A 253 TL 254 (262)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 76
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.26 E-value=1.8e-05 Score=77.46 Aligned_cols=156 Identities=12% Similarity=-0.026 Sum_probs=103.0
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
.|+++ .++.||+++-.++.+.++|..++.+. ++.-. ..+|+
T Consensus 99 eGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~------------------------------------~eGwG 140 (268)
T 3nok_A 99 EGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS------------------------------------GEGWG 140 (268)
T ss_dssp EEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS------------------------------------SCCCC
T ss_pred eEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC------------------------------------CceeE
Confidence 45777 56789999999999999999887543 33211 13578
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEE-eecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKE-AVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~T-iagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
|+.++ +.||++| +.++|+.+|++|.++.. +.=+. .| .|. .
T Consensus 141 Lt~Dg-~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~------~g------------------------------~~v-~ 181 (268)
T 3nok_A 141 LCYWN-GKLVRSD-GGTMLTFHEPDGFALVGAVQVKL------RG------------------------------QPV-E 181 (268)
T ss_dssp EEEET-TEEEEEC-SSSEEEEECTTTCCEEEEEECEE------TT------------------------------EEC-C
T ss_pred EecCC-CEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC------CC------------------------------ccc-c
Confidence 88877 7999999 69999999999987642 32110 00 010 0
Q ss_pred ccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEeeeccccc-cC--Cceeeeeccceeeecc---cccCCcccceeee
Q 013348 162 LISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQFSNFAI-LG--LPYWFAFPLERVYAVA---GGHQGSWTDHIQR 234 (444)
Q Consensus 162 ~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~fsg~g~-lg--~P~~l~~PL~~v~~~~---~~~~g~~~~~i~~ 234 (444)
.+..|...++.||+..-....|.+||++||.+ .+|.++++-. .. .+.....|=+++|+.. .++.|.+=-++-+
T Consensus 182 ~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~e 261 (268)
T 3nok_A 182 LINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFE 261 (268)
T ss_dssp CEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEE
T ss_pred cccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEE
Confidence 01223344779999998999999999999987 6666665321 11 1122345666777654 3357766666655
Q ss_pred ee
Q 013348 235 CS 236 (444)
Q Consensus 235 v~ 236 (444)
|.
T Consensus 262 v~ 263 (268)
T 3nok_A 262 VR 263 (268)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 77
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.26 E-value=5.6e-06 Score=83.36 Aligned_cols=132 Identities=5% Similarity=-0.005 Sum_probs=84.8
Q ss_pred CcceEEE---ecCCCEEEE-EeC------------CCCeEEEEECC---CCeEEEeccCCCcCccCCcchhhhhcccCcc
Q 013348 2 RPAASFY---HKDDDCLYI-VDS------------ENHAIRRADMG---RRVLETVYPTSGISKKNNSLWAWIMEKLGFE 62 (444)
Q Consensus 2 ~P~GIa~---D~~g~~LYV-ADT------------eNHaIRkIDl~---tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a 62 (444)
+|+||.+ |+.+ .|+| +|+ +.+.|.++|+. ++.+...+.-... .. +|. ...|
T Consensus 64 ~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~--~~----~~~-~~~g-- 133 (334)
T 2p9w_A 64 QMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKV--QD----EFE-KKAG-- 133 (334)
T ss_dssp EEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHH--HH----HHH-HHHS--
T ss_pred eeeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccc--cc----ccc-cccc--
Confidence 5899999 7885 7887 673 57999999998 6655554432100 00 000 0000
Q ss_pred cccCccccCCCCCCCCCcceeEEcCCCeEEEEeCCC-CEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCc
Q 013348 63 RDNDTKSEKLDPQSLIFPWHLMKSEDDNLLIINRSF-ETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQ 141 (444)
Q Consensus 63 ~~a~~~~~~~~~~~Ln~P~gL~~d~dG~LYIADagn-h~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~ 141 (444)
+.+..|.++++|.+|+.||+|+.. ..|+|++++...+..+..-.+..
T Consensus 134 ------------~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~-------------------- 181 (334)
T 2p9w_A 134 ------------KRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNG-------------------- 181 (334)
T ss_dssp ------------SCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCS--------------------
T ss_pred ------------ccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCc--------------------
Confidence 014568899999999999999999 99999999744455443211100
Q ss_pred ccccccccccccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCC
Q 013348 142 DWLLHQIDSSCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRES 190 (444)
Q Consensus 142 ~~~~~~~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~t 190 (444)
....++.|+++ ...++.|+++++ ++++.++|+++
T Consensus 182 -------~~~~G~nGIv~-------~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 182 -------GQRPGYSGITF-------DPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp -------SSCCSCSEEEE-------ETTTTEEEEESS-SSSEEEEECSS
T ss_pred -------ccccCcceEEE-------eCCCCEEEEEcC-CCeEEEEcCCC
Confidence 01122223332 124668999999 99999999984
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.25 E-value=0.00013 Score=68.68 Aligned_cols=120 Identities=16% Similarity=0.196 Sum_probs=86.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.++++++++..||++...++.|+.+|+.++.+......+ ..|.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-----------------------------------~~v~ 77 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-----------------------------------SSPQ 77 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-----------------------------------SSEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-----------------------------------CCcc
Confidence 47889999999899999999999999999887654322111 1356
Q ss_pred eeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+++++++|. ||++....+.|+.+|+.++++.........+. ++.
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~---------------------------------~~~-- 122 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL---------------------------------GLA-- 122 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE---------------------------------EEE--
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcc---------------------------------eEE--
Confidence 788888765 88999999999999999987654442111110 000
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEe
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNF 196 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~ 196 (444)
+...++.||++....+.|+.+|+.++.+...
T Consensus 123 -----~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 123 -----LSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp -----ECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -----ECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 1223557889999999999999999876543
No 79
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.25 E-value=5.6e-05 Score=71.21 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=85.5
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++++.||++...++.|+.+|+.++.+...... -..|.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-----------------------------------~~~~~ 119 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-----------------------------------GKSPL 119 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------------------------------SSSEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-----------------------------------CCCcc
Confidence 4788999999999999999999999999988765433221 11256
Q ss_pred eeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 82 HLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 82 gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
+++++++|. ||++....++|+.+|+.++++.........+. .+.
T Consensus 120 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~---------------------------------~~~-- 164 (391)
T 1l0q_A 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPK---------------------------------GIA-- 164 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEE---------------------------------EEE--
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcc---------------------------------eEE--
Confidence 788888765 88999999999999999987654442211110 000
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
+...++.||++....++|+.+|+.++.+..
T Consensus 165 -----~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 165 -----VTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp -----ECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----ECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 112355788888888899999998887644
No 80
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.23 E-value=8.8e-05 Score=67.56 Aligned_cols=125 Identities=9% Similarity=-0.004 Sum_probs=83.1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC--CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG--RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|.+++++++++.||+++..++.|+..++. ++....+.... . -..
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----------------------~----------~~~ 85 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-----------------------L----------PGS 85 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-----------------------C----------SSC
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-----------------------c----------CCC
Confidence 588999999999999999988999997765 55544332110 0 114
Q ss_pred cceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 80 PWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
|.+++++++|. ||+++...+.|+.+|+.+|........... .....++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------------------~~~~~~~~ 135 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG------------------------------LDGCHSAN 135 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC------------------------------CTTBCCCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC------------------------------CCCceEEE
Confidence 77899998876 999999899999999854432222110000 00000111
Q ss_pred cccccccccccCCeEEEEeCCCCeEEEEeCCC-CeEEEe
Q 013348 159 YAGLISSSIAFQNHILLCDIVGQRIMRLNRES-GVCSNF 196 (444)
Q Consensus 159 ~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~t-G~vST~ 196 (444)
+...++.||+++...++|+.+++.+ |.+..+
T Consensus 136 -------~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 136 -------ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp -------ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred -------ECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 1234567999998889999999988 776543
No 81
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.23 E-value=1.4e-05 Score=78.91 Aligned_cols=75 Identities=5% Similarity=-0.149 Sum_probs=57.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.+|+++++| .|||+|.. ++|++++ .+|. ++++..... ... +..|.
T Consensus 30 ~P~~ia~~pdG-~l~V~e~~-g~I~~~d-~~G~-~~~~~~~v~-------------------~~g----------~~g~~ 76 (354)
T 3a9g_A 30 VPWSIAPLGGG-RYLVTERP-GRLVLIS-PSGK-KLVASFDVA-------------------NVG----------EAGLL 76 (354)
T ss_dssp CEEEEEEEETT-EEEEEETT-TEEEEEC-SSCE-EEEEECCCC-------------------CST----------TCSEE
T ss_pred CCeEEEEcCCC-eEEEEeCC-CEEEEEe-CCCc-eEeecccee-------------------ecC----------CCcee
Confidence 69999999988 69999997 9999998 5776 666543200 001 56688
Q ss_pred eeEEcCC----CeEEEEeCC---C----CEEEEEECCCC
Q 013348 82 HLMKSED----DNLLIINRS---F----ETLWIMDLASG 109 (444)
Q Consensus 82 gL~~d~d----G~LYIADag---n----h~IrkIDl~tG 109 (444)
+|+++++ +.|||+++. + ++|+++++..+
T Consensus 77 gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 77 GLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp EEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred eEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 9999985 899999975 4 79999998754
No 82
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.22 E-value=2.1e-05 Score=77.55 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=54.4
Q ss_pred CcceEEEecC---CCEEEEEeCC---C----CeEEEEECCCC--e---EEEeccCCCcCccCCcchhhhhcccCcccccC
Q 013348 2 RPAASFYHKD---DDCLYIVDSE---N----HAIRRADMGRR--V---LETVYPTSGISKKNNSLWAWIMEKLGFERDND 66 (444)
Q Consensus 2 ~P~GIa~D~~---g~~LYVADTe---N----HaIRkIDl~tg--~---VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~ 66 (444)
.|.||+++++ ++.|||+++. + ++|.|+++..+ . .+++.- +..
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~-------------------~~~---- 130 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLID-------------------GIP---- 130 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEE-------------------EEE----
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEE-------------------cCC----
Confidence 5899999987 6699999985 4 78999987654 1 111110 000
Q ss_pred ccccCCCCCCCCCcceeEEcCCCeEEEEeC-------------CCCEEEEEECCC
Q 013348 67 TKSEKLDPQSLIFPWHLMKSEDDNLLIINR-------------SFETLWIMDLAS 108 (444)
Q Consensus 67 ~~~~~~~~~~Ln~P~gL~~d~dG~LYIADa-------------gnh~IrkIDl~t 108 (444)
.....+|.+|+++++|.|||++. .+.+|++|+++.
T Consensus 131 -------~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 131 -------GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp -------CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred -------CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 01156688999999999999963 236999999863
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.20 E-value=2e-05 Score=75.23 Aligned_cols=85 Identities=11% Similarity=0.029 Sum_probs=60.5
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC--CC-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG--RR-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
.|.|++++++++.||++|+.++.|.++|+. +| .+. . . ..| . . . ... ..
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~----~--~-----~~~--~-~-~----~~~----------~~ 230 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG----K--A-----EVF--I-D-S----TGI----------KG 230 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS----C--C-----EEE--E-E-C----TTS----------SS
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc----C--c-----eEE--E-E-C----CCC----------CC
Confidence 478999999998999999999999999975 44 210 0 0 000 0 0 0 000 34
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
.|.+++++.+|+|||++.++++|+++|+....+.++.
T Consensus 231 ~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~ 267 (326)
T 2ghs_A 231 GMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYE 267 (326)
T ss_dssp EEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEE
T ss_pred CCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEE
Confidence 5889999999999999999999999999533444444
No 84
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.17 E-value=5.1e-05 Score=68.92 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=61.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.+++++++++.||+++..++.|+.+|+.++.+......+.. +. . -..|.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---------------~~----~----------~~~~~ 85 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP---------------EE----R----------VKSLF 85 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT---------------TE----E----------EECTT
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc---------------cc----c----------ccccc
Confidence 5899999999999999999999999999988765432222111 00 0 12467
Q ss_pred eeEEcCCC-eEEEEeC-----------CCCEEEEEECCCCcEEE
Q 013348 82 HLMKSEDD-NLLIINR-----------SFETLWIMDLASGEIKE 113 (444)
Q Consensus 82 gL~~d~dG-~LYIADa-----------gnh~IrkIDl~tG~I~T 113 (444)
+++++++| .||+++. ..++|+.+|+.++++..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 88998886 7999973 36899999999887543
No 85
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.16 E-value=1.2e-05 Score=80.99 Aligned_cols=121 Identities=9% Similarity=0.128 Sum_probs=80.4
Q ss_pred CcceEEEecC--CC-EEEEEeCC--CCeEEE--EECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCC
Q 013348 2 RPAASFYHKD--DD-CLYIVDSE--NHAIRR--ADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDP 74 (444)
Q Consensus 2 ~P~GIa~D~~--g~-~LYVADTe--NHaIRk--IDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~ 74 (444)
+|+||.+..+ +. .|||+|.. ++.|.. ++..++ ..+++.+ . ..
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~-~~~~~~~--~----------------------------~g 161 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK-SLLHLKT--I----------------------------RH 161 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT-EEEEEEE--E----------------------------CC
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC-EEEEEec--c----------------------------cc
Confidence 7999999663 33 79999987 566555 443333 3333322 0 01
Q ss_pred CCCCCcceeEEcCCCeEEEEeC-----------------CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhh
Q 013348 75 QSLIFPWHLMKSEDDNLLIINR-----------------SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLK 137 (444)
Q Consensus 75 ~~Ln~P~gL~~d~dG~LYIADa-----------------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~ 137 (444)
.+|++|-+++++++|.+|+.+. ...+|+++|+ ++++.++.+...
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~----------------- 222 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDF----------------- 222 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESS-----------------
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcc-----------------
Confidence 1299999999999999999976 2468999987 466655543211
Q ss_pred cCCcccccccccccccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCC-CCeEEE
Q 013348 138 QMPQDWLLHQIDSSCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRE-SGVCSN 195 (444)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~-tG~vST 195 (444)
+.|+++ ..++..||+||+..++|+++++. +|.++.
T Consensus 223 ----------------pNGia~-------spDg~~lYvadt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 223 ----------------ANGINI-------SPDGKYVYIAELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp ----------------EEEEEE-------CTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred ----------------cCcceE-------CCCCCEEEEEeCCCCeEEEEEECCCCcEec
Confidence 112222 23566899999999999999986 455544
No 86
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.15 E-value=3.4e-05 Score=73.52 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=52.1
Q ss_pred CCCcceeEEcCCCeEEEEeCC------CCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccc
Q 013348 77 LIFPWHLMKSEDDNLLIINRS------FETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDS 150 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADag------nh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~ 150 (444)
.+.|.+++++++|.|||++.+ ...|+++| +|.++.+..+...
T Consensus 133 ~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~------------------------------ 180 (326)
T 2ghs_A 133 GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISI------------------------------ 180 (326)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESS------------------------------
T ss_pred CCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcc------------------------------
Confidence 456889999999999999864 47899999 5877665421100
Q ss_pred cccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCC--CC
Q 013348 151 SCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRE--SG 191 (444)
Q Consensus 151 ~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~--tG 191 (444)
+.++. +...++.||++|+.+++|.+++++ +|
T Consensus 181 ---~~~i~-------~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 181 ---PNSIC-------FSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp ---EEEEE-------ECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred ---cCCeE-------EcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 00111 122456799999999999999986 77
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.14 E-value=0.00012 Score=66.57 Aligned_cols=145 Identities=12% Similarity=0.152 Sum_probs=90.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC--CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG--RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.|.+++++++++.||+++..++.|+.+++. ++.+..+.-.... ..+. .. ...
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~-------------~~~~---~~----------~~~ 232 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM-------------PENF---SD----------TRW 232 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS-------------CTTC---CS----------CCC
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecccc-------------Cccc---cc----------cCC
Confidence 578899999999999999999999999984 3443322111000 0000 01 456
Q ss_pred cceeEEcCCC-eEEEEeCCCCEEEEEECC--CCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccC
Q 013348 80 PWHLMKSEDD-NLLIINRSFETLWIMDLA--SGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKE 156 (444)
Q Consensus 80 P~gL~~d~dG-~LYIADagnh~IrkIDl~--tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~G 156 (444)
|.+++++++| .||+++...++|+.+|+. +|..+.+.. .+. .+ .+.+
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~-~~~----~~--------------------------~~~~ 281 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF-QPT----ET--------------------------QPRG 281 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE-EEC----SS--------------------------SCCC
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee-ecC----CC--------------------------ccce
Confidence 7889999886 699999999999999987 555544431 000 00 0001
Q ss_pred CCcccccccccccCCeEEEEeCCCCeEEEE--eCCCCeEEEeeeccccccCCceeeee
Q 013348 157 LPYAGLISSSIAFQNHILLCDIVGQRIMRL--NRESGVCSNFQFSNFAILGLPYWFAF 212 (444)
Q Consensus 157 ip~a~~~Sgla~~~~~LyIADT~nhRIRkv--dl~tG~vST~~fsg~g~lg~P~~l~~ 212 (444)
+. +...++.||+++...+.|+.+ |.++|....+..-..| ..|.++.+
T Consensus 282 ~~-------~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g--~~p~~i~~ 330 (343)
T 1ri6_A 282 FN-------VDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG--QGPMWVVV 330 (343)
T ss_dssp EE-------ECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS--SSCCEEEE
T ss_pred EE-------ECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC--CCCeeEEE
Confidence 11 123456799999888888776 7778877766422222 34555554
No 88
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.13 E-value=7.6e-05 Score=70.49 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=57.5
Q ss_pred CCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccC
Q 013348 77 LIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKE 156 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~G 156 (444)
+..|+++.+..+|++|+++..+++|..+|++ |++..-.+...
T Consensus 124 ~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~------------------------------------- 165 (276)
T 3no2_A 124 HAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG------------------------------------- 165 (276)
T ss_dssp GGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-------------------------------------
T ss_pred cccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-------------------------------------
Confidence 5568888999999999999999999999998 76543332111
Q ss_pred CCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeE-EEee
Q 013348 157 LPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVC-SNFQ 197 (444)
Q Consensus 157 ip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~v-ST~~ 197 (444)
.|++ .....+++++|++..++||..+|++||.+ -++.
T Consensus 166 ~~~~----~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 166 TPFS----SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CCCE----EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred Cccc----eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 1111 11224678999999999999999996665 4443
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.09 E-value=7e-05 Score=70.76 Aligned_cols=135 Identities=13% Similarity=0.174 Sum_probs=86.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++.+++|+ ++|+++.+++|..+|+. |.+. |.|.. -..|+
T Consensus 126 ~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~-G~~~---------------w~~~~--------------------~~~~~ 168 (276)
T 3no2_A 126 QFRQINKNKKGN-YLVPLFATSEVREIAPN-GQLL---------------NSVKL--------------------SGTPF 168 (276)
T ss_dssp SCSCCEECTTSC-EEEEETTTTEEEEECTT-SCEE---------------EEEEC--------------------SSCCC
T ss_pred cccCceECCCCC-EEEEecCCCEEEEECCC-CCEE---------------EEEEC--------------------CCCcc
Confidence 356778887774 88899999999999976 5432 22210 01356
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
++....+|++||++..+++|..+|++||++..-.+. .... +. .+++
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~-~~~~---~~----------------------------~l~~-- 214 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA-NDIE---GV----------------------------QLFF-- 214 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG-GGSB---SC----------------------------CCSE--
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC-CCCC---Cc----------------------------cccc--
Confidence 677778899999999999999999998976433321 1000 00 0000
Q ss_pred cccccc-ccCCeEEEEeCCCC----------eEEEEeCCCCeEEEeeeccccccCCceee
Q 013348 162 LISSSI-AFQNHILLCDIVGQ----------RIMRLNRESGVCSNFQFSNFAILGLPYWF 210 (444)
Q Consensus 162 ~~Sgla-~~~~~LyIADT~nh----------RIRkvdl~tG~vST~~fsg~g~lg~P~~l 210 (444)
|++++ ..++++||++..+| ++.+++.+...+=+ |.....+|.+...
T Consensus 215 -~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~--~~~~~~~~~~~~~ 271 (276)
T 3no2_A 215 -VAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ--LNDKVKFGMISTI 271 (276)
T ss_dssp -EEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE--ECCTTTSCCCCEE
T ss_pred -cccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE--ecCcccccceeee
Confidence 22222 34789999997544 68889876555444 5555666666555
No 90
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.08 E-value=4.7e-05 Score=74.86 Aligned_cols=78 Identities=14% Similarity=0.079 Sum_probs=53.2
Q ss_pred CcceEEEecC---CCEEEEEeCC-------CCeEEEEECCCC--eE---EEec-cCCCcCccCCcchhhhhcccCccccc
Q 013348 2 RPAASFYHKD---DDCLYIVDSE-------NHAIRRADMGRR--VL---ETVY-PTSGISKKNNSLWAWIMEKLGFERDN 65 (444)
Q Consensus 2 ~P~GIa~D~~---g~~LYVADTe-------NHaIRkIDl~tg--~V---tTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a 65 (444)
.|.||+++++ ++.|||+++. +++|.++++..+ .+ +++. +- +....
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~-------------------p~~~~ 127 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQM-------------------PKLST 127 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECS-------------------SCCBS
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEEC-------------------CCCCC
Confidence 4789999986 6699999986 578888876532 22 1111 10 00001
Q ss_pred CccccCCCCCCCCCcceeEEcCCCeEEEEeCC-------------CCEEEEEECCC
Q 013348 66 DTKSEKLDPQSLIFPWHLMKSEDDNLLIINRS-------------FETLWIMDLAS 108 (444)
Q Consensus 66 ~~~~~~~~~~~Ln~P~gL~~d~dG~LYIADag-------------nh~IrkIDl~t 108 (444)
. ..+|.+|++++||.|||+.-. ..+|++||++.
T Consensus 128 ~----------~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 128 G----------NHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp S----------SCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred C----------cccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 1 556889999999999999622 36999999874
No 91
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.98 E-value=0.00017 Score=66.01 Aligned_cols=77 Identities=12% Similarity=0.141 Sum_probs=57.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
+.|+++.+. +.+||+.+.++.|+.+|+.++.+......+. ...|.+
T Consensus 2 ~~g~~~~~~-~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------------------------------~~~~~~ 47 (349)
T 1jmx_B 2 DTGPALKAG-HEYMIVTNYPNNLHVVDVASDTVYKSCVMPD---------------------------------KFGPGT 47 (349)
T ss_dssp --CCCCCTT-CEEEEEEETTTEEEEEETTTTEEEEEEECSS---------------------------------CCSSCE
T ss_pred CccccccCC-CEEEEEeCCCCeEEEEECCCCcEEEEEecCC---------------------------------CCCCce
Confidence 568888655 4899999999999999998886532211110 123678
Q ss_pred eEEcCCCe-EEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKSEDDN-LLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d~dG~-LYIADagnh~IrkIDl~tG~I~T 113 (444)
++++++|. +|++...+++|+++|+.+|++..
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 88888874 99999999999999999997653
No 92
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.94 E-value=0.00066 Score=61.58 Aligned_cols=76 Identities=17% Similarity=0.113 Sum_probs=56.5
Q ss_pred CcceEEEecCCCEEEEEeC-----------CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCcccc
Q 013348 2 RPAASFYHKDDDCLYIVDS-----------ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSE 70 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADT-----------eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~ 70 (444)
.|.+++++++|+.||+++. .++.|+.+|+.++.+......+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---------------------------- 134 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---------------------------- 134 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----------------------------
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----------------------------
Confidence 6889999999999999973 3689999999877553221111
Q ss_pred CCCCCCCCCcceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEee
Q 013348 71 KLDPQSLIFPWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 71 ~~~~~~Ln~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
..|.+++++++|. ||++ ++.|+.+|+.+|++....
T Consensus 135 -------~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 135 -------RQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp -------SSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEE
T ss_pred -------CCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeee
Confidence 1256778888765 9998 478999999999875433
No 93
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.87 E-value=0.00023 Score=68.07 Aligned_cols=138 Identities=7% Similarity=-0.019 Sum_probs=84.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC--CCeEE----EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG--RRVLE----TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg~Vt----TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
.|.+++++++|+.||+++..++.|+.+++. +|.+. ++.-.. . ++. +..+..+ .
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~-~--------~~~-g~~~~~~--~--------- 252 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP-P--------GIP-DRDPETG--K--------- 252 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC-T--------TCC-CBCTTTS--S---------
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC-C--------CcC-Ccccccc--c---------
Confidence 488999999999999999988999887653 56542 222110 0 000 0000000 1
Q ss_pred CCCCcceeE-EcCCC-eEEEEeCCCC-----EEEEEECC-CCcEEEeecCCccceeecceehhhhhhhhhcCCccccccc
Q 013348 76 SLIFPWHLM-KSEDD-NLLIINRSFE-----TLWIMDLA-SGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQ 147 (444)
Q Consensus 76 ~Ln~P~gL~-~d~dG-~LYIADagnh-----~IrkIDl~-tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~ 147 (444)
...|.+++ +++|| .||+++++.+ +|+.++++ +|+++.+..-.+.
T Consensus 253 -~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~--------------------------- 304 (365)
T 1jof_A 253 -GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT--------------------------- 304 (365)
T ss_dssp -BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC---------------------------
T ss_pred -ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec---------------------------
Confidence 44689999 99987 5899998877 88888875 7887653210000
Q ss_pred ccccccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEE
Q 013348 148 IDSSCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCS 194 (444)
Q Consensus 148 ~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vS 194 (444)
....+.+++++ |..+ +++.||+++..+++|+.++++++..+
T Consensus 305 --~~~~~~~~a~s--p~~~--dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 305 --PTSGGHSNAVS--PCPW--SDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp --SSCCTTCCCEE--ECTT--CTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred --CCCCcccceec--CCCc--CCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 00011122210 1011 46789999998899998888776443
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.86 E-value=0.00052 Score=65.48 Aligned_cols=113 Identities=15% Similarity=0.213 Sum_probs=80.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++++.||++.+.++.|+.+|+.++.+...... -..|.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-----------------------------------~~~~~ 348 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-----------------------------------FDKPN 348 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-----------------------------------SSSEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-----------------------------------CCCCC
Confidence 4778999999989999999999999999987765432221 12356
Q ss_pred eeEEcCCC-eEEEEeCCCC--------------EEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccc
Q 013348 82 HLMKSEDD-NLLIINRSFE--------------TLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLH 146 (444)
Q Consensus 82 gL~~d~dG-~LYIADagnh--------------~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~ 146 (444)
+++++++| .||+++..++ +|+.+|+.++++.....+...+.
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~------------------------ 404 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPT------------------------ 404 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEE------------------------
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCc------------------------
Confidence 88888876 4999988754 99999999987655443211110
Q ss_pred cccccccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCC
Q 013348 147 QIDSSCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRE 189 (444)
Q Consensus 147 ~~~~~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~ 189 (444)
++. +...+..||+++...+.|+.++++
T Consensus 405 ---------~~~-------~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 405 ---------GLD-------VSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ---------EEE-------ECTTSCEEEEEETTTTEEEEEEET
T ss_pred ---------eEE-------EcCCCCEEEEEECCCCeEEEEEec
Confidence 011 123456789999888999998875
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.82 E-value=0.00066 Score=64.77 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=83.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++++.||++...++.|+.+|+.++.+...... -..|.
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------------------------~~~~~ 257 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----------------------------------IGLPR 257 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----------------------------------CSEEE
T ss_pred CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----------------------------------CCCce
Confidence 4788999999999999999999999999987755322111 11267
Q ss_pred eeEEcCCC-eEEEEeC-------CCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 82 HLMKSEDD-NLLIINR-------SFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 82 gL~~d~dG-~LYIADa-------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
+++++++| .||++.. .+++|+.+|+.+|++.........+.
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~------------------------------- 306 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKR------------------------------- 306 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEE-------------------------------
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcc-------------------------------
Confidence 88888776 6888875 46799999999887654432100000
Q ss_pred ccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 154 LKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 154 ~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
++. +...++.||++....++|+.+|++++.+..
T Consensus 307 --~~~-------~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 307 --HIV-------SGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp --EEE-------ECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --eEE-------ECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 001 112355799999999999999999887643
No 96
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.79 E-value=0.00017 Score=74.03 Aligned_cols=80 Identities=11% Similarity=0.127 Sum_probs=59.7
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.+|+++++| .|||++...++|++++..+|..++++...... . . + .. ...+.
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~---------~-~---~---~g----------~~Gll 80 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIV---------N-D---A---DG----------QNGLL 80 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCC---------C-C---T---TS----------SCSEE
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccc---------c-c---c---CC----------CCcee
Confidence 79999999998 59999998889999998778888776542110 0 0 0 00 34567
Q ss_pred eeEEcC----CCeEEEEeCC------------CCEEEEEECCC
Q 013348 82 HLMKSE----DDNLLIINRS------------FETLWIMDLAS 108 (444)
Q Consensus 82 gL~~d~----dG~LYIADag------------nh~IrkIDl~t 108 (444)
+|++++ ++.|||+++. .++|.+++++.
