BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013350
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZK33|LETM1_CHICK LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Gallus gallus GN=LETM1 PE=2 SV=1
Length = 752
Score = 312 bits (799), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/331 (48%), Positives = 227/331 (68%), Gaps = 6/331 (1%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L ++++G LSRRER+Q R AD+FRLVP VF++VPF
Sbjct: 158 LKHYYHGFRLLWIDTKIAARMLWRILHGNTLSRRERRQFLRICADLFRLVPFLVFLVVPF 217
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV LKLFPNMLPSTF+ K ++EE LK++L ++E AKFLQDT++EMA + + ++G
Sbjct: 218 MEFLLPVALKLFPNMLPSTFETKSKKEERLKKQLRVKLELAKFLQDTIEEMALKNKAAKG 277
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
K D F K+R TG SN+EIL F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 278 NVTK----DFSTFFQKIRETGERPSNEEILRFSKLFEDELTLDNLTRPQLVALCKLLELQ 333
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L RL+ IK DDKMI EGV+SL+ EL+ ACR RG+ L EE +R+
Sbjct: 334 SIGTNNFLRFQLTMRLRTIKADDKMIAEEGVDSLTVKELQAACRARGMRALGVTEERLRE 393
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WLDL LN +P+SLLILSRA + + P + ++ TL +LP+ V V E
Sbjct: 394 QLKQWLDLHLNQEIPTSLLILSRAMYLPDTLSPADQLKTTLQTLPESVAKEAQVKVAEVE 453
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQ 365
+ + +LE +E I++E EE+E E+
Sbjct: 454 GEKVDNKARLEATLQEEAAIRKENEEKEMER 484
>sp|Q0VCA3|LETM1_BOVIN LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Bos
taurus GN=LETM1 PE=2 SV=1
Length = 732
Score = 295 bits (754), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 227/338 (67%), Gaps = 7/338 (2%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L ++++G L+RRER+Q R AD+FRLVP F++VPF
Sbjct: 147 LRHYYHGFRLLWIDTKIAARMLWRILHGHSLTRRERRQFLRICADLFRLVPFLFFVVVPF 206
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV +KLFPNMLPSTF+ + +EE LK+ L ++E AKFLQDT++EMA + + ++G
Sbjct: 207 MEFLLPVAVKLFPNMLPSTFETQSSKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKG 266
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 267 SATK----DFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQ 322
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+ L E+ +R
Sbjct: 323 SIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRG 382
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WL+L L+ +P+SLLILSRA + + P + +++TL +LP+ V V E
Sbjct: 383 QLKQWLELHLHQEIPTSLLILSRAMYLPETLSPADQLKSTLQTLPEIVAKEAQVKVAEVE 442
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAV 372
+ + KLE +QEE ++E E+E Q K + AV
Sbjct: 443 GEQVDNKAKLEA-TLQEEAAIQQEHREKELQRKSQAAV 479
>sp|Q1LY46|LETM1_DANRE LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Danio rerio GN=letm1 PE=3 SV=2
Length = 757
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 11/352 (3%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D I+ R+L +++NG LSRRER+Q RT AD+FRL+P VFIIVPF
Sbjct: 168 VKHYYHGFRLLWIDTTIAVRMLWRVLNGHILSRRERRQFLRTCADVFRLLPFLVFIIVPF 227
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV LKLFPNMLPSTF+ + ++EE LK+ L ++E AKFLQDT++E+A + S+G
Sbjct: 228 MEFLLPVALKLFPNMLPSTFETQSKKEERLKKELRVKLEMAKFLQDTIEEIALRNKASKG 287
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
E+ F K+R +G SN++I+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 288 N----VTEEFSTFFQKIRDSGEIPSNEQIIRFSKLFEDELTLDNLTRPQLVALCKLLELQ 343
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L +L+ I+ DDK+I EGV+SL+ EL+ ACR RG+ L EE +R+
Sbjct: 344 SIGTNNFLRFQLIMKLRAIRADDKLIAEEGVDSLTANELQAACRVRGMRALGVTEERLRE 403
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WL+L LN +P+SLL+LSRA + + P + ++ TL +LP+ + V +
Sbjct: 404 QLKQWLELHLNQHIPTSLLLLSRAMFLPDTLSPADQLKTTLQNLPEIMAKEAQVKVAELD 463
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQ-----AKMKEAVRSRKDVALE 381
