BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013351
(444 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554300|ref|XP_002518190.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
gi|223542786|gb|EEF44323.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
Length = 458
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/451 (82%), Positives = 400/451 (88%), Gaps = 21/451 (4%)
Query: 15 LSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTY 74
LS+ T SS SSS + S +KSVKLREDWR+RS+PIPPGGTYPAKDHCSRCGLCDTY
Sbjct: 8 LSLPTFISSSYSSSKDTNSNSSNKSVKLREDWRQRSRPIPPGGTYPAKDHCSRCGLCDTY 67
Query: 75 YIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQ 134
YI+HV++ACAFLGDGMSRIEGLE VVHGRGR+ DS D+ YLGVHEELLYARKTKPVEGAQ
Sbjct: 68 YISHVRNACAFLGDGMSRIEGLEAVVHGRGRKIDSSDEMYLGVHEELLYARKTKPVEGAQ 127
Query: 135 WTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLN 194
WTGIVTTIAIEMLK MV+AV+CVQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLN
Sbjct: 128 WTGIVTTIAIEMLKADMVDAVICVQSDPEDRLSPRPVLARTPQEVLAAKGVKPTLSPNLN 187
Query: 195 TLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTREGLDKFLKAA 233
TLALVEA+GVKRLLFCGVGCQVQ VDNGTREGLDKFLKAA
Sbjct: 188 TLALVEASGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAA 247
Query: 234 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 293
S EPETVLHYEFMQDYKVHLKHLDG IEEVPYFCLPA DLVDVIAPSCYSCFDYTNALAD
Sbjct: 248 SDEPETVLHYEFMQDYKVHLKHLDGRIEEVPYFCLPATDLVDVIAPSCYSCFDYTNALAD 307
Query: 294 LVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETV 353
LVVGYMGVPKY G+SMTQHPQY+TVRN+RG+EML LV+ LLEITPTISSGDRRPFVMETV
Sbjct: 308 LVVGYMGVPKYAGVSMTQHPQYVTVRNDRGREMLDLVRGLLEITPTISSGDRRPFVMETV 367
Query: 354 KADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGK 413
KADDNAK+G+GPSQ APKFVGN +AF +NL+GPKGLEFARYSLDYHTIRNYL+ NRAWGK
Sbjct: 368 KADDNAKLGKGPSQSAPKFVGNFLAFILNLIGPKGLEFARYSLDYHTIRNYLYTNRAWGK 427
Query: 414 KRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
RA++H PSYAKKIVEMYNQNGQIDQML +K
Sbjct: 428 ARAERHTPSYAKKIVEMYNQNGQIDQMLQNK 458
>gi|225433343|ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
gi|297741879|emb|CBI33314.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/428 (84%), Positives = 396/428 (92%), Gaps = 21/428 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKAYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 150 VQSDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 209
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHL
Sbjct: 210 ALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHL 269
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G+SMTQHPQY+
Sbjct: 270 DGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGVSMTQHPQYV 329
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 376
TVRNERG+EMLSLV+NLLEI PT SSGDRRPFVMETVKADDNAK+G+GPSQPAPKFVGNL
Sbjct: 330 TVRNERGREMLSLVENLLEIIPTTSSGDRRPFVMETVKADDNAKLGKGPSQPAPKFVGNL 389
Query: 377 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
IAF +NL+GPKGLEFARYSLDYHTIRNY++VNR WGK+RAD+HMPSYAKK+V++YNQNG+
Sbjct: 390 IAFILNLIGPKGLEFARYSLDYHTIRNYIYVNRMWGKQRADRHMPSYAKKLVDLYNQNGE 449
Query: 437 IDQMLSSK 444
ID+MLS+K
Sbjct: 450 IDKMLSNK 457
>gi|356534864|ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/428 (83%), Positives = 391/428 (91%), Gaps = 21/428 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K L++DWR +SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 25 KDTSLKQDWRTKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIERLE 84
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ D+LD+TYLGV+EELLYARK PVEGAQWTGIVTTIAIEMLK+GMVEAV+C
Sbjct: 85 PVVHGRGRKTDNLDETYLGVYEELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVEAVIC 144
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDR +PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 145 VQSDPDDRFAPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 204
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTR+GLDKFLKAAS PETVLHYEFMQDYKVHLKHL
Sbjct: 205 ALRSVEHHLNLDKLYVLGTNCVDNGTRQGLDKFLKAASQSPETVLHYEFMQDYKVHLKHL 264
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+GI MTQHPQY+
Sbjct: 265 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYSGIGMTQHPQYV 324
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 376
TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGPSQPAPKF+GNL
Sbjct: 325 TVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGPSQPAPKFIGNL 384
Query: 377 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAKKIV++YNQNGQ
Sbjct: 385 LAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAKKIVDLYNQNGQ 444
Query: 437 IDQMLSSK 444
I++MLS+K
Sbjct: 445 IEKMLSNK 452
>gi|297848696|ref|XP_002892229.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
gi|297338071|gb|EFH68488.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
Length = 461
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/458 (80%), Positives = 401/458 (87%), Gaps = 23/458 (5%)
Query: 8 AKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSR 67
+K S LP S + ++SSS S + + K VKLREDWR++SKPIPPGGTYPAKDHCSR
Sbjct: 6 SKLSLLPPCFSVV--NTSSSRSKDMNTEPKKKVKLREDWREKSKPIPPGGTYPAKDHCSR 63
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLCDTYYIAHVK+ACAFLGDGMSRIE LE VVHGRGR+ DSL+DTY GVH+E LYARK
Sbjct: 64 CGLCDTYYIAHVKEACAFLGDGMSRIESLEPVVHGRGRKPDSLEDTYFGVHQEQLYARKL 123
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKP 187
KPVEGAQWTGIVTTIAIEMLK+ MVEAVVCVQSDP+DRLSPRPVLARTPEEVLAA+GVKP
Sbjct: 124 KPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQSDPEDRLSPRPVLARTPEEVLAARGVKP 183
Query: 188 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTREGL 226
TLSPNLNTL L+EA+GVKRLLFCGVGCQVQ VDNGTR+GL
Sbjct: 184 TLSPNLNTLELIEASGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRDGL 243
Query: 227 DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFD 286
DKFLKAAS EPETVLHYEFMQDYKV LKHLDGHIEEVPYF LPANDLVDVIAPSCYSCFD
Sbjct: 244 DKFLKAASKEPETVLHYEFMQDYKVQLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFD 303
Query: 287 YTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR 346
YTNALADLV+GYMGVPKY+G++MT HPQYITVRNERGKEMLSLV+NLLEITPTISSGDRR
Sbjct: 304 YTNALADLVIGYMGVPKYSGLNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRR 363
Query: 347 PFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLH 406
PFV ETVKADDNAK GRGP+QPAP FVGN+IAF ++LVGPKGLEFARYSLDYHTIRNYLH
Sbjct: 364 PFVTETVKADDNAKFGRGPAQPAPIFVGNIIAFILSLVGPKGLEFARYSLDYHTIRNYLH 423
Query: 407 VNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
VNR WGK+RA+ HMPSYAKKIVEMYN+NG ID+MLS K
Sbjct: 424 VNRKWGKQRANIHMPSYAKKIVEMYNKNGHIDKMLSRK 461
>gi|449487600|ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymethyl chlorophyll a
reductase, chloroplastic-like [Cucumis sativus]
Length = 459
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/459 (80%), Positives = 410/459 (89%), Gaps = 25/459 (5%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKXDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGV 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQSDP+DRLSPRP+LARTPEEVLAA+GV
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGV 178
Query: 186 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTRE 224
KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ VDNGTRE
Sbjct: 179 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRE 238
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 284
GLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC
Sbjct: 239 GLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 298
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGD 344
FDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ LEITPTIS+G+
Sbjct: 299 FDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGN 358
Query: 345 RRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 404
RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARYSLDYHTIRN+
Sbjct: 359 RRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNH 418
Query: 405 LHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 443
L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 419 LYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|449433213|ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a reductase,
chloroplastic-like [Cucumis sativus]
Length = 459
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/459 (80%), Positives = 410/459 (89%), Gaps = 25/459 (5%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKTDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGV 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQSDP+DRLSPRP+LARTPEEVLAA+GV
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGV 178
Query: 186 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTRE 224
KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ VDNGTRE
Sbjct: 179 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRE 238
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 284
GLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC
Sbjct: 239 GLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 298
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGD 344
FDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ LEITPTIS+G+
Sbjct: 299 FDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGN 358
Query: 345 RRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 404
RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARYSLDYHTIRN+
Sbjct: 359 RRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNH 418
Query: 405 LHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 443
L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 419 LYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|356577586|ref|XP_003556905.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/465 (77%), Positives = 400/465 (86%), Gaps = 34/465 (7%)
Query: 1 MTCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYP 60
M+ AK SSL +S++ SS SKD S L++DWR +SKPIPPGGTYP
Sbjct: 1 MSSLFLYAKLSSLSISLTI---------RSSSSKDTS----LKQDWRTKSKPIPPGGTYP 47
Query: 61 AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
AKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS IE LE VVHGRGR+ D++D+TYLGV+EE
Sbjct: 48 AKDHCSRCGLCDTYYIAHVKNACAFLGDGMSNIERLEPVVHGRGRKTDNMDETYLGVYEE 107
Query: 121 LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL 180
LLYARK +P EGAQWTGIVTTIAIEMLK+GMVEAV+CVQSDPDD+ +PRPVLARTPEEVL
Sbjct: 108 LLYARKLQPAEGAQWTGIVTTIAIEMLKSGMVEAVICVQSDPDDKFAPRPVLARTPEEVL 167
Query: 181 AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VD 219
AAKGVKPTLSPNLNTLALVEAAGVKRLLFC VGCQVQ VD
Sbjct: 168 AAKGVKPTLSPNLNTLALVEAAGVKRLLFCVVGCQVQALRSVEHHLNLDKLYVLGTNCVD 227
Query: 220 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 279
NGTREGLDKFLKAAS PE VLHYEFMQDYKVHLKHLDGHIEEVPYFCLP NDLVDVIAP
Sbjct: 228 NGTREGLDKFLKAASQSPEIVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPTNDLVDVIAP 287
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 339
SCYSCFDYTNAL DLVVGYMGVPK++GI MTQHPQY+TVRN+RG+EMLSL++ LLEITPT
Sbjct: 288 SCYSCFDYTNALVDLVVGYMGVPKHSGIGMTQHPQYVTVRNKRGREMLSLIEKLLEITPT 347
Query: 340 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 399
IS+G+RRPFVMETVKADD AK+GRGPSQPAPKF+G+L+AF +NLVGPKGLEFARYSLDYH
Sbjct: 348 ISTGNRRPFVMETVKADDEAKLGRGPSQPAPKFIGSLLAFILNLVGPKGLEFARYSLDYH 407
Query: 400 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
TIRNYLHVNR WGK+RADKHMP+YAKKIV+ YNQNGQI++MLS+K
Sbjct: 408 TIRNYLHVNRMWGKERADKHMPTYAKKIVDSYNQNGQIEKMLSNK 452
>gi|30678943|ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
gi|75150253|sp|Q8GS60.1|HCAR_ARATH RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|25083091|gb|AAN72040.1| unknown protein [Arabidopsis thaliana]
gi|26451024|dbj|BAC42618.1| unknown protein [Arabidopsis thaliana]
gi|30387563|gb|AAP31947.1| At1g04620 [Arabidopsis thaliana]
gi|332189601|gb|AEE27722.1| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
Length = 462
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/428 (83%), Positives = 385/428 (89%), Gaps = 21/428 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 35 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 94
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 95 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 154
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQ
Sbjct: 155 VQSDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQ 214
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTR+GLDKFLKAAS EPETVLHYEFMQDYKV LKHL
Sbjct: 215 ALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHL 274
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DGHIEEVPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYI
Sbjct: 275 DGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYI 334
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 376
TVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+QPAP FVGN+
Sbjct: 335 TVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNI 394
Query: 377 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKKIVEMYN+NGQ
Sbjct: 395 IAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQ 454
Query: 437 IDQMLSSK 444
ID+MLS K
Sbjct: 455 IDKMLSKK 462
>gi|224110688|ref|XP_002315601.1| predicted protein [Populus trichocarpa]
gi|222864641|gb|EEF01772.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/423 (83%), Positives = 380/423 (89%), Gaps = 21/423 (4%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
REDWR+RSKPIPPGG YPAKDHCS+CGLCDTYY+AHVK+ACAFLGDGMS+IEGLE VVHG
Sbjct: 34 REDWRQRSKPIPPGGIYPAKDHCSQCGLCDTYYVAHVKNACAFLGDGMSKIEGLEPVVHG 93
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
RGR+ DS D+ Y GVHEELLYARKTKPVEGAQWTGIVT+IAIEMLK+GMVEAV+CVQSDP
Sbjct: 94 RGRKADSFDEAYFGVHEELLYARKTKPVEGAQWTGIVTSIAIEMLKSGMVEAVICVQSDP 153
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----- 217
+DR SPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 154 EDRFSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 213
Query: 218 ----------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 261
VDNGTREGLDKFLKAAS EPETVLHYEFMQDYKVHLKHLDG IE
Sbjct: 214 EHHLNLDKLYVLGTNCVDNGTREGLDKFLKAASDEPETVLHYEFMQDYKVHLKHLDGRIE 273
Query: 262 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 321
EVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G+SMTQHPQYITVRNE
Sbjct: 274 EVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGVSMTQHPQYITVRNE 333
Query: 322 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 381
RG+EM+ LVKNLLEITPTI+SGDRRPFVMETV ADDNAK+G+GPSQP PKF+GN IAF +
Sbjct: 334 RGREMIGLVKNLLEITPTINSGDRRPFVMETVNADDNAKLGKGPSQPLPKFIGNFIAFLL 393
Query: 382 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQML 441
NLVGPKGLEFARYSLDYHTIRNYL+ NR WGK RAD+H PSYAKKIVE YN+NGQID ML
Sbjct: 394 NLVGPKGLEFARYSLDYHTIRNYLYTNRTWGKDRADRHTPSYAKKIVESYNKNGQIDLML 453
Query: 442 SSK 444
+K
Sbjct: 454 QNK 456
>gi|75144471|sp|Q7XTG7.2|HCAR_ORYSJ RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|38344778|emb|CAE01504.2| OSJNBb0026L04.9 [Oryza sativa Japonica Group]
gi|38347660|emb|CAE04699.2| OSJNBa0041M06.1 [Oryza sativa Japonica Group]
gi|116309054|emb|CAH66165.1| H0107B07.4 [Oryza sativa Indica Group]
Length = 471
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/461 (77%), Positives = 393/461 (85%), Gaps = 30/461 (6%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQSDPDDRL+P PVLARTP+EV+AA
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQSDPDDRLAPMPVLARTPDEVIAA 190
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNG 221
KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ VDNG
Sbjct: 191 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNG 250
Query: 222 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 281
TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA DLVDVIAPSC
Sbjct: 251 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSC 310
Query: 282 YSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 341
YSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVRN+RG+EMLSLV+ LLE TPT+S
Sbjct: 311 YSCFDYTNGLADLVVGYMGVPKYPGVSMTQHPQYITVRNDRGREMLSLVEGLLESTPTVS 370
Query: 342 SGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTI 401
SG R+PFV+ETVKADD AK GRGPSQPAP FVGN+IAF +NL+GPKGLEFARYSLDYHTI
Sbjct: 371 SGVRQPFVIETVKADDEAKQGRGPSQPAPTFVGNVIAFLLNLIGPKGLEFARYSLDYHTI 430
Query: 402 RNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 442
RNYLHVNRAWGK+RA++H+PSYAKKIVE Y+++G+I+ ML
Sbjct: 431 RNYLHVNRAWGKQRAEQHIPSYAKKIVEAYDKDGRIESMLQ 471
>gi|2494116|gb|AAB80625.1| Similar to Synechocystis hypothetical protein (gb|D90915)
[Arabidopsis thaliana]
Length = 433
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/428 (81%), Positives = 374/428 (87%), Gaps = 33/428 (7%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 18 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 77
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 78 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 137
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQ
Sbjct: 138 VQSDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQ 197
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTR+GLDKFLKAAS EPETVLHYEFMQDYK
Sbjct: 198 ALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYK------ 251
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
VPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYI
Sbjct: 252 ------VPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYI 305
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 376
TVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+QPAP FVGN+
Sbjct: 306 TVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNI 365
Query: 377 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKKIVEMYN+NGQ
Sbjct: 366 IAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQ 425
Query: 437 IDQMLSSK 444
ID+MLS K
Sbjct: 426 IDKMLSKK 433
>gi|326528691|dbj|BAJ97367.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 483
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/424 (80%), Positives = 373/424 (87%), Gaps = 22/424 (5%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 60 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 119
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GRG RKD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQSD
Sbjct: 120 GRG-RKDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQSD 178
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---- 217
PDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 179 PDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 238
Query: 218 -----------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 260
VDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHLDGHI
Sbjct: 239 VEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLDGHI 298
Query: 261 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 320
EEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHPQYITVRN
Sbjct: 299 EEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHPQYITVRN 358
Query: 321 ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFF 380
ERG+EMLSLV+ LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP FVGN+IAF
Sbjct: 359 ERGREMLSLVEGLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAPIFVGNIIAFL 418
Query: 381 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQM 440
+NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE YN++G+ID M
Sbjct: 419 LNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEAYNKDGRIDSM 478
Query: 441 LSSK 444
L
Sbjct: 479 LQQN 482
>gi|326525733|dbj|BAJ88913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/424 (80%), Positives = 374/424 (88%), Gaps = 22/424 (5%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 48 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 107
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GRG RKD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQSD
Sbjct: 108 GRG-RKDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQSD 166
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---- 217
PDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 167 PDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 226
Query: 218 -----------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 260
VDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHLDGHI
Sbjct: 227 VEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLDGHI 286
Query: 261 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 320
EEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHPQYITVRN
Sbjct: 287 EEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHPQYITVRN 346
Query: 321 ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFF 380
ERG+EMLSLV++LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP FVGN+IAF
Sbjct: 347 ERGREMLSLVESLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAPIFVGNIIAFL 406
Query: 381 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQM 440
+NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE YN++G+ID M
Sbjct: 407 LNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEAYNKDGRIDSM 466
Query: 441 LSSK 444
L
Sbjct: 467 LQQN 470
>gi|357144250|ref|XP_003573225.1| PREDICTED: uncharacterized protein all1601-like [Brachypodium
distachyon]
Length = 466
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/429 (78%), Positives = 375/429 (87%), Gaps = 22/429 (5%)
Query: 35 DGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIE 94
+G +REDWR++S PIPPGG YPAKD CSRCGLCDTYYIAHV ACAFLGDGMSR+E
Sbjct: 35 NGRGKKAVREDWREKSNPIPPGGVYPAKDKCSRCGLCDTYYIAHVNTACAFLGDGMSRVE 94
Query: 95 GLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
LE +VHGRGR KD++D+ Y GVH++LLY+RKT+PV+GAQWTGIVTTIA+EMLK MV+A
Sbjct: 95 DLEPIVHGRGR-KDTMDELYFGVHDQLLYSRKTQPVQGAQWTGIVTTIAVEMLKANMVDA 153
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 214
VVCVQSDP+DRL+PRPVLARTPEEV+AAKGVKPTLSPNL+TLALVEAAGVKRLLFCGVGC
Sbjct: 154 VVCVQSDPEDRLAPRPVLARTPEEVIAAKGVKPTLSPNLDTLALVEAAGVKRLLFCGVGC 213
Query: 215 QVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 253
QVQ VDNGTREGLDKFLKAAS+EPETVLHYEFMQDYKVHL
Sbjct: 214 QVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHL 273
Query: 254 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 313
KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHP
Sbjct: 274 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHP 333
Query: 314 QYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFV 373
QYITVRNERG+EMLSLV+ LLE TPT+SSG R FVMETVKADD AKMG+GP+ PAP+FV
Sbjct: 334 QYITVRNERGREMLSLVEGLLESTPTVSSGAREAFVMETVKADDAAKMGKGPANPAPRFV 393
Query: 374 GNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQ 433
GN+IAF +NL+GPKGLEF RYSLDYHTIRNYL+V RAWG RA++HMPSYAKKIVE YN+
Sbjct: 394 GNIIAFLLNLIGPKGLEFGRYSLDYHTIRNYLYVKRAWGSTRAEQHMPSYAKKIVEAYNK 453
Query: 434 NGQIDQMLS 442
+G+ID ML
Sbjct: 454 DGRIDSMLQ 462
>gi|414869973|tpg|DAA48530.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 470
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/426 (78%), Positives = 378/426 (88%), Gaps = 21/426 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 V--------------------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 257
DNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHLD
Sbjct: 222 ALRSVEKYLGLEKLYVLGTNFDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLD 281
Query: 258 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYIT
Sbjct: 282 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYIT 341
Query: 318 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 377
VRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG+++
Sbjct: 342 VRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDIL 401
Query: 378 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 437
AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I
Sbjct: 402 AFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRI 461
Query: 438 DQMLSS 443
+ M++
Sbjct: 462 EAMVTQ 467
>gi|212722724|ref|NP_001131424.1| uncharacterized protein LOC100192754 [Zea mays]
gi|194691478|gb|ACF79823.1| unknown [Zea mays]
Length = 470
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/426 (78%), Positives = 377/426 (88%), Gaps = 21/426 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 V--------------------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 257
DNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHLD
Sbjct: 222 ALRSVEKYLGLEKLYVLGTNFDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLD 281
Query: 258 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYIT
Sbjct: 282 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYIT 341
Query: 318 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 377
VRN+RG+ ML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG+++
Sbjct: 342 VRNDRGQVMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDIL 401
Query: 378 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 437
AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I
Sbjct: 402 AFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRI 461
Query: 438 DQMLSS 443
+ M++
Sbjct: 462 EAMVTQ 467
>gi|148906965|gb|ABR16627.1| unknown [Picea sitchensis]
Length = 462
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/464 (73%), Positives = 382/464 (82%), Gaps = 29/464 (6%)
Query: 2 TCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPA 61
+C +KF L + +S C SSS +S K ++LR+DWR+RS+PI PGG YPA
Sbjct: 7 SCTPFFSKFQPLFVPLSVRCSSSSGASR--------KEIQLRDDWRERSRPITPGGIYPA 58
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
KDHCS+CGLCDTYYIAHVK AC+FLGDGMS+IE LE VHGRGR++DSLDD Y GVHEE+
Sbjct: 59 KDHCSQCGLCDTYYIAHVKKACSFLGDGMSKIEVLEPRVHGRGRKEDSLDDLYFGVHEEV 118
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
YARK +P+EGAQWTGIVTTIAIEML++ V+AV+CVQSD +DR SP+P LARTPEEVLA
Sbjct: 119 NYARKIEPLEGAQWTGIVTTIAIEMLRSNKVDAVICVQSDAEDRFSPKPFLARTPEEVLA 178
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDN 220
+GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ VDN
Sbjct: 179 GRGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRTVEKYLGLEKLYVLGTNCVDN 238
Query: 221 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPS 280
GTREGLDKFLK AS P+TVLHYEFMQDYKVHLKHLDGH EEVPYFCLPA++L DVIAPS
Sbjct: 239 GTREGLDKFLKVASDSPDTVLHYEFMQDYKVHLKHLDGHTEEVPYFCLPADELTDVIAPS 298
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
CYSCFDYTNALADLVVGYMGVPKY GISMTQHPQYITVRNERG+EML + ++LLEITPT+
Sbjct: 299 CYSCFDYTNALADLVVGYMGVPKYPGISMTQHPQYITVRNERGREMLDMARHLLEITPTV 358
Query: 341 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 400
SSG RR FVMETVKADD AK +G SQP P+FVGN IAF +NL GPKGLEFARYSLDYHT
Sbjct: 359 SSGKRRSFVMETVKADDKAKTAKGNSQPVPRFVGNAIAFILNLFGPKGLEFARYSLDYHT 418
Query: 401 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
IRNYLHV R WGK+RA+KH+PSYAKKIV MYN NG+ID++L +K
Sbjct: 419 IRNYLHVYRTWGKQRAEKHIPSYAKKIVTMYNDNGEIDKLLFTK 462
>gi|218192630|gb|EEC75057.1| hypothetical protein OsI_11171 [Oryza sativa Indica Group]
Length = 503
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/493 (72%), Positives = 393/493 (79%), Gaps = 62/493 (12%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ----------------------- 159
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 160 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 211 GVGCQVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDY 249
GVGCQVQ VDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 250 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 309
KVHLKHLDGHIEEVPYFCLPA DLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SM
Sbjct: 311 KVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYPGVSM 370
Query: 310 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 369
TQHPQYITVRN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 371 TQHPQYITVRNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 430
Query: 370 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 429
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 431 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 490
Query: 430 MYNQNGQIDQMLS 442
Y+++G+I+ ML
Sbjct: 491 AYDKDGRIESMLQ 503
>gi|242079547|ref|XP_002444542.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
gi|241940892|gb|EES14037.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
Length = 478
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/427 (77%), Positives = 376/427 (88%), Gaps = 22/427 (5%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ LREDWR++SKPIPPG YPAKDHCS CGLCDTYY+AHVK ACAFLG+GMSR+E LE
Sbjct: 50 RAKALREDWRQKSKPIPPGAVYPAKDHCSHCGLCDTYYVAHVKTACAFLGEGMSRVEDLE 109
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PV+GAQWTGIVTTIA+EMLK +V+AVVC
Sbjct: 110 PQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVQGAQWTGIVTTIAVEMLKANLVDAVVC 168
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 169 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 228
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTREGLDKFLKAAS+EPETV+HYEFMQDYKVHLKHL
Sbjct: 229 ALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASNEPETVMHYEFMQDYKVHLKHL 288
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 289 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 348
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 376
TVRN+RG+EMLSLV LLE TPTISSG R+PFVMETVKADD AK+G+ PS+PAP+FVG++
Sbjct: 349 TVRNDRGREMLSLVDGLLESTPTISSGSRQPFVMETVKADDAAKLGKDPSKPAPRFVGDI 408
Query: 377 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
+AF +NLVGPKGLEFARYSLDYHTIRNYLHV R WGK+RA++H+P YAKKIVE Y+++G+
Sbjct: 409 LAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRVWGKQRAEQHIPGYAKKIVEAYDKDGR 468
Query: 437 IDQMLSS 443
I+ M++
Sbjct: 469 IEAMVTQ 475
>gi|414869974|tpg|DAA48531.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 512
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/468 (71%), Positives = 379/468 (80%), Gaps = 63/468 (13%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
VDNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHL
Sbjct: 222 ALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHL 281
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 282 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 341
Query: 317 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKM--------------- 361
TVRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+
Sbjct: 342 TVRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGTSPNHHLYGILVLS 401
Query: 362 --------------------------GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYS 395
G+GPS+PAP+FVG+++AF +NLVGPKGLEFARYS
Sbjct: 402 IGIELVVTMTIRLAYIHVNKQTNGSTGKGPSKPAPRFVGDILAFLLNLVGPKGLEFARYS 461
Query: 396 LDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 443
LDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+ M++
Sbjct: 462 LDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEAMVTQ 509
>gi|168035893|ref|XP_001770443.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678320|gb|EDQ64780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/446 (70%), Positives = 365/446 (81%), Gaps = 24/446 (5%)
Query: 17 ISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYI 76
+ T+ C S S+ + +V DWR+++KPI PG TYPAKDHCS+CGLCDTYYI
Sbjct: 1 MRTLICLVLSVSNVVVLGYATATVDSPSDWREKAKPIKPGSTYPAKDHCSQCGLCDTYYI 60
Query: 77 AHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWT 136
AHVKDACAFLGDGMSRIE LE VHGRGR +S++D + GVH+E+LYARKT+PVEGAQWT
Sbjct: 61 AHVKDACAFLGDGMSRIEVLEPKVHGRGRNPESMEDLFFGVHDEMLYARKTEPVEGAQWT 120
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GIVTTIA+EML+ MV+AV+CVQSDP+DR P PVLARTPEEVLAA+GVKPTLSPNL+TL
Sbjct: 121 GIVTTIAMEMLRKDMVDAVICVQSDPEDRFKPNPVLARTPEEVLAARGVKPTLSPNLSTL 180
Query: 197 ALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTREGLDKFLKAASS 235
A VEAAGVKRLLFCGVGCQVQ VDNG R+GLDKFLKAAS
Sbjct: 181 AFVEAAGVKRLLFCGVGCQVQALRSVEKHLGLEKLYVLGTNCVDNGPRQGLDKFLKAASD 240
Query: 236 EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 295
+P+TVLHYEFMQDYK L + VPYFCLPA+DL DVIAPSCYSCFDYTN LADLV
Sbjct: 241 DPDTVLHYEFMQDYKALYHKL---LYCVPYFCLPADDLTDVIAPSCYSCFDYTNGLADLV 297
Query: 296 VGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 355
VGYMGVPKY G+ MT+HPQYITVRN RGKEML LV+ LL++TPTISSG+R PFVMETVKA
Sbjct: 298 VGYMGVPKYPGVPMTRHPQYITVRNGRGKEMLDLVRPLLDVTPTISSGNRGPFVMETVKA 357
Query: 356 DDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKR 415
DD AK+G+ +QPAP+FVGN+IA+ +NLVGPKGLEF RYSLDYH IRNYLHV+RAWG+KR
Sbjct: 358 DDKAKLGKEKTQPAPRFVGNIIAWLLNLVGPKGLEFGRYSLDYHNIRNYLHVHRAWGQKR 417
Query: 416 ADKHMPSYAKKIVEMYNQNGQIDQML 441
AD+H+PSYAKK+V +YN+NG+ID++L
Sbjct: 418 ADQHIPSYAKKLVSLYNKNGEIDKIL 443
>gi|222628616|gb|EEE60748.1| hypothetical protein OsJ_14296 [Oryza sativa Japonica Group]
Length = 455
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/493 (63%), Positives = 347/493 (70%), Gaps = 110/493 (22%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ----------------------- 159
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 160 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 211 GVGCQVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDY 249
GVGCQVQ VDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 250 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 309
K VPYFCLPA DLVDVIAPSCY
Sbjct: 311 K------------VPYFCLPAKDLVDVIAPSCY--------------------------- 331
Query: 310 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 369
RN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 332 ---------RNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 382
Query: 370 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 429
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 383 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 442
Query: 430 MYNQNGQIDQMLS 442
Y+++G+I+ ML
Sbjct: 443 AYDKDGRIESMLQ 455
>gi|384250915|gb|EIE24393.1| hypothetical protein COCSUDRAFT_14021 [Coccomyxa subellipsoidea
C-169]
Length = 436
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/413 (66%), Positives = 318/413 (76%), Gaps = 19/413 (4%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
+ DWR ++KPI G TYPAK CS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VHG
Sbjct: 24 KADWRSKAKPIKEGSTYPAKQFCSHCGLCDTYYVAHVKDACAFLGDGMSKIESLEEQVHG 83
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R R DSLDD + GVHE+++YA T PV GAQWTGIVT IAIEML++G VEAVVCVQ+D
Sbjct: 84 RRRDLDSLDDLHFGVHEDMMYALNTPPVPGAQWTGIVTQIAIEMLESGQVEAVVCVQNDE 143
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV---------- 212
DR SP+P +AR E++L AKGVKPTLSPNLNTLA VEA VKRLLF GV
Sbjct: 144 ADRFSPKPFVARCKEDILKAKGVKPTLSPNLNTLATVEALDVKRLLFIGVQALRSVEKYL 203
Query: 213 GCQVQ-------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY 265
G + VDNG REGL+KFL AASS+P+TVLHYEFMQDY+VH+KHLDG E VPY
Sbjct: 204 GLEALYVLGTNCVDNGPREGLEKFLNAASSDPDTVLHYEFMQDYRVHIKHLDGSFEYVPY 263
Query: 266 FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 325
FCLPANDL DVIAPSCYSCFDY NALADLVVGYMGVP Y G MT HPQYITVRN RG+
Sbjct: 264 FCLPANDLTDVIAPSCYSCFDYPNALADLVVGYMGVP-YYGTDMTSHPQYITVRNARGRA 322
Query: 326 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 385
M+ VK L+I PT+++GDR PFVM+TV +DD K+G P+ PAP+FVGN IA + +G
Sbjct: 323 MMDAVKPRLKILPTMAAGDRTPFVMQTVLSDDAGKLGTAPN-PAPRFVGNAIAKVLTWLG 381
Query: 386 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 438
PKGLEF RYS+DYH IRN+++VNR G RA +H P +AK++V MYN+ G+ID
Sbjct: 382 PKGLEFGRYSIDYHYIRNWIYVNRHMGPARAQRHTPEFAKRLVAMYNEKGEID 434
>gi|255079718|ref|XP_002503439.1| predicted protein [Micromonas sp. RCC299]
gi|226518706|gb|ACO64697.1| predicted protein [Micromonas sp. RCC299]
Length = 530
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 266/424 (62%), Positives = 325/424 (76%), Gaps = 23/424 (5%)
Query: 39 SVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET 98
S + EDWR++SKPI PGG YPAK+HCS+CGLCDTYYIAHVKDACAFLGDGMSRIE LE
Sbjct: 38 SAAIAEDWREKSKPIAPGGNYPAKEHCSQCGLCDTYYIAHVKDACAFLGDGMSRIETLEP 97
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
VHGRGR + D+ LGV +E+ YA++ +PVEGAQWTGIVT+IAIEMLK+G VE VVCV
Sbjct: 98 TVHGRGRDLGN-DEMRLGVVDEVFYAKRNRPVEGAQWTGIVTSIAIEMLKSGKVEGVVCV 156
Query: 159 QSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ- 217
SDPD+ + PRP+LA T EE+L++KGVKP LSPNL+ LA VEA G+KR+LF GVGC VQ
Sbjct: 157 ASDPDNAMHPRPILATTVEEILSSKGVKPALSPNLSVLAEVEARGLKRVLFIGVGCAVQA 216
Query: 218 --------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 257
DNG +E L KFL+ AS +P TV+HYEFMQDY+VHLKH D
Sbjct: 217 LRSVEKYLGLEKLYVMGTNCTDNGRKETLSKFLENASEDPATVVHYEFMQDYQVHLKHTD 276
Query: 258 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
G E+VPYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP Y MT+HPQY+T
Sbjct: 277 GSFEKVPYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVPYYH-TDMTRHPQYVT 335
Query: 318 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 377
VRNERGKEM +++ ++TP++SSG+R+PFVM+TV +DD A +GRGP +PAP VG I
Sbjct: 336 VRNERGKEMFDMIRGDCDVTPSVSSGERKPFVMQTVISDDEATLGRGPEEPAPLPVGKAI 395
Query: 378 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 437
A+ + +GPKG EF YSLDYHTIRNYL+V R +G++RA +H+P YA+ +V+ YN G +
Sbjct: 396 AWLLEKIGPKGKEFGMYSLDYHTIRNYLYVKRTFGEERATRHVPDYARLVVDEYNVYGAV 455
Query: 438 DQML 441
D+ L
Sbjct: 456 DERL 459
>gi|302842339|ref|XP_002952713.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
gi|300262057|gb|EFJ46266.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
Length = 496
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/450 (59%), Positives = 335/450 (74%), Gaps = 31/450 (6%)
Query: 24 SSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDAC 83
S +++P+++ S L DWR+RSKPI PG +YPAK +CS CGLCDTYY+AHVKDAC
Sbjct: 46 SDGIDAATPTRELGSSSPLPADWRQRSKPISPGSSYPAKQYCSSCGLCDTYYVAHVKDAC 105
Query: 84 AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIA 143
AFLGDGMSR+E LE VHGR R + D+ + GV + YA T PVEGAQWTGIVT IA
Sbjct: 106 AFLGDGMSRVERLEERVHGRRRNANDDDELHFGVTRSMSYAVNTPPVEGAQWTGIVTQIA 165
Query: 144 IEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA--------AKGVKPTLSPNLNT 195
IEML++G VEAVVCVQSD +DR +P+PV+ART E+++ A+GVKPTLSPNLN
Sbjct: 166 IEMLRSGKVEAVVCVQSDENDRFTPKPVVARTVEDIIKVGRGLWGRARGVKPTLSPNLNV 225
Query: 196 LALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTREGLDKFLKAAS 234
LA VEA VK+LLF GVGCQVQ VDNG R GLDKFL+AAS
Sbjct: 226 LATVEALQVKKLLFIGVGCQVQALRSIEPYLGLDKLYVLGTNCVDNGPRAGLDKFLRAAS 285
Query: 235 SEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADL 294
+ P+ LHYEFMQDY+VH+KH DG E VPYFCLPA +L DVIAPSCYSCFDYTN LAD+
Sbjct: 286 TRPQEALHYEFMQDYRVHVKHTDGSFEYVPYFCLPAKELNDVIAPSCYSCFDYTNGLADM 345
Query: 295 VVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK 354
VVGYMGVP Y + M +HPQY+ VRNERG+E+L VK+ LE++PT+S GDRR VM+TV
Sbjct: 346 VVGYMGVP-YLDLDMIRHPQYLVVRNERGQELLDSVKHRLEMSPTVSMGDRRSVVMQTVA 404
Query: 355 ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK 414
+DD AK+G PAP+++GNL+A+ +NL+GPKGLEF +YS+DYH IRNYL+V+R WG K
Sbjct: 405 SDDQAKLGE-LRDPAPRWLGNLLAWLLNLIGPKGLEFGKYSIDYHYIRNYLYVHRNWGAK 463
Query: 415 RADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
RA++H+PS+ K+IV Y+++G + + L+ K
Sbjct: 464 RAEQHIPSFVKEIVRQYDKDGAVTKRLNLK 493
>gi|307102673|gb|EFN50942.1| hypothetical protein CHLNCDRAFT_55433 [Chlorella variabilis]
Length = 454
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/430 (60%), Positives = 319/430 (74%), Gaps = 32/430 (7%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR +++PIP G +YPAK+HCS CGLCDTYYIAHVK+ACAFLGDGMS+I LE HGR
Sbjct: 18 DWRHKARPIPAGSSYPAKEHCSHCGLCDTYYIAHVKEACAFLGDGMSKIGQLEEQAHGRR 77
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R + S D+ GV +++LYAR VEGAQWTGIVT IAIEML++G V+AVVCVQS DD
Sbjct: 78 RDQGSEDELRFGVTQQVLYARNAPAVEGAQWTGIVTQIAIEMLESGQVDAVVCVQSQEDD 137
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------- 217
R SP+P++AR+ E++LAA+GVKPTLSPNL+ LA VEA VKRLLF GVGCQVQ
Sbjct: 138 RFSPKPMVARSREDILAARGVKPTLSPNLSVLATVEALDVKRLLFIGVGCQVQALRSIEP 197
Query: 218 --------------VDNGTREGLDKFLKAASSEPETVLHYEFM---------QDYKVHLK 254
VDNG R+GL+KFL AASS+P+TVLHYEFM DYKVH+K
Sbjct: 198 HLQLEKLYVLGTNCVDNGPRQGLEKFLNAASSDPDTVLHYEFMQARERQAAAADYKVHIK 257
Query: 255 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 314
H DG E +PYFCLPAN+L DVIAPSCYSCFDY NA ADLV+GYMGVP Y MT H Q
Sbjct: 258 HTDGSFEYIPYFCLPANELNDVIAPSCYSCFDYPNATADLVIGYMGVP-YQNTDMTSHLQ 316
Query: 315 YITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVG 374
Y+TVRN RG+E+L V++ L + P +SSG R FV++TV ADD AK+G+GP PAP++VG
Sbjct: 317 YLTVRNPRGQELLDSVRHRLVVEPPVSSGSRGAFVLQTVLADDQAKLGKGPD-PAPRWVG 375
Query: 375 NLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQN 434
NL+A+ + VGPKGLEFA+YS+DYH IRNY+HV R WG KRA +H+P +A++IV YN
Sbjct: 376 NLLAWVLERVGPKGLEFAKYSVDYHYIRNYIHVMRHWGPKRAAQHIPDFAQRIVAEYNPK 435
Query: 435 GQIDQMLSSK 444
G + + + K
Sbjct: 436 GMVSERAALK 445
>gi|308805665|ref|XP_003080144.1| unnamed protein product [Ostreococcus tauri]
gi|116058604|emb|CAL54311.1| unnamed protein product [Ostreococcus tauri]
Length = 453
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/416 (59%), Positives = 308/416 (74%), Gaps = 21/416 (5%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K ++PI G TYPAK+HCS CGLCDT ++A V+DACAFLG GMSR+E LE VVHGRGRR
Sbjct: 34 KSARPIQNGSTYPAKEHCSECGLCDTEHVARVRDACAFLGQGMSRVETLEPVVHGRGRRA 93
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ LGV +E YA +PV+GAQWTG+VT++A ML++GMVE V+CV SDPD+ +
Sbjct: 94 SPDDEDRLGVVDETFYAAMKRPVDGAQWTGVVTSVAKRMLESGMVEGVICVASDPDEPRA 153
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
PRP+LA T EE+++A+GVKP+LSPNL+ L+ VEA G+KR+LF GVGC V
Sbjct: 154 PRPILATTVEEIVSARGVKPSLSPNLSVLSEVEARGLKRILFIGVGCAVSALRAVEPYLG 213
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
DNG E KF++ +S P TVLHYEFM DY+VH KHLDG E+VPYF
Sbjct: 214 FDKLYVMGVNCTDNGRLESFQKFIQLSSENPGTVLHYEFMPDYQVHFKHLDGTYEKVPYF 273
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
CLPANDLVDVIAPSCYSCFDY N LAD+VVGYMG M +HPQY+TVRN RG+EM
Sbjct: 274 CLPANDLVDVIAPSCYSCFDYVNGLADVVVGYMGSEYDPSKPMNEHPQYVTVRNSRGREM 333
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
+ LV++ ++++P+ SSGDRRPFVM+TV ADD AK GRGP +PAP+FVG LIA+ + +GP
Sbjct: 334 IDLVRDDMDVSPSTSSGDRRPFVMQTVVADDEAKFGRGPEKPAPRFVGKLIAWLLTKIGP 393
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 442
KG EF YSLDYHTIRNYL+VNR WG +RA +H+P YAK++V Y+ NG + L+
Sbjct: 394 KGKEFGMYSLDYHTIRNYLYVNRVWGAERAREHVPEYAKRVVREYDVNGAVSARLN 449
>gi|159482986|ref|XP_001699546.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272813|gb|EDO98609.1| predicted protein [Chlamydomonas reinhardtii]
Length = 418
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/426 (60%), Positives = 320/426 (75%), Gaps = 34/426 (7%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
L DWR+R+KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLG GMSRI+ LE VH
Sbjct: 1 LAPDWRERAKPIQPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGPGMSRIDELEERVH 60
Query: 102 GRGRRKDSLDDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ 159
GR R +S D+ + GV + YA V GAQWTGIVT IAIEML++G V+AVVCVQ
Sbjct: 61 GRRRDVNSDDELHFGVTAPGGMAYAANVPGVPGAQWTGIVTQIAIEMLQSGKVDAVVCVQ 120
Query: 160 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-- 217
SD +DR +P+PV+ART E+++ A+GVKPTLSPNLN LA VEA VK+LLF GVGCQVQ
Sbjct: 121 SDENDRFTPKPVVARTVEDIIKARGVKPTLSPNLNVLATVEALQVKKLLFIGVGCQVQAL 180
Query: 218 -------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 258
VDNG R+GLDKFLKAAS+ P+ LHYEFMQDY+
Sbjct: 181 RSIEPHLGLEKLYVLGTNCVDNGPRKGLDKFLKAASTRPDQALHYEFMQDYRWGY----- 235
Query: 259 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 318
VPYFCLPAN+L DVIAPSCYSCFDY NALAD+VVGYMGVP Y MT HPQY+ V
Sbjct: 236 ----VPYFCLPANELNDVIAPSCYSCFDYPNALADMVVGYMGVP-YLNKDMTSHPQYVVV 290
Query: 319 RNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIA 378
RN+RG E+L V++ L+ITPT+S+GDRR VM+TV +DD AKMG+ PAP+++GN++A
Sbjct: 291 RNDRGNELLDSVRHRLQITPTVSTGDRRGIVMQTVASDDEAKMGQ-LRDPAPRWLGNMLA 349
Query: 379 FFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 438
+ +NL+GPKGLEF +YS+DYH IRNYL+VNR WG KRA++H+PS+AKKIV+ Y+++G +
Sbjct: 350 WLLNLIGPKGLEFGKYSIDYHYIRNYLYVNRKWGAKRAEQHIPSFAKKIVQQYDKDGAVS 409
Query: 439 QMLSSK 444
+ +S K
Sbjct: 410 KRISLK 415
>gi|303272651|ref|XP_003055687.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463661|gb|EEH60939.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 524
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/420 (58%), Positives = 305/420 (72%), Gaps = 35/420 (8%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR+++KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VVHGR
Sbjct: 51 DWREKAKPIAPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGDGMSKIETLEPVVHGRA 110
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R S D++ LGV ++ YAR PV GAQWTG+VT+IAIEML +G V+ V+CV SD +
Sbjct: 111 RDLSS-DESRLGVARDVFYARMEAPVRGAQWTGVVTSIAIEMLASGKVDGVICVASDDAN 169
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV------ 218
+ P+P+LA T EE+L+++GVKP LSPNL+ LA VEA G+K+LLF GVGC VQ
Sbjct: 170 PMLPKPILATTAEEILSSRGVKPALSPNLSVLAEVEARGIKKLLFVGVGCAVQALRSVEK 229
Query: 219 ---------------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
DNG +E L KFL AS +P+TV+HYEFMQDY ++V
Sbjct: 230 YLGLEALYVVGTNCTDNGRKETLSKFLDNASEDPKTVIHYEFMQDY-----------QKV 278
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
PYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP + + MT HPQY+TVRNE+G
Sbjct: 279 PYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVP-WMNVDMTAHPQYVTVRNEKG 337
Query: 324 KEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 383
EM L++ +TP++SSGDRRPFVM+TV +DD A +GRGP +PAP VG IA+ +
Sbjct: 338 AEMFDLIRERAVVTPSVSSGDRRPFVMQTVISDDEATLGRGPEEPAPIAVGKAIAWLLEK 397
Query: 384 VGPKGLEFARYSLDYHTIRNYLHVNRAW-GKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 442
+GPKG EF YSLDYHTIRNYLHV R + G+ RA H+P YA+ +V+ YN+NG ID L+
Sbjct: 398 IGPKGKEFGMYSLDYHTIRNYLHVKRRFGGEARAAAHVPKYARLVVDEYNENGAIDARLA 457
>gi|414869979|tpg|DAA48536.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 310
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/304 (79%), Positives = 270/304 (88%), Gaps = 21/304 (6%)
Query: 161 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ--- 217
DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 4 DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 63
Query: 218 ------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 259
VDNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHLDGH
Sbjct: 64 SVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLDGH 123
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 319
IEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVR
Sbjct: 124 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYITVR 183
Query: 320 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 379
N+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG+++AF
Sbjct: 184 NDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDILAF 243
Query: 380 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 439
+NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+
Sbjct: 244 LLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEA 303
Query: 440 MLSS 443
M++
Sbjct: 304 MVTQ 307
>gi|145342511|ref|XP_001416225.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576450|gb|ABO94518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 428
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/416 (58%), Positives = 299/416 (71%), Gaps = 34/416 (8%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
++PI PG YPAK+HCS CGLCDT ++A VK+ACAFLG G SRIE LE VVHGR R
Sbjct: 26 ARPIAPGSAYPAKEHCSECGLCDTAHVARVKEACAFLGPGQSRIETLEPVVHGRARSAAP 85
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D++ LGV E Y PV+GAQWTGIVT++A+ L++G VE VVCV S DD +PR
Sbjct: 86 SDESRLGVALETFYGAMRTPVDGAQWTGIVTSVALAALRSGAVEGVVCVASREDDSRAPR 145
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV----------- 218
P+LA T EE+L+A+GVKP+LSPNL+ LA VEA G+KR+LF GVGC V
Sbjct: 146 PILATTEEEILSARGVKPSLSPNLSVLAEVEARGLKRVLFIGVGCAVSALRAVEPHLGLD 205
Query: 219 ----------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 268
DNG EG +KF+ AAS +P+TV+HYEFMQDY +VPYFCL
Sbjct: 206 ALYVVGTNCTDNGRWEGFNKFIDAASDDPDTVMHYEFMQDY------------QVPYFCL 253
Query: 269 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
PA DL DVIAPSCYSCFDY N LAD+VVGYMGVP Y M +HPQY+TVRNERG+EM+
Sbjct: 254 PAKDLTDVIAPSCYSCFDYVNGLADVVVGYMGVP-YMDKPMDRHPQYVTVRNERGREMID 312
Query: 329 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 388
L++N +EITP+ SSGDRRPFVM+TV ADD AK+GRGP +PAP+ VG L+A+ + +GPKG
Sbjct: 313 LIRNDMEITPSTSSGDRRPFVMQTVVADDEAKLGRGPDKPAPRVVGKLLAWLLTKIGPKG 372
Query: 389 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
EF YSLDYHTIRNY++VNRAWG KRA++H+P YAK++V Y+ +G I L K
Sbjct: 373 KEFGMYSLDYHTIRNYMYVNRAWGAKRAEEHVPEYAKRVVREYDVDGAISARLRLK 428
>gi|115457714|ref|NP_001052457.1| Os04g0320100 [Oryza sativa Japonica Group]
gi|113564028|dbj|BAF14371.1| Os04g0320100 [Oryza sativa Japonica Group]
Length = 327
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/311 (75%), Positives = 254/311 (81%), Gaps = 30/311 (9%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQSDPDDRL+P PVLARTP+EV+AA
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQSDPDDRLAPMPVLARTPDEVIAA 190
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNG 221
KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ VDNG
Sbjct: 191 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNG 250
Query: 222 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 281
TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA DLVDVIAPSC
Sbjct: 251 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSC 310
Query: 282 YSCFDYTNALA 292
YSCFDYTN LA
Sbjct: 311 YSCFDYTNGLA 321
>gi|412986215|emb|CCO17415.1| predicted protein [Bathycoccus prasinos]
Length = 480
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/431 (54%), Positives = 293/431 (67%), Gaps = 38/431 (8%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++ +PI PG +YPAK+HCS CGLCDT I++VKDACAFLG GMSRIE LE VHG+ RR
Sbjct: 49 RKGQPIKPGQSYPAKEHCSNCGLCDTSLISYVKDACAFLGPGMSRIEKLEEKVHGK-RRN 107
Query: 108 DSLDDTYLGV-------------HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
D+ LGV + + YA+K +P+E AQWTGIVT++A+EML+T V+
Sbjct: 108 TETDELRLGVLLNSDTKDNTNNSSQSIFYAKKKQPMEKAQWTGIVTSVALEMLRTKTVDC 167
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVG 213
VV V S D +P P L T E++LA +GVKP+LSPNL A +E +K +L+ GVG
Sbjct: 168 VVAVGSGEADARNPEPKLCFTEEDILACRGVKPSLSPNLKVFAEIETNPEIKNVLYIGVG 227
Query: 214 CQVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 252
C V DNG +G KF+ A+ +P+ VLHYEFM DYKVH
Sbjct: 228 CSVVALREVEQYLGLDNLYVLGTNCADNGRTDGFYKFVNNATDKPDEVLHYEFMPDYKVH 287
Query: 253 LKHLDGHIEEVPYFCLPANDLVD-VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 311
LK DG E++PYF LPA +L VIA SC SCFDY N LADLVVGYMGV I M
Sbjct: 288 LKMRDGSYEKIPYFSLPAKELSSGVIAESCKSCFDYVNGLADLVVGYMGVDYDESIPMNL 347
Query: 312 HPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPK 371
HPQY+TVRNERG++M+ L+KN L+ITP+ + GDR+PFV++TV +DD A +GRGP + AP+
Sbjct: 348 HPQYVTVRNERGQKMVDLIKNDLQITPSTTRGDRKPFVLQTVISDDEAYLGRGPEKGAPR 407
Query: 372 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
FVGNLIA+ +N VGPKG EF YSLDYHTIRNYL+VNR +GK+RA +H+PSYA KIVE Y
Sbjct: 408 FVGNLIAWVLNKVGPKGKEFGMYSLDYHTIRNYLYVNRIYGKERAKEHIPSYAMKIVEEY 467
Query: 432 N-QNGQIDQML 441
+NG I + L
Sbjct: 468 EGKNGDISKRL 478
>gi|434397144|ref|YP_007131148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
gi|428268241|gb|AFZ34182.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
Length = 398
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/406 (51%), Positives = 264/406 (65%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSLRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH+E++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 65 DHEDDWYFGVHQEMMAARKKQPIAGAQWTGIVSTIACEMLTRGLVEGVVCVQNTEEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PV+A TPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PKPVIATTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +REGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNQTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P +S GDR+ V +++ A D A P + ++ I +GP
Sbjct: 297 LELVQDQLDTEPVMSQGDRKQAVQQSIPAYDKAVT-------LPMWAAKMMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R +K D H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRHHPEK-LDAHVPEYAKRIVGQYQ 394
>gi|218437110|ref|YP_002375439.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7424]
gi|218169838|gb|ACK68571.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7424]
Length = 397
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/406 (51%), Positives = 264/406 (65%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKAIKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ P+DR
Sbjct: 65 DRQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LA TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPILATTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR+GL KFL+ S P+T++HYEFMQD++VH KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRDGLQKFLETTSKSPDTIVHYEFMQDFRVHFKHEDGSIETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWLVVRNDTGREM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ +E +SSGDRR V +++ A D P + L+ I +GP
Sbjct: 297 LDLVRDQIETQGVMSSGDRRQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQYK 394
>gi|22299388|ref|NP_682635.1| hypothetical protein tll1845 [Thermosynechococcus elongatus BP-1]
gi|22295571|dbj|BAC09397.1| tll1845 [Thermosynechococcus elongatus BP-1]
Length = 398
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/409 (51%), Positives = 265/409 (64%), Gaps = 40/409 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + PG PAK CS CGLCDTYYI +VK+ACAFL + E LE HGR R D
Sbjct: 9 KARALKPGSPRPAKTLCSECGLCDTYYIHYVKEACAFLN---QQFETLEQQSHGRARDLD 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAI +L++G VE VVCVQ+ DR +P
Sbjct: 66 NWDECYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIALLESGRVEGVVCVQNSQSDRFTP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+PV+ART EE+LAA+ KPTLSPNL+ L VE AG+KRLL GVGCQ+Q
Sbjct: 126 KPVIARTREEILAARVNKPTLSPNLSVLEQVEQAGLKRLLVIGVGCQIQALRAVQDKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVIYYEFMQDFRVHFKHSDGSTETVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N LADLVVGYMG P Q++ VRNERG+EML
Sbjct: 246 LKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPLGW--------QWLVVRNERGQEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV++ LEI P S+GDR V +++ A D P + L+ I +GPK
Sbjct: 298 DLVRDQLEIQPVTSAGDRHAAVQQSIPAYDKGVT-------LPMWAAKLVGLVIERIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
GLE+AR+S+D H RNYL+V R + +K A H+P++AKKIV+ Y Q
Sbjct: 351 GLEYARFSIDSHFTRNYLYVRRNYPQKLA-AHVPAFAKKIVDQYQLPAQ 398
>gi|113474585|ref|YP_720646.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Trichodesmium erythraeum IMS101]
gi|110165633|gb|ABG50173.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Trichodesmium erythraeum IMS101]
Length = 401
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/405 (51%), Positives = 264/405 (65%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL + E LE HGR R
Sbjct: 12 KKAKALRPGARRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFENLEMQTHGRIRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++TY GV+++++ +RK +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 69 EDENETYFGVYQDMIASRKKQPIEGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEEVLAAK KPTLSPNL+ L +E +G+K++L GVGCQ+Q
Sbjct: 129 PMPVIARTPEEVLAAKVNKPTLSPNLSVLEKIEKSGMKKILAIGVGCQIQALRAVEKKLD 188
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGTVEKVPFF 248
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L L D+ APSC SCFDY N LADLVVGYMG T Q+ITVRNE GK+M
Sbjct: 249 GLNTKKLKDIFAPSCLSCFDYVNGLADLVVGYMGA--------TFGWQWITVRNETGKQM 300
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV N LE P +S GDR V +++ A D A P + L+ I +GP
Sbjct: 301 LDLVMNQLETQPLMSQGDRHQAVQQSIPAYDQAVT-------LPMWAAKLMGVVIEKIGP 353
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+ R+S+D H RNYL+V R + KK D H+P +AKKIVE Y
Sbjct: 354 KGLEYGRFSIDSHFTRNYLYVKRNYPKK-LDAHVPEFAKKIVEQY 397
>gi|307151243|ref|YP_003886627.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981471|gb|ADN13352.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7822]
Length = 397
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/406 (51%), Positives = 262/406 (64%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQ---QVAELEAAAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML GMVE VVCVQ+ +DR
Sbjct: 65 ESQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGMVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LA TPE++LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPILATTPEQILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +REGL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGREM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ +E +SSGDRR V ++ A D P + L+ I +GP
Sbjct: 297 LDLVRDQIETQGVMSSGDRRQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL V R + +K A H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHYTRNYLFVKRNYPEKLA-AHVPEYAKRIVGQYK 394
>gi|428202925|ref|YP_007081514.1| coenzyme F420-reducing hydrogenase subunit beta [Pleurocapsa sp.