T Consensus 81 gia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~ 123 (454)
T 1cru_A 81 GFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNK 123 (454)
T ss_dssp EEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEET
T ss_pred EEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECC
Confidence 999997 6899999974 56899998753
No 97
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.78 E-value=0.00023 Score=69.98 Aligned_cols=79 Identities=10% Similarity=0.081 Sum_probs=55.4
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEE-eccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLET-VYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtT-VAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.+|.+|+++++|..|||++. +.+|++++. +|.+.+ +++.... + ... ...
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~-~g~~~~~~~~~~~v-------~-----------~~g----------~~g 67 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLR-GGELRHWQA-GKGLSAPLSGVPDV-------W-----------AHG----------QGG 67 (353)
T ss_dssp SSEEEEEECSTTCCEEEEET-TTEEEEEET-TTEECCCCBSCCCC-------C-----------CST----------TCS
T ss_pred CCcEEEEEcCCCCEEEEEeC-CceEEEEeC-CCceeeEecCCccc-------c-----------cCC----------CCC
Confidence 37999999999844999998 489999985 555533 4433211 0 001 445
Q ss_pred cceeEEcC----CCeEEEEeCC-------CCEEEEEECCCC
Q 013348 80 PWHLMKSE----DDNLLIINRS-------FETLWIMDLASG 109 (444)
Q Consensus 80 P~gL~~d~----dG~LYIADag-------nh~IrkIDl~tG 109 (444)
|.+|++++ ++.|||+++. .++|.+++++.+
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCC
Confidence 78999987 4899999876 578999987543
No 98
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.72 E-value=0.0016 Score=67.39 Aligned_cols=169 Identities=12% Similarity=0.026 Sum_probs=103.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEC--CCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADM--GRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl--~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
.|++++++++|+.||+++.. +.|+.+|+ .++.+ .++. . =.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~-~-----------------------------------g~ 222 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK-I-----------------------------------GI 222 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-C-----------------------------------CS
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-c-----------------------------------CC
Confidence 37899999999999999987 99999999 66643 2232 1 12
Q ss_pred CcceeEEcC----CC-eEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 79 FPWHLMKSE----DD-NLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 79 ~P~gL~~d~----dG-~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
.|++|++++ +| .||+++...++|..||..++++.......+... .++ .|.
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~--~~~--------------~~~--------- 277 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV--DTQ--------------TYH--------- 277 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS--SSC--------------CEE---------
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCccc--Ccc--------------ccc---------
Confidence 378999987 75 699999999999999999987654432111000 000 000
Q ss_pred ccCCCccccccccc--ccCCeEEEEeCCCCeEEEEeCCCCeE---EEeeeccccccCCceeeee-ccceeeecccccCCc
Q 013348 154 LKELPYAGLISSSI--AFQNHILLCDIVGQRIMRLNRESGVC---SNFQFSNFAILGLPYWFAF-PLERVYAVAGGHQGS 227 (444)
Q Consensus 154 ~~Gip~a~~~Sgla--~~~~~LyIADT~nhRIRkvdl~tG~v---ST~~fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~ 227 (444)
+. | .+.++. ..++.+|++..+..+|..+|.+++.. .++. .+ ..|..+.+ |-++.+ +.+..
T Consensus 278 ~~--~---~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~---~~--~~~~~~~~spdg~~l----~va~~ 343 (543)
T 1nir_A 278 PE--P---RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG---AA--PFLHDGGWDSSHRYF----MTAAN 343 (543)
T ss_dssp SC--C---CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE---CC--SSCCCEEECTTSCEE----EEEEG
T ss_pred cC--C---ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec---cC--cCccCceECCCCCEE----EEEec
Confidence 00 0 011221 23668999999999999999987643 2332 12 22333332 433211 11223
Q ss_pred ccceeeeeecCCCeeeEEE
Q 013348 228 WTDHIQRCSLLPGRIDIKV 246 (444)
Q Consensus 228 ~~~~i~~v~~~pGri~i~v 246 (444)
....|.-+|+..|++.=.+
T Consensus 344 ~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 344 NSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp GGTEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCCeEEEee
Confidence 3456777888888765433
No 99
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.66 E-value=0.00029 Score=72.35 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=62.5
Q ss_pred CcceEEEecCCCEEEEEeC---------CCCeEEEEECCCCeE-EEec-c-CCCcCccCCcchhhhhcccCcccccCccc
Q 013348 2 RPAASFYHKDDDCLYIVDS---------ENHAIRRADMGRRVL-ETVY-P-TSGISKKNNSLWAWIMEKLGFERDNDTKS 69 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADT---------eNHaIRkIDl~tg~V-tTVA-G-tG~~~~~~~~l~g~~~~~~G~a~~a~~~~ 69 (444)
.| |++++++|+.|||+++ ..+.|..||..++.+ .+|. | .+.. ..
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~--------------------~~--- 175 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF--------------------LV--- 175 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC--------------------CB---
T ss_pred CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc--------------------cc---
Confidence 69 9999999999999997 467899999998765 3442 2 1100 01
Q ss_pred cCCCCCCCCCcceeEEcCCC-eEEEEeCC-CCEEEEEECCCCcEE
Q 013348 70 EKLDPQSLIFPWHLMKSEDD-NLLIINRS-FETLWIMDLASGEIK 112 (444)
Q Consensus 70 ~~~~~~~Ln~P~gL~~d~dG-~LYIADag-nh~IrkIDl~tG~I~ 112 (444)
...|.++++++|| .|||++.. .+.|.+||+.++++.
T Consensus 176 -------g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 176 -------GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp -------SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred -------CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 3569999999886 69999975 899999999998764
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.65 E-value=0.00029 Score=64.45 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=61.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|.+++++++++.||++...++.|+.+|+.++.+......+.. +. .. -..|.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~----------------~~--~~----------~~~~~ 95 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV----------------PG--EV----------GRSMY 95 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS----------------TT--EE----------EECSS
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc----------------cc--cc----------ccccc
Confidence 5889999999989999999999999999998876533222111 00 01 23578
Q ss_pred eeEEcCCC-eEEEEeCC-----------CCEEEEEECCCCcE
Q 013348 82 HLMKSEDD-NLLIINRS-----------FETLWIMDLASGEI 111 (444)
Q Consensus 82 gL~~d~dG-~LYIADag-----------nh~IrkIDl~tG~I 111 (444)
+++++++| .||++... .++|+.+|+.+|++
T Consensus 96 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 96 SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 89998886 68888855 67999999987653
No 101
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.0017 Score=62.37 Aligned_cols=179 Identities=12% Similarity=0.078 Sum_probs=105.9
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.++||+|+++++.||++.-++..|-++|+....+.++. -+ | +.-|-
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~-l~-----------------g----------------~~D~E 73 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP-LD-----------------F----------------VKDLE 73 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE-CS-----------------S----------------CSSEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe-cC-----------------C----------------CCChH
Confidence 58999999988899987777999999998744444441 10 0 23367
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCC-CcEEEee--c-CC---c-----cceeec--c-eehhhhhhhhhc-CCc-ccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLAS-GEIKEAV--K-GF---S-----KVLEIC--G-VLVMEKVFLLKQ-MPQ-DWL 144 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~t-G~I~Tia--g-G~---~-----~~~~~~--G-~li~~~~a~l~~-~~~-~~~ 144 (444)
||++.++|.+||++.++|++..++..+ +.+..+. . +. + +.+..+ + .++. .++ .|. -|.
T Consensus 74 GIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v-----a~E~~p~~i~~ 148 (255)
T 3qqz_A 74 TIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF-----FKEKNPIEVYK 148 (255)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE-----EEESSSEEEEE
T ss_pred HeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE-----EECcCCceEEE
Confidence 899999899999999999999998654 3332111 1 11 1 111111 1 1111 111 121 111
Q ss_pred ccccccc---ccc-----cCCCcccccccccc--cCCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeecc
Q 013348 145 LHQIDSS---CSL-----KELPYAGLISSSIA--FQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPL 214 (444)
Q Consensus 145 ~~~~~~~---~~~-----~Gip~a~~~Sgla~--~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL 214 (444)
-+....+ ..+ .+-.+..-+|+++. ..++|||...+++++..+|+++..++.+.+. -|..|+.-.+..|=
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~-~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLT-KGSRGLSHNIKQAE 227 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECS-TTGGGCSSCCCSEE
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcC-CccCCcccccCCCC
Confidence 0000000 000 00001112566664 3568999999999999999998877777655 35666667777776
Q ss_pred ceeeec
Q 013348 215 ERVYAV 220 (444)
Q Consensus 215 ~~v~~~ 220 (444)
+++++.
T Consensus 228 Gia~d~ 233 (255)
T 3qqz_A 228 GVAMDA 233 (255)
T ss_dssp EEEECT
T ss_pred eeEECC
Confidence 666643
No 102
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.59 E-value=0.00054 Score=68.75 Aligned_cols=78 Identities=13% Similarity=-0.037 Sum_probs=59.5
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|.+|++.++| .|||++...++|++++..++..+.+++.... + . .. ...|.
T Consensus 33 ~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v-------~--~---------~g----------~~Gll 83 (347)
T 3das_A 33 SPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGV-------S--P---------SG----------EGGLL 83 (347)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTC-------C--C---------BT----------TBSEE
T ss_pred CceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCce-------e--e---------cC----------CCCce
Confidence 79999999998 5999999889999999877887777654211 0 0 01 56678
Q ss_pred eeEEcC----CCeEEEEeC--CCCEEEEEECCC
Q 013348 82 HLMKSE----DDNLLIINR--SFETLWIMDLAS 108 (444)
Q Consensus 82 gL~~d~----dG~LYIADa--gnh~IrkIDl~t 108 (444)
+|++++ ++.||++.+ ..++|.++.+..
T Consensus 84 Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 84 GIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred eeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 999986 489999764 567899998765
No 103
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.55 E-value=0.00077 Score=69.21 Aligned_cols=121 Identities=11% Similarity=0.059 Sum_probs=82.0
Q ss_pred cCCCEEEEEeCCC----CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEE
Q 013348 10 KDDDCLYIVDSEN----HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMK 85 (444)
Q Consensus 10 ~~g~~LYVADTeN----HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~ 85 (444)
++++.+||++... +.|-.||+.+++|.--...| ..| ++++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-----------------------------------~~P-gia~ 125 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-----------------------------------FLP-HPVA 125 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-----------------------------------SSC-EEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-----------------------------------CCC-ceEE
Confidence 3567899999864 79999999998765322222 138 8999
Q ss_pred cCCC-eEEEEeC---------CCCEEEEEECCCCcEE-Eee-cCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 86 SEDD-NLLIINR---------SFETLWIMDLASGEIK-EAV-KGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 86 d~dG-~LYIADa---------gnh~IrkIDl~tG~I~-Tia-gG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
++|| .|||++. ..+.|.+||+.++++. +|. +|.++.. .+..
T Consensus 126 SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~---------------------------~g~~ 178 (426)
T 3c75_H 126 AEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL---------------------------VGTY 178 (426)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC---------------------------BSCC
T ss_pred CCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc---------------------------cCCC
Confidence 9885 5999996 4678999999998753 443 2111110 0011
Q ss_pred ccCCCcccccccccccCCeEEEEeCC-CCeEEEEeCCCCeE-EEeeecc
Q 013348 154 LKELPYAGLISSSIAFQNHILLCDIV-GQRIMRLNRESGVC-SNFQFSN 200 (444)
Q Consensus 154 ~~Gip~a~~~Sgla~~~~~LyIADT~-nhRIRkvdl~tG~v-ST~~fsg 200 (444)
+.++. +..+++.|||+... .+.|..||+.++.+ .+|...+
T Consensus 179 P~~~~-------~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 179 QWMNA-------LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp GGGSE-------ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred cceEE-------EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC
Confidence 11222 23467799999865 78999999999877 4665443
No 104
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.53 E-value=0.002 Score=63.63 Aligned_cols=81 Identities=9% Similarity=0.091 Sum_probs=58.7
Q ss_pred CcceEEEecCCCEEEEEeCC---------CCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccC
Q 013348 2 RPAASFYHKDDDCLYIVDSE---------NHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEK 71 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe---------NHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~ 71 (444)
.| |++++++|+.|||+++. .+.|..+|..++.+ .++. .+.. .....
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~-~~~~-----------------~~~~~----- 123 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE-LPDA-----------------PRFDV----- 123 (373)
T ss_pred CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE-CCCc-----------------ccccc-----
Confidence 57 99999999999999863 56799999876544 3332 2100 00000
Q ss_pred CCCCCCCCcceeEEcCCC-eEEEEeCC-CCEEEEEECCCCcEE
Q 013348 72 LDPQSLIFPWHLMKSEDD-NLLIINRS-FETLWIMDLASGEIK 112 (444)
Q Consensus 72 ~~~~~Ln~P~gL~~d~dG-~LYIADag-nh~IrkIDl~tG~I~ 112 (444)
-..|.++++++|| .||+++.. .++|..|| +++++.
T Consensus 124 -----g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 124 -----GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred -----CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE
Confidence 2468999999885 59999976 79999999 999764
No 105
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.51 E-value=0.00078 Score=68.59 Aligned_cols=123 Identities=8% Similarity=-0.000 Sum_probs=83.5
Q ss_pred EecCCCEEEEEeCC----CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 8 YHKDDDCLYIVDSE----NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 8 ~D~~g~~LYVADTe----NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
-.|+++.|||+|.+ .+.|..||..++.+..-..+| ..| ++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-----------------------------------~~P-~v 83 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-----------------------------------FLP-NP 83 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-----------------------------------SSC-EE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-----------------------------------CCC-cE
Confidence 35788999999997 789999999998765333332 115 48
Q ss_pred EEcCCC-eEEEEeC---------CCCEEEEEECCCCcE-EEeecCC-ccceeecceehhhhhhhhhcCCccccccccccc
Q 013348 84 MKSEDD-NLLIINR---------SFETLWIMDLASGEI-KEAVKGF-SKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSS 151 (444)
Q Consensus 84 ~~d~dG-~LYIADa---------gnh~IrkIDl~tG~I-~TiagG~-~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~ 151 (444)
++++|| .||++++ ..+.|.+||+.|+++ .++.-|. .+.. .+
T Consensus 84 a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~---------------------------~g 136 (386)
T 3sjl_D 84 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL---------------------------VG 136 (386)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC---------------------------BS
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc---------------------------cC
Confidence 888886 5999995 357799999999975 4443211 1110 00
Q ss_pred ccccCCCcccccccccccCCeEEEEeCC-CCeEEEEeCCCCeE-EEeeecc
Q 013348 152 CSLKELPYAGLISSSIAFQNHILLCDIV-GQRIMRLNRESGVC-SNFQFSN 200 (444)
Q Consensus 152 ~~~~Gip~a~~~Sgla~~~~~LyIADT~-nhRIRkvdl~tG~v-ST~~fsg 200 (444)
..+.++. +..++..||++... .+.|..||+.++.+ .+|...+
T Consensus 137 ~~P~~~a-------~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 137 TYPWMTS-------LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp CCGGGEE-------ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred CCCceEE-------EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC
Confidence 1111111 23467789999864 78999999999986 5665554
No 106
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.46 E-value=0.0009 Score=68.11 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=63.2
Q ss_pred CcceEEEecCCCEEEEEeCC---------CCeEEEEECCCCeE-EEec-cCCCcCccCCcchhhhhcccCcccccCcccc
Q 013348 2 RPAASFYHKDDDCLYIVDSE---------NHAIRRADMGRRVL-ETVY-PTSGISKKNNSLWAWIMEKLGFERDNDTKSE 70 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTe---------NHaIRkIDl~tg~V-tTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~ 70 (444)
.|. ++++++|..|||+++. .+.|..||..++.+ .+|. |.|.. .
T Consensus 80 ~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r--------------------~----- 133 (386)
T 3sjl_D 80 LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR--------------------F----- 133 (386)
T ss_dssp SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC--------------------C-----
T ss_pred CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc--------------------c-----
Confidence 585 9999999999999963 56799999998864 4442 32211 0
Q ss_pred CCCCCCCCCcceeEEcCCC-eEEEEeCC-CCEEEEEECCCCcE-EEee
Q 013348 71 KLDPQSLIFPWHLMKSEDD-NLLIINRS-FETLWIMDLASGEI-KEAV 115 (444)
Q Consensus 71 ~~~~~~Ln~P~gL~~d~dG-~LYIADag-nh~IrkIDl~tG~I-~Tia 115 (444)
+.-.+|+++++++|| .|||++.. .+.|..||+.++++ .+|.
T Consensus 134 ----~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 134 ----LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp ----CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ----ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 004579999999986 59999975 79999999999975 4453
No 107
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.46 E-value=0.0071 Score=62.60 Aligned_cols=129 Identities=6% Similarity=-0.075 Sum_probs=87.7
Q ss_pred CcceEEEec----CCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCC
Q 013348 2 RPAASFYHK----DDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQS 76 (444)
Q Consensus 2 ~P~GIa~D~----~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~ 76 (444)
.|.++++++ +|+.||++....+.|+.+|..++.+ .++...|.. . .+. .|++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~------------~-~~~---------~~~~-- 278 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT------------V-DTQ---------TYHP-- 278 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC------------S-SSC---------CEES--
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc------------c-Ccc---------cccc--
Confidence 589999999 9999999999899999999988754 444432211 0 000 0111
Q ss_pred CCCcceeEEcCC-CeEEEEeCCCCEEEEEECCCCcE---EEeecCCccceeecceehhhhhhhhhcCCcccccccccccc
Q 013348 77 LIFPWHLMKSED-DNLLIINRSFETLWIMDLASGEI---KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSC 152 (444)
Q Consensus 77 Ln~P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~I---~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~ 152 (444)
-..|.+++++.+ +.+|++....++||.+|..++.. +++..| .
T Consensus 279 ~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~--~-------------------------------- 324 (543)
T 1nir_A 279 EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA--P-------------------------------- 324 (543)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC--S--------------------------------
T ss_pred CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC--c--------------------------------
Confidence 124678888875 67999999999999999987642 222210 0
Q ss_pred cccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 153 SLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 153 ~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
.+.++. +...+..+|++....+.|..+|+++|.+..
T Consensus 325 ~~~~~~-------~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 325 FLHDGG-------WDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp SCCCEE-------ECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CccCce-------ECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 000111 123466799999989999999999998754
No 108
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.45 E-value=0.00035 Score=70.12 Aligned_cols=83 Identities=4% Similarity=-0.118 Sum_probs=62.5
Q ss_pred CcceEEEecCCCEEEEEeC---------CCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccC
Q 013348 2 RPAASFYHKDDDCLYIVDS---------ENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEK 71 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADT---------eNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~ 71 (444)
.| |+++++++..|||+++ ..+.|..||+.++. +.+|.-.|.. +| ..
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~--------~~----------~~----- 122 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP--------RF----------SV----- 122 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC--------SC----------CB-----
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc--------cc----------cc-----
Confidence 68 9999999999999995 47899999999875 4455311101 00 01
Q ss_pred CCCCCCCCcceeEEcCCC-eEEEEeCC-CCEEEE--EECCCCcEEEee
Q 013348 72 LDPQSLIFPWHLMKSEDD-NLLIINRS-FETLWI--MDLASGEIKEAV 115 (444)
Q Consensus 72 ~~~~~Ln~P~gL~~d~dG-~LYIADag-nh~Irk--IDl~tG~I~Tia 115 (444)
...|.++++++|| .|||++.+ .+.+.. ||+.+ +.++.
T Consensus 123 -----g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~ 163 (368)
T 1mda_H 123 -----GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTK 163 (368)
T ss_dssp -----SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEE
T ss_pred -----CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEE
Confidence 5679999999986 69999986 688999 99987 66554
No 109
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.37 E-value=0.0014 Score=63.15 Aligned_cols=81 Identities=12% Similarity=0.246 Sum_probs=62.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|+||++|+..+.|||...++++|-.+|+....+..+.=.+.. .|+ ... +..|-
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~--------------~~l--~~~----------~~qpE 227 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGS--------------RGL--SHN----------IKQAE 227 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTG--------------GGC--SSC----------CCSEE
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCcc--------------CCc--ccc----------cCCCC
Confidence 5899999999999999999999999999877666665422111 122 112 78899
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
||++|++|+|||+.-.| .+|++....|
T Consensus 228 Gia~d~~G~lyIvsE~n-~~y~f~~~~~ 254 (255)
T 3qqz_A 228 GVAMDASGNIYIVSEPN-RFYRFTPQSS 254 (255)
T ss_dssp EEEECTTCCEEEEETTT-EEEEEEC---
T ss_pred eeEECCCCCEEEEcCCc-eEEEEEecCC
Confidence 99999999999997775 9999987654
No 110
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.30 E-value=0.002 Score=69.36 Aligned_cols=42 Identities=21% Similarity=0.187 Sum_probs=37.7
Q ss_pred CCCCCcceeEEcCCCeEEE-EeC-----------CCCEEEEEECCCCcEEEeec
Q 013348 75 QSLIFPWHLMKSEDDNLLI-INR-----------SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 75 ~~Ln~P~gL~~d~dG~LYI-ADa-----------gnh~IrkIDl~tG~I~Tiag 116 (444)
..|++|-+|+++++|+||| .|. +++++|++++.+|+++.++.
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~ 526 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV 526 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe
Confidence 4599999999999999999 786 47799999999999999884
No 111
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.29 E-value=0.0053 Score=64.71 Aligned_cols=75 Identities=13% Similarity=0.007 Sum_probs=57.4
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC--CCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG--RRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
.|++++++++|..|||+.. .+.|..||+. ++.+ .++. . =.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~-~-----------------------------------G~ 240 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIK-I-----------------------------------GS 240 (567)
T ss_dssp CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEE-C-----------------------------------CS
T ss_pred CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEe-c-----------------------------------CC
Confidence 5889999999999999974 5689999984 4432 2221 1 12
Q ss_pred CcceeEEc----CCC-eEEEEeCCCCEEEEEECCCCcEEE
Q 013348 79 FPWHLMKS----EDD-NLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 79 ~P~gL~~d----~dG-~LYIADagnh~IrkIDl~tG~I~T 113 (444)
.|.+++++ +|| .||+++...++|..||..|.++..
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 37899998 365 799999999999999999987543
No 112
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.0011 Score=66.76 Aligned_cols=73 Identities=12% Similarity=0.062 Sum_probs=53.9
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC-CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG-RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.|.||+++++++.||||||..++|+++++. +|.++.. . +| ..-..|
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~-----~--------------------------~~--~~~g~P 268 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL-----R--------------------------VL--SFDTLV 268 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE-----E--------------------------EE--ECSSEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC-----E--------------------------EE--eCCCCC
Confidence 589999999999999999999999999974 2332210 0 01 002458
Q ss_pred ceeEEcC-CCeEEEEeC-CCCEEEEEECC
Q 013348 81 WHLMKSE-DDNLLIINR-SFETLWIMDLA 107 (444)
Q Consensus 81 ~gL~~d~-dG~LYIADa-gnh~IrkIDl~ 107 (444)
-++++|. +|+||||.. +..+|.++|+.
T Consensus 269 DGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred ceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 8999999 599999764 55677777775
No 113
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.23 E-value=0.0016 Score=64.33 Aligned_cols=76 Identities=18% Similarity=0.235 Sum_probs=60.0
Q ss_pred Ccce---EEEecCCCEEEEEeC---------CCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCcc
Q 013348 2 RPAA---SFYHKDDDCLYIVDS---------ENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTK 68 (444)
Q Consensus 2 ~P~G---Ia~D~~g~~LYVADT---------eNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~ 68 (444)
+|.| ++++++++.|||+.. .++.|-.||+.++++ .+|. .|
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g-------------------------- 317 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LG-------------------------- 317 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CC--------------------------
Confidence 3666 899999999999864 346899999998876 5552 21
Q ss_pred ccCCCCCCCCCcceeEEcCCCe--EEEEeCCCCEEEEEECCCCcEEE
Q 013348 69 SEKLDPQSLIFPWHLMKSEDDN--LLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 69 ~~~~~~~~Ln~P~gL~~d~dG~--LYIADagnh~IrkIDl~tG~I~T 113 (444)
..||+++++.||. ||++..+.+.|..||+.++++..
T Consensus 318 ---------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 318 ---------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred ---------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 1378999999875 88888889999999999998653
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.96 E-value=0.0022 Score=62.34 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=61.0
Q ss_pred CcceEEEecCCCEEEEEeC---------CCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccC
Q 013348 2 RPAASFYHKDDDCLYIVDS---------ENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEK 71 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADT---------eNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~ 71 (444)
.| +++++++|+.||++.. ..+.|+.+|+.++. +.++.-.+.. ...
T Consensus 52 ~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~-------------------~~~----- 106 (361)
T 2oiz_A 52 NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR-------------------VQG----- 106 (361)
T ss_dssp EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB-------------------CCB-----
T ss_pred CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc-------------------ccc-----
Confidence 47 9999999999999985 24679999988764 4444311100 001
Q ss_pred CCCCCCCCcceeEEcCCC-eEEEEeCC-CCEEEEEECCCCcEEE
Q 013348 72 LDPQSLIFPWHLMKSEDD-NLLIINRS-FETLWIMDLASGEIKE 113 (444)
Q Consensus 72 ~~~~~Ln~P~gL~~d~dG-~LYIADag-nh~IrkIDl~tG~I~T 113 (444)
-..|.+++++++| .||+++.+ .+.|..||+.++++..
T Consensus 107 -----g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 107 -----LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVE 145 (361)
T ss_dssp -----CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEE
T ss_pred -----CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEE
Confidence 3569999999886 69999986 7899999999987643
No 115
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.86 E-value=0.014 Score=56.63 Aligned_cols=108 Identities=11% Similarity=0.157 Sum_probs=75.4
Q ss_pred EEecCCCEEEEEeCCC-------------CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCC
Q 013348 7 FYHKDDDCLYIVDSEN-------------HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLD 73 (444)
Q Consensus 7 a~D~~g~~LYVADTeN-------------HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~ 73 (444)
.++++|+.||.++..+ |.||++++..+..+.|.-. . +
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~--~-----------------~----------- 108 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD--P-----------------C----------- 108 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS--C-----------------E-----------
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC--C-----------------c-----------
Confidence 3456788999997654 7999999876644444211 0 0
Q ss_pred CCCCCCcceeEEcCCCeEEEEe---CCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccc
Q 013348 74 PQSLIFPWHLMKSEDDNLLIIN---RSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDS 150 (444)
Q Consensus 74 ~~~Ln~P~gL~~d~dG~LYIAD---agnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~ 150 (444)
..+++++ +.||.+| .++..|++++++....+.|..+..
T Consensus 109 -------~~~s~~g-~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~------------------------------- 149 (302)
T 3s25_A 109 -------IYASLIG-NYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL------------------------------- 149 (302)
T ss_dssp -------EEEEEET-TEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-------------------------------
T ss_pred -------cEEEEeC-CEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-------------------------------
Confidence 0234455 7899999 899999999998666665553210
Q ss_pred cccccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEe
Q 013348 151 SCSLKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNF 196 (444)
Q Consensus 151 ~~~~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~ 196 (444)
.| +...++.||.+|....+|.+++++++....+
T Consensus 150 ------~~-------~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 150 ------FT-------CNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp ------CC-------SEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred ------eE-------eeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 11 1235778999999889999999999988877
No 116
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.84 E-value=0.0019 Score=66.20 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=36.0
Q ss_pred CCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 77 LIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
|.+||+|+++++|.|||+++..++|++++..+|..++++
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~ 64 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVF 64 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 899999999999999999999899999998788887766
No 117
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.72 E-value=0.016 Score=56.23 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=75.5
Q ss_pred eEEEecCCCEEEEEe---CCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 5 ASFYHKDDDCLYIVD---SENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 5 GIa~D~~g~~LYVAD---TeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+.++.++++.||++| .++..|.++++.....+.|.-.. . .|+
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~----------------------------------~-~~~ 152 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY----------------------------------L-FTC 152 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC----------------------------------C-CCS
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC----------------------------------c-eEe
Confidence 456677888999999 78999999998654444443211 1 122
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccc
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAG 161 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~ 161 (444)
..++ +.||..+.+..+|++++++++..+.+..|... .|
T Consensus 153 --~~~g-~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~------------------------------------~~--- 190 (302)
T 3s25_A 153 --NTSD-RYFYYNNPKNGQLYRYDTASQSEALFYDCNCY------------------------------------KP--- 190 (302)
T ss_dssp --EEET-TEEEEECTTTCCEEEEETTTTEEEEEECSCEE------------------------------------EE---
T ss_pred --eEEC-CEEEEEeCCCceEEEEECCCCCEEEEeCCCcc------------------------------------ce---
Confidence 3445 68999999999999999988777766532110 01
Q ss_pred ccccccccCCeEEEEeCCC-CeEEEEeCCCCeEEEee
Q 013348 162 LISSSIAFQNHILLCDIVG-QRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 162 ~~Sgla~~~~~LyIADT~n-hRIRkvdl~tG~vST~~ 197 (444)
+...++.||.+|..+ .+|-+++++++....+.