S + + KLE +E I++E E E E+ K KE +S++ LE
Sbjct: 464 FSKVDNKTKLETTLQEEAAIRQENRERELERLADAAEKAKEQTQSQEAEVLE 515
>sp|Q0VA06|LETM1_XENTR LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Xenopus tropicalis GN=letm1 PE=2 SV=1
Length = 760
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 247/375 (65%), Gaps = 17/375 (4%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L +++NG +SRRER+Q R AD+FRLVP VF+IVPF
Sbjct: 163 IKHYYHGFRLLWIDTKIAARMLRQILNGHAMSRRERRQFLRICADLFRLVPFLVFVIVPF 222
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV LKLFPNMLPSTF+ ++EE LK+ L ++E AKFLQDT++E+A + ++
Sbjct: 223 MEFLLPVALKLFPNMLPSTFETFSKKEERLKKELRVKLELAKFLQDTIEEIALRNKAAK- 281
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
GD+ TAE F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 282 GDV--TAE-FATFFQKIRSTGERPSNEEIVRFSKLFEDELTLDNLTRPQLVALCKLLELQ 338
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L +L+ IK DDK+I EG++SL+ EL+ ACR RG+ L E+ +++
Sbjct: 339 SIGTNNFLRFQLTMKLRSIKADDKLIADEGLDSLTVTELQAACRARGMRALGVTEDRLKE 398
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WL+L L+ +P+SLL+LSRA + + P + ++ TL +LP+ V V E
Sbjct: 399 QLKQWLELHLDQEIPTSLLLLSRALYLPDTLSPADQLKTTLQTLPESVAKEAQVKVAAVE 458
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQ----AKMKEAVRSRKDV--ALE-----EM 383
+ + KLE +EE I++E +E+E E+ AK + V ++ DV A E EM
Sbjct: 459 CEKVDNKTKLEATLQEEEAIRKENQEKEMERLADAAKESQQVAAKVDVQSAPEEAISGEM 518
Query: 384 TDPTAKEAQEQAKAK 398
TA A E A A+
Sbjct: 519 KTATADTAAEPAVAQ 533
>sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Rattus norvegicus GN=Letm1 PE=1 SV=1
Length = 739
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 237/364 (65%), Gaps = 14/364 (3%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L +++NG L+RRER+Q R AD+FRLVP VF++VPF
Sbjct: 160 LKHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRICADLFRLVPFLVFVVVPF 219
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV +KLFPNMLPSTF+ + +EE LK+ L ++E AKFLQDT++EMA + + ++G
Sbjct: 220 MEFLLPVVVKLFPNMLPSTFETQSIKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKG 279
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 280 NATK----DFSAFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQ 335
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+ L E+ ++
Sbjct: 336 SIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARGMRALGVTEDRLKG 395
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WLDL L H +P+SLLILSRA + + P + +++TL +LP+ V V A E
Sbjct: 396 QLKQWLDLHLYHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAKEAQVKAAEVE 455
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAVRSRKDVALE--EMTDPTAKEAQ 392
+ + KLE +E I++E EE +K A + KD+ E E T P A+
Sbjct: 456 GEQVDNKAKLEATLQEEAAIQQEHLEE------LKRAAETAKDIQPEVAEATVPGRPGAE 509
Query: 393 EQAK 396
Q K
Sbjct: 510 LQPK 513
>sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Mus
musculus GN=Letm1 PE=2 SV=1
Length = 738
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 230/347 (66%), Gaps = 12/347 (3%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L +++NG L+RRER+Q R AD+FRLVP VF++VPF
Sbjct: 160 LRHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRICADLFRLVPFLVFVVVPF 219
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV +KLFPNMLPSTF+ + +EE LK+ L ++E AKFLQDT++EMA + + ++G
Sbjct: 220 MEFLLPVVVKLFPNMLPSTFETQSIKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKG 279
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 280 NATK----DFSAFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQ 335
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+ L E+ ++
Sbjct: 336 SIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARGMRALGVTEDRLKG 395
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WLDL L+H +P+SLLILSRA + + P + +++TL +LP+ V V E
Sbjct: 396 QLKQWLDLHLHHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAKEAQVKVAEVE 455
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEEEEQAKMKEAVRSRKDVALE 381
+ + KLE +E I++E EE +K A + KD+ E
Sbjct: 456 GEKVDNKAKLEATLQEEAAIQQEHLEE------LKRASEAVKDIQPE 496
>sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Homo sapiens GN=LETM1 PE=1 SV=1
Length = 739
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 222/328 (67%), Gaps = 6/328 (1%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++HY+ G +LLW D +I++R+L +++NG L+RRER+Q R AD+FRLVP VF++VPF
Sbjct: 161 LKHYYHGFRLLWIDTKIAARMLWRILNGHSLTRRERRQFLRICADLFRLVPFLVFVVVPF 220
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPV +KLFPNMLPSTF+ + +EE LK+ L ++E AKFLQDT++EMA + + ++G
Sbjct: 221 MEFLLPVAVKLFPNMLPSTFETQSLKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKG 280
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
K D F K+R TG SN+EI+ F+KLF DELTLDN++RP+LV +CK + +
Sbjct: 281 SATK----DFSVFFQKIRETGERPSNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQ 336
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVEE-MRQ 274
GT+ +LR+ L RL+ IK DDK+I EGV+SL+ EL+ ACR RG+ L E+ +R
Sbjct: 337 SIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRG 396
Query: 275 QLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEVVDTVGVTALPSE 334
QL+ WLDL L+ +P+SLLILSRA + + P + +++TL +LP+ V V E
Sbjct: 397 QLKQWLDLHLHQEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEIVAKEAQVKVAEVE 456
Query: 335 DSISERRRKLEFLEMQEELIKEEEEEEE 362
+ + KLE +E I++E E+E
Sbjct: 457 GEQVDNKAKLEATLQEEAAIQQEHREKE 484
>sp|P91927|A60DA_DROME LETM1 and EF-hand domain-containing protein anon-60Da,
mitochondrial OS=Drosophila melanogaster GN=Letm1 PE=2
SV=2
Length = 1013
Score = 261 bits (666), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 193/286 (67%), Gaps = 6/286 (2%)
Query: 39 HYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFME 98
HY+ G +LL+ D+ I S+LL +++NGK L+RRE +QL RTT+D+FRL+P +VFIIVPFME
Sbjct: 191 HYYHGFRLLFIDVAICSKLLWRVLNGKTLTRRENKQLQRTTSDLFRLIPFSVFIIVPFME 250
Query: 99 FLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGD 158
LLP+F+K FP MLPSTFQ +E L++ L R+E AKFLQ T+ +M VQ+
Sbjct: 251 LLLPLFIKFFPGMLPSTFQTSTDRQEKLRQSLSVRLEVAKFLQQTLDQMP--VQHKEHS- 307
Query: 159 IKKTAEDLDEFMNKVRTGA-GVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPF 217
+ A+ + F K+R VSNDEI+ FAK F+DE+TLD++SR +L +C+ + ++
Sbjct: 308 -SEEAKQFEAFFTKIRNPTEPVSNDEIIKFAKRFDDEITLDSLSREQLAALCRVLELNTI 366
Query: 218 GTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQL 276
GT LR+ LR +L+ + DD++I EGV+SL EL+QAC+ RG+ L+ E +R QL
Sbjct: 367 GTTTLLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGMRAYGLTEERLRFQL 426
Query: 277 RDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLSSLPDEV 322
++W+DLSLN VP +LL+LSR +S + ++ T+ LPD V
Sbjct: 427 KEWIDLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLPDAV 472
>sp|Q7TNU7|LETM2_MOUSE LETM1 domain-containing protein LETM2, mitochondrial OS=Mus
musculus GN=Letm2 PE=2 SV=1
Length = 480
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 209/312 (66%), Gaps = 11/312 (3%)
Query: 27 RHWKDEFKSTMQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLV 86
R + + + +++Y+ G LLW D ++++R++ +L++G L+RRER++L RT AD+FRLV
Sbjct: 118 RSLRQKIVNELKYYYKGFSLLWIDTKVAARIVWRLLHGNALTRRERRRLLRTCADVFRLV 177
Query: 87 PVAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKE 146
P VFIIVPFMEFL+PVFLKLFP+MLPSTF+ + ++EE K+ + A++E AKFLQ+T+ E
Sbjct: 178 PFMVFIIVPFMEFLIPVFLKLFPDMLPSTFESESKKEEKQKKTMAAKLEIAKFLQETMTE 237
Query: 147 MAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLV 206
MA+ ++ GD + L ++ +V+TG S EI+ F+KLF D+L L+++ RP+LV