PCC 7327]
gi|427980357|gb|AFY77957.1| coenzyme F420-reducing hydrogenase, beta subunit [Pleurocapsa sp.
PCC 7327]
Length = 397
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKARALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEAEAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+EGAQWTGIV+TIA EML G+VE VVC+Q+ +DR
Sbjct: 65 DNQDDWYFGVHQDMMAARKKQPIEGAQWTGIVSTIACEMLNRGIVEGVVCIQNTTEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PVLA+TPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PKPVLAKTPEEVLAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRTVEKELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S P+TV+HYEFMQD+KVH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVHYEFMQDFKVHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRNE+G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNEKGREM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L L + L+ P +S GDR+ V +++ A D P + L+ I +GP
Sbjct: 297 LELAREQLDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LESHLPEFAKRIVGQY 393
>gi|443478994|ref|ZP_21068668.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
gi|443015623|gb|ELS30495.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
Length = 398
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/406 (50%), Positives = 267/406 (65%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+K + PAK+ CS CGLCDT+YI +VKDACAF+ I+ LET HGR R
Sbjct: 8 RRAKGLADTQRRPAKELCSECGLCDTHYIHYVKDACAFI---TQHIDELETQSHGRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ + Y GVH+E++ ARKT+P+EGAQWTGIV+++AI ML+ G+VE V+CVQS DR +
Sbjct: 65 DNEQELYFGVHQEMVAARKTEPIEGAQWTGIVSSLAIAMLERGLVEGVICVQSSTSDRFT 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PV+AR EE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PQPVIARNREEILAARVNKPTLSPNLSVLEQIEQSGMKRLLAIGVGCQIQALRTVESKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
DN TR GL KFL S PETV+HYEFMQD+ VH KH DG E+VP+F
Sbjct: 185 LEKLYVLGTPCTDNVTRSGLQKFLDTTSRSPETVVHYEFMQDFNVHFKHSDGSTEQVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC +CFDYTNALAD+VVGYMG T Q+I VRNE GKEM
Sbjct: 245 GLNTKELKDVFAPSCMTCFDYTNALADIVVGYMGA--------TFGWQWIVVRNETGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L L+K+ L++ P IS GDRR V + + A DNA P ++ +I+F +N VGP
Sbjct: 297 LELIKDQLQVQPVISQGDRRAAVQQGISAYDNA-------MTLPIWLAWIISFVVNKVGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+ R+S+D H +RN+L+V R + KK + H+P +AK+IV Y
Sbjct: 350 KGLEYGRFSIDSHFVRNFLYVRRNYPKK-LEAHVPEFAKRIVAHYQ 394
>gi|354566184|ref|ZP_08985357.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
gi|353546692|gb|EHC16140.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
Length = 399
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 262/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +++ LE H R R
Sbjct: 10 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQVDELEAQTHTRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIAIEML GMVE VVCVQ+ +DR
Sbjct: 67 DNADELYFGVHQSMMAARKQQPIPGAQWTGIVSTIAIEMLNRGMVEGVVCVQNTKEDRFG 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 127 PMPVIARTPEEILAARVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQALRTVEKQLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRNERG+EM
Sbjct: 247 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNERGREM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ LE P +S GDR V +++ A D P + L+ I +GP
Sbjct: 299 LELVKDQLETQPVMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQY 395
>gi|414079287|ref|YP_007000711.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Anabaena sp.
90]
gi|413972566|gb|AFW96654.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Anabaena sp.
90]
Length = 397
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 264/405 (65%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R R
Sbjct: 8 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRPRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 EDENELYFGVHQEMMSARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPIIARTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVSYEFMQDFRVHFKHEDGSEETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDY N+LAD+VVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAP--------YQWQWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ L P S G+R+P V +++ A D A P + L+ I+ +GP
Sbjct: 297 LELVKDQLHTQPVTSQGNRKPAVQQSIPAYDQAVT-------LPMWAAKLMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQY 393
>gi|440684233|ref|YP_007159028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
gi|428681352|gb|AFZ60118.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
Length = 397
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 267/409 (65%), Gaps = 42/409 (10%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
D K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R
Sbjct: 5 DSHKKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRP 61
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +D
Sbjct: 62 RNLKDENELYFGVHQEMMSARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKED 121
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------- 217
R P P++ARTP E+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 122 RFQPMPIIARTPAEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEK 181
Query: 218 --------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
VDN TR GL KFL+ S PETV+ YEFMQD++VH KH DG E V
Sbjct: 182 KLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVSYEFMQDFRVHFKHEDGSEETV 241
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQHPQYITVRNER 322
P+F L N L D+ APSC SCFDY N+LAD+VVGYMG P K+ Q+I VRN+
Sbjct: 242 PFFGLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAPFKW---------QWIVVRNDT 292
Query: 323 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 382
GKEML LVK+ ++ P +S GDR+P V +++ A D A P + L+ I+
Sbjct: 293 GKEMLELVKDQIDTQPVMSKGDRKPAVQQSIPAYDQAVT-------LPMWAAKLMGVVID 345
Query: 383 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+GPKGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 346 KIGPKGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQY 393
>gi|427731855|ref|YP_007078092.1| coenzyme F420-reducing hydrogenase subunit beta [Nostoc sp. PCC
7524]
gi|427367774|gb|AFY50495.1| coenzyme F420-reducing hydrogenase, beta subunit [Nostoc sp. PCC
7524]
Length = 397
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 266/405 (65%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKAGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQTHTRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDIFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ L+ P +S G+R+ V + + A D P +V L+ I+ +GP
Sbjct: 297 LDLVKDQLDTQPVMSEGNRKEAVQQGIPAYDKGVT-------LPMWVAKLMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL V R +G+K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNYGEK-LEAHVPEFAKRIVGQY 393
>gi|332710426|ref|ZP_08430373.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
gi|332350757|gb|EGJ30350.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
Length = 401
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 264/405 (65%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLETKAHGRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GV++++L A+K KP+EGAQWTGIV+TIA+EMLK G VE VVCVQ+ +DR
Sbjct: 69 DHPDDWYFGVNQKMLTAKKIKPIEGAQWTGIVSTIAMEMLKQGKVEGVVCVQNTEEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 129 PMPIIARTPEEVLAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVQNELG 188
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN REGL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 189 LEKLYVLGTPCVDNVNREGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 248
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV A SC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 249 GLKTNQLKDVFASSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNDIGQEM 300
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ LE P +S GDR+ V +++ A D P + ++ I +GP
Sbjct: 301 LDLVQDQLETQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 353
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL++ R +K + H+P YAK+IVE Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYLKRNHPQK-LEAHVPEYAKRIVEQY 397
>gi|443325346|ref|ZP_21054045.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
gi|442795030|gb|ELS04418.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
Length = 397
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/406 (50%), Positives = 265/406 (65%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKTGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAALEEQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D +D Y GVH+E++ ARK +P+EGAQWTGIV+++A ML+ G+VE VVCVQ+ +DR
Sbjct: 65 DQENDIYFGVHQEMMAARKKEPIEGAQWTGIVSSLACTMLRRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PFPIIARTPEEVLAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEAELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +REGL KFL S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHQDGSVEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
LSL+++ ++ P +S GDR+ V +++ A D P + ++ I +GP
Sbjct: 297 LSLIQDQIDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL++ R +K AD H+P YA+KIVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPDYARKIVEQYE 394
>gi|209524048|ref|ZP_03272599.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|376004211|ref|ZP_09781958.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
gi|209495423|gb|EDZ95727.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|375327417|emb|CCE17711.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
Length = 400
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 128 PMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L L+++ L+ P S GDRR V +++ A D A P + ++ I +GP
Sbjct: 300 LDLIQDQLDTQPVSSQGDRRAAVQQSIPAYDKAVT-------IPMWAAKMMGVVIERIGP 352
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 396
>gi|172039575|ref|YP_001806076.1| hypothetical protein cce_4662 [Cyanothece sp. ATCC 51142]
gi|354552165|ref|ZP_08971473.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
gi|171701029|gb|ACB54010.1| unknown [Cyanothece sp. ATCC 51142]
gi|353555487|gb|EHC24875.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
Length = 398
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 262/405 (64%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ ARK P+EGAQWTGIV+TIA EML+ G+VE VVCVQ+ +DR P
Sbjct: 66 DENDCYFGVHQEMMAARKKDPIEGAQWTGIVSTIACEMLEKGLVEGVVCVQNTKEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+Q
Sbjct: 126 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TREGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 186 EKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
SLV++ + P IS GDR+ V +++ A D P + L+ I VGPK
Sbjct: 298 SLVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKVGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL+V R +K D H+P YAKKIV Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPDYAKKIVSQYQ 394
>gi|428303898|ref|YP_007140723.1| coenzyme F420 hydrogenase [Crinalium epipsammum PCC 9333]
gi|428245433|gb|AFZ11213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Crinalium epipsammum PCC 9333]
Length = 401
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE HGR R
Sbjct: 8 QKAKALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQITELEEETHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV+++++ ARKT+P+EGAQWTGIV++IAIEML +GMVE VVCVQ+ +DR
Sbjct: 65 DNPDDWYFGVNQDMMAARKTEPIEGAQWTGIVSSIAIEMLNSGMVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN R GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSVEMVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ LE P S GDR+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVKDQLETQPVTSKGDRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNY+++ R +K D H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYIYLKRNHPEK-LDAHVPEYAKRIVGQY 393
>gi|428775162|ref|YP_007166949.1| coenzyme F420 hydrogenase [Halothece sp. PCC 7418]
gi|428689441|gb|AFZ42735.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halothece sp. PCC 7418]
Length = 398
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/406 (51%), Positives = 263/406 (64%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK CS CGLCDTYYI +VK+ACAFL + +I LE HG+ R
Sbjct: 8 RKAKALKAGSPRPAKALCSECGLCDTYYIHYVKEACAFLHE---QIADLEAQAHGQSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ DD Y GVH+E++ ARK +P+EGAQWTGIV+ IA EML+ G VE VVCVQ+ P+DR
Sbjct: 65 EKEDDLYFGVHQEMMAARKKEPIEGAQWTGIVSAIACEMLQQGKVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+Q
Sbjct: 125 PMPIIARTPEEVLAARVNKPTLSPNLSILEEVEQSGFKRLLVIGVGCQIQALRAVQDKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P G Q+I VRN+ GKEM
Sbjct: 245 GLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAP--FGY------QWIVVRNDIGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ LE S G+R+ V +++ A D P + L+ I VGP
Sbjct: 297 LDLVQDQLETQAVSSKGNRKAAVQQSIPAYDQGVT-------LPMWAAKLMGVVIEQVGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LDDHVPEYAKRIVEQYE 394
>gi|428223919|ref|YP_007108016.1| coenzyme F420 hydrogenase [Geitlerinema sp. PCC 7407]
gi|427983820|gb|AFY64964.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Geitlerinema sp. PCC 7407]
Length = 398
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/406 (50%), Positives = 263/406 (64%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKAKALKSSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ DD Y GVH+ ++ ARK +P+EGAQWTGIV+++AIEML G VE VVCVQ+ DR
Sbjct: 65 EQWDDCYFGVHQTMMAARKQQPIEGAQWTGIVSSLAIEMLNRGWVEGVVCVQNTESDRFG 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PV+ARTPEE+LAA+ KPTLSPNL+ L LVE +G+K+LL GVGCQ+Q
Sbjct: 125 PQPVIARTPEEILAARVNKPTLSPNLSVLELVEQSGLKKLLVIGVGCQIQALRAVQDKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R+GL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSRDGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 245 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV + LE P +S GDRR V +++ A + P + L+ I +GP
Sbjct: 297 LDLVMDQLETQPVMSKGDRRAAVQQSIPAYEKGVT-------LPMWAAQLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R +K AD H+P YA++IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVQRNHPEKLAD-HVPDYAQRIVGQYQ 394
>gi|409991447|ref|ZP_11274708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
gi|291566576|dbj|BAI88848.1| 3,8-divinyl protochlorophyllide/chlorophyllide reductase
[Arthrospira platensis NIES-39]
gi|409937698|gb|EKN79101.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
Length = 400
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 262/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PVLARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 128 PMPVLARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L L+++ L+ P S GDR V +++ A D A P + ++ I +GP
Sbjct: 300 LDLIQDQLDTQPVSSKGDRHQAVQQSIPAYDKAVT-------IPMWAAKMMGVVIERIGP 352
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LDNHVPDFAKRIVAQY 396
>gi|428206145|ref|YP_007090498.1| coenzyme F420 hydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428008066|gb|AFY86629.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 398
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL + + LET H R R
Sbjct: 9 KKAKALKSGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFDQLETQTHDRSRNL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+ + ARK +P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 66 DNPDELYFGVHQSMTAARKKEPIPGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 185
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHEDGSVETVPFF 245
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG T Q+I VRN+RG+EM
Sbjct: 246 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGA--------TFGWQWIVVRNDRGREM 297
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ LE+ P IS GDR V +++ A D A P + L+ I +GP
Sbjct: 298 LDLVQDKLELQPVISQGDRHQAVQQSIPAYDKAVT-------LPMWAAKLMGVVIERIGP 350
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 351 KGLEYARFSIDSHFTRNYLYVKRNYLEK-LEAHVPEFAKRIVGQY 394
>gi|218246210|ref|YP_002371581.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8801]
gi|257059259|ref|YP_003137147.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8802]
gi|218166688|gb|ACK65425.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8801]
gi|256589425|gb|ACV00312.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8802]
Length = 401
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 261/405 (64%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +S LE + HGR R D
Sbjct: 12 KAKGLKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQQISE---LEEIAHGRSRNLD 68
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GV++++ ARK +P+EGAQWTGIV+ IA EML G+VE VVCVQ+ P+DR P
Sbjct: 69 DENDWYFGVYQQMTAARKKQPIEGAQWTGIVSAIACEMLTQGLVEGVVCVQNTPEDRFQP 128
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
P++A+T EE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 129 MPIIAKTTEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKKLGL 188
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TREGL FL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 189 EKLYILGTPCVDNVTREGLQTFLQTTSKSPETVIHYEFMQDFRVHFKHEDGSIEKVPFFG 248
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE G+EML
Sbjct: 249 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGREML 300
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
+LV+ ++ P IS GDR+ V +++ A D P + L+ I +GPK
Sbjct: 301 ALVEEQIDTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPK 353
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL++ R +K AD H+P YAK+IV Y
Sbjct: 354 GLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPEYAKRIVNQYQ 397
>gi|282898594|ref|ZP_06306582.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
gi|281196462|gb|EFA71371.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
Length = 401
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 265/407 (65%), Gaps = 42/407 (10%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNRGLVEGVVCVQNSQEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+Q
Sbjct: 127 PMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQALRAVEKQLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPGTVVSYEFMQDFRVHFKHEDGSEEKVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 325
L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+I VRN+ GK+
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQWIVVRNDTGKQ 297
Query: 326 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 385
ML LVK LEI P +S G+R+P V + +KA D+A P +V L+ I+ +G
Sbjct: 298 MLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQLMGIVIDRIG 350
Query: 386 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
PKGLE+ ++S+D H RNYL+V R +K + H+P +AK+IV YN
Sbjct: 351 PKGLEYGKFSIDSHFARNYLYVKRHHPQK-LEAHVPEFAKRIVAQYN 396
>gi|428314173|ref|YP_007125150.1| coenzyme F420-reducing hydrogenase subunit beta [Microcoleus sp.
PCC 7113]
gi|428255785|gb|AFZ21744.1| coenzyme F420-reducing hydrogenase, beta subunit [Microcoleus sp.
PCC 7113]
Length = 402
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/393 (52%), Positives = 257/393 (65%), Gaps = 40/393 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R D+ DD Y GV++
Sbjct: 24 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEEEAHGRSRHLDNPDDWYFGVNQ 80
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
++ ARKT+P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR P P++ARTPEE+
Sbjct: 81 NMMAARKTEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQPMPIIARTPEEI 140
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------V 218
LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q V
Sbjct: 141 LAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLGLEKLYVLGTPCV 200
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN TR+GL KFL S PETV+HYEFMQD++VH KH DG E VP+F L N L DV A
Sbjct: 201 DNVTRDGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFFGLKTNQLKDVFA 260
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 338
PSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EML LV+N LE P
Sbjct: 261 PSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEMLDLVQNQLETQP 312
Query: 339 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 398
+S GDRR V +++ A D P + L+ I +GP+GLE+AR+S+D
Sbjct: 313 VMSKGDRRNAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGPQGLEYARFSIDS 365
Query: 399 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 366 HFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQY 397
>gi|428780667|ref|YP_007172453.1| coenzyme F420-reducing hydrogenase subunit beta [Dactylococcopsis
salina PCC 8305]
gi|428694946|gb|AFZ51096.1| coenzyme F420-reducing hydrogenase, beta subunit [Dactylococcopsis
salina PCC 8305]
Length = 398
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 261/405 (64%), Gaps = 42/405 (10%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK CS CGLCDT+YI +VK+ACAFL + +I LE HG+ R
Sbjct: 9 KAKGLKPNSPRPAKALCSECGLCDTHYIHYVKEACAFLNE---QIAALEAEAHGKSRDLT 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
DD Y GVH+E++ AR +P+EGAQWTGIV++IA EML G VE VVCVQ+ PDDR P
Sbjct: 66 QEDDLYFGVHQEMMAARNKEPIEGAQWTGIVSSIACEMLTQGKVEGVVCVQNHPDDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+Q
Sbjct: 126 MPIIARTPEEVLAARVNKPTLSPNLSILEQVEQSGFKRLLAIGVGCQIQALRSVQDKIGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 186 EKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQHPQYITVRNERGKEM 326
L L DV APSC SCFDY N+LADLVVGYMG P +Y Q++ VRN+ GKEM
Sbjct: 246 LNTKKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFQY---------QWLVVRNDIGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L+LV + LE P S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LNLVADQLETQPVSSQGNRKAAVQQSIPAYDQGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLED-HVPEFAKRIVEQY 393
>gi|427736999|ref|YP_007056543.1| coenzyme F420-reducing hydrogenase subunit beta [Rivularia sp. PCC
7116]
gi|427372040|gb|AFY55996.1| coenzyme F420-reducing hydrogenase, beta subunit [Rivularia sp. PCC
7116]
Length = 397
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 261/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYY+ +VK+ACAFL +I LE H R R
Sbjct: 8 KKAKALKPGSPRPAKELCSECGLCDTYYVHYVKEACAFLN---QQIAELEEQSHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV +E++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNADELYFGVQQEMMAARKKEPIPGAQWTGIVSSIAIEMLNRGIVEGVVCVQNTQEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEEVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEVLAAKVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I VRNERGKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWIVVRNERGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ +++ +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVKDQIDVQEVMSQGNRQAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+ R +K D H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYTKRNHPEK-LDNHVPEFAKRIVEQY 393
>gi|126655028|ref|ZP_01726467.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
gi|126622507|gb|EAZ93212.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
Length = 398
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+ +DR P
Sbjct: 66 DENDCYFGVHQEMMAARKKEPIEGAQWTGIVSSIACEMLDKGIVEGVVCVQNTKEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PV+ART EEVLAA+ KPTLSPNL+ L ++ + +KRLL GVGCQ+Q
Sbjct: 126 MPVIARTSEEVLAARVNKPTLSPNLSILEQIKESNLKRLLVIGVGCQIQALRTVEKELGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TREGL KFL+ S P+TV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 186 KKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHEDGSIEKVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRN++GKEM
Sbjct: 246 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNDKGKEMF 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
+LV++ + P IS GDR+ V +++ A D P + L+ I VGPK
Sbjct: 298 ALVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERVGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL+V R +K D H+P+YAKKIV Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPNYAKKIVSQYQ 394
>gi|427717858|ref|YP_007065852.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 7507]
gi|427350294|gb|AFY33018.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 7507]
Length = 402
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK ACAF+ +I LET H R R
Sbjct: 12 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKSACAFIN---QQIGELETQTHTRPRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 69 DNPDELYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGIVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 129 PMPVIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 188
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 248
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 249 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 300
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ ++ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 301 LDLVKDQIDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 353
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +G+K + H+P +AK+IV Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVKRNYGEK-LEAHVPEFAKRIVGQY 397
>gi|427711257|ref|YP_007059881.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 6312]
gi|427375386|gb|AFY59338.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 6312]
Length = 404
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 260/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PAK+ CS CGLCDTYYI +VK+ACAF+ + + LET HGR R
Sbjct: 14 KKAKAIAANSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQFDTLETQTHGRSRDL 70
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+E++ ARKT P+ GAQWTGIV++IAI ML G VE VVCVQ+ P+DR
Sbjct: 71 DNWDECYFGVHQEMITARKTDPIPGAQWTGIVSSIAIAMLNQGWVEGVVCVQNTPEDRFQ 130
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
PRP++ARTP E+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 131 PRPIIARTPAEILAARVNKPTLSPNLSVLEEIEKSGLKRLLVIGVGCQIQALRAVEDKLG 190
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S P+TV++YEFMQD++VH KH DG E VP+F
Sbjct: 191 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVIYYEFMQDFRVHFKHEDGSTETVPFF 250
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N LADLVVGYMG P Q+ITVRN+ G+EM
Sbjct: 251 GLNTKELKDVFAPSCMSCFDYVNGLADLVVGYMGAPF--------GWQWITVRNQTGREM 302
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
LSLV++ LE P IS G+R+ V +++ A D P + L+ I VGP
Sbjct: 303 LSLVQDQLETQPMISQGNRQAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKVGP 355
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+ R + K A H+P +AKKIV+ Y
Sbjct: 356 KGLEYARFSIDSHFTRNYLYTLRNYPSKLA-AHVPEFAKKIVDQY 399
>gi|427706065|ref|YP_007048442.1| coenzyme F420 hydrogenase [Nostoc sp. PCC 7107]
gi|427358570|gb|AFY41292.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc sp. PCC 7107]
Length = 397
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 265/405 (65%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIDTLEAQAHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPEELYFGVHQDMMAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRIHFKHSDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ ++ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVKDQIDTQPVMSQGNRQEAVQQGIPAYDKGVT-------LPMWVAKMMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNHHEK-LEAHVPEFAKRIVGQY 393
>gi|254412391|ref|ZP_05026165.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180701|gb|EDX75691.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/398 (52%), Positives = 258/398 (64%), Gaps = 40/398 (10%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R D+ DD Y
Sbjct: 32 PGTIRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIPELETQTHGRSRNLDNPDDWY 88
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
GV++ ++ ARK +P+EGAQWTGIV+TIAIEML +G VE VVCVQ+ +DR P P++AR
Sbjct: 89 FGVNQNMMAARKLQPIEGAQWTGIVSTIAIEMLTSGKVEGVVCVQNTKEDRFQPMPIIAR 148
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------------- 217
TPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 149 TPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELGLEKLYVL 208
Query: 218 ----VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 273
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG IE+VP+F L +L
Sbjct: 209 GTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFQVHFKHEDGSIEKVPFFGLNTKEL 268
Query: 274 VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNL 333
DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EML LV+N
Sbjct: 269 KDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEMLDLVQNQ 320
Query: 334 LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 393
LE S GDR V +++ A D P + L+ I +GPKGLE+AR
Sbjct: 321 LETQSVTSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPKGLEYAR 373
Query: 394 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+S+D H RNYL+V R +K A H+P +AK+IV Y
Sbjct: 374 FSIDSHFTRNYLYVKRHHPEKLA-AHIPEFAKRIVGQY 410
>gi|282898451|ref|ZP_06306441.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
gi|281196617|gb|EFA71523.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
Length = 401
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/410 (50%), Positives = 264/410 (64%), Gaps = 42/410 (10%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNCGLVEGVVCVQNSQEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+Q
Sbjct: 127 PMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQALRAVEKQLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRTGLQKFLETTSHSPGTVVSYEFMQDFRVHFKHEDGSEEKVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 325
L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+I VRN GKE
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQWIVVRNNTGKE 297
Query: 326 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 385
ML LVK LEI P +S G+R+P V + +KA D+A P +V L+ I+ +G
Sbjct: 298 MLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQLMGIVIDRIG 350
Query: 386 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNG 435
PKGLE+ ++S+D H RNYL+V R K + H+P +AK+IV Y+ G
Sbjct: 351 PKGLEYGKFSIDSHFARNYLYVKRHHPHK-LEAHVPEFAKRIVAQYDLPG 399
>gi|428768872|ref|YP_007160662.1| coenzyme F420 hydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683151|gb|AFZ52618.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium aponinum PCC 10605]
Length = 397
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 260/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAKD CS CGLCDTYYI +VK+ACAF+ +I LET+ HGR R
Sbjct: 8 RKAKALKQGSRRPAKDLCSECGLCDTYYIHYVKEACAFIN---QQITELETIAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ +D Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 65 NNENDLYFGVHQEMMSAKKIEPIEGAQWTGIVSTIACEMLTQGLVEGVVCVQNSDEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+P++A T EE+L AK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PKPIIATTTEEILGAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEDKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+ YEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVAYEFMQDFRVHFKHEDGSVEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGAPF--------GWQWIVVRNDIGREM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVKN L P IS GDR V ++ A D P + L+ I VGP
Sbjct: 297 LDLVKNQLHTQPVISRGDRTQAVQNSIPAYDQGVT-------LPMWAAKLMGVVIEKVGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K D H+P YA+KIV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLKD-HVPEYAEKIVSQY 393
>gi|298492095|ref|YP_003722272.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein ['Nostoc azollae' 0708]
gi|298234013|gb|ADI65149.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
['Nostoc azollae' 0708]
Length = 399
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 264/407 (64%), Gaps = 42/407 (10%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LET H R R
Sbjct: 10 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQKIDQLETTTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 67 EDENELYFGVHQEMMSARKLQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 127 PMPIIARTTEEILAAKVNKPTLSPNLSVLEQIEESGMKRLLVIGVGCQIQALRAIEKKLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPATVVSYEFMQDFRVHFKHEDGSEETVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 325
L N L D+ APSC SCFDY N+LAD+VVGYMG P P Q+I VRN+ G+E
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADIVVGYMGAP---------FPWQWILVRNDTGQE 297
Query: 326 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 385
ML LVK+ LE P + GDR+P V + ++A D A P +V L+ I+ +G
Sbjct: 298 MLELVKDQLETQPVMFQGDRKPAVQQGIEAYDKAVT-------LPMWVAKLMGVVIDKIG 350
Query: 386 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
PKGLE+ R+S+D H RNYL+V R +K + H+P +A++IV YN
Sbjct: 351 PKGLEYGRFSIDSHFARNYLYVKRNHPEK-LEAHLPEFARRIVGQYN 396
>gi|17229093|ref|NP_485641.1| hypothetical protein all1601 [Nostoc sp. PCC 7120]
gi|20141923|sp|P46015.2|Y1601_ANASP RecName: Full=Uncharacterized protein all1601
gi|17135421|dbj|BAB77967.1| all1601 [Nostoc sp. PCC 7120]
Length = 397
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 263/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV+N L+ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVQNQLDTQPVMSEGNRQEAVQQGISAYDKGVT-------LPMWVAKIMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL V R +K A H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNHPEKLA-AHVPEFAKRIVGQY 393
>gi|425452531|ref|ZP_18832348.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765618|emb|CCI08525.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 397
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425442236|ref|ZP_18822491.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716834|emb|CCH98976.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 397
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 262/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|443669256|ref|ZP_21134490.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
gi|159027297|emb|CAO86839.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330451|gb|ELS45165.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
Length = 397
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 262/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VKDACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKDACAFLH---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTIEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A+ H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLAN-HVPEYAKKIVEQY 393
>gi|166366747|ref|YP_001659020.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
gi|166089120|dbj|BAG03828.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
Length = 397
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 262/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|119487009|ref|ZP_01620881.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
gi|119455938|gb|EAW37072.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
Length = 400
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 261/406 (64%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYY+ +V++ACAF+ +I LET HG+ R
Sbjct: 11 RKAKALKPGSRRPAKELCSECGLCDTYYVHYVREACAFIN---QQITQLETQTHGQSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ DD Y GVH+ ++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+ +DR
Sbjct: 68 ENDDDLYFGVHQTMMAARKKQPIEGAQWTGIVSSIACEMLTQGIVEGVVCVQNTKEDRFQ 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 128 PMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKELG 187
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 247
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 248 GLNTKELKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 299
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV L+ P S G R+P V +++ A D P + L+ I +GP
Sbjct: 300 LDLVSGQLDTQPVHSEGKRQPAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 352
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQYE 397
>gi|390438179|ref|ZP_10226671.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389838407|emb|CCI30795.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 397
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 262/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH +G IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHENGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425460813|ref|ZP_18840294.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826458|emb|CCI23007.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 397
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425438251|ref|ZP_18818656.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676634|emb|CCH94392.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 397
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 260/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNNTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|186685427|ref|YP_001868623.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Nostoc
punctiforme PCC 73102]
gi|186467879|gb|ACC83680.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc punctiforme PCC 73102]
Length = 397
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 260/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELEVETHTRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN R GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSSETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVQDQLDTQPVTSKGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVEQY 393
>gi|425465794|ref|ZP_18845101.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831913|emb|CCI24943.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 397
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 262/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425457410|ref|ZP_18837113.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801237|emb|CCI19572.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 397
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425447724|ref|ZP_18827707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389731640|emb|CCI04319.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 397
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLARGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|434391958|ref|YP_007126905.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
gi|428263799|gb|AFZ29745.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
Length = 401
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/398 (51%), Positives = 257/398 (64%), Gaps = 40/398 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LET H R R D+ D+ Y GVH+
Sbjct: 23 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETRSHTRARNLDNSDELYFGVHQ 79
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+++ ARKT+P+ GAQWTGIV++IAI ML G+VE VVCVQ+ +DR P P++ARTPEE+
Sbjct: 80 DMMAARKTEPILGAQWTGIVSSIAIAMLNRGVVEGVVCVQNTKEDRFQPMPIIARTPEEI 139
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------V 218
LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q V
Sbjct: 140 LAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKQLGLEKLYVLGTPCV 199
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F L N L DV A
Sbjct: 200 DNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSEETVPFFGLKTNQLKDVFA 259
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 338
PSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EML LV++ LE P
Sbjct: 260 PSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEMLDLVQDQLETQP 311
Query: 339 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 398
+S GDR V +++ A D P + L+ I +GPKGLE+AR+S+D
Sbjct: 312 VMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPKGLEYARFSIDS 364
Query: 399 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
H RNYL+V R + +K A H+P +AK+IV Y Q
Sbjct: 365 HFTRNYLYVKRHYPEKLA-AHVPEFAKRIVNQYKLPSQ 401
>gi|425468516|ref|ZP_18847529.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884813|emb|CCI34912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 397
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKSNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|422301428|ref|ZP_16388796.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790684|emb|CCI13466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 397
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 258/404 (63%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLH---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LVK L+ +SSGDR+ V ++ A D P + ++ I +GPK
Sbjct: 298 ELVKAQLDTQDVMSSGDRKQAVQNSIPAYDKGVT-------LPMWAAKMMGVVIEKIGPK 350
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|220907665|ref|YP_002482976.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864276|gb|ACL44615.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7425]
Length = 402
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 256/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + PAK+ CS CGLCDTYYI +VK ACAFL + + LE+ H R R
Sbjct: 13 KKARALKSSSRRPAKELCSECGLCDTYYIHYVKTACAFLN---QQFDQLESQTHDRPRNL 69
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 70 ADDNELYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIEMLSRGLVEGVVCVQNTAEDRFQ 129
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PV+ARTP E+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 130 PKPVIARTPAEILAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVEQQLG 189