T Consensus 191 ----~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 191 ----VVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT 223 (302)
T ss_dssp ----EEEETTEEEEEEGGGTTEEEEECSSSCCCEECS
T ss_pred ----eeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe
Confidence 112467788887653 68888888877766653
No 118
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.58 E-value=0.014 Score=62.78 Aligned_cols=84 Identities=12% Similarity=0.070 Sum_probs=60.9
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+|+|+.++|+|..+||++-....|-.+|+.+.... +.|.=.. .+ -.. +. ...=..|+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~-~~~~l~~------------~~-~v~--~~-------v~vG~gP~ 334 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV-FYENADP------------RS-AVV--AE-------PELGLGPL 334 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH-HHSCCCG------------GG-GEE--EC-------CBCCSCEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc-cccccCc------------cc-ceE--EE-------cCCCCCcc
Confidence 79999999999999999999999999998654211 1221000 00 000 00 00013599
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCC
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLAS 108 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~t 108 (444)
+++++++|.+|++.--..+|-+||.++
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999999999999999999999999876
No 119
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.58 E-value=0.0054 Score=61.52 Aligned_cols=84 Identities=21% Similarity=0.248 Sum_probs=57.0
Q ss_pred CCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccC
Q 013348 77 LIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKE 156 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~G 156 (444)
|..||+|++.++|.|||+++..++|++++..+|..+++.. .+.... . ...++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~-~~~v~~-~------------------------g~~GllG 84 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGE-VPGVSP-S------------------------GEGGLLG 84 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-CTTCCC-B------------------------TTBSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecc-cCceee-c------------------------CCCCcee
Confidence 9999999999999999999989999999988888766642 221100 0 1112223
Q ss_pred CCcccccccccccCCeEEEEeC--CCCeEEEEeCCC
Q 013348 157 LPYAGLISSSIAFQNHILLCDI--VGQRIMRLNRES 190 (444)
Q Consensus 157 ip~a~~~Sgla~~~~~LyIADT--~nhRIRkvdl~t 190 (444)
+++ +.=...++.||++.+ ..+||.|+.++.
T Consensus 85 ia~----~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 85 IAL----SPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEE----CTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred eEe----ccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 322 100013578999876 567999998876
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.56 E-value=0.08 Score=52.03 Aligned_cols=37 Identities=30% Similarity=0.331 Sum_probs=26.9
Q ss_pred cceeEEcCCCe-EEEEeC--CCCEEEEEECCCCcEEEeec
Q 013348 80 PWHLMKSEDDN-LLIINR--SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADa--gnh~IrkIDl~tG~I~Tiag 116 (444)
...++++++|. |+++-. ++.+||.+|+.+|++..+.+
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~ 264 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD 264 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC
Confidence 35677888876 554543 46689999999999877664
No 121
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.53 E-value=0.0044 Score=62.17 Aligned_cols=76 Identities=17% Similarity=0.068 Sum_probs=57.4
Q ss_pred Ccce---EEEecCCCEEEEEeC-C-C------CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCcccc
Q 013348 2 RPAA---SFYHKDDDCLYIVDS-E-N------HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSE 70 (444)
Q Consensus 2 ~P~G---Ia~D~~g~~LYVADT-e-N------HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~ 70 (444)
+|.| ++++++++.|||+.. . . ..+..||+.++++..-...|
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---------------------------- 313 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---------------------------- 313 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE----------------------------
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC----------------------------
Confidence 4666 899999999999865 2 1 24559999888653221111
Q ss_pred CCCCCCCCCcceeEEcCCCe-EEEEeC-CCCEEEEEECCCCcEE
Q 013348 71 KLDPQSLIFPWHLMKSEDDN-LLIINR-SFETLWIMDLASGEIK 112 (444)
Q Consensus 71 ~~~~~~Ln~P~gL~~d~dG~-LYIADa-gnh~IrkIDl~tG~I~ 112 (444)
..||+|+++.||. +|++.. +.+.|-+||+.|+++.
T Consensus 314 -------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 314 -------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp -------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred -------CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 1389999999875 999999 7999999999999765
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.45 E-value=0.074 Score=52.28 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=25.2
Q ss_pred cceeEEcCCCe-EEEEe--CCCCEEEEEECCCCcEEEee
Q 013348 80 PWHLMKSEDDN-LLIIN--RSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~-LYIAD--agnh~IrkIDl~tG~I~Tia 115 (444)
...++++++|. |+++- .+..+||.+|+.+|++..+.
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe
Confidence 34677888775 55443 24559999999998876654
No 123
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.41 E-value=0.013 Score=56.83 Aligned_cols=69 Identities=12% Similarity=0.173 Sum_probs=52.7
Q ss_pred cce---EEEecCCCEEEEEeC----------CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccc
Q 013348 3 PAA---SFYHKDDDCLYIVDS----------ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKS 69 (444)
Q Consensus 3 P~G---Ia~D~~g~~LYVADT----------eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~ 69 (444)
|.| ++++++++.|||+.. ..+.|..||+.++++..-... .
T Consensus 253 p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~------------------------~--- 305 (361)
T 2oiz_A 253 PGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG------------------------R--- 305 (361)
T ss_dssp ECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC------------------------T---
T ss_pred cCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec------------------------C---
Confidence 555 999999999999964 245899999988754321111 0
Q ss_pred cCCCCCCCCCcceeEEcCCC-eEEEEeCCCCEEEEEECCCC
Q 013348 70 EKLDPQSLIFPWHLMKSEDD-NLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 70 ~~~~~~~Ln~P~gL~~d~dG-~LYIADagnh~IrkIDl~tG 109 (444)
- |++|+++++| .||+++. +.|..||+++|
T Consensus 306 -------~--p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 306 -------D--ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp -------T--CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred -------C--eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 2 7899999885 5888885 89999999999
No 124
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.36 E-value=0.025 Score=60.75 Aligned_cols=52 Identities=23% Similarity=0.248 Sum_probs=42.4
Q ss_pred CCCCCCcceeEEcCCCeEEEEeC------------CCCEEEEEECCCCcEEEeecCCccceeecc
Q 013348 74 PQSLIFPWHLMKSEDDNLLIINR------------SFETLWIMDLASGEIKEAVKGFSKVLEICG 126 (444)
Q Consensus 74 ~~~Ln~P~gL~~d~dG~LYIADa------------gnh~IrkIDl~tG~I~TiagG~~~~~~~~G 126 (444)
...|++|=.|++++.|+|||+.= +|+++|.+++.+|++..|+.+ +...|.||
T Consensus 472 ~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG 535 (592)
T 3zwu_A 472 QNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTG 535 (592)
T ss_dssp TTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEE
T ss_pred CCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcC
Confidence 34599999999999999999854 578999999999999999963 44445555
No 125
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.95 E-value=0.44 Score=48.56 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=52.5
Q ss_pred cceEEEecCCCEEEEEeCCCC--eEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 3 PAASFYHKDDDCLYIVDSENH--AIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNH--aIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
+..++++++|..+|+++ .+. .|.++|+.++.+..+...... ...+. +. ...
T Consensus 244 ~~~~~~spdg~l~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~-------------~~~p~---------w~----~~~ 296 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATD-RTGWWNLHRVDPATGAATQLCRREEE-------------FAGPL---------WT----PGM 296 (662)
T ss_dssp EEEEEECTTSCEEEEEC-TTSSCEEEEECTTTCCEEESSCCSSB-------------SSCCC---------CS----TTC
T ss_pred EcceEECCCCeEEEEEC-CCCCeEEEEEECCCCceeeccccccc-------------ccCcc---------cc----ccC
Confidence 45678888887444444 334 788998877877766542100 00000 00 012
Q ss_pred ceeEEcCCCeEEE-EeCCCCEEEEEECCCCcEEEeec
Q 013348 81 WHLMKSEDDNLLI-INRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 81 ~gL~~d~dG~LYI-ADagnh~IrkIDl~tG~I~Tiag 116 (444)
..+++.+++.+|+ +..+..+||.+|+.+|.++++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp CSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCS
T ss_pred ceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecC
Confidence 3567766566554 44477789999999898887764
No 126
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.86 E-value=0.072 Score=56.12 Aligned_cols=108 Identities=14% Similarity=0.028 Sum_probs=71.0
Q ss_pred CCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCC-e
Q 013348 12 DDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDD-N 90 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG-~ 90 (444)
++.+||+....|.|..||..++.+..-...| ..|+++++++|| .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-----------------------------------~~p~~v~~SpDGr~ 210 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-----------------------------------YAVHISRLSASGRY 210 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-----------------------------------SCEEEEEECTTSCE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-----------------------------------CCccceEECCCCCE
Confidence 4589999999999999999988655322232 126688888886 5
Q ss_pred EEEEeCCCCEEEEEECC--CCcE-EEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccccccc
Q 013348 91 LLIINRSFETLWIMDLA--SGEI-KEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLISSSI 167 (444)
Q Consensus 91 LYIADagnh~IrkIDl~--tG~I-~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla 167 (444)
||+++. .+.|.+||+. ++++ .++..|.. +.++++ |.+-
T Consensus 211 lyv~~~-dg~V~viD~~~~t~~~v~~i~~G~~----------------------------------P~~ia~----s~~~ 251 (567)
T 1qks_A 211 LFVIGR-DGKVNMIDLWMKEPTTVAEIKIGSE----------------------------------ARSIET----SKME 251 (567)
T ss_dssp EEEEET-TSEEEEEETTSSSCCEEEEEECCSE----------------------------------EEEEEE----CCST
T ss_pred EEEEcC-CCeEEEEECCCCCCcEeEEEecCCC----------------------------------CceeEE----cccc
Confidence 899985 6799999995 6643 33332211 011111 1000
Q ss_pred -ccCCeEEEEeCCCCeEEEEeCCCCeE
Q 013348 168 -AFQNHILLCDIVGQRIMRLNRESGVC 193 (444)
Q Consensus 168 -~~~~~LyIADT~nhRIRkvdl~tG~v 193 (444)
.++..||++.-..+.|..+|..|..+
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred CCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 13567888888888888888777654
No 127
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.80 E-value=0.039 Score=57.77 Aligned_cols=90 Identities=18% Similarity=0.118 Sum_probs=59.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCC-C--eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGR-R--VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~t-g--~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
.|.+|+++++|..|||++.+.+.|+.+|..+ + ++.-...+|.. +. -..-+ ... +.-.
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~-------~~---~~~~~-~G~---------~~~g 381 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI-------FH---RADHP-AGH---------KLTG 381 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTT-------TT---CBCCT-TSC---------CCCS
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCe-------ec---ccccc-ccc---------cCCC
Confidence 4899999999999999999999999999742 2 22222222211 00 00000 000 0134
Q ss_pred CcceeEEcCCC-eEEEEe--------C-----CCCEEEEE--ECCCCcEE
Q 013348 79 FPWHLMKSEDD-NLLIIN--------R-----SFETLWIM--DLASGEIK 112 (444)
Q Consensus 79 ~P~gL~~d~dG-~LYIAD--------a-----gnh~IrkI--Dl~tG~I~ 112 (444)
.|+++.++.|| .||+|+ . .+.++.++ |.++| ++
T Consensus 382 gPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 382 APQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp CCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred CCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 69999999886 699999 3 66777755 88889 65
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.73 E-value=0.31 Score=42.44 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=25.7
Q ss_pred cceeEEcCCCe-EEEEeC---CCCEEEEEECCCCcEEEeec
Q 013348 80 PWHLMKSEDDN-LLIINR---SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADa---gnh~IrkIDl~tG~I~Tiag 116 (444)
+.+++++++|. |+++.. +..+||.+++.++.+..+..
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeec
Confidence 45677887765 444432 47899999998888766653
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.72 E-value=0.51 Score=41.02 Aligned_cols=38 Identities=8% Similarity=0.081 Sum_probs=27.4
Q ss_pred CcceeEEcCCCe-EEEEe--CCCCEEEEEECCCCcEEEeec
Q 013348 79 FPWHLMKSEDDN-LLIIN--RSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 79 ~P~gL~~d~dG~-LYIAD--agnh~IrkIDl~tG~I~Tiag 116 (444)
.+..+.++++|. |+++. .+..+||.+++.++.+..+..
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 346778888775 55553 567899999988888877653
No 130
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.63 E-value=1.5 Score=41.32 Aligned_cols=168 Identities=12% Similarity=0.159 Sum_probs=89.9
Q ss_pred CCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCCeE
Q 013348 12 DDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDNL 91 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~L 91 (444)
++.||+++. ++.|..+|..+|.+.=-...+... .+. ... . -.....+++++ +.|
T Consensus 53 ~~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~-------~~~-~~~------~----------~~~~~~~~~~~-~~v 106 (376)
T 3q7m_A 53 DNVVYAADR-AGLVKALNADDGKEIWSVSLAEKD-------GWF-SKE------P----------ALLSGGVTVSG-GHV 106 (376)
T ss_dssp TTEEEEECT-TSEEEEEETTTCCEEEEEECCC----------CC-SCC------C----------CCEEEEEEEET-TEE
T ss_pred CCEEEEEcC-CCeEEEEEccCCceeeeecCcccc-------ccc-ccc------C----------cccccCceEeC-CEE
Confidence 568999976 568999999888664222111010 000 000 0 00112334444 899
Q ss_pred EEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcccccccccccCC
Q 013348 92 LIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLISSSIAFQN 171 (444)
Q Consensus 92 YIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla~~~~ 171 (444)
|+... ++.|..+|+.+|++..-....... .+.....++
T Consensus 107 ~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~-----------------------------------------~~~p~~~~~ 144 (376)
T 3q7m_A 107 YIGSE-KAQVYALNTSDGTVAWQTKVAGEA-----------------------------------------LSRPVVSDG 144 (376)
T ss_dssp EEEET-TSEEEEEETTTCCEEEEEECSSCC-----------------------------------------CSCCEEETT
T ss_pred EEEcC-CCEEEEEECCCCCEEEEEeCCCce-----------------------------------------EcCCEEECC
Confidence 99874 579999999999875332110000 011123356
Q ss_pred eEEEEeCCCCeEEEEeCCCCeEEE-eeeccccccCCceeeeeccceeeecccccCCcccceeeeeecCCCeeeEEEeeeC
Q 013348 172 HILLCDIVGQRIMRLNRESGVCSN-FQFSNFAILGLPYWFAFPLERVYAVAGGHQGSWTDHIQRCSLLPGRIDIKVNVDI 250 (444)
Q Consensus 172 ~LyIADT~nhRIRkvdl~tG~vST-~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~v~~~pGri~i~v~v~~ 250 (444)
.||+. +.+..|..+|.++|.+.- +...+ ..+... -...| +...+..+.++....+..++...|++.-+.....
T Consensus 145 ~v~v~-~~~g~l~~~d~~tG~~~W~~~~~~-~~~~~~-~~~~~---~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 145 LVLIH-TSNGQLQALNEADGAVKWTVNLDM-PSLSLR-GESAP---TTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp EEEEE-CTTSEEEEEETTTCCEEEEEECCC------C-CCCCC---EEETTEEEECCTTTEEEEEETTTCCEEEEEECCC
T ss_pred EEEEE-cCCCeEEEEECCCCcEEEEEeCCC-Cceeec-CCCCc---EEECCEEEEEcCCCEEEEEECCCCcEEEEEeccc
Confidence 77776 456789999998887542 22211 111000 00112 1223334456667789999999998887777666
Q ss_pred CCC
Q 013348 251 PSD 253 (444)
Q Consensus 251 P~~ 253 (444)
|.+
T Consensus 219 ~~~ 221 (376)
T 3q7m_A 219 ATG 221 (376)
T ss_dssp ---
T ss_pred CCC
Confidence 644
No 131
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.62 E-value=0.28 Score=45.78 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=21.9
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEec
Q 013348 5 ASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVY 39 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVA 39 (444)
+.+++++|+.||++.. ++.|+.+|+.++....+.
T Consensus 85 ~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKD-GRNLMRVDLATLEENVVY 118 (388)
T ss_dssp SCEECTTSSEEEEEET-TTEEEEEETTTCCEEEEE
T ss_pred ceEEcCCCCEEEEEeC-CCeEEEEECCCCcceeee
Confidence 4567777777776664 356777777766655443
No 132
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.40 E-value=0.22 Score=50.44 Aligned_cols=73 Identities=5% Similarity=0.100 Sum_probs=47.3
Q ss_pred CCcceEEE--ecCCC--EEEEEeCCCCeEEEEEC---CCCeEEE-eccCCCcCccCCcchhhhhcccCcccccCccccCC
Q 013348 1 MRPAASFY--HKDDD--CLYIVDSENHAIRRADM---GRRVLET-VYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKL 72 (444)
Q Consensus 1 ~~P~GIa~--D~~g~--~LYVADTeNHaIRkIDl---~tg~VtT-VAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~ 72 (444)
..|+|+|+ ++..+ .+||.+.+ +.+..+++ .+|.++. +..+ |. .|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~------------f~---lg------------ 179 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRA------------FK---MN------------ 179 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEE------------EE---CS------------
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEE------------ec---CC------------
Confidence 36899999 77654 47888876 77777665 2332211 1111 00 00
Q ss_pred CCCCCCCcceeEEcCC-CeEEEEeCCCCEEEEEECC
Q 013348 73 DPQSLIFPWHLMKSED-DNLLIINRSFETLWIMDLA 107 (444)
Q Consensus 73 ~~~~Ln~P~gL~~d~d-G~LYIADagnh~IrkIDl~ 107 (444)
..|-++++|++ |.|||++-.. -||+||..
T Consensus 180 -----sq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~ 209 (355)
T 3amr_A 180 -----SQTEGMAADDEYGRLYIAEEDE-AIWKFSAE 209 (355)
T ss_dssp -----SCEEEEEEETTTTEEEEEETTT-EEEEEECS
T ss_pred -----CCcceEEEcCCCCeEEEecccc-eEEEEeCC
Confidence 13678889865 8999999985 59999954
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.32 E-value=0.25 Score=50.97 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=52.3
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCC---eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRR---VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg---~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
...++++++|+.|+++.. +.|+.+|+.++ .+..+.+.+ ..
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~-----------------------------------~~ 153 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGE-----------------------------------GF 153 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSS-----------------------------------SC
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCC-----------------------------------cc
Confidence 357899999998888876 88999998766 443332210 12
Q ss_pred cceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 80 PWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
+..+++++||. |+.+. +++||.+|+.+|+...+..
T Consensus 154 ~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEECCC
T ss_pred cccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEecc
Confidence 45677888876 44433 4589999999998877653
No 134
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.29 E-value=0.24 Score=50.44 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=53.3
Q ss_pred ceEEEecCCCEEEEEeCC-------CCeEEEEECC-CC---eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCC
Q 013348 4 AASFYHKDDDCLYIVDSE-------NHAIRRADMG-RR---VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKL 72 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTe-------NHaIRkIDl~-tg---~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~ 72 (444)
.+++++++|..|+++... +..|+.+|+. +| ....+.+..
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~------------------------------ 240 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP------------------------------ 240 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET------------------------------
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC------------------------------
Confidence 457899999988776533 2579999987 56 555554321
Q ss_pred CCCCCCCcceeEEcCCCeEEEEeCCCC--EEEEEECCCCcEEEeec
Q 013348 73 DPQSLIFPWHLMKSEDDNLLIINRSFE--TLWIMDLASGEIKEAVK 116 (444)
Q Consensus 73 ~~~~Ln~P~gL~~d~dG~LYIADagnh--~IrkIDl~tG~I~Tiag 116 (444)
-..+..+.+++||.||++-...+ +||++|+.+|+...+..
T Consensus 241 ----~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 241 ----EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp ----TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred ----CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc
Confidence 01134566777777766654444 99999998998887764
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.24 E-value=0.48 Score=48.67 Aligned_cols=85 Identities=14% Similarity=0.264 Sum_probs=53.7
Q ss_pred cceEEEecCCCEEEEEeCCC----CeEEEEECCCC-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSEN----HAIRRADMGRR-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeN----HaIRkIDl~tg-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
+..++++++|+.||++.... ..|+.+|+.+| .+.++...... .| .
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~--------~~----------------------~ 309 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK--------HY----------------------V 309 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS--------SC----------------------C
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC--------Ce----------------------E
Confidence 35688999998888854322 48999999888 77766532111 00 1
Q ss_pred CCcceeEEcC--CCeE-EEEeC-CCCEEEEEECCCCcEEEeecC
Q 013348 78 IFPWHLMKSE--DDNL-LIINR-SFETLWIMDLASGEIKEAVKG 117 (444)
Q Consensus 78 n~P~gL~~d~--dG~L-YIADa-gnh~IrkIDl~tG~I~TiagG 117 (444)
.....+++++ +|.+ |.++. +..+||.+|+.++.+.++..|
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 1123456666 6664 44433 457899999877778777653
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.16 E-value=0.26 Score=50.89 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=58.0
Q ss_pred CcceEEEecCCCEEEEEeCCCC-----eEEEEECCCCeEEEec-cCCCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENH-----AIRRADMGRRVLETVY-PTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNH-----aIRkIDl~tg~VtTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
.+..++++++|..|+++..... .|+.+|+.+|....+. +.+.. + .++.+. ..... ...+ .
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~-~~~~~~---~~~~~-~~~~--------~ 103 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL-P-GTETLS---DEEKA-RRER--------Q 103 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-------------------------------
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc-c-cccccc---chhhh-hhhh--------h
Confidence 3678999999999998877334 8999999988765444 32111 0 000000 00000 0000 0
Q ss_pred CC---CCcceeEEcCCCe-EEEEeCCCCEEEEEECCCC---cEEEeec
Q 013348 76 SL---IFPWHLMKSEDDN-LLIINRSFETLWIMDLASG---EIKEAVK 116 (444)
Q Consensus 76 ~L---n~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG---~I~Tiag 116 (444)
.+ .....+++++||. |+++.. ++||.+|+.+| .+..+..
T Consensus 104 ~~~~~~~v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~ 149 (741)
T 2ecf_A 104 RIAAMTGIVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH 149 (741)
T ss_dssp ---CCEESCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCC
T ss_pred hhccccCcceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEccc
Confidence 01 1246788998876 555554 89999999988 6665553
No 137
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.09 E-value=0.86 Score=40.78 Aligned_cols=36 Identities=6% Similarity=0.030 Sum_probs=28.0
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
+..+++++++.++++-..+++|+.+|+.++.+..+.
T Consensus 227 v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEc
Confidence 456778888777777777889999999988776544
No 138
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.02 E-value=0.67 Score=43.81 Aligned_cols=72 Identities=10% Similarity=0.237 Sum_probs=47.1
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA 160 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a 160 (444)
..+.+++ +.||+++. .+.|+.+|+.+|++..-......
T Consensus 271 ~~~~~~~-~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~~---------------------------------------- 308 (376)
T 3q7m_A 271 NDFIVDG-NRIYLVDQ-NDRVMALTIDGGVTLWTQSDLLH---------------------------------------- 308 (376)
T ss_dssp EEEEEET-TEEEEEET-TCCEEEEETTTCCEEEEECTTTT----------------------------------------
T ss_pred CCceEEC-CEEEEEcC-CCeEEEEECCCCcEEEeecccCC----------------------------------------
Confidence 3455554 89999985 56899999999987532210000
Q ss_pred cccccccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 161 GLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 161 ~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
...++....++.||+++. +..|..+|+++|.+.-
T Consensus 309 ~~~~~~~~~~~~l~v~~~-~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 309 RLLTSPVLYNGNLVVGDS-EGYLHWINVEDGRFVA 342 (376)
T ss_dssp SCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CcccCCEEECCEEEEEeC-CCeEEEEECCCCcEEE
Confidence 001122335788999975 5689999999998643
No 139
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.94 E-value=0.11 Score=54.44 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=56.7
Q ss_pred cCCCEEEEEeCCCCeEEEEECCCC-----eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeE
Q 013348 10 KDDDCLYIVDSENHAIRRADMGRR-----VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLM 84 (444)
Q Consensus 10 ~~g~~LYVADTeNHaIRkIDl~tg-----~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~ 84 (444)
.+++.|||.--..++|..||..+. .+.||-+.- . . .+ +. +..|.++.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~-~----------~-~~------~g----------~s~Ph~~~ 144 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEE-V----------K-KV------SG----------YSRLHTVH 144 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHH-H----------H-HH------HC----------EEEEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhh-c----------c-cc------cC----------CCccccee
Confidence 577899999999999999998644 555553220 0 0 01 11 45699999
Q ss_pred EcCCCeEEEEeCCC------CEEEEEECCCCcEEE
Q 013348 85 KSEDDNLLIINRSF------ETLWIMDLASGEIKE 113 (444)
Q Consensus 85 ~d~dG~LYIADagn------h~IrkIDl~tG~I~T 113 (444)
+.++| |||+..++ +.|..+|.+|+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEE
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEE
Confidence 99988 99999998 899999999988653
No 140
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.81 E-value=2.8 Score=39.69 Aligned_cols=124 Identities=15% Similarity=0.088 Sum_probs=67.6
Q ss_pred cceeEEcCCCeEEEEe---CCCCEEEEEECCCCcE--EEee-cCCccceeecceehhhhhhhhhcCCccccccccccccc
Q 013348 80 PWHLMKSEDDNLLIIN---RSFETLWIMDLASGEI--KEAV-KGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCS 153 (444)
Q Consensus 80 P~gL~~d~dG~LYIAD---agnh~IrkIDl~tG~I--~Tia-gG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~ 153 (444)
+..+++.++|.++++- ...++|+.+|+.++.. .... .....+.
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~------------------------------- 271 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL------------------------------- 271 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE-------------------------------
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee-------------------------------
Confidence 4567788888877776 6889999999987642 1111 0000000
Q ss_pred ccCCCcccccccccccCCeEEEEeCCCCeEEEEeCCCCe--EEEee-eccccccCCceeeee-ccceeeecccccCCccc
Q 013348 154 LKELPYAGLISSSIAFQNHILLCDIVGQRIMRLNRESGV--CSNFQ-FSNFAILGLPYWFAF-PLERVYAVAGGHQGSWT 229 (444)
Q Consensus 154 ~~Gip~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~--vST~~-fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~ 229 (444)
.+ .+...++.||++-...+.|+.+++.++. +..+. +...+ ....+.+ |-.. . .-...
T Consensus 272 --~~-------~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~---~v~~~~~sp~~~------~-~~s~~ 332 (402)
T 2aq5_A 272 --LP-------FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKE---SQRGMGYMPKRG------L-EVNKC 332 (402)
T ss_dssp --EE-------EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSS---CCSEEEECCGGG------S-CGGGT
T ss_pred --EE-------EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCC---cccceEEecccc------c-ceecc
Confidence 00 0123456788888888899999999887 55543 22111 1111111 2111 1 11223
Q ss_pred ceeeeeecCCCeeeEEEeeeCCCCc
Q 013348 230 DHIQRCSLLPGRIDIKVNVDIPSDT 254 (444)
Q Consensus 230 ~~i~~v~~~pGri~i~v~v~~P~~~ 254 (444)
+.++-+++.++++. .+...+|...
T Consensus 333 ~~~~~~~l~~~~~~-~i~~~~pr~~ 356 (402)
T 2aq5_A 333 EIARFYKLHERKCE-PIAMTVPRKS 356 (402)
T ss_dssp EEEEEEEEETTEEE-EEEEECCCCC
T ss_pred eeEEEEEcCCCcEE-EEEEEcccch
Confidence 45666677777665 4455666654
No 141
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.49 E-value=2.1 Score=38.16 Aligned_cols=35 Identities=20% Similarity=0.076 Sum_probs=27.1
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
...+++++++.++++-...+.|+.+|+.++.....
T Consensus 186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 220 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEECCCCceEee
Confidence 46778888777777777889999999998865433
No 142
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=94.06 E-value=0.39 Score=48.91 Aligned_cols=95 Identities=7% Similarity=0.077 Sum_probs=61.8
Q ss_pred CCCCCcceeEEcCCCeEEEEeCCC---------------CEEEEEECCCC--c-EEEeecCCccceeecceehhhhhhhh
Q 013348 75 QSLIFPWHLMKSEDDNLLIINRSF---------------ETLWIMDLASG--E-IKEAVKGFSKVLEICGVLVMEKVFLL 136 (444)
Q Consensus 75 ~~Ln~P~gL~~d~dG~LYIADagn---------------h~IrkIDl~tG--~-I~TiagG~~~~~~~~G~li~~~~a~l 136 (444)
..|.+..++.+|..|.|||-|+|. -+|..+|+.|+ + |+++. .+...-.
T Consensus 84 ~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~--~p~~~~~------------ 149 (381)
T 3q6k_A 84 KELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYY--FPTRLVE------------ 149 (381)
T ss_dssp CSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEE--CCGGGCC------------
T ss_pred cceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEE--CCHHhcc------------
Confidence 349999999999999999999982 27999999998 4 55554 2211000
Q ss_pred hcCCcccccccccccccccCCCcc-cccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 137 KQMPQDWLLHQIDSSCSLKELPYA-GLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~Gip~a-~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
+..+++ .+..- ..+.+ .-.++.+||+|+....|..+|+++|..-.+.