Sbjct: 238 MARR-NRAKLGD---ASSQLSSYVKQVQTGHKPSTKEIVRFSKLFKDQLALEHLDRPQLV 293
Query: 207 NMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL 266
+CK + + FGT+ LR+ L L+ IK DD++I EGV++LS +EL+ ACR RG+ L
Sbjct: 294 ALCKLLELQTFGTNNLLRFQLLMTLKSIKADDEIIAKEGVKALSVSELQSACRARGMRSL 353
Query: 267 -LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFS-VSGKVRPEEAVQATLSSLPDEVVD 324
L+ E++ QQL WLDL L +VP SLL+LSR F + K +P E + P+
Sbjct: 354 GLTEEQLCQQLTGWLDLHLKENVPPSLLLLSRTFYLIDVKPKPIELPPNIETPKPN---- 409
Query: 325 TVGVTALPSEDS 336
+G+ P +S
Sbjct: 410 -LGIPTPPPPES 420
>sp|Q08179|MDM38_YEAST Mitochondrial distribution and morphology protein 38
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MDM38 PE=1 SV=1
Length = 573
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 217/393 (55%), Gaps = 60/393 (15%)
Query: 22 LGVKLRHWKDEFKSTMQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTAD 81
L VK++H ++HY GTKLL +I++S++LL+K G LSRRER QL RT D
Sbjct: 83 LMVKVKH-------ALKHYANGTKLLGYEIKVSTKLLIKFAQGYELSRRERNQLRRTMGD 135
Query: 82 IFRLVPVAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIA-RIEYAKFL 140
+FRL+P + F+I+PF E LP LKLFPN+LPST++ ++++A + +LI R + ++FL
Sbjct: 136 VFRLIPFSAFLIIPFAELFLPFALKLFPNLLPSTYESG-KDKQAKRNKLIEIRKKTSEFL 194
Query: 141 QDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGV--------SNDEILAFAKLFN 192
+T++E N + + AE +F+N R +DEI A A++F
Sbjct: 195 HETLEE-----SNLITYNTIENAEKKQKFLNFFRKLYSAKEGKIMTFQHDEISAIAQMFK 249
Query: 193 DELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEA 252
++ LDN+SRP+L M K+M + PFG D LRY +R +L++I NDDK I EGVESLS+
Sbjct: 250 NDSVLDNLSRPQLAAMSKFMSLRPFGNDNMLRYQIRSKLKDIMNDDKTIDYEGVESLSQE 309
Query: 253 ELRQACRDRGLLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEE-- 309
EL QAC RG+ +S E++ L+ WL+L L +PS L++LS F+ G P+E
Sbjct: 310 ELYQACVSRGMKAYGVSKEDLVDNLKVWLELRLRQKIPSVLMVLSSTFTFGG--LPKENY 367
Query: 310 --------------------------AVQATLSSLPDEVVDTVGVTALPSEDSISERRRK 343
+ LSS+PD V + + S+ S +E +
Sbjct: 368 SKAFSPLAEKKETKSKYDDLLDLYYDGILQVLSSIPDPVYNVAKLDVSESKSSAAETEAE 427
Query: 344 LEFLEMQEELIKEEEEEEE----EEQAKMKEAV 372
+ E + IK EE+ EE +E+A KE+V
Sbjct: 428 KQVAEKK---IKTEEKPEETAIPKEEATAKESV 457
>sp|Q2VYF4|LETM2_HUMAN LETM1 domain-containing protein LETM2, mitochondrial OS=Homo
sapiens GN=LETM2 PE=2 SV=2
Length = 491
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 198/282 (70%), Gaps = 9/282 (3%)
Query: 23 GVKLRHWKDEFKST----MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRT 78
G++++ K ++ +++Y+ G LLW D ++++R++ +L++G+ L+RRER++L RT
Sbjct: 112 GMEIKEGKQSYRQKIMDELKYYYNGFYLLWIDAKVAARMVWRLLHGQVLTRRERRRLLRT 171
Query: 79 TADIFRLVPVAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAK 138
D FRLVP VF+IVPFMEFLLPVFLKLFP MLPSTF+ + ++EE K+++ ++E AK
Sbjct: 172 CVDFFRLVPFMVFLIVPFMEFLLPVFLKLFPEMLPSTFESESKKEEKQKKKMAVKLELAK 231
Query: 139 FLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLD 198
FLQ+T+ EMA+ ++ GD + L ++ +V+TG S EI+ F+KLF D+L L+
Sbjct: 232 FLQETMTEMARR-NRAKMGD---ASTQLSSYVKQVQTGHKPSTKEIVRFSKLFEDQLALE 287
Query: 199 NISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQAC 258
++ RP+LV +CK + + FGT+ LR+ L +L+ IK DD++I EGV +LS +EL+ AC
Sbjct: 288 HLDRPQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAAC 347
Query: 259 RDRGLLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 299
R RG+ L L+ E++RQQL +W DL L +VP SLL+LSR F
Sbjct: 348 RARGMRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTF 389
>sp|Q5PQQ5|LETM2_RAT LETM1 domain-containing protein LETM2, mitochondrial OS=Rattus
norvegicus GN=Letm2 PE=2 SV=1
Length = 459
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 198/275 (72%), Gaps = 3/275 (1%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
+++Y+ G LLW D ++++R++ +L++G+ L+RRER++L RT AD+FRLVP VFIIVPF