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 190 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRVHFKHEDGSEETVPFF 249
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N LADLVVGYMG P Q++ VRN+RG+EM
Sbjct: 250 GLKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNDRGREM 301
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LVK+ LE P +S GDRR V +++ A D P + L+ I +GP
Sbjct: 302 LELVKDQLETQPVMSQGDRRAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 354
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL V R + K H+P +AK+IV Y
Sbjct: 355 KGLEYARFSIDSHFTRNYLFVKRNYRDKLV-AHVPEFAKRIVNQY 398
>gi|411116284|ref|ZP_11388772.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
gi|410713775|gb|EKQ71275.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
Length = 403
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/411 (49%), Positives = 257/411 (62%), Gaps = 40/411 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEIEAHGRSRDL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH++++ ARK P+ GAQWTGIV++IAI+ML GMVE VVCVQ+ +DR
Sbjct: 69 ESQDDWYFGVHQDMMAARKKDPIPGAQWTGIVSSIAIQMLTRGMVEGVVCVQNTEEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+PV+ART +E+LAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+Q
Sbjct: 129 PKPVIARTTDEILAARVNKPTLSPNLSVLEQIEQSNMKRLLVIGVGCQIQALRTVEKQLG 188
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S P TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPSTVIHYEFMQDFRVHFKHEDGSTEMVPFF 248
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 249 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 300
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ + P +S GDR+ V ++ A D P + L+ I VGP
Sbjct: 301 LDLVRDQIATQPVMSQGDRKQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIERVGP 353
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 437
KGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y G+
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEYAKRIVSQYKLPGRF 403
>gi|428215878|ref|YP_007089022.1| coenzyme F420-reducing hydrogenase subunit beta [Oscillatoria
acuminata PCC 6304]
gi|428004259|gb|AFY85102.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoria
acuminata PCC 6304]
Length = 401
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 257/406 (63%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG R
Sbjct: 11 QKSKALKPGSRPPAKELCSECGLCDTYYIHYVKEACAFLNQ---QIATLEESAHGLSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIA ML G+VE VVCVQ+ P+DR
Sbjct: 68 ENPDELYFGVHQHMMAARKQEPIAGAQWTGIVSTIACSMLDRGLVEGVVCVQNTPEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LART EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 128 PMPILARTKAEVLAAKVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVQKELG 187
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +REGL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 188 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 247
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 248 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPYGW--------QWIVVRNQTGQEM 299
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV LE P +S GDR V +++ A + P + L+ I +GP
Sbjct: 300 LDLVTEQLETQPVMSRGDRHAAVQQSIPAYEKGVT-------LPMWAAKLMGVAIERIGP 352
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKQIVSQYQ 397
>gi|75910412|ref|YP_324708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Anabaena variabilis ATCC 29413]
gi|75704137|gb|ABA23813.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Anabaena variabilis ATCC 29413]
Length = 397
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 260/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D D+ Y GVH++++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DHPDELYFGVHQDMIAARKQQPIPGAQWTGIVSSIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S P+TV+HYEFMQD+++H H DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRIHFTHEDGSIEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNNTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVQDQLDTQPVMSQGNRQEAVQQGISAYDKGVT-------LPMWVAKMMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL V R +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNHPEK-LEAHVPEFAKRIVGQY 393
>gi|416384585|ref|ZP_11684662.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
gi|357265028|gb|EHJ13841.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
Length = 404
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 261/405 (64%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFIN---QQITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+ +DR P
Sbjct: 72 NEDECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQNTKEDRFGP 131
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+Q
Sbjct: 132 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 191
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +REGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 192 EKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 251
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE GKEML
Sbjct: 252 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGKEML 303
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
L+++ + P IS G+R+ V +++ A D P + L+ I VGPK
Sbjct: 304 GLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLMGVVIERVGPK 356
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 357 GLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|428772990|ref|YP_007164778.1| coenzyme F420 hydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428687269|gb|AFZ47129.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium stanieri PCC 7202]
Length = 398
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 261/406 (64%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---HQQIAELETQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ +D Y GV++E++ A+K +P+ GAQWTGIV+ IA +ML G+VE VVCVQ+ +DR
Sbjct: 65 DNENDLYFGVYQEMITAQKKEPIAGAQWTGIVSAIACKMLTEGLVEGVVCVQNSENDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+P++A T EE+L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 PKPIIATTTEEILGARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALREVEDKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TREGL KFL S P+TV+ YEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLDTTSDSPDTVVAYEFMQDFRVHFKHEDGRVEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGSPF--------GWQWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P +S G+R+ V ++ A D P + L+ I VGP
Sbjct: 297 LDLVQDQLKTQPVMSKGNRKQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIEKVGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+GLE+AR+S+D H RNYL+V R + +K D H+PSYAKKIV Y
Sbjct: 350 QGLEYARFSIDSHFTRNYLYVKRNYPEK-LDAHVPSYAKKIVSQYQ 394
>gi|443315201|ref|ZP_21044705.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
gi|442785212|gb|ELR95048.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
Length = 400
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/406 (50%), Positives = 257/406 (63%), Gaps = 41/406 (10%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAKD CS CGLCDTYYI +VKDACAFL + LET HGR R
Sbjct: 9 QKAKALRPGARRPAKDLCSECGLCDTYYIHYVKDACAFLN---QQFPTLETQTHGRSRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ DR
Sbjct: 66 ESEDDCYFGVHQDMMAARKQEPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTDRDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEE+LAA+ KPTLSPNL+ L V +G+KRLL GVGCQ+Q
Sbjct: 126 PMPIIARTPEEILAARVNKPTLSPNLSVLEQVAQSGMKRLLVIGVGCQIQALRAVESQLG 185
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 186 LEQLYVLGTPCVDNVTRAGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 245
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N LADLVVGYMG P Q+I VRN+RG+ M
Sbjct: 246 GLNTRELKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWIVVRNDRGQAM 297
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN-LVG 385
L V + L+ P S G+R V +++ A D P + L+ I+ ++G
Sbjct: 298 LETVMDQLDTQPVASQGNRVDAVQQSIAAYDKGVT-------LPMWAAKLLGIVIDKVLG 350
Query: 386 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
PKGLE+AR+S+D H RNYL+ R + +K A H+P +AK+IV Y
Sbjct: 351 PKGLEYARFSIDSHFTRNYLYTRRNYPEKLA-AHVPEFAKRIVSRY 395
>gi|56750204|ref|YP_170905.1| hypothetical protein syc0195_d [Synechococcus elongatus PCC 6301]
gi|81300168|ref|YP_400376.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
gi|56685163|dbj|BAD78385.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169049|gb|ABB57389.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
Length = 401
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 258/406 (63%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++ + PG PAKD CS CGLCDT Y+ +VK+ACAFL + E LE VHGR R
Sbjct: 8 RRARALKPGSRRPAKDLCSECGLCDTSYVHYVKEACAFLN---QQFEPLEQQVHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ Y GVH+ + A+K +P+EGAQWTGIV+ +A ML+ G VE VVCVQ+ P DR
Sbjct: 65 ENPDELYFGVHQSMTAAQKREPIEGAQWTGIVSALACRMLEQGWVEGVVCVQNSPSDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ART +E+LAA+ KPTLSPNLN L L+E +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTTDEILAARVNKPTLSPNLNILDLIEQSGLKRLLVIGVGCQIQALRAVQDKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL KFL+ S PETV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 185 LDKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEMVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDYTN LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 245 GLKTKELKDVFAPSCLSCFDYTNGLADLVVGYMGAPFGW--------QWLVVRNEIGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L+++ L + P SSGDRR V ++ A + P + L+ I +GP
Sbjct: 297 FDLIQDDLRLQPVQSSGDRRAAVQNSIPAYEQGVQ-------LPMWAAKLMGLVIERIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RN L+V R + +K A+ H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNALYVRRNYPEK-AETHIPEFAKRIVSQYQ 394
>gi|434386930|ref|YP_007097541.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
gi|428017920|gb|AFY94014.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
Length = 397
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 259/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDT+YI +VK ACAFL +I LET HGR R
Sbjct: 8 QKAKALKPNSKRPAKELCSECGLCDTHYIHYVKTACAFLN---QQIPTLETQTHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH++++ ARK +P+ GAQWTGIV+TIAIEML+ G+VE VVCVQ+ P+DR
Sbjct: 65 DKEDDLYFGVHQQMMAARKIEPIPGAQWTGIVSTIAIEMLEQGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ART E+LAAK KPTLSPNL+ L + +G+K+LL GVGCQ+Q
Sbjct: 125 PMPIIARTRAEILAAKVNKPTLSPNLSILEQIAESGLKKLLVIGVGCQIQALRAVEKELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
DN TR GL KFL+ S PETV++YEFMQD+ VH KH DG E VP+F
Sbjct: 185 LEQLYVLGTPCTDNVTRAGLQKFLETTSRSPETVVYYEFMQDFNVHFKHEDGSTELVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG++M
Sbjct: 245 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQQM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV N +E +S GDR V +++ A D A P +V ++ I+ +GP
Sbjct: 297 LDLVNNAIETQAVMSKGDRTAAVQQSIPAYDKAVT-------LPMWVAKIMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL R + +K ++H+P +AKKIV+ Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFTKRNYPEK-LEQHVPEFAKKIVDRY 393
>gi|434404674|ref|YP_007147559.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
gi|428258929|gb|AFZ24879.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
Length = 399
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 259/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET H R R
Sbjct: 10 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELETQTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 67 EDENEVYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 127 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKQLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S P+TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVVSYEFMQDFRVHFKHEDGSTETVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 247 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPF--------RWQWIVVRNDTGKEM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 299 LDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQY 395
>gi|334119192|ref|ZP_08493279.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
gi|333458663|gb|EGK87280.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
Length = 400
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 258/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEEEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+ +DR
Sbjct: 67 DNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++AR EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 127 PMPIIARNREEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL KFL S PETV+ YEFMQD+ VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFNVHFKHEDGSEEQVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV + L P +S G+R+ V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKLMGVFIERIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|67921512|ref|ZP_00515030.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
gi|67856624|gb|EAM51865.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
Length = 404
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 261/405 (64%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFINQ---QITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ ++ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+ +DR P
Sbjct: 72 NENECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQNTKEDRFDP 131
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+Q
Sbjct: 132 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 191
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +REGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 192 EKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 251
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE GKEML
Sbjct: 252 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGKEML 303
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
L+++ + P IS G+R+ V +++ A D P + L+ I VGPK
Sbjct: 304 GLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLMGVVIERVGPK 356
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 357 GLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|428216898|ref|YP_007101363.1| coenzyme F420 hydrogenase [Pseudanabaena sp. PCC 7367]
gi|427988680|gb|AFY68935.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena sp. PCC 7367]
Length = 396
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/404 (50%), Positives = 261/404 (64%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++KP+ PAK CS CGLCDTYYI +VK+ACAF+ I+ LE HGR R D
Sbjct: 7 KAKPLKNTTRRPAKALCSECGLCDTYYIHYVKEACAFI---TQHIDELEVESHGRSRDLD 63
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ ++ Y GVH++++ A+K +P+ GAQWTGIV++IAI+ML+ +VE VVCVQS DR P
Sbjct: 64 NENELYFGVHQDMIAAQKKEPIAGAQWTGIVSSIAIQMLEHKLVEGVVCVQSASHDRFQP 123
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
+PV+ART EVLAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 124 KPVIARTAAEVLAARVNKPTLSPNLSVLEEIEQSGIKRLLVIGVGCQIQALRTVEKELGL 183
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +R GLDKFL S PETV+HYEFMQD+ VH KH DG IE VP+F
Sbjct: 184 EKLYVLGTPCVDNVSRAGLDKFLNTTSRSPETVVHYEFMQDFNVHFKHEDGSIEMVPFFG 243
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 244 LNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 295
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV++ L+ P +SGDR V + + A DNA P ++ +I+F +N +GPK
Sbjct: 296 DLVQDQLKTQPVDASGDRAAAVQQGIAAYDNATT-------IPIWLAWIISFVVNKIGPK 348
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+ R+S+D H IRNYL+ R + +K A H+P +AK+IV Y
Sbjct: 349 GLEYGRFSIDSHFIRNYLYTRRNYPQKLA-AHVPEFAKRIVARY 391
>gi|443311444|ref|ZP_21041072.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
gi|442778482|gb|ELR88747.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
Length = 401
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 255/405 (62%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYY+ +VKDACAF+ +I LET H R R
Sbjct: 12 KKAKALKPSSRRPAKELCSECGLCDTYYVHYVKDACAFIN---QQIAELETQTHTRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D D+ Y GV++ ++ ARKT P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 69 DDADELYFGVNQGMMAARKTDPIEGAQWTGIVSSIAIEMLTKGLVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++ARTPE++L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 129 PMPIIARTPEDILKARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 188
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S P TV+ YEFMQDY+VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPGTVVSYEFMQDYRVHFKHEDGSTETVPFF 248
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN G+EM
Sbjct: 249 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNNTGQEM 300
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L++ +SSGDR V +++ A D P + ++ I +GP
Sbjct: 301 LDLVQDQLQVQEVMSSGDRTAAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 353
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K + H+P +AKKIV Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVQRQHPEK-LNAHVPEFAKKIVAQY 397
>gi|119512109|ref|ZP_01631202.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
gi|119463267|gb|EAW44211.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
Length = 397
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 260/405 (64%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAF+ +I GLE H R R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGGLEEQTHKRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNENELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+ RLL GVGCQ+Q
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMTRLLVIGVGCQIQALRAVEKELG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL FL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQTFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSSETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L+ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K A H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEFAKRIVGGY 393
>gi|300869262|ref|ZP_07113854.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
gi|300332718|emb|CBN59052.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
Length = 400
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 257/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE +HGR R
Sbjct: 10 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV++ ++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DNPDDWYFGVNQTMMAARKKEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++A TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 127 PMPIIATTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R+GL KFL+ S ETV+ YEFMQD+ VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRDGLQKFLETTSRSHETVVSYEFMQDFNVHFKHEDGTTEKVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV L P +S G+R P V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVMEQLNTQPVMSQGNRMPAVQQSIPAYEKGVT-------LPMWAAKLMGVFIEKIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEYAKRIVGQY 395
>gi|158335991|ref|YP_001517165.1| coenzyme F420 hydrogenase subunit beta [Acaryochloris marina
MBIC11017]
gi|158306232|gb|ABW27849.1| coenzyme F420 hydrogenase beta subunit [Acaryochloris marina
MBIC11017]
Length = 399
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 254/406 (62%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 10 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q+ +DR
Sbjct: 67 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQNTDEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ Q
Sbjct: 127 PKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQALRSVQDSLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN R GL FL+ S P+TV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 187 LEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHEDGSIETVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 247 GLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSP--------YGWQWLVVRNETGQEM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV + LE P IS GDR V ++ A D P + L+ I+ +GP
Sbjct: 299 LDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKLMGVVIDKIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 352 RGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 396
>gi|359460880|ref|ZP_09249443.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Acaryochloris sp. CCMEE 5410]
Length = 397
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 254/406 (62%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q+ +DR
Sbjct: 65 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQNTDEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ Q
Sbjct: 125 PKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQALRSVQDSLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN R GL FL+ S P+TV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHEDGSIETVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 245 GLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSPYGW--------QWLVVRNETGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV + LE P IS GDR V ++ A D P + L+ I+ +GP
Sbjct: 297 LDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKLMGVVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 350 RGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 394
>gi|255635378|gb|ACU18042.1| unknown [Glycine max]
Length = 199
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/199 (87%), Positives = 195/199 (97%)
Query: 246 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 305
MQDYK+HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+
Sbjct: 1 MQDYKIHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYS 60
Query: 306 GISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGP 365
GI MTQHPQY+TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGP
Sbjct: 61 GIGMTQHPQYVTVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGP 120
Query: 366 SQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 425
SQPAPKF+GNL+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAK
Sbjct: 121 SQPAPKFIGNLLAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAK 180
Query: 426 KIVEMYNQNGQIDQMLSSK 444
KIV++YNQNGQI++MLS+K
Sbjct: 181 KIVDLYNQNGQIEKMLSNK 199
>gi|170079232|ref|YP_001735870.1| putative coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Synechococcus sp. PCC 7002]
gi|169886901|gb|ACB00615.1| putative coenzyme F420 hydrogenase/dehydrogenase, beta subunit
[Synechococcus sp. PCC 7002]
Length = 399
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 253/406 (62%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K +P G PAK CS CGLCDT++I +VK+ACAFL + + LET VHGR R
Sbjct: 9 KKAKGLPRGSVRPAKALCSDCGLCDTHFIHYVKEACAFLN---QQFDKLETKVHGRKRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D + Y GVH++++ ARKT+P+EGAQWTGIV+++A +ML+ +VE VVCVQS PDDR
Sbjct: 66 DQEQEMYFGVHQKMVAARKTEPIEGAQWTGIVSSLACKMLEEKLVEGVVCVQSSPDDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++A TPEE+LAA+ KPTLSPNL L +E G K+LL GVGCQ+Q
Sbjct: 126 PMPIIATTPEEILAARVNKPTLSPNLTILEQIEQGGFKKLLVIGVGCQIQALRAVQDKLG 185
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL S PETV++YEFMQD+KVH KH DG E VP+F
Sbjct: 186 LEKLYVLGLPCVDNVTRAGLQKFLDTTSRSPETVVYYEFMQDFKVHFKHEDGSTETVPFF 245
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDYTN LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 246 GLKTNQLKDVFAPSCMSCFDYTNGLADLVVGYMGAPFGW--------QWMVVRNETGQEM 297
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
LV + +E P S GDRR V ++ A D P + L+ I +GP
Sbjct: 298 FDLVADQIETQPVSSKGDRRAAVQNSIPAYDKGVT-------LPMWAAKLMGIVIEKIGP 350
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+A++S+D H RNYL+ R + K + H+P +AKKIV Y
Sbjct: 351 KGLEYAKFSIDSHFTRNYLYTRRNYPGK-LEAHVPEFAKKIVAQYE 395
>gi|428220142|ref|YP_007104312.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 7502]
gi|427993482|gb|AFY72177.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 7502]
Length = 396
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/393 (50%), Positives = 252/393 (64%), Gaps = 40/393 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK CS CGLCDTYYI +VK+ACAF+ I+ LE H R R D+ + Y GVH+
Sbjct: 18 PAKALCSECGLCDTYYIHYVKEACAFI---TQHIQELEVQTHRRDRNLDNEQELYFGVHQ 74
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
E++ ARKT P+ GAQWTGIV++IAIEML +G VE VVCVQ+ DR +P+P++A TPEE+
Sbjct: 75 EMIAARKTDPIAGAQWTGIVSSIAIEMLTSGKVEGVVCVQASDSDRFTPKPIIATTPEEI 134
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------V 218
LAA+ KPTLSPNL+ L LVE +G+KRLL GVGCQ+Q V
Sbjct: 135 LAARVNKPTLSPNLSVLELVERSGMKRLLVIGVGCQIQALRTVEKQLGLEKLYVLGTPCV 194
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN R GL KFL S P TV+ YEFMQD+ VH KH DG E VP+F L +L DV A
Sbjct: 195 DNVNRAGLQKFLDTTSRSPSTVVSYEFMQDFNVHFKHEDGSTEMVPFFGLNTKELKDVFA 254
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 338
PSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML V++ LE P
Sbjct: 255 PSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEMLESVQSQLESQP 306
Query: 339 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 398
+SSGDR V + + A DNA P +V ++I F +N +GPKGLE+ R+S+D
Sbjct: 307 VMSSGDRHSAVQQGIAAYDNATT-------LPMWVASIINFVVNKIGPKGLEYGRFSIDS 359
Query: 399 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
H IRNYL+ R + +K + H+P +AK+I+ Y
Sbjct: 360 HFIRNYLYTKRNYPQK-LEAHVPEFAKRIIAQY 391
>gi|443322535|ref|ZP_21051555.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
gi|442787696|gb|ELR97409.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
Length = 397
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 256/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++++ + PG PAK+ CS CGLCDT+YI +VK+ACAFL +I LE HGR R
Sbjct: 8 QKARALKPGSRRPAKELCSECGLCDTHYIHYVKEACAFLN---QQIAALEATFHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+ IA ML G VE VVCVQ+ +DR
Sbjct: 65 DNENELYFGVHQQMIAARKKEPIEGAQWTGIVSAIACTMLTQGKVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LA TPEE+LAA+ KPTLSPNL+ L +E +G+KR+L GVGCQ+Q
Sbjct: 125 PMPILATTPEEILAARVNKPTLSPNLSILEQIEKSGMKRVLAIGVGCQIQALRTVEKKLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TREGL KFL S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLDTTSRSPETVVHYEFMQDFQVHFKHEDGSVEKVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L DV APSC SCFDY N+LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWLVVRNDTGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV LE +S GDR V +++ A D P + L+ I +GP
Sbjct: 297 LDLVWEQLETQAVMSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL++ R + KK + +P YA+KIV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYLKRNYPKK-LESQVPEYAQKIVNQY 393
>gi|86605899|ref|YP_474662.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
gi|86554441|gb|ABC99399.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
Length = 402
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 264/410 (64%), Gaps = 47/410 (11%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---- 105
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +R LE HGR R
Sbjct: 9 ARPIR-SGHYPAKELCSQCGLCDTRYVAHVKEACAFLNQQFTR---LEEQTHGRSRESLR 64
Query: 106 -RKDSLDDT-YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
+ D++ D+ Y GV+E + AR+ P+ GAQWTGIV++I ++ L +G+VE VVCVQ+DP
Sbjct: 65 SKSDAVSDSDYFGVYEAMYTARRRDPIPGAQWTGIVSSIGMKALSSGLVEGVVCVQADPR 124
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------ 217
DR PRPVLARTPE VLAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 DRFQPRPVLARTPEAVLAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVGCQIQALRAVE 184
Query: 218 ---------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 262
VDN +R GL KFL+ S P+TV+HYEFMQD+ VH KH DG +E+
Sbjct: 185 KNLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHVHFKHEDGSVEK 244
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 322
VP+F L +L DV APSC +CFDY N+LADLVVGYMG P Q++ VRN R
Sbjct: 245 VPFFGLKTKELKDVFAPSCLTCFDYVNSLADLVVGYMGSPFGW--------QWLLVRNAR 296
Query: 323 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 382
G+E+L LV LE P IS G RR V + ++A + A P ++ L+A I
Sbjct: 297 GRELLDLVWEELETQPVISRGSRRAAVQQGIQAYEQAL-------SLPMWLAQLLAVAIQ 349
Query: 383 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GP+GLE+AR+S+D H +RNYL+V R + K ++H+P +A++IVE Y
Sbjct: 350 RFGPRGLEYARFSIDSHFVRNYLYVRRHYPHK-LEQHVPPFARRIVEQYQ 398
>gi|428318671|ref|YP_007116553.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428242351|gb|AFZ08137.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 400
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 258/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+ +DR
Sbjct: 67 NNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P++A EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 127 PMPIIATNREEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL KFL S PETV+ YEFMQD+KVH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFKVHFKHEDGSEEKVPFF 246
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV + L P +S G+R+ V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKLMGVFIERIGP 351
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|407961454|dbj|BAM54694.1| hypothetical protein BEST7613_5763 [Bacillus subtilis BEST7613]
Length = 405
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 258/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 15 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+ P+DR
Sbjct: 72 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQNTPEDRFQ 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 132 PQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQALRAVEKQLG 191
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 192 LEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHEDGSTELVPFF 251
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L +V APSC SCFDY N LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 252 GLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNQTGQEM 303
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L I SSGDR V + + A D A P +V ++ I+ +GP
Sbjct: 304 LDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKIMGLVIDKIGP 356
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 357 TGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQY 400
>gi|16331168|ref|NP_441896.1| hypothetical protein slr1923 [Synechocystis sp. PCC 6803]
gi|383322911|ref|YP_005383764.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326080|ref|YP_005386933.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491964|ref|YP_005409640.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437232|ref|YP_005651956.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|451815324|ref|YP_007451776.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
gi|1653662|dbj|BAA18574.1| slr1923 [Synechocystis sp. PCC 6803]
gi|339274264|dbj|BAK50751.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|359272230|dbj|BAL29749.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275400|dbj|BAL32918.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278570|dbj|BAL36087.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781293|gb|AGF52262.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
Length = 398
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 258/406 (63%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 8 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+ P+DR
Sbjct: 65 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 PQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQALRAVEKQLG 184
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHEDGSTELVPFF 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L +V APSC SCFDY N LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNQTGQEM 296
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV++ L I SSGDR V + + A D A P +V ++ I+ +GP
Sbjct: 297 LDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKIMGLVIDKIGP 349
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 350 TGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQYK 394
>gi|86608737|ref|YP_477499.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557279|gb|ABD02236.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 402
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/410 (49%), Positives = 260/410 (63%), Gaps = 47/410 (11%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---R 106
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +++ LE HGR R R
Sbjct: 9 ARPIR-SGRYPAKELCSQCGLCDTRYVAHVKEACAFLNQQLTQ---LEEQTHGRSRESLR 64
Query: 107 KDSL---DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
SL D Y GV+E + ARK P+ GAQWTGIV++I ++ L TG+VE VVCVQ+D
Sbjct: 65 SGSLAVTDTDYFGVYEAMYTARKRDPIPGAQWTGIVSSIGMKALTTGLVEGVVCVQADER 124
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------ 217
DR PRP+LARTPE V AA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+Q
Sbjct: 125 DRFQPRPILARTPEAVWAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVGCQIQALRAVE 184
Query: 218 ---------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 262
VDN +R GL KFL+ S P+TV+HYEFMQD+ +H KH DG +E+
Sbjct: 185 KKLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHIHFKHEDGSVEK 244
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 322
VP+F L +L DV APSC SCFDY NALADLVVGYMG P Q++ VRN+R
Sbjct: 245 VPFFGLKTKELKDVFAPSCLSCFDYVNALADLVVGYMGSPLGW--------QWLLVRNQR 296
Query: 323 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 382
G+E+L LV LE P IS G RR V + + A D A P ++ L+ I
Sbjct: 297 GQELLDLVWEELETQPVISQGSRRAAVQQGIPAYDQAL-------SLPMWLARLLGAAIQ 349
Query: 383 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GP+GLE+AR+S+D H RNYL+V R + +K ++H+P +A++IVE Y
Sbjct: 350 RFGPRGLEYARFSIDSHFTRNYLYVRRHYPQK-LEQHVPPFARRIVEQYQ 398
>gi|428302019|ref|YP_007140325.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 6303]
gi|428238563|gb|AFZ04353.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 6303]
Length = 404
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/413 (47%), Positives = 261/413 (63%), Gaps = 47/413 (11%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTY++ +VK+ACAF+ +I LE HGR R
Sbjct: 8 KKAKALKAGSRRPAKELCSECGLCDTYFVHYVKNACAFINQ---QIGALEQQTHGRERLT 64
Query: 108 -------DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS 160
++ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML GMVE VVCVQ+
Sbjct: 65 SRQLPILENPDELYFGVHQQMMAARKVEPIEGAQWTGIVSSIAIEMLNRGMVEGVVCVQN 124
Query: 161 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ--- 217
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+Q
Sbjct: 125 TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALR 184
Query: 218 ------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 259
VDN TR GL KFL S P+TV++YEFMQD++VH KH DG
Sbjct: 185 AVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVYYEFMQDFRVHFKHEDGS 244
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 319
+E VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q++ VR
Sbjct: 245 LETVPFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWLIVR 296
Query: 320 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 379
N+ GKEML LV++ +E P S G R+ V +++ A D P + L+
Sbjct: 297 NDTGKEMLELVQDQIETQPVTSQGKRQEAVQQSIPAYDKGVT-------LPMWAAKLMGV 349
Query: 380 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV+ Y
Sbjct: 350 VIEKIGPKGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEFAKQIVKQYK 401
>gi|427701554|ref|YP_007044776.1| coenzyme F420-reducing hydrogenase subunit beta [Cyanobium gracile
PCC 6307]
gi|427344722|gb|AFY27435.1| coenzyme F420-reducing hydrogenase, beta subunit [Cyanobium gracile
PCC 6307]
Length = 406
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/405 (47%), Positives = 257/405 (63%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G PAKD CS CGLCD+ ++A+V+ ACAFL R E +E HGR RR D
Sbjct: 17 RARPLAKGSPKPAKDLCSDCGLCDSRWVAYVRRACAFLE---QRFEAMEEQAHGRSRRLD 73
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GVH+ ++ AR +P+EGAQWTGIV+ I + L++G+V+AV+CVQ PDDR +P
Sbjct: 74 DEDELYFGVHQRMVTARLRQPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQSPDDRFTP 133
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PVLARTP+EVLAA+ KPTLSPNL L + +G++RLL GVGCQ+Q
Sbjct: 134 VPVLARTPQEVLAARVNKPTLSPNLEVLEQLPGSGIERLLAIGVGCQIQALRAVQATLPL 193
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +R+GL FL++AS P+TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 194 QKLYVLGLPCVDNVSRQGLQTFLESASRSPDTVVHYEFMQDFRIHFRHSDGQEETVPFFG 253
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L L DV APSC SCFDYTNA ADLVVGYMG T Q++TVRN G+E+L
Sbjct: 254 LDTPALKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWVTVRNPLGQELL 305
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV+ L++ P SSGDRR V + + A + A P ++ L+ F+ GPK
Sbjct: 306 DLVEPELDLAPVTSSGDRRQAVQQGIDAYEKALK-------LPMWLAELVGVFVQRFGPK 358
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+ R+S+D H RN L + R +K D H+P++A++IV Y
Sbjct: 359 GLEYGRFSIDSHFTRNALWLQRHHPEK-VDAHIPAFARRIVARYR 402
>gi|449016811|dbj|BAM80213.1| similar to coenzyme F420-reducing hydrogenase, beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 508
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 250/405 (61%), Gaps = 50/405 (12%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
YPAK CS CGLCDT YI +V+D+CAFL I LE VHGR R DS D+ Y GV
Sbjct: 118 VYPAKSLCSHCGLCDTRYITYVRDSCAFLNQ---HIAELEQKVHGRSRALDSEDELYFGV 174
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
+ +L ARK KP+ GAQWTGIV+++AI ML++G+VE VVCVQS DDR P PV+AR
Sbjct: 175 FQSMLVARKKKPIAGAQWTGIVSSLAIAMLESGLVEGVVCVQSSKDDRFKPVPVIARNRA 234
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------------------- 217
E+LAA+ KPTLSPNL+ L VE +G+KRLLF GVGCQV+
Sbjct: 235 EILAARVNKPTLSPNLSVLDAVERSGIKRLLFIGVGCQVEALRSVQDRIGLEKLYVLGTP 294
Query: 218 -VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI--------EEVPYFCL 268
VDN TR GL KFL SS PETV++YEFMQD++VH KH D I E VP+F L
Sbjct: 295 CVDNVTRAGLQKFLDTTSSSPETVVYYEFMQDFRVHFKHDDSVIGGPGRKWDEIVPFFAL 354
Query: 269 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
+L +V APSC SCFDY N LADLVVGYMG P Q++ RNE G EML
Sbjct: 355 NTQELKEVFAPSCLSCFDYVNGLADLVVGYMGAPF--------GWQWLVARNETGLEMLE 406
Query: 329 LVKNL--LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L + + LE P + GDRR V +++ A D A P+++ +A I +GP
Sbjct: 407 LARQVCGLEEGPVDACGDRRAAVQQSITAYDRALT-------LPRWIAEFLAIIIGKIGP 459
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IV Y
Sbjct: 460 KGLEYARFSIDSHFTRNYLYVRRRYPEK-LDAHVPEYAKRIVSQY 503
>gi|318040250|ref|ZP_07972206.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0101]
Length = 404
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/405 (46%), Positives = 258/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+KP+ G YPAKD CS+CGLCD+ ++A+VKD+CAFL R + +E HGR R
Sbjct: 15 ERAKPLAKGSVYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFDAMEAAAHGRSRDL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV + +L AR +P++GAQWTGIV+ I + L+TG+V+AV+CV DDR +
Sbjct: 72 DNEDELYFGVQQRMLTARLQQPLDGAQWTGIVSRIGVRALETGLVDAVLCVGQSEDDRFT 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P LARTPEEVL+A+ KPTLSPNL L + +G+KRLL GVGCQ+Q
Sbjct: 132 PVPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIKRLLAIGVGCQIQALRAVQPTLP 191
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R+GL FL++ S P+TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 192 LDELFVLGLPCVDNVSRQGLQTFLESTVSSPDTVVHYEFMQDFRIHFRHSDGREETVPFF 251
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L L DV APSC SCFDYTNA ADLVVGYMG T Q++TVRN +G+++
Sbjct: 252 GLDTPKLKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWLTVRNPKGQQL 303
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV+ L++ P SSG R+ V + ++A D A P +V NLI FF+ GP
Sbjct: 304 LDLVEAELDVAPVSSSGQRQAAVQQGIEAYDKAVK-------LPIWVANLIGFFVERFGP 356
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+ R+S+D H RN + + R K + H+P++A++I+ Y
Sbjct: 357 KGLEYGRFSIDSHFTRNAVWLRRHHPDK-VEAHIPAFARRIISRY 400
>gi|87303404|ref|ZP_01086192.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
gi|87282052|gb|EAQ74014.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
Length = 394
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/405 (46%), Positives = 257/405 (63%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PA+D CS CGLCDT ++A+V+DACAFL G R+E L HGR R
Sbjct: 5 ERARPLAKGSVKPARDLCSECGLCDTGWVAYVRDACAFLTQGFDRMEEL---AHGRRRDL 61
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D+ Y GV+E +L AR P+EGAQWTGIV+ I + L++G+V+AV+CVQ PDDR +
Sbjct: 62 ANDDELYFGVYERMLTARLQPPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQSPDDRFT 121
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PVLARTPEEVLAA+ KPTLSPNL L + +G++RLL GVGCQ+Q
Sbjct: 122 PVPVLARTPEEVLAARVNKPTLSPNLEVLQQLPGSGIRRLLAIGVGCQIQALRAVQDTLP 181
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL FL++AS +TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 182 LDELYVLGMPCVDNVSRSGLQTFLESASRSADTVVHYEFMQDFRIHFRHSDGSEETVPFF 241
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L +L V APSC SCFDYTNA ADLVVGYMG + Q++ VRN +G+++
Sbjct: 242 GLDTPNLKSVFAPSCLSCFDYTNAGADLVVGYMGA--------SFGRQWLVVRNPKGQQL 293
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV+ L+ P S G+RR V + ++A D A P ++ ++ FF+N GP
Sbjct: 294 LDLVEAELDTAPVTSQGNRRAAVQQGIEAYDKAVK-------LPLWLAEVVGFFVNRFGP 346
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
KGLE+ R+S+D H RN + V R +AD+H+P++AK I+ Y
Sbjct: 347 KGLEYGRFSIDSHFTRNAIWVRRH-HPDQADRHIPAFAKAIISRY 390
>gi|88808927|ref|ZP_01124436.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
gi|88786869|gb|EAR18027.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