T Consensus 150 ---~~S~l~----------di~VD~~~~~~-~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 150 ---KPTYFG----------GFAVDVANPKG-DCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp ---CGGGEE----------EEEEEESCTTT-TSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ---cCCccc----------eEEEecccCCC-CCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 000000 00000 00000 0015689999999999999999999988874
No 143
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.01 E-value=2.7 Score=37.91 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=53.8
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
-..+++++++..|+.+. .++.|+..|+.++. +.++.+.. ...+
T Consensus 35 v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~-----------------------------------~~v~ 78 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCS-KDSSASVWYSLNGERLGTLDGHT-----------------------------------GTIW 78 (369)
T ss_dssp EEEEEECTTSCEEEEEE-SSSCEEEEETTTCCEEEEECCCS-----------------------------------SCEE
T ss_pred EEEEEEcCCCCEEEEEe-CCCEEEEEeCCCchhhhhhhhcC-----------------------------------CcEE
Confidence 35789999987666665 56789999987764 33343221 1124
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
.+++++++.++++-...+.|+.+|+.+++.....
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW 112 (369)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 6777777777777778899999999988765444
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.95 E-value=0.96 Score=46.46 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=26.0
Q ss_pred cceeEEcCCCe-EEEEeCCC----CEEEEEECCCC-cEEEee
Q 013348 80 PWHLMKSEDDN-LLIINRSF----ETLWIMDLASG-EIKEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagn----h~IrkIDl~tG-~I~Tia 115 (444)
+..+++++||. |+++.... .+|+.+|+.+| .+.++.
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 56788888876 66643221 48999999999 777665
No 145
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.57 E-value=4.9 Score=39.44 Aligned_cols=78 Identities=13% Similarity=0.005 Sum_probs=49.5
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++..++++-+.++.|+..|+.++.. .++.+.... -...+.
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~--------------------------------~~~v~~ 211 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ--------------------------------GSFVRD 211 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT--------------------------------TCCEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCC--------------------------------CceEEE
Confidence 45677777654555556667777777766543 233221100 002357
Q ss_pred eEEcCC-CeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKSED-DNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d~d-G~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+++.++ |.++++-...+.|+.+|+.+|+...
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 788888 8877777778999999999887543
No 146
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.57 E-value=1 Score=47.85 Aligned_cols=79 Identities=8% Similarity=0.026 Sum_probs=52.8
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
....|..+.+|.|||+-. ++-|.++|+.++.++.+.. .. |+|
T Consensus 540 ~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~--~~-----------------------------------gl~ 581 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQR--KE-----------------------------------GLP 581 (781)
T ss_dssp CEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECG--GG-----------------------------------TCS
T ss_pred eeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccc--cC-----------------------------------CCC
Confidence 456888888899999987 4333999999887765531 10 222
Q ss_pred ccccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEeee
Q 013348 159 YAGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQF 198 (444)
Q Consensus 159 ~a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~f 198 (444)
... +.++. ..++.|||+- ++-|.+++++++.+..+..
T Consensus 582 ~~~-i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 582 NTH-IRAISEDKNGNIWAST--NTGISCYITSKKCFYTYDH 619 (781)
T ss_dssp CCC-CCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEECG
T ss_pred Cce-EEEEEECCCCCEEEEc--CCceEEEECCCCceEEecc
Confidence 111 22322 3477899994 3449999999998888753
No 147
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.43 E-value=1.9 Score=39.04 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=22.9
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
+....++++.+|.|||+.. ++.|.++|.....+.
T Consensus 215 ~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~ 248 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKW 248 (330)
T ss_dssp CCCSCCEECTTSCEEEEET-TTEEEEECTTSCEEE
T ss_pred cceeceEECCCCeEEEEcC-CCeEEEECCCCCEeE
Confidence 3456777887788988875 457888876433333
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.40 E-value=0.36 Score=48.67 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=25.8
Q ss_pred ceeEEcCCCeEEE--E-eCCC-CEEEEEECCCCcEEEeec
Q 013348 81 WHLMKSEDDNLLI--I-NRSF-ETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 81 ~gL~~d~dG~LYI--A-Dagn-h~IrkIDl~tG~I~Tiag 116 (444)
+.+++++||...+ + |.++ ..||++|+.+|+++++.+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 6777888876544 2 2222 789999999999887764
No 149
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.27 E-value=3.4 Score=40.64 Aligned_cols=37 Identities=8% Similarity=-0.028 Sum_probs=27.6
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
...++++++|.++++-.....|+.+|.....+.++.+
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Confidence 4578888888888877788899999975445555543
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.19 E-value=4.5 Score=36.43 Aligned_cols=78 Identities=8% Similarity=0.071 Sum_probs=53.6
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCC-C-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGR-R-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~t-g-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
....+++++++..|+++. .++.|+..|+.+ + .+.++.+. -..
T Consensus 177 ~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-----------------------------------~~~ 220 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLH-----------------------------------EKS 220 (369)
T ss_dssp CEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEECC-----------------------------------SSC
T ss_pred ceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEecC-----------------------------------CCc
Confidence 356788988887777665 468999999876 3 23333221 111
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
...+++++++.++++-...+.|+.+|+.++......
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 346777777877777778889999999988765444
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.19 E-value=1.1 Score=41.63 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=24.4
Q ss_pred eeEEcCCCe-E-EEEeCCCC---EEEEEECCCCcEEEee
Q 013348 82 HLMKSEDDN-L-LIINRSFE---TLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG~-L-YIADagnh---~IrkIDl~tG~I~Tia 115 (444)
.+++++||. | |+++.... +|+++|+.+|+.+.+.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE
Confidence 456777765 5 66765433 4999999999987765
No 152
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.09 E-value=0.75 Score=44.72 Aligned_cols=32 Identities=16% Similarity=0.070 Sum_probs=25.2
Q ss_pred cceeEEcCC---CeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSED---DNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~d---G~LYIADagnh~IrkIDl~tG~I 111 (444)
.+.|+++++ +.++++-...++|+.||+.++..
T Consensus 198 v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 198 LTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp EEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred eEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 467888887 77777767788999999988763
No 153
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.97 E-value=1.7 Score=40.12 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=15.9
Q ss_pred CCCEEEEEECCCCcEEEeec
Q 013348 97 SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 97 gnh~IrkIDl~tG~I~Tiag 116 (444)
+...|+++|+.+|.+..+..
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEE
T ss_pred CCCcEEEEecccCceEEccC
Confidence 56789999999988766653
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.94 E-value=1 Score=43.69 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=49.3
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
.+|+|+|.+..++++=+..+.||..|+.++.+.++...... -..-..+
T Consensus 168 ~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--------------------------------~~~~~~~ 215 (435)
T 4e54_B 168 TGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI--------------------------------NIWFCSL 215 (435)
T ss_dssp CEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC--------------------------------SCCCCCE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC--------------------------------CccEEEE
Confidence 45777764323444445667788888777766666543211 0112356
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
.+++++.++++-...+.|+.+|+.+..+.++
T Consensus 216 ~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~ 246 (435)
T 4e54_B 216 DVSASSRMVVTGDNVGNVILLNMDGKELWNL 246 (435)
T ss_dssp EEETTTTEEEEECSSSBEEEEESSSCBCCCS
T ss_pred EECCCCCEEEEEeCCCcEeeeccCcceeEEE
Confidence 6777788888888889999999876555444
No 155
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.94 E-value=3.1 Score=37.54 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=52.0
Q ss_pred ceEEEecCC--CEEEEEeCCCCeEEEEECCC-CeE--EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 4 AASFYHKDD--DCLYIVDSENHAIRRADMGR-RVL--ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 4 ~GIa~D~~g--~~LYVADTeNHaIRkIDl~t-g~V--tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
..+++++++ +.+.++=+.++.||..|+.+ +.. .++.+.. .
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----------------------------------~ 87 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT-----------------------------------G 87 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS-----------------------------------S
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc-----------------------------------C
Confidence 578888884 23444445678899999875 322 3333221 1
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
....+++.+++.++++-...+.|+.+|+.++.+..+.+
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 12467787777777777788999999999998766543
No 156
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.86 E-value=2 Score=45.62 Aligned_cols=77 Identities=16% Similarity=0.252 Sum_probs=53.8
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
....|..+.+|.|||+-.+ -|.++|+.++.++.+.. .. |+|
T Consensus 544 ~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~--~~-----------------------------------gl~ 584 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYNT--TN-----------------------------------GLP 584 (795)
T ss_dssp CEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEECG--GG-----------------------------------TCS
T ss_pred eeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeCC--CC-----------------------------------CCc
Confidence 4567888888999999875 79999999888776531 00 222
Q ss_pred ccccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 159 YAGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 159 ~a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
.. .+.++. ..++.|||+- ++-|.+++++++.+.++.
T Consensus 585 ~~-~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 585 NN-VVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp CS-CEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEEC
T ss_pred hh-heEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcC
Confidence 11 122332 3467899986 467999999999888775
No 157
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.82 E-value=4.2 Score=37.52 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=24.7
Q ss_pred cceeEEcCCCe-EEEE-e-CCCCE--EEEEECCCCcEEEee
Q 013348 80 PWHLMKSEDDN-LLII-N-RSFET--LWIMDLASGEIKEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~-LYIA-D-agnh~--IrkIDl~tG~I~Tia 115 (444)
+..++++++|. |+++ . .+..+ |+++|+.+|.+..+.
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM 280 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee
Confidence 44567888765 4444 3 34445 999999999887665
No 158
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.67 E-value=2 Score=39.92 Aligned_cols=88 Identities=11% Similarity=0.028 Sum_probs=54.3
Q ss_pred cceEEEecCCCEEEEEeCCC--CeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSEN--HAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeN--HaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
...+++++++..|+++...+ +.|+..|+.++. +.++.+.... .... . .+. +. -..
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~---~~~~---~---~~~---~~----------~~~ 293 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS---SQAS---L---GEF---AH----------SSW 293 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-----------------CCB---SB----------SSC
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc---cccc---c---ccc---cc----------CCc
Confidence 45788888887666655432 789999987664 4555442111 0000 0 000 00 123
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
...+++++++.++++-...++|+.||+.+++..
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 467888888888888888999999999988653
No 159
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.60 E-value=3.6 Score=38.30 Aligned_cols=80 Identities=16% Similarity=0.105 Sum_probs=49.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
.++++++.+..++++=+.++.||..|+.++.+.++.+.... -.....+
T Consensus 122 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------------------------------~~~v~~~ 169 (383)
T 3ei3_B 122 TGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSW--------------------------------DYWYCCV 169 (383)
T ss_dssp EEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCS--------------------------------SCCEEEE
T ss_pred eEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCC--------------------------------CCCeEEE
Confidence 45667663223333334567777777776666665543211 1223577
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
++.+++.++++-...+.|+.+|+....+.++.
T Consensus 170 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 201 (383)
T 3ei3_B 170 DVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK 201 (383)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred EECCCCCEEEEECCCCCEEEEECCCCEEEEec
Confidence 78888777777778899999999655555554
No 160
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.60 E-value=3 Score=39.78 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=24.8
Q ss_pred cceeEEcCC-CeEEEEeCCCCEEEEEECCCCc-EEEee
Q 013348 80 PWHLMKSED-DNLLIINRSFETLWIMDLASGE-IKEAV 115 (444)
Q Consensus 80 P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~-I~Tia 115 (444)
+..+++.++ +.++++-..++.|+.+|+.+++ +.++.
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~ 254 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA 254 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc
Confidence 456777764 5677777788999999998875 34443
No 161
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.51 E-value=4.5 Score=39.82 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=29.3
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
.+++++.+++.++++-...+.|+.+|+.+..+.++.+
T Consensus 306 v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~ 342 (577)
T 2ymu_A 306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTG 342 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeC
Confidence 4678888888887877788899999988777776653
No 162
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.46 E-value=1.4 Score=46.80 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=53.6
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
+.+..++.+.+|.|||+-.++. |.++|+.++.++.+.. .. ++
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~--~~-----------------------------------~l 536 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQ--YE-----------------------------------GF 536 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECT--TT-----------------------------------TC
T ss_pred ceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccC--CC-----------------------------------CC
Confidence 4577899999999999987544 8889999888776642 10 11
Q ss_pred Cccccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 158 PYAGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 158 p~a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
|. ..+.++. ..++.|||+-. +.-|.++|.+++.+..+.
T Consensus 537 ~~-~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 537 CS-NTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp SC-SCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEEC
T ss_pred CC-CeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEcc
Confidence 11 0122222 34678999865 443388999988877764
No 163
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.45 E-value=1.1 Score=48.40 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=23.2
Q ss_pred CCCEEEEEeCCCCeEEEEECCCCeEE
Q 013348 11 DDDCLYIVDSENHAIRRADMGRRVLE 36 (444)
Q Consensus 11 ~g~~LYVADTeNHaIRkIDl~tg~Vt 36 (444)
+|..|||+|..|++|.+||+.+.++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~ 125 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCD 125 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEe
Confidence 57799999999999999999997643
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.30 E-value=0.98 Score=45.50 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=48.8
Q ss_pred ceEEEecCCCEEEEEe--CCC-CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVD--SEN-HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVAD--TeN-HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++|..|+.+- .+| ..|+.+|+.+|.+.++.+.... .
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~-----------------------------------~ 197 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGS-----------------------------------F 197 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCE-----------------------------------E
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCc-----------------------------------c
Confidence 3567788888777442 223 5688888888877776433100 1
Q ss_pred ceeEEcCCCe-EEEEeCCC-CEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDN-LLIINRSF-ETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~-LYIADagn-h~IrkIDl~tG~I~ 112 (444)
..+++++||. ||.++... .+|+++|+++|+..
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 3566777775 55444433 48999999999987
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.29 E-value=3.6 Score=39.31 Aligned_cols=74 Identities=19% Similarity=0.162 Sum_probs=53.0
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..++|++++..|+.+ +..+.||..|+.++.+. ++.|.. ..-+.
T Consensus 127 ~~v~~s~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~~~h~-----------------------------------~~v~~ 170 (393)
T 1erj_A 127 RSVCFSPDGKFLATG-AEDRLIRIWDIENRKIVMILQGHE-----------------------------------QDIYS 170 (393)
T ss_dssp EEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCS-----------------------------------SCEEE
T ss_pred EEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEccCC-----------------------------------CCEEE
Confidence 468999998765555 46789999999887543 333221 01246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+++.++|..+++-...++|+.||+.+|....
T Consensus 171 ~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 171 LDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence 7777778878888889999999999987543
No 166
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.28 E-value=0.76 Score=46.56 Aligned_cols=72 Identities=15% Similarity=0.064 Sum_probs=53.0
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECC-----CCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCC
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMG-----RRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQS 76 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~-----tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~ 76 (444)
+|.|+++|+..+.|||++-. ..|.+++.. ++++--..+.+.
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~--------------------------------- 226 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRH--------------------------------- 226 (355)
T ss_dssp CEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSS---------------------------------
T ss_pred CcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCc---------------------------------
Confidence 58899999888899999987 669999954 233332322211
Q ss_pred CC-CcceeEEc--CC--CeEEEEeCCCCEEEEEECC
Q 013348 77 LI-FPWHLMKS--ED--DNLLIINRSFETLWIMDLA 107 (444)
Q Consensus 77 Ln-~P~gL~~d--~d--G~LYIADagnh~IrkIDl~ 107 (444)
|. .|.||++. .+ |.|++++.++++.-.+|..
T Consensus 227 l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 227 LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 22 46788874 22 5699999999999999996
No 167
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.25 E-value=0.39 Score=48.86 Aligned_cols=62 Identities=11% Similarity=0.325 Sum_probs=47.5
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEECCC-----CeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 5 ASFYHKDDDCLYIVDSENHAIRRADMGR-----RVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeNHaIRkIDl~t-----g~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
|+++|+..+.||+++.++++|.+.+..+ +.+.+|+=. + +|..
T Consensus 279 ~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d--------------------------------~-~l~~ 325 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS--------------------------------S-RFVF 325 (381)
T ss_dssp EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC--------------------------------T-TCCS
T ss_pred eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC--------------------------------C-Cccc
Confidence 5788744458999999999999999765 345555422 1 2999
Q ss_pred cceeEEcCCCeEEEEeCCCC
Q 013348 80 PWHLMKSEDDNLLIINRSFE 99 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh 99 (444)
|-++.++.+|.||+.-..-+
T Consensus 326 pd~~~i~~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 326 GTDISVDSKGGLWFMSNGFP 345 (381)
T ss_dssp EEEEEECTTSCEEEEECSCC
T ss_pred cCeEEECCCCeEEEEECcch
Confidence 99999998899999876544
No 168
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.12 E-value=5 Score=37.44 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=48.4
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++..|..+ +.++.||..|+.++.. .++.|.. .....
T Consensus 168 ~~~~~spdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~h~-----------------------------------~~v~~ 211 (321)
T 3ow8_A 168 LSIAYSPDGKYLASG-AIDGIINIFDIATGKLLHTLEGHA-----------------------------------MPIRS 211 (321)
T ss_dssp EEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCS-----------------------------------SCCCE
T ss_pred EEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEcccC-----------------------------------CceeE
Confidence 456777777644444 3456777777766643 3332210 11246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+++++++.++++=...+.|+.+|+.++....
T Consensus 212 l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 212 LTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp EEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 7888888888888888999999998876543
No 169
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.61 E-value=3.4 Score=40.05 Aligned_cols=76 Identities=18% Similarity=0.159 Sum_probs=52.2
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECC--CC-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMG--RR-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~--tg-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
..++++++++..||++-+.++.|+..|+. ++ .+.++.+.+. -..
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---------------------------------~~~ 151 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---------------------------------SKR 151 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---------------------------------SSC
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---------------------------------CCC
Confidence 46899999998887777788999999986 44 3333332110 123
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
+..++++++|.++++-.....|+.+++.++..
T Consensus 152 v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 152 PNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred ceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 56788888776444444588899999887654
No 170
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.55 E-value=4.6 Score=44.35 Aligned_cols=75 Identities=15% Similarity=0.029 Sum_probs=49.3
Q ss_pred cceEEEe-cCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYH-KDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D-~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+.+++++ ++|..|+++. ...|+.+++.++.+..+.+.... .++
T Consensus 298 v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~----------------------------------~~~ 341 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRI----------------------------------RYV 341 (1045)
T ss_dssp GGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCE----------------------------------EEE
T ss_pred cceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcc----------------------------------eEE
Confidence 5789999 9998777766 57888888877766655332110 123
Q ss_pred eeEEcCCCe-EEEEeCCCCEEE-EEECCCCcEEEee
Q 013348 82 HLMKSEDDN-LLIINRSFETLW-IMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG~-LYIADagnh~Ir-kIDl~tG~I~Tia 115 (444)
+++++ +|. |+.+.. ..+|| .+|+.++.+..+.
T Consensus 342 ~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp EECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC
T ss_pred eeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec
Confidence 44445 443 444333 67999 9999988887766
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.42 E-value=2.2 Score=39.07 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=20.8
Q ss_pred eeEEcCCCeEEEEeCC--------CCEEEEEECCCCcEEEeec
Q 013348 82 HLMKSEDDNLLIINRS--------FETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 82 gL~~d~dG~LYIADag--------nh~IrkIDl~tG~I~Tiag 116 (444)
.+.++++|-+|++... ..+||.+| +|+++.+..
T Consensus 175 ~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 175 SGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp EEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred cccCCCCeEEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 4455666644444332 45899999 788777764
No 172
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.28 E-value=2.1 Score=39.08 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=52.2
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCC---eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRR---VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg---~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++++.|+++ +.++.|+..|+.++ .+.++.+.. ...
T Consensus 12 ~~~~~s~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~h~-----------------------------------~~v 55 (372)
T 1k8k_C 12 SCHAWNKDRTQIAIC-PNNHEVHIYEKSGNKWVQVHELKEHN-----------------------------------GQV 55 (372)
T ss_dssp CEEEECTTSSEEEEE-CSSSEEEEEEEETTEEEEEEEEECCS-----------------------------------SCE
T ss_pred EEEEECCCCCEEEEE-eCCCEEEEEeCCCCcEEeeeeecCCC-----------------------------------Ccc
Confidence 578999998766655 45789999999888 455554321 112
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..+++.+++.++++-...+.|+.+|+.++...
T Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 56 TGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred cEEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 46777777777776667889999999888643
No 173
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=91.16 E-value=4.1 Score=36.75 Aligned_cols=75 Identities=9% Similarity=-0.089 Sum_probs=49.8
Q ss_pred cceEEEecCCCEEEEEeCC---CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSE---NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTe---NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
...+++++++..|+++-+. ++.|+..|+.++....+.-.+.. ..
T Consensus 21 v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~---------------------------------~~ 67 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA---------------------------------KP 67 (357)
T ss_dssp EEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES---------------------------------SC
T ss_pred eEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc---------------------------------Cc
Confidence 4678999988777777665 89999999887765433211101 01
Q ss_pred cceeEEcCC---CeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSED---DNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~d---G~LYIADagnh~IrkIDl~tG~ 110 (444)
...+++.++ |.++++-...+.|+.+|+.++.
T Consensus 68 v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 101 (357)
T 3i2n_A 68 IKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE 101 (357)
T ss_dssp EEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS
T ss_pred EEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC
Confidence 134555554 5666666678899999998875
No 174
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.15 E-value=8.4 Score=34.77 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=36.2
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCeEEEeeeccccccCCceeeeeccceeee-cccccCCcccceeeeeecCCCeeeEE
Q 013348 170 QNHILLCDIVGQRIMRLNRESGVCSNFQFSNFAILGLPYWFAFPLERVYA-VAGGHQGSWTDHIQRCSLLPGRIDIK 245 (444)
Q Consensus 170 ~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g~lg~P~~l~~PL~~v~~-~~~~~~g~~~~~i~~v~~~pGri~i~ 245 (444)
++.||++.. ++.|.+++.++..+..+...+ +.... | +.+ .++..-++....|..++. .|+..-+
T Consensus 225 ~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~-~~~~~------~---~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~ 289 (330)
T 3hxj_A 225 DGTIYVTSL-DGHLYAINPDGTEKWRFKTGK-RIESS------P---VIGNTDTIYFGSYDGHLYAINP-DGTEKWN 289 (330)
T ss_dssp TSCEEEEET-TTEEEEECTTSCEEEEEECSS-CCCSC------C---EECTTSCEEEECTTCEEEEECT-TSCEEEE
T ss_pred CCeEEEEcC-CCeEEEECCCCCEeEEeeCCC-Ccccc------c---eEcCCCeEEEecCCCCEEEECC-CCcEEEE
Confidence 558999865 567888887666665553221 11111 1 222 344445566667888875 6765433
No 175
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.06 E-value=2.7 Score=43.91 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=45.3
Q ss_pred CCEEEEEeCCCCeEEEEEC-CCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCCe
Q 013348 12 DDCLYIVDSENHAIRRADM-GRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDN 90 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl-~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~ 90 (444)
++.|||+...++.|..+|+ .+|.+. |.+..... ...... . -. -....++++++ +.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~---------------W~~~~~~~-~~~~~~---~--~~--~~~~~~~~~~~-~~ 117 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIV---------------WQHKPKQD-ASTKAV---M--CC--DVVDRGLAYGA-GQ 117 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEE---------------EEECCCCC-GGGGGG---C--TT--CSCCCCCEEET-TE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEE---------------EEEcCCCC-cccccc---c--cc--cccccccEEEC-CE
Confidence 5589999876788999998 777553 22110000 000000 0 00 00012445655 79
Q ss_pred EEEEeCCCCEEEEEECCCCcEEE
Q 013348 91 LLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 91 LYIADagnh~IrkIDl~tG~I~T 113 (444)
||+.. ..+++..+|+.||++.-
T Consensus 118 v~v~~-~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 118 IVKKQ-ANGHLLALDAKTGKINW 139 (571)
T ss_dssp EEEEC-TTSEEEEEETTTCCEEE
T ss_pred EEEEe-CCCEEEEEECCCCCEEE
Confidence 99985 46789999999998754
No 176
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.81 E-value=6.2 Score=37.64 Aligned_cols=93 Identities=15% Similarity=0.168 Sum_probs=54.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..++|+++|..|..+ .+..|+..+..+|.. .++.+...... +......... +..-..-..
T Consensus 68 ~~v~fspdg~~la~g--~~~~v~i~~~~~g~~~~~l~~~~~~~~----------~~~~~~~~~~-------~~~~~~v~~ 128 (393)
T 1erj_A 68 CCVKFSNDGEYLATG--CNKTTQVYRVSDGSLVARLSDDSAANK----------DPENLNTSSS-------PSSDLYIRS 128 (393)
T ss_dssp CEEEECTTSSEEEEE--CBSCEEEEETTTCCEEEEECC----------------------------------CCCCBEEE
T ss_pred EEEEECCCCCEEEEE--cCCcEEEEEecCCCEEEEecCcccccc----------cccccccccc-------CCCceeEEE
Confidence 468899999766554 367899999887754 44544321100 0000000000 000112457
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
++++++|.++++-...+.|+.+|+.++++....
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~ 161 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL 161 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 889998888888888999999999998765444
No 177
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.78 E-value=2.1 Score=47.09 Aligned_cols=39 Identities=8% Similarity=0.102 Sum_probs=30.5
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
..+..++++++|..++.-...+.|+.+|+.+|++..+..
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 456788999988755555566799999999999887763
No 178
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.65 E-value=5.3 Score=36.79 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=52.8
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
...+++++++..|+++.. ++.|+..|.....+.++.+.. .....
T Consensus 111 v~~~~~s~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-----------------------------------~~v~~ 154 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVE-NGELRLWNKTGALLNVLNFHR-----------------------------------APIVS 154 (425)
T ss_dssp EEEEEECTTSSEEEEEET-TSCEEEEETTSCEEEEECCCC-----------------------------------SCEEE
T ss_pred eEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCeeeeccCCC-----------------------------------ccEEE
Confidence 457889998877776654 678999986555565554321 11346
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
+++.+++.++++-...+.|+.+|+.++......
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 155 VKWNKDGTHIISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp EEECTTSSEEEEEETTCCEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEecCCeEEEEECCCCcEEEEe
Confidence 777777776666667889999999988754433
No 179
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.61 E-value=7 Score=36.13 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=51.5
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccC-CCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPT-SGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGt-G~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
...+++++++ ++++-+.++.|+..|+.++.. .++.+. +.. .. -...
T Consensus 189 i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~--------------------~~----------~~~i 236 (397)
T 1sq9_A 189 ATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMI--------------------NN----------SNSI 236 (397)
T ss_dssp CCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC-----------------------CC----------CCCE
T ss_pred ceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEecccccc--------------------cc----------CCcc
Confidence 4678999887 555566789999999987643 333320 000 00 1123
Q ss_pred ceeEEcCCCeEEEEeCCC---CEEEEEECCCCcEEE
Q 013348 81 WHLMKSEDDNLLIINRSF---ETLWIMDLASGEIKE 113 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagn---h~IrkIDl~tG~I~T 113 (444)
..+++++++.++++-... +.|+.||+.+++...
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence 567777777777766666 899999999886543
No 180
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.54 E-value=5.8 Score=41.65 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=44.4
Q ss_pred eEEEecCCCEEEEEeC---CCCeEEEEECCCC--eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 5 ASFYHKDDDCLYIVDS---ENHAIRRADMGRR--VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 5 GIa~D~~g~~LYVADT---eNHaIRkIDl~tg--~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
+++++++|..|+|.-. .++.|+.+|+.++ ...++...... ..+
T Consensus 238 ~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~--------------------------------~~~ 285 (693)
T 3iuj_A 238 GATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA--------------------------------DVS 285 (693)
T ss_dssp EEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS--------------------------------CEE
T ss_pred EEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc--------------------------------eEE
Confidence 6778888887766432 3358888887654 44444322100 112
Q ss_pred cceeEEcCCCeEEEEe-C--CCCEEEEEECCCCcE---EEee
Q 013348 80 PWHLMKSEDDNLLIIN-R--SFETLWIMDLASGEI---KEAV 115 (444)
Q Consensus 80 P~gL~~d~dG~LYIAD-a--gnh~IrkIDl~tG~I---~Tia 115 (444)
| +.-++ +.||+.- . .+.+|+++|++++.. +++.
T Consensus 286 ~--~~~~g-~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 286 L--VDNKG-STLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp E--EEEET-TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred E--EeccC-CEEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 2 22233 5676653 2 368999999988754 5555
No 181
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.19 E-value=6.1 Score=34.83 Aligned_cols=71 Identities=4% Similarity=-0.019 Sum_probs=47.4
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCC-----eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRR-----VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg-----~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
..+++++++..|+.+. .++.||..|+.++ .+.++.+.. .
T Consensus 15 ~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~-----------------------------------~ 58 (351)
T 3f3f_A 15 HDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHD-----------------------------------S 58 (351)
T ss_dssp EEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCS-----------------------------------S
T ss_pred eEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceeccCC-----------------------------------C
Confidence 5789999887666664 5789999998754 223332221 1
Q ss_pred CcceeEEcC--CCeEEEEeCCCCEEEEEECCCCc
Q 013348 79 FPWHLMKSE--DDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 79 ~P~gL~~d~--dG~LYIADagnh~IrkIDl~tG~ 110 (444)
....+++.+ ++.++++=...+.|+.+|+.++.