Sbjct: 129 VKYYYNGFSLLWIDTKVAARIVWRLLHGQVLTRRERRRLLRTCADVFRLVPFVVFIIVPF 188
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFL+PVFLKLFP+MLPSTF+ + ++EE K+ + A++E AKFLQ+T+ EMAK ++
Sbjct: 189 MEFLIPVFLKLFPDMLPSTFESESKKEEKQKKMMGAKLEIAKFLQETMTEMAKR-NRAKL 247
Query: 157 GDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISP 216
D + L ++ +V+TG S EI+ F+KLF D+L L+++ RP+LV +CK + +
Sbjct: 248 DDDSSDSSQLSSYVKQVQTGHKPSTKEIVRFSKLFEDQLALEHLRRPQLVALCKLLELQA 307
Query: 217 FGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQ 275
FGT+ LR+ L L+ IK DD++I EGV++LS +EL+ ACR RG+ L L+ E++RQQ
Sbjct: 308 FGTNNLLRFQLLMTLRSIKADDEVIAKEGVKALSVSELQAACRARGMRSLGLTEEQLRQQ 367
Query: 276 LRDWLDLSLNHSVPSSLLILSRAFS-VSGKVRPEE 309
L +WLDL L +VP SLL+LSR F + K +P E
Sbjct: 368 LTEWLDLHLKENVPPSLLLLSRTFYLIDVKPKPIE 402
>sp|Q06493|YLH47_YEAST LETM1 domain-containing protein YLH47, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YLH47 PE=1 SV=1
Length = 454
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 194/326 (59%), Gaps = 26/326 (7%)
Query: 29 WKDEFKSTMQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPV 88
+K + + ++HYW G+KLL +I+ISS+LL+K G L+RRE QL RTT DI RLVP
Sbjct: 81 FKVKMQKALRHYWDGSKLLGLEIKISSKLLMKSAAGYPLTRRENLQLKRTTQDIVRLVPF 140
Query: 89 AVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMA 148
A F+I+PF E LLP LKLFPN+LPST++ + E L+ L++T K M+
Sbjct: 141 AAFLIIPFAELLLPFALKLFPNLLPSTYESSKKRENKLEN-----------LRNTRKLMS 189
Query: 149 KEVQNSRG----GDIKKTAEDL-DEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISR 202
+ ++N++ +I + + L + F VR TG S +++ A+LF D+ LDN++R
Sbjct: 190 EIIKNNKSHFKPNNISEEQKALFNRFYTHVRATGVPESRQQLIEVARLFTDDTVLDNVTR 249
Query: 203 PRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRG 262
P L+ + KYM + PFGTD LRY +R ++ E+K DD I E E LS +EL+ AC RG
Sbjct: 250 PYLIALAKYMNLQPFGTDVMLRYRIRYKMLELKKDDLSIYYEDAEQLSLSELKTACASRG 309
Query: 263 LLGLLSVEE--MRQQLRDWLDLSLNHSVPSSLLILSRAFSVSGKVRPEEAVQATLS---- 316
+ + VE + LR WL++ L +PS+LLI++ A++ G V+ +E++ L
Sbjct: 310 IRS-VDVEPSVLYSNLRLWLNMRLKDKIPSTLLIMATAYNY-GNVQSKESLYDALCDVLI 367
Query: 317 SLPDEVVDTVGVTALPSEDSISERRR 342
+PDE+ V V + ED S +++
Sbjct: 368 GIPDELYHEVKVNVV-KEDEASAKQK 392
>sp|Q28DA8|LETM2_XENTR LETM1 domain-containing protein LETM2, mitochondrial OS=Xenopus
tropicalis GN=letm2 PE=2 SV=1
Length = 444
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 187/257 (72%), Gaps = 5/257 (1%)
Query: 37 MQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPF 96
++H++ G +LL D ++++R++ +L++G+ L+RRER++L RT AD+FRLVP VF+IVPF
Sbjct: 108 IKHFYHGFRLLGIDTKVAARMVWRLLHGQVLTRRERRRLMRTCADLFRLVPFMVFVIVPF 167
Query: 97 MEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRG 156
MEFLLPVFLKLFP MLPSTF+ + ++EE +K++L A++E AKFLQ+T+ EMA+ + G
Sbjct: 168 MEFLLPVFLKLFPEMLPSTFETESKKEEKVKKKLAAKLEMAKFLQETISEMARRNKAETG 227
Query: 157 GDIKKTAEDLDEFMNKVR-TGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGIS 215
D T + ++ +VR TG S EI+ F+KLF DELTL+++ R +LV +C+ + +
Sbjct: 228 AD---TQQQFSSYVQQVRGTGEQPSTKEIVRFSKLFEDELTLEHLERSQLVALCRLLELP 284
Query: 216 PFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQ 274
P GT+ LR+ L +L+ I+ DD+MI EGVE+L+ AEL+ A R RG+ L L+ E++++
Sbjct: 285 PIGTNNLLRFQLMMQLRSIRADDEMISKEGVENLTVAELQAASRARGMRSLGLTEEQLKE 344
Query: 275 QLRDWLDLSLNHSVPSS 291
Q++ WLDL L +VP S
Sbjct: 345 QMKQWLDLHLKENVPPS 361
>sp|O13920|MDM28_SCHPO LETM1 domain-containing protein mdm28, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mdm28 PE=2 SV=3
Length = 485
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 204/321 (63%), Gaps = 16/321 (4%)
Query: 34 KSTMQHYWLGTKLLWADIRISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFII 93
K + H+W GTKLL +I+ISS+L+ K+ G L+RRE +QLTRT DI RLVP +VF++