Length = 402
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/405 (46%), Positives = 254/405 (62%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQD---FDGMERKAHGRTRNLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GV + +L AR P++GAQWTGIV+ + + L++G+V+AV+CVQ PDDR +P
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIDGAQWTGIVSRLGVRALESGLVDAVLCVQQSPDDRFTP 129
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PVLARTP EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQ
Sbjct: 130 MPVLARTPAEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQALRAVQDTLPL 189
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H DGH+E VP+F
Sbjct: 190 DALYVLGLPCVDNVSREGLQTFLESASASPDTVVHYEFMQDFRIHFRHSDGHVETVPFFG 249
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L L DV APSC SCFDY NA ADLVVGYMG Q++ VRN RG+E+L
Sbjct: 250 LDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLVVRNSRGEELL 301
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV+ L+ P S GDRR V + + A D A P ++ L+ + + VGPK
Sbjct: 302 KLVEAELDQAPVSSRGDRRQAVQQGIDAYDKALR-------LPMWLAELVGWIVQRVGPK 354
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 355 GLEYGRFSIDSHFTRNALWLRRH-HPEMVERHLPAFARRIVERYR 398
>gi|148239886|ref|YP_001225273.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
WH 7803]
gi|147848425|emb|CAK23976.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
WH 7803]
Length = 402
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 40/405 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQD---FDGMERKAHGRARDLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GV + +L AR P+ GAQWTGIV+ + + L+TG+V+AV+CVQ PDDR +P
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIAGAQWTGIVSRLGVRALETGLVDAVLCVQQSPDDRFTP 129
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
PVLARTPEEVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQ
Sbjct: 130 MPVLARTPEEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQALRAVQDTLPL 189
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
VDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H DG +E VP+F
Sbjct: 190 EALYVLGLPCVDNVSREGLQTFLESASATPDTVVHYEFMQDFRIHFRHSDGRVETVPFFG 249
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L L DV APSC SCFDY NA ADLVVGYMG Q++ VRN RG+++L
Sbjct: 250 LDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLVVRNSRGEDLL 301
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV+ L+ P +S GDRR V + + A D A P ++ ++ + + VGPK
Sbjct: 302 KLVEAELDQAPVMSRGDRRQAVQQGIDAYDKALR-------LPMWLAEVVGWIVQRVGPK 354
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
GLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 355 GLEYGRFSIDSHFTRNALWLRRH-HPEVVERHLPAFARRIVERYR 398
>gi|254432879|ref|ZP_05046582.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
gi|197627332|gb|EDY39891.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
Length = 381
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/395 (47%), Positives = 248/395 (62%), Gaps = 40/395 (10%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAKD CS+CGLCD+ ++A+V+ +CAFL R E +E HGR R D+ D+ Y GVH
Sbjct: 2 YPAKDLCSQCGLCDSRWVAYVRQSCAFL---HQRFEAMEAAAHGRSRDLDNEDELYFGVH 58
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ ++ AR +P+EGAQWTGIV+ I + L+TG+V+AV+CV DR +P P LARTPEE
Sbjct: 59 QRMVTARLARPLEGAQWTGIVSRIGVRALETGLVDAVLCVGQSEHDRFTPVPRLARTPEE 118
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ--------------------- 217
VL+A+ KPTLSPNL L + +G++RLL GVGCQ+Q
Sbjct: 119 VLSARVNKPTLSPNLEVLEQLPGSGIRRLLAIGVGCQIQALRAVQPTLPLDALYVLGLPC 178
Query: 218 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 277
VDN +R GL FL++ S PETV+HYEFMQD+++H +H DG E VP+F L L DV
Sbjct: 179 VDNVSRAGLQTFLESTVSSPETVVHYEFMQDFRIHFRHSDGRTETVPFFGLDTPKLKDVF 238
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
APSC SCFDYTNA ADLVVGYMG Q+ITVRN G+++L LV+ L++
Sbjct: 239 APSCLSCFDYTNAGADLVVGYMGAEFGR--------QWITVRNPLGQQLLDLVEPELDVA 290
Query: 338 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 397
P S GDRR V + ++A D A P+++ LI F+ GPKGLE+ R+S+D
Sbjct: 291 PVTSRGDRRAAVQQGIEAYDKAVK-------LPRWLAELIGVFVQRFGPKGLEYGRFSID 343
Query: 398 YHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
H RN L V R +K A+ H+P++A++IV Y
Sbjct: 344 SHFTRNALWVRRHHPEK-AEAHIPAFARRIVSRYR 377
>gi|116073059|ref|ZP_01470321.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
gi|116068364|gb|EAU74116.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
Length = 381
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/393 (47%), Positives = 246/393 (62%), Gaps = 40/393 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAKD CS CGLCD+ ++A+V+ ACAFL EG+E HGR R D+ D+ Y GV +
Sbjct: 3 PAKDLCSDCGLCDSRWVAYVRQACAFL---HQDFEGMERRYHGRSRDLDNEDELYFGVQQ 59
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L AR +P+EGAQWTGIV+ + ++ LKTG+V+AV+CVQ PDDR +P PVLARTPEEV
Sbjct: 60 RMLTARLRQPIEGAQWTGIVSHLGVQALKTGLVDAVLCVQQSPDDRFTPMPVLARTPEEV 119
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------V 218
+AA+ KPTLS NL+ L + +G+KRLL GVGCQ+Q V
Sbjct: 120 MAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQIQALRSVQDTLPLDELYVLGLPCV 179
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN +REGL+ FL +AS P+TV+HYEFMQD+++H +H DG E VP+F L L DV A
Sbjct: 180 DNVSREGLNTFLNSASDSPDTVVHYEFMQDFRIHFRHRDGREETVPFFGLDTPKLKDVFA 239
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 338
PSC SCFDYTNA ADLVVGYMG Q++ VRN RG ++L LV+ L+
Sbjct: 240 PSCLSCFDYTNAGADLVVGYMGAEF--------GRQWLVVRNARGAQLLKLVEADLDTAS 291
Query: 339 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 398
S GDRR V + + A D A P +V + + + +GPKGLE+ R+S+D
Sbjct: 292 VTSRGDRRAAVQQGIDAYDKAL-------KLPMWVAEAVGWVVQRIGPKGLEYGRFSIDS 344
Query: 399 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
H RN L V R + +H+P++A+KIVE Y
Sbjct: 345 HFTRNALWVRRNHSDQYT-RHLPAFARKIVERY 376
>gi|317970406|ref|ZP_07971796.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0205]
Length = 405
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/404 (45%), Positives = 254/404 (62%), Gaps = 40/404 (9%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G TYPAKD CS+CGLCD+ ++A+VKD+CAFL R E +ET HGR R +
Sbjct: 16 RARPLAKGSTYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFEAMETAAHGRSRDLE 72
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GV + +L AR +P++GAQWTGI + I + L++G+V+AV+CV DDR +P
Sbjct: 73 NEDELYFGVQQRMLTARLQQPIDGAQWTGIASRIGVLALESGLVDAVLCVGQSEDDRFTP 132
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ----------- 217
P LARTPEEVL+A+ KPTLSPNL L + +G+++LL GVGCQ+Q
Sbjct: 133 VPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIRKLLAIGVGCQIQALRAVESTLPL 192
Query: 218 ----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
DN +REGL FL+ S PETV+HYEFMQD+++H +H DG E VP+F
Sbjct: 193 DQLYVLGLPCTDNVSREGLQTFLETTVSSPETVVHYEFMQDFRIHFRHSDGREETVPFFG 252
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
L L +V APSC SCFDYTNA ADLVVGYMG T Q++TVRN RG+++L
Sbjct: 253 LDTPKLKNVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWLTVRNPRGQQLL 304
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
LV+ L++ P S G R+ V + ++A D A P ++ +I F+ GP+
Sbjct: 305 DLVEAELDVAPVTSRGQRQAAVQQGIEAYDKALK-------LPIWLAKIIGCFVGRFGPQ 357
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLE+ R+S+D H RN L + R +K + H+P++A++I+ Y
Sbjct: 358 GLEYGRFSIDSHFTRNALWLRRNHPEK-VEAHIPAFAQRIISRY 400
>gi|37520447|ref|NP_923824.1| hypothetical protein gll0878 [Gloeobacter violaceus PCC 7421]
gi|35211441|dbj|BAC88819.1| gll0878 [Gloeobacter violaceus PCC 7421]
Length = 391
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 192/400 (48%), Positives = 249/400 (62%), Gaps = 40/400 (10%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P PA + CS CGLCDT Y+ + K ACAF+ M + LE+ HGR R D+ +
Sbjct: 7 PKPKNRPALELCSECGLCDTSYLRYAKWACAFITQHM---DELESKTHGRERDLDNEREL 63
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
Y GVH ++ ARK KPVEGAQWTGIV+TI + L++G+V+AV+CV +D DR +PRP+LA
Sbjct: 64 YFGVHRQMYAARKRKPVEGAQWTGIVSTIGVRALESGLVDAVLCVGADKIDRFTPRPLLA 123
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------- 217
RTPEEVLAA+ KPTLSPNL+ L + G+KRLL GVGCQ+Q
Sbjct: 124 RTPEEVLAARVNKPTLSPNLSVLDEIPKLGIKRLLAIGVGCQIQALRTVQDKLGLEALYV 183
Query: 218 -----VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
VDN TR+GL FL + S P TV+HYEFMQD+++H KH DG IE+VP+F L
Sbjct: 184 LGTPCVDNVTRQGLQTFLDSTSRSPATVVHYEFMQDFRIHFKHEDGSIEKVPFFGLDTKA 243
Query: 273 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 332
L +V APSC SCFDY N LADLVVGYMG Q+I RNE+G+ +L LV++
Sbjct: 244 LKEVFAPSCLSCFDYVNGLADLVVGYMGA--------QFGWQWIVERNEKGRVLLDLVRD 295
Query: 333 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 392
LE T + SG R V + ++A D A P +V ++ I+ +GP+GLE+A
Sbjct: 296 ELEFTDIVESGKRFAAVQQGIEAYDKAVT-------LPMWVAKVMGAVIDKIGPRGLEYA 348
Query: 393 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
R+S+D H RNYL+V R + K D+H+P YAKKIV Y
Sbjct: 349 RFSIDSHFARNYLYVRRRYPGK-FDRHIPRYAKKIVSRYK 387
>gi|452822609|gb|EME29627.1| coenzyme F420 hydrogenase beta subunit [Galdieria sulphuraria]
Length = 485
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 187/402 (46%), Positives = 250/402 (62%), Gaps = 48/402 (11%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAK CS CGLCDT +I +VKD+CAFL +S LE VHG+ R + ++ Y GVH
Sbjct: 98 YPAKSLCSHCGLCDTRFIHYVKDSCAFLNQHISE---LEYTVHGKSRDLEVENELYFGVH 154
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
++ AR+ +P+ GAQW+GIVT+IA +L+TG V+ +VCV++D DR P+PVLA TPEE
Sbjct: 155 LNMIAARRKQPLPGAQWSGIVTSIATRLLETGKVQGIVCVRNDEQDRFQPKPVLATTPEE 214
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ--------------------- 217
+ A++ KPTLSPNL+ L VEA+G R+ GVGCQV+
Sbjct: 215 IYASRVNKPTLSPNLSVLDTVEASGFTRIGVIGVGCQVEALRSVQSKLGLEKLYVLGTPC 274
Query: 218 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI--------EEVPYFCLP 269
VDN TR+GLDKFL+ S+ P+TV+HYEFMQD++VH KH D + E VP+F L
Sbjct: 275 VDNVTRKGLDKFLRTTSTSPDTVVHYEFMQDFRVHFKHDDKVVGGPGKQWTETVPFFGLK 334
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 329
N+L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRNE G EML L
Sbjct: 335 TNELKDIFAPSCLSCFDYVNSLADLVVGYMGAPF--------GWQWIVVRNEIGMEMLDL 386
Query: 330 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 389
V + +E P SSG+R V ++ A D P ++ L+ I+ +GPKGL
Sbjct: 387 VSSQIETMPLSSSGNRLQAVQNSIPAYDKG-------MTLPMWIAQLLGVVIDKLGPKGL 439
Query: 390 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
E+AR+S+D H RNYL++ R + +H+P YA++I+E Y
Sbjct: 440 EYARFSIDSHFTRNYLYMKRNF-PNILQRHVPEYARRIIEQY 480
>gi|194477230|ref|YP_002049409.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
gi|171192237|gb|ACB43199.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
Length = 404
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/405 (45%), Positives = 255/405 (62%), Gaps = 40/405 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PAKD CS CGLCD+ ++A+V+ AC FL R E +E HGR R
Sbjct: 15 ERTRPLSKGKVKPAKDLCSECGLCDSRWVAYVRHACPFLNQ---RFETMELETHGRIRNL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ + Y GVH +L AR KP+ GAQWTGIV+ + I+ LKTG+V+AV+CVQ DR +
Sbjct: 72 DNEKELYFGVHNRMLTARLKKPIAGAQWTGIVSQLGIQALKTGLVDAVLCVQQGEQDRFT 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LARTPEEVLAA+ K TLSPNL L + +G+K+LL GVGCQVQ
Sbjct: 132 PVPILARTPEEVLAARVNKATLSPNLEALEQLSGSGIKKLLAIGVGCQVQALRAVQSTLP 191
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +R GL FL++ S P TV+HYEFMQD+ +H H +G E + +F
Sbjct: 192 LDELYVLGMPCVDNVSRTGLQTFLESTSKSPNTVVHYEFMQDFYIHFHHSNGSKETISFF 251
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L + D+ APSC SCFDY NA ADLV+GYMG K+ Q++TVRN RG+++
Sbjct: 252 GLDTPKVKDIFAPSCLSCFDYVNAGADLVIGYMGA-KFG-------YQWLTVRNTRGEKL 303
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
LSL+++ L+I P SSGDR V + + A + A P ++ +L+A+++ +GP
Sbjct: 304 LSLIESQLDILPVDSSGDRHSAVQQGIDAYNKA-------LKLPIWIASLVAWWVKYIGP 356
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+GLE++R+S+D H RN L + R +K A++H+P++AKKIV Y
Sbjct: 357 QGLEYSRFSIDSHFTRNALWLWRHHSEK-AEQHIPAFAKKIVSRY 400
>gi|87124766|ref|ZP_01080614.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
gi|86167645|gb|EAQ68904.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
Length = 386
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/398 (45%), Positives = 247/398 (62%), Gaps = 40/398 (10%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G PA+D CS CGLCD+ ++A+VK ACAFL E +E HGR R D D+ Y
Sbjct: 4 GTVRPARDLCSDCGLCDSRWVAYVKRACAFLHQDF---EAMERRSHGRSRDLDQEDELYF 60
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLART 175
GVHE ++ AR P++GAQWTGIV+ + + L+ G+V+AV+CVQ P+DR +P PVLART
Sbjct: 61 GVHERMVTARMRAPIDGAQWTGIVSHLGAKALERGLVDAVLCVQQSPEDRFTPVPVLART 120
Query: 176 PEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------------------ 217
PEEV+AA+ KPTLS NL+ L + +G++ LL GVGCQ+Q
Sbjct: 121 PEEVMAARVNKPTLSNNLSVLEQLPGSGIRNLLAIGVGCQIQALRAVEDTLPLDALYVLG 180
Query: 218 ---VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 274
VDN +R+GL FL++AS PETV+HYEFMQD+++H +H DG E VP+F L L
Sbjct: 181 LPCVDNVSRQGLQTFLESASDSPETVVHYEFMQDFRIHFRHRDGRQETVPFFGLDTPRLK 240
Query: 275 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL 334
DV APSC SCFDY NA ADLVVGYMG +Y Q++ VRN+RG +L L++ L
Sbjct: 241 DVFAPSCLSCFDYVNAGADLVVGYMGA-EYGR-------QWLVVRNQRGAALLDLIEADL 292
Query: 335 EITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARY 394
++ P S GDRR V + + A D A P ++ L+ + + +GPKGLE+ R+
Sbjct: 293 DLAPVTSRGDRRAAVQQGIDAYDKAVR-------LPMWLAELVGWVVQRIGPKGLEYGRF 345
Query: 395 SLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
S+D H RN L + R + D+H+P++A++IVE Y
Sbjct: 346 SIDSHFTRNALWLRRH-HPEVVDRHLPAFARRIVERYR 382
>gi|148241873|ref|YP_001227030.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
RCC307]
gi|147850183|emb|CAK27677.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
RCC307]
Length = 397
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 253/406 (62%), Gaps = 40/406 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++KP+ G PAKD CS CGLCD+ ++A+V+ ACAF+ + E LE HGR R
Sbjct: 7 QKAKPMARGTLRPAKDLCSDCGLCDSRWVAYVRQACAFI---HQQFESLERKAHGRSRDL 63
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV E + A+ +P+EGAQWTGIV+T+ + L+ +V+AV+CVQ P+DR +
Sbjct: 64 DNEDELYFGVTERMFCAQLQQPLEGAQWTGIVSTLGVRALEQNLVDAVLCVQQSPEDRFT 123
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P PVLARTP+EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQ Q
Sbjct: 124 PMPVLARTPQEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQTQALRAVQDSLG 183
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN +REGL FL++ S PETV+HYEFMQD+++H +H DG E VP+F
Sbjct: 184 LEELYVLGMPCVDNVSREGLQTFLESTSRSPETVVHYEFMQDFRIHFRHSDGSTETVPFF 243
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L L DV APSC SCFDY NA ADLVVGYMG P Q++ VRN+RG+++
Sbjct: 244 GLDTPKLKDVFAPSCLSCFDYVNACADLVVGYMGAPF--------QWQWLVVRNQRGQKL 295
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
L LV+ L+ P +SSG R V + + A D A P+++ ++ + VGP
Sbjct: 296 LDLVEAELKTQPVMSSGQRAQAVQQGIDAYDKALR-------LPRWLAEVVGVVVQRVGP 348
Query: 387 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
KGLE+AR+S+D H RN + R +K A +H+P++A+KIV Y
Sbjct: 349 KGLEYARFSIDSHFTRNATWLRRHHPEKLA-QHLPAFAQKIVSRYR 393
>gi|423065981|ref|ZP_17054771.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712480|gb|EKD07665.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 330
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 217/326 (66%), Gaps = 32/326 (9%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML +VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQSIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------- 217
P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+Q
Sbjct: 128 PMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 266
VDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 327 LSLVKNLLEITPTISSGDRRPFVMET 352
L L+++ L+ P S GDRR V ++
Sbjct: 300 LDLIQDQLDTQPVSSQGDRRAAVQQS 325
>gi|254422838|ref|ZP_05036556.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
gi|196190327|gb|EDX85291.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
Length = 353
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/362 (49%), Positives = 227/362 (62%), Gaps = 37/362 (10%)
Query: 91 SRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTG 150
++ LE HGR R D++D+ Y GVH++++ ARK P+EGAQWTGIV+T+AIEML G
Sbjct: 3 QQVSDLEAANHGRARDLDNVDELYFGVHQKMVAARKLAPIEGAQWTGIVSTLAIEMLDRG 62
Query: 151 MVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
+VE VVCVQ+ DDR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KR+L
Sbjct: 63 LVEGVVCVQNTEDDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLDQIERSGMKRVLVI 122
Query: 211 GVGCQVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDY 249
GVGCQ+Q VDN TR GL KFL+ S PETV+ YEFMQD+
Sbjct: 123 GVGCQIQALRAVQDQIGLEKLYVLGMPCVDNVTRAGLQKFLETTSRSPETVVAYEFMQDF 182
Query: 250 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 309
+VH KH DG E+VP+F L N L DV APSC SCFDYTN+LAD+VVGYMG P
Sbjct: 183 QVHFKHEDGSEEKVPFFGLKTNKLKDVFAPSCMSCFDYTNSLADIVVGYMGAPFGW---- 238
Query: 310 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 369
Q+I VRNE G +M L+ ++E P SSGDR V ++ A D
Sbjct: 239 ----QWIVVRNETGAQMFELLDGIIETQPVESSGDRTQAVQNSIPAYDKGVT-------L 287
Query: 370 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 429
P + L+ I +GPKGLE+AR+S+D H RNYL+ R +K A H+P +AK+IV
Sbjct: 288 PMWAAKLMGVVIEKIGPKGLEYARFSIDSHFTRNYLYTRRNHPEKLA-AHVPEFAKRIVG 346
Query: 430 MY 431
Y
Sbjct: 347 QY 348
>gi|219113003|ref|XP_002186085.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582935|gb|ACI65555.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 536
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/419 (43%), Positives = 249/419 (59%), Gaps = 41/419 (9%)
Query: 52 PIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
PI P G +PAK+HCS+CGLC+T Y+A VK+ACAFL GMSRI+ LET VHGR RRK
Sbjct: 102 PIDPEGRPYKFPAKEHCSKCGLCETSYVARVKEACAFLEPGMSRIDTLETKVHGR-RRKT 160
Query: 109 SLDDTYL-------GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
+ D T + GV + L + + GAQWTG+V++IAI ML+T V+AV CV S+
Sbjct: 161 TDDKTIVQADERRFGVQYQPLRLARGISMPGAQWTGVVSSIAISMLETRQVDAVACVASN 220
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQ--- 217
+ +P P+LA+T +EVL +GVKP+L+P+LN L V+ ++RLLFCGVGC VQ
Sbjct: 221 EETWSNPNPILAQTTDEVLKGRGVKPSLAPSLNILDEVKNDPSIRRLLFCGVGCSVQALR 280
Query: 218 -----------------VDNGTREGLDKFL--KAASSEPETVLHYEFMQDYKVHLKHLDG 258
VDN G K A ++V YEFMQD++VH+K +
Sbjct: 281 SIENELGIEIFILGTNCVDNSPSPGAAAAFIEKGAKVFSDSVRGYEFMQDFRVHVKTEET 340
Query: 259 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 318
++ +PYFCLP IA SC SCFDYTNALAD+VVGYM P M + Q +TV
Sbjct: 341 YL-TIPYFCLPGTIAESSIAKSCRSCFDYTNALADVVVGYMAAPLDGKSRMDESWQTVTV 399
Query: 319 RNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADDNAKM---GRGPSQPAPKF 372
RNERG +M+ ++ + LE+ + SGD + + T K+D + G+ P +
Sbjct: 400 RNERGNQMVETAITQGRLEVGDIVRGSGDHQQLAIATTKSDALVQAMVGGKVQENGMPLW 459
Query: 373 VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+GN++A + V KG+ FARYS+DYH +RNY HV WG+ RA P +A +IV+ Y
Sbjct: 460 LGNIMATVLRKVSAKGIAFARYSIDYHIVRNYFHVLNEWGEHRARSSTPQFALEIVDEY 518
>gi|223996811|ref|XP_002288079.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
gi|220977195|gb|EED95522.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
Length = 419
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/426 (44%), Positives = 248/426 (58%), Gaps = 60/426 (14%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGRR----------K 107
+PAK+HCS+CGLC+T Y+ HV DACAFLG+GM R I+G+E VHGR R
Sbjct: 1 FPAKNHCSKCGLCETKYVTHVIDACAFLGEGMKRNIDGMEERVHGRRRNLNDFMSNNDDN 60
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ GV + + K + AQWTG VT IA+ ML+ GMV+AVVC+ S DD S
Sbjct: 61 NTADEARFGVMHSPMVLARGKQIPNAQWTGCVTGIAVSMLEAGMVDAVVCIASSGDDGWS 120
Query: 168 -PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVE-AAGVKRLLFCGVGCQVQV------- 218
P P+LART EEV+ +GVKP L+P+L L +E + VKRLLFCGVGC VQ
Sbjct: 121 NPEPILARTVEEVIRGRGVKPALAPSLRVLEELERSTDVKRLLFCGVGCAVQAFRAIEHE 180
Query: 219 --------------DN-----GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG- 258
DN RE L + + S E +T+L YEFMQD++VH+K+ +G
Sbjct: 181 LPLEEVYVLGTNCADNSPTPEAAREFLRRIVPDVSRE-KTILGYEFMQDFRVHVKY-EGI 238
Query: 259 ----HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 314
E +PYF LP + I+ SC +CFDYTNALAD+VVGYM P + SM Q Q
Sbjct: 239 NKILSYERLPYFSLPGDVAEFAISDSCLACFDYTNALADVVVGYMAAPLDSN-SMEQSYQ 297
Query: 315 YITVRNERGKEMLSLVKNLLEI------TPTISSGDRRPFVMETVKADDNAKM---GRGP 365
ITVRN RG+ M V++ LE + SG FV TV AD+ + G
Sbjct: 298 TITVRNSRGELM---VQSALEAGRLTLGSVATGSGSHESFVSATVSADNVVQAMVGGELK 354
Query: 366 SQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 425
++ P+FVGN++A + VGPKG+ FARYSLDYH +RNYLHV WG+ +P YA
Sbjct: 355 TEGMPRFVGNIVASVMRAVGPKGVNFARYSLDYHLLRNYLHVIDEWGEG-GKSMVPEYAT 413
Query: 426 KIVEMY 431
IV+ Y
Sbjct: 414 TIVKKY 419
>gi|147799603|emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]
Length = 240
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/198 (77%), Positives = 169/198 (85%), Gaps = 9/198 (4%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKDYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVE GV L +
Sbjct: 150 VQSDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEIDGVVIL---------R 200
Query: 218 VDNGTREGLDKFLKAASS 235
V NG L K SS
Sbjct: 201 VSNGPGRALGKSKATPSS 218
>gi|397613578|gb|EJK62303.1| hypothetical protein THAOC_17090 [Thalassiosira oceanica]
Length = 472
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 254/434 (58%), Gaps = 50/434 (11%)
Query: 50 SKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGR 105
S+PI P G +PAKDHCSRCGLC+T Y+++V DACAF+ GM R I+GLE VHGR R
Sbjct: 30 SRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDACAFINGGMKRNIDGLEETVHGRTR 89
Query: 106 RKDSLDDTYLGVHEELLYARKTKP-------VEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
D+ + + EE + ++P V GAQWTG V++IA+ ML++ V+AVVC+
Sbjct: 90 CIDNSINGDDSIAEERRFGVMSRPMMLGRGKVAGAQWTGAVSSIAVSMLESKKVDAVVCI 149
Query: 159 QSDPDDRLS-PRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQV 216
+ D S P P+LART ++VL +GVKP L+P+L L L +K+LL+CGVGC V
Sbjct: 150 ATGSDGGWSNPEPILARTVDDVLRGRGVKPALAPSLRILDELKSDESIKKLLYCGVGCSV 209
Query: 217 QVDNGTRE--GLDK--------------------FLKAA--SSEPETVLHYEFMQDYKVH 252
Q + GLDK FLK S VL YEFMQD++VH
Sbjct: 210 QAFRAIEDELGLDKVYVLGTACADNSPTPKAARDFLKKGIPSIGDSNVLAYEFMQDFRVH 269
Query: 253 LKHLDGH---IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 309
+K D +++PYF L + IA SC +CFDYTNALAD+VVGYMG P M
Sbjct: 270 VKVGDEKSPSYKKLPYFSLEPSVAEFAIADSCLACFDYTNALADVVVGYMGAPLVD--DM 327
Query: 310 TQHPQYITVRNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADDNA--KMGRG 364
++ Q ITVRN RG+EM+ ++ LE+ T G F M TV A+DN KM G
Sbjct: 328 DRNMQTITVRNNRGEEMIRCAIDGERLELGGTARGEGTHEKFAMSTV-ANDNLVNKMTGG 386
Query: 365 --PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPS 422
+ P FVGN+IA +GPKG+ FARYS+DYH +RNYLH R +G+ RAD +P
Sbjct: 387 DVKEKGMPPFVGNIIASIATKLGPKGVAFARYSIDYHILRNYLHCLREFGRDRADTMIPE 446
Query: 423 YAKKIVEMYNQNGQ 436
Y + I++ Y ++ Q
Sbjct: 447 YTRVIIKEYEESDQ 460
>gi|440755865|ref|ZP_20935066.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
gi|440173087|gb|ELP52545.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
Length = 295
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 192/307 (62%), Gaps = 37/307 (12%)
Query: 146 MLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK 205
ML G+VE VVCVQ+ +DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+K
Sbjct: 1 MLDRGLVEGVVCVQNTAEDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMK 60
Query: 206 RLLFCGVGCQVQ---------------------VDNGTREGLDKFLKAASSEPETVLHYE 244
RLL GVGCQ+Q VDN TR GL KFL+ S PETV+HYE
Sbjct: 61 RLLVIGVGCQIQALRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYE 120
Query: 245 FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 304
FMQD++VH KH DG +E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P
Sbjct: 121 FMQDFRVHFKHEDGSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPF- 179
Query: 305 TGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG 364
Q+I VRN+ GKEML LVK+ L +SSGDR+ V ++ A D
Sbjct: 180 -------GWQWIVVRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYDKGVT--- 229
Query: 365 PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYA 424
P + ++ I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YA
Sbjct: 230 ----LPMWAAKMMGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYA 284
Query: 425 KKIVEMY 431
KKIVE Y
Sbjct: 285 KKIVEQY 291
>gi|381160641|ref|ZP_09869873.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
gi|380878705|gb|EIC20797.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
Length = 453
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 217/422 (51%), Gaps = 63/422 (14%)
Query: 32 PSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMS 91
P+K + L +D R R +P CS CGLCD+ + + +C F+ +
Sbjct: 43 PAKGLREPTLLSKDERLRGRP----------KLCSDCGLCDSQFKPLMASSCTFVRQHVP 92
Query: 92 RIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGM 151
IE +HGR RR+ D+ G+ + AR +P GAQW+G+VT++ +L+TG
Sbjct: 93 EIE---QRLHGRERREG--DELRFGIFRAMYGARMRQPASGAQWSGMVTSLGAALLETGQ 147
Query: 152 VEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 211
VE V+ + P R +PRPVLARTP+ V A+ G KP LSPNL L V AAG+KRL F G
Sbjct: 148 VEGVITAAAAPGTRFAPRPVLARTPDAVRASAGNKPCLSPNLALLDEVRAAGIKRLAFIG 207
Query: 212 VGCQVQV-------------------------DNGTREGLDKFLKAASSEPETVLHYEFM 246
GCQVQ+ DN T L FL S PET++HYEFM
Sbjct: 208 TGCQVQILRAAEPQLREQMGLEHLDVIGIPCSDNVTYPDLQFFLTQVSRSPETIVHYEFM 267
Query: 247 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 306
QDY++ ++H DG IE V + P + L V +C SCFDY N+LAD+ +GYMG
Sbjct: 268 QDYRLWMRHDDGDIERVNFIDFPMDKLDGVFPSACLSCFDYANSLADITIGYMGA----- 322
Query: 307 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 366
Q++ VR ERG+ ML L+K LE S+GDR + ++ + P
Sbjct: 323 ---RLGWQWVLVRTERGQAMLDLIKPQLEFRELDSAGDRNRGMPRYIRM-----LAEPPG 374
Query: 367 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 426
+P PK + LIAF GP+GLEFAR ++ +RN ++ H P + ++
Sbjct: 375 KP-PKPIRRLIAFLQRRRGPRGLEFARAVIEMKLLRNLQYLR---------SHFPRFEQR 424
Query: 427 IV 428
+V
Sbjct: 425 VV 426
>gi|193214920|ref|YP_001996119.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088397|gb|ACF13672.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroherpeton thalassium ATCC 35110]
Length = 418
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 222/399 (55%), Gaps = 40/399 (10%)
Query: 65 CSRCGLCD--TYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC ++ +C F + + GLE+ + GR R +S +++ G+ ++
Sbjct: 24 CSSCGLCSVKSWPAKESIQSCVF---RVGWLGGLESELFGRERNPNSFEESRFGITKKRF 80
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
A+ P+ AQW+GI+T I + L++G VE VV VQ+ DD P+PVLA + +V A
Sbjct: 81 VAQLKNPIPHAQWSGIITRICTKALESGFVEGVVAVQNSQDDIFVPKPVLATSTADVFKA 140
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV------------------------ 218
KG KP L+P L +L +KRLL G C V +
Sbjct: 141 KGNKPALAPALLSLGEAYEKKLKRLLVVGAPCHVHILRDFVKRSPYLKDAEIYVLGIPCT 200
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN-DLVDVI 277
DN E L L+ SS +T+ HYEFMQD++VHLKH +G IE+VPYF LP + V
Sbjct: 201 DNVKPEKLRWILERISSSHQTLCHYEFMQDFQVHLKHDNGRIEKVPYFSLPQELSQIGVF 260
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
APSC SCFDY N+L+DL VGY+G P + Q++ +R E+G+E+L V++ L+
Sbjct: 261 APSCMSCFDYVNSLSDLTVGYLGAP----FMPNEKRQWVLLRTEKGEELLKFVEDELDTY 316
Query: 338 PTISSGDRRPFV-METVKADDNAKMG-RGPSQPA---PKFVGNLIAFFINLVGPKGLEFA 392
P +SGD R V M + + K+G + P++ P +VG LI + ++ GPKGLEFA
Sbjct: 317 PEETSGDAREAVKMNVERTIEQLKLGNKAPAKTGRRIPIWVGKLITYMMSKKGPKGLEFA 376
Query: 393 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
RY++D+H +RNY +V + +K + +P + K++E Y
Sbjct: 377 RYTIDFHILRNYYYVKLFYPEK-FETIVPKHVYKVLEEY 414
>gi|556606|gb|AAA50354.1| ORF, partial [Nostoc sp. PCC 7120]
Length = 265
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 169/264 (64%), Gaps = 31/264 (11%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQARQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLS---PNLNTLALVEAAGVKRLLFCGVGCQVQ------- 217
P PV+ARTP ++ KPTLS P N+ +G+KRLL GVGCQ+Q
Sbjct: 125 PMPVIARTPRRNTSSCVNKPTLSQTFPYWNS----RKSGMKRLLVIGVGCQIQALRAVEK 180
Query: 218 --------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
VDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+V
Sbjct: 181 KLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKV 240
Query: 264 PYFCLPANDLVDVIAPSCYSCFDY 287
P+F L N L DV APSC SCFDY
Sbjct: 241 PFFGLKTNQLKDVFAPSCMSCFDY 264
>gi|347756039|ref|YP_004863602.1| Coenzyme F420-reducing hydrogenase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347588556|gb|AEP13085.1| Coenzyme F420-reducing hydrogenase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 433
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 220/394 (55%), Gaps = 39/394 (9%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + HVK+ACAFL + + + LE V G RR + D+ Y G ++++L
Sbjct: 20 CSDCGICTSSLRPHVKEACAFL---VQKYDELELTVQGHARRAGT-DEVYFGPYKKILRV 75
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R+ +P+ GAQWTG+VTTIA+ L+ G+VE V+ ++P P+PVLARTPEEVLA +G
Sbjct: 76 RRQRPIAGAQWTGVVTTIAMRALEQGLVEGVILTGTEPGTLNKPQPVLARTPEEVLACRG 135
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNGTR 223
K LSP L + AAG+KR++ G CQ DN T
Sbjct: 136 NKFGLSPTLEKIDDAIAAGLKRVMVVGTPCQFHALRVIESTLPFDELWCLGILCSDNTTH 195
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 282
E FLK+ S P+TV+H EFM D+++ ++H +G +E++ + +P +++ D+IAPSC
Sbjct: 196 ENYMTFLKSVSRSPDTVVHMEFMPDFRLWMRHTNGEVEKLNFVEIPMHEIGPDLIAPSCR 255
Query: 283 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 342
CF+YTN+LADL VGYMG Q++ +RN +G +L L+++ +E++ S
Sbjct: 256 VCFNYTNSLADLSVGYMG-------GGMPDNQWLLIRNAKGWRLLDLIRDDVELSEPTES 308
Query: 343 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 402
G R M+ +++G+ ++ AP+ V LIAF GP+GLEFAR ++
Sbjct: 309 GS-RALAMKGFL----SQLGKPYTKGAPRPVKKLIAFLQRRFGPRGLEFARTRVEMKLAE 363
Query: 403 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
V R G + A +P YA +E Y G+
Sbjct: 364 GLFTVRRKAGHREA-LLVPRYAYVPLEKYVLPGE 396
>gi|288940912|ref|YP_003443152.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896284|gb|ADC62120.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Allochromatium vinosum DSM 180]
Length = 423
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 209/424 (49%), Gaps = 51/424 (12%)
Query: 30 SSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDG 89
+ PSK + L D R + +P CS CGLCD+ + AC F+ +
Sbjct: 11 TGPSKGLATISLLSSDERLKGRP----------KLCSDCGLCDSTLKGRMSSACIFVRNQ 60
Query: 90 MSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKT 149
+ IE +HGR RR D D+ G+H AR +P AQW+GIVT++ +L+
Sbjct: 61 TAEIE---QRLHGRARRPD--DERRFGIHRTQYAARMRRPNPQAQWSGIVTSLGARLLEQ 115
Query: 150 GMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLF 209
G VEAV+ + P R PVLARTP EVLA G KP LSPNL L V G+KRL F
Sbjct: 116 GRVEAVITTGAAPGTRFKSEPVLARTPAEVLATAGNKPCLSPNLRLLDQVREQGIKRLAF 175
Query: 210 CGVGCQVQV---------------------DNGTREGLDKFLKAASSEPETVLHYEFMQD 248
G CQV + DN T L+ FL S P+T++HYEFMQD
Sbjct: 176 IGTSCQVHMLRAVEAELGLEKLYVIGIPCSDNVTYPDLEYFLTQVSRSPQTIVHYEFMQD 235
Query: 249 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 308
+ + ++H DGH E V Y P + L + SC SCFDY N L DL VGYMG
Sbjct: 236 FSLWMRHEDGHKERVNYIDFPMDKLHGIFPSSCLSCFDYPNTLCDLTVGYMGA------- 288
Query: 309 MTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQP 368
Q++ R E G+E+ L++ LEI SSGDR + + A++ + P
Sbjct: 289 -ELGWQWVLARTEIGEELFELIRPDLEIGELTSSGDRTRGMPHYI-----ARLTQPPGAK 342
Query: 369 APKF-VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKI 427
P F V L+A+ G KGLEFAR ++ +RN +V + + A + +P + +
Sbjct: 343 KPPFLVRKLVAYMQRKKGSKGLEFARAIIEMKLLRNLNYVRSKFPRFEA-RVVPEHVYQT 401
Query: 428 VEMY 431
+E Y
Sbjct: 402 LEPY 405
>gi|163848106|ref|YP_001636150.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chloroflexus
aurantiacus J-10-fl]
gi|222526003|ref|YP_002570474.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|10198145|gb|AAG15211.1|AF288460_4 FrhB [Chloroflexus aurantiacus]
gi|163669395|gb|ABY35761.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449882|gb|ACM54148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus sp. Y-400-fl]
Length = 429
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 205/391 (52%), Gaps = 40/391 (10%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR RR D+ G++ +L
Sbjct: 38 CSDCGICTGELRPFMAQSCVFVNN---RAEEIERRLHGRNRRDG--DELLFGIYRDLRVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R PV AQW+G VT++ +L+ G+VE V+ + P R +P P+LARTP+EV A +G
Sbjct: 93 RMRPPVPDAQWSGAVTSLGALLLEHGLVEGVITTGAVPGTRYAPLPILARTPDEVRATRG 152
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTR 223
KP L+P L+ L V +G++R+ + G GCQV DN T
Sbjct: 153 NKPCLAPTLDVLTQVRQSGLRRIAYIGTGCQVHALRAIEDQLGLERLYVIGIPCTDNTTY 212
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 280
L +FL+ S PETV+H+EFMQD+++ LKH DG +E+V + L + L + V P+
Sbjct: 213 PDLQRFLQVVSRSPETVIHHEFMQDFRIWLKHEDGSVEKVNFVDLDVDRLGGQLGVFPPA 272
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
C SCFDY N L+DL +GYMG P + + Q+ +R ERG E+ L+++ +E I
Sbjct: 273 CLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLIRTERGAELYDLLRSHVEEREPI 328
Query: 341 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 400
S GDR T +M R P + P + L+AF GPKGLEFAR ++
Sbjct: 329 SGGDR------TRGMPAYIQMLRQPRKRPPWPIRQLVAFIQRRSGPKGLEFARSVIEMKL 382
Query: 401 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+RN V G+ + +P Y + + Y
Sbjct: 383 LRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|189347280|ref|YP_001943809.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189341427|gb|ACD90830.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 416
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 211/415 (50%), Gaps = 51/415 (12%)
Query: 54 PPGGTYPAKDH--CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
PP P D CSRCGLC + + A +C F + E + GR R
Sbjct: 4 PPKLENPRFDEPLCSRCGLCMGNAWATAESLKSCVF---NTGWLGAHEERLFGRTRNMHD 60
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D+ G+ E A KP+EGAQW+GI+T I+ E L+TG+V+ VV +Q P+
Sbjct: 61 ADELRFGISRERFNAVMKKPLEGAQWSGIITAISTEALQTGLVDGVVTLQG---TTFQPK 117
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV----------- 218
VLA T EE+ AA+G KP LSP L L VK+LL G C V V
Sbjct: 118 AVLATTAEEIHAARGNKPVLSPVLQALHTAWKKKVKKLLVVGASCHVHVLRDFAATHPWL 177
Query: 219 -------------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY 265
DN L + S P+TVL++EFMQDYKVH+ H G +E++P+
Sbjct: 178 DGIELLVVGIPCTDNLEPAHLKWVFRHISRSPDTVLNFEFMQDYKVHIVHSTGKVEKIPF 237
Query: 266 FCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 324
F LPA L V V + SC SCFDY N+LAD+ VGY G P YT Q+I +R ++GK
Sbjct: 238 FSLPAAVLKVGVFSNSCMSCFDYINSLADITVGYFGAP-YTA---DGKEQWILIRTDKGK 293
Query: 325 EMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMG-------RGPSQPAPKFVGNLI 377
++ LVKN + + P SGD VKA +G G + P F G L+
Sbjct: 294 KLFDLVKNDISVRPETGSGDS----FGAVKASIQPTIGPILQPHLLGDRRSMPLFFGKLL 349
Query: 378 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+ GP+G+EFARYS+D H +RNY V R + +R D +P + + +V++YN
Sbjct: 350 SALKAKKGPRGIEFARYSIDIHALRNYFFV-RHYTPERLDVLVPEHIRHLVKLYN 403
>gi|344342959|ref|ZP_08773829.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
gi|343805511|gb|EGV23407.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
Length = 420
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 217/436 (49%), Gaps = 55/436 (12%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
S++ + PSK + L D R + +P CS CGLCD+ + A
Sbjct: 3 QSAAPVAEGPSKGMGQISLLSNDDRLKGRP----------RLCSDCGLCDSALKPQMTQA 52
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + + + +E + GR R D+ G + AR P GAQW+G+VTT+
Sbjct: 53 CMFVNN---QTDAIEQRLFGRSRGDG--DELLFGCYRATYAARMRAPRPGAQWSGMVTTL 107
Query: 143 AIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 202
+L+ G VEAV+ + P R +P+LARTPEEVLA G KP+LSPNL L LV
Sbjct: 108 GARLLERGEVEAVITTAAAPGTRFKAQPILARTPEEVLATAGNKPSLSPNLGLLDLVREQ 167
Query: 203 GVKRLLFCGVGCQVQV---------------------DNGTREGLDKFLKAASSEPETVL 241
G+KRL F G GCQV DN + L+ FL+ S P TV+
Sbjct: 168 GIKRLAFIGTGCQVHALRAIEAELGLEALYVIGIPCSDNVSYPDLEYFLEQISRSPATVV 227
Query: 242 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 301
H+EFMQD+ + L+H DG +E V Y P + L + +C SCFDY NAL+DL +GYMG
Sbjct: 228 HHEFMQDFSLWLRHEDGTVERVNYIDFPMDKLHGIFPSACLSCFDYPNALSDLTIGYMGA 287
Query: 302 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PFVMETVKADDN 358
Q++ R ERG++M +++ LE GDR P ME + N
Sbjct: 288 --------ELGWQWVMARTERGEQMFEMLRPDLEFGTLTEGGDRTRGMPRFMERL----N 335
Query: 359 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADK 418
G G +P P + L+ + GP+GLEFAR ++ +RN HV R+ +++ +
Sbjct: 336 HPPGTG--RP-PLLIRKLVVWLQRNRGPRGLEFARAVIEMKLLRNLNHV-RSKFERQESR 391
Query: 419 HMPSYAKKIVEMYNQN 434
+P + + + Y ++
Sbjct: 392 VVPGFVYRALAPYAEH 407
>gi|390950184|ref|YP_006413943.1| coenzyme F420-reducing hydrogenase subunit beta [Thiocystis
violascens DSM 198]
gi|390426753|gb|AFL73818.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiocystis
violascens DSM 198]
Length = 421
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 210/435 (48%), Gaps = 55/435 (12%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
++++ PSK + L D R + +P CS CGLCD+ + A
Sbjct: 4 AATAPLEEGPSKGFGQITLLSHDDRLKGRP----------RLCSDCGLCDSALKPSMPQA 53
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + R + +E +HGR R+ D D+ G++ AR +P AQW+GIVT +
Sbjct: 54 CMFVDN---RTQAIEQRLHGRNRQPD--DELRFGIYRAQYAARMRRPNPQAQWSGIVTAL 108
Query: 143 AIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 202
+L+ G VEAV+ + P R +P+LART EVLA G KP LSPNL+ L V
Sbjct: 109 GARLLEQGKVEAVITTGAAPGTRFKAQPILARTAAEVLATAGNKPCLSPNLSLLDSVREQ 168
Query: 203 GVKRLLFCGVGCQVQV---------------------DNGTREGLDKFLKAASSEPETVL 241
G+KRL G CQV DN E L FL S PETV+
Sbjct: 169 GIKRLALIGTSCQVHALRAVEAELGLEQLYVIGIPCSDNVAYEDLTYFLTQVSRSPETVV 228
Query: 242 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 301
H+EFMQD+ + ++H DGH+E + + P + L + +C SCFDY NAL+DL VGYMG
Sbjct: 229 HHEFMQDFSLWMRHEDGHVERLNFVDFPMDKLHGIFPSACLSCFDYPNALSDLTVGYMGA 288
Query: 302 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PFVMETVKADDN 358
Q++ R ERG+E+ L++ LEI GDRR P ME +
Sbjct: 289 ELGW--------QWVLARTERGEELFELMRPDLEIGELTERGDRRRGMPRFMERLTHPPG 340
Query: 359 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADK 418
AK P + L+A GP GLEFAR ++ +RN +V + + +
Sbjct: 341 AKR-------PPFLIRKLVAMLQRRKGPGGLEFARAVIEMKLLRNLNYVRGKFARLEP-R 392
Query: 419 HMPSYAKKIVEMYNQ 433
+P + + +E Y +
Sbjct: 393 VVPYHVYQTLEPYAE 407
>gi|219850322|ref|YP_002464755.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219544581|gb|ACL26319.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aggregans DSM 9485]
Length = 429
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 204/391 (52%), Gaps = 40/391 (10%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR R D+ G++ EL
Sbjct: 38 CSDCGICTGDLRPLMAQSCVFVNN---RAEEIERRLHGRNRHDG--DELLFGIYRELHVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R PV GAQW+G VT++ +L+ G+VE V+ + P R +P P+LARTP+EV A +G
Sbjct: 93 RMKPPVPGAQWSGAVTSLGALLLERGLVEGVITTGAVPGTRYAPLPILARTPDEVRATRG 152
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTR 223
KP L+P L+ L V AG++R+ + G GCQV DN T
Sbjct: 153 NKPCLAPTLDVLTQVRQAGLRRIAYIGTGCQVHALRAIEDQLGLERLYVIGIPCTDNTTY 212
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 280
L +FL+ S P+TV+H+EFMQD+++ LKH DG +E+V + L L + V P+
Sbjct: 213 PDLQRFLQVVSRSPDTVVHHEFMQDFRIWLKHEDGSVEKVNFVDLDVARLGGEIGVFPPA 272
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
C SCFDY N L+DL +GYMG P + + Q+ VR ERG E+ +L++ +E I
Sbjct: 273 CLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLVRTERGVELFNLLRPYIEERAPI 328
Query: 341 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 400
S GDR T +M R P + P + L+AF GPKGLEFAR ++
Sbjct: 329 SGGDR------TRGMPAYIQMLRKPRRRPPWPIRQLVAFIQRRSGPKGLEFARSVIEMKL 382
Query: 401 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+RN V G+ + +P Y + + Y
Sbjct: 383 LRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|309790871|ref|ZP_07685415.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG-6]
gi|308227158|gb|EFO80842.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG6]
Length = 408
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 207/391 (52%), Gaps = 40/391 (10%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + Y + C F+ + R E +E +HGR R + D+ G++
Sbjct: 20 CSDCGICSSSYRPMLPQVCMFVEN---RAEQIERKLHGRNR--NDGDELLFGIYRSRHVI 74
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R KP AQW+G+VT++ +L+ GMVEAV+ + P +P PVLARTPEEV A+
Sbjct: 75 RMAKPNLDAQWSGVVTSLGALLLERGMVEAVITTMAVPGTHHAPLPVLARTPEEVRASAR 134
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTR 223
KP LSPNL+ L V +GVKRL F G CQV DN
Sbjct: 135 NKPCLSPNLDLLDQVRESGVKRLAFIGTSCQVHALRAIEDHLGLEKLYVIGIPCTDNVAY 194
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 280
L +FL+ AS P+T++H+EFMQD++V ++H DGHIE++ Y L + L + + +
Sbjct: 195 PDLLRFLQIASKSPDTIVHHEFMQDFRVWMRHEDGHIEKINYVDLDVSALGGELAIFPAA 254
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
C SCFDY N+LAD+ VGY+ P + + Q+ VR + G+E+ L++ LE+
Sbjct: 255 CLSCFDYQNSLADITVGYLSAP----LPPPERWQWTMVRTKAGEELFELIRPFLEVGTLS 310
Query: 341 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 400
G+R+ V E V +M + P + P + LIA+ GP+G+EFAR ++
Sbjct: 311 ERGNRQVGVSEYV------RMLKRPRKRPPFPIRKLIAWMQRNRGPRGMEFARSVIEMKL 364