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 124566665 46777777778899999988764
No 182
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.14 E-value=3.3 Score=43.66 Aligned_cols=120 Identities=11% Similarity=0.094 Sum_probs=75.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
..|+.|.+| .|||+...++-|-++|+.++.++.+...+.. . -+.+..+
T Consensus 475 ~~i~~d~~g-~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~---------------------~----------~~~~~~i 522 (758)
T 3ott_A 475 NQIIPDNEG-NVWVLLYNNKGIDKINPRTREVTKLFADELT---------------------G----------EKSPNYL 522 (758)
T ss_dssp EEEEECTTS-CEEEEETTCSSEEEEETTTTEEEEECTTTSC---------------------G----------GGCEEEE
T ss_pred eeEEEcCCC-CEEEEccCCCCcEEEeCCCCceEEecCCCcC---------------------C----------CcccceE
Confidence 457777666 5998444346688899888888776321100 0 1235678
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccc
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLI 163 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~ 163 (444)
..+.+|.|||+-. +-|.++|+.++.++.+.. . |+|. ..+
T Consensus 523 ~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~--~------------------------------------gl~~-~~i 561 (758)
T 3ott_A 523 LCDEDGLLWVGFH--GGVMRINPKDESQQSISF--G------------------------------------SFSN-NEI 561 (758)
T ss_dssp EECTTSCEEEEET--TEEEEECC--CCCCBCCC--C------------------------------------C----CCE
T ss_pred EECCCCCEEEEec--CceEEEecCCCceEEecc--c------------------------------------CCCc-cce
Confidence 8998999999964 469999998877654420 0 1111 112
Q ss_pred ccccccCCeEEEEeCCCCeEEEEeCCCCeEEEeee
Q 013348 164 SSSIAFQNHILLCDIVGQRIMRLNRESGVCSNFQF 198 (444)
Q Consensus 164 Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~~f 198 (444)
.++...++.|||+- ++-|.+++++++.+..+..
T Consensus 562 ~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~ 594 (758)
T 3ott_A 562 LSMTCVKNSIWVST--TNGLWIIDRKTMDARQQNM 594 (758)
T ss_dssp EEEEEETTEEEEEE--SSCEEEEETTTCCEEEC--
T ss_pred EEEEECCCCEEEEC--CCCeEEEcCCCceeEEecC
Confidence 33444578999986 3459999999998877643
No 183
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=90.07 E-value=2.1 Score=45.59 Aligned_cols=77 Identities=12% Similarity=0.015 Sum_probs=45.4
Q ss_pred CCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCCeE
Q 013348 12 DDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDNL 91 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~L 91 (444)
++.|||+.. ++.|..+|..+|.+. |.+..... ...... .+. -....++++++ +.|
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~~~---------------W~~~~~~~-~~~~~~----~~~---~~~~~~~a~~~-~~v 131 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGNRI---------------WTYDPQID-RSTGFK----GCC---DVVNRGVALWK-GKV 131 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTEEE---------------EEECCCCC-GGGGGG----SSS---CSCCCCCEEET-TEE
T ss_pred CCEEEEECC-CCeEEEEECCCCcEE---------------EEEcCCCC-cccccc----ccc---cCCCCCceEEC-CEE
Confidence 558999976 567999998887653 22220000 000000 000 01123556665 799
Q ss_pred EEEeCCCCEEEEEECCCCcEEEe
Q 013348 92 LIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 92 YIADagnh~IrkIDl~tG~I~Ti 114 (444)
|+.. ..++|..+|+.||++..-
T Consensus 132 ~v~~-~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 132 YVGA-WDGRLIALDAATGKEVWH 153 (677)
T ss_dssp EEEC-TTSEEEEEETTTCCEEEE
T ss_pred EEEc-CCCEEEEEECCCCCEEee
Confidence 9984 568999999999987533
No 184
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=89.99 E-value=3.3 Score=39.56 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=47.6
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+..+++++.+..++++=+.++.||..|+.++. +.++.|.. ..-+
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-----------------------------------~~v~ 261 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-----------------------------------QCVT 261 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-----------------------------------SCEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-----------------------------------CCEE
Confidence 34566766655566666667777777776542 33333221 1124
Q ss_pred eeEEcCCC-eEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 82 HLMKSEDD-NLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG-~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
.|++.++| .++++-...++|+.+|..+|++..+.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~ 296 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQ 296 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCEEEEEC
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEc
Confidence 67777766 45555667788999999998875543
No 185
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.91 E-value=0.4 Score=46.27 Aligned_cols=67 Identities=16% Similarity=0.108 Sum_probs=47.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCC-------CeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGR-------RVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~t-------g~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
-.-+|+||+| .||.+ .+..+.++++.+ +. .|..|++ +|. +
T Consensus 43 ~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~----------Gw~----~--------------- 89 (236)
T 1tl2_A 43 FKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNG----------GWN----Q--------------- 89 (236)
T ss_dssp CSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECS----------CGG----G---------------
T ss_pred ceeEEECCCc-cEEEE--eCCeEEEECCCCCCccccccc-ccEeccc----------ccc----c---------------
Confidence 3468999976 69999 566799999766 33 3444432 122 0
Q ss_pred CCCCcceeEEcCCCeEEEEeCCCCEEEEEECCC
Q 013348 76 SLIFPWHLMKSEDDNLLIINRSFETLWIMDLAS 108 (444)
Q Consensus 76 ~Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~t 108 (444)
=..+.+|.+|.||+. .+.+|+|+++-+
T Consensus 90 ----F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 90 ----FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp ----CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ----ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 136788999999999 458999999754
No 186
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=89.80 E-value=11 Score=33.97 Aligned_cols=74 Identities=19% Similarity=0.156 Sum_probs=50.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++..|+.+. ..+.||..++.++.. .++.+.. .....
T Consensus 27 ~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~h~-----------------------------------~~v~~ 70 (312)
T 4ery_A 27 SSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKTISGHK-----------------------------------LGISD 70 (312)
T ss_dssp EEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCCS-----------------------------------SCEEE
T ss_pred EEEEECCCCCEEEEee-CCCeEEEEeCCCcccchhhccCC-----------------------------------CceEE
Confidence 4688888887666654 567788888876543 3332210 11246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+++.+++.++++-...+.|+.+|+.+++...
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 7788888888888888999999999887543
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.75 E-value=5.3 Score=42.07 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=46.3
Q ss_pred ceEEEecCCCEEEEEeC----CCCeEEEEECCCC--e-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCC
Q 013348 4 AASFYHKDDDCLYIVDS----ENHAIRRADMGRR--V-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQS 76 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADT----eNHaIRkIDl~tg--~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~ 76 (444)
.+++++++|..|++.-. .+..|+.+|+.++ . ..++.+....
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-------------------------------- 318 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-------------------------------- 318 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--------------------------------
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--------------------------------
Confidence 36788888876665432 3568888888766 4 4455432100
Q ss_pred CCCcceeEEcCCCeEEEEeC---CCCEEEEEECCCC--cEEEeec
Q 013348 77 LIFPWHLMKSEDDNLLIINR---SFETLWIMDLASG--EIKEAVK 116 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADa---gnh~IrkIDl~tG--~I~Tiag 116 (444)
..+|+ .-++ +.||+.-. .+.+|+++|+.++ ..+++..
T Consensus 319 ~~~~~--~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 319 QWDFV--DGVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp CEEEE--EEET-TEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred eEEEE--eccC-CEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 12222 2233 56766632 3778999999874 5666653
No 188
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.65 E-value=4.4 Score=43.04 Aligned_cols=80 Identities=11% Similarity=0.046 Sum_probs=52.0
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCC
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKEL 157 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gi 157 (444)
+....+..+.+|.|||+.. +-|.++|+.++.+ .+....... ++
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~----------------------------------~l 540 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVS----------------------------------NV 540 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSC----------------------------------GG
T ss_pred ceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCC----------------------------------CC
Confidence 4457888999999999987 5799999988877 443100000 01
Q ss_pred Cccccccccc-ccCCeEEEEeCCCCeEEEEeCCCCeEEEee
Q 013348 158 PYAGLISSSI-AFQNHILLCDIVGQRIMRLNRESGVCSNFQ 197 (444)
Q Consensus 158 p~a~~~Sgla-~~~~~LyIADT~nhRIRkvdl~tG~vST~~ 197 (444)
+. ..+.++. ..++.|||+-.. -|.++|.+++.+..+.
T Consensus 541 ~~-~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 541 TK-LFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYN 578 (795)
T ss_dssp GG-SCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEEC
T ss_pred CC-CeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeC
Confidence 10 0122333 346789998654 6899999998887764
No 189
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=89.59 E-value=10 Score=34.24 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=25.6
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
+.+.+.+++.++++-...++|+.+|+.++...
T Consensus 111 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 111 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE
Confidence 45667777888888888899999999988654
No 190
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.52 E-value=7 Score=36.90 Aligned_cols=32 Identities=13% Similarity=0.210 Sum_probs=25.8
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..++++++|.++++-...++|+.+|+.++...
T Consensus 180 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 180 YSVDWSRDGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEECCCCCEEEEEecCCcEEEEeCCCCcee
Confidence 57778877877777778899999999988654
No 191
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.39 E-value=2.9 Score=40.49 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=52.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..|+|+|.+..|.++=+.++.||.-|+.++... ++...|.. + . + .+
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~---------------~-----~----------V---~~ 169 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG---------------G-----S----------I---TG 169 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS---------------C-----C----------C---CE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC---------------C-----C----------E---EE
Confidence 468898865555555566788888887655322 22222211 0 0 1 36
Q ss_pred eEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 83 LMKSE-DDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 83 L~~d~-dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
|++.+ +++++++=...+.|+.||+.++.+.++..
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec
Confidence 67764 57788888888999999999888877764
No 192
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.38 E-value=8.7 Score=36.42 Aligned_cols=76 Identities=11% Similarity=-0.012 Sum_probs=46.5
Q ss_pred ceEEEecCCCEEEEEeC--CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 4 AASFYHKDDDCLYIVDS--ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADT--eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
..+++++++..|+++-. .++.|+..|+.++........+ ....
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-----------------------------------~~v~ 307 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-----------------------------------SQVT 307 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-----------------------------------SCEE
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-----------------------------------CcEE
Confidence 45677766655665533 5677777777655332211110 1135
Q ss_pred eeEEcCCCeEEEE--eCCCCEEEEEECCCCcEEEe
Q 013348 82 HLMKSEDDNLLII--NRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 82 gL~~d~dG~LYIA--Dagnh~IrkIDl~tG~I~Ti 114 (444)
.++++++|..+++ -...++|+.+|+.++.....
T Consensus 308 ~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 308 SLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp EEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred EEEECCCCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 6777777776666 34688999999888765544
No 193
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=89.32 E-value=13 Score=33.99 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=52.0
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
-.+++|+|++..|..+. ..+.||.-|+.++. +.++.+.... -.
T Consensus 16 V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~~~~~~~~~~~~~~-----------------------------------v~ 59 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTL-YSGRVELWNYETQVEVRSIQVTETP-----------------------------------VR 59 (304)
T ss_dssp EEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSC-----------------------------------EE
T ss_pred eEEEEECCCCCEEEEEc-CCCcEEEEECCCCceeEEeeccCCc-----------------------------------EE
Confidence 35799999997666554 67899999998774 3444332110 12
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
.+.+.++++++++-...++|+.+|+.+|+..
T Consensus 60 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 4556666777788788899999999998754
No 194
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=89.29 E-value=3 Score=40.41 Aligned_cols=71 Identities=14% Similarity=0.039 Sum_probs=49.1
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe----EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV----LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~----VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
...+++++.+..++++.+.++.||..|+.++. +.++.+. -.
T Consensus 234 v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-----------------------------------~~ 278 (430)
T 2xyi_A 234 VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH-----------------------------------TA 278 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC-----------------------------------SS
T ss_pred EeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC-----------------------------------CC
Confidence 35688887666788888888889999887541 1111100 12
Q ss_pred CcceeEEcCCCe-EEEEeCCCCEEEEEECCC
Q 013348 79 FPWHLMKSEDDN-LLIINRSFETLWIMDLAS 108 (444)
Q Consensus 79 ~P~gL~~d~dG~-LYIADagnh~IrkIDl~t 108 (444)
.+..|++.+++. +|++-...+.|+.+|+.+
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 256788888764 788888889999999986
No 195
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.28 E-value=14 Score=34.34 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=23.3
Q ss_pred cceeEEcCCCe-EEEEeCCCCEEEEEECCC
Q 013348 80 PWHLMKSEDDN-LLIINRSFETLWIMDLAS 108 (444)
Q Consensus 80 P~gL~~d~dG~-LYIADagnh~IrkIDl~t 108 (444)
...+++.+++. ++++-...+.|+.+|+.+
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 35677888776 777777888999999987
No 196
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=89.24 E-value=1.5 Score=44.90 Aligned_cols=81 Identities=10% Similarity=0.097 Sum_probs=52.8
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 2 RPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 2 ~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
.|..++|.++|..||. +....|+..|+.+|....+...... . -...+
T Consensus 18 ~~~~~~~spdg~~~~~--~~dg~i~~~d~~~g~~~~~~~~~~~--------------------~-----------~~~v~ 64 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR--EQKGTVRLWNVETNTSTVLIEGKKI--------------------E-----------SLRAI 64 (723)
T ss_dssp CCCCCCBSSSSCBCCC--CSSSCEEEBCGGGCCCEEEECTTTT--------------------T-----------TTTCS
T ss_pred cccccEEcCCCcEEEE--eCCCCEEEEECCCCcEEEEeccccc--------------------c-----------ccccc
Confidence 3677889999975544 4567899999888765544422100 0 01346
Q ss_pred eeEEcCCCe-EEEEeC--------CCCEEEEEECCCCcEEEee
Q 013348 82 HLMKSEDDN-LLIINR--------SFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG~-LYIADa--------gnh~IrkIDl~tG~I~Tia 115 (444)
.+++++||. |+.+.. ...+||.+|+.+|+.+.+.
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 788888876 433321 1378999999999876665
No 197
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.96 E-value=12 Score=38.44 Aligned_cols=30 Identities=3% Similarity=-0.036 Sum_probs=23.1
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
.+.+++.++|..+++-...+.|+.+|+.++
T Consensus 100 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred EEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 467788888776666667789999998876
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=88.60 E-value=2.9 Score=43.66 Aligned_cols=80 Identities=19% Similarity=0.138 Sum_probs=48.6
Q ss_pred ceEEEecCCCEEEEEeC------------CCCeEEEEECCCCeE--EEec-cCCCcCccCCcchhhhhcccCcccccCcc
Q 013348 4 AASFYHKDDDCLYIVDS------------ENHAIRRADMGRRVL--ETVY-PTSGISKKNNSLWAWIMEKLGFERDNDTK 68 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADT------------eNHaIRkIDl~tg~V--tTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a~~~ 68 (444)
.+++|+++|..||.+.. .++.|++.++.++.. ..+. +.+..
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~------------------------ 226 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP------------------------ 226 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT------------------------
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC------------------------
Confidence 57899999987877754 256799988876641 1221 11100
Q ss_pred ccCCCCCCCCCcceeEEcCCCe-EEE-E-eC-CCCEEEEEECCCCcEEEeec
Q 013348 69 SEKLDPQSLIFPWHLMKSEDDN-LLI-I-NR-SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 69 ~~~~~~~~Ln~P~gL~~d~dG~-LYI-A-Da-gnh~IrkIDl~tG~I~Tiag 116 (444)
..-+++.+++||. |++ + +. ++.+||.+|..+|..+.+..
T Consensus 227 ---------~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 227 ---------TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp ---------TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred ---------EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 0113556677765 332 2 22 35699999887888877764
No 199
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.57 E-value=2.2 Score=38.48 Aligned_cols=77 Identities=8% Similarity=-0.027 Sum_probs=53.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe----EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV----LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLI 78 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~----VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln 78 (444)
-.++++++++..|+++. .++.|+..++.++. +..+.+.. .
T Consensus 14 v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~-----------------------------------~ 57 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYK-----------------------------------H 57 (342)
T ss_dssp EEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECS-----------------------------------S
T ss_pred EEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeeecC-----------------------------------C
Confidence 35789999987777765 56889999887664 43333211 1
Q ss_pred CcceeEEcCCCe-EEEEeCCCCEEEEEEC-CCCcEEEee
Q 013348 79 FPWHLMKSEDDN-LLIINRSFETLWIMDL-ASGEIKEAV 115 (444)
Q Consensus 79 ~P~gL~~d~dG~-LYIADagnh~IrkIDl-~tG~I~Tia 115 (444)
....+++.+++. ++++-...++|+.+|+ .++...++.
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 134677777777 6666667889999999 988886654
No 200
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=88.55 E-value=13 Score=33.28 Aligned_cols=72 Identities=8% Similarity=0.013 Sum_probs=44.7
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
..++++++++.|+.+. .++.||..|+.++.+..+.+.. ...+.+
T Consensus 90 ~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~-----------------------------------~~v~~~ 133 (368)
T 3mmy_A 90 LDVCWSDDGSKVFTAS-CDKTAKMWDLSSNQAIQIAQHD-----------------------------------APVKTI 133 (368)
T ss_dssp EEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEECS-----------------------------------SCEEEE
T ss_pred EEEEECcCCCEEEEEc-CCCcEEEEEcCCCCceeecccc-----------------------------------CceEEE
Confidence 3566666665555443 3566777776666554433221 112456
Q ss_pred EE--cCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 84 MK--SEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 84 ~~--d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
.+ .+++.++++-...+.|+.+|+.+++.
T Consensus 134 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 134 HWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred EEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 66 66777777777788999999888763
No 201
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.50 E-value=2.2 Score=40.56 Aligned_cols=32 Identities=6% Similarity=0.185 Sum_probs=24.2
Q ss_pred CcceeEEcCC-CeEEEEeCCCCEEEEEECCCCc
Q 013348 79 FPWHLMKSED-DNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 79 ~P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~ 110 (444)
.+..|++.++ +.++++-...+.|+.+|+.++.
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 3567888765 5666666678899999998875
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=88.08 E-value=7.6 Score=40.48 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=42.8
Q ss_pred eEEEecCCCEEEEEeC---CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 5 ASFYHKDDDCLYIVDS---ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 5 GIa~D~~g~~LYVADT---eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+++++++|..|+++-. .+..|+.++..++...++.+.... ..+|+
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~--------------------------------~~~~~ 278 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA--------------------------------KYEVH 278 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC--------------------------------CEEEE
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc--------------------------------eEEEE
Confidence 6778888876655432 345777776655555555432100 12222
Q ss_pred eeEEcCCCeEEEEeC---CCCEEEEEECCCCcE---EEee
Q 013348 82 HLMKSEDDNLLIINR---SFETLWIMDLASGEI---KEAV 115 (444)
Q Consensus 82 gL~~d~dG~LYIADa---gnh~IrkIDl~tG~I---~Tia 115 (444)
..+ |.||+.-. .+.+|+++|+.++.. +++.
T Consensus 279 ---~~~-g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 279 ---AWK-DRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp ---EET-TEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred ---ecC-CcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 122 33777543 578999999988762 5555
No 203
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=87.42 E-value=5 Score=38.01 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=48.8
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+..++++++++.++++=+.++.||..|+.++. +.++.|.. ..-.
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-----------------------------------~~v~ 273 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-----------------------------------QNIT 273 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-----------------------------------SCEE
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-----------------------------------eeEE
Confidence 45677877766566665667788888876542 33332221 1124
Q ss_pred eeEEcCCC-eEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 82 HLMKSEDD-NLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG-~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
.|++.+++ .++++=...++|+.+|+.+|++-...
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 66777665 44455556788999999998765444
No 204
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.41 E-value=15 Score=40.38 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=54.0
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
.++++++++..|..+. .++.|+..|+.++. +.++.|.. .....
T Consensus 619 ~~~~~s~~~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~h~-----------------------------------~~v~~ 662 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCG-ADKTLQVFKAETGEKLLDIKAHE-----------------------------------DEVLC 662 (1249)
T ss_dssp EEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCCS-----------------------------------SCEEE
T ss_pred EEEEECCCCCEEEEEe-CCCeEEEEECCCCCEEEEeccCC-----------------------------------CCEEE
Confidence 4689999998776664 66789999988764 44444321 11246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
++++++|.++++-...++|+.||+.+|+....
T Consensus 663 ~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 77888888777777889999999999875433
No 205
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.26 E-value=14 Score=37.97 Aligned_cols=75 Identities=9% Similarity=0.026 Sum_probs=52.9
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
..++++++++..|.++. .++.|+..|+.++. +.++.+... ...
T Consensus 16 v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~-----------------------------------~v~ 59 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTET-----------------------------------PVR 59 (814)
T ss_dssp EEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSS-----------------------------------CEE
T ss_pred eEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCC-----------------------------------cEE
Confidence 46899999998888776 57899999988774 344433210 124
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
.++++++|.++++=...+.|+.+|+.+|....
T Consensus 60 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 56677777666665668899999998886543
No 206
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.23 E-value=23 Score=36.79 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=28.2
Q ss_pred cccCCeEEEEeCCCCeEEEEeCCCCeEE-EeeeccccccCCceee
Q 013348 167 IAFQNHILLCDIVGQRIMRLNRESGVCS-NFQFSNFAILGLPYWF 210 (444)
Q Consensus 167 a~~~~~LyIADT~nhRIRkvdl~tG~vS-T~~fsg~g~lg~P~~l 210 (444)
...++.||++ +....|+.+|.+||.+. ++. .+.++.+.|..+
T Consensus 472 ~t~gg~v~~g-~~dg~l~a~D~~tG~~lw~~~-~~~~~~~~p~~~ 514 (571)
T 2ad6_A 472 YTKGGLVWYA-TLDGYLKALDNKDGKELWNFK-MPSGGIGSPMTY 514 (571)
T ss_dssp EETTTEEEEE-CTTSEEEEEETTTCCEEEEEE-CSSCCCSCCEEE
T ss_pred EECCCEEEEE-cCCCeEEEEECCCCCEEEEEe-CCCCcEeeeEEE
Confidence 3457788887 45689999999998874 333 233566666553
No 207
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=87.16 E-value=16 Score=33.99 Aligned_cols=32 Identities=13% Similarity=0.024 Sum_probs=26.8
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
...|++.++|.++++-...+.|+.+|+.++..
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 45788888888888888899999999988754
No 208
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.12 E-value=19 Score=33.43 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=27.8
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
...++++++|.++++-...+.|+.+|+.+|+...
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 3577888888888888888999999999987543
No 209
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=86.91 E-value=7.8 Score=36.48 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=51.8
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCe-----EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRV-----LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSL 77 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-----VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~L 77 (444)
...+++++++..++++=+..+.||..|+.++. +.++.+....... .. +. + ..
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~--~~-~------------------~~ 285 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNR--SF--FS-E------------------II 285 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----C--CH--HH-H------------------HT
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccc--cc--cc-c------------------cC
Confidence 45789999883345555567899999998776 3555544211000 00 00 0 01
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCC-Cc
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLAS-GE 110 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~t-G~ 110 (444)
..-..++++++|.++++-.. +.|+.||+.+ +.
T Consensus 286 ~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 286 SSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp TCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS
T ss_pred ceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc
Confidence 23467888888877666666 9999999986 54
No 210
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.72 E-value=4.6 Score=37.52 Aligned_cols=34 Identities=21% Similarity=0.106 Sum_probs=27.0
Q ss_pred CcceeEEcC-CCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 79 FPWHLMKSE-DDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 79 ~P~gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
....+++++ ++.++++-...++|+.+|+.+++..
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 356788877 6788888888899999999988643
No 211
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.28 E-value=7.7 Score=37.49 Aligned_cols=82 Identities=11% Similarity=0.072 Sum_probs=48.5
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEE-eccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLET-VYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtT-VAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
+..+++++++..++++=+.++.|+..|+.+..-.. ..|.+.. +..+. + + -..+.
T Consensus 131 v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~------~~~~~----~------------h---~~~v~ 185 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQP------DLRLR----G------------H---QKEGY 185 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCC------SEEEE----C------------C---SSCCC
T ss_pred EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCC------cEEec----C------------C---CCCeE
Confidence 56788888744566666777888888875420000 0000000 00000 0 0 12356
Q ss_pred eeEEcCCCe-EEEEeCCCCEEEEEECCCC
Q 013348 82 HLMKSEDDN-LLIINRSFETLWIMDLASG 109 (444)
Q Consensus 82 gL~~d~dG~-LYIADagnh~IrkIDl~tG 109 (444)
+|++++++. ++++-...++|+.+|+.++
T Consensus 186 ~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 214 (430)
T 2xyi_A 186 GLSWNPNLNGYLLSASDDHTICLWDINAT 214 (430)
T ss_dssp CEEECTTSTTEEEEECTTSCEEEEETTSC
T ss_pred EEEeCCCCCCeEEEEeCCCeEEEEeCCCC
Confidence 888888766 7888888899999999874
No 212
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=86.20 E-value=10 Score=39.53 Aligned_cols=31 Identities=6% Similarity=0.140 Sum_probs=21.7
Q ss_pred ceEEEecCCCEEEEEeCC---------------CCeEEEEECCCCe
Q 013348 4 AASFYHKDDDCLYIVDSE---------------NHAIRRADMGRRV 34 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTe---------------NHaIRkIDl~tg~ 34 (444)
.+++|+++|+.||++-.. .+.|++.++.++.
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 568999999878776432 3458888776553
No 213
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.99 E-value=16 Score=33.45 Aligned_cols=87 Identities=13% Similarity=0.008 Sum_probs=49.6
Q ss_pred cceEEEecCCC-EEEEEeCCCCeEEEEEC----CCCe-------EEEeccCCCcCccCCcchhhhhcccCcccccCcccc
Q 013348 3 PAASFYHKDDD-CLYIVDSENHAIRRADM----GRRV-------LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSE 70 (444)
Q Consensus 3 P~GIa~D~~g~-~LYVADTeNHaIRkIDl----~tg~-------VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~ 70 (444)
...+++++++. .|+++. .++.|+..++ .++. +.++...-.. .. ...+.
T Consensus 48 v~~~~~s~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~--------- 107 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGE-KNSVARLARIVETDQEGKKYWKLTIIAELRHPFAL---------SA-SSGKT--------- 107 (425)
T ss_dssp CSEEEECSSCTTEEEEEE-TBTEEEEEEEEEC------CEEEEEEEEEECCCCC---------C----------------
T ss_pred eEEEEECCCCCcEEEEec-CCceEEEEEEecccCCccccccccccccccccccc---------cc-cccCC---------
Confidence 35789999997 666664 5789999998 7665 2223221000 00 00000
Q ss_pred CCCCCCCCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 71 KLDPQSLIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 71 ~~~~~~Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
-.....++++++|.++++-..++.|+.+|.....+..+.
T Consensus 108 ------~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 146 (425)
T 1r5m_A 108 ------TNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLN 146 (425)
T ss_dssp ------CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEEC
T ss_pred ------CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeecc
Confidence 123467888888877777777889999995444444443
No 214
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=85.58 E-value=13 Score=35.14 Aligned_cols=93 Identities=14% Similarity=0.069 Sum_probs=52.1
Q ss_pred CCCeEEEEeCCCCEEEEEECCCCcEEEee-cCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccccc
Q 013348 87 EDDNLLIINRSFETLWIMDLASGEIKEAV-KGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLISS 165 (444)
Q Consensus 87 ~dG~LYIADagnh~IrkIDl~tG~I~Tia-gG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sg 165 (444)
.++.++++-...+.|+.||+.+|...... +....+.... + .+...+. ......|..+...+..
T Consensus 271 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~l-----~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 271 KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEH----------F-LPIEKGL-----EELNFCGIRSLNALST 334 (437)
T ss_dssp TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGG----------G-SCBCSSG-----GGCCCCCCCSGGGGCC
T ss_pred CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccce----------e-ccccccc-----ccceecccccCCceEE
Confidence 45677788888889999999988754433 3221111000 0 0000000 0001122223333455
Q ss_pred ccccCCeEEEEeCCCCeEEEEeCCCCeEEE
Q 013348 166 SIAFQNHILLCDIVGQRIMRLNRESGVCSN 195 (444)
Q Consensus 166 la~~~~~LyIADT~nhRIRkvdl~tG~vST 195 (444)
++-..+.++++=.....|+..|+.++....
T Consensus 335 l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 335 ISVSNDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEECCceEEEecCCCCeEEEEECCCcccce
Confidence 555566788888888999999999887543
No 215
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=85.55 E-value=26 Score=33.59 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=48.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..++++++++.|+.+ +..+.||..|+.++. +.++.|.. ..-..
T Consensus 196 ~~v~~~p~~~~l~s~-s~D~~i~~wd~~~~~~~~~~~~h~-----------------------------------~~v~~ 239 (410)
T 1vyh_C 196 SSVSIMPNGDHIVSA-SRDKTIKMWEVQTGYCVKTFTGHR-----------------------------------EWVRM 239 (410)
T ss_dssp EEEEECSSSSEEEEE-ETTSEEEEEETTTCCEEEEEECCS-----------------------------------SCEEE
T ss_pred EEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEEEeCCC-----------------------------------ccEEE
Confidence 456777776544433 456777777776653 33443221 01134
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
+.+.++|.++++-...+.|+.||+.++......