Sbjct: 123 KGGVLHFWDGTKLLGVEIKISSKLVYKMAVGYELTRRESRQLTRTLKDIGRLVPFSVFVV 182
Query: 94 VPFMEFLLPVFLKLFPNMLPSTFQDKMREEEALKRRL-IARIEYAKFLQDTVKEMAKEVQ 152
VPF E LLP+ +KLFPN+LPSTF+D +++EA K +L R E + L+ T+K
Sbjct: 183 VPFAELLLPIAVKLFPNLLPSTFED-AKDKEAKKAQLRKTRNEVSNMLRSTLKSGKFTFS 241
Query: 153 NSRGGDIKKTAEDLDEFMNKVRT-GAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKY 211
N + +++ +F KVRT G S +E++ K F D++TLDN+SR +LV MC+Y
Sbjct: 242 NE-----TRESKEFRDFFQKVRTSGQSPSREELIEVCKYFKDDITLDNLSRAQLVAMCRY 296
Query: 212 MGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGL-LGLLSVE 270
M ++ FGTD LRY +R R+++I+ DD+ I EG+ SLS EL AC RG+ LS
Sbjct: 297 MNLNAFGTDPLLRYNIRHRMRQIRRDDRAIYIEGINSLSIPELFNACNSRGIRTQGLSPA 356
Query: 271 EMRQQLRDWLDLSLNHSVPSSLLILSRAFSVS---GKVRPE-EAVQATLSSLPDEVVDTV 326
+++++L WLD+ + H +PS +L+LS AFS G +A+Q TL+S+PDE+
Sbjct: 357 KLKEELSVWLDMRIKHGIPSVILMLSNAFSYGYNEGTYDSRWDALQDTLASIPDELYHET 416
Query: 327 GVTALPSEDSISERRRKLEFL 347
V +P++ +S + R LE L
Sbjct: 417 -VVDMPTKQ-VSNKER-LEIL 434
>sp|A3KN46|LTMD1_BOVIN LETM1 domain-containing protein 1 OS=Bos taurus GN=LETMD1 PE=2 SV=1
Length = 360
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Query: 43 GTKLLWADI----RISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFME 98
G ++LWAD RI + + + L RE + L + D+ + + + + I PF
Sbjct: 92 GLQMLWADGKKARRIKTNMWKHNIKFHQLPYREMEHLRQFRRDVTKCLFLGILSIPPFAN 151
Query: 99 FLLPVFLKLFPNML-------PSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEV 151
+L+ + + LFP L P D + AL+++ + E +L+ V +
Sbjct: 152 YLVFLLMYLFPRQLLIRHFWTPKQQIDFLDIYHALRKQ--SHPEILCYLEKVVPLI---- 205
Query: 152 QNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLF-NDELTLDNISRPRLVNMCK 210
S G + E K++ G + +ILA + F N L +D + ++ +C+
Sbjct: 206 --SDAG----LQWHMTELCTKMQRGTHPAVHDILALRECFANHPLGMDQLRALQMKALCR 259
Query: 211 YMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGLLSVE 270
M ++P+ LR+ L+ I DK + GV L+ E++ AC RGL E
Sbjct: 260 AMLLTPYLPSVLLRHRLKTHTTVIHQLDKALAKLGVGQLTAQEVKSACYLRGLNSTHIAE 319
Query: 271 E-MRQQLRDWLDLS 283
E R L +WL +S
Sbjct: 320 ERCRTWLGEWLQIS 333
>sp|Q28EM8|LTMD1_XENTR LETM1 domain-containing protein 1 OS=Xenopus tropicalis GN=letmd1
PE=2 SV=1
Length = 351
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 11/236 (4%)
Query: 52 RISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLKLFP-N 110
RI R+ + + L RE ++L + DI + PV + I PF +L+ V + FP
Sbjct: 95 RIKQRMNHQGIPFHQLPYREMEKLRQFRRDIIKAAPVVIISIPPFANYLVFVLMYFFPRQ 154
Query: 111 MLPSTFQDKMREEEALKRRLIARIE-YAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEF 169
+L F + EE L R+E Y + L + + K + + + +
Sbjct: 155 LLIRHFWTPKQREEFLDIYHRMRVEAYPEILDGLLNAVPKLSE-------RNLRNQMFQL 207
Query: 170 MNKVRTGAGVSNDEILAFAKLFN-DELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLR 228
+V+ G + + A F+ L + + ++ + + M ++P L++ L
Sbjct: 208 CTQVQHGTHPQVENLHAVCTAFSGPPLGMKRLDVQQMKALSRVMFLTPHLPAFLLQHRLG 267
Query: 229 RRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSVEEMRQQLRDWLDLS 283
+ EI+N D + GV LSE EL++AC RGL LS E+ L WL LS
Sbjct: 268 SHICEIQNLDCALLKLGVNELSEEELKRACYIRGLNSTHLSREDCETWLHCWLQLS 323
>sp|Q6P1Q0|LTMD1_HUMAN LETM1 domain-containing protein 1 OS=Homo sapiens GN=LETMD1 PE=1
SV=1
Length = 360
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 25/254 (9%)
Query: 43 GTKLLWADI----RISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFME 98
G ++LWAD RI + + + L RE + L + D+ + + + + I PF
Sbjct: 92 GLQMLWADAKKARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFAN 151
Query: 99 FLLPVFLKLFPNML-------PSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEV 151
+L+ + + LFP L P D + A +++ + E +L+ + ++
Sbjct: 152 YLVFLLMYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQ--SHPEIISYLEKVIPLISDAG 209