Query: 401 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+RN +V A G+ + +P Y + + Y
Sbjct: 365 LRNLQYVRDAHGRL-ERRIVPDYVYRALATY 394
>gi|344337911|ref|ZP_08768844.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
gi|343801965|gb|EGV19906.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
Length = 428
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 200/394 (50%), Gaps = 47/394 (11%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG CD+ + C F+ + + G+E +HGR R+ ++ G++ + A
Sbjct: 36 CSDCGFCDSSLKLLMSQTCTFVRN---QTRGIEQRLHGRSRQGG--EEGRFGIYRAMYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R +P AQW+G+VTT+ +L+ G V+AV+ + P R +P+LARTP+EVLA G
Sbjct: 91 RMARPNPHAQWSGMVTTLGARLLEQGKVDAVITTAAAPGTRFKAQPILARTPQEVLATAG 150
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTR 223
KP LSP L+ + V G+KRL G GCQV DN +
Sbjct: 151 NKPCLSPALSLIDAVREQGIKRLAVVGTGCQVHQLRAAEAELGLERLYVIGIPCSDNVSY 210
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 283
L+ FL S PETV+H+EFMQD+ + ++H DGH+E + Y P + L + SC S
Sbjct: 211 PDLEYFLTQVSKSPETVVHHEFMQDFSLWMRHEDGHVERLNYIDFPMDKLHGIFPSSCLS 270
Query: 284 CFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 343
CFDY N L+D+ +GYMG P Q++ VR G+E+ +++ LEI SG
Sbjct: 271 CFDYANTLSDITIGYMGAPLGW--------QWVMVRTPTGEELFEMLRPELEIGALTESG 322
Query: 344 DRR---PFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFARYSLDYH 399
DR P ME ++ P Q P + L+A GPKGLEFAR ++
Sbjct: 323 DRNRGMPRYME--------RLSHPPGQKRPPMPIRKLVAMLQRTRGPKGLEFARAVIEMK 374
Query: 400 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQ 433
+RN +V R+ K + +P + + +E Y +
Sbjct: 375 LLRNLNYV-RSKFPKFESRVVPYHVYETLEPYAE 407
>gi|119356035|ref|YP_910679.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353384|gb|ABL64255.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 428
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 196/378 (51%), Gaps = 56/378 (14%)
Query: 65 CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS+CGLC + + + ++C F +E E + GR R D D+ G+ +
Sbjct: 31 CSKCGLCMGNAWPVKESLESCVF---RCGWVENHEKRIFGRVRNPDDSDELRFGISLKRF 87
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
A KPV GAQW+GI+T I+ L+T +V+AV+ + +P L P+ VLA+T +++ A
Sbjct: 88 NATLKKPVNGAQWSGIITRISTMALQTNLVDAVLTLHGEP---LQPKAVLAKTAQDIHEA 144
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV------------------------ 218
+G KP LSP L L +RLL G C V +
Sbjct: 145 RGNKPVLSPVLQALHTAYREKTRRLLVVGAACHVHMVRDFTRKSPYFADLDLYIVGIPCT 204
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVI 277
DN L + S PETV+++EFMQDY+VH+ H G +E++P+FCLP+ + V V
Sbjct: 205 DNLEPSHLQWVFRNISKNPETVINFEFMQDYRVHILHKAGKVEKIPFFCLPSAVMKVGVF 264
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
SC SCFDY N+L+D+ VGY+G P S + Q+I VR ERG+++L L+ + +E +
Sbjct: 265 PNSCLSCFDYINSLSDITVGYLGAP----YSKNRKTQWIIVRTERGEKLLDLINDEIETS 320
Query: 338 PTISSGDR--------RPFVMETV---KADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 386
P + GD +P +M + K DD M PK++G ++ GP
Sbjct: 321 PEVFFGDSHSAVQAALQPTLMPILQPEKLDDRKAM--------PKWLGIYLSRKKAKSGP 372
Query: 387 KGLEFARYSLDYHTIRNY 404
G EFA+YS+D H IRN+
Sbjct: 373 GGTEFAKYSIDIHAIRNF 390
>gi|147799602|emb|CAN75142.1| hypothetical protein VITISV_038426 [Vitis vinifera]
Length = 366
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 144/250 (57%), Gaps = 71/250 (28%)
Query: 200 EAAGVKRLLFCGVGCQVQ---------------------VDNGTREGLDKFLKAASSEPE 238
+AAGVKRLLFCGVGCQVQ VDNGTREGLDKFL AASSEPE
Sbjct: 94 KAAGVKRLLFCGVGCQVQALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPE 153
Query: 239 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 298
TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALA+
Sbjct: 154 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALAE----- 208
Query: 299 MGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDN 358
KY + + + + IT + G + K D
Sbjct: 209 ----KYCNVLLLREVTWYAY-----------------ITSGLGGGIHGCAKIPWSKHDTT 247
Query: 359 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK---- 414
+ + SQ +GPKGLEFARYSLDYHTIRNY++VNR WGK+
Sbjct: 248 STI--CDSQ----------------IGPKGLEFARYSLDYHTIRNYIYVNRMWGKQSGVC 289
Query: 415 --RADKHMPS 422
R H P+
Sbjct: 290 KTRVQGHSPT 299
>gi|374623268|ref|ZP_09695781.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
gi|373942382|gb|EHQ52927.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
Length = 398
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 199/396 (50%), Gaps = 38/396 (9%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P +D C+ CGL T AC F+ R + LET VHGR R D D+ + G +
Sbjct: 8 PHRDLCTDCGLSRTADPRRCGRACQFI---HPRYDRLETQVHGRARNPDQEDELFFGPYR 64
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L A P +GAQWTGI T I +L+TG V+AV+ + +DP DR P+P+L E++
Sbjct: 65 RMLQAAMNTPRDGAQWTGITTRIGERLLETGQVDAVLTMTADPQDRWRPQPILVTRAEDM 124
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------------- 218
+G++ +P L L A G +RL G+ CQ+
Sbjct: 125 ARCRGMRMGYAPLLAHLEPALAQGYRRLAVIGLPCQIYALRAIEPELDLDALHVIGTPCS 184
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVI 277
DN T E +FL + PETV + EF DY V L+ DG ++ +P+ LP + L D
Sbjct: 185 DNTTTEHFHEFLALLADRPETVTYLEFRADYHVELRFEDGRVQTIPFLKLPISKLPRDFF 244
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
+C +C DYTN LAD+ VGYM + Q++ VRNE+G+ +L L+ + +
Sbjct: 245 PLTCQTCVDYTNVLADITVGYMA---------GRGEQWLVVRNEKGEALLDLLGDEVRTA 295
Query: 338 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 397
P S+G R+ V +K + A G P + P + L AF + +GP+GLEFAR ++
Sbjct: 296 PCTSAGKRQGPVKGFMKNTERAAGGL-PLRGMPDWARPLAAFLMPRIGPRGLEFARARVE 354
Query: 398 YHTIRNYLHVNRAWGKKRADKHM-PSYAKKIVEMYN 432
+ LH+ RA + KHM P + ++V+ Y
Sbjct: 355 MKAVETVLHLRRAQPGRM--KHMIPDHVWQLVKPYE 388
>gi|345873334|ref|ZP_08825247.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
gi|343917293|gb|EGV28098.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
Length = 424
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 202/392 (51%), Gaps = 41/392 (10%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CGLCD+ + AC F+ + + + +E +HGR R+ D+ G+H A
Sbjct: 36 CSDCGLCDSALSQMMPQACVFVRN---QTQSIEQRLHGRNRQPG--DELRFGIHRAQYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R +P AQW+G++TT+ +L+ G VEAV+ + P R PVLARTPEEVLA G
Sbjct: 91 RMRRPNPKAQWSGMITTLGARLLEQGKVEAVITTGAAPGTRFKAEPVLARTPEEVLATAG 150
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDNGTR 223
KP LSPNLN + + G+KRL F G CQV DN T
Sbjct: 151 NKPCLSPNLNLIDQIRDQGIKRLAFIGTSCQVHSLRAIEAELGLERLYVIGIPCSDNVTY 210
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 283
L+ FL S P+TV+H+EFMQD+ + L+H +G +E V Y P + L + +C S
Sbjct: 211 PDLEYFLTQISRSPKTVVHHEFMQDFSLWLRHENGKVERVNYIDFPMDKLHGIFPSACLS 270
Query: 284 CFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 343
CFDY N+L DL VGYMG Q++ VR E G+E+L L+K LE + G
Sbjct: 271 CFDYPNSLCDLTVGYMGA--------ELGWQWVLVRTETGEELLELLKPDLEFSELTEGG 322
Query: 344 DRRPFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFARYSLDYHTIR 402
DR + + + A++ P P F + L+A+ GPKGLEFAR ++ +R
Sbjct: 323 DRSRGMPKFI-----ARLTHPPGAKKPPFLIRRLVAYLQRKKGPKGLEFARAIIEMKLLR 377
Query: 403 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQN 434
N +V + + + + +P + + +E Y +
Sbjct: 378 NLNYVRSKFARVES-RVVPYHVYQALEPYAET 408
>gi|254282622|ref|ZP_04957590.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
gi|219678825|gb|EED35174.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
Length = 412
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 193/395 (48%), Gaps = 36/395 (9%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++ C+ CG+ T AC F+ + LE VHGR R + D+ + GV
Sbjct: 6 PHRNLCTDCGISRTEDPDRCGRACQFIRPDYA---ALEQRVHGRTRDLERGDERFFGVTR 62
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L AR+ P E AQWTGI T I ++L+T V V+C+ DP+D P+P L P+ +
Sbjct: 63 AMLRARRNPPAENAQWTGITTLIGQKLLETEAVSGVLCIGPDPEDSWKPQPRLITEPDAM 122
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------------- 218
+G++ +P L L AAG +RL G+ CQ+
Sbjct: 123 AGCRGMRMGYAPLLALLEPAIAAGHRRLAVIGIPCQIYALRALEEELGLERLYVIGTPCS 182
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVI 277
DN T E FL+ +PE + + EF+ D+ V L+ DG +P+ LP DL D
Sbjct: 183 DNTTTENFHHFLEKLDDKPEDITYLEFLPDFHVELRFTDGRKRRIPFLMLPIADLPKDFF 242
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
+C +C DYTNALAD+ VGYMG Q++ RN RG E+LSL+++ L +
Sbjct: 243 PLTCRTCVDYTNALADITVGYMG---------GSGEQWLITRNPRGVELLSLIEDELVLA 293
Query: 338 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 397
P SSG+RR V ++ A G P + P ++ ++A + + GPKGLEFAR L+
Sbjct: 294 PPTSSGNRRSAVAGFIENTRRA-CGGLPLRRMPGWLRPIVARLMPITGPKGLEFARTRLE 352
Query: 398 YHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+ LH+ R KR +P Y + Y+
Sbjct: 353 MKAAESVLHLRRE-APKRMRHMLPDYIWTLTAPYD 386
>gi|86751131|ref|YP_487627.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
gi|86574159|gb|ABD08716.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
Length = 410
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 197/392 (50%), Gaps = 36/392 (9%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
++ C+ CG+ AC F+ +E VHGR R D+ + G H +
Sbjct: 22 RELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSKPDEAFFGPHRRM 78
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
L A +P EGAQWTGI T IA +L+TG V+AV+ + DP D+ P PVL +PE +
Sbjct: 79 LQAAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPADKWKPMPVLVTSPEGMAQ 138
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DN 220
+G++ +P+L L AAG KR+ G+ CQV DN
Sbjct: 139 CRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLERKLGFERLYVIGTPCSDN 198
Query: 221 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 279
T E +FL S PET+ + EF DY V L+ DG ++ +P+ LP + L D
Sbjct: 199 TTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQAIPFLLLPISKLKPDFFPI 258
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 339
+C +C DYTN LAD+ VGYM + Q++ VRN+RG+E+L L+ + + ++
Sbjct: 259 TCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNQRGEELLDLLGDEVRLSEP 309
Query: 340 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 399
S+G+R V +K + A G P + P ++ + + + VGP+GLEF R ++
Sbjct: 310 TSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEFGRARVEMK 368
Query: 400 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+ LH+ R + K++ +P++ +V+ Y
Sbjct: 369 AVETVLHLRRNY-KQKIKNMVPAHVWALVKPY 399
>gi|39934573|ref|NP_946849.1| coenzyme F420 hydrogenase subunit beta [Rhodopseudomonas palustris
CGA009]
gi|39648422|emb|CAE26943.1| possible coenzyme F420 hydrogenase beta subunit [Rhodopseudomonas
palustris CGA009]
Length = 409
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 203/405 (50%), Gaps = 36/405 (8%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + ++ A +P EGAQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 70 FFGPYRRMVQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
PE + +G++ +P+L + AAG KRL GV CQ+
Sbjct: 130 TKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 189
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL S +PET+ + EF DY V L+ DG+++ +P+ LP +
Sbjct: 190 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAIPFLLLPISK 249
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 250 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLKLLG 300
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+G+EF
Sbjct: 301 DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGIEF 359
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 360 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|115523321|ref|YP_780232.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Rhodopseudomonas palustris BisA53]
gi|115517268|gb|ABJ05252.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris BisA53]
Length = 409
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 198/401 (49%), Gaps = 36/401 (8%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ + AC F+ + +E VHGR R D+
Sbjct: 14 PPLAEAAPRDLCTDCGVSRSSDPKQCGQACQFIKPDYT---AMELQVHGRNRDSARPDEE 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G +L A +P EGAQWTGI + + +L+TG VEAV+ + DP D+ P PV+
Sbjct: 71 FFGPFRRMLRAAMKQPREGAQWTGITSRLGERLLETGAVEAVLTMAQDPADKWKPMPVIV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
P+ + +G++ +P L+ L A G KR+ G+ CQ+
Sbjct: 131 TDPKAMAQCRGMRMGYAPLLSLLEPARARGFKRIAVIGIPCQIYALRQLEKSLGFEKIYV 190
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL S +P+T+ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 VGTPCSDNTTTENFHGFLDLLSDQPDTITYLEFRADYHVELRFDDGRVKEIPFLLLPISK 250
Query: 273 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L P +C +C DYTN LAD+ VGYMG Q Q++ VRNERG+E+L L+
Sbjct: 251 LPSTFFPITCRTCVDYTNTLADITVGYMG---------GQGEQWLLVRNERGEEILKLLG 301
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ ++++ S+G R V +K + A G P + P ++ + + + VGP+GLEF
Sbjct: 302 DEVKLSEPGSAGKRAAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEF 360
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
AR L+ + LH+ R + +R +P + +V+ Y
Sbjct: 361 ARARLEMKAVETVLHLRRNY-PQRMKNMIPDHVWALVKPYG 400
>gi|209963491|ref|YP_002296406.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
gi|209956957|gb|ACI97593.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
Length = 423
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 195/395 (49%), Gaps = 38/395 (9%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ T AC F+ + G+ET VHGR R + + G ++ A
Sbjct: 25 CTDCGISRTTTPGRCGHACQFIRPDYA---GMETQVHGRSRDPSRPGELHFGPFRRMVRA 81
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
P GAQWTGI T IA +L+TG V+AV+ + DPDD+ P PVL PE + +G
Sbjct: 82 AMATPRPGAQWTGITTRIAERLLETGAVDAVLTMAPDPDDKWRPVPVLVTKPEGMARCRG 141
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNGTR 223
++ +P L L G +RL G+ CQV DN T
Sbjct: 142 MRMGYAPLLALLEPARERGYRRLAVVGIPCQVHALRRLEAELGFERLYVIGIPCSDNTTT 201
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 282
E +FL S PET+ + EF D+ V L+ DG ++E+P+ LP + L D +C
Sbjct: 202 ERFHQFLNLLSDRPETITYLEFRADFYVELRFDDGRVKEIPFLLLPISKLPTDFFPLTCR 261
Query: 283 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 342
+C DYTN LAD+ VGYMG Q Q++ VRNERG+E+LSL+ + + ++ S+
Sbjct: 262 TCVDYTNVLADITVGYMG---------GQGEQWLLVRNERGEELLSLLGDEVRLSEPGSA 312
Query: 343 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 402
G R+ V ++ A G P + P ++ L+ + + VGPKGLEFAR ++
Sbjct: 313 GKRQGPVKGFIENTKRAAGGL-PLRQMPDWLRPLVGWLMPKVGPKGLEFARARVEMKASE 371
Query: 403 NYLHVNRAWGKKRADKHM-PSYAKKIVEMYNQNGQ 436
LH+ R + R KHM P + ++V Y +
Sbjct: 372 TVLHLRRE--QPRRMKHMVPPHVWELVRPYGLEAE 404
>gi|192290086|ref|YP_001990691.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192283835|gb|ACF00216.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris TIE-1]
Length = 409
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 202/405 (49%), Gaps = 36/405 (8%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + ++ A +P E AQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 70 FFGPYRRMVQAAMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
PE + +G++ +P+L + AAG KRL GV CQ+
Sbjct: 130 TKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 189
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL S +PET+ + EF DY V L+ DG+++ +P+ LP +
Sbjct: 190 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAIPFLLLPISK 249
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 250 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLKLLG 300
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+G+EF
Sbjct: 301 DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGIEF 359
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 360 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|316935327|ref|YP_004110309.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603041|gb|ADU45576.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris DX-1]
Length = 407
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 203/405 (50%), Gaps = 38/405 (9%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR S D+
Sbjct: 13 PPLNQPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPT---MERRVHGRD--SGSGDEA 67
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + +L A +P EGAQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 68 FFGPYRRMLQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 127
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
PE + +G++ +P+L L AAG KRL GV CQ+
Sbjct: 128 TKPEGMAQCRGMRMGYAPSLALLEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 187
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL S +PET+ + EF DY V ++ DG ++ VP+ LP +
Sbjct: 188 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFCADYHVEMRFDDGKVKRVPFLLLPISK 247
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 248 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLRLLG 298
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ ++++ S+G+R V +K + A G P + P ++ L+ + + VGP+G+EF
Sbjct: 299 DEVKLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPLMGWLMPKVGPRGIEF 357
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 358 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 401
>gi|91978240|ref|YP_570899.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB5]
gi|91684696|gb|ABE40998.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB5]
Length = 410
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 198/400 (49%), Gaps = 36/400 (9%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R D+
Sbjct: 14 PPLNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSRPDEF 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G +L A +P +GAQWTGI T I +L+TG V+AV+ + DP D+ P PVL
Sbjct: 71 FFGPFRRMLQAAMKEPRDGAQWTGITTRIGERLLETGAVDAVLTMAQDPADKWKPMPVLV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
PE + +G++ +P+L L AAG KR+ G+ CQV
Sbjct: 131 TKPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLEQKLGFERLYV 190
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL S +PET+ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 IGTPCSDNTTTENFHGFLDLLSDKPETITYLEFRADYHVELRFTDGRVQEIPFLLLPISK 250
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DYTN LAD+ VGYM + Q++ VRNERG+E+L+L+
Sbjct: 251 LKPDFFPITCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNERGEELLNLLG 301
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+GLEF
Sbjct: 302 DEVRLSEPTSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEF 360
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
R ++ + LH+ R + K++ +P++ +V+ Y
Sbjct: 361 GRARVEMKAVETVLHLRRNY-KQKIKNMVPAHVWALVKPY 399
>gi|194337716|ref|YP_002019510.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310193|gb|ACF44893.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pelodictyon phaeoclathratiforme BU-1]
Length = 391
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 182/348 (52%), Gaps = 51/348 (14%)
Query: 93 IEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMV 152
+E E + GR R D D+ G+ + A KPV GAQW+GI+T I+ L+T +V
Sbjct: 21 VENHEKRIFGRVRNPDDSDELRFGISLKRFNATLKKPVNGAQWSGIITRISTMALQTNLV 80
Query: 153 EAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 212
+AV+ + +P L P+ VLA+T +++ A+G KP LSP L L +RLL G
Sbjct: 81 DAVLTLHGEP---LQPKAVLAKTAQDIHEARGNKPVLSPVLQALHTAYREKTRRLLVVGA 137
Query: 213 GCQVQV------------------------DNGTREGLDKFLKAASSEPETVLHYEFMQD 248
C V + DN L + S PETV+++EFMQD
Sbjct: 138 ACHVHMVRDFTRKSPYFADLDLYIVGIPCTDNLEPSHLQWVFRNISKNPETVINFEFMQD 197
Query: 249 YKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGI 307
Y+VH+ H G +E++P+FCLP+ + V V SC SCFDY N+L+D+ VGY+G P
Sbjct: 198 YRVHILHKAGKVEKIPFFCLPSAVMKVGVFPNSCLSCFDYINSLSDITVGYLGAP----Y 253
Query: 308 SMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDR--------RPFVMETV---KAD 356
S + Q+I VR ERG+++L L+ + +E +P + GD +P +M + K D
Sbjct: 254 SKNRKTQWIIVRTERGEKLLDLINDEIETSPEVFFGDSHSAVQAALQPTLMPILQPEKLD 313
Query: 357 DNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 404
D M PK++G ++ GP G EFA+YS+D H IRN+
Sbjct: 314 DRKAM--------PKWLGIYLSRKKAKSGPGGTEFAKYSIDIHAIRNF 353
>gi|90422756|ref|YP_531126.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB18]
gi|90104770|gb|ABD86807.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB18]
Length = 409
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 207/410 (50%), Gaps = 43/410 (10%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A++ C+ CG+ T AC F+ +E VHGR R D+
Sbjct: 14 PPLAEPVARELCTDCGVSRTSDPKQCGQACQFIKPDYP---AMELRVHGRVRDPAKPDEA 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G ++ A +P +GAQWTGI T I +L+TG V+AV+ + DPDD+ P PV+
Sbjct: 71 FFGPFRRMVRAAMKQPRQGAQWTGITTMIGERLLQTGAVDAVLTMAQDPDDKWKPMPVIV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
E + A +G++ +P L+ L AG KR+ G+ CQ+
Sbjct: 131 TKAEGMKACRGMRMGYAPLLSLLEPARDAGHKRIAVIGIPCQIYALRQLEQKLGFEKLYA 190
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E +FL S +P+++ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 IGTPCSDNTTTESFHQFLDLLSDKPDSITYLEFRADYHVELRFDDGRVKEIPFLLLPISK 250
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DYTN LAD+ VGYMG Q Q++ +RNERG+E+L ++
Sbjct: 251 LPPDFFPMTCRTCVDYTNTLADITVGYMG---------GQGEQWLLIRNERGEELLRVLG 301
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLVGPKGL 389
+ + ++ S+G R V +K N ++ G P + P ++ L+ + + VGP+GL
Sbjct: 302 DEVRLSEPGSAGKRTAPVKGFMK---NVELAAGGLPVRGMPNWLRPLMGWLMPKVGPRGL 358
Query: 390 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 436
EFAR ++ I + LH+ R + +R +P++ +V+ Y Q+G+
Sbjct: 359 EFARTRVEMKAIESVLHLRRQY-PQRIKNMVPAHVWALVKPYGIEPQDGE 407
>gi|219886623|gb|ACL53686.1| unknown [Zea mays]
gi|414869975|tpg|DAA48532.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869976|tpg|DAA48533.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869977|tpg|DAA48534.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869978|tpg|DAA48535.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 215
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 111/131 (84%), Gaps = 1/131 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRG RK+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRG-RKEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSP 168
VQ P+ P
Sbjct: 162 VQRHPNKNQMP 172
>gi|384262343|ref|YP_005417530.1| coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
gi|378403444|emb|CCG08560.1| Coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
Length = 397
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 199/404 (49%), Gaps = 36/404 (8%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
T PA+ C+ CG+ + AC F+ +R LE +HGR R + D+ + G
Sbjct: 6 TAPARALCTDCGVSRSSDPRRCGRACQFIHPDYAR---LEARIHGRARDPERADELFFGP 62
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
+ ++ A +P EGAQWTGI T +A +L++G VEAV+ + +DP DR P P L P
Sbjct: 63 YTAMVQAALKEPREGAQWTGITTRLAERLLESGQVEAVLAMAADPADRWRPVPTLVTDPA 122
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------------------- 217
++ +G++ +P L L A G++RL GV CQ+
Sbjct: 123 DMKRCRGMRMGYAPLLAELEPARARGIRRLAVIGVPCQIYPLRELEESLGFDEITVIGIP 182
Query: 218 -VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VD 275
DN T E +FL + PETV + EF+ +Y V ++ DG + +P+ LP + L D
Sbjct: 183 CSDNTTTENFHRFLGVLTPAPETVTYLEFLANYHVEMRFTDGRVRHIPFLKLPLSTLPAD 242
Query: 276 VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLE 335
+C +C DYTNALADL VGYMG + Q++ VRN RG+ +L L+ + +
Sbjct: 243 FFPLTCRACVDYTNALADLTVGYMG---------GRGEQWVLVRNARGQAVLDLLGDEVR 293
Query: 336 ITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYS 395
++ S+G R V + + A G P + P + ++A+ + GP+GLEFAR
Sbjct: 294 LSAPTSAGKRFSAVKGFLANVERAAGGL-PLRSMPDWARPIVAWLMPRTGPRGLEFARTR 352
Query: 396 LDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 439
++ + +H+ + + KR +P + +V Y D+
Sbjct: 353 VEMKALEAIVHLRQHY-PKRLKAMIPPHLWTLVAPYGLTPGPDE 395
>gi|312114853|ref|YP_004012449.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219982|gb|ADP71350.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 417
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 200/405 (49%), Gaps = 36/405 (8%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ + AC F+ + +E VHGR R D+ + G ++ +
Sbjct: 20 RDLCTDCGVSRSSDPRRCGRACQFIKPDYPK---MEARVHGRTRNPQREDERFFGPYKRM 76
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
A +P EGAQWTGI T I +L+TG V+AV+ + +D DR P+P L ++
Sbjct: 77 ARAAMKRPREGAQWTGITTRIGERLLETGAVDAVLTMVADDADRWRPKPALITRAADMAK 136
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DN 220
A+G++ +P L L AG KR+ GV CQ+ DN
Sbjct: 137 ARGMRMGYAPLLALLEPAREAGHKRIAVIGVPCQIFALRGIEQELGFERVYAIGTPCSDN 196
Query: 221 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 279
T E KFL S +PET+ + EF DY V L+ +G ++E+P+ LP + L D
Sbjct: 197 TTTENFHKFLNLLSDKPETITYLEFRADYHVELRFENGKVKEIPFLLLPISKLPADFFPL 256
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 339
+C +C DYTN+L+D+ VGYM Q Q++ VRNE G+E+L L+ + + ++
Sbjct: 257 TCRTCVDYTNSLSDITVGYMA---------GQGQQWLIVRNETGEELLRLLGDEVSLSEP 307
Query: 340 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 399
++G R V +K + A G P + P + + + + VGP+GLEFAR ++
Sbjct: 308 GTAGKRDGPVKGFLKNTELAAGGL-PMRSMPNWARPIAGWLMPKVGPRGLEFARARVEMK 366
Query: 400 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 444
+ LH+ RA KR +P + +VE Y + + +SSK
Sbjct: 367 AVETVLHL-RAKLPKRIHNMVPEHVWALVERYGLVPSLSERVSSK 410
>gi|402851269|ref|ZP_10899434.1| hydrogenase [Rhodovulum sp. PH10]
gi|402498471|gb|EJW10218.1| hydrogenase [Rhodovulum sp. PH10]
Length = 413
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 182/368 (49%), Gaps = 35/368 (9%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ T AC FL +E VHGR R D+ + G +++
Sbjct: 27 RDLCTDCGVSRTARPGDCGHACQFLKPDYP---AMERRVHGRARDPARPDERFFGPFQQM 83
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+ A P GAQWTGI T + +L+TGMV+AV+ + DP D P+PVL PE +
Sbjct: 84 VRAALKAPRPGAQWTGITTRLGERLLETGMVDAVLTMAPDPSDVWRPKPVLVTKPEAMAQ 143
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DN 220
+G++ +P L L A G +++ G+ CQ+ DN
Sbjct: 144 CRGMRMGWAPLLALLEPARAQGFEKIAVIGIPCQIHALRALEDDLGFEKIYVVGTPCSDN 203
Query: 221 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVIAP 279
T E +FL + +P T+ + EF DY V L+ DG + VP+ LP + L D
Sbjct: 204 TTTERFHEFLALLADDPSTITYLEFRADYCVELRFSDGSEKRVPFLMLPLSKLPRDFFPL 263
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 339
+C +C DYTN LAD+ VGYMG + Q++ VRN+RG E+LSL+ + + P
Sbjct: 264 TCRTCVDYTNTLADITVGYMG---------GEGEQWLLVRNDRGAEILSLLGDEVRTAPP 314
Query: 340 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 399
S+G R V +K + A G P + P F+ L+A+ + +GP+GLEFAR ++
Sbjct: 315 GSAGKRAAPVKGFLKNTERAAGGL-PVRGTPNFLRPLVAWLMPKIGPRGLEFARARVEMK 373
Query: 400 TIRNYLHV 407
I LH+
Sbjct: 374 AIETILHL 381
>gi|194333446|ref|YP_002015306.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311264|gb|ACF45659.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Prosthecochloris aestuarii DSM 271]
Length = 381
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 193/361 (53%), Gaps = 38/361 (10%)
Query: 104 GRRKDSLD--DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GR++D D + G+ E A P+ GAQW GI+T +A++ + +EAVV +
Sbjct: 24 GRQRDLHDPVEMRFGITLERFSATLQHPLPGAQWGGIITRMALKAFENNTIEAVVTLHRT 83
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---- 217
+++ +PVLA T +E+ ++G KP LSP L +L G+K+LL G C +
Sbjct: 84 RENQFFSQPVLAETAQEIYDSRGNKPVLSPVLRSLETAYRKGIKKLLVIGAACHLHVLRD 143
Query: 218 --------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 257
VDN R+ LK S P + +H EFMQD+++H++H +
Sbjct: 144 FQERFTYLQDMEIFTIGIPCVDNIDRQRWPWVLKRMSRSPLSAMHMEFMQDFRIHIRHTN 203
Query: 258 GHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY 315
G +E+VP+F LP +L D + +C SCFDY N+LAD+ VGY+ + + Q+
Sbjct: 204 GMVEKVPFFSLP-QELSDPSIFPVACMSCFDYLNSLADVTVGYLAAE----LRPDEKRQW 258
Query: 316 ITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGR----GPSQPAPK 371
+ VR ++GK ++ ++N L P D + FVM T +A + + P + P
Sbjct: 259 VLVRTQKGKTLIDAIRNELTCYPEEGKWDCKKFVMNTAEATIASMKVQSRTYSPDRKIPL 318
Query: 372 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
++G++++ ++L GPKG+ FA YS D+H IR+Y +V + ++ ++ +P + + I+E Y
Sbjct: 319 WLGHILSGVLSLAGPKGIGFAHYSTDFHLIRHYYYVRERFPEQ-LERLVPRHVRSILEEY 377
Query: 432 N 432
+
Sbjct: 378 D 378
>gi|383757271|ref|YP_005436256.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
gi|381377940|dbj|BAL94757.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
Length = 413
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 196/399 (49%), Gaps = 44/399 (11%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PA+ C+ CG+ + AC F+ + +ET V GR R D+ + G
Sbjct: 20 PARTLCTDCGVSRSSDPRRCGRACQFIQPDYA---AMETRVQGRPRDPGRADELHFGPFR 76
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+ A +P +GAQWTGI T +A +L+TG V+AV+ + DP+DR P P L P E+
Sbjct: 77 RMWRAALKRPSDGAQWTGITTRLAERLLETGAVDAVLTMAPDPEDRWRPVPTLVTKPGEL 136
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------------- 218
+G++ +P L+ L AAG KRL G+ CQV
Sbjct: 137 ARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQELGLEQLYVIGTPCS 196
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVI 277
DN T E +FL + +PE++ + EF DY V ++ DG VP+ LP + L D
Sbjct: 197 DNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRVPFLQLPLSQLPTDFF 256
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
+C +C DY+N LAD+ VGYMG + Q++ VRNERG+++L L+ + + +
Sbjct: 257 PLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNERGEKILGLLGDEVTLA 307
Query: 338 PTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 393
S+G R + F+ T +A + R PS ++ ++ + + VGP+GLEFAR
Sbjct: 308 EPGSAGKREGPVKGFLANTERAAGGLPLRRMPS-----WLRPIVGWLMPKVGPRGLEFAR 362
Query: 394 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
L+ + LH+ R K + +P + K+VE Y
Sbjct: 363 ARLEMKAVETVLHLRREQPAKMKN-MVPPHVWKLVEPYG 400
>gi|332527610|ref|ZP_08403657.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
gi|332112013|gb|EGJ11990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
Length = 404
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 195/400 (48%), Gaps = 36/400 (9%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
P P + C+ CG+ + AC F+ + +ET VHGR R D+ Y
Sbjct: 6 PHDAAPTRTLCTDCGVSRSADPRRCGRACQFIQPDYA---AMETRVHGRPRDPARADERY 62
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
G + A +P EGAQWTGI T +A +L+TG V+AV+ + DP+DR P P L
Sbjct: 63 FGPFRRMWRAALKRPSEGAQWTGITTRLAERLLETGAVDAVLTMAPDPEDRWRPVPTLVT 122
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------- 218
P ++ +G++ +P L+ L AAG KRL G+ CQV
Sbjct: 123 KPGDLARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQELGLEQLYVI 182
Query: 219 -----DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 273
DN T E +FL + +PE++ + EF DY V ++ DG VP+ LP + L
Sbjct: 183 GTPCSDNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRVPFLQLPLSQL 242
Query: 274 -VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 332
D +C +C DY+N LAD+ VGYMG + Q++ VRNERG+++L L+ +
Sbjct: 243 PTDFFPLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNERGEKILGLLGD 293
Query: 333 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 392
+ + S+G R V + + A G P + P ++ ++ + + VGP+GLEFA
Sbjct: 294 EVTLAEPGSAGKREGPVKGFLANTERAAGGL-PLRRMPAWLRPIVGWLMPKVGPRGLEFA 352
Query: 393 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
R L+ + LH+ R K + +P + ++V+ Y
Sbjct: 353 RARLEMKAVETVLHLRREQPAKMKN-MVPPHVWELVQPYG 391
>gi|159045808|ref|YP_001534602.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
gi|157913568|gb|ABV95001.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
Length = 409
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 196/404 (48%), Gaps = 42/404 (10%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P G + C+ CGL T A AC F+ + +E VHGR R D+
Sbjct: 12 PTPGPAAQRKLCTDCGLSRTKDAAKCGQACQFIQPDYPK---MEAQVHGRARDPGRGDEQ 68
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + + A P GAQWTG+ T +A ++L+ G V+AV+ + DP+D PRPV+
Sbjct: 69 FFGPYRRMYRAALHAPKPGAQWTGLTTRLAQKLLEDGAVDAVLGMGPDPEDSWRPRPVII 128
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
P E+ +G++ +P L+ L G++RL G+ CQV
Sbjct: 129 TDPAEMAHLRGMRMGYAPLLSLLEPAAKTGLRRLAIIGIPCQVYALRAMEAELGFERLYV 188
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E +FL S PE + + EF DY V L+ +DG ++P+ LP +D
Sbjct: 189 IGTPCSDNTTTENFHQFLARLSPRPEDITYLEFRADYHVELRFIDGSRRDIPFLKLPLSD 248
Query: 273 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L + P +C +C DYTN LAD+ VGYM + Q++ VRN RG+E+L +
Sbjct: 249 LPNDFFPMTCRTCVDYTNTLADITVGYMA---------GEGDQWLIVRNARGQEILDRLG 299
Query: 332 NLLEITPTISSGDRRPFVMETVK--ADDNAKMGRG-PSQPAPKFVGNLIAFFINLVGPKG 388
+ + + S+G R +VK A++ A+ G P + P + ++ + + +GPKG
Sbjct: 300 DEVRLETPGSAGKR----AGSVKGFAENTARAAGGLPLRKMPDWARGIVGWLMPRIGPKG 355
Query: 389 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
LEFAR ++ + LH+ RA KR +P + ++ E Y
Sbjct: 356 LEFARARVEMKAVETVLHLRRA-HPKRMRAMIPDHVWRLAEPYG 398
>gi|110597779|ref|ZP_01386063.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
gi|110340686|gb|EAT59166.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
Length = 399
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 193/398 (48%), Gaps = 39/398 (9%)
Query: 65 CSRCGLCDT--YYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC + +C F + ET + GR R +++ G+
Sbjct: 6 CSSCGLCSIKKWPSTESLQSCVFNTGWLGE---HETALFGRERDPLDPEESRFGITSSRF 62
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR V AQW+GI+T +A + L + +VE VV + +D P PVLA + +++L A
Sbjct: 63 VARLRTAVPDAQWSGIITRLAEKALNSKLVEGVVTLHRHEEDFFHPIPVLAGSEKDILKA 122
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------------------------V 218
KG P LSP L +L + G+KRLL G C + V
Sbjct: 123 KGSIPVLSPVLRSLEEAHSKGLKRLLVIGAACHIHALRDFHRRFDYLRNMEIYTIGIPCV 182
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN + L+ S P T H EFM DY+VH+KHLDGHIE++P+F LP I
Sbjct: 183 DNANEKKWPWILERISKSPATARHIEFMPDYRVHVKHLDGHIEKIPFFSLPEELTNPEIF 242
Query: 279 P-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
P SC SCFDY N LAD+ VGY+ P + Q++ VR E+G + +L+ + LE
Sbjct: 243 PHSCLSCFDYLNGLADITVGYLAAPFKNRSKL----QWVLVRTEKGSVLNNLIADELETF 298
Query: 338 PTISSGDRRPFVMETVKADDNA----KMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 393
P + FV + K+ + K ++ P G+LI+ F+ GP+G+ FA
Sbjct: 299 PESGEWECFKFVAASAKSSAESMKCQKKEFRTTRKIPVAAGHLISEFLFRTGPRGVGFAH 358
Query: 394 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+S+D+H I++Y V + + ++ +P + I+E Y
Sbjct: 359 FSVDHHLIKHYYFVKFNY-PQHLERLVPPHVYTILEEY 395
>gi|189346478|ref|YP_001943007.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189340625|gb|ACD90028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 381
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 186/366 (50%), Gaps = 36/366 (9%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
LE + GR R D + G+ E AR + + AQW+GI+T +A+ + +V+ V
Sbjct: 18 LERQLFGRERSLDDPVEMRFGITAERFTARMKQRIPDAQWSGIITAMALRAFERKLVDGV 77
Query: 156 VCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQ 215
V + + + PVLA + +E+ A++G KP LSP L +L G+K++L G C
Sbjct: 78 VTLHRHTEQQFFSVPVLACSSDEIYASRGNKPVLSPVLRSLQTAYRQGLKKILVIGAACH 137
Query: 216 VQ------------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 251
+ VDN R L+ S+ P T H EFMQD+++
Sbjct: 138 LHMLRDFRERFPYLQEMEIFTIGIPCVDNIDRSRWTWVLERISASPATARHMEFMQDFRI 197
Query: 252 HLKHLDGHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 309
H++H DG E++PYF LP +L D + +C SCFDY N+L+D+ +GY+ ++
Sbjct: 198 HIRHSDGSTEKIPYFSLP-QELSDPAIFPKACMSCFDYLNSLSDITIGYLAAE----LTP 252
Query: 310 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 369
Q Q++ VR E+G+E+L LV + LE P F+ +T G + A
Sbjct: 253 QQDRQWVLVRTEKGRELLDLVNHELERFPEWGEWKCEGFIRQTAGGIIEQMKDTGKTYAA 312
Query: 370 ----PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 425
P+++G+L++ + +GPKG+ FA YS DYH IR+Y +V R ++ +P++
Sbjct: 313 EPLIPQWIGHLLSTTMGFIGPKGIGFAHYSADYHMIRHYYYV-RYRLPDHLERLVPAHVP 371
Query: 426 KIVEMY 431
I+E Y
Sbjct: 372 VILEEY 377
>gi|110681118|ref|YP_684125.1| coenzyme F420 hydrogenase, beta subunit [Roseobacter denitrificans
OCh 114]
gi|109457234|gb|ABG33439.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter
denitrificans OCh 114]
Length = 402
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 192/400 (48%), Gaps = 52/400 (13%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ +KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRLKDPRACGKACQFIAPDYP---ALEKAVHGRAR--GTGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR P EGAQWTGI T +A ++L G V+AV+ + D DR P+P L ++ A
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVPDDADRWRPKPALITEASDMARA 127
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNG 221
+G++ +P L L +A G RL G+ CQ+ DN
Sbjct: 128 RGMRMGYAPLLALLEEAQAQGFNRLAVIGIPCQIYALRALEADLGLERLYVIGTPCSDNT 187
Query: 222 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPS 280
T E +FL PET+ + EF DY+V L+ DG +P+ LP +DL D +
Sbjct: 188 TTENFHRFLALLDEAPETITYLEFRADYQVELRFTDGRQRLIPFLSLPISDLPRDFFPLT 247
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML+ + + +++
Sbjct: 248 CRTCVDYTNSLADITVGYMG---------GEGGQWLLVRNARGAEMLAGLGDRIQLQTPG 298
Query: 341 SSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSL 396
S+G R + F+ T +A G P + P ++ ++++ +GP+GLEFAR +
Sbjct: 299 SAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGPRGLEFARTRI 353
Query: 397 DYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 436
+ LH+ R K + +P + K+ Y+ Q
Sbjct: 354 EMKAAETILHLRREEPAKMKN-MIPDHVWKVAAPYDLTPQ 392
>gi|37522112|ref|NP_925489.1| hypothetical protein glr2543 [Gloeobacter violaceus PCC 7421]
gi|35213111|dbj|BAC90484.1| glr2543 [Gloeobacter violaceus PCC 7421]
Length = 388
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 199/404 (49%), Gaps = 49/404 (12%)
Query: 54 PPGGTYPAKDH--CSRCGLC-DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL 110
P G YP + CS CGLC + AHV++ C F D R+ E +HGR RR S
Sbjct: 5 PIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDD---RVSEREVQLHGRSRRL-SG 60
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
D+ Y GV + AR + P +Q G V+T+ +L +G VEAV+ + +PD+ + P
Sbjct: 61 DELYFGVFRSMHAARLSTPRPDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDN--TGTP 118
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------------- 217
VL R E+ G + L+P L+ + V+ G++RL GVGCQV
Sbjct: 119 VLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVGCQVSALRAIEAQLGLEK 178
Query: 218 --------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 269
DN T + +K S P TV EFM D+++ H +G IE+V YF +P
Sbjct: 179 LYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMP 238
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 329
+ L +C SCFD TN LADL VGYM G Q+ VRNE+G+ + +L
Sbjct: 239 MDKLRGCFPQACLSCFDQTNGLADLSVGYMAAD--IGW------QWFLVRNEQGEALFNL 290
Query: 330 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 389
+++ LE+ G+R + + ++ +G+ P+ P + L + + GP+GL
Sbjct: 291 LRDDLEMGRFTDRGNRSEAMKQILRY-----LGK-PAITLPSLLAQLFTWQVEHFGPRGL 344
Query: 390 EFARYSLDYHTIRN--YLHVNRAWGKKRADKHMPSYAKKIVEMY 431
EFAR +++ RN YL +R + K +P + + I++ Y
Sbjct: 345 EFARLAVENKQTRNWYYLKTHRP---DKLKKLIPRHVQAILDQY 385
>gi|89052791|ref|YP_508242.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Jannaschia sp. CCS1]
gi|88862340|gb|ABD53217.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Jannaschia sp. CCS1]
Length = 412
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 183/402 (45%), Gaps = 43/402 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P +R GLC I+ + D AC F+ E +HGR ++
Sbjct: 13 PKLTGAARPGLCTDCGISRMGDGKACGKACQFIAPDYPTAE---NRIHGRSAEPALAEEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ GV + A T P +GAQWTGI T +A E+L++ V AV+ V PDDR P PV+
Sbjct: 70 FFGVTHSMQRAALTVPADGAQWTGITTELAAELLRSEAVTAVLAVAPHPDDRWKPLPVIV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
P+E+ +G++ +P L L AAG R+ G+ CQV
Sbjct: 130 TDPDEMAKCRGMRMGYAPTLAALEPAIAAGHTRIAVIGIPCQVYALRQIEQTLGLDRLYV 189
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE-VPYFCLPAN 271
DN T E FL PET+ + EF DYKV L+ DG VP+ LP +
Sbjct: 190 IGTPCSDNTTTENFHHFLSLLDDAPETISYLEFRADYKVELRFDDGRAPRVVPFLKLPIS 249
Query: 272 DL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 330
L D +C +C DYTN LAD+ VGYMG Q++ RN RG EML+ +
Sbjct: 250 KLDPDFFPLTCKTCVDYTNRLADITVGYMG---------GDGDQWVITRNARGAEMLAAI 300
Query: 331 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 390
+ + TP G +R ++ A+ G P + P ++ L++F +GP+GLE
Sbjct: 301 SDRITFTPLTDKG-KRGGAVKGFLANTERAAGGMPLRSMPDWLRPLVSFLQPRIGPRGLE 359
Query: 391 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
FAR ++ I LH+ R R +P + + E Y+
Sbjct: 360 FARARVEMKAIDTILHLRRT-HPARVKNMVPGHVWSVAEPYD 400
>gi|339502020|ref|YP_004689440.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Roseobacter
litoralis Och 149]
gi|338756013|gb|AEI92477.1| putative coenzyme F420 hydrogenase/dehydrogenase, subunit beta
[Roseobacter litoralis Och 149]
Length = 405
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 192/403 (47%), Gaps = 55/403 (13%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRFKDPRACGKACQFIAPDYP---ALEKAVHGRTR--GAGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR P EGAQWTGI T +A ++L G V+AV+ + D D P+P L ++ A
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVPDDADSWRPKPALITEASDMARA 127
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNG 221
+G++ +P L L +A G KRL G+ CQ+ DN
Sbjct: 128 RGMRMGYAPLLALLEEAQAQGFKRLAVIGIPCQIYALRALEADLGLERLYVIGTPCSDNT 187
Query: 222 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPS 280
T E FLK PET+ + EF D+KV L+ DG +P+ LP +DL D +
Sbjct: 188 TTENFHTFLKLLDEAPETITYLEFRADFKVELRFTDGRQRLIPFLSLPISDLPRDFFPLT 247
Query: 281 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 340
C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML + + +
Sbjct: 248 CRTCVDYTNSLADITVGYMG---------GEGDQWLLVRNARGAEMLEGLGARIHLQAPG 298
Query: 341 SSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSL 396
S+G R + F+ T +A G P + P ++ ++++ +GP+GLEFAR +
Sbjct: 299 SAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGPRGLEFARTRV 353
Query: 397 DYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 436
+ LH+ R K + +P + K+ E Y+ Q+G+
Sbjct: 354 EMKAAETILHLRREEPAKMKN-MVPDHVWKVAEPYDLKPQDGE 395
>gi|83592273|ref|YP_426025.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Rhodospirillum rubrum ATCC 11170]
gi|386348985|ref|YP_006047233.1| coenzyme F420 hydrogenase [Rhodospirillum rubrum F11]
gi|83575187|gb|ABC21738.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodospirillum rubrum ATCC 11170]
gi|346717421|gb|AEO47436.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodospirillum rubrum F11]
Length = 410
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 195/409 (47%), Gaps = 42/409 (10%)
Query: 52 PIPPGGT------YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR 105
P P G T P++D C+ CGL T AC F+ G E VHGR R
Sbjct: 3 PPPDGATPPSEVALPSRDLCTDCGLSRTATPNRCGRACQFI---RPDYPGQEARVHGRCR 59
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
D+ + G ++++ A P GAQWTGI T +A +L+T V+AV+ + +DP DR
Sbjct: 60 DPARGDELFFGPYQQMYQAALIPPSPGAQWTGITTALAGRLLETRTVDAVLAMAADPADR 119
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV------- 218
P PV+ ++ +G++ +P L+ + AAG KRL G+ CQV
Sbjct: 120 WKPLPVIITQAADMARCRGMRMGHAPLLSLIEPAIAAGHKRLAVIGLPCQVHALRAIEAD 179
Query: 219 --------------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 264
DN T FL + +P++V + EF DY V L+ +G + +P
Sbjct: 180 LGLERLLVIGTPCSDNTTTPRFHDFLGLLADDPDSVTYLEFRADYHVELRFREGGRKLIP 239
Query: 265 YFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
+ LP + L D +C +C DYTN LAD+ VGYM + Q++ VRN+RG
Sbjct: 240 FLKLPLSKLPADFFPLTCKTCVDYTNVLADITVGYMA---------GRGEQWLLVRNDRG 290
Query: 324 KEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 383
+ML L+ + + +T S+G RR V +K A G P + P + L A+ +
Sbjct: 291 ADMLGLLGDRIRLTEPTSAGKRRGPVAGFLKNVARAAGGM-PVRAMPDWARPLAAWLMPK 349
Query: 384 VGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+GP+GLEFAR ++ I LH+ + +R +P++ +V Y
Sbjct: 350 IGPRGLEFARARVEMKAIETVLHLRKD-RPRRLRTMVPAHVWALVAPYG 397
>gi|304393680|ref|ZP_07375608.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
gi|303294687|gb|EFL89059.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
Length = 454
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 192/397 (48%), Gaps = 37/397 (9%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ + E V HGR + D+ + GVH+ ++ A
Sbjct: 65 CTDCGVSRMADPSACGTACQFIAPEYAESE---MVAHGRAA-SERPDEVHFGVHQRIVRA 120
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R EGAQWTGI T +A E+L+ G V+AV+ + DD+ P+P L ++ A+G
Sbjct: 121 RMAHSAEGAQWTGITTGLAAELLEQGKVDAVLAMVPSDDDKWRPKPALITDAADMTRARG 180
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNGTR 223
++ +P L L AG KRL G+ CQ+ DN T
Sbjct: 181 MRMGYAPLLALLEPALEAGHKRLAVIGIPCQIHALRKLEAELGLERLYVIGTPCSDNTTT 240
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 282
E FL+ PE + + EF DY+V L+ DG E+P+ LP + L D +C
Sbjct: 241 ENFHTFLELLDDRPERITYLEFRADYQVELRFDDGTKREIPFLKLPISKLPSDFFPLTCR 300
Query: 283 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 342
+C DYTN LAD+ VGYMG TG Q++ VRNERG+E+L+ + + + P S
Sbjct: 301 TCVDYTNRLADITVGYMG---GTG------EQWLIVRNERGEELLADLDDKIITGPVASK 351
Query: 343 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 402
G R V A+ G P + P +V ++AF + +GPKG EFAR ++ I
Sbjct: 352 GKRESHV-RGFMANVERAAGGLPLRAMPDWVRPIVAFMMPKIGPKGQEFARTRVEMKAIE 410
Query: 403 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 439
LH+ RA K+ +P++ K+V Y + D+
Sbjct: 411 TVLHL-RAAMPKKMRSMVPAHIWKLVAPYGLVPEKDE 446
>gi|381166492|ref|ZP_09875706.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
gi|380684065|emb|CCG40518.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
Length = 411
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 193/401 (48%), Gaps = 36/401 (8%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A+ C+ CG+ AC F+ + GLE +HGR R D+
Sbjct: 14 PPYDDAVARPLCTDCGVSRRSDPRACSRACQFIHPDHA---GLEARIHGRVRDPARPDEL 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G ++ A +P GAQWTG+ T +A +L++G V+AV+ + +DP D P PVL
Sbjct: 71 HFGPFLKMWQAALKEPKPGAQWTGLTTRLAERLLESGKVDAVLTMAADPQDSWRPMPVLV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------- 217
PE + +G++ +P L+ L G +RL GV CQ+
Sbjct: 131 TRPEGMAVCRGMRMGYAPLLSGLEPALERGYRRLAVIGVPCQIHPLRVLEPDLGFEQLYV 190
Query: 218 -----VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T E FL + P+ V + EF DY V ++ DG +E+P+ LP +
Sbjct: 191 IGIPCSDNTTTEKFHDFLALLTDTPDRVTYLEFRADYHVEMRFADGGKKEIPFLKLPISK 250
Query: 273 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L D +C +C DY N+L+DL VGYM + Q++ VRN +G+E+LSL+
Sbjct: 251 LPPDFFPLTCRTCVDYVNSLSDLTVGYMA---------GRGEQWLLVRNRKGEEILSLLG 301
Query: 332 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 391
+ + +T S+G R+ V +K + A G P + P + ++A+ + +GP+GLE
Sbjct: 302 DEVRLTEPTSAGKRQGAVSGFIKNTERAAGGL-PMRGMPDWARPIVAWLMPKIGPRGLEL 360
Query: 392 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
AR L+ + +H+ R +R +P++ +VE Y
Sbjct: 361 ARARLEMKAAESVIHL-RLQQPRRMAAMIPAHVWTLVEPYG 400
>gi|302383043|ref|YP_003818866.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Brevundimonas subvibrioides
ATCC 15264]
gi|302193671|gb|ADL01243.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Brevundimonas subvibrioides ATCC 15264]
Length = 415
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 186/391 (47%), Gaps = 37/391 (9%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL-DDTYLGVHEELLY 123
C+ CG+ AC F+ +ET VHGR R S D+ + G + ++
Sbjct: 25 CTDCGVSRMEDPTLCGKACQFIKPDYP---AMETRVHGRPRDPASRPDELFFGPVKRMVR 81
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A P GAQWTGI T I +L+TG V+AV+ + DPDD+ P PVL + +
Sbjct: 82 ASLKTPAPGAQWTGITTRIGERLLETGAVDAVLTMAPDPDDKWRPMPVLVTQASAMAEVR 141
Query: 184 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNGT 222
G++ +P L L A G +RL G+ CQV DN T
Sbjct: 142 GMRMGYAPLLALLEAARAQGYRRLAVIGIPCQVYALRSLEADLGLDALYVVGTPCSDNTT 201
Query: 223 REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVIAPSC 281
E +FL S P+T+ + EF DY V L+ DG ++ +P+ LP + L D +C
Sbjct: 202 TERFHEFLALLSEHPDTITYLEFRADYHVELRFTDGRVKTIPFLSLPISQLAPDFFPLTC 261
Query: 282 YSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 341
+C DYTNALAD+ VGYM Q Q++ VRN+RG+E+L L+ + + ++
Sbjct: 262 RTCVDYTNALADITVGYMA---------GQGEQWLLVRNDRGEELLDLLGDEVVLSEPGD 312
Query: 342 SGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTI 401
G R+ V + + A G P + P +V ++++ GP+GLEFAR L+
Sbjct: 313 KGRRKVAVAGFITNVERAAGGL-PLRRMPDWVRPIVSWLQPRTGPRGLEFARTRLEMKAA 371
Query: 402 RNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+H+ R +R +P + K+VE Y
Sbjct: 372 ETVIHLRRE-EPRRMKSMIPDHVWKLVEPYG 401
>gi|374618889|ref|ZP_09691423.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
gi|374302116|gb|EHQ56300.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
Length = 401
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 189/406 (46%), Gaps = 44/406 (10%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P + C+ CG+ T AC F+ +R LE HGR R+ + + + GV E
Sbjct: 13 PHRKLCTDCGISRTSEPGRCGYACQFISPDYAR---LEEQTHGRVRQPEGDVEPFFGVVE 69
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
E+ A GAQWTGI T + +L +G V AV+CV D +D P P L +++
Sbjct: 70 EMHQAALAPKRNGAQWTGITTRLGEALLASGDVSAVLCVGPDANDPWKPVPRLITDAQDM 129
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------------- 218
+ +G++ +P L L A G KR+ G+ CQ+
Sbjct: 130 ASCRGMRMGYAPLLELLEPAIADGHKRIAVIGIPCQIYALRSLEKELGLEHLVVIGTPCS 189
Query: 219 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 278
DN T E +FL PE + + EFM D+ V L+ G +P+ LP DL D
Sbjct: 190 DNTTTENFHEFLSLLDRNPERINYLEFMPDFHVELRFDTGKKRRIPFLQLPIADLRDDFF 249
Query: 279 P-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
P +C +C DY N L+D+ VGYMG + Q++ VRN++G++ L+ +++ L +
Sbjct: 250 PLTCRTCVDYVNTLSDITVGYMG---------GRGDQWLLVRNQKGEKALNAIRSELTLK 300
Query: 338 PTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 393
+SG R R F+ T +A G P + P+++ ++ + L GPKGLEFAR
Sbjct: 301 APSTSGKRHAAVRGFIENTRRA-----TGGLPLRRMPQWLRPIVGKIMPLTGPKGLEFAR 355
Query: 394 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 439
L+ + LH+ R KR +P + K+ E Y D+
Sbjct: 356 TRLEMKAAESILHLRRT-APKRLRTMVPPHVWKLAEPYGLTPSEDE 400
>gi|119356531|ref|YP_911175.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353880|gb|ABL64751.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 352
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 50/346 (14%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ KP+ G+QW+G++T +A K +VE VV +Q PD +PVLA++ +E+ + +
Sbjct: 17 AQLKKPIPGSQWSGMITRMATRGFKEKLVEGVVSLQRTPDHHFFSQPVLAQSFDEIHSTR 76
Query: 184 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------------------------VD 219
G KP LS L +L G+K++L G C + VD
Sbjct: 77 GNKPVLSHVLYSLQTASRQGMKKILVIGAACHLHTLRDFQERFDYFKEMEILTIGIPCVD 136
Query: 220 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD--VI 277
N R LK S P+T H EFMQD+++H++H G +E++P+F LP +L + +
Sbjct: 137 NIARSKWPWVLKRMSQSPDTARHIEFMQDFRIHIRHDGGRVEKIPFFSLP-EELANPGIF 195
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 337
P+C SC D N+LAD+ VGY+ + Q+ Q++ VR E GK++ L++ L+
Sbjct: 196 PPACMSCVDDLNSLADITVGYLE----AKLLPDQNRQWVLVRTETGKKLPKLIEAELDRF 251
Query: 338 PTISSGDRRPFV-------METVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 390
+ + R FV +E++K D R + P + G+ +A ++GPKG
Sbjct: 252 EEFGNRECRSFVQSSSKRIIESMKELDKEYSSR---RKIPVWFGHTLAGVFGMIGPKGKG 308
Query: 391 FARYSLDYHTIRNYLHVNRAWGKKRADKHM----PSYAKKIVEMYN 432
FARYS+D+H IR+Y +V K R +H+ P + + I+E Y
Sbjct: 309 FARYSVDFHLIRHYYYV-----KFRYPEHLETLVPRHVRVILEEYR 349
>gi|126734589|ref|ZP_01750335.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
gi|126715144|gb|EBA12009.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
Length = 404
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 182/385 (47%), Gaps = 41/385 (10%)
Query: 50 SKPIPPGGTYPA-KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+KP P PA + C+ CG+ + AC F+ E +HGR + D
Sbjct: 2 TKPASPQFATPAPRGLCTDCGVSRMADPSACGKACQFI---KPDYPAAEAAIHGRPAQSD 58
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ + GV + + A +GAQWTG+ T A +L+TG V+AV+ + D D+ P
Sbjct: 59 G-DEQFFGVTQAMYRAALIPARDGAQWTGLTTRFAERLLETGAVDAVLTMVPDDADKWRP 117
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------- 218
RP + ++ A+G++ +P L L AAG +++ G+ CQ+
Sbjct: 118 RPAIITKAADMKHARGMRMGYAPLLALLEPAHAAGHRKIAVIGIPCQIYALRALEADLGF 177
Query: 219 -----------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
DN T E FL + PETV + EF DY V L+ DG +P+
Sbjct: 178 ERIYVIGTPCSDNTTTENFHSFLARLTDAPETVTYLEFRADYHVELRFTDGTQRLIPFLK 237
Query: 268 LPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
LP +DL D +C +C DYTN LAD+ VGYM + Q++ VRN+RG EM
Sbjct: 238 LPLSDLPADFFPTTCRTCVDYTNRLADITVGYMA---------GEGDQWLIVRNDRGAEM 288
Query: 327 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLV 384
L+ + + + + P S G R V V +N ++ G P + P ++ ++ + + +
Sbjct: 289 LASLGDEVTLAPPGSRGKRAGSVKGFV---ENTRLAAGGLPLRRMPSWLRGIMGWLMPRI 345
Query: 385 GPKGLEFARYSLDYHTIRNYLHVNR 409
GP+G+EFAR ++ LH+ R
Sbjct: 346 GPRGVEFARARVEMKAAETILHLRR 370
>gi|84514573|ref|ZP_01001937.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
gi|84511624|gb|EAQ08077.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
Length = 410
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 172/369 (46%), Gaps = 40/369 (10%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ +E VHGR D+ + GV + A
Sbjct: 17 CTDCGVSRMADASACGKACQFI---KPDYPAMEARVHGRAAGMQG-DEPFFGVTGAMYRA 72
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
+GAQWTG+ T +A +L+TG V+AV+ + +DP DR PRP + ++ A+G
Sbjct: 73 ALQPARQGAQWTGLTTRLAERLLETGAVDAVLTMVADPADRWRPRPAIITDAADMAEARG 132
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV---------------------DNGTR 223
++ +P L L AAG +R+ G+ CQ+ DN T
Sbjct: 133 MRMGYAPLLALLEPARAAGHRRIAVIGIPCQIYALRALEAQLGFERIYVIGTPCSDNTTT 192
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 282
E FL + P+TV + EF DY V L+ DG +P+ LP DL D +C
Sbjct: 193 ENFHGFLARLTDAPDTVTYLEFRADYHVELRFADGSERLIPFLKLPIADLPRDFFPTTCR 252
Query: 283 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 342
+C DYTN LAD+ VGYM + Q++ VRN RG+EML + + + S
Sbjct: 253 TCVDYTNRLADITVGYMA---------GEGEQWLIVRNVRGQEMLDGLGAEVTLAAPGSR 303
Query: 343 GDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 400
G R V V +N ++ G P + P F+ ++ + + +GP+GLEFAR L+
Sbjct: 304 GKRAGAVKGFV---ENTRLAAGGLPLRRMPDFMRGIMGWLMPKIGPRGLEFARARLEMKA 360
Query: 401 IRNYLHVNR 409
LH+ R
Sbjct: 361 AETILHLRR 369
>gi|121998419|ref|YP_001003206.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Halorhodospira halophila SL1]
gi|121589824|gb|ABM62404.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhodospira halophila SL1]
Length = 419
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 181/393 (46%), Gaps = 36/393 (9%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CGL + AC F+ + LE HGR R + D+ + G +
Sbjct: 17 RDLCTDCGLSRSSDPKRCGRACQFIRPDYA---ALERRTHGRSRDPERPDELHFGPFRRM 73
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
A P GAQWTGI T +A +L++G V+AV+ V +D P+PVL P ++
Sbjct: 74 HQAALRTPRAGAQWTGITTRLAERLLESGRVDAVLTVTGASEDPWHPQPVLVTDPAKLSQ 133
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ---------------------VDN 220
+G++ +P L L A G KRL + CQ DN
Sbjct: 134 CRGMRMGYAPLLALLEPALAQGYKRLGVIALPCQTYPLRALEEELGLERLEIIGTPCSDN 193
Query: 221 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 279
+FL+ + PE V + EF DY V L+ DG E+P+ LP + L D
Sbjct: 194 TPTAHFHRFLELLTPSPEAVTYLEFRADYYVELRFQDGSKREIPFLQLPISRLPADFWPL 253
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 339
+C +C DYTNALAD+ VGYM + Q+I VRNERG+ ML L+ + + +
Sbjct: 254 TCRTCVDYTNALADITVGYMA---------GRGEQWILVRNERGEAMLELLGDEVRLG-A 303
Query: 340 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 399
SSG RR ++ + G PS+ P ++ +I + VGP+GLE AR L+
Sbjct: 304 PSSGGRRDGPVQGFIDNTERAAGGMPSRGMPNWLRPIIGRLMPFVGPRGLELARARLEMK 363
Query: 400 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 432
+H+ +RA +P + ++VE Y
Sbjct: 364 AAETLIHLQHQ-APRRARAMVPEHVYRLVEGYR 395
>gi|350553887|ref|ZP_08923041.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
gi|349789527|gb|EGZ43476.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
Length = 429
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 180/404 (44%), Gaps = 45/404 (11%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ T AC F+ + LE VHGR R D+
Sbjct: 30 PPLAAPRDRDLCTDCGISRTANPERCARACQFVKPDYA---ALEKRVHGRERNPQD-DEL 85
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + + A GAQWTGI T IA +L+T V+AV+ V DP D P PVL
Sbjct: 86 FFGPYTAMYQAALIHERPGAQWTGITTRIAERLLETQAVDAVLTVAPDPQDSWRPVPVLV 145
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQV--------------- 218
P + +G++ +P L L A G RL V CQV
Sbjct: 146 TDPAALRECRGMRMGYAPLLALLEPALAQGYTRLAVIAVPCQVHALRVLEPELGFERLEV 205
Query: 219 ------DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 272
DN T FL PE + + EF DY+V L+ DG +P+ LP +
Sbjct: 206 IGIPCSDNTTTAHFHHFLSLLDPHPEQITYLEFRADYQVELRFTDGQKRTIPFLQLPLST 265
Query: 273 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 331
L P C +C DYTN+LAD+ VGYMG + Q++ VRN +G+ +L V
Sbjct: 266 LSPHFFPLPCKTCVDYTNSLADITVGYMG---------GRGEQWLLVRNTKGQALLQQVD 316
Query: 332 NLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 387
L S G R R F+ T +A G P + PK++ L+A+ + +GPK
Sbjct: 317 GELRKKDPSSEGKRHTAVRGFIQNTQRA-----AGGLPLRSTPKWIRPLVAWLMPKIGPK 371
Query: 388 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
GLEFAR ++ + LH+ RA R + +P + I++ Y
Sbjct: 372 GLEFARARVEMKAAESVLHLRRA-RPNRVAQMIPPHLWTILKPY 414
>gi|308800482|ref|XP_003075022.1| unnamed protein product [Ostreococcus tauri]
gi|116061576|emb|CAL52294.1| unnamed protein product [Ostreococcus tauri]
Length = 163
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G YP ++HCS CGLC+T ++A V+ AC FL +VVHGR R+ D+ L
Sbjct: 36 GPAYPTREHCSECGLCETEHVARVRGACEFL-----------SVVHGRARKVSPDDEDRL 84
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
GV + YA + V+G+QWTG+VT++A ML++ M E V+CV SDPD
Sbjct: 85 GVVDGTFYAVTKQSVDGSQWTGLVTSVAKRMLESRMFEGVICVTSDPD 132
>gi|440756422|ref|ZP_20935623.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
gi|440173644|gb|ELP53102.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
Length = 107
Score = 85.5 bits (210), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEG 132
+D Y GVH+E++ A+K K +G
Sbjct: 66 KENDLYFGVHQEMMAAKKNKLFQG 89
>gi|116753495|ref|YP_842613.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanosaeta
thermophila PT]
gi|116664946|gb|ABK13973.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta thermophila PT]
Length = 362
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 43/259 (16%)
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLC Y D F E + GR R + + LG++ + AR T
Sbjct: 59 CGLCYAYCPRSFFDMPFF-----------EKKLFGRSRASEEV----LGIYRSAMAARAT 103
Query: 128 KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK 186
PV G Q G+VT + + L+TG+++ V +D + R P +A TPEE++AA G K
Sbjct: 104 -PVRGKVQDGGVVTALLVHALETGVIDCAVV--TDRNSRWQTTPKVATTPEEIIAAAGTK 160
Query: 187 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFM 246
T++P++ + + +G ++ F G CQ+Q + LD+ + ++ M
Sbjct: 161 YTIAPSIAGVQMAINSGFTKIGFTGTPCQIQALRKA-QLLDEPYQFGQERIALMIGLFCM 219
Query: 247 QDY------------KVHLKHLDGHIEEVPYFC-----------LPANDLVDVIAPSCYS 283
+++ K++L+ D E+ +P + + P C
Sbjct: 220 ENFDYQRLMTGLVKEKMNLQPTDVERFEIQRGMFRVISKEGTKEVPLQETDEFTWPGCGP 279
Query: 284 CFDYTNALADLVVGYMGVP 302
CFD+T LAD+ VG +G P
Sbjct: 280 CFDFTAELADVSVGSVGSP 298
>gi|224102271|ref|XP_002312617.1| predicted protein [Populus trichocarpa]
gi|222852437|gb|EEE89984.1| predicted protein [Populus trichocarpa]
Length = 79
Score = 71.2 bits (173), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 243 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 282
++ ++ + VHLKHLDGHIEEVPYFCLPAN+L DVIAPS Y
Sbjct: 39 WKLLEFFVVHLKHLDGHIEEVPYFCLPANELADVIAPSWY 78
>gi|395644720|ref|ZP_10432580.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
gi|395441460|gb|EJG06217.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
Length = 287
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 26/213 (12%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ + AR T + ++GAQ GIVT + L+ G+++ + V D+ P P++
Sbjct: 3 LGNYKTCVAARSTDKEILKGAQDGGIVTQLFAYALEEGIIDGAI-VAGPSDEPWKPEPIV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTRE 224
A T E+LAA+G K TLSPN++ L + G+ R+ G CQ+Q G R+
Sbjct: 62 ATTKAELLAARGTKYTLSPNISLLKEATRSYGLDRVGIVGTPCQMQAVRKAQLYPVGMRD 121
Query: 225 GLDKFLKA---------------ASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 269
DK A A E L E ++ + + E +P
Sbjct: 122 VPDKIALAIGIFCMENFPYQSIEALVEDHCNLKMESVKKLDIGKGKFWAYTERGAVAQIP 181
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
P C+ C DY + LAD+ G +G P
Sbjct: 182 LKVTHKYEQPGCHVCLDYVSNLADVSTGSVGTP 214
>gi|284162685|ref|YP_003401308.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284012682|gb|ADB58635.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus profundus DSM 5631]
Length = 337
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 48/306 (15%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++C CG+C Y + V + + + IE + G R+ D++ G +
Sbjct: 37 PVAENCEHCGVC--YDVCPVN----YFSESKAEIE-----IFGEKRKDDAI-----GYYR 80
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
E+L R T AQ G VT I +L++G +++ V + D+ +P+P++A + E
Sbjct: 81 EILAGRATDENIRSKAQDGGAVTAILTYLLESGAIDSAVV--TGRDESWNPKPIVAISKE 138
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-VDNGTREGLDKFLKAASSE 236
++LA+ G K T L + G K + G+ C V+ + N G + S
Sbjct: 139 DLLASTGSKYTQCLVLLGVKDAIKMGKKSIALVGLPCHVKAIRNAQMSGHSLGAEKVSVV 198
Query: 237 PETVLHYEFMQDYKVH-LKHLDGHIEEVPYF----------------CLPANDLVDVIAP 279
F +D H L+ + IE+V F +P +L D +
Sbjct: 199 LGLFCMETFSRDLLKHKLEEIGVKIEDVEKFDIKKGKLMAWVKGEVKTIPLKELKDAVRT 258
Query: 280 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML--SLVKNLLEIT 337
SC C D+T AD+ G +G G S I +R++RG++++ ++ + LE+
Sbjct: 259 SCKFCNDFTAEFADISFGSVGSD--DGWST------IIIRSDRGEKIVKGAVDQGYLEVQ 310
Query: 338 PTISSG 343
P G
Sbjct: 311 PITEKG 316
>gi|88603574|ref|YP_503752.1| coenzyme F420-reducing hydrogenase subunit beta [Methanospirillum
hungatei JF-1]
gi|88189036|gb|ABD42033.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanospirillum
hungatei JF-1]
Length = 288
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 114 YLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
YLG ++ + AR T + +Q GIVT++ + L+ G+++ + V + P+P+
Sbjct: 3 YLGKYKSAVAARSTSAEVLRCSQDGGIVTSMFLYALEEGIIDGAI-VAGQGEKPWQPKPI 61
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTR 223
+A TPEE+L+++G + + PN++ L V G+ ++ G CQ+Q G R
Sbjct: 62 VATTPEEILSSRGTRYNVCPNMSVLKESVRKYGLDKVGIVGTPCQIQALRKAQLYPVGLR 121
Query: 224 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH------IEEVPYFCLPANDLVDVI 277
+ DK A Y+ M ++D H I + Y+ V I
Sbjct: 122 DVCDKIALAMGIFCMENFSYQSMTQIVQDHCNVDLHSLKKTDIGKGKYWAYTNRGAVSQI 181
Query: 278 ---------APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML- 327
P C+ C DY LAD+ G +G P G S + +RN G+ +
Sbjct: 182 PLKLTHKYEQPGCHVCLDYVANLADISTGSVGSPD--GWST------VFIRNNNGENIWN 233
Query: 328 -SLVKNLLEITP 338
++ + E P
Sbjct: 234 KAVAAGIFETKP 245
>gi|20094365|ref|NP_614212.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19887430|gb|AAM02142.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 305
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 56/265 (21%)
Query: 111 DDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR--- 165
D LG H + AR T K + Q GI + + I L+ G+ + V+ +DPDD
Sbjct: 12 DPELLGDHLGVFTARSTERKVTKVTQDGGIASAVMIYGLEEGLFDGVIAAVADPDDPEEP 71
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ------- 217
PRPV+ P+EVL A G K T PN++ L V + G +++ G CQ++
Sbjct: 72 WKPRPVVITDPDEVLEAAGTKYTYCPNVSVLKEAVRSYGCEKVAMVGTPCQIRAVRKAQL 131
Query: 218 --------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 257
++N EG+ ++ + + + K + D
Sbjct: 132 CPIGMRHVPDKIELLIGIICMENFPYEGMKTIIEQLCGVWIREVTKMDIGNGKFWVYTKD 191
Query: 258 GHIEEVPYFCLPANDLVDVIAP----SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 313
G ++ +P +D P C+ C DY L+DL G +G P G S
Sbjct: 192 GEVKSIP---------IDETHPFEGEPCHVCTDYCAELSDLTAGSVGSPD--GWST---- 236
Query: 314 QYITVRNERGKEMLS--LVKNLLEI 336
+ VR E+ KE+L + + LLE+
Sbjct: 237 --VIVRTEKAKEILDDMVEQGLLEV 259
>gi|219850772|ref|YP_002465204.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaerula
palustris E1-9c]
gi|219545031|gb|ACL15481.1| coenzyme F420 hydrogenase, subunit beta [Methanosphaerula palustris
E1-9c]
Length = 291
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 110 LDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D +LG + ++ AR T ++GAQ GIVT + L+ G+++ + V D+
Sbjct: 2 VSDNFLGNYASVVAARSTDKSILKGAQDGGIVTQLFAYALEEGIIDGAI-VAGPGDEPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDN------ 220
P PV+A T EE+LAA+G K +SPN+ + + G+ ++ G CQ+Q
Sbjct: 61 PVPVVATTVEELLAARGTKYNISPNMQLIKEATRSYGLDKVGIVGTPCQIQALRKGQLYP 120
Query: 221 -GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP-------YFCLPAND 272
G R+ DK A + ++ + ++ H + +E V F +
Sbjct: 121 VGLRDVPDKIALAVGI--FCMENFPYQSIVQLVEDHANTKLENVTKMDIGKGKFWVYTGR 178
Query: 273 LVDVIAP----------SCYSCFDYTNALADLVVGYMGVP 302
V P C+ C DY + LAD+ G +G P
Sbjct: 179 GASVQLPLKITHKYEQAGCHVCLDYVSNLADVSTGSVGTP 218
>gi|126180117|ref|YP_001048082.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoculleus
marisnigri JR1]
gi|125862911|gb|ABN58100.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoculleus
marisnigri JR1]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR T + +Q GI+TT+ L+ G+++ + V D+ P P++
Sbjct: 7 LGNYKSVISARSTDKDITKKSQDGGIITTLFAYALEEGIIDGAI-VAGPSDEPWKPEPMV 65
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDN-------GTRE 224
T E+LAA G + T+SPNLN + + G+ R+ G CQ+Q G R+
Sbjct: 66 VTTKAELLAAAGTRYTISPNLNLIKEATRSYGLDRVGIVGTPCQMQAVRKAQLYPIGMRD 125
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF-----------------C 267
DK A L Y+ ++ + H + +E V
Sbjct: 126 VDDKIALALGIFCMENLSYQALE--AIVEDHCNQKMESVKKMDIGKGKFTVYTERGAVSQ 183
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P + + P C C DY LAD+ G +G P
Sbjct: 184 MPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 218
>gi|357037825|ref|ZP_09099624.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
gi|355360381|gb|EHG08139.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
Length = 366
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 39/264 (14%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEA 154
++ V GR R +D LGV + + +AR GAQ+ G+ T +A L+ G++
Sbjct: 64 MDRAVFGRER-----EDQALGVLQGIYFARAAGDKAPGAQYGGVTTALAALALRQGLISG 118
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 214
V + D+ P P LART EV A G K P L L G+ L G C
Sbjct: 119 AVLTGGEADN---PHPALARTAGEVYACAGSKYVGVPTLAELNRALRDGLTGLGVVGRPC 175
Query: 215 QVQVDNGTREG-LDKFLKAASSEPETVL-----------HYEFM----QDYKVHLKHL-- 256
QV ++G L E VL Y F+ Q KV +
Sbjct: 176 QVAAVRKMQQGNLPGAQFNVPGAVELVLGLFCFASLTPDFYSFLSGQVQGEKVIKMDIPE 235
Query: 257 DGHIEEVPY--FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 314
DG + E + +DL I +C C D T+ AD+ VG +
Sbjct: 236 DGPVVETSAGSYRWSMDDLRPYIHKACNLCLDPTSEWADIAVG--------ATEYDRAWN 287
Query: 315 YITVRNERGKEMLSLV--KNLLEI 336
+ VR++RG+++L+L K ++EI
Sbjct: 288 TLVVRSDRGRDLLNLALDKGVIEI 311
>gi|21229144|ref|NP_635066.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
mazei Go1]
gi|20907706|gb|AAM32738.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
Length = 294
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 50/261 (19%)
Query: 112 DTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D YLG + + AR T + ++ AQ GI T + + L+ G+++ + V + D PR
Sbjct: 7 DPYLGKYITCVSARSTDKEILKKAQDGGIATALMVYALEEGIIDGTI-VAGEGDRPWEPR 65
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ----------- 217
P++A + E++L A+G K ++SP + L + G+ ++ GV CQ+Q
Sbjct: 66 PIVAMSREDILKARGTKYSISPQIAWLKEATRSFGLDKVGVTGVCCQMQAVRKAQLYPIN 125
Query: 218 ----------------VDNGTREGLDKFLK-AASSEPETVLHYEFMQ-DYKVHLKHLDGH 259
++N + L ++ A+ +V E + + VH + G+
Sbjct: 126 MRDVPGKVALTVGLFCMENFPYKSLQTIVEDHAAQSLGSVKKMEITKGKFWVHTER--GN 183
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 319
+ VP L A + P C+ C DY ++LAD+ G +G P G S + +R
Sbjct: 184 VSTVP---LKATHKYE--QPGCHVCLDYVSSLADISTGSVGSPD--GWST------VFIR 230
Query: 320 NERGKEMLS--LVKNLLEITP 338
++G E+ S + + E P
Sbjct: 231 TKKGNEVWSKAVAAGMFETKP 251
>gi|397780547|ref|YP_006545020.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939049|emb|CCJ36304.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 295
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR T ++ AQ GI+TT+ L+ G+++ + V D+ P P++
Sbjct: 4 LGNYKSVISARSTDRDILKKAQDGGIITTLFAYALEEGIIDGAI-VAGPGDEPWKPEPMV 62
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTRE 224
T E+LAA G + T+SPNL+ + + G+ R+ G CQ+Q G R+
Sbjct: 63 VTTKAELLAAAGTRYTISPNLSLIKEATRSYGLDRVGIVGTPCQIQAVRKAQVYPIGMRD 122
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF-----------------C 267
DK A L Y+ ++ + H + +E V
Sbjct: 123 VDDKIALALGIFCMENLSYQALE--AMVEDHCNQKMESVTKMDIGKGKFTVYTERGAVAQ 180
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P + + P C C DY LAD+ G +G P
Sbjct: 181 MPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 215
>gi|386003032|ref|YP_005921331.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
gi|357211088|gb|AET65708.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
Length = 366
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 39/260 (15%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
D+ CGLC Y + D + G+ V GR RR +D LG++ +
Sbjct: 54 DYDPLCGLCYAYCPRTMLD-----------MPGMAKRVFGRERR----EDEPLGIYRKAA 98
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR K AQ G+ T + I L+ G+++ V + D D+ P +A T EE+ AA
Sbjct: 99 SARAVKAGARAQDGGVATALLIGALEAGIIDCAVVTERD--DKWRGLPKVATTAEEIAAA 156
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------VDNGTREGLDK------F 229
G K T++P++ + + G K++ F G CQ+Q ++ + G +K
Sbjct: 157 AGTKYTITPSVTGVQMAMDQGFKKIGFVGTPCQIQALRKVQLLEEPYQFGQEKIALLVGL 216
Query: 230 LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV---------DVIAPS 280
+ E E + + + + +D + F + + D+V D +
Sbjct: 217 FCMENFEHELLFPHLVEGKFGFKAEEVDKFEVQKGMFRVLSGDMVKEVPLEETDDYVWKG 276
Query: 281 CYSCFDYTNALADLVVGYMG 300
C CFD+ LAD+ VG +G
Sbjct: 277 CGPCFDFAAELADVSVGSVG 296
>gi|423065980|ref|ZP_17054770.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712479|gb|EKD07664.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 64
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 372 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 431
+ ++ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 2 WAAKMMGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 60
>gi|340624110|ref|YP_004742563.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904378|gb|AEK19820.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 47/245 (19%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ +D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIV--ANTEDGFKAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A TPEEVL+A G K T+SPN++ L V ++++ G CQV+
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 218 -------------VDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
++N + EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFSYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKAV 180
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 324 KEMLS 328
+E L+
Sbjct: 228 EEYLN 232
>gi|73667996|ref|YP_304011.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|85682155|sp|P80490.2|FRHB_METBF RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2463282|emb|CAA74093.1| F420-reducing hydrogenase isoenzyme II beta subunit [Methanosarcina
barkeri]
gi|72395158|gb|AAZ69431.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ AQ GI T + + L+ G ++ + V + D
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEEGFIDGTI-VAGEGDKPWQ 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ--------- 217
P+P +A T EE+L A+G + ++SP ++ L + G+ ++ GV CQ+Q
Sbjct: 61 PKPEVAMTREEILKARGTRYSISPQISWLKEATRSFGLDKVGVTGVCCQMQAVRKAQLYP 120
Query: 218 ------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 259
++N + L ++ +++ + + K + G+
Sbjct: 121 INMRDVPGKVAFTVGLFCMENFPYKSLQSIVEDHANQSLGSVKKMEITKGKFWVYTERGN 180
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 319
+ VP L A + P C+ C DY + LAD+ G +G P G S + +R
Sbjct: 181 VATVP---LKATHKYE--QPGCHVCLDYVSNLADISTGSVGSPD--GWST------VFIR 227
Query: 320 NERGKEMLS--LVKNLLEITP 338
+ G E+ S + + E P
Sbjct: 228 TKVGNEIWSKAVADGMFETKP 248
>gi|288561317|ref|YP_003424803.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
gi|288544027|gb|ADC47911.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
Length = 281
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T K ++ AQ GIVT + L+ ++E + V + +D P P +
Sbjct: 3 FGTYKDVVSARATDKAIQKVAQDGGIVTALLTYALEENIIEGAI-VAGNTEDPWKPEPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------------- 217
A TPEE++AA G K T SPN L V G++++ G CQ+
Sbjct: 62 AMTPEEIIAAAGTKYTFSPNAIRLKEAVRQYGLEKIGTVGTPCQIMGLRKMQSYPFATRF 121
Query: 218 -------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 264
++N R+ L F++ + ++ + K + ++G
Sbjct: 122 VADKLALIIGIFCMENFPRDSLKTFIEGKMNSSLEGVNKMDIGKGKFWITDVEGE----- 176
Query: 265 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
LP + C C DY LAD+ G +G P
Sbjct: 177 -SGLPLKETHGYEQAGCNICLDYVAELADVSTGSVGSP 213
>gi|45358380|ref|NP_987937.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|44921138|emb|CAF30373.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 47/245 (19%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIVANTE--DGFKAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A TPEEVL+A G K T+SPN++ L V ++++ G CQV+
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 218 -------------VDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
++N EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKAV 180
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 324 KEMLS 328
+E L+
Sbjct: 228 EEYLN 232
>gi|126178281|ref|YP_001046246.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
[Methanoculleus marisnigri JR1]
gi|125861075|gb|ABN56264.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoculleus marisnigri JR1]
Length = 339
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG +E+++ AR PVE Q G VT I + L G+++AVV V DP + P +
Sbjct: 78 LGPYEDIVAARAVFPVERKQSGGAVTAILVNALDEGLIDAVVTVTRDPWT-MKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKA 232
+ EE++ G + + P L +L V +R+ GV C + R + L+
Sbjct: 137 SSEELVQHAGSRYSWWVPLLASLKEAVVTRKYRRVAVVGVPCVARATQAIRASDHELLRP 196
Query: 233 ASSEPETVL--------HYEFMQDYKVH---------LKH------LDGHIEEVPYFCLP 269
+ V+ Y + + K+ ++H LD ++++ + +P
Sbjct: 197 YAKAIRLVIGLFCTETFDYAKLVEGKLQSEKKIEPWEIRHLDIKGKLDVYLQDERHISIP 256
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHPQYITVRNERGK 324
+L + + P C C D+T AD+ G +G P YT + +RN+ G+
Sbjct: 257 LAELEESVRPGCRVCNDFTAVNADVSAGAVGSPDGYT---------TLVIRNDIGR 303
>gi|315427054|dbj|BAJ48671.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
gi|343485722|dbj|BAJ51376.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 399
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 118/316 (37%), Gaps = 81/316 (25%)
Query: 63 DHCSRCGLCDTYYIAHVKDAC--AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 90 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 132
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ +R T ++ +Q G VT++ I LK +++A + + L P P L P++
Sbjct: 133 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAALSTTTSEQPLKPIPKLVFEPDD 192
Query: 179 VLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQVDNGTR------------- 223
VL G + T +PNL LAL EA GV +L GV CQ+ NG R
Sbjct: 193 VLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQI---NGLRYLQHSVPEIRYAE 247
Query: 224 --------------------EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
GL K+ P V + LK+ D ++
Sbjct: 248 WFKQHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNGDEIVK-- 305
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV-RNER 322
P L P+C C DY AD+ VG + H ITV R
Sbjct: 306 -----PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTITVLRTRV 350
Query: 323 GKEML--SLVKNLLEI 336
GK + ++ K LEI
Sbjct: 351 GKTLFEDAVSKGYLEI 366
>gi|134045687|ref|YP_001097173.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132663312|gb|ABO34958.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 47/245 (19%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ +D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIV--ANTEDGFKAVPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A TPEEVL+A G K T+SPN+ L V ++++ G CQV+
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNIAVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 218 -------------VDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
++N EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKTV 180
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 324 KEMLS 328
+E L+
Sbjct: 228 EEYLN 232
>gi|52549133|gb|AAU82982.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos24D9]
Length = 374
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 47/250 (18%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 137
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC------QVQ 217
P +A E++LAA G K T P+++ + G K + G+ C +VQ
Sbjct: 138 --WIAEPFVATKKEDILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQGMRKVQ 195
Query: 218 VDNGTREGLDK---FLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL------ 268
+ G G DK + SE M K L L IE+V F +
Sbjct: 196 LSKGFDVGADKVKLLIGLLCSETFD------MPMLKNKLLELGTRIEDVEKFNIKKGSFI 249
Query: 269 -----------PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
P ++ D + +C C+D+ AD+ VG +G G S +
Sbjct: 250 VYTKAGKELKTPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGWST------VI 301
Query: 318 VRNERGKEML 327
R++ GKE++
Sbjct: 302 TRSDAGKELV 311
>gi|20089855|ref|NP_615930.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
acetivorans C2A]
gi|19914804|gb|AAM04410.1| coenzyme F420 hydrogenase, subunit beta [Methanosarcina acetivorans
C2A]
Length = 291
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D YLG + + AR T + ++ AQ GI TT+ + L+ G+++ V+ V + D
Sbjct: 2 VSDPYLGKYTTCISARSTDREILKKAQDGGIATTLMVYALEEGIIDGVI-VAGEGDLPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDNGTR--- 223
PRP +A + +++L A+ K +SP ++ + + G+ ++ GV CQ+Q +
Sbjct: 61 PRPFVAMSRKDILKAQKAKYNISPQISWIKEATRSFGLDKVGVTGVCCQIQAVRKAQLYP 120
Query: 224 -------------EGL---DKFLK---AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 264
GL + FL A E T ++ ++ + E
Sbjct: 121 INMRDVPGKIAFVVGLFCMENFLYDSIQAIVEDHTNQSLSSVKKMRIGKGKFQVYTERGN 180
Query: 265 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
P P CY C DY + L D+ G +G P
Sbjct: 181 VATAPLQATHKYGQPGCYVCLDYVSNLGDISTGSVGSP 218
>gi|315428121|dbj|BAJ49707.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 356
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 118/316 (37%), Gaps = 81/316 (25%)
Query: 63 DHCSRCGLCDTYYIAHVKDAC--AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 47 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 89
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ +R T ++ +Q G VT++ I LK +++A + + L P P L P++
Sbjct: 90 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAALSTTTSEQPLKPIPKLVFEPDD 149
Query: 179 VLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQVDNGTR------------- 223
VL G + T +PNL LAL EA GV +L GV CQ+ NG R
Sbjct: 150 VLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQI---NGLRYLQHSVPDIRYAE 204
Query: 224 --------------------EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
GL K+ P V + LK+ D ++
Sbjct: 205 WFKQHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNGDEIVK-- 262
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV-RNER 322
P L P+C C DY AD+ VG + H ITV R
Sbjct: 263 -----PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTITVLRTRV 307
Query: 323 GKEML--SLVKNLLEI 336
GK + ++ K LEI
Sbjct: 308 GKTLFEDAVSKGYLEI 323
>gi|45358948|ref|NP_988505.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|45047814|emb|CAF30941.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ PN
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTREGLDKF--------------- 229
L+ + + V G +L F G CQV+ G R DK
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF----CLPANDLVDVIAPSCYSC 284
+KA E H D V G + +P D SC+ C
Sbjct: 142 GMKAIVEE-----HCGIKMDDVVKTDIGKGKFWVYSKWGDVKTIPLKDTHPYEQGSCHVC 196
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 197 MDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|340624695|ref|YP_004743148.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904963|gb|AEK20405.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ PN
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTREGLDKF--------------- 229
L+ + + V G +L F G CQV+ G R DK
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPIGYRHVPDKIALIMGIFCMENFPYN 141
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF----CLPANDLVDVIAPSCYSC 284
+KA E H D V G + +P D SC+ C
Sbjct: 142 GMKAIVEE-----HCGIKMDDVVKTDIGKGKFWVYSKWGDVKTIPLKDTHPYEQGSCHVC 196
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 197 MDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|330508186|ref|YP_004384614.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
gi|328928994|gb|AEB68796.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
Length = 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 61/244 (25%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
+E+ + GR R + LG++++ + A+ AQ G+ T + + L++GM++
Sbjct: 1 MESKLLGRTRNPEE----KLGIYKKAISAQAVSREGLAQDGGVATALLVFALESGMIDCA 56
Query: 156 VCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQ 215
+ D + R R V T +E+ AA G K T++ ++N+LA G +++ F G CQ
Sbjct: 57 IVTDKDDEWRTVSRVV--TTADEIRAAAGTKYTINNSVNSLAEALNMGFEKIGFVGTPCQ 114
Query: 216 VQ-----------------------------------VDNGT---REGLDKFLKAASSEP 237
+Q + NG R GLD P
Sbjct: 115 IQGLRKVQLLEEPYQIGQEKIALLVGLFCMENFDYDLLMNGLVKGRFGLD---------P 165
Query: 238 ETVLHYEFMQD-YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 296
+ V +E + ++V K G ++EV L D + C CFD+ + LAD+ V
Sbjct: 166 KNVARFEIKKGMFRVIDKQ--GKVDEVK---LEETDQYNF--KGCGPCFDFASELADISV 218
Query: 297 GYMG 300
G +G
Sbjct: 219 GSVG 222
>gi|297619117|ref|YP_003707222.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378094|gb|ADI36249.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 43/221 (19%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T + ++ AQ GIV+ I L++ +++ V+ ++ +D + P +
Sbjct: 4 FGNYKTVISARATDKEILKKAQDGGIVSAAYIHGLESKLLDGVIV--ANTEDGFNAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDNGTREGLDKF-- 229
A TPEEVL A G K T+SPN++ L V ++++ G CQVQ R+ L K+
Sbjct: 62 ATTPEEVLNAAGTKYTVSPNISVLKDAVREYALEKVGIVGTPCQVQ---AIRK-LMKYPM 117
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-------------- 274
+ S+ V+ M+++ + + +EE Y + ND++
Sbjct: 118 GFRHTDSKIALVMGIFCMENF--SYEGMKAIVEE--YAGIRMNDVLKTDIGKGKFWVYSK 173
Query: 275 --DVIA-----------PSCYSCFDYTNALADLVVGYMGVP 302
DV + SC+ C DYT LAD+ G +G P
Sbjct: 174 YGDVQSVKLKDTHMYEQKSCHICTDYTAELADISTGSVGSP 214
>gi|84490093|ref|YP_448325.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaera
stadtmanae DSM 3091]
gi|84373412|gb|ABC57682.1| FrhB [Methanosphaera stadtmanae DSM 3091]
Length = 298
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 51/264 (19%)
Query: 110 LDDTYLGVHEELLYAR--KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D+ LG H+E++ A+ K + AQ GIV+ I I L+ +++ + V D+
Sbjct: 2 IQDSVLGPHQEIITAKAADNKVLSKAQDGGIVSAILIYALEENIIDGTI-VAGPGDEPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------VD 219
P P++A T +E+L G K T+ PNL+ + G++++ G CQV
Sbjct: 61 PEPLVATTKKEILKGAGTKYTMCPNLSVIKEATREYGLEKIGTVGTPCQVMGLRKMQTYP 120
Query: 220 NGTREGLDKFLKAASSEPETVLHYEFMQDY--------------------KVHLKHLDGH 259
G R +DK + YE ++ + K+ + H G
Sbjct: 121 LGVRNVVDKIALSIGIYCMENFPYESLKTFINDKVGVTPSQVTKMNITKGKLFITHTGGE 180
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV- 318
+ +P + C C DY L+DL G +G P + T+
Sbjct: 181 GK------IPLKETHGYEQAGCNYCMDYVAELSDLSCGSVGA----------KPGWSTII 224
Query: 319 -RNERGKEML--SLVKNLLEITPT 339
R ++G ++ ++ + +LE T T
Sbjct: 225 KRTDKGASLIDKAIKEGVLETTET 248
>gi|296109548|ref|YP_003616497.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[methanocaldococcus infernus ME]
gi|295434362|gb|ADG13533.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus infernus ME]
Length = 352
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++D YLG++ A+ ++ AQ G+V+ I I L+ +++ + ++ D + L P
Sbjct: 89 EMEDKYLGIYR----AKSKLEIKNAQNGGVVSAILINALEEELIDGAIVIKQD-NWTLEP 143
Query: 169 RPVLARTPEEVLAAKGVK--PTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREG 225
LA T EEV+ A G K +SP LN L V ++RL G C ++ +
Sbjct: 144 ISYLATTKEEVVKAAGSKYLRKVSP-LNALKKAVMEEKLERLAIVGTPCIIEAMAKIQSS 202
Query: 226 LDKFLK---AASSEPETVLHYEFMQDYKVHLKHL-------------------------D 257
++ LK A ++ +E + DY LK L D
Sbjct: 203 VNDLLKPFRKAIRLKISLFCFE-IYDYAKMLKKLEEEGINPWDIKKMEIERGKFLLYLVD 261
Query: 258 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
G I+E +L V+ C SC D+T +D+ VG +G P+ G S +
Sbjct: 262 GFIKE-----YKIKELDPVMREGCKSCIDFTGLYSDISVGNVGTPE--GYST------VI 308
Query: 318 VRNERGK 324
+RN+ G+
Sbjct: 309 IRNKWGE 315
>gi|219853262|ref|YP_002467694.1| coenzyme F420 hydrogenase [Methanosphaerula palustris E1-9c]
gi|219547521|gb|ACL17971.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosphaerula palustris E1-9c]
Length = 341
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 30/207 (14%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
AR +EG Q G VT I + L+ G+++AVV V +D L P + + E ++
Sbjct: 88 ARAAFEIEGRQSGGAVTAILVNALEEGLIDAVVTVTADQWTML-PHSTVITSSEALITGA 146
Query: 184 GVKPTLSPNLNTLALVEAAGV----KRLLFCGVGCQVQVDNGTREGLDKFLKAASSE--- 236
G + L LA ++ A V KR+ GV C VQ R L+ +
Sbjct: 147 GSRYNWWVPL--LAALKEAVVTRKYKRIAIVGVPCVVQAVEQMRSSEHDLLRPYARAIRL 204
Query: 237 ---------------PETVLHYEF-MQDYKVHLKHLDGHIEEV----PYFCLPANDLVDV 276
E L +EF ++ +++ + G +E + +P DL D
Sbjct: 205 LIGLFCTESFDYQRLMEGKLVHEFSIEPWQIRKMDVKGVLEVLLKDGNAITIPLKDLADC 264
Query: 277 IAPSCYSCFDYTNALADLVVGYMGVPK 303
+ P C++C D T ADL G +G P+
Sbjct: 265 VRPGCHTCNDLTGVDADLSAGSVGSPE 291
>gi|73669779|ref|YP_305794.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|2463277|emb|CAA74097.1| F420-reducing hydrogenase isoenzyme I beta subunit [Methanosarcina
barkeri]
gi|72396941|gb|AAZ71214.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 50/263 (19%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ AQ GI T + + L+ G+++ + V D
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEQGIIDGAI-VAGKGDLPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ--------- 217
PRP +A + E++L A+ K +SP ++ L + G+ ++ GV CQ+Q
Sbjct: 61 PRPFVAMSREDILKAQRAKYNISPQISWLKEATRSFGLDKVGITGVCCQMQAVRKAQLYP 120
Query: 218 ------------------VDNGTREGLDKFLK-AASSEPETVLHYEFMQ-DYKVHLKHLD 257
+ N + + ++ A+ +V EF + + VH +
Sbjct: 121 INMRDVPGKVAFAVGLFCMVNFPYDSIQALVEDHANQSLSSVKKMEFGKGKFFVHTER-- 178
Query: 258 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
G++ VP + P C+ C DY + LAD+ G +G P G S +
Sbjct: 179 GNVATVPL-----KETHKYEQPGCHVCLDYVSNLADISTGSVGSP--GGWST------VF 225
Query: 318 VRNERGKEMLS--LVKNLLEITP 338
+R + G E+ S + + L E P
Sbjct: 226 IRTKVGNEIWSKAVAEGLFETKP 248
>gi|73667804|ref|YP_303819.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
gi|72394966|gb|AAZ69239.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
Length = 346
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+A ++K G+Q G+ + I + K G ++ V + D ++ + VL + E+V
Sbjct: 82 FFAARSKENAGSQDGGVTSGILKSLFKQGKIDCAVGITRD--EKWESKVVLLTSAEDVEK 139
Query: 182 AKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQVDNGTREG--------------- 225
+G K T P + AL EA R+ GV CQ RE
Sbjct: 140 VRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHSARLIRENVSEKIVLIIGLLCME 197
Query: 226 -------LDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 277
LDK + + + E V EF + K + DG + VP D+
Sbjct: 198 SFHHDVMLDKIIPEIMKVKIEDVRKMEFTKG-KFWVYTSDGEVHSVPI-----KDVAKYA 251
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 336
C+ C DYT+ AD+ VG +G P + +R + G+E +V+ +EI
Sbjct: 252 RNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTDAGEEYFEMVREEMEI 302
>gi|1706904|sp|Q00391.1|FRHB_METVO RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|809731|emb|CAA43499.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 280
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 66/254 (25%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T + ++ AQ G V+ I L++ +++ V V +D +D + P +
Sbjct: 3 FGNYKTAISARATDKEILKKAQDGGYVSAAHIYGLESKLLDGV-SVAADTEDGCNAAPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A TPEEVL A G K T+SPN++ L V ++++ G CQVQ
Sbjct: 62 ATTPEEVLNAAGAKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVQAIRKLIKYPMGFRH 121
Query: 218 -----------VDNGTREG------------LDKFLKAASSEPETVLHYEFMQDYKVHLK 254
++N + EG +D LK + + ++ ++ V LK
Sbjct: 122 TDSRIVMGIFCMENFSYEGMKAIVEEYAGIRMDDVLKTDIGKGKFWVYSKYGDVKSVKLK 181
Query: 255 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 314
D H+ E SC+ C DYT LAD+ G +G P G S
Sbjct: 182 --DTHMYE---------------QKSCHICTDYTAELADISTGSVGSPD--GWST----- 217
Query: 315 YITVRNERGKEMLS 328
I +R E+G+ ++
Sbjct: 218 -IFIRTEKGEAYIN 230
>gi|52548669|gb|AAU82518.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos18B6]
Length = 374
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 137
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC------QVQ 217
P +A ++LAA G K T P+++ + G K + G+ C +VQ
Sbjct: 138 --WIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQGMRKVQ 195
Query: 218 VDNGTREGLDK---FLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL------ 268
+ G G DK + SE M K L L IE+V F +
Sbjct: 196 LSKGFDVGADKVKLLIGLLCSETFD------MPMLKNKLLELGTQIEDVEKFNIKKGSFI 249
Query: 269 -----------PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 317
P ++ D + +C C+D+ AD+ VG +G G S +
Sbjct: 250 VYTKAGKELKTPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGWST------VI 301
Query: 318 VRNERGKEML 327
R++ GKE++
Sbjct: 302 TRSDAGKELV 311
>gi|20092529|ref|NP_618604.1| F420H2 dehydrogenase subunit F [Methanosarcina acetivorans C2A]
gi|19917799|gb|AAM07084.1| F(420)H(2) dehydrogenase, subunit FpoF [Methanosarcina acetivorans
C2A]
Length = 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+ ++K G+Q G+ + I + K G ++ V + + ++ P VL + E+V
Sbjct: 82 FFGARSKDNVGSQDGGVASGILKSLFKQGKIDCAVGITRN--EKWEPEVVLLTSAEDVER 139
Query: 182 AKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQVDNGTREGLDK-------FLKAA 233
+G K T P L AL EA R+ GV CQ + RE +++ L
Sbjct: 140 TRGTKYTSDPVL--AALREAFEKYDRIAVIGVPCQAHAAHLIRENVNEKIVLIIGLLCME 197
Query: 234 SSEPETVLHYEFMQDYKVHLKHL---------------DGHIEEVPYFCLPANDLVDVIA 278
S + +L + KV L+ + DG + VP D+
Sbjct: 198 SFHHDVMLEKIIPEILKVKLEDIRKMEFTKGKFWVYTKDGEVHSVPI-----KDVAKFAR 252
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 336
C+ C DYT+ AD+ VG +G P + +R E G++ +V+ +EI
Sbjct: 253 NPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKYFDMVREDMEI 302
>gi|159905671|ref|YP_001549333.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C6]
gi|159887164|gb|ABX02101.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus maripaludis
C6]
Length = 282
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTREGLDKF--------------- 229
L+ + + V G +++ F G CQVQ G R DK
Sbjct: 82 LSVIKSAVREYGCEKVGFVGTPCQVQSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF----CLPANDLVDVIAPSCYSC 284
+KA E H D V G + +P D SC+ C
Sbjct: 142 GMKAIVEE-----HCGIKMDDVVKTDIGKGKFWVYSKWGDVKTIPLKDTHPYEQISCHVC 196
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 197 MDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|296109197|ref|YP_003616146.1| coenzyme F420 hydrogenase, subunit beta [methanocaldococcus
infernus ME]
gi|295434011|gb|ADG13182.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
infernus ME]
Length = 282
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 37/220 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+T+ I L+ +++ VV +D +D P+P +A TPEEV+ A G K ++ PN
Sbjct: 24 AQDGGIVSTLFIYALENNILDGVVV--ADKEDEFLPKPKVATTPEEVIEAAGTKYSVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDY-- 249
+ + G +++ G CQ++ R+ + + E ++ M+++
Sbjct: 82 IAEIKKAAREYGCEKIGVVGTPCQIR---AVRKAMKYPVGFRGVNIEFLIGIFCMENFPY 138
Query: 250 ---KVHLKHLDG-HIEEVPYFCLPANDL-------------VDVIAP----SCYSCFDYT 288
+V ++ L G +E+V + + P SC+ C DYT
Sbjct: 139 NGLRVIVEELCGVKMEDVVKLDIGKGKFWVYTRWGETKTVKLKETHPYEQSSCHVCTDYT 198
Query: 289 NALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
LAD+ G +G P G S + +R +GKE+ S
Sbjct: 199 AELADVSTGSVGSP--DGWST------VFIRTVKGKEIFS 230
>gi|397780732|ref|YP_006545205.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939234|emb|CCJ36489.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 339
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG H +++ AR PVE Q G VT I + L G+++AVV V DP + P +
Sbjct: 78 LGPHLDIVAARSVFPVERKQSGGAVTAILVNALDEGLIDAVVTVTRDPWT-MKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKA 232
+ + ++ G + + P L +L V +R+ GV C + R + L+
Sbjct: 137 SSDALIQHAGSRYSWWVPLLASLKEAVVTRKYRRIAVVGVPCVARATQAIRASDHELLRP 196
Query: 233 ASSEPETVL--------HYEFMQDYKVHLKH---------------LDGHIEEVPYFCLP 269
+ V+ Y + + K+ + LD ++++ + +P
Sbjct: 197 YAKAIRLVIGLFCTETFDYAKLVEGKLESERRIEPWDIRRLDIKGKLDVYLQDERHISIP 256
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHPQYITVRNERGK 324
+L + + P C C D+T AD+ G +G P+ YT + +RN+ G+
Sbjct: 257 LAELEESVRPGCRVCTDFTAVEADVSAGAVGSPEGYT---------TLVIRNDIGR 303
>gi|150398835|ref|YP_001322602.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150011538|gb|ABR53990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G + + + AR T ++ +Q GI++ I L++G+++ V+ ++ + P+ +
Sbjct: 4 FGTYNKAISARATDKAILKKSQDGGIISASYIYGLESGLLDGVIVANTEKGFKAVPK--I 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDNGTREGLDKF-- 229
TPEEVL A G K T+SPN++ L V ++++ G CQVQ R+ L K+
Sbjct: 62 VTTPEEVLNAAGTKYTISPNVSVLKDAVREYALEKVGIVGTPCQVQ---AIRK-LIKYPM 117
Query: 230 -LKAASSEPETVLHYEFMQDY-----KVHLKHLDG---------HIEEVPYFCLPANDLV 274
+ S+ +L M+++ K ++ G I + ++ + V
Sbjct: 118 GFRHTDSKIALILGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKGKFWVYSKSGEV 177
Query: 275 DVIA---------PSCYSCFDYTNALADLVVGYMGVP 302
+A SC+ C DYT LAD+ G +G P
Sbjct: 178 KTVALKDTHMYEQKSCHVCMDYTAELADISTGSVGSP 214
>gi|52550138|gb|AAU83987.1| coenzyme F420-dependent oxidoreductase [uncultured archaeon
GZfos35B7]
Length = 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 38/259 (14%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++ + LGV+ + K Q G VT + L+ G+++ +D D+ P
Sbjct: 96 TVQEDVLGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAAD--DQWRP 153
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTRE---- 224
+ +A +++ A G K TL P++ + G + F G+ CQ+Q G R+
Sbjct: 154 KAKVATNYDDLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQ---GLRKVQMS 210
Query: 225 ------GLDKF-----LKAASSEPETVLHYEFMQDY-------KVHLKHLDGHIEEVPYF 266
G+DK L + E +L + + Y K +K D +
Sbjct: 211 EQPYDVGIDKLKLLIGLFCMENFREELLDF-IAEKYTKLENVSKCDIKGKDFSVYAKEKH 269
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 326
+P D+ D + C C D+T LAD+ VG +G + G S + VR+E+G+E+
Sbjct: 270 SIPLVDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST------VFVRSEKGEEL 321
Query: 327 L--SLVKNLLEITPTISSG 343
+ +L K +E+ G
Sbjct: 322 VKGALAKGYIEVKEIEDKG 340
>gi|52550015|gb|AAU83864.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured
archaeon GZfos34H10]
Length = 371
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 134
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTR 223
P +A ++LAA G K T P+++ + G K + G+ C +Q G R
Sbjct: 135 --WIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQ---GMR 189
Query: 224 E-GLDKFLKAASSEPETVLHYEFMQDY-----KVHLKHLDGHIEEVPYFCL--------- 268
+ L K + + ++ + + K L L IE+V F +
Sbjct: 190 KVQLSKGFDVGADNVKLLIGLLCSETFDMPMLKNKLLELGTQIEDVVKFNIKKGSFIVYT 249
Query: 269 --------PANDLVDVIAPSCYSCFDYTNALADLVVGYMG 300
P ++ D + +C C+D+ AD+ VG +G
Sbjct: 250 KAGKELKTPIKNMRDCVREACDYCYDFAAEFADVSVGSIG 289
>gi|150399446|ref|YP_001323213.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150012149|gb|ABR54601.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 33/197 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GI++ I L+ G+++ V+ +D +D+ + P +A T +EVL+A G K T PN
Sbjct: 24 SQDGGIISAAYIYGLENGLLDGVIV--ADKEDKFTAVPKVATTKDEVLSAAGTKYTTCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPET---VLHYEFMQD 248
L+ + + V G ++ F G CQ+Q R+ + K+ P+ ++ M++
Sbjct: 82 LSVIKSAVREYGCDKIGFVGTPCQIQ---SIRKAI-KYPIGYRHVPDKIALIMGIFCMEN 137
Query: 249 Y-----KVHLKHLDG-HIEEV--------PYFCLPANDLVDVIA---------PSCYSCF 285
+ K ++ L G +E+V ++ V +A SC+ C
Sbjct: 138 FPYNGMKTIVEELCGVRMEDVVKTDIGKGKFWVYTKWGDVKTVALKDTHPYEQVSCHICM 197
Query: 286 DYTNALADLVVGYMGVP 302
DYT LADL G +G P
Sbjct: 198 DYTAELADLSTGSVGSP 214
>gi|15678369|ref|NP_275484.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621398|gb|AAB84847.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 111 DDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
DD +G +EE + ++R + GA G+++ I I +L+ G+++ + + +P+ L P
Sbjct: 75 DDMLMGNYEECYIAHSRDDELRYGASSGGMISQILIYLLEEGLIDGALVTRMNPERPLEP 134
Query: 169 RPVLARTPEEVLAAKGVKPTLSP-NLNTLALVEAAGVKRLLFCGVGCQVQ 217
P +ARTP E++ ++G K P N+ ++E G R G+ C +
Sbjct: 135 EPFIARTPSEIIESRGSKYCPVPANVALKEILEVPG--RYAVVGLPCHIH 182
>gi|134045238|ref|YP_001096724.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132662863|gb|ABO34509.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAVPKVATTREEILSAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTREGLDKF--------------- 229
L+ + + V G +L F G CQV+ G R DK
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF----CLPANDLVDVIAPSCYSC 284
+KA E H D V G + +P D SC+ C
Sbjct: 142 GMKAIVEE-----HCGIKMDDVVKTDIGKGKFWVYSKWGDVKTVPLKDTHPYEQGSCHVC 196
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 197 MDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|307352754|ref|YP_003893805.1| coenzyme F420 hydrogenase subunit beta [Methanoplanus petrolearius
DSM 11571]
gi|307155987|gb|ADN35367.1| coenzyme F420 hydrogenase, subunit beta [Methanoplanus petrolearius
DSM 11571]
Length = 287
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 46/230 (20%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIVT + L+ G+++ + V + D+ P PV+A T E+LAA+G K T+SPN
Sbjct: 23 SQDGGIVTQLFTYALEEGIIDGAI-VAAPGDEPWKPEPVVATTKAELLAARGTKYTISPN 81
Query: 193 LNTLA-LVEAAGVKRLLFCGVGCQVQ---------------------------VDNGTRE 224
+ + + G+ ++ G CQ+Q ++N
Sbjct: 82 MMLIKEATRSYGLDKVGIVGTPCQMQALRKAQLYPMAMRKVPDKIALAIGIFCMENFPYM 141
Query: 225 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 282
GL+ ++ ++ E+ + + + + V+ + G + ++P L A + P C+
Sbjct: 142 GLETIVEDHCQTKMESAVKMDIGKGKFSVYTER--GALSQIP---LAATHKYE--QPGCH 194
Query: 283 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 332
C DY LAD+ G +G P G S + VR ++G+++ S N
Sbjct: 195 VCLDYVANLADVSTGSVGSPD--GWST------VFVRTKKGEDVWSKAVN 236
>gi|150402554|ref|YP_001329848.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C7]
gi|150033584|gb|ABR65697.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C7]
Length = 282
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 43/224 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILSAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTREGLDKF--------------- 229
L+ + + V G +++ F G CQV+ G R DK
Sbjct: 82 LSVVKSAVREYGCEKVGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 230 -LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF----CLPANDLVDVIAPSCYSC 284
+KA E H D V G + +P D SC+ C
Sbjct: 142 GMKAIVEE-----HCGIKMDDVVKTDIGKGKFWVYSKWGDVKTVPLKDTHPYEQMSCHVC 196
Query: 285 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 197 MDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|21226729|ref|NP_632651.1| F420H2 dehydrogenase subunit F [Methanosarcina mazei Go1]
gi|452209214|ref|YP_007489328.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
gi|20905018|gb|AAM30323.1| F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
gi|452099116|gb|AGF96056.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
Length = 346
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 45/248 (18%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
+ ELL RK +K G+Q G+ + I + G ++ V + + + P V
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITRN--ENWEPEVV 129
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQVDNGTREGL-DKF 229
L + E+V +G K T P + AL EA R+ GV CQ RE + +K
Sbjct: 130 LLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAARLIRENVNEKI 187
Query: 230 LKAASSEPETVLHYEFMQD------YKVHLKHL---------------DGHIEEVPYFCL 268
+ H++ M D KV+++ + DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTKDGEVHSVPI--- 244
Query: 269 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
D+ C+ C DYT+ AD+ VG +G P + +R E G++
Sbjct: 245 --KDIAKYARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKYFD 294
Query: 329 LVKNLLEI 336
+V++ +EI
Sbjct: 295 MVRDEMEI 302
>gi|282165082|ref|YP_003357467.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
gi|282157396|dbj|BAI62484.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
Length = 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++E+ L A+ K AQ G+VTT+ L+ G+++ + V + P+P +
Sbjct: 3 FGTYKEVMALKAKDGKIGGVAQDGGVVTTLLCYALEKGVIDGAL-VAGKSETPWMPKPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQVDN-------GTRE 224
A T EE++AA G K T+SP ++T+ G++++ G CQ+ G R
Sbjct: 62 ATTKEEIIAAAGTKYTISPVVSTIKDAAREYGLEKIAVVGTPCQIYAVQKMRLYGVGARH 121
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP--------YFCLPANDLVDV 276
DK A + ++ + V H IE V ++ A D+
Sbjct: 122 IPDKV--AMTVGIFCTENFSYAGLRTVIEDHCKVPIESVTKMEIGKGKFWVKGAKDVSIP 179
Query: 277 IAPS-------CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
I + C+ C D T AD+ G +G P G S T R+ RGK++LS
Sbjct: 180 IKETHKYEQDGCHVCSDLTAEFADISTGSIGTPD--GWSTT------FARSTRGKDLLS 230
>gi|355571436|ref|ZP_09042688.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
gi|354825824|gb|EHF10046.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
Length = 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ + AR T ++ AQ GIVT + L+ G+++ + V D+ PRP +
Sbjct: 5 LGKYKLCVSARSTDKAILKKAQDGGIVTQLFKFALEEGIIDGAI-VAGPGDEPWRPRPFI 63
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A T EE++ A G K +SP ++ + + G+ ++ G CQ+Q
Sbjct: 64 ATTVEELMTAGGTKYNISPQVSWIKEATRSYGLDKIGIVGTPCQMQAVRKGQLYPVGWRD 123
Query: 218 VDNGTREGLDKFLKAASS--------EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 269
VD+ + + F S E + E ++ ++ + + LP
Sbjct: 124 VDDKIKLAIGIFCMENFSYQSIRQLVEDHAAMKMEAVKKMEIGKGKFWVYGQRGQVVQLP 183
Query: 270 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
P+C+ C DY LAD+ G +G P
Sbjct: 184 LKVTHKYEQPACHVCLDYVANLADVSTGSVGSP 216
>gi|336476291|ref|YP_004615432.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929672|gb|AEH60213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 44/254 (17%)
Query: 105 RRKDSL--DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R KDSL ++ LG + ++ A+ + Q G VT + + L+TG+++AVV V DP
Sbjct: 69 RVKDSLIEENDLLGNYMCIMSAKSQLDIPRRQSGGAVTAMLVNALETGLIDAVVVVAEDP 128
Query: 163 DDRLSPRPVLARTPEEVLAAKGVK-----PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
L P + + V++ G + P +S LN + + + + GV C Q
Sbjct: 129 -WTLKPYSAVISDSDSVVSKAGSRYNWWVPLVSA-LNDAVIRQK--YRNIAVVGVPCVAQ 184
Query: 218 VDNGTREG-LDKFLKAASSE--------PETVLHYEFMQD----------YKVHLKHLDG 258
+ RE LD + S ET + + +++ +KV + G
Sbjct: 185 AISRIRESDLDLLMPFRDSIRLMIGLFCTETFDYVKLLEEKLSREHSILPFKVERFDVKG 244
Query: 259 HIE----EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHP 313
+E + P ++L D + P C C D+T +D+ G +G P YT
Sbjct: 245 KLEITLDDGNTITFPLSELEDCVRPGCNVCTDFTANYSDISAGSVGSPDGYT-------- 296
Query: 314 QYITVRNERGKEML 327
+ +R E+GK++L
Sbjct: 297 -TLIIRTEKGKKLL 309
>gi|308272003|emb|CBX28611.1| hypothetical protein N47_G39350 [uncultured Desulfobacterium sp.]
Length = 374
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 43/238 (18%)
Query: 122 LYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTPEE 178
L AR T P E A G+VT + + + + G ++ A+V +S R RP LA + EE
Sbjct: 90 LVARTTNPAIKERATDGGVVTALLLNLFEKGHIDGAIVTKESGLFQR---RPWLAHSKEE 146
Query: 179 VLAAKG--------------VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTRE 224
++ + G + T SP+ + + + + R+ F G CQV +
Sbjct: 147 IIGSAGFHFDASHGLQLFSELYSTYSPSFVKVGYISSKRLDRVAFVGTPCQVNTIRRIQA 206
Query: 225 ------------------GLDKFLKAASSEPETVLHYEFMQDYKVHLK-HLDGHI--EEV 263
G F + E + ++ + + K+++K HL H+ +E+
Sbjct: 207 LGIEPANSITIIFGLFCTGNFIFGPEQQHQLEKIGNFRWDEVNKINVKEHLMIHLRNKEI 266
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 321
+ L D + A C+ CFDY+ ADL G +G P+ +T+ Q V N+
Sbjct: 267 RHISLDQLDFMKRHA--CHYCFDYSAEFADLSFGGLGSPEGWTTVITRSLQGQAVLND 322
>gi|374628811|ref|ZP_09701196.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906924|gb|EHQ35028.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 287
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR ++ +Q GIVT + L+ G+++ + V D+ P PV+
Sbjct: 3 LGNYKSVISARAADAEILKRSQDGGIVTQLFAYALEEGIIDGAI-VAGPGDEPWKPEPVV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------------- 217
A T E+LAA+G + T+SPN+ + + G+ ++ G CQ+Q
Sbjct: 62 ATTRAELLAARGTRYTISPNMMLIKEATRSYGLDKVGIVGTPCQMQALRKAQLYPMAMRK 121
Query: 218 -------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 264
++N +GL+ + E + E + + E
Sbjct: 122 VPDKIALAIGIFCMENFPYQGLEAIV-----EDHCNVKMESADKMDIGKGKFSVYTERGA 176
Query: 265 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P P C+ C DY LAD+ G +G P
Sbjct: 177 ISQIPLKATHKYEQPGCHVCLDYVANLADVSTGSVGSP 214
>gi|148643181|ref|YP_001273694.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobrevibacter
smithii ATCC 35061]
gi|148552198|gb|ABQ87326.1| coenzyme F420-reducing hydrogenase, beta subunit, FrhB
[Methanobrevibacter smithii ATCC 35061]
Length = 285
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQ 217
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQ 107
>gi|222445412|ref|ZP_03607927.1| hypothetical protein METSMIALI_01048 [Methanobrevibacter smithii
DSM 2375]
gi|222434977|gb|EEE42142.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2375]
Length = 285
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQ 217
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQ 107
>gi|298528806|ref|ZP_07016210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
gi|298512458|gb|EFI36360.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
Length = 432
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 116/317 (36%), Gaps = 85/317 (26%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSR-------------------IEGLETVVHGR 103
D C CG C T+ A A DG+ R +E L+ ++
Sbjct: 15 DRCHMCGGCVTFCTAINYGALEIGEDGLPRYKDQNSCLECGICYMLCPEVEELDVEINSL 74
Query: 104 GRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
++ + +L AR + ++ A G VT I + ++++G ++ V S
Sbjct: 75 ANWEEPAGKI---ISSSILRARDRQVLDRATDGGAVTAILLHLMESGRIDGAVV--SRNK 129
Query: 164 DRLSPRPVLARTPEEVLAAKGVK--------------PTLSPNLNTLALVEAAGVKRLLF 209
+ P+LART E++L G T SP++ L V+ G + + F
Sbjct: 130 GLFNREPMLARTSEQILECCGSYFDVSHGTYHYGTQYSTYSPSVQALGDVKTQGFRSIAF 189
Query: 210 CGVGCQV-----------------------------QVDNGTREGLDKFLKAASSEPETV 240
G CQV + D+ +R+ L+K + + + + +
Sbjct: 190 VGTPCQVRTLRKMQALGVVPADAIYCVLGLFCTGNFEFDDNSRKRLEKTGEFSWKDVQKI 249
Query: 241 ----LHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 296
Y +MQD +H LP ++L + +C C DY+ LADL
Sbjct: 250 NVTDKVYIYMQDGSIH--------------ALPLDELDFIKRRACNYCHDYSAELADLSF 295
Query: 297 GYMGVPKYTGISMTQHP 313
G +G +T+ P
Sbjct: 296 GGVGSDDGWTTVLTRSP 312
>gi|261350026|ref|ZP_05975443.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
gi|288860812|gb|EFC93110.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
Length = 285
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQ 217
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQ 107
>gi|154151235|ref|YP_001404853.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153999787|gb|ABS56210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 340
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG H +L A+ T + Q G VT I L+ G+++AVV V DP L P +
Sbjct: 78 LGAHLDLFTAKSTFAIPHRQSGGAVTAILANALEQGLIDAVVTVTEDPWT-LKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCGVGCQVQVDNGTREGLDKFL 230
E ++ G + L LA ++ A + R + GV C VQ R + L
Sbjct: 137 KSEVLIREAGSRYGWWVPL--LAALKEACITRKYTKVAVIGVPCAVQAAARIRSSDNDLL 194
Query: 231 KAASSEPETV--------------LHYEFMQDYKV---HLKHLD--GHI----EEVPYFC 267
+ + V +H + + Y + +K LD G + ++ +
Sbjct: 195 RPYAKGIRLVVGLFCTETFDYAGLVHGKLEKKYHLAPHEIKKLDVKGKLDILKQDDSHLS 254
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P DL + I P C C D+++ ADL G +G P
Sbjct: 255 IPLADLEETIRPGCRICTDFSSLSADLSAGSVGSP 289
>gi|336121173|ref|YP_004575948.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|336121875|ref|YP_004576650.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|334855694|gb|AEH06170.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856396|gb|AEH06872.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
Length = 282
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV++ I L+ +++ V+ +D + P P +
Sbjct: 4 FGNYKTIISARATDKKILKKSQDGGIVSSAFIYGLENNLLDGVIV--ADKGEGCKPVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQV 216
A TPEEVL A G K T+ PN++ L + + G ++L G CQV
Sbjct: 62 ATTPEEVLKAGGTKYTVCPNISVLKSAIREYGCEKLGVVGTPCQV 106
>gi|397630808|gb|EJK69921.1| hypothetical protein THAOC_08779, partial [Thalassiosira
oceanica]
Length = 66
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Query: 48 KRSKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDAC 83
+ S+PI P G +PAKDHCSRCGLC+T Y+++V DAC
Sbjct: 28 RPSRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDAC 66
>gi|432330628|ref|YP_007248771.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
gi|432137337|gb|AGB02264.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
Length = 340
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 96/239 (40%), Gaps = 36/239 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + ELL AR V AQ G VT I G+++AVV V D L P +
Sbjct: 78 LGTYLELLSARSASEVPYAQSGGAVTAILAHAFDAGLIDAVVTVSED-RFTLKPSSAIIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL--ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
E +++ G + + P L L A+VE +R+ GV C VQ R + L+
Sbjct: 137 KSEALISVAGSRYSWWVPLLAALKTAVVEKK-YRRIAVVGVPCAVQALGKIRTSDNDLLR 195
Query: 232 --------------AASSEPETVLHYEFMQDYKV---HLKHLDGH----IEEV--PYFCL 268
S + +++H + K+ +K LD IE+ +
Sbjct: 196 PYAKAIRLVIGLFCTESFDYSSLIHTQLQVRNKIEPFQIKKLDVKGKLTIEKTDGSSTSI 255
Query: 269 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
P +L I C+SC D+T AD+ G +G P MT +RN GK +
Sbjct: 256 PLPELEACIRKGCHSCTDFTALDADISAGSVGSPA----GMTT----FLIRNTTGKAFV 306
>gi|297619513|ref|YP_003707618.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378490|gb|ADI36645.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 82/217 (37%), Gaps = 73/217 (33%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIV+ I L++G+++ V+ +D + P +A T +EVL+A G K T SPN
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV--ADKGEDFCAVPKVATTVDEVLSAAGTKYTTSPN 81
Query: 193 LNTLA-LVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 251
L+ L V G ++ F G CQVQ + K LK Y V
Sbjct: 82 LSVLKNAVREYGCDKVGFVGTPCQVQ-------SIRKMLK-----------------YPV 117
Query: 252 HLKHLDGHIEEV-PYFCL---PANDLVDVIAP---------------------------- 279
+H+ I V FC+ P N L ++
Sbjct: 118 GYRHVPDKIALVMGIFCMENFPYNGLKTIVEEHCGIKMEDVAKTDIGKGKFWVYSKWGDV 177
Query: 280 --------------SCYSCFDYTNALADLVVGYMGVP 302
SC+ C DYT LAD+ G +G P
Sbjct: 178 KTIKLKDTHPYEQQSCHVCMDYTAELADISTGSVGSP 214
>gi|312137255|ref|YP_004004592.1| coenzyme f420-reducing hydrogenase subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224974|gb|ADP77830.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanothermus
fervidus DSM 2088]
Length = 280
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 115 LGVHEELLYAR-KTKPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG + E + A+ K K ++ +Q G+V+ + I L+ G++E V V D+ P+P +
Sbjct: 3 LGKYVEAVAAKCKDKEIQKVSQDGGVVSGLLIYALEEGIIEGAV-VSKVTDEPWKPQPHI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDN-------GTRE 224
A T +E+LAA G K T+ PN+ + G+++L GV CQ+ G R
Sbjct: 62 ATTRDEILAAAGTKYTMCPNVWMIKEATRQYGIEKLGIVGVPCQIGAVRKMQTYPFGARF 121
Query: 225 GLDKF-----LKAASSEPETVLHYEFMQDYKVHLKHLDG-HIEEVPYFC--------LPA 270
DK + + P + L + + L +D I + ++ +P
Sbjct: 122 VPDKIKLIVGIYCMENFPYSSLETFVSEKMNLSLDIVDKMDIGKGKFWAYTVDETATIPL 181
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+ SC C DYT LAD+ G +G P
Sbjct: 182 KETHGYEQSSCKVCNDYTAELADISTGSVGTP 213
>gi|452211541|ref|YP_007491655.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
gi|452101443|gb|AGF98383.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
Length = 133
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ +Q GI TT+ + L+ G+++ + V D
Sbjct: 2 IEDPYLGKYTACVSARSTDREILKKSQDGGIATTLMVYALEQGIIDGAI-VTGKGDRPWE 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ 217
P+P +A + E++L A+G +SP ++ L + G+ R+ GV CQ+Q
Sbjct: 61 PKPFVAMSREDILKARGTIYNISPQISWLKEATRSYGLDRVGVTGVCCQMQ 111
>gi|44708|emb|CAA43503.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 282
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 93/283 (32%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIV+ I L++G+++ V+ D + P + T +EVL+A G K T SPN
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV--RDKGEDFCAIPKVLTTVDEVLSAAGTKYTTSPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 251
L+ L + V G ++ F G CQVQ + K LK Y V
Sbjct: 82 LSVLKSAVREYGCDKVGFVGTPCQVQ-------SIRKMLK-----------------YPV 117
Query: 252 HLKHLDGHIEEV-PYFCL---PANDLVDVIAP---------------------------- 279
+H+ I + FC+ P N L +I
Sbjct: 118 GYRHVPDKIALIMGIFCMENFPYNGLKTIIEEHCGIKMEDVAKTDIGKGKFWVYSKWGDV 177
Query: 280 --------------SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 325
SC+ C DYT LAD+ G +G P G S I +R +G+
Sbjct: 178 KTIKLKDTHPYEQHSCHVCMDYTAELADISTGSVGSPD--GWST------IFIRTAKGEA 229
Query: 326 MLSL--------VKNLLEITPTISSGDRRPFVMETVKADDNAK 360
+KN+ ++ P + ++ ++ K D+N K
Sbjct: 230 FYKAMEEAGVIEIKNIDDVKPGLGLVEK----LDNSKKDNNGK 268
>gi|147919452|ref|YP_686808.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocella
arvoryzae MRE50]
gi|110622204|emb|CAJ37482.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
Length = 286
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G+VT + L G+++ + V D P+PV+A T EE++AA G K T+SPN
Sbjct: 23 AQDGGVVTALLCYALDQGVIDGAI-VAGKSDTPWLPKPVVATTKEEIIAAAGTKYTISPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQV 216
+ + V G+ ++ G CQ+
Sbjct: 82 MAAIKTAVREYGLDKVALVGTPCQI 106
>gi|268323745|emb|CBH37333.1| conserved hypothetical protein, coenzyme F420-reducing hydrogenase
beta subunit related [uncultured archaeon]
Length = 360
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++ + LGV+ + K Q G VT + L+ G+++ +D D+ P
Sbjct: 96 TVQEDILGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAAD--DQWRP 153
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTRE---- 224
+ +A ++ A G K TL P++ + G + F G+ CQ+Q G R+
Sbjct: 154 KTKVATNNADLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQ---GLRKVQMS 210
Query: 225 ------GLDKF-----LKAASSEPETVLHY------EFMQDYKVHLKHLDGHIEEVPYFC 267
G+DK L + E +L Y + K +K + +
Sbjct: 211 EQPYDVGIDKLKLLIGLFCMENFREELLDYIAEKYTQLENVSKCDIKGKEFSVYANEKHS 270
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
+P D+ D + C C D+T LAD+ VG +G + G S + VR+E G+E++
Sbjct: 271 IPLEDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST------VFVRSESGEELV 322
>gi|333911073|ref|YP_004484806.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333751662|gb|AEF96741.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 109/275 (39%), Gaps = 85/275 (30%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D P +
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
A TPEEVL A G K T+ PN++ L + V ++++ G CQ++ + K +K
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIR-------AVRKLMK 114
Query: 232 AASSEPETVLHYEFMQDYKVHLKHLDGHI---------EEVPYFCLP-------ANDLVD 275
Y V +H D I E PY L + D
Sbjct: 115 -----------------YPVGFRHTDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMED 157
Query: 276 VI------------------------------APSCYSCFDYTNALADLVVGYMGVPKYT 305
V+ +C+ C DYT LAD+ G +G P
Sbjct: 158 VVKMDIGKGKFWVYTKWGETKAIKLKETHPYEQIACHVCTDYTAELADISTGSVGSPD-- 215
Query: 306 GISMTQHPQYITVRNERGKEMLS-LVKN-LLEITP 338
G S + VR RG+E + +V++ LEI P
Sbjct: 216 GWST------VFVRTIRGEEFFNKMVEDGYLEIKP 244
>gi|124484841|ref|YP_001029457.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocorpusculum
labreanum Z]
gi|124362382|gb|ABN06190.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanocorpusculum labreanum Z]
Length = 290
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIVT + L+TG+++ + V + P P++A T EE+ A++G K ++SPN
Sbjct: 24 SQDGGIVTAMFAYALETGIIDGAI-VAGPGAEPYKPEPMIATTVEELFASRGTKYSVSPN 82
Query: 193 LNTLALVEAA----GVKRLLFCGVGCQVQVDN-------GTREGLDKFLKAASSEPETVL 241
LAL++ A G+ ++ G CQ+Q G R+ DK A
Sbjct: 83 ---LALIKEATRSYGLDKIGIVGTPCQIQAVRKAQLYPIGLRDVPDKIALALGIFCMENF 139
Query: 242 HYEFMQDYKVHLKHLDGHIEEVPYF-----------------CLPANDLVDVIAPSCYSC 284
Y+ + +++ H I+ V +P P C+ C
Sbjct: 140 PYQGL--FQMVEDHCATKIDNVTKMDIGKGKFSVYTERGVNSQIPLKVTHKYEQPGCHVC 197
Query: 285 FDYTNALADLVVGYMGVP 302
DY +AD+ G +G P
Sbjct: 198 LDYVANMADISTGSVGTP 215
>gi|261403396|ref|YP_003247620.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
vulcanius M7]
gi|261370389|gb|ACX73138.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
vulcanius M7]
Length = 282
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ + + R P+ +
Sbjct: 4 FGTYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIVADNAGEFRAIPK--V 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ 217
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNVSVLKSAVREYGCEKIGVVGTPCQVR 107
>gi|333911656|ref|YP_004485389.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333752245|gb|AEF97324.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 85/275 (30%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D P +
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
A TPEEVL A G K T+ PN++ L + V ++++ G CQ++ + K +K
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIR-------AVRKLMK 114
Query: 232 AASSEPETVLHYEFMQDYKVHLKHLDGHI---------EEVPYFCLP-------ANDLVD 275
Y V +H D I E PY L + D
Sbjct: 115 -----------------YPVGFRHTDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMED 157
Query: 276 VI------------------------------APSCYSCFDYTNALADLVVGYMGVPKYT 305
V+ +C+ C DYT LAD+ G +G P
Sbjct: 158 VVKMDIGKGKFWVYTKWGETKAIKLKETHPYEQIACHVCTDYTAELADISTGSVGSPD-- 215
Query: 306 GISMTQHPQYITVRNERGKEMLS-LVKN-LLEITP 338
G S + VR +G+E + +V++ LEI P
Sbjct: 216 GWST------VFVRTTKGEEFFNKMVEDGYLEIKP 244
>gi|333910912|ref|YP_004484645.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333751501|gb|AEF96580.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 47/253 (18%)
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R K + +G + E+ A+ ++ AQ G VT I L G+++ + V D
Sbjct: 94 RTEEKLEIPIEEIGKYIEIFGAKSKMDIKYAQSGGAVTAILCNALDEGLIDGAIVVSED- 152
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQV-- 216
+ P+ VLA T EE++ A G + + P L AL EA V++L G C +
Sbjct: 153 KWTMEPKSVLATTKEELIKAAGSRYNWNVPILE--ALKEAVMVRKLEKLAIVGTPCVINA 210
Query: 217 --QVDNGTREGLDKFLKAASSE-----PETVLHYEFMQDYK------------------V 251
Q+ + L F KA + ET + E M K +
Sbjct: 211 VFQILASDNDLLRPFKKAIRLKIGLFCTETFKYSELMAKIKEMGINPWEIKKMEIKKGKL 270
Query: 252 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 311
+ L+G +E+P ++ + C C D+T ++D+ G +G P+ G++
Sbjct: 271 AIDLLNGETKEIPL-----KEIEYCVRKGCSVCRDFTALVSDISAGNVGTPE--GVTT-- 321
Query: 312 HPQYITVRNERGK 324
+ VRNE GK
Sbjct: 322 ----LIVRNEWGK 330
>gi|374635417|ref|ZP_09707016.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
gi|373562290|gb|EHP88505.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
Length = 282
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 85/275 (30%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T + ++ +Q GIV+ I L+ +++ VV +D +D P +
Sbjct: 4 FGKYKTVVSARATDKRILKKSQDGGIVSAAFIYGLENNLLDGVVV--ADKEDGFKAIPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
A TPEE+L A G K T+ PN++ L + V ++++ G CQ++ + K +K
Sbjct: 62 ATTPEEILEAGGTKYTVCPNISVLKSAVREYALEKVGVVGTPCQIR-------AVRKLMK 114
Query: 232 AASSEPETVLHYEFMQDYKVHLKHLDGHIE-EVPYFCL---PANDLVDVIAP-------- 279
Y V +H D I + FC+ P N L ++
Sbjct: 115 -----------------YPVGFRHTDSKIALLIGIFCMENFPYNGLKLIVEEHCNVKIED 157
Query: 280 ----------------------------------SCYSCFDYTNALADLVVGYMGVPKYT 305
+C+ C DYT LAD+ G +G P
Sbjct: 158 VVKMDIGKGKFWVYTKWGETKAIKLKETHPYEQIACHVCTDYTAELADISTGSVGSP--D 215
Query: 306 GISMTQHPQYITVRNERGKEMLS-LVKN-LLEITP 338
G S + +R RG+E + +V++ LE+ P
Sbjct: 216 GWST------VFIRTARGEEFFNKMVEDGYLEVKP 244
>gi|435850524|ref|YP_007312110.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661154|gb|AGB48580.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 340
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 50/234 (21%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP--- 162
R D LG + ++ A+ PV G Q G VT I + L+ GM++AVV V+ DP
Sbjct: 68 RLDPAPTEVLGQYLDIFSAKADIPVPGKQSGGAVTAILVNALEQGMIDAVVTVEEDPWTL 127
Query: 163 ---------DDRLSPR---------PVLARTPEEVLAAK--------------GVKPTLS 190
+D L + P+++ E V+ K V+ L
Sbjct: 128 KPSSTVITSEDVLINQAGSRYNWWVPLVSSLKEAVITRKYRKVAVVGVPCVVQAVRKMLD 187
Query: 191 PNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGL--DKFLKAASSEPETVLHYEFMQD 248
+ + L + L G+ C D E L +K ++ S EP ++ ++
Sbjct: 188 SDHDLLRPFRRS---IRLVVGLFCTETFD---YEKLVEEKLIRERSIEPLDMIRFDVKGK 241
Query: 249 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
++ +K DG + +P D+ D + P C C D+T +DL G +G P
Sbjct: 242 LEITMK--DGSLTMIPL-----KDVDDCVRPGCRVCTDFTAIYSDLSAGSVGSP 288
>gi|289192423|ref|YP_003458364.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
gi|288938873|gb|ADC69628.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
Length = 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D P +
Sbjct: 4 FGAYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ 217
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVR 107
>gi|304314405|ref|YP_003849552.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
gi|302587864|gb|ADL58239.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
Length = 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + E+L AR P+ Q G+VT + L+ G+V+ + V DP P PVLA
Sbjct: 270 LGEYTEILSARA--PMFRGQDGGVVTALLTYALREGIVDGALVVDRDPAMPWKPVPVLAE 327
Query: 175 TPEEVLAAKGVKPTLSPNLNTL 196
PE+V+ A G K ++ P L L
Sbjct: 328 DPEDVVRAAGTKYSVCPILKVL 349
>gi|374628017|ref|ZP_09700402.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
gi|373906130|gb|EHQ34234.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
Length = 338
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 41/257 (15%)
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLART 175
G + ++ AR + + G Q G V+ I ++ L+ G ++AV+ V D R P V+ +
Sbjct: 81 GEYRRIVPARSSFEITGKQSGGAVSAILLDGLERGTIDAVITVSEDGWTR-KPYSVMITS 139
Query: 176 PEEVLAAKGVKPTLSPNLNTLALVEAA-GVK--RLLFCGVGCQVQVDNGTREGLDKFLKA 232
E +L G + + T AL EA G K ++ G C VQ +E + +K
Sbjct: 140 KEAILMKAGSRYNWHVPVLT-ALNEAVVGRKYSKIAIVGTPCVVQAARLMKESTNDLVKP 198
Query: 233 ASSEPETVL--------HYEFMQDYKV---------HLKHLD--GHIE---EVPYFCLPA 270
+ ++ YE + + K+ ++ +D G +E + LP
Sbjct: 199 FGNAIRLIIGLFCTESFDYERLMEGKLKTDMNIEPWQIRRMDVKGKLEITTDGEVVDLPL 258
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT--VRNERGKEMLS 328
+L I C C D+T ++DL G +G P Y T +RN+ G+ +S
Sbjct: 259 AELDGCIKEGCRICTDFTGLMSDLSAGSVG----------SEPDYTTLVIRNDTGEGFVS 308
Query: 329 --LVKNLLEITPTISSG 343
++ LEI+ I+ G
Sbjct: 309 NAVMSGKLEISGDINLG 325
>gi|20093977|ref|NP_613824.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19886939|gb|AAM01754.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 55/280 (19%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
+G + E+ R T + E Q G T + L+ VEAV+ S + P PV+
Sbjct: 1 MGEYREVYLTRATDERIREHGQDGGTTTALLAHALEEDTVEAVIA--SSTVETWKPEPVI 58
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQ-------------- 217
P+E++ G K +SPN++ AL EA A + G CQ+
Sbjct: 59 VTDPDELIETAGSKYAISPNVS--ALNEAIASYDSVALVGTPCQITAVKKSKMYPYGLAN 116
Query: 218 -------------VDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEV 263
+N E L K L+ + E V + ++ V K+ D H
Sbjct: 117 VTERVKLTVGIFCTENFQYESLLKLLEDMGVDVENVERMDISHGEFIVRTKNGDVH---- 172
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