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 566777888888888999999999988765433
No 216
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=85.41 E-value=6.3 Score=41.40 Aligned_cols=81 Identities=14% Similarity=0.036 Sum_probs=49.3
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
..+++.++|..||. + ...|+..|+.+|...++.-.... +.+ -....++
T Consensus 20 ~~~~w~~dg~~~~~-~--~~~i~~~~~~~~~~~~~~~~~~~-------~~~----------------------~~~~~~~ 67 (740)
T 4a5s_A 20 YSLRWISDHEYLYK-Q--ENNILVFNAEYGNSSVFLENSTF-------DEF----------------------GHSINDY 67 (740)
T ss_dssp CCEEECSSSEEEEE-E--TTEEEEEETTTCCEEEEECTTTT-------TTC----------------------CSCCCEE
T ss_pred cccEECCCCcEEEE-c--CCcEEEEECCCCceEEEEechhh-------hhh----------------------cccccce
Confidence 46788888854444 4 67999999999876555322111 000 0012356
Q ss_pred EEcCCCe-EEEEeC--------CCCEEEEEECCCCcEEEeec
Q 013348 84 MKSEDDN-LLIINR--------SFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 84 ~~d~dG~-LYIADa--------gnh~IrkIDl~tG~I~Tiag 116 (444)
.+++||. |+++-. ++..+|.+|+.+|++..+..
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 7777776 333221 12578899999998877653
No 217
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.25 E-value=9.9 Score=34.82 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=28.0
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
.....++++++|.++++-...+.|+.+|+.++...
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred CceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 34578889988887777778889999999988653
No 218
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.17 E-value=21 Score=32.07 Aligned_cols=77 Identities=14% Similarity=0.064 Sum_probs=50.8
Q ss_pred ceEEEecCCC---EEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 4 AASFYHKDDD---CLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 4 ~GIa~D~~g~---~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
..+++++++. .++++=+.++.|+..|+.++. +.++.+.. ..
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------------------------------~~ 117 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG-----------------------------------NA 117 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC-----------------------------------SC
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC-----------------------------------Cc
Confidence 5678888732 344444567899999988664 33333221 11
Q ss_pred cceeEEcC-CCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 80 PWHLMKSE-DDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 80 P~gL~~d~-dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
...+++.+ ++.++++-...+.|+.+|+.+++.....
T Consensus 118 i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 118 INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 24667776 6777777777889999999988755443
No 219
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=85.08 E-value=9.8 Score=37.30 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=29.4
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
.....++++++|.++++-...+.|+.+|+.+++...
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT 524 (615)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CceEEEEECCCCCEEEEcCCCCeEEEeeCCCCccee
Confidence 346788999888888887788999999999887643
No 220
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=84.94 E-value=5.8 Score=41.60 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=44.5
Q ss_pred CCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCCeE
Q 013348 12 DDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDNL 91 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~L 91 (444)
++.|||+...++ |..+|+.+|.+. |.+.... .. ... . .--....++++.+ +.|
T Consensus 68 ~g~vyv~~~~~~-v~AlD~~tG~~~---------------W~~~~~~--~~-~~~---~----~~~~~~~g~a~~~-~~v 120 (582)
T 1flg_A 68 DGVIYVTASYSR-LFALDAKTGKRL---------------WTYNHRL--PD-DIR---P----CCDVVNRGAAIYG-DKV 120 (582)
T ss_dssp TTEEEEEETTTE-EEEEESSSCCEE---------------EEEECCC--CT-TCC---C----SSCSCCCCCEEET-TEE
T ss_pred CCEEEEEcCCCC-EEEEECCCCcEE---------------EEEcCCC--Cc-ccc---c----ccccCCCccEEEC-CEE
Confidence 458999988655 999998877552 3221000 00 000 0 0000113455655 799
Q ss_pred EEEeCCCCEEEEEECCCCcEEE
Q 013348 92 LIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 92 YIADagnh~IrkIDl~tG~I~T 113 (444)
|+.. ..++|..+|+.||++.-
T Consensus 121 ~~~t-~dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 121 FFGT-LDASVVALNKNTGKVVW 141 (582)
T ss_dssp EEEE-TTTEEEEEESSSCCEEE
T ss_pred EEEe-CCCEEEEEECCCCCEEe
Confidence 9986 46789999999998754
No 221
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.78 E-value=13 Score=34.41 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=26.9
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
...++++++|.++++=...+.|+.+|+.++..
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 35788888888888878899999999998864
No 222
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.53 E-value=17 Score=38.39 Aligned_cols=76 Identities=12% Similarity=-0.056 Sum_probs=45.1
Q ss_pred CCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCCCeE
Q 013348 12 DDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSEDDNL 91 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~dG~L 91 (444)
++.|||+.. ++.|..+|..+|.+-=-.-.+.. ...+..... -....++++++ +.|
T Consensus 66 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~------------~~~~~~~~~-----------~~~~~~~~~~~-~~v 120 (668)
T 1kv9_A 66 DGVIYTSMS-WSRVIAVDAASGKELWRYDPEVA------------KVKARTSCC-----------DAVNRGVALWG-DKV 120 (668)
T ss_dssp TTEEEEEEG-GGEEEEEETTTCCEEEEECCCCC------------GGGGGGCTT-----------CSCCCCCEEEB-TEE
T ss_pred CCEEEEECC-CCeEEEEECCCChhceEECCCCC------------ccccccccc-----------cCCccceEEEC-CEE
Confidence 558999976 46799999888765322211100 000000000 00124556665 799
Q ss_pred EEEeCCCCEEEEEECCCCcEEE
Q 013348 92 LIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 92 YIADagnh~IrkIDl~tG~I~T 113 (444)
|+.. ..++|..+|+.||++.-
T Consensus 121 ~v~~-~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 121 YVGT-LDGRLIALDAKTGKAIW 141 (668)
T ss_dssp EEEC-TTSEEEEEETTTCCEEE
T ss_pred EEEc-CCCEEEEEECCCCCEee
Confidence 9985 56899999999998753
No 223
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=84.36 E-value=11 Score=36.20 Aligned_cols=72 Identities=15% Similarity=0.051 Sum_probs=50.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++. ++++=+..+.||..|+.++. +.++.|-. ..-+.
T Consensus 112 ~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~-----------------------------------~~V~~ 155 (410)
T 1vyh_C 112 TRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHT-----------------------------------DSVQD 155 (410)
T ss_dssp EEEEECSSSS-EEEEEESSSCEEEEETTTCCCCEEECCCS-----------------------------------SCEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccC-----------------------------------CcEEE
Confidence 4678888875 55555567889999987663 33333221 11246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
|+++++|.++++-...++|+.||+.++..
T Consensus 156 v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 156 ISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp EEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 77888888888888899999999988764
No 224
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.08 E-value=25 Score=37.21 Aligned_cols=44 Identities=14% Similarity=0.196 Sum_probs=31.3
Q ss_pred ccccCCeEEEEeCCCCeEEEEeCCCCeEE-EeeeccccccCCceeee
Q 013348 166 SIAFQNHILLCDIVGQRIMRLNRESGVCS-NFQFSNFAILGLPYWFA 211 (444)
Q Consensus 166 la~~~~~LyIADT~nhRIRkvdl~tG~vS-T~~fsg~g~lg~P~~l~ 211 (444)
++..++.||+. +....++.+|.++|.+- .+.. +.++.+.|..+.
T Consensus 465 ~~t~gg~vf~g-~~dg~l~a~d~~tG~~l~~~~~-~~~~~~~p~~~~ 509 (668)
T 1kv9_A 465 LSTAGNLVFQG-TAAGQMHAYSADKGEALWQFEA-QSGIVAAPMTFE 509 (668)
T ss_dssp EEETTTEEEEE-CTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEE
T ss_pred eEeCCCEEEEE-CCcccchhhhhhcChhheEecC-CCCcccCceEEE
Confidence 34567788988 56789999999988864 4433 356777777663
No 225
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=83.89 E-value=16 Score=32.81 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=49.3
Q ss_pred ceEEEecC---CCEEEEEeCCCCeEEEEECCCC-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 4 AASFYHKD---DDCLYIVDSENHAIRRADMGRR-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 4 ~GIa~D~~---g~~LYVADTeNHaIRkIDl~tg-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
.+++++|. ++.+++|=..+..|+..|+.++ .+.++.+-... . . -..
T Consensus 22 ~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~-----------------~---~----------~~~ 71 (366)
T 3k26_A 22 FGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA-----------------D---A----------DEN 71 (366)
T ss_dssp EEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECS-----------------C---T----------TCC
T ss_pred EEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecccc-----------------C---C----------CCc
Confidence 57888863 4445555555569999998744 44444432100 0 0 112
Q ss_pred cceeEEcCC----CeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 80 PWHLMKSED----DNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 80 P~gL~~d~d----G~LYIADagnh~IrkIDl~tG~I~T 113 (444)
...+++..+ |.++++-...+.|+.+|+.+++...
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 109 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK 109 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee
Confidence 345666665 6677777788999999999887543
No 226
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.87 E-value=0.76 Score=47.43 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=26.4
Q ss_pred CCCcceeEEcCCCe--EEEEeCCCCEEEEEECC
Q 013348 77 LIFPWHLMKSEDDN--LLIINRSFETLWIMDLA 107 (444)
Q Consensus 77 Ln~P~gL~~d~dG~--LYIADagnh~IrkIDl~ 107 (444)
|..||+|++.++|. |||+++. .+||+++.+
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKE-GYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETT-TEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCC-ceEEEEeCC
Confidence 89999999999885 9999984 799999764
No 227
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.58 E-value=2.5 Score=43.58 Aligned_cols=29 Identities=10% Similarity=0.006 Sum_probs=25.3
Q ss_pred CCCcceeEEcCCCeEEEEeC-------CCCEEEEEE
Q 013348 77 LIFPWHLMKSEDDNLLIINR-------SFETLWIMD 105 (444)
Q Consensus 77 Ln~P~gL~~d~dG~LYIADa-------gnh~IrkID 105 (444)
...|.+|.+++||.|||+|. ...+||||-
T Consensus 335 ~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 335 SGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp CSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred cCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 45689999999999999997 578999997
No 228
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.54 E-value=25 Score=31.77 Aligned_cols=31 Identities=3% Similarity=0.033 Sum_probs=23.2
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
...+++.+++.++++-..++.|+.+|+.++.
T Consensus 99 v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 5678888877766666677888888877665
No 229
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.52 E-value=23 Score=32.98 Aligned_cols=96 Identities=9% Similarity=-0.053 Sum_probs=54.0
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++..|+.+. ..+.||..|+.++. +.++.+.... ...+........+... . ....-.....
T Consensus 185 ~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~-~-------~~~~~~~v~~ 252 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSAS-LDGTIRLWECGTGTTIHTFNRKENP---HDGVNSIALFVGTDRQ-L-------HEISTSKKNN 252 (420)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEEETTTTEEEEEECBTTBT---TCCEEEEEEEECCCSS-C-------GGGCCCCCCT
T ss_pred EEEEEcCCCCEEEEEc-CCCcEEEeECCCCceeEEeecCCCC---CCCccEEEEecCCcce-e-------eecccCcccc
Confidence 5788998887666554 56789999998775 4444432111 0111000000000000 0 0000123345
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
++++++|.++++-...+.|+.+|+.++..
T Consensus 253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGVITVHNVFSKEQ 281 (420)
T ss_dssp TCSSCTTEEEEEEETTSCEEEEETTTCCE
T ss_pred eEEcCCCCEEEEEcCCCeEEEEECCCCce
Confidence 66778888888888889999999988764
No 230
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=83.39 E-value=6.9 Score=38.79 Aligned_cols=85 Identities=6% Similarity=-0.125 Sum_probs=51.3
Q ss_pred cceEEEecCCCEEEE---EeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCC
Q 013348 3 PAASFYHKDDDCLYI---VDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIF 79 (444)
Q Consensus 3 P~GIa~D~~g~~LYV---ADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~ 79 (444)
+..++|+++|..|+| +-+..+.||..|+.++. .|.-.. .+ -+.... -..|- -..
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~----~~~~~~-~~--~~~~~~-~~~~h---------------~~~ 151 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFS----NEAKQQ-KR--PFAYHK-LLKDA---------------GGM 151 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHH----CTTCSS-CC--CSEEEE-CCCSG---------------GGS
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccc----cCCcCC-cc--eeeeee-ccCCC---------------CCc
Confidence 568899999988887 55677889999875431 010000 00 000000 00000 112
Q ss_pred cceeEEcCC-CeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSED-DNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~ 110 (444)
..+|++.++ +.++++-...++|+.||+.++.
T Consensus 152 V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred eEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 467888876 6788877889999999998884
No 231
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.01 E-value=31 Score=35.17 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=28.5
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..+.|+++++|.++++=...++|+.+|+.+|+..
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 3568899998888888888999999999988643
No 232
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=82.95 E-value=9.9 Score=35.34 Aligned_cols=33 Identities=12% Similarity=-0.037 Sum_probs=27.7
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
...++++++|.++++-...+.|+.+|..++...
T Consensus 273 v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 457888888999899889999999999887643
No 233
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.92 E-value=5.9 Score=37.60 Aligned_cols=32 Identities=22% Similarity=0.105 Sum_probs=25.2
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
...++++++|.++++-...+.|+.||+.+|+.
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 46788888888888888899999999988764
No 234
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.86 E-value=2.3 Score=45.82 Aligned_cols=62 Identities=18% Similarity=0.070 Sum_probs=46.3
Q ss_pred CCcceEEEecCCCEEEE-EeC-----------CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCcc
Q 013348 1 MRPAASFYHKDDDCLYI-VDS-----------ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTK 68 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYV-ADT-----------eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~ 68 (444)
+.|-+|++|++| .||| .|. .|+.|-+++..+|.+..++-. . .
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P---------------------~-- 529 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--P---------------------I-- 529 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--C---------------------T--
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--C---------------------C--
Confidence 368899999988 6999 786 366888888888888777621 1 0
Q ss_pred ccCCCCCCCCCcceeEEcCCC-eEEEEeC
Q 013348 69 SEKLDPQSLIFPWHLMKSEDD-NLLIINR 96 (444)
Q Consensus 69 ~~~~~~~~Ln~P~gL~~d~dG-~LYIADa 96 (444)
..+|.|+++++|+ .|||+-.
T Consensus 530 --------~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 530 --------GCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp --------TCEEEEEEECTTSSEEEEEEE
T ss_pred --------CccccCCEECCCCCEEEEEEe
Confidence 4557899998874 7999854
No 235
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=82.84 E-value=15 Score=32.34 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=24.4
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
...++++++|.| ++-...++|+.+|+.+++....
T Consensus 228 i~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 228 VYCIKLLPNGDI-VSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp EEEEEECTTSCE-EEEETTSEEEEECTTTCCEEEE
T ss_pred EEEEEEecCCCE-EEEecCCEEEEEECCCCceeEE
Confidence 356778877754 4555778999999998875433
No 236
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=82.80 E-value=4.7 Score=36.84 Aligned_cols=18 Identities=39% Similarity=0.612 Sum_probs=14.5
Q ss_pred CCEEEEEECCCCcE-EEee
Q 013348 98 FETLWIMDLASGEI-KEAV 115 (444)
Q Consensus 98 nh~IrkIDl~tG~I-~Tia 115 (444)
..+|+++|+.+|+. ..+.
T Consensus 151 ~~~l~~~d~~~~~~~~~l~ 169 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFE 169 (347)
T ss_dssp EEEEEEEETTTTEEEEEEE
T ss_pred cceEEEEECCCCeEEeeec
Confidence 46899999999987 6654
No 237
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=82.14 E-value=12 Score=40.35 Aligned_cols=74 Identities=9% Similarity=0.104 Sum_probs=53.5
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe--------EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCC
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV--------LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQ 75 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~--------VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~ 75 (444)
..++|+|+|..|+++. ..+.||.-|+.++. +.|+-+.... .
T Consensus 133 ~svafSPDG~~LAsgs-~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g------------h------------------ 181 (588)
T 2j04_A 133 HCFEWNPIESSIVVGN-EDGELQFFSIRKNSENTPEFYFESSIRLSDAG------------S------------------ 181 (588)
T ss_dssp EEEEECSSSSCEEEEE-TTSEEEEEECCCCTTTCCCCEEEEEEECSCTT------------C------------------
T ss_pred EEEEEcCCCCEEEEEc-CCCEEEEEECCCCccccccceeeeeeeccccc------------c------------------
Confidence 4689999998888884 57889999998873 5666322100 0
Q ss_pred CCCCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 76 SLIFPWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 76 ~Ln~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
...-.+|++.++| ++|-...+.|+.||++++.+
T Consensus 182 -~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 182 -KDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp -CCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS
T ss_pred -cccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc
Confidence 1122578888877 67778899999999988774
No 238
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=81.89 E-value=35 Score=32.19 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=29.1
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
-..|++.++|.++++-...++|+.||+.+|.....
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 35788888899999999999999999999865433
No 239
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=81.17 E-value=24 Score=37.39 Aligned_cols=77 Identities=12% Similarity=0.021 Sum_probs=44.7
Q ss_pred CCEEEEEeCCCCeEEEEEC-CCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEE--cCC
Q 013348 12 DDCLYIVDSENHAIRRADM-GRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMK--SED 88 (444)
Q Consensus 12 g~~LYVADTeNHaIRkIDl-~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~--d~d 88 (444)
++.||++...++.|..+|. .+|.+. |.+..... ...... . + . -....++++ .+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~l---------------W~~~~~~~-~~~~~~---~-~-~--~~~~~g~av~p~~- 117 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTIL---------------WQDKPKQN-PAARAV---A-C-C--DLVNRGLAYWPGD- 117 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEE---------------EEECCCCC-GGGGGG---C-S-S--CSCCCCCEEECCC-
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEE---------------EEECCCCC-cccccc---c-c-c--cccccceEEEecC-
Confidence 5689999875678999998 777543 32220000 000000 0 0 0 011235566 43
Q ss_pred Ce----EEEEeCCCCEEEEEECCCCcEEE
Q 013348 89 DN----LLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 89 G~----LYIADagnh~IrkIDl~tG~I~T 113 (444)
+. ||+.. ..+++..+|..||++.-
T Consensus 118 g~~~~rV~v~t-~dg~l~AlDa~TG~~~W 145 (599)
T 1w6s_A 118 GKTPALILKTQ-LDGNVAALNAETGETVW 145 (599)
T ss_dssp SSSCCEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred CcceeEEEEEc-CCCEEEEEECCCCCEEE
Confidence 66 88875 56799999999998753
No 240
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.12 E-value=11 Score=34.68 Aligned_cols=31 Identities=3% Similarity=0.048 Sum_probs=20.4
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
.+.+++.+++.++++-...+.|+.+|+.++.
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 3567777777766666678889999988775
No 241
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=81.01 E-value=5.4 Score=41.04 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=48.2
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
+.++++.++|. + ++-..++.|+.+|+.+|....+...... . . ...+.
T Consensus 18 ~~~~~~s~dg~-~-~~~~~d~~i~~~~~~~g~~~~~~~~~~~------------~--------~-----------~~~~~ 64 (719)
T 1z68_A 18 TFFPNWISGQE-Y-LHQSADNNIVLYNIETGQSYTILSNRTM------------K--------S-----------VNASN 64 (719)
T ss_dssp CCCCEESSSSE-E-EEECTTSCEEEEESSSCCEEEEECHHHH------------H--------T-----------TTCSE
T ss_pred CCccEECCCCe-E-EEEcCCCCEEEEEcCCCcEEEEEccccc------------c--------c-----------cceee
Confidence 34678888883 3 3333578999999998877665432100 0 0 01246
Q ss_pred eEEcCCCe-EEEEeC--------CCCEEEEEECCCCcE
Q 013348 83 LMKSEDDN-LLIINR--------SFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d~dG~-LYIADa--------gnh~IrkIDl~tG~I 111 (444)
+++++||. |+++.. ...+||.+|+.+|+.
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 77888876 433322 257999999999976
No 242
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=80.99 E-value=17 Score=33.28 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=45.0
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
...+++++.+..++++=+.++.|+..|+.++........... ...
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----------------------------------~~~ 146 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET-----------------------------------VYS 146 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC-----------------------------------EEE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc-----------------------------------eee
Confidence 356888884444555555678999999988765443322111 011
Q ss_pred eEEc---CCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 83 LMKS---EDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d---~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
+.+. .++.++++-...+.|+.+|+.++..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 147 HHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred eEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 2222 2345667667788899999987754
No 243
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=80.92 E-value=34 Score=31.84 Aligned_cols=32 Identities=19% Similarity=0.016 Sum_probs=25.7
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
...+++++++.++++=...++|+.+|+.+++.
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence 35778888888777777889999999988753
No 244
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=80.77 E-value=5.5 Score=41.90 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=26.5
Q ss_pred ceeEEcCCCe-E--EEE-eCCCCEEEEEECCCCcEEEeecCC
Q 013348 81 WHLMKSEDDN-L--LII-NRSFETLWIMDLASGEIKEAVKGF 118 (444)
Q Consensus 81 ~gL~~d~dG~-L--YIA-Dagnh~IrkIDl~tG~I~TiagG~ 118 (444)
..+++++||. | |.+ ..+...|+.+|+++|....+..|.
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~ 363 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT 363 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC
Confidence 3456777775 2 333 356789999999998888777543
No 245
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.58 E-value=39 Score=31.87 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=53.4
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++. ++++=+..+.||..|+.++.. .++.+.... . ...+.....
T Consensus 253 ~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~------------~----------------~~~~~~v~~ 303 (380)
T 3iz6_a 253 NSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDR------------N----------------DNELPIVTS 303 (380)
T ss_dssp CEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSS------------S----------------CCSSCSCSE
T ss_pred EEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccccc------------c----------------ccccCceEE
Confidence 4677887775 445556677888888877643 333222110 0 001333468
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
++++++|.++++-..++.|+.||..+++..
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 889999999999999999999999887654
No 246
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=79.94 E-value=13 Score=35.10 Aligned_cols=34 Identities=18% Similarity=0.001 Sum_probs=27.5
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
....+.++++|.++++-...++|+.||+.+|...
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRV 319 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceE
Confidence 3457788888888888888899999999888643
No 247
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.63 E-value=24 Score=31.86 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=45.7
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe---EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV---LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~---VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..+++++++..|..+. .++.|+..|+..+. +.++.+.. ..-
T Consensus 15 ~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~-----------------------------------~~v 58 (379)
T 3jrp_A 15 HDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHE-----------------------------------GPV 58 (379)
T ss_dssp EEEEECSSSSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCS-----------------------------------SCE
T ss_pred EEEEEcCCCCEEEEEE-CCCcEEEEecCCCcceeeeEecCCC-----------------------------------CcE
Confidence 5789999987666664 56789999876332 22232211 011
Q ss_pred ceeEEcCC--CeEEEEeCCCCEEEEEECCCCcE
Q 013348 81 WHLMKSED--DNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 81 ~gL~~d~d--G~LYIADagnh~IrkIDl~tG~I 111 (444)
+.|++..+ +.++++=...+.|+.||+.++..
T Consensus 59 ~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 59 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred EEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 35556533 56666666778899999988863
No 248
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=78.78 E-value=9.2 Score=36.38 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=50.4
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEec-cCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVY-PTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
..++++|+|..|..+ +..+.||..|+.++.. .++. |- . ..-+
T Consensus 273 ~~~~~Spdg~~lasg-s~D~~V~iwd~~~~~~~~~~~~gH--~---------------------------------~~V~ 316 (365)
T 4h5i_A 273 TSMDVDMKGELAVLA-SNDNSIALVKLKDLSMSKIFKQAH--S---------------------------------FAIT 316 (365)
T ss_dssp EEEEECTTSCEEEEE-ETTSCEEEEETTTTEEEEEETTSS--S---------------------------------SCEE
T ss_pred EeEEECCCCCceEEE-cCCCEEEEEECCCCcEEEEecCcc--c---------------------------------CCEE
Confidence 467889988755555 4567899999888753 3432 21 1 1135
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
.|++++||.++++=+.-++||.+|+.+.
T Consensus 317 ~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 317 EVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7889999999999999999999998543
No 249
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=78.73 E-value=40 Score=30.92 Aligned_cols=76 Identities=8% Similarity=0.008 Sum_probs=50.1
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 5 ASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
.+++++++..|+.+ +..+.||..|+.++.. .++.|.. ..-..+
T Consensus 70 ~~~~s~dg~~l~s~-s~D~~v~~wd~~~~~~~~~~~~h~-----------------------------------~~v~~~ 113 (319)
T 3frx_A 70 DCTLTADGAYALSA-SWDKTLRLWDVATGETYQRFVGHK-----------------------------------SDVMSV 113 (319)
T ss_dssp EEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCS-----------------------------------SCEEEE
T ss_pred EEEECCCCCEEEEE-eCCCEEEEEECCCCCeeEEEccCC-----------------------------------CcEEEE
Confidence 46777777544444 4567788888777643 3333221 112467
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
.+++++.++++-...+.|+.+|+....+.++.+
T Consensus 114 ~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 146 (319)
T 3frx_A 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLG 146 (319)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 777788888888889999999998766666653
No 250
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.71 E-value=9.7 Score=34.25 Aligned_cols=31 Identities=6% Similarity=0.147 Sum_probs=23.5
Q ss_pred EcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 85 KSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 85 ~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
+++++.++++-...+.|+.+|+.++......
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWET 206 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeec
Confidence 5566777777778899999999998865443
No 251
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=78.68 E-value=14 Score=34.19 Aligned_cols=36 Identities=14% Similarity=-0.051 Sum_probs=28.7
Q ss_pred CcceeEEcCC-CeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 79 FPWHLMKSED-DNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 79 ~P~gL~~d~d-G~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
....+++.++ +.++++-...+.|+.+|+.++.....
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 203 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIH 203 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceE
Confidence 4568888887 67888888899999999998865433
No 252
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=78.29 E-value=6.5 Score=40.22 Aligned_cols=79 Identities=6% Similarity=-0.075 Sum_probs=48.1
Q ss_pred cceEEEecCCCEEEEEeCC--------CCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCC
Q 013348 3 PAASFYHKDDDCLYIVDSE--------NHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDP 74 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTe--------NHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~ 74 (444)
...++++++|+.|.++-.. ...|+..|+.++....+......
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~------------------------------ 112 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS------------------------------ 112 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC------------------------------
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc------------------------------
Confidence 5679999999877776332 26788889888876555432100
Q ss_pred CCCCCcceeEEcCCCe-EEEEeCCCCEEEEEECCCCcEEEee
Q 013348 75 QSLIFPWHLMKSEDDN-LLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 75 ~~Ln~P~gL~~d~dG~-LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
-..+..+++++||. |..+.. ++||.+|+.+|+...+.
T Consensus 113 --~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 113 --NAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp --SCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEE
T ss_pred --cccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEe
Confidence 00123444556653 333322 57888888888766555
No 253
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=77.49 E-value=30 Score=36.20 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=21.6
Q ss_pred eeEEcCCCe-EEEEeC---CCCEEEEEECCCC--cEEEeec
Q 013348 82 HLMKSEDDN-LLIINR---SFETLWIMDLASG--EIKEAVK 116 (444)
Q Consensus 82 gL~~d~dG~-LYIADa---gnh~IrkIDl~tG--~I~Tiag 116 (444)
++.+++||. |+|+-. ..+.||.+|++++ ...++..
T Consensus 238 ~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 238 GATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp EEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred EEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 455677765 434322 2359999999876 5566653
No 254
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=77.48 E-value=30 Score=36.39 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=23.5
Q ss_pred ceeEEcCCCe-EE-EEeC---CCCEEEEEECCCC--c-EEEeec
Q 013348 81 WHLMKSEDDN-LL-IINR---SFETLWIMDLASG--E-IKEAVK 116 (444)
Q Consensus 81 ~gL~~d~dG~-LY-IADa---gnh~IrkIDl~tG--~-I~Tiag 116 (444)
.++.+++||. |+ .+.. .+..||.+|+.+| . ...+..
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 3566777774 33 3333 3679999999887 5 666653
No 255
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=77.27 E-value=11 Score=35.41 Aligned_cols=92 Identities=8% Similarity=0.060 Sum_probs=58.9
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCC-C-eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGR-R-VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~t-g-~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
...+++++++..|+.++. +.||..|+.+ + .+.++.+.... ...++.. +....+...
T Consensus 288 v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~---~~~l~~~-----------------~~~~~i~~~ 345 (447)
T 3dw8_B 288 ISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYL---RSKLCSL-----------------YENDCIFDK 345 (447)
T ss_dssp EEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGG---TTTHHHH-----------------HHTSGGGCC
T ss_pred EEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccccc---ccccccc-----------------ccccccccc
Confidence 357899999887777766 9999999874 3 33333332100 0000000 000113334
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeec
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tiag 116 (444)
..++++++|..+++=...+.|+.||+.++++.++.+
T Consensus 346 ~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 381 (447)
T 3dw8_B 346 FECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEA 381 (447)
T ss_dssp CCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEEC
T ss_pred eEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeee
Confidence 468899988888888899999999999998876653
No 256
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=77.00 E-value=68 Score=32.63 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=28.1
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
-+.|+++++|.++++=...+.|+.+|+.+|+..
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEe
Confidence 357888888999888889999999999888654
No 257
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=75.99 E-value=23 Score=36.48 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=27.2
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
-+.|+++++|.++++-...++|+.+|+.+|..
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 35788888889888888899999999998864
No 258
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=75.78 E-value=54 Score=30.88 Aligned_cols=69 Identities=12% Similarity=0.055 Sum_probs=46.4
Q ss_pred cCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEEcCC
Q 013348 10 KDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMKSED 88 (444)
Q Consensus 10 ~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~d~d 88 (444)
+++ .++++=+.++.||..|+.++. +.++.+... -.....++++++
T Consensus 180 ~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h---------------------------------~~~v~~~~~s~~ 225 (437)
T 3gre_A 180 EEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPR---------------------------------HGAVSSICIDEE 225 (437)
T ss_dssp SSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGG---------------------------------GCCEEEEEECTT
T ss_pred CCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCC---------------------------------CCceEEEEECCC
Confidence 445 455555667899999987764 344433210 112357778888
Q ss_pred CeEEEEeCCCCEEEEEECCCCcEE
Q 013348 89 DNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 89 G~LYIADagnh~IrkIDl~tG~I~ 112 (444)
+.++++-...+.|+.+|+.++...
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCeEEEEEcCCccEE
Confidence 888888788899999999988653
No 259
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=75.58 E-value=53 Score=30.74 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=27.7
Q ss_pred cceeEEcCCCeEEEEeCCCCE-EEEEECCCCcEE
Q 013348 80 PWHLMKSEDDNLLIINRSFET-LWIMDLASGEIK 112 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~-IrkIDl~tG~I~ 112 (444)
.+.|+++++|.++++-...++ |+.+|+.+|+..
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 468889999988888888887 999999988643
No 260
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=75.53 E-value=80 Score=32.75 Aligned_cols=29 Identities=7% Similarity=0.090 Sum_probs=21.2
Q ss_pred ceEEEecCCCEEEEEeC-C---CCeEEEEECCC
Q 013348 4 AASFYHKDDDCLYIVDS-E---NHAIRRADMGR 32 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADT-e---NHaIRkIDl~t 32 (444)
.+++++++|..|+++-. . +..|+.+|+.+
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 47889999987776532 1 57888888765
No 261
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=75.27 E-value=48 Score=30.06 Aligned_cols=29 Identities=3% Similarity=-0.008 Sum_probs=24.6
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
..|++.+++.++++-...++|+.+|+.++
T Consensus 101 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEECCCC
Confidence 57788888888888888999999998876
No 262
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=75.12 E-value=52 Score=31.29 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=49.1
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
...++|+|++..+.++=+.++.||..|+.++... +..+.... . ..|.+............ ....-..-.
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~--~--~~~~~s~~~~~~~~~~~------~~~~~~~v~ 258 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV--K--NPWLLTLNTLPLVNTCH------SSGIASSLA 258 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C--S--CCCSEEEESGGGC------------CCSSSCS
T ss_pred cEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc--c--cceEEecccccceeeee------cccccccce
Confidence 4578999988666666678899999999877432 22222111 0 00111100000000000 000122234
Q ss_pred eeEEc-CCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 82 HLMKS-EDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 82 gL~~d-~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
.+.+. .+|...++-...++|+.+|+.++..
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 55554 5688888889999999999987754
No 263
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.12 E-value=16 Score=33.68 Aligned_cols=71 Identities=3% Similarity=-0.039 Sum_probs=41.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeE---EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVL---ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V---tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++++.|+.+ +.++.||..|+.++.. .++.|. -..-
T Consensus 15 ~~~~~s~~g~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~h-----------------------------------~~~v 58 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTT-TATNQVELYEQDGNGWKHARTFSDH-----------------------------------DKIV 58 (377)
T ss_dssp SCCEECSSSSEEECC-CSSSCBCEEEEETTEEEECCCBCCC-----------------------------------SSCE
T ss_pred EEEEECCCCCEEEEe-cCCCEEEEEEccCCceEEEEEEecC-----------------------------------CceE
Confidence 467888888644444 4578888888766521 111111 1113
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
+.+++.++|.++++-...+.|+.+|+.++.
T Consensus 59 ~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 59 TCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp EEEEECTTTCCEEEEETTSSEEEC------
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 567788877777777778889999998876
No 264
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=74.96 E-value=8.2 Score=41.12 Aligned_cols=25 Identities=8% Similarity=-0.051 Sum_probs=20.0
Q ss_pred CCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 87 EDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 87 ~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..|.+|++ +..+.|+.+|..||++-
T Consensus 485 agglvf~g-t~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 485 AGNLVFEG-SADGRVIAYAADTGEKL 509 (689)
T ss_dssp TTTEEEEE-CTTSEEEEEETTTCCEE
T ss_pred CCCEEEEE-CCCCcEEEEECCCCccc
Confidence 34778887 57889999999999864
No 265
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=74.69 E-value=23 Score=33.33 Aligned_cols=71 Identities=13% Similarity=0.056 Sum_probs=50.0
Q ss_pred ceEEEecCCCEEEEEeCCCCe-EEEEECCCCe-EEEec-cCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHA-IRRADMGRRV-LETVY-PTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHa-IRkIDl~tg~-VtTVA-GtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++|..|..+.. .+. ||..|+.++. +.++. |.. . ..-
T Consensus 199 ~~~~~s~~g~~l~s~s~-d~~~v~iwd~~~~~~~~~~~~g~h-~---------------------------------~~v 243 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQ-DGTIIRVFKTEDGVLVREFRRGLD-R---------------------------------ADV 243 (355)
T ss_dssp EEEEECTTSSEEEEEET-TCSEEEEEETTTCCEEEEEECTTC-C---------------------------------SCE
T ss_pred EEEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCC-C---------------------------------CcE
Confidence 57899998875655554 555 9999998764 44443 211 0 112
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
+.++++++|.++++-...+.|+.+|+.++
T Consensus 244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 47788888888888888899999999765
No 266
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=74.69 E-value=59 Score=30.90 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..+++++++..+++-...+.|+.+|+.+|+..
T Consensus 314 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 314 YSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 46778888887788888899999999988654
No 267
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=74.28 E-value=44 Score=29.20 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=25.6
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
....+++.+++. +++-...+.|+.+|+.+++...
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh
Confidence 346777888777 5666678899999999886543
No 268
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=74.21 E-value=29 Score=33.41 Aligned_cols=106 Identities=11% Similarity=0.100 Sum_probs=58.5
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCC
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELP 158 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip 158 (444)
.-.+++++++|.||.. .+..++++++.++.-...++ ....+..+ .|. +
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~----------------Gw~-----------~-- 89 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNG----------------GWN-----------Q-- 89 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECS----------------CGG-----------G--
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEeccc----------------ccc-----------c--
Confidence 4459999999999999 66689999987633222222 11111000 121 1
Q ss_pred cccccccccccCCeEEEEeCCCCeEEEEeCCCCeEEEee-----eccccccCCceeeeeccceeeecc
Q 013348 159 YAGLISSSIAFQNHILLCDIVGQRIMRLNRESGVCSNFQ-----FSNFAILGLPYWFAFPLERVYAVA 221 (444)
Q Consensus 159 ~a~~~Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~~-----fsg~g~lg~P~~l~~PL~~v~~~~ 221 (444)
|. .-....++.||.. ++ .+|.|++.-+..-.+.- +.+.|=-.++.-|..|-.+.|+..
T Consensus 90 F~---a~~fD~~G~LYav-~d-G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 90 FQ---FLFFDPNGYLYAV-SK-DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CS---EEEECTTSCEEEE-ET-TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ce---EEEECCCCCEEEe-CC-CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 10 0123457889999 55 89999988442222220 111111223555666777777655
No 269
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.80 E-value=41 Score=35.71 Aligned_cols=125 Identities=12% Similarity=0.160 Sum_probs=69.2
Q ss_pred CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccccccc
Q 013348 88 DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLISSSI 167 (444)
Q Consensus 88 dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla 167 (444)
+|.||++.. .++|+.+|+.||++.--........ .. . ...+....++++
T Consensus 70 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~--------------------~~--~--------~~~~~~~~~~~~ 118 (689)
T 1yiq_A 70 DGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRH--------------------RA--G--------EACCDAVNRGVA 118 (689)
T ss_dssp TTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGG--------------------GG--G--------GCTTCSCCCCCE
T ss_pred CCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCcc--------------------cc--c--------cccccCCCCccE
Confidence 379999875 5679999999998754432110000 00 0 000000012344
Q ss_pred ccCCeEEEEeCCCCeEEEEeCCCCeEE-Eeeec-c----ccccCCceeeeeccceeeecccccCCcccceeeeeecCCCe
Q 013348 168 AFQNHILLCDIVGQRIMRLNRESGVCS-NFQFS-N----FAILGLPYWFAFPLERVYAVAGGHQGSWTDHIQRCSLLPGR 241 (444)
Q Consensus 168 ~~~~~LyIADT~nhRIRkvdl~tG~vS-T~~fs-g----~g~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~v~~~pGr 241 (444)
..++.||+.. ...+|..+|.+||.+- ++... + ..+.+.|... -+.+|-...........+|.-+|..+|+
T Consensus 119 ~~~g~v~v~~-~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 119 VWKGKVYVGV-LDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV---NGKVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp EETTEEEEEC-TTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred EECCEEEEEc-cCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE---CCEEEEEeCCCccCCCCEEEEEECCCCc
Confidence 5678888885 4678999999999864 33322 1 1223333322 2334332211111245689999999998
Q ss_pred eeEEEe
Q 013348 242 IDIKVN 247 (444)
Q Consensus 242 i~i~v~ 247 (444)
+.=+..
T Consensus 195 ~~W~~~ 200 (689)
T 1yiq_A 195 EAWRFY 200 (689)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 876655
No 270
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=72.47 E-value=24 Score=38.66 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=28.2
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
..++++++|..+++-...+.|+.+|+.+|....+.
T Consensus 1007 ~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~ 1041 (1249)
T 3sfz_A 1007 RHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ 1041 (1249)
T ss_dssp CCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe
Confidence 46778888888888888999999999998765443
No 271
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.24 E-value=7.1 Score=41.87 Aligned_cols=34 Identities=9% Similarity=-0.011 Sum_probs=27.7
Q ss_pred CCCCcceeEEcC-CCeEEEEeCCC---------------------CEEEEEECCCC
Q 013348 76 SLIFPWHLMKSE-DDNLLIINRSF---------------------ETLWIMDLASG 109 (444)
Q Consensus 76 ~Ln~P~gL~~d~-dG~LYIADagn---------------------h~IrkIDl~tG 109 (444)
.|.-|-++.++. +|.+|+|.++| .+||+++++.+
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~ 437 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRD 437 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGG
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCC
Confidence 499999999985 58999999965 47999987543
No 272
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.09 E-value=56 Score=29.38 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=24.4
Q ss_pred cceeEEcCC--CeEEEEeCCCCEEEEEECCCC
Q 013348 80 PWHLMKSED--DNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 80 P~gL~~d~d--G~LYIADagnh~IrkIDl~tG 109 (444)
.+.+++.++ +.++++-...+.|+.+|+.++
T Consensus 104 v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 104 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred eEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 467778877 777777788899999999877
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=72.05 E-value=82 Score=33.26 Aligned_cols=127 Identities=14% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCeEEEEeCCCCEEEEEEC-CCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcc-ccccc
Q 013348 88 DDNLLIINRSFETLWIMDL-ASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYA-GLISS 165 (444)
Q Consensus 88 dG~LYIADagnh~IrkIDl-~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a-~~~Sg 165 (444)
+|.||++....+.|..+|+ .||++.--..-..... . . ..++. ....+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~------~---~----------------------~~~~~~~~~~g 110 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPA------A---R----------------------AVACCDLVNRG 110 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGG------G---G----------------------GGCSSCSCCCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcc------c---c----------------------ccccccccccc
Confidence 3799999875778999999 8998754332100000 0 0 00000 00112
Q ss_pred ccc--cCCe----EEEEeCCCCeEEEEeCCCCeEE-Eeeeccc----cccCCceeeeeccceeeecccccCCcccceeee
Q 013348 166 SIA--FQNH----ILLCDIVGQRIMRLNRESGVCS-NFQFSNF----AILGLPYWFAFPLERVYAVAGGHQGSWTDHIQR 234 (444)
Q Consensus 166 la~--~~~~----LyIADT~nhRIRkvdl~tG~vS-T~~fsg~----g~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~ 234 (444)
++. .++. ||+.. ...++..+|.+||.+- .+...+. .+.+.|.-.. +.+|-.+..-......+|.-
T Consensus 111 ~av~p~~g~~~~rV~v~t-~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~---g~V~vg~~g~e~g~~g~v~A 186 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQ-LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVK---DKVIIGSSGAELGVRGYLTA 186 (599)
T ss_dssp CEEECCCSSSCCEEEEEC-TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET---TEEEECCBCGGGTCCCEEEE
T ss_pred eEEEecCCcceeEEEEEc-CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEEC---CEEEEEecccccCCCCeEEE
Confidence 233 3445 88874 4679999999999874 2222221 2333333221 33332221101113568999
Q ss_pred eecCCCeeeEEEeee
Q 013348 235 CSLLPGRIDIKVNVD 249 (444)
Q Consensus 235 v~~~pGri~i~v~v~ 249 (444)
+|..+|+..=+....
T Consensus 187 ~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 187 YDVKTGEQVWRAYAT 201 (599)
T ss_dssp EETTTCCEEEEEESS
T ss_pred EECCCCcEEEEEcCC
Confidence 999999887666544
No 274
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=71.22 E-value=89 Score=34.14 Aligned_cols=72 Identities=11% Similarity=0.103 Sum_probs=48.1
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
...++|++++..|.++ +.++.||..+..++......+. . ..-+.
T Consensus 20 V~~lafspdg~~lAsg-s~Dg~I~lw~~~~~~~~~~~~~--~---------------------------------~~V~~ 63 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIA-TVTGEVHIYGQQQVEVVIKLED--R---------------------------------SAIKE 63 (902)
T ss_dssp EEEEEEETTTTEEEEE-ETTSEEEEECSTTCEEEEECSS--C---------------------------------CCEEE
T ss_pred cEEEEECCCCCEEEEE-eCCCEEEEEeCCCcEEEEEcCC--C---------------------------------CCEEE
Confidence 4678999999755555 4568899998766544322110 0 00146
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
|++.+ |.++++=...+.|+.||+.+|+.
T Consensus 64 l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred EEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 77777 67556666789999999998864
No 275
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=70.71 E-value=1.1e+02 Score=32.99 Aligned_cols=75 Identities=9% Similarity=0.065 Sum_probs=49.6
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
-.+++|+|+|..|-++ +.++.|+..|. .+.+.++. .. .. .. =..-..
T Consensus 88 V~~vawSPdG~~LAs~-s~dg~V~iwd~-~~~l~~l~-~~-~~---------------~~--------------~~sv~s 134 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVL-SNNGNVSVFKD-NKMLTNLD-SK-GN---------------LS--------------SRTYHC 134 (588)
T ss_dssp EEEEEECSSSSCEEEE-ETTSCEEEEET-TEEEEECC-CS-SC---------------ST--------------TTCEEE
T ss_pred EEEEEECCCCCEEEEE-eCCCcEEEEeC-Cceeeecc-CC-Cc---------------cc--------------cccEEE
Confidence 3578999998655555 45677888884 44555554 11 10 00 001247
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
|++++||.+..+-...++|+.+|+.+|.
T Consensus 135 vafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 135 FEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp EEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 8889998766666778999999999885
No 276
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=69.43 E-value=13 Score=33.17 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.1
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
+.|+++++|.++++=...+.|+.||+.||.
T Consensus 310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 578888888888887788899999998884
No 277
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=68.61 E-value=33 Score=30.23 Aligned_cols=28 Identities=21% Similarity=0.089 Sum_probs=22.9
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLAS 108 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~t 108 (444)
+.|+++++|.++++=...++|+.||+.+
T Consensus 288 ~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 288 LSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 4678888888888878889999999864
No 278
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=68.16 E-value=20 Score=36.77 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=23.9
Q ss_pred eeEEcCCCe-EEEE---eCCCCEEEEEECCCCcEEEeec
Q 013348 82 HLMKSEDDN-LLII---NRSFETLWIMDLASGEIKEAVK 116 (444)
Q Consensus 82 gL~~d~dG~-LYIA---Dagnh~IrkIDl~tG~I~Tiag 116 (444)
.+++++||. ||++ ..+..+||.+|+.++....+..
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~ 354 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITS 354 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSC
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCceEeccc
Confidence 445666765 4442 3456789999999888776654
No 279
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.12 E-value=9.3 Score=41.56 Aligned_cols=86 Identities=8% Similarity=-0.055 Sum_probs=57.7
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 1 MRPAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 1 ~~P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
.+|+|+-++|+|..+|++.-....+-.+|... .-.-+++. |..+. ....+. +..=..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k-~~~~~~~k---------~~~~~-----~~~~ae-------~e~GlGP 380 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK-LPDLFAGK---------LADPR-----DVIVGE-------PELGLGP 380 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGG-HHHHHTTC---------CSCGG-----GGEEEC-------CBCCSCE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh-hhhhhhcc---------ccCcc-----cceEee-------ccCCCcc
Confidence 47999999999999999999888888887531 00001110 00000 000000 1112359
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLAS 108 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~t 108 (444)
++.++|++|+.|.+-.-..||-||+++.
T Consensus 381 lHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 381 LHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred cEEEECCCCceEeeeeecceEEEEeccH
Confidence 9999999999999999999999999864
No 280
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.65 E-value=67 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.064 Sum_probs=26.8
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
..|+++++|.++++-...++|+.+|+.++....
T Consensus 219 ~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 219 NTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEeccCceee
Confidence 567888888888887888999999999876543
No 281
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=67.36 E-value=21 Score=32.05 Aligned_cols=34 Identities=12% Similarity=-0.083 Sum_probs=27.1
Q ss_pred CcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 79 FPWHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 79 ~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
....+++++++.++++-...+.|+.||+.+++..
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 4567888888877677777889999999988743
No 282
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=67.14 E-value=36 Score=32.26 Aligned_cols=72 Identities=14% Similarity=0.034 Sum_probs=49.6
Q ss_pred ceEEEecCCCEEEEEeC-CCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDS-ENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADT-eNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..++|+|+|..|.+|=. ....||..|+.++......+.. . .-++
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-~----------------------------------~V~~ 181 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-G----------------------------------EVKD 181 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-S----------------------------------CCCE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-C----------------------------------ceEE
Confidence 46899999998888855 4688999999887654332211 0 0247
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
|+++++|.++++-. .+.+++++..+|..
T Consensus 182 v~fspdg~~l~s~s-~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 182 LHFSTDGKVVAYIT-GSSLEVISTVTGSC 209 (365)
T ss_dssp EEECTTSSEEEEEC-SSCEEEEETTTCCE
T ss_pred EEEccCCceEEecc-ceeEEEEEeccCcc
Confidence 88888887665554 55677888777764
No 283
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=67.14 E-value=87 Score=29.69 Aligned_cols=28 Identities=18% Similarity=0.037 Sum_probs=19.6
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
.+.++ +..+++-...+.|+.+|+.++..
T Consensus 357 ~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 357 LLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 45554 35566666788999999988764
No 284
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=66.01 E-value=16 Score=33.68 Aligned_cols=30 Identities=10% Similarity=0.157 Sum_probs=21.3
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
...|++.++|.++++-.. +.|+.+|+.++.
T Consensus 217 v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~ 246 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVECD-QTVVCFDLRKDV 246 (343)
T ss_dssp EEEEEECTTSSEEEEEES-SBEEEEETTSST
T ss_pred EEEEEEeCCCCEEEEEeC-CeEEEEEcCCCC
Confidence 357788887765555443 499999998764
No 285
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=65.74 E-value=1.3e+02 Score=30.98 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=27.4
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
..|+++++|.++++=...+.|+.+|+.+|...
T Consensus 434 ~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 57888888898888889999999999998654
No 286
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=64.78 E-value=29 Score=36.77 Aligned_cols=83 Identities=10% Similarity=0.121 Sum_probs=47.7
Q ss_pred eEEEecCCCEEEEEeCCC------------------CeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccC
Q 013348 5 ASFYHKDDDCLYIVDSEN------------------HAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDND 66 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeN------------------HaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~ 66 (444)
++++|++++.||+.-... ..|..+|..+|.+.=-.-+... ..|.|.
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~-----d~wd~~----------- 310 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG-----DNWDYT----------- 310 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT-----CCSCCC-----------
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC-----cccccc-----------
Confidence 578999998899874321 2599999988876544333211 122111
Q ss_pred ccccCCCCCCCCCcceeEEcCCC---eEEEEeCCCCEEEEEECCCCcEE
Q 013348 67 TKSEKLDPQSLIFPWHLMKSEDD---NLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 67 ~~~~~~~~~~Ln~P~gL~~d~dG---~LYIADagnh~IrkIDl~tG~I~ 112 (444)
....|.-+....+| .+++.-..++.++.+|..||++.
T Consensus 311 ---------~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 311 ---------STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp ---------CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ---------cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 02333333222234 44445556778888888888753
No 287
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=64.11 E-value=68 Score=29.72 Aligned_cols=74 Identities=12% Similarity=-0.069 Sum_probs=47.8
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEE--EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLE--TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW 81 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt--TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~ 81 (444)
..++|+++|..|..+ +..+.||.-|+.++... ...-.|.. ..-.
T Consensus 20 ~~l~~sp~g~~las~-~~D~~i~iw~~~~~~~~~~~~~~~~h~---------------------------------~~v~ 65 (345)
T 3fm0_A 20 WFLAWNPAGTLLASC-GGDRRIRIWGTEGDSWICKSVLSEGHQ---------------------------------RTVR 65 (345)
T ss_dssp EEEEECTTSSCEEEE-ETTSCEEEEEEETTEEEEEEEECSSCS---------------------------------SCEE
T ss_pred EEEEECCCCCEEEEE-cCCCeEEEEEcCCCcceeeeeeccccC---------------------------------CcEE
Confidence 368999998755544 56788999987766422 11111111 1124
Q ss_pred eeEEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 82 HLMKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 82 gL~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
.|+++++|.++++=...+.|+.+|..++..
T Consensus 66 ~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 66 KVAWSPCGNYLASASFDATTCIWKKNQDDF 95 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECCC-E
T ss_pred EEEECCCCCEEEEEECCCcEEEEEccCCCe
Confidence 677888888777777788888888877653
No 288
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.03 E-value=75 Score=27.85 Aligned_cols=73 Identities=7% Similarity=0.012 Sum_probs=51.3
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 5 ASFYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
-|+|++++ .|-++ ..+.||.-|+.+|.+ .++.+.+.. ..=..|
T Consensus 30 ~l~WS~~~-~lAvg--~D~tV~iWd~~tg~~~~~~~~~~~~---------------------------------~~V~~v 73 (318)
T 4ggc_A 30 LVDWSSGN-VLAVA--LDNSVYLWSASSGDILQLLQMEQPG---------------------------------EYISSV 73 (318)
T ss_dssp CEEECTTS-EEEEE--ETTEEEEEETTTCCEEEEEECCSTT---------------------------------CCEEEE
T ss_pred EEEECCCC-EEEEE--eCCEEEEEECCCCCEEEEEEecCCC---------------------------------CeEEEE
Confidence 47887654 66665 367899999998864 455443211 001467
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
++.++|.++++=...+.|+.+|+.+|+...
T Consensus 74 ~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 74 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 788888888888889999999999987543
No 289
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=61.86 E-value=13 Score=35.90 Aligned_cols=67 Identities=9% Similarity=0.164 Sum_probs=34.8
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 5 ASFYHKDDDCLYIVDSENHAIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 5 GIa~D~~g~~LYVADTeNHaIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
+.++ +++.||++.. ++.|+.+|..+|.+. ++.. +.. +..|.
T Consensus 4 sP~v--~~~~v~~gs~-dg~v~a~d~~tG~~~W~~~~-~~~--------------------------------~s~p~-- 45 (369)
T 2hz6_A 4 TVTL--PETLLFVSTL-DGSLHAVSKRTGSIKWTLKE-DPV--------------------------------LQVPT-- 45 (369)
T ss_dssp ------CTTEEEEEET-TSEEEEEETTTCCEEEEEEC-CCS--------------------------------CCCC---
T ss_pred CCee--eCCEEEEEcC-CCEEEEEECCCCCEEEEecC-CCc--------------------------------eecce--
Confidence 3455 4668999864 578999998877553 2211 100 22221
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcE
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEI 111 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I 111 (444)
+ .+|.+|++.+..+.|+.+|+.+|+.
T Consensus 46 -~-~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 46 -H-VEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp ------CCEEECTTTCCEEEC-----CC
T ss_pred -E-cCCCEEEEeCCCCEEEEEECCCCce
Confidence 1 2366888877888888888888865
No 290
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=60.69 E-value=93 Score=32.78 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=47.3
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe---EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV---LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~---VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++++.|+.+. .++.|+..|+.++. +.++.|.. ..-
T Consensus 13 ~~l~~s~dg~~latg~-~dg~I~vwd~~~~~~~~~~~l~~h~-----------------------------------~~V 56 (753)
T 3jro_A 13 HDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHE-----------------------------------GPV 56 (753)
T ss_dssp EEECCCSSSCCEEEEE-TTTEEEEEEEETTEEEEEEEECCCS-----------------------------------SCE
T ss_pred EEEEECCCCCeEEEEE-CCCcEEEEecCCCCCccceeccCCc-----------------------------------Cce
Confidence 4678888887666664 57889999876432 22222210 012
Q ss_pred ceeEEcCC--CeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSED--DNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~d--G~LYIADagnh~IrkIDl~tG~I~ 112 (444)
+.+++..+ ++++++-...+.|+.+|+.++...
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 45666554 777777778889999999888643
No 291
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=60.31 E-value=1.1e+02 Score=28.35 Aligned_cols=31 Identities=13% Similarity=0.261 Sum_probs=25.4
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
-..|++.++|.++++-...+.|+.+|+.++.
T Consensus 108 v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred ceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 3678888888888888888999999987763
No 292
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=58.49 E-value=1e+02 Score=27.66 Aligned_cols=71 Identities=11% Similarity=0.128 Sum_probs=45.6
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCC---eEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRR---VLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg---~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++|..|..+ +.++.||..|+.++ .+.++.|-... -
T Consensus 13 ~~~~~s~~g~~las~-s~D~~v~iw~~~~~~~~~~~~l~gH~~~-----------------------------------V 56 (297)
T 2pm7_B 13 HDAVMDYYGKRMATC-SSDKTIKIFEVEGETHKLIDTLTGHEGP-----------------------------------V 56 (297)
T ss_dssp EEEEECTTSSEEEEE-ETTSCEEEEEBCSSCBCCCEEECCCSSC-----------------------------------E
T ss_pred EEEEECCCCCEEEEE-eCCCEEEEEecCCCCcEEEEEEccccCC-----------------------------------e
Confidence 368899988755544 56788999987532 23444332100 1
Q ss_pred ceeEEcC--CCeEEEEeCCCCEEEEEECCCCc
Q 013348 81 WHLMKSE--DDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 81 ~gL~~d~--dG~LYIADagnh~IrkIDl~tG~ 110 (444)
+.|++.. +|.++++=...++|+.+|+.+|.
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 3455532 36777777788999999998774
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=56.67 E-value=84 Score=28.66 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=46.5
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe---EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCc
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV---LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFP 80 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~---VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P 80 (444)
..++++++|+.|.. =+..+.||..|+.++. +.++.|-... -
T Consensus 17 ~~v~~s~~g~~las-gs~D~~v~lwd~~~~~~~~~~~l~gH~~~-----------------------------------V 60 (316)
T 3bg1_A 17 HDAQMDYYGTRLAT-CSSDRSVKIFDVRNGGQILIADLRGHEGP-----------------------------------V 60 (316)
T ss_dssp EEEEECGGGCEEEE-EETTTEEEEEEEETTEEEEEEEEECCSSC-----------------------------------E
T ss_pred EEeeEcCCCCEEEE-EeCCCeEEEEEecCCCcEEEEEEcCCCcc-----------------------------------E
Confidence 46889988865544 4577899999987763 3344332100 1
Q ss_pred ceeEEcC--CCeEEEEeCCCCEEEEEECCCCc
Q 013348 81 WHLMKSE--DDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 81 ~gL~~d~--dG~LYIADagnh~IrkIDl~tG~ 110 (444)
+.|++.. ++.++++=...++|+.+|+.+|.
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 3455532 36677777788899999998874
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=56.54 E-value=65 Score=33.61 Aligned_cols=69 Identities=17% Similarity=0.119 Sum_probs=37.6
Q ss_pred CCeEEEEeCCCCeEE-EeeeccccccCCceeeeeccceeeecccccCCcccceeeeeecCCCeeeEEEeeeCCCCccccc
Q 013348 180 GQRIMRLNRESGVCS-NFQFSNFAILGLPYWFAFPLERVYAVAGGHQGSWTDHIQRCSLLPGRIDIKVNVDIPSDTELVE 258 (444)
Q Consensus 180 nhRIRkvdl~tG~vS-T~~fsg~g~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~v~~~pGri~i~v~v~~P~~~el~~ 258 (444)
...|..+|++||.+. ++.. +.|.+ ..|+ +...+..+.|+...+|+-+|..+|++.=+.. +|.++ .+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~------~~~~~-~g~~--~tagglvf~g~~dg~l~A~D~~tG~~lW~~~--~~~g~-~a~ 532 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE------HLPLW-AGVL--ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ--TGSGI-VSP 532 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE------SSCCC-SCCE--EETTTEEEEECTTSEEEEEETTTCCEEEEEE--CSSCC-CSC
T ss_pred cceEEEEECCCCCEEEEecC------CCCCc-ccce--EeCCCEEEEECCCCcEEEEECCCCCEEEEec--CCCCc-ccC
Confidence 467888888888753 2221 11211 1121 1223333456677788888988888775543 45544 234
Q ss_pred cc
Q 013348 259 SL 260 (444)
Q Consensus 259 p~ 260 (444)
|+
T Consensus 533 P~ 534 (582)
T 1flg_A 533 PI 534 (582)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 295
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=55.90 E-value=17 Score=34.96 Aligned_cols=106 Identities=18% Similarity=0.154 Sum_probs=51.2
Q ss_pred CCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccccccc
Q 013348 88 DDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLISSSI 167 (444)
Q Consensus 88 dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~Sgla 167 (444)
++.||++. ..+.|+.+|+.+|++..-... ..+. ..| +
T Consensus 9 ~~~v~~gs-~dg~v~a~d~~tG~~~W~~~~-~~~~---------------------------------s~p--------~ 45 (369)
T 2hz6_A 9 ETLLFVST-LDGSLHAVSKRTGSIKWTLKE-DPVL---------------------------------QVP--------T 45 (369)
T ss_dssp TTEEEEEE-TTSEEEEEETTTCCEEEEEEC-CCSC---------------------------------CCC---------
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEecC-CCce---------------------------------ecc--------e
Confidence 37899886 457899999999987533321 1100 011 1
Q ss_pred ccCCeEEEEeCCCCeEEEEeCCCCeEE-Eeeecccc-ccCCceeeeeccceeeecccccCCcccceeeeeecCCCeeeE
Q 013348 168 AFQNHILLCDIVGQRIMRLNRESGVCS-NFQFSNFA-ILGLPYWFAFPLERVYAVAGGHQGSWTDHIQRCSLLPGRIDI 244 (444)
Q Consensus 168 ~~~~~LyIADT~nhRIRkvdl~tG~vS-T~~fsg~g-~lg~P~~l~~PL~~v~~~~~~~~g~~~~~i~~v~~~pGri~i 244 (444)
..++.+|++.+..+.|+.+|.++|... .+.+..-. ....|.. ...+..+.++...++.-+|..+|++.=
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~--------~~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCR--------SSDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------------CCCCEEEEEEEEECCC------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceE--------ecCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 234568888888889999999888652 33221111 1111211 122334466667778888888887643
No 296
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=55.16 E-value=1.3e+02 Score=27.92 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=46.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++++++..|+.+ +..+.||..|+.++. +.++.|.... ...
T Consensus 158 ~~~~~~~~~~~l~t~-s~D~~v~lwd~~~~~~~~~~~~h~~~-----------------------------------v~~ 201 (354)
T 2pbi_B 158 SACSFTNSDMQILTA-SGDGTCALWDVESGQLLQSFHGHGAD-----------------------------------VLC 201 (354)
T ss_dssp EEEEECSSSSEEEEE-ETTSEEEEEETTTCCEEEEEECCSSC-----------------------------------EEE
T ss_pred EEEEEeCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEcCCCCC-----------------------------------eEE
Confidence 457777777655544 457889999987764 4455443211 012
Q ss_pred eEEc--CCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 83 LMKS--EDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 83 L~~d--~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+.+. .+|+++++-...++|+.||+.+|....
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 2332 346777777788899999999887543
No 297
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=54.53 E-value=48 Score=28.96 Aligned_cols=31 Identities=10% Similarity=-0.070 Sum_probs=25.2
Q ss_pred cceeEEcCC--CeEEEEeCCCCEEEEEECCCCc
Q 013348 80 PWHLMKSED--DNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 80 P~gL~~d~d--G~LYIADagnh~IrkIDl~tG~ 110 (444)
.+.+++.++ +.++++-...+.|+.+|+.++.
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 467888887 7877777788999999998775
No 298
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=54.27 E-value=44 Score=33.57 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=51.5
Q ss_pred CEEEEEeCCCC--eEEEEECCCCeEE-EeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcc-eeEEcCC
Q 013348 13 DCLYIVDSENH--AIRRADMGRRVLE-TVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPW-HLMKSED 88 (444)
Q Consensus 13 ~~LYVADTeNH--aIRkIDl~tg~Vt-TVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~-gL~~d~d 88 (444)
..||.-+...| .|-.+|+.++.+. .+.= .+.|+-. +..|+ ++-+.+.
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~----------------ekEGPNg-------------i~~~~~~~~i~~~ 90 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPL----------------HKTGPNG-------------LPAVFGSRPSPDS 90 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEEC----------------BSSSTTB-------------CTTCCCEEESSST
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeecc----------------ccCCCCC-------------cccceeeEEecCC
Confidence 58999999988 9999999999765 4431 1122211 44465 4656667
Q ss_pred CeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 89 DNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 89 G~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
+.|||.+...+.|..+|...-++..+
T Consensus 91 DsI~i~~~~~~~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 91 QYILVAQNNISRLSSINSQGEIIRNY 116 (369)
T ss_dssp TSEEEEEGGGTEEEEECTTCCEEEEE
T ss_pred CEEEEEeCCcceEEEECCCceEEEEE
Confidence 89999999999999999864444444
No 299
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=53.81 E-value=1.3e+02 Score=31.91 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=16.4
Q ss_pred CeEEEE-e---CCCCEEEEEECCC-CcEEE
Q 013348 89 DNLLII-N---RSFETLWIMDLAS-GEIKE 113 (444)
Q Consensus 89 G~LYIA-D---agnh~IrkIDl~t-G~I~T 113 (444)
+.||+. + +++.+|+++|+.+ +..++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 566654 4 3578999999876 34333
No 300
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=52.75 E-value=89 Score=32.93 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=24.4
Q ss_pred cceeEEcCC--CeEEEEeCCCCEEEEEECCCC
Q 013348 80 PWHLMKSED--DNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 80 P~gL~~d~d--G~LYIADagnh~IrkIDl~tG 109 (444)
...+++.++ +.++++-...+.|+.+|+.++
T Consensus 102 V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred eEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 457778777 777777788899999999877
No 301
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=52.72 E-value=27 Score=34.46 Aligned_cols=73 Identities=8% Similarity=-0.075 Sum_probs=48.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..+++|++++..++++=+.++.||..|+.++... +.-.+. -.....
T Consensus 152 V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~~~---------------------------------~~~v~~ 197 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATLPS---------------------------------TVAVTS 197 (434)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEECG---------------------------------GGCEEE
T ss_pred eEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eeccCC---------------------------------CCceeE
Confidence 4678999884456665667899999998877321 110000 012457
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCCc
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASGE 110 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG~ 110 (444)
++++++|..+++=...++|+.||+. |.
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 8888887766666678899999987 54
No 302
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=51.09 E-value=83 Score=29.88 Aligned_cols=29 Identities=21% Similarity=0.036 Sum_probs=23.7
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
++|+++++|.++++=...++||.||+.+.
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 57888888888888888899999997643
No 303
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=50.75 E-value=1.7e+02 Score=27.71 Aligned_cols=72 Identities=7% Similarity=-0.003 Sum_probs=50.3
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEECCCCeEEE-eccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeE
Q 013348 6 SFYHKDDDCLYIVDSENHAIRRADMGRRVLET-VYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLM 84 (444)
Q Consensus 6 Ia~D~~g~~LYVADTeNHaIRkIDl~tg~VtT-VAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~ 84 (444)
|+|++. +.|-|+- .+.||.-|..+|.+.- +-+.+.. ..=..|+
T Consensus 111 l~wS~~-n~lAvgl--d~tV~lWd~~tg~~~~~~~~~~~~---------------------------------~~V~sv~ 154 (420)
T 4gga_A 111 VDWSSG-NVLAVAL--DNSVYLWSASSGDILQLLQMEQPG---------------------------------EYISSVA 154 (420)
T ss_dssp EEECTT-SEEEEEE--TTEEEEEETTTCCEEEEEECCSTT---------------------------------CCEEEEE
T ss_pred EEECCC-CEEEEEe--CCEEEEEECCCCCEEEEEEecCCC---------------------------------CcEEEEE
Confidence 677644 5777764 5789999998886543 3332211 0114778
Q ss_pred EcCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 85 KSEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 85 ~d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
++++|.++++=...+.|+.||+.+++...
T Consensus 155 fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 155 WIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 88888888888889999999999987543
No 304
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=49.63 E-value=1.8e+02 Score=27.64 Aligned_cols=69 Identities=19% Similarity=0.222 Sum_probs=42.1
Q ss_pred EEecCCCEEEEEeCCCCeEEEEECCCCeE-EEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcceeEE
Q 013348 7 FYHKDDDCLYIVDSENHAIRRADMGRRVL-ETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHLMK 85 (444)
Q Consensus 7 a~D~~g~~LYVADTeNHaIRkIDl~tg~V-tTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL~~ 85 (444)
++..+++.|+ +=+.++.||..|+.++.. .++.|... .-+.+.+
T Consensus 138 ~~~~d~~~l~-~g~~dg~i~iwd~~~~~~~~~~~~h~~-----------------------------------~v~~l~~ 181 (435)
T 1p22_A 138 CLQYDDQKIV-SGLRDNTIKIWDKNTLECKRILTGHTG-----------------------------------SVLCLQY 181 (435)
T ss_dssp EEECCSSEEE-EEESSSCEEEEESSSCCEEEEECCCSS-----------------------------------CEEEEEC
T ss_pred EEEECCCEEE-EEeCCCeEEEEeCCCCeEEEEEcCCCC-----------------------------------cEEEEEE
Confidence 3444665444 445678899999877643 33332210 0123444
Q ss_pred cCCCeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 86 SEDDNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 86 d~dG~LYIADagnh~IrkIDl~tG~I~T 113 (444)
++.++++-...+.|+.+|+.+|+...
T Consensus 182 --~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 182 --DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp --CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred --CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 35666777788899999999887543
No 305
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=49.11 E-value=1.6e+02 Score=26.98 Aligned_cols=32 Identities=6% Similarity=0.056 Sum_probs=24.0
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCCcEE
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASGEIK 112 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~ 112 (444)
+.|+++++|..+++=...++|+.+|+......
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKF 153 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCcee
Confidence 46778888877777777889999998744443
No 306
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=45.60 E-value=2.5e+02 Score=28.19 Aligned_cols=28 Identities=7% Similarity=-0.091 Sum_probs=22.2
Q ss_pred EEEEEeCCCCeEEEEECCCCe-EEEeccC
Q 013348 14 CLYIVDSENHAIRRADMGRRV-LETVYPT 41 (444)
Q Consensus 14 ~LYVADTeNHaIRkIDl~tg~-VtTVAGt 41 (444)
.+++.-+....||.-|+.+|. +.|+.|.
T Consensus 194 ~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 467777889999999999884 7888653
No 307
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=43.03 E-value=1.2e+02 Score=27.71 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=23.6
Q ss_pred ceeEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 81 WHLMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 81 ~gL~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
..|++.+++.++++=...++|+.+|..++
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 56778888888888888899999987766
No 308
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=41.40 E-value=2.1e+02 Score=26.05 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=19.4
Q ss_pred CeEEEEeCCCCEEEEEECCCCcEEE
Q 013348 89 DNLLIINRSFETLWIMDLASGEIKE 113 (444)
Q Consensus 89 G~LYIADagnh~IrkIDl~tG~I~T 113 (444)
+.++++-...+.|+.+|+.++.+..
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~ 190 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEA 190 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhhe
Confidence 5567777788899999998876543
No 309
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=36.87 E-value=2e+02 Score=30.63 Aligned_cols=28 Identities=29% Similarity=0.437 Sum_probs=18.3
Q ss_pred eeEEcCCCe-EEEEe--CCCCEEEEEECCCC
Q 013348 82 HLMKSEDDN-LLIIN--RSFETLWIMDLASG 109 (444)
Q Consensus 82 gL~~d~dG~-LYIAD--agnh~IrkIDl~tG 109 (444)
++.+++||. |++.- ..+..||.+|+.++
T Consensus 275 ~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 275 FMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 456777764 44332 24678999999875
No 310
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=35.52 E-value=15 Score=30.35 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=20.0
Q ss_pred ecCCCeeeEEEeeeCCCCccccc
Q 013348 236 SLLPGRIDIKVNVDIPSDTELVE 258 (444)
Q Consensus 236 ~~~pGri~i~v~v~~P~~~el~~ 258 (444)
.+.+|+-++.|.|.+|.|++|++
T Consensus 51 g~~~G~~~~~V~v~~P~G~~lv~ 73 (90)
T 3lyw_A 51 GSEPGEHDYEVKVEPIPNIKIVE 73 (90)
T ss_dssp TCCSEEEEEECEECCCTTEEEEE
T ss_pred CCCCCcEeEEEEEECCCCCEEEE
Confidence 45689999999999999999975
No 311
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=34.53 E-value=62 Score=33.17 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=46.9
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCe-EEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCcce
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRV-LETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWH 82 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~-VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~g 82 (444)
..++|+|++.. +++=.+.+.||..|+.++. +.++.|-. ..-+.
T Consensus 359 ~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~-----------------------------------~~V~s 402 (524)
T 2j04_B 359 VPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRE-----------------------------------TTITA 402 (524)
T ss_dssp CCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEECS-----------------------------------SCEEE
T ss_pred cceEeCCCcCe-EEEeCCCCcEEEEECcccccceeeecCC-----------------------------------CceEE
Confidence 46888888764 5555566788888887654 24554421 11246
Q ss_pred eEEcCCCeEEEEeCCCCEEEEEECCCC
Q 013348 83 LMKSEDDNLLIINRSFETLWIMDLASG 109 (444)
Q Consensus 83 L~~d~dG~LYIADagnh~IrkIDl~tG 109 (444)
|+++++|.++++=...++|+.+|+..+
T Consensus 403 va~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 403 IGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEeCCCCCeEEEEECCCEEEEEechHh
Confidence 677777777777778888998887654
No 312
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.13 E-value=1e+02 Score=32.37 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=26.2
Q ss_pred CCcceeEEcCCCeEEEEeCCCCEEEEEECCCCcEEEe
Q 013348 78 IFPWHLMKSEDDNLLIINRSFETLWIMDLASGEIKEA 114 (444)
Q Consensus 78 n~P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I~Ti 114 (444)
+...++..+ +|+|||+- ++-|.++|+.++.+..+
T Consensus 559 ~~i~~i~~~-~g~lWi~t--~~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 559 NEILSMTCV-KNSIWVST--TNGLWIIDRKTMDARQQ 592 (758)
T ss_dssp CCEEEEEEE-TTEEEEEE--SSCEEEEETTTCCEEEC
T ss_pred cceEEEEEC-CCCEEEEC--CCCeEEEcCCCceeEEe
Confidence 345667665 69999997 45699999999988764
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=34.02 E-value=2.2e+02 Score=28.01 Aligned_cols=83 Identities=13% Similarity=0.120 Sum_probs=53.0
Q ss_pred CCeEEEEe-CCCCeEEEEeCCCCeEEEeeecccc-ccCCceeeee-cc----ceeeecccccCCcccceeeeeecCCCee
Q 013348 170 QNHILLCD-IVGQRIMRLNRESGVCSNFQFSNFA-ILGLPYWFAF-PL----ERVYAVAGGHQGSWTDHIQRCSLLPGRI 242 (444)
Q Consensus 170 ~~~LyIAD-T~nhRIRkvdl~tG~vST~~fsg~g-~lg~P~~l~~-PL----~~v~~~~~~~~g~~~~~i~~v~~~pGri 242 (444)
++.+||.+ +.+.+|..++.++|... ..+.--. ....|+.+.. |. +.+...+.-+.|+++.++-.+++.+|++
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEE-eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 56788888 68899999999888543 3322212 1223444321 10 0011444556899999999999999999
Q ss_pred eEEEeeeCCCC
Q 013348 243 DIKVNVDIPSD 253 (444)
Q Consensus 243 ~i~v~v~~P~~ 253 (444)
.=+..+..|.+
T Consensus 134 ~W~~~~~~~~~ 144 (339)
T 2be1_A 134 ISAFGPGSKNG 144 (339)
T ss_dssp EEEESTTCBCC
T ss_pred EEEEecCCCcc
Confidence 98887777654
No 314
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=33.65 E-value=2.8e+02 Score=25.31 Aligned_cols=19 Identities=5% Similarity=-0.227 Sum_probs=13.7
Q ss_pred eEEEEeCCCCEEEEEECCC
Q 013348 90 NLLIINRSFETLWIMDLAS 108 (444)
Q Consensus 90 ~LYIADagnh~IrkIDl~t 108 (444)
.++++-...++|+.+|...
T Consensus 185 ~~l~s~~~d~~i~iwd~~~ 203 (343)
T 2xzm_R 185 PYFASVGWDGRLKVWNTNF 203 (343)
T ss_dssp CEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCEEEEEcCCC
Confidence 5666666788899998543
No 315
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=33.61 E-value=5e+02 Score=28.23 Aligned_cols=79 Identities=8% Similarity=-0.039 Sum_probs=49.8
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
..|+++++| .|-++. .++.||..|+.++.+-.- ++- . .|. .|. -...+.|
T Consensus 579 ~svafSpdG-~lAsgs-~D~tv~lwd~~~~~~~~~-~~~-~--------~~~---~gh---------------~~~V~sv 628 (902)
T 2oaj_A 579 SAINNSNIG-FVGIAY-AAGSLMLIDRRGPAIIYM-ENI-R--------EIS---GAQ---------------SACVTCI 628 (902)
T ss_dssp EEEEECBTS-EEEEEE-TTSEEEEEETTTTEEEEE-EEG-G--------GTC---SSC---------------CCCEEEE
T ss_pred EEEEecCCc-EEEEEe-CCCcEEEEECCCCeEEEE-eeh-h--------Hhc---ccc---------------ccceEEE
Confidence 578999998 555554 578999999887765321 110 0 000 000 1225677
Q ss_pred EEc-----CCC---eEEEEeCCCCEEEEEEC---CCCcEE
Q 013348 84 MKS-----EDD---NLLIINRSFETLWIMDL---ASGEIK 112 (444)
Q Consensus 84 ~~d-----~dG---~LYIADagnh~IrkIDl---~tG~I~ 112 (444)
+++ +|| ...++=+..+.|+.||+ .+|...
T Consensus 629 ~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 629 EFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp EEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred EEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 887 765 66666777889999998 677643
No 316
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=33.55 E-value=4e+02 Score=27.44 Aligned_cols=34 Identities=6% Similarity=0.059 Sum_probs=23.7
Q ss_pred eeEEcCCCeEEEEeC-CCCEEEEEECCCCcEEEee
Q 013348 82 HLMKSEDDNLLIINR-SFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 82 gL~~d~dG~LYIADa-gnh~IrkIDl~tG~I~Tia 115 (444)
++++..+|.|||.=- ....++++|+.++.-+.+.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECC
Confidence 355555689999854 2347999999988665543
No 317
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=30.84 E-value=94 Score=31.27 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=26.0
Q ss_pred cCCCeEEEEeCCCCEEEEEECCCCc-EEEeec
Q 013348 86 SEDDNLLIINRSFETLWIMDLASGE-IKEAVK 116 (444)
Q Consensus 86 d~dG~LYIADagnh~IrkIDl~tG~-I~Tiag 116 (444)
++++.++++-+..++||.+|+.||+ +.++.+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 3467899999999999999999997 577764
No 318
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=30.80 E-value=3.1e+02 Score=24.97 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=23.2
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECC
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLA 107 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~ 107 (444)
-+.|+++++|.++++=...+.|+.+|+.
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 3578888888888888888999999984
No 319
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=29.53 E-value=1.7e+02 Score=27.80 Aligned_cols=30 Identities=23% Similarity=0.172 Sum_probs=22.6
Q ss_pred cCCCeEEEEeCCCCEEEEEECCCCcEEEee
Q 013348 86 SEDDNLLIINRSFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 86 d~dG~LYIADagnh~IrkIDl~tG~I~Tia 115 (444)
..+|..+++-...+.|+.+|+.+++.....
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~ 169 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECKRIL 169 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEEEEE
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeEEEEE
Confidence 335677777778899999999998765444
No 320
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=29.45 E-value=2.5e+02 Score=26.51 Aligned_cols=28 Identities=18% Similarity=0.087 Sum_probs=21.1
Q ss_pred CCeEEEEeCCCCEEEEEECCCCc-EEEee
Q 013348 88 DDNLLIINRSFETLWIMDLASGE-IKEAV 115 (444)
Q Consensus 88 dG~LYIADagnh~IrkIDl~tG~-I~Tia 115 (444)
+|.++++=...++||.||+.++. +.++.
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~ 183 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGY 183 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeec
Confidence 57888888889999999987653 44443
No 321
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=27.92 E-value=2.9e+02 Score=27.60 Aligned_cols=77 Identities=19% Similarity=0.235 Sum_probs=51.5
Q ss_pred eEEEEeCCCC--EEEEEECCCCcEE-EeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCcccccc-c
Q 013348 90 NLLIINRSFE--TLWIMDLASGEIK-EAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLIS-S 165 (444)
Q Consensus 90 ~LYIADagnh--~IrkIDl~tG~I~-TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~S-g 165 (444)
-||.-+...| .|-.+|+.++++. .+- .++ .++.|++. ++ +
T Consensus 41 yL~~~N~~~~~~~i~~iDL~~~kl~k~i~--~ek-------------------------------EGPNgi~~---~~~~ 84 (369)
T 3s9j_A 41 YLHFENTQKSLYDIVIFDIENQQIAKRIP--LHK-------------------------------TGPNGLPA---VFGS 84 (369)
T ss_dssp EEEEEECSTTCCEEEEEETTTTEEEEEEE--CBS-------------------------------SSTTBCTT---CCCE
T ss_pred EEEEeCCCCCcCcEEEEECCCCceeeeec--ccc-------------------------------CCCCCccc---ceee
Confidence 4777787787 9999999999865 343 111 11222221 21 1
Q ss_pred c-cccCCeEEEEeCCCCeEEEEeCCCCeEEEeeecccc
Q 013348 166 S-IAFQNHILLCDIVGQRIMRLNRESGVCSNFQFSNFA 202 (444)
Q Consensus 166 l-a~~~~~LyIADT~nhRIRkvdl~tG~vST~~fsg~g 202 (444)
+ ....+.|||.+-..++|-.+|.++..+..+.+...+
T Consensus 85 ~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k~~~~~~~ 122 (369)
T 3s9j_A 85 RPSPDSQYILVAQNNISRLSSINSQGEIIRNYNFQTPE 122 (369)
T ss_dssp EESSSTTSEEEEEGGGTEEEEECTTCCEEEEEECCCTT
T ss_pred EEecCCCEEEEEeCCcceEEEECCCceEEEEEecCCCc
Confidence 1 234567999998889999999988888888776655
No 322
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=24.47 E-value=4.5e+02 Score=24.73 Aligned_cols=158 Identities=11% Similarity=0.052 Sum_probs=0.0
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEECCCCeEEEeccCCCcCccCCcchhhhhcccCcccccCccccCCCCCCCCCccee
Q 013348 4 AASFYHKDDDCLYIVDSENHAIRRADMGRRVLETVYPTSGISKKNNSLWAWIMEKLGFERDNDTKSEKLDPQSLIFPWHL 83 (444)
Q Consensus 4 ~GIa~D~~g~~LYVADTeNHaIRkIDl~tg~VtTVAGtG~~~~~~~~l~g~~~~~~G~a~~a~~~~~~~~~~~Ln~P~gL 83 (444)
..+++ ++..|+.+.. ++.||..|+.++........... .-.
T Consensus 283 ~~~~~--~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~------------------------------------~v~ 323 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSL-DTSIRVWDVETGNCIHTLTGHQS------------------------------------LTS 323 (445)
T ss_dssp EEEEE--CSSEEEEEET-TSCEEEEETTTCCEEEEECCCCS------------------------------------CEE
T ss_pred EEEEE--CCCEEEEEeC-CCeEEEEECCCCCEEEEEcCCcc------------------------------------cEE
Q ss_pred EEcCCCeEEEEeCCCCEEEEEECCCCcEEEeecCCccceeecceehhhhhhhhhcCCcccccccccccccccCCCccccc
Q 013348 84 MKSEDDNLLIINRSFETLWIMDLASGEIKEAVKGFSKVLEICGVLVMEKVFLLKQMPQDWLLHQIDSSCSLKELPYAGLI 163 (444)
Q Consensus 84 ~~d~dG~LYIADagnh~IrkIDl~tG~I~TiagG~~~~~~~~G~li~~~~a~l~~~~~~~~~~~~~~~~~~~Gip~a~~~ 163 (444)
.+..++.++++-...+.|+.+|+.+|+......+ .......+
T Consensus 324 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------------------------~~~~~~~v 365 (445)
T 2ovr_B 324 GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG--------------------------------------PNKHQSAV 365 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEEECS--------------------------------------TTSCSSCE
T ss_pred EEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEcc--------------------------------------CCCCCCCE
Q ss_pred ccccccCCeEEEEeCCCCeEEEEeCCCCeEEEee--eccccccCCceeeee-ccceeeecccccCCcccceeeeeecCCC
Q 013348 164 SSSIAFQNHILLCDIVGQRIMRLNRESGVCSNFQ--FSNFAILGLPYWFAF-PLERVYAVAGGHQGSWTDHIQRCSLLPG 240 (444)
Q Consensus 164 Sgla~~~~~LyIADT~nhRIRkvdl~tG~vST~~--fsg~g~lg~P~~l~~-PL~~v~~~~~~~~g~~~~~i~~v~~~pG 240 (444)
..++- .+.++++=+....|+.+|+.+|.....- +...+.-+....+.+ |-......|.. .|+...+|.=+++-+.
T Consensus 366 ~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 366 TCLQF-NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEE-CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS-SSSSCCEEEEEECCCC
T ss_pred EEEEE-CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc-CCCCccEEEEEECCCC
No 323
>2kps_A Uncharacterized protein; beta strand, figure eight, figure 8, structural genomics, PSI-2, protein structure initiative; NMR {Desulfitobacterium hafniense Y51} PDB: 2l3u_A
Probab=23.13 E-value=33 Score=28.09 Aligned_cols=23 Identities=22% Similarity=0.367 Sum_probs=20.1
Q ss_pred cCCCeeeEEEeeeCCCCcccccc
Q 013348 237 LLPGRIDIKVNVDIPSDTELVES 259 (444)
Q Consensus 237 ~~pGri~i~v~v~~P~~~el~~p 259 (444)
+.+|..++.|.|.+|.|++++++
T Consensus 55 l~~G~~~vpv~v~lP~gv~vv~~ 77 (98)
T 2kps_A 55 KAVGEHTVKIYWQLPAGIEMVSI 77 (98)
T ss_dssp CCSSCEEEECCCBCSSCCCCCCC
T ss_pred CCCCeEEEeEEEECCCCEEEEec
Confidence 46788889999999999999885
No 324
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=22.49 E-value=1.4e+02 Score=30.43 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=29.4
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECCCCcE-EEeec
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLASGEI-KEAVK 116 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~tG~I-~Tiag 116 (444)
.+.|++.+++..+++-...+.|+.+|+.++.. .++.+
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g 395 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS 395 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec
Confidence 36789999888888888889999999988764 44543
No 325
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=22.27 E-value=2.2e+02 Score=28.38 Aligned_cols=27 Identities=11% Similarity=0.167 Sum_probs=21.4
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEECCCC
Q 013348 3 PAASFYHKDDDCLYIVDSENHAIRRADMGRR 33 (444)
Q Consensus 3 P~GIa~D~~g~~LYVADTeNHaIRkIDl~tg 33 (444)
++.|++ ++..|||+ .++.|+.+|+.+.
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~sl 116 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEEL 116 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSST
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchhh
Confidence 467888 67799999 6689999997543
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=20.73 E-value=4.5e+02 Score=23.40 Aligned_cols=28 Identities=7% Similarity=0.115 Sum_probs=20.6
Q ss_pred CCeEEEEeC-----CCCEEEEEECCCCcEEEee
Q 013348 88 DDNLLIINR-----SFETLWIMDLASGEIKEAV 115 (444)
Q Consensus 88 dG~LYIADa-----gnh~IrkIDl~tG~I~Tia 115 (444)
++.|||.-- ..+.++++|+.+++-+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 378998732 3577999999988776663
No 327
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=20.20 E-value=3.5e+02 Score=24.10 Aligned_cols=28 Identities=14% Similarity=0.149 Sum_probs=21.8
Q ss_pred cceeEEcCCCeEEEEeCCCCEEEEEECC
Q 013348 80 PWHLMKSEDDNLLIINRSFETLWIMDLA 107 (444)
Q Consensus 80 P~gL~~d~dG~LYIADagnh~IrkIDl~ 107 (444)
.+.++++++|.++++-...++|+.++..
T Consensus 257 v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 257 LWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 4678888888877777777888888754
Done!