Query: 152 QNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLF-NDELTLDNISRPRLVNMCK 210
R L + K++ G + +ILA + F N L ++ + + + +
Sbjct: 210 LRWR----------LTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSR 259
Query: 211 YMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSV 269
M ++ + LR+ L+ I DK + G+ L+ E++ AC RGL +
Sbjct: 260 AMLLTSYLPPPLLRHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGE 319
Query: 270 EEMRQQLRDWLDLS 283
+ R L +WL +S
Sbjct: 320 DRCRTWLGEWLQIS 333
>sp|Q924L1|LTMD1_MOUSE LETM1 domain-containing protein 1 OS=Mus musculus GN=Letmd1 PE=2
SV=1
Length = 360
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 25/266 (9%)
Query: 43 GTKLLWADI----RISSRLLLKLVNGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFME 98
G ++LWAD RI + + + + LS RE + L + DI + + V + I PF
Sbjct: 92 GIQMLWADGKKARRIKADMWKQNLKFHQLSYREMEHLRQFRRDITKCLFVGLISIPPFAN 151
Query: 99 FLLPVFLKLFPNML-------PSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEV 151
+L+ + + LFP L P D + L+RR + E L+ ++ E
Sbjct: 152 YLVFLLMYLFPRQLLVKHFWTPKQQIDFLDVYHGLRRR--SHSEVITHLRRASTFVSHE- 208
Query: 152 QNSRGGDIKKTAEDLDEFMNKVRTGAGVSNDEILAFAKLFND-ELTLDNISRPRLVNMCK 210
K L + KV++G + ++LA F+ L + ++ + +
Sbjct: 209 ---------KLRRQLTDLCTKVQSGTHPAAQDVLALRDCFSTYPLGFSQLQASQMRALSQ 259
Query: 211 YMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQAEGVESLSEAELRQACRDRGLLGL-LSV 269
M ++P+ LR L+ I D+ + G+ L+ E++ AC RGL ++
Sbjct: 260 AMLLTPYLPPPLLRQRLKSHTTVIHQLDRALAKLGIGQLTAQEVKSACYLRGLNSTHIAD 319
Query: 270 EEMRQQLRDWLDLSLNHSVPSSLLIL 295
+ R L +WL +S + P L+L
Sbjct: 320 DRCRAWLGEWLHISCSLKEPELSLLL 345
>sp|B7LUN9|CAPP_ESCF3 Phosphoenolpyruvate carboxylase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ppc PE=3 SV=1
Length = 883
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNDADRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN + +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLSE 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B2VGA2|CAPP_ERWT9 Phosphoenolpyruvate carboxylase OS=Erwinia tasmaniensis (strain DSM
17950 / Et1/99) GN=ppc PE=3 SV=1
Length = 883
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 26/145 (17%)
Query: 110 NMLPSTFQDKMREEEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEF 169
+ML D +++ AL ++ R+E T+++++K +SR G+ E L
Sbjct: 13 SMLGKLLGDTIKD--ALGENILDRVE-------TIRKLSK---SSRAGNDAHRQELLSTL 60
Query: 170 MNKVRTGAGVSNDEILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRR 229
N +SNDE+L A+ F+ L L N++ +Y ISP G A +L +
Sbjct: 61 QN-------LSNDELLPVARAFSQFLNLTNVAE-------QYHTISPNGEGAKNPELLLQ 106
Query: 230 RLQEIKNDDKMIQAEGVESLSEAEL 254
Q +K + +A E+L L
Sbjct: 107 TFQRLKQQPNLTEAAVCEALGSLSL 131
>sp|Q57H97|CAPP_SALCH Phosphoenolpyruvate carboxylase OS=Salmonella choleraesuis (strain
SC-B67) GN=ppc PE=3 SV=1
Length = 883
Score = 39.3 bits (90), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|A9MI14|CAPP_SALAR Phosphoenolpyruvate carboxylase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=ppc PE=3 SV=1
Length = 883
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|Q8ZKM0|CAPP_SALTY Phosphoenolpyruvate carboxylase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|C0Q472|CAPP_SALPC Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi C (strain
RKS4594) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|A9N0G6|CAPP_SALPB Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B4T0W7|CAPP_SALNS Phosphoenolpyruvate carboxylase OS=Salmonella newport (strain
SL254) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B4TCQ2|CAPP_SALHS Phosphoenolpyruvate carboxylase OS=Salmonella heidelberg (strain
SL476) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B5QXQ1|CAPP_SALEP Phosphoenolpyruvate carboxylase OS=Salmonella enteritidis PT4