+ + L D +C C D+T AD+ VG +G P + + VR + G
Sbjct: 173 ---SVSVSKLGDYANEACNYCTDFTAEDADISVGSVGAPDGWNV--------VLVRTKEG 221
Query: 324 KEML--SLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 361
+++ ++ ++LE+ I GD P ++E + D ++
Sbjct: 222 EKVFRSAVDADVLEV-KDIGEGD--PNLLERLARDKKERI 258
>gi|15668202|ref|NP_246995.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2494430|sp|Q60341.1|FRHB_METJA RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|1590834|gb|AAB98011.1| coenzyme F420-reducing hydrogenase, beta subunit (frhB)
[Methanocaldococcus jannaschii DSM 2661]
Length = 287
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D P +
Sbjct: 9 FGSYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV--ADNAGEFKAVPKV 66
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ 217
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+
Sbjct: 67 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVR 112
>gi|410670515|ref|YP_006922886.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
gi|409169643|gb|AFV23518.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
Length = 386
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 37/234 (15%)
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
V + + R + ++ +G A+ P Q +VT++ L+ G+++ +
Sbjct: 103 VCYNQCPRTITTEEGLIGKIRHAYCAKTAIPDLKGQDGAVVTSMLAYALEEGLIDCAIVT 162
Query: 159 QSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ- 217
++ P PV+A+T +EVL A G + S + +L G++ + F G C +
Sbjct: 163 VKSEEEPWKPVPVIAKTYDEVLEAAGSIYSHSMTIESLMSAVKQGMRSIAFVGTSCNIDA 222
Query: 218 ---------------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 250
+D + EG+ +F+++ + E ++ K
Sbjct: 223 VYKMQKSPYGFLHLFMRANILKMGLFCMDTFSYEGIKEFVQSKD------MRLEDIESMK 276
Query: 251 VHLKHLDGHI-EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 303
+ L+ EE+ F L +L + SC C D T +DL G +G PK
Sbjct: 277 IRKGKLELQASEELKVFGL--EELDRYRSSSCKYCTDLTAESSDLSFGGVGTPK 328
>gi|256811179|ref|YP_003128548.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
fervens AG86]
gi|256794379|gb|ACV25048.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus fervens
AG86]
Length = 282
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ +Q GIV+T I L+ +++ VV +D P +
Sbjct: 4 FGAYKKVVSARSTLKEVLKKSQDGGIVSTAFIYGLENNLLDGVVV--ADNAGEFQAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ 217
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVR 107
>gi|337287125|ref|YP_004626598.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Thermodesulfatator indicus
DSM 15286]
gi|335359953|gb|AEH45634.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermodesulfatator indicus DSM 15286]
Length = 367
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 51/207 (24%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR---PVLARTPEEVLAAKGVK------- 186
G+VT + + + K GM++ V + R+SP P L + EEV+ A G
Sbjct: 105 GVVTALLVHLFKRGMIDGAVVAK-----RISPFKVVPSLVTSAEEVIEAAGFYHDVSAGV 159
Query: 187 -------PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPET 239
T +P+ + +KR+ G CQ+ + F K A SE
Sbjct: 160 QDWSEKYSTFAPSFEEMRPAMVEKLKRVAIVGTPCQIHTLRKMQ-----FFKVAPSETFY 214
Query: 240 VL-------HYEFMQDYKVHLKHLDG---------HIEEVPYFCL--------PANDLVD 275
+L H+ F + + L+ + G +I++ L P +++ D
Sbjct: 215 MLLGLFCSGHFNFDEAGRKKLEEIGGFKWDDIAKINIKDALIITLQNGEVKRIPLDEVED 274
Query: 276 VIAPSCYSCFDYTNALADLVVGYMGVP 302
+ P+C C DY AD+ G +G P
Sbjct: 275 LKRPACKFCEDYAAEFADISFGGIGAP 301
>gi|410722453|ref|ZP_11361740.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410596697|gb|EKQ51355.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 294
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 43/221 (19%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V V D P P++
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAV-VAGPSDVMWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPN---------------LNTLAL-VEAAGVKRL--------- 207
A + +E+LAA G K T SPN L T+A+ ++ G++++
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIRKMQSYPFGVKN 121
Query: 208 ------LFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 261
L G+ C ++N E L F+ + ++ + K ++ D +
Sbjct: 122 VADKIALMLGIFC---MENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWIETADQTL- 177
Query: 262 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P + C C DY LAD+ G +G P
Sbjct: 178 -----SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|408380956|ref|ZP_11178506.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
gi|407816221|gb|EKF86783.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
Length = 294
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 43/221 (19%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V V D P P++
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAV-VAGPSDVMWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPN---------------LNTLAL-VEAAGVKRL--------- 207
A + +E+LAA G K T SPN L T+A+ ++ G++++
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIRKMQSYPFGVKN 121
Query: 208 ------LFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 261
L G+ C ++N E L F+ + ++ + K ++ D +
Sbjct: 122 VASKIALMLGIFC---MENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWIETADQTL- 177
Query: 262 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P + C C DY LAD+ G +G P
Sbjct: 178 -----SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|268323845|emb|CBH37433.1| coenzyme F420-reducing hydrogenase, subunit beta related
[uncultured archaeon]
Length = 371
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + I +L+ G ++A V ++ D
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAVMEKAQDGGVVSALLIFLLEHGDIDAAVVSKTTED 134
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC------QVQ 217
P +A +++AA G K T P+++ + G + + G+ C +VQ
Sbjct: 135 --WVAEPFVATKKADIIAAAGSKYTQCPSVSGVGDALEQGYENVALVGLPCHIQGMRKVQ 192
Query: 218 VDNGTREGLDK---FLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL------ 268
G G D+ + SE M K L L IE+V F +
Sbjct: 193 QSTGFDVGSDRVKLLIGLLCSETFD------MPMLKNKLLELGTRIEDVEKFNIKKGSFI 246
Query: 269 -----------PANDLVDVIAPSCYSCFDYTNALADLVVGYMG 300
P ++ D + +C C+D+ AD+ VG +G
Sbjct: 247 VYTKAGKELKTPIKNMRDCVREACDYCYDFAAEFADVSVGSIG 289
>gi|224370425|ref|YP_002604589.1| putative coenzyme F420 hydrogenase subunit beta
(8-hydroxy-5-deazaflavin-reducing hydrogenase subunit
beta) (FRH) [Desulfobacterium autotrophicum HRM2]
gi|223693142|gb|ACN16425.1| putative coenzyme F420 hydrogenase, beta subunit
(8-hydroxy-5-deazaflavin-reducing hydrogenase, beta
subunit) (FRH) [Desulfobacterium autotrophicum HRM2]
Length = 369
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 100/266 (37%), Gaps = 52/266 (19%)
Query: 107 KDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEM--LKTGMVEAVVCVQSDPDD 164
K DT LG + E+ AR+ V + TT A+ M L+ G+++A V SD
Sbjct: 72 KTPWPDTPLGHYREIHMARRGNKVPQGHFQNGGTTSALVMSALEQGVIDAAVLTGSD--- 128
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTR- 223
L PRP L T EVL K +P + L G + L G CQ+ + R
Sbjct: 129 GLRPRPRLVTTALEVLDCTASKYIAAPTVACLNRATGKGYQNLGIVGTPCQMTGLSTLRT 188
Query: 224 --------------------------EGLDKFLKAASSEPETVLHYEFMQDYKVH-LKHL 256
EG +L +P +V E + L L
Sbjct: 189 NPLDLPDFKDVTGMTIGLFCTWALETEGFLDYLLQQGIDPASVQSMEIPPPPAENVLLTL 248
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
+ ++ LP ++ + P C C D T DL VG + + P +
Sbjct: 249 EKEVKT-----LPLAEIRKRVLPGCAVCPDMTALFCDLSVG----------AFEEDPAWN 293
Query: 317 T--VRNERGKEML--SLVKNLLEITP 338
T VR+ERG+ ++ ++ LEI P
Sbjct: 294 TLIVRSERGQALVDKAIETGFLEIRP 319
>gi|304315420|ref|YP_003850567.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
gi|302588879|gb|ADL59254.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 281
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V ++ P+P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGEEFWKPQPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------VDNGTRE 224
A + +E+ AA G K T SPN+ L V G+++L + CQ G R
Sbjct: 62 AMSSDELKAAAGTKYTFSPNVMMLKKAVRQYGIEKLGTVAIPCQTMGIRKMQTYPFGVRF 121
Query: 225 GLDKF-----LKAASSEPETVLHYEFMQDYKVHLKHLDG-HIEEVPYFCLPANDLVDV-- 276
DK + + P T L + V ++ ++ I + ++ +D++ +
Sbjct: 122 LADKIKLLVGIYCMENFPYTSLQTFICEKLGVSMELVEKMDIGKGKFWVYTQDDVLTLPL 181
Query: 277 ------IAPSCYSCFDYTNALADLVVGYMGVP 302
C C DY LAD+ G +G P
Sbjct: 182 KETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|149718|gb|AAA72190.1| F420 hydrogenase beta-subunit (frhB) [Methanothermobacter
thermautotrophicus]
Length = 281
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V + P P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGKEFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------VDNGTRE 224
A T +E+ AA G K T SPN+ L V G+++L + CQ G R
Sbjct: 62 AMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIRKAQTYPFGVRF 121
Query: 225 GLDKF-----LKAASSEPETVLHYEFMQDYKVHLKHLD----GHIEEVPY-----FCLPA 270
DK + + P T L + ++++ ++ G + Y + LP
Sbjct: 122 VADKIKLLVGIYCMENFPYTSLQTFICEKLGLNMELVEKMDIGKGKFWVYTQDDVYTLPL 181
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+ C C DY LAD+ G +G P
Sbjct: 182 KETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|15679299|ref|NP_276416.1| coenzyme F420-reducing hydrogenase subunit beta
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3334465|sp|P19499.4|FRHB_METTH RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2622404|gb|AAB85777.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 281
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V + P P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGKEFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQ-------VDNGTRE 224
A T +E+ AA G K T SPN+ L V G+++L + CQ G R
Sbjct: 62 AMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIRKAQTYPFGVRF 121
Query: 225 GLDKF-----LKAASSEPETVLHYEFMQDYKVHLKHLD----GHIEEVPY-----FCLPA 270
DK + + P T L + ++++ ++ G + Y + LP
Sbjct: 122 VADKIKLLVGIYCMENFPYTSLQTFICEKLGLNMELVEKMDIGKGKFWVYTQDDVYTLPL 181
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+ C C DY LAD+ G +G P
Sbjct: 182 KETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|333988462|ref|YP_004521069.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826606|gb|AEG19268.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
SWAN-1]
Length = 294
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 45/222 (20%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L +++ V V +D P P +
Sbjct: 3 LGTYKEVVTARSTDKQIQKIAQDGGIVSALFCYALDEKIIDGAV-VAGPGEDFWKPEPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNL---------------NTLAL-VEAAGVKRL--------- 207
A + +E+LAA G K T SPN+ T+A+ + G++++
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKQAVRQYGLEKVGTVAIPCQTMGIRKMQSYPFGVRF 121
Query: 208 ------LFCGVGCQVQVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHI 260
L G+ C ++N E L F+ + A PE V + + K + D I
Sbjct: 122 LADKIALLTGIFC---MENFPYESLKTFISEKAGVSPELVEKMDIGKG-KFFIHTADDVI 177
Query: 261 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
LP + C C DY LAD+ G +G P
Sbjct: 178 ------ALPLKETHGYEQNGCKVCLDYVAELADVSTGSVGSP 213
>gi|330508801|ref|YP_004385229.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
gi|328929609|gb|AEB69411.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
Length = 474
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 40/240 (16%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
D LGV+ EL AR ++G Q G+VT++ L G+++A V V ++ R
Sbjct: 205 DVDLGVYSELFAART--EIQG-QDGGVVTSLLARCLDKGVIDAAVVVYQRENN--GGRAA 259
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
E V+ AKG K L L G +R+ G CQ++V E LD F K
Sbjct: 260 AVDDIEGVIKAKGTKYVRVSALAPLIDALRGGKRRVAVVGTPCQIRVIRKL-EQLDYF-K 317
Query: 232 AASSEPETVL---------HYEFMQDYKVHLKHLD---------------GHIEEVPYFC 267
+ E L Y ++D+ L +D ++ + + C
Sbjct: 318 DEFPDAEIFLVGLFCFESFDYRRLRDHAKGLLGIDIEDADKIQIAKGRYIATLDGMEHSC 377
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
+L + I C C D + LAD+ +G +G + + VR+E+GK++L
Sbjct: 378 -SVRELENDIREGCRFCGDLVSRLADISIGSVG--------SAEGYSSVIVRSEKGKKLL 428
>gi|7649026|gb|AAF65743.1|AF228526_1 F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
Length = 346
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 45/248 (18%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
+ ELL RK +K G+Q G+ + I + G ++ V + + + P V
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITRN--ENWEPEVV 129
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQVDNGTREGL-DKF 229
L + E+V +G K T P + AL EA R+ GV CQ RE + +K
Sbjct: 130 LLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAARLIRENVNEKI 187
Query: 230 LKAASSEPETVLHYEFMQD------YKVHLKHL---------------DGHIEEVPYFCL 268
+ H++ M D KV+++ + DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTKDGEVHSVPI--- 244
Query: 269 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
D+ + C DYT+ AD+ VG +G P + +R E G++
Sbjct: 245 --KDIAKYERNPSHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKYFD 294
Query: 329 LVKNLLEI 336
+V++ +EI
Sbjct: 295 MVRDEMEI 302
>gi|325957979|ref|YP_004289445.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp. AL-21]
gi|325329411|gb|ADZ08473.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
AL-21]
Length = 294
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L+ +++ V V D P P++
Sbjct: 3 LGTYKEVVTARSTDKEIQKIAQDGGIVSALFCYALEEKLIDGAV-VAGPGKDFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPN---------------LNTLAL-VEAAGVKRL--------- 207
A+T +E+LAA G K T SPN + T+A+ +A G++++
Sbjct: 62 AQTADEILAAAGTKYTFSPNVLMLKKAVRQYGLEKVGTVAIPCQAMGIRKMQSYPFGVRF 121
Query: 208 ------LFCGVGCQVQVDNGTREGLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGH 259
L G+ C ++N L F+ + PE V + + + VH
Sbjct: 122 LADKIALLTGIFC---MENFPFASLQTFISEKMGVSPELVEKMDIGKGKFWVHTAD---- 174
Query: 260 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+P + C C DY LAD+ G +G P
Sbjct: 175 ----DVLSIPLKETHGYEQSGCKVCLDYVAELADVSTGSVGSP 213
>gi|379011201|ref|YP_005269013.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
gi|375301990|gb|AFA48124.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
Length = 390
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 63 DHCSRCGLCDTYYIAHVKDA-CAFLGDGMSRIEGLE---TVVHGRGRRKDSLDDTYLGVH 118
++C+ CGLC + +D F + E LE + G DDT G +
Sbjct: 8 EYCTGCGLCHSVNDTRFQDEPNGFTYPVIENNEQLEFNSKICQANGTHLLKQDDTTWGHY 67
Query: 119 EELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTP 176
+ Y+ T+ A G+ T +A+ + + G+V+ V+ V DPD + +++T
Sbjct: 68 FNVYSGYSTDTEIRFKAASGGMTTAVAVYLAERGLVDGVIQVGEDPDSPYGTKNFVSKTK 127
Query: 177 EEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKF 229
EE+++ G + +S L L V + G K + G C + V N + +F
Sbjct: 128 EEIVSHCGSRYIVSSPLANLQQVLSNGGKYAVI-GRPCDIVVLNNYLDNYPQF 179
>gi|20093305|ref|NP_619380.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
gi|19918663|gb|AAM07860.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
Length = 387
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 87/227 (38%), Gaps = 36/227 (15%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R + ++ +G A+ P Q G+VT++ + L G+++ V ++
Sbjct: 110 RTITTEEGLIGSFRYAYAAKSAIPEMKGQDGGVVTSLLLYALDEGLIDCAVVTTRSKEEP 169
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------- 217
P P +A+T EE+L + G + S L L G+ + F G C +
Sbjct: 170 WKPIPKVAKTREEILESGGSIYSHSMTLEALMSAIKQGMHSIAFVGTSCNIDAVTKMQKS 229
Query: 218 --------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHL 256
+D T EG+ L++ E V + + +++ LK
Sbjct: 230 SYGLLHLFMRAKILKLGLFCMDTFTYEGIKAVLESYGIALENVEAMKIRKGKFEITLKDG 289
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 303
H+ E+ +D + + SC C D + AD+ G +G P+
Sbjct: 290 KEHVLEL-------SDFDEYRSSSCQFCTDLASENADISFGGVGSPE 329
>gi|390961312|ref|YP_006425146.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
gi|390519620|gb|AFL95352.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
Length = 276
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 36/220 (16%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G VT + L+ G+++ +V S L V+ART EE+L G + ++ P +
Sbjct: 34 GAVTAMLTYALEKGLIDGIVT--SKRTKGLEGEAVVARTKEELLETAGNRWSIVPFAARI 91
Query: 197 -ALVEAAGVKRLLFCGVGCQVQ------------VDNGTR-EGLDKFLKAASSEPETVLH 242
A +E +K++ + CQ Q D G R + + E L+
Sbjct: 92 KAKIEEEDLKKVAVVCLPCQAQFFGQMRDFPILEADFGNRIRYIVSLFCMGTFAFEAFLN 151
Query: 243 Y---------EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 293
Y E + D K+ L+ H E +P + + C C DYT +D
Sbjct: 152 YLRVKYGVRAEEIVDIKLTRDFLEIH-RESGVLTIPLREAFSYLQTGCLVCSDYTGVWSD 210
Query: 294 LVVGYM-GVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 332
+ G++ P +T I RN+RG+E++ +N
Sbjct: 211 ISAGFVESEPGWT---------VIITRNQRGEELVRGAEN 241
>gi|435851521|ref|YP_007313107.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662151|gb|AGB49577.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 386
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET---VVHGRGR 105
R+ I PG C+ CG C A + D+ + L +G ++ G T V + +
Sbjct: 63 RNDIIKPG-------ICTMCGAC-----ASICDSIS-LEEGQPKLTGKCTACGVCYNQCP 109
Query: 106 RKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R + ++ +G + A+ K ++G Q G+VT + L+ G+++ + S ++
Sbjct: 110 RTITTEEGLIGCLRQAYAAKSNLKEIKG-QDGGVVTAMLAYGLEEGLIDCAIVTASSDEE 168
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV----QVDN 220
P P++ART E++L + G + S ++ L G+ + F G C + ++
Sbjct: 169 PWKPVPIVARTYEDLLQSSGSIYSHSMTMDALMSAIRQGMNSIAFVGPSCNIDAVHKMQR 228
Query: 221 GTREGLDKFLKA 232
+R L F++A
Sbjct: 229 SSRGFLHMFMRA 240
>gi|262192428|ref|ZP_06050580.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
gi|262031692|gb|EEY50278.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
Length = 403
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNT 195
GI++ AI +L+ G+V+ V+ +++ + L +++T +EVL+A G + + SP +N
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKASDEKPLLNVATISKTADEVLSAAGSRYSPASPLINL 159
Query: 196 LALVEAAGVKRLLFCGVGCQVQ------------------------VDNGTREGLDKFLK 231
+ +V+ ++ F G C V +REG++ L
Sbjct: 160 VQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTPSREGVEAVLD 219
Query: 232 AASSEPETVLHYEFMQDY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN 289
+ +P+ ++ ++F + + I+E+ Y N L I C C D
Sbjct: 220 RLNVKPQDIIKFDFRGNGWPGKTVATTRSSIKEMSYNDSWGNILGPTIQHRCKICADGIG 279
Query: 290 ALADLV 295
ADLV
Sbjct: 280 ENADLV 285
>gi|448406549|ref|ZP_21573003.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
gi|445677120|gb|ELZ29623.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
Length = 551
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 91/252 (36%), Gaps = 68/252 (26%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
EGAQ G+VT++ + +L+ G ++ + DD LA TPEE + G +
Sbjct: 264 EGAQDGGLVTSVLVHLLEAGEIDGALIATESDDDPWKAEAFLATTPEECIDNAGSVYNQT 323
Query: 191 PNLNTLAL----------VEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEP--- 237
L TL L +E A L G C+++ G R D + S E
Sbjct: 324 MALGTLDLERWDHKLDVPIEEAS---LALVGTPCEIE---GIRALEDFEWEYGSQEAGVR 377
Query: 238 ----------------ETVLHYEFMQDYKVHLKH------LDGHI------------EEV 263
E ++ + ++ V L LDG + E+V
Sbjct: 378 AIDYRIALMCTKNFNYERLMGEQLVEQRDVDLDDVGKMDVLDGKMLVYDREGELIVDEDV 437
Query: 264 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
+F D C C D+T ADL VG +G + + VR E+G
Sbjct: 438 EHF-------HDAALKGCDECADFTGYCADLTVGSVG--------SSDEYSSVIVRTEQG 482
Query: 324 KEMLSLVKNLLE 335
+ +L K L+
Sbjct: 483 LDAWNLTKGDLD 494
>gi|73668420|ref|YP_304435.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina barkeri str.
Fusaro]
gi|72395582|gb|AAZ69855.1| coenzyme F420 hydrogenase, beta subunit [Methanosarcina barkeri
str. Fusaro]
Length = 387
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 109/284 (38%), Gaps = 35/284 (12%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLG--DGMSRIEG---LETVVHGRGRRKDSLDDTYLGVHE 119
C+ CG C +C ++ DG ++ G V + + R + ++ +G
Sbjct: 72 CTLCGACAA--------SCEYITIEDGTPKLVGPCKACGVCYYQCPRTITTEEGLIGSFR 123
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
AR P Q G+VT++ + L G++++ V ++ P PV+A+ EE+
Sbjct: 124 FAYAARSAIPEIKGQDGGVVTSLLLYALDEGLIDSAVVTTRSKEEPWKPVPVVAKKREEI 183
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV----QVDNGTREGLDKFLKAASS 235
L + G + S L L G+ + F G C + ++ + L F++A
Sbjct: 184 LESSGSIYSHSMTLEALMSAIKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRAKVL 243
Query: 236 E----PETVLHYE----FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI---------- 277
+ YE + Y + L+++D F + D I
Sbjct: 244 KLGLFCMDTFSYEGIKAVLGSYGITLENVDAMKIRKGRFEVTLKDGKQQIFDLSEFDEYR 303
Query: 278 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 321
+ SC C D T +D+ G +G P+ +T+ + NE
Sbjct: 304 SSSCRFCTDLTAENSDISFGGVGSPRGWTTVLTRSALGYEIFNE 347
>gi|15678221|ref|NP_275336.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621237|gb|AAB84699.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 352
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 113 TYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
T LG + E+L AR P+ Q G+VT + L+ G+++ + V D + P PVL
Sbjct: 269 TPLGEYIEILSARA--PMFRGQDGGVVTALLTYALREGIIDGALVVDRDQERPWKPLPVL 326
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL 196
A P++++ A G K + P L L
Sbjct: 327 AEEPQDIVKAAGTKYSACPLLKVL 350
>gi|21227327|ref|NP_633249.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1]
gi|452209810|ref|YP_007489924.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
gi|20905682|gb|AAM30921.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
gi|452099712|gb|AGF96652.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
Length = 387
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 37/232 (15%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R + ++ +G A+ P Q G+VT++ + L G+++ V ++
Sbjct: 110 RTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVVTVHSEEEP 169
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------- 217
P P++A+T EE+L + G + S L L G+ + F G C +
Sbjct: 170 WKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKS 229
Query: 218 --------------------VDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHL 256
+D EG+ L++ + V + + ++V LK
Sbjct: 230 SYGFLHLFMRAKVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDG 289
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGI 307
HI E+ F + + SC C D T +D+ G +G P+ YT +
Sbjct: 290 KEHIFELSEF-------DEYRSSSCRFCTDLTAENSDISFGGVGSPRGYTTV 334
>gi|20094236|ref|NP_614083.1| bifunctional coenzyme F420-reducing hydrogenase subunit
beta/oxidoreductase [Methanopyrus kandleri AV19]
gi|19887267|gb|AAM02013.1| Coenzyme F420-reducing hydrogenase, beta subunit fused to
oxidoreductase related to nitrite reductase
[Methanopyrus kandleri AV19]
Length = 668
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 92/238 (38%), Gaps = 56/238 (23%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
E Q G VT +A L+ G+ +AVV V + P + PE+V G K T
Sbjct: 113 ELGQDGGAVTALARYALEEGLADAVVGVTAG--SAWKPCVTVVEDPEKVKDLAGSKYTRV 170
Query: 191 PNLNTLALVEAAGVKRLLFCGVGCQVQ----------VDNGTR----------------- 223
+ LA G++R+L G+ CQV V G R
Sbjct: 171 GLVEALAEAADRGIERVLAIGLPCQVNGLAKIQHFEIVAKGARALRNIDGSPAEKLPEVV 230
Query: 224 -------------EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 270
EGL K L+ + E V ++ K+ ++ G +E
Sbjct: 231 ATIGLFCTKNFEYEGLVKLLREKGVDIEDVERFDITSG-KLRVEISGGETKE-----YDV 284
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
+ + I C C D+T LAD+ VG +G P+ G++ + +R+E G+E++
Sbjct: 285 KEFEEAIPEGCRICNDFTARLADVSVGSVGTPE--GVTT------LLIRSETGEELVE 334
>gi|383320545|ref|YP_005381386.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
gi|379321915|gb|AFD00868.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
Length = 299
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++E+ L A+ +K +Q G+VT + L G+++ + V + P+P +
Sbjct: 3 FGTYKEVMALKAKDSKITGVSQDGGVVTALLCYALDKGVIDGAL-VAGKGETPWLPKPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQ-------------- 217
A T EE++AA G K T++P ++ + V G+++L G CQ+
Sbjct: 62 ATTKEEIMAAAGTKYTINPVVSVIKDAVREQGLEKLAVVGTPCQIYAVQKMRLYPVGARH 121
Query: 218 -------------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 264
+N + GL ++ P + + K +K +
Sbjct: 122 IPDKIALTIGIFCTENFSYAGLRTIIEDHCKVPVDSVTKMEIGGGKFKVKAAGKEV---- 177
Query: 265 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 324
+P + C+ C D T AD+ G +G P+ T R +GK
Sbjct: 178 --AIPIKETHKYEQEGCHVCSDLTAEFADISTGSIGTPEGWSTVFT--------RTTKGK 227
Query: 325 EMLS 328
++L+
Sbjct: 228 DLLA 231
>gi|254443100|ref|ZP_05056576.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
gi|198257408|gb|EDY81716.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 137 GIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNT 195
GIVT +L+T VE A+VC + + R +ART EE+ A+ K P L
Sbjct: 43 GIVTATLCYLLETEQVEGALVCSSDFANGEFNFRLSIARTREELFEAQSSKYFDIPVLKG 102
Query: 196 LALVEA------------------------------AGVKRLLFCGVGCQVQVDNGTREG 225
L LV+A G + LFCG N +E
Sbjct: 103 LDLVKAFEGKVAVVGLPSQINSLTRRMSKNKLLREKIGFRIALFCG-------HNSKKEL 155
Query: 226 LDKFLKAASSEPETVLHYEFMQDY---KVHLKHLDGHIEEVPYFCLPANDLVDVIA-PSC 281
+++ + +P+ + + + Q + ++ L DG ++ P+ + +++ C
Sbjct: 156 IERVWEKKGIDPKKIDRFRYRQGHWRGQMELTMKDGSVQRFPFQDFSHYQNLHILSLDRC 215
Query: 282 YSCFDYTNALADLVVG 297
+C D+ +DL G
Sbjct: 216 LNCHDHMGYYSDLSTG 231
>gi|269926440|ref|YP_003323063.1| coenzyme F420 hydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269790100|gb|ACZ42241.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 396
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 92/251 (36%), Gaps = 35/251 (13%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG E AR + ++G Q G+VT + I +++ G ++ + + P +AR
Sbjct: 96 LGTILESYTARVSPYIDGVQDGGVVTALLIALMEAGEIDGALLARESKTTPWKAEPFIAR 155
Query: 175 TPEEVLAAKGVKPTLSPNLNTLAL--VEAAGVKRLLFCGVGCQVQV--------DNGTRE 224
TPEEV+ G + L+ L L + ++ G C++Q N
Sbjct: 156 TPEEVIECAGSFYNQTMALSHLDLKKYKLGPDAKIALVGTPCEIQTLKAMQARPWNWGSS 215
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLK-----HLDGHIEEVPYFCL----------- 268
+D + + +YE + ++ K H G ++ + L
Sbjct: 216 NVDAVVLTIALLCTKNFNYEKLMVQEIERKRGIPLHQIGKVDVIRGKMLVYDHEGNTLID 275
Query: 269 -PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
P D C C D+ AD+ VG +G G S + +R + GK
Sbjct: 276 EPVKDFHGAALKGCDECADFLGRTADISVGSVG--SADGYSS------VLIRTQAGKRAF 327
Query: 328 SLVKNLLEITP 338
K LE+ P
Sbjct: 328 EYAKPKLELRP 338
>gi|158521163|ref|YP_001529033.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Desulfococcus
oleovorans Hxd3]
gi|158509989|gb|ABW66956.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfococcus oleovorans Hxd3]
Length = 364
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 52/250 (20%)
Query: 120 ELLYARKTKPVEGAQWT--GIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTP 176
EL AR PV + T G VT + + + TG ++ A+V ++DP S P LA T
Sbjct: 86 ELTAARALDPVVRKKATDGGAVTAVLLHLFDTGRIDGAIVTRRTDP---FSREPHLATTR 142
Query: 177 EEVLAAKGV--------------KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGT 222
+E++A+ G T SP++ V G+ R+ G CQ++
Sbjct: 143 DEIIASAGFFMDTSHGMKHFGHDYSTYSPSVQEFRPVLEKGLSRIALVGTPCQIEAVRKI 202
Query: 223 R------------------EGLDKFLKAASSEPETVLHYEFMQDYKVHLKH------LDG 258
G F + E V +++ ++++K +G
Sbjct: 203 EVLGIVPSDSIKFCLGLFCSGNFSFTDKEKDQMEAVGGFQWDAVTRINIKDNFMVYLSNG 262
Query: 259 HIEEVPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYI 316
+ +P D VD + +C+ C DY AD+ G +G +T+ P
Sbjct: 263 KVLSIPL------DKVDFMKRFACHFCMDYAAEYADISFGGIGAKDGWTTVITRTPLGRA 316
Query: 317 TVRNERGKEM 326
+ + RGK +
Sbjct: 317 VMADARGKTL 326
>gi|253578782|ref|ZP_04856053.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849725|gb|EES77684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 395
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 119/309 (38%), Gaps = 56/309 (18%)
Query: 64 HCSRCGLCDTYYIAHVK--DACAFLGDGMSRIEGLET------VVHGRGRRKDSLDDTYL 115
+C+ CGLC + +K D F + + E LE V + +G++K D +
Sbjct: 11 YCTGCGLCHSVQGTELKMIDG-GFPNVDVKKGESLEFYHSVCPVFYYKGKQKH---DIWG 66
Query: 116 GVHEELL-YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+ + L+ Y+ K A G +T I +L+ V+A++ DPDD+ ++
Sbjct: 67 NIEKALIGYSSNKKIRFKAASGGALTEICCYLLENKKVDAIIHTTYDPDDQTKTISCVST 126
Query: 175 TPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKA- 232
T EEV++ G + +S P + L +V++ K+ F G C V +K K
Sbjct: 127 TVEEVISRCGSRYGISVPLKDILQIVQSD--KKYAFVGKPCDVMALRRYLNKNEKLTKNI 184
Query: 233 -------ASSEPETVLHYEFMQ---------DYKVH----------LKHLDGHIEEVPYF 266
+ EP E ++ D V+ + DG ++ Y
Sbjct: 185 IYLLSFFCAGEPSVNAQDELLKKMGTSRQGCDTLVYRGNGWPGFTTVNTKDGRELKMEYK 244
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY--------ITV 318
L I C C D T LAD+V + + HP + I
Sbjct: 245 VAWGQYLGRDIRYICRFCMDGTGELADIV-----CADFWQLDNNNHPDFSEHEGRNIIIA 299
Query: 319 RNERGKEML 327
RNE GK++L
Sbjct: 300 RNELGKQLL 308
>gi|108803806|ref|YP_643743.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Rubrobacter xylanophilus DSM 9941]
gi|108765049|gb|ABG03931.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rubrobacter xylanophilus DSM 9941]
Length = 400
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 95/255 (37%), Gaps = 43/255 (16%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG E AR + + G Q G+V+ + I +L+ G ++ + + + LAR
Sbjct: 100 LGRVHESYTARVREDIPGVQDGGVVSALLIALLEAGEIDGALVARESDREPWKGEAFLAR 159
Query: 175 TPEEVLAAKG--VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKA 232
TPEEV A G TL+ L E R+ G C+V+ G R + K
Sbjct: 160 TPEEVREAAGSFYNQTLALGHLDLKGYELPPNPRIAVVGTPCEVE---GIRAMQARPWKW 216
Query: 233 ASSEPETV----------------LHYEFMQDYK-VHLKHLDGHIEEVPYFCL------- 268
SS E V L E ++D + V L + G ++ + +
Sbjct: 217 GSSRVEAVVLTVALLCTKSFNYEKLMLEELRDRRGVDLGEV-GRVDVIRGKLIVQDRGGR 275
Query: 269 -----PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 323
P D C C D+ AD+ VG +G G S + +R E G
Sbjct: 276 TILEEPIKDFHGAALKGCDECADFLGHAADISVGSVG--SADGYS------SVLIRTEEG 327
Query: 324 KEMLSLVKNLLEITP 338
V++ LE+ P
Sbjct: 328 LAAFEHVRDRLELRP 342
>gi|395646623|ref|ZP_10434483.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395443363|gb|EJG08120.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 341
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 92/259 (35%), Gaps = 48/259 (18%)
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD-----PDD 164
+ T LG + E + AR T V G Q G VT I L G+++AVV V D P
Sbjct: 74 VSSTLLGEYLEAITARATFAVPGKQSGGAVTAILAHALDAGLIDAVVTVSEDHWTKKPAS 133
Query: 165 RLSPR----------------PVLARTPEEVLAAKGVKPTLSPNL-----------NTLA 197
+ R P+LA E V+ K + + +
Sbjct: 134 TVITRREVLVAQAGSRYNWWVPMLAALKEAVIVRKYRRVAVVAVPCAAAAVARMRESDFD 193
Query: 198 LVEAAGVKRLLFCGVGCQVQVDNGT-REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 256
L+ G L G+ C D G EG K EP V + K+ +
Sbjct: 194 LLAPYGRAVRLLVGLFCTESFDYGKLMEG--KIRGELGIEPWEVSRLDVKG--KLEVTTT 249
Query: 257 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 316
DG + ++P DL I C+ C D+ AD+ G +G P+ + + P
Sbjct: 250 DGRVLDIPL-----KDLEACIPSGCHHCTDFAAVAADISAGAVGSPQGYTTLLVRTP--- 301
Query: 317 TVRNERGKEMLSLVKNLLE 335
RG +L LLE
Sbjct: 302 ---TGRGFVESALAAGLLE 317
>gi|298674974|ref|YP_003726724.1| coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
gi|298287962|gb|ADI73928.1| Coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
Length = 386
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKP 187
K +EG Q +VT++ L G+++ + + ++ P P++A + EE++ A+G K
Sbjct: 133 KGLEG-QDGAVVTSMLAYALDEGLIDCAIVTTTSNEEPWKPIPIVATSYEELVKARGSKY 191
Query: 188 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREG----LDKFLKAASSE----PET 239
S + L G++ + F G C + ++ L F++A +
Sbjct: 192 IHSMTMEALMGAIQEGMRSIAFVGTSCNIDAVTKMQKSPYGFLHMFMRANILKLGLFCMD 251
Query: 240 VLHY----EFMQDYKVHLKHLD------GHIE-----EVPYFCLPANDLVDVIAPSCYSC 284
+Y EF++++ + L+ +D G E EV + L +D + SC C
Sbjct: 252 TFYYDGIKEFVENHGMKLEAIDSMKIRKGRFEFYMGDEVRSYNL--SDFDSYRSSSCRFC 309
Query: 285 FDYTNALADLVVGYMGVP 302
D + AD+ G +G P
Sbjct: 310 TDLASENADISFGGIGSP 327
>gi|417822428|ref|ZP_12469027.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
gi|340049528|gb|EGR10443.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
Length = 268
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNT 195
GI++ AI +L+ G+V+ V+ +++ + L +++T +EVL+A G + + SP +N
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKASDEKPLLNVATISKTADEVLSAAGSRYSPASPLINL 159
Query: 196 LALVEAAGVKRLLFCGVGCQVQ------------------------VDNGTREGLDKFLK 231
+ +V+ ++ F G C V +REG++ L
Sbjct: 160 VQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTPSREGVEAVLD 219
Query: 232 AASSEPETVLHYEF 245
+ +P+ ++ ++F
Sbjct: 220 RLNVKPQDIIKFDF 233
>gi|332880884|ref|ZP_08448554.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357044756|ref|ZP_09106403.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
gi|332681058|gb|EGJ53985.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355532201|gb|EHH01587.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
Length = 419
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 82/223 (36%), Gaps = 38/223 (17%)
Query: 113 TYLG--VHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
TY+G +E+L Y T G+VT +L+ +++ V V ++ +P
Sbjct: 90 TYVGHSTNEDLRYHAAT--------GGMVTQFLTYLLEKKLIDGAVVVGYSEENPFEAKP 141
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ------------- 217
+A+ EE+ +K K ++ + + +KRL G+ C +Q
Sbjct: 142 FIAKNAEEIHDSKSSKYVVTSMDKVVTEILNTDLKRLAMVGLPCHIQGMRKLAEKNRLIH 201
Query: 218 -----------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV-HLKHLDGH---IEE 262
N TR LD +L V + F D + +K D + I++
Sbjct: 202 DKIAVFAAIYCSVNKTRHSLDYYLYRYKVNKNDVGKFSFRDDGCMGFMKFTDKNGNTIKK 261
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 305
VPY C C D LAD+ G + + Y+
Sbjct: 262 VPYMSYWFGTHSFFANSRCSLCIDQLGELADISFGDIHIKPYS 304
>gi|333910248|ref|YP_004483981.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333750837|gb|AEF95916.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 258
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 21/185 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G VT + LK G+++AVV V ++ P P +A PE++L A K ++SPN
Sbjct: 12 GQDGGFVTALTTYCLKEGILDAVVVVGAN---NWKPYPFIATKPEDILKASKSKYSISPN 68
Query: 193 LNTLALVEAAGVKRLLFCGVGCQV----QVDNGTREGL--------DKFLKAASSEPETV 240
N L + GV CQ+ + D + GL D +
Sbjct: 69 -NKLLEYATENYDNVGLVGVPCQILGGNKFDLKMKIGLFCTKNFPYDAIKNIVDGLGIPI 127
Query: 241 LHYEFMQ----DYKVHLKHLDGHIEEVPYFC-LPANDLVDVIAPSCYSCFDYTNALADLV 295
E M + V ++ I++ +P ++ P+C C D++ AD+
Sbjct: 128 DRVEKMDIKKGKFIVKTSEIENLIKKKEMVKEIPIKEIEKFANPACRLCCDFSAEYADIS 187
Query: 296 VGYMG 300
VG +G
Sbjct: 188 VGSVG 192
>gi|154150019|ref|YP_001403637.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153998571|gb|ABS54994.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 308
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 43/231 (18%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVV--------------CV 158
LG ++ + AR T + ++ AQ GIVT++ L TG+++ + C+
Sbjct: 5 LGKYKSCVSARSTDKEVLKYAQDGGIVTSLFGYALDTGIIDGAIVAANKEFYAKYPSKCI 64
Query: 159 QS----DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 213
Q D + P P + T E+LAA G K +SPN+ L + G+ ++ G
Sbjct: 65 QDSSNLDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNIALLKEATRSFGLDKIGIVGTP 124
Query: 214 CQVQV------------DNGTREGLDKFLKAASSEP----------ETVLHYEFMQDYKV 251
CQ+Q D G L + + P + E ++ ++
Sbjct: 125 CQMQAVRKAQLYPVGMRDVGASIALAVGIFCMENFPYQSILQLVEDHAAMKLESVKKMEI 184
Query: 252 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+ + LP P C+ C DY L D+ G +G P
Sbjct: 185 GKGKFWVYGKRGQVVQLPLKVTHKYEQPGCHVCLDYVANLGDISTGSVGSP 235
>gi|325958619|ref|YP_004290085.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanobacterium sp. AL-21]
gi|325330051|gb|ADZ09113.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanobacterium sp. AL-21]
Length = 426
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 31/220 (14%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
DT++G Y+ + G++T I I L+ G+++ + + + L P P
Sbjct: 89 DTFIG------YSTNMHIRYNSSSGGMITQILISSLELGIIDGALVTRMKKGNPLIPEPF 142
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV-------QVDNGTRE 224
+A+T EE++ A K P + L + +K++ G+ C + +++N R+
Sbjct: 143 IAKTKEEIIEASKSKYCPVPLNSALNELMTTKLKKIAVVGLPCHIHGIRKAEKINNKLRK 202
Query: 225 -----------------GLDKFLKAASSEPETVLHYEFM-QDYKVHLKHLDGHIEEVPYF 266
G LK S E + + E+ + + +K +D E +
Sbjct: 203 KIIIHLGIFCIYTPTFNGTKLLLKKLSLNEEKIKNIEYRGKGWPGSMKIIDHKHEIIVNE 262
Query: 267 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 306
L I C C D TN LAD+ G +P+Y+
Sbjct: 263 YWKFIGLNFFIPFRCLKCCDGTNELADISFGDAWLPEYSN 302
>gi|150401466|ref|YP_001325232.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
aeolicus Nankai-3]
gi|150014169|gb|ABR56620.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus aeolicus Nankai-3]
Length = 282
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 86/239 (35%), Gaps = 81/239 (33%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GIVT + L+ +++ V + R P+ +A T EE+L A G K T PNL+ L
Sbjct: 28 GIVTAAFVYGLENNLLDGAVVASVGEEFRAVPK--VATTVEEILEAAGTKYTTCPNLSVL 85
Query: 197 -ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH 255
+ G +++ G CQ+ TR+ L Y V +H
Sbjct: 86 KQAIREYGCEKVGVVGTPCQII---ATRKSL---------------------KYPVGFRH 121
Query: 256 LDGHIE-EVPYFCL---PANDLVDVIAP-------------------------------- 279
++ I V FC+ P N + ++
Sbjct: 122 MNDKIALTVGIFCMENFPYNGMKTIVEEHCGVKMDDVAKLDIGKGKFWTYTKWGETKSIK 181
Query: 280 ----------SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
+C+ C DYT LAD+ G +G P G S + R E+G+E L+
Sbjct: 182 LADTHPYEQIACHVCTDYTAELADISTGSVGSPD--GWST------VFARTEKGEEFLN 232
>gi|147920172|ref|YP_686063.1| putative coenzyme F420 hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
gi|110621459|emb|CAJ36737.1| putative coenzyme F420 hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
Length = 332
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 83/227 (36%), Gaps = 29/227 (12%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNT 195
G+VT + I L G++ V + D+ L P P +ART EE++ A K P N+
Sbjct: 15 GLVTQLLICALNNGLITGAVVTRMSKDNPLVPEPFIARTQEEIIEASCSKYCPVPVNMAL 74
Query: 196 LALVEAAGVKRLLFCGVGCQVQ-VDNGTREGLDK---------------------FLKAA 233
LV+ + + G+ C + + +GL K L+
Sbjct: 75 KELVKTGSKETIAVVGLPCHIHGLQKAKYKGLFKCNLIFFGIFCGHTPSFNATQWLLRQN 134
Query: 234 SSEPETVLHYEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVD-VIAPSCYSCFDYTN 289
V E+ + + +DG + Y + P C C+D T
Sbjct: 135 GINVADVKQIEYRGKGWPGSMTVTCMDGSKVSLDYHMYWDSGFGKYFFPPRCTLCYDGTA 194
Query: 290 ALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 336
AD+ G +P++ + I R G +LS K ++E+
Sbjct: 195 EFADISFGDAWLPRFKNDRIGT--SVIISRTSVGDRLLSQCKGIIEL 239
>gi|432332065|ref|YP_007250208.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
gi|432138774|gb|AGB03701.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
Length = 308
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 57/238 (23%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS------------ 160
LG ++ ++ AR T + ++ AQ GIVT++ L+ G+++ + S
Sbjct: 5 LGKYKSVVSARSTDKELLKHAQDGGIVTSLFAYALEEGIIDGAIVAASKEFAAKNPSKVM 64
Query: 161 ------DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 213
D + P P + T E+LAA G K +SPN+ L A G+ ++ G
Sbjct: 65 LDNSNFDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNVALLKEATRAFGLDKIGIVGTP 124
Query: 214 CQVQV------------DNGTREGLDKFLKAASSEP-ETVLHYEFMQDYKV----HLKHL 256
CQ+Q D G L + + P +++L + ++D+ +K +
Sbjct: 125 CQMQAVRKAQLYPIGFRDVGASIALAVGIFCMENFPYQSIL--QLVEDHAAMKLESVKKM 182
Query: 257 D------------GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 302
+ G + ++P + P C+ C DY L D+ G +G P
Sbjct: 183 EIGKGKFWVYGKRGQVVQLPLKVTHKYE-----QPGCHVCLDYVANLGDISTGSVGSP 235
>gi|423119235|ref|ZP_17106919.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
gi|376399166|gb|EHT11786.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
Length = 521
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 72/191 (37%), Gaps = 28/191 (14%)
Query: 252 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 311
++ LDG E Y+ L SC++C D AL + V + K+T I
Sbjct: 111 QIRDLDGDFEFETYYSL-----------SCHNCPDVVQALNLMAVLNPRI-KHTAIDGGT 158
Query: 312 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 361
IT RN G+E L EI + +G + E K D D +
Sbjct: 159 FQNEITDRNVMGVPAVFMNGQEFGQGRMTLAEIVAKVDTGAEKRAAEELSKRDAYDVLIV 218
Query: 362 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 418
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 419 HMPSYAKKIVE 429
H+ YA +++
Sbjct: 276 HVSDYAVDVID 286
>gi|147677827|ref|YP_001212042.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
gi|146273924|dbj|BAF59673.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
Length = 404
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+C A I LE + GR R ++ D LG + E L A
Sbjct: 50 CANCGICP-----------AVCPGAEVNIPVLEKFIFGRERPEEIPD---LGFYREALLA 95
Query: 125 RKTK-PVE--GAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
PV GA G+VT++ + L+ G+++ + DD LA + E++LA
Sbjct: 96 WSADLPVRKRGAS-GGLVTSVLVYALEEGIIDCALVAGFRRDDPCRTGAWLAASKEDILA 154
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
A K P L+ A G +R+ G+ CQ+
Sbjct: 155 AAQSKYACVPVNTLLSRALAQGYRRIAAVGLPCQIH 190
>gi|327401003|ref|YP_004341842.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327316511|gb|AEA47127.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus veneficus SNP6]
Length = 405
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 46/214 (21%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+G + ++L A+ T+ A +G T++ I ++ +++ + V +P +A
Sbjct: 209 IGPYRQILSAKSTRIDAVAAGSGAATSLLIYAMEAELIDCAIVV--------GKKPFIAT 260
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAAS 234
P E+ A G+K ++P L L G +++ GV C V K K
Sbjct: 261 KPHELTKAAGIKFAVAPTLALLKDAVKRGFRKIAVVGVPCHVTAAR