(strain P125109) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B5FPX1|CAPP_SALDC Phosphoenolpyruvate carboxylase OS=Salmonella dublin (strain
CT_02021853) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B4TQH2|CAPP_SALSV Phosphoenolpyruvate carboxylase OS=Salmonella schwarzengrund
(strain CVM19633) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B5RF49|CAPP_SALG2 Phosphoenolpyruvate carboxylase OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILDRVE-------TIRKLSK---SSRAGNEANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPDLND 119
Query: 243 A---EGVESLS 250
A + VESLS
Sbjct: 120 ATIKKAVESLS 130
>sp|B7MR83|CAPP_ECO81 Phosphoenolpyruvate carboxylase OS=Escherichia coli O81 (strain
ED1a) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|Q31U32|CAPP_SHIBS Phosphoenolpyruvate carboxylase OS=Shigella boydii serotype 4
(strain Sb227) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|Q0SY38|CAPP_SHIF8 Phosphoenolpyruvate carboxylase OS=Shigella flexneri serotype 5b
(strain 8401) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|Q32AB9|CAPP_SHIDS Phosphoenolpyruvate carboxylase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|Q1R3V5|CAPP_ECOUT Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain UTI89 /
UPEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|A1AID4|CAPP_ECOK1 Phosphoenolpyruvate carboxylase OS=Escherichia coli O1:K1 / APEC
GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B7MI92|CAPP_ECO45 Phosphoenolpyruvate carboxylase OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B2TWF1|CAPP_SHIB3 Phosphoenolpyruvate carboxylase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B1LNR6|CAPP_ECOSM Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain SMS-3-5
/ SECEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|P00864|CAPP_ECOLI Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12)
GN=ppc PE=1 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B1XBC1|CAPP_ECODH Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 /
DH10B) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|C5A0C2|CAPP_ECOBW Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B7NU44|CAPP_ECO7I Phosphoenolpyruvate carboxylase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B7UNT2|CAPP_ECO27 Phosphoenolpyruvate carboxylase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|Q3YV20|CAPP_SHISS Phosphoenolpyruvate carboxylase OS=Shigella sonnei (strain Ss046)
GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B6I5H2|CAPP_ECOSE Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain SE11)
GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B7NFQ6|CAPP_ECOLU Phosphoenolpyruvate carboxylase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
>sp|B1IVC2|CAPP_ECOLC Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=ppc PE=3 SV=1
Length = 883
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 123 EEALKRRLIARIEYAKFLQDTVKEMAKEVQNSRGGDIKKTAEDLDEFMNKVRTGAGVSND 182
++AL ++ R+E T+++++K +SR G+ E L N +SND
Sbjct: 24 KDALGEHILERVE-------TIRKLSK---SSRAGNDANRQELLTTLQN-------LSND 66
Query: 183 EILAFAKLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQEIKNDDKMIQ 242
E+L A+ F+ L L N + +Y ISP G A ++ R L+++KN ++ +
Sbjct: 67 ELLPVARAFSQFLNLANTAE-------QYHSISPKGEAASNPEVIARTLRKLKNQPELSE 119
Query: 243 ---AEGVESLS 250
+ VESLS
Sbjct: 120 DTIKKAVESLS 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,054,271
Number of Sequences: 539616
Number of extensions: 6331782
Number of successful extensions: 75614
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 1092
Number of HSP's that attempted gapping in prelim test: 60403
Number of HSP's gapped (non-prelim): 9780
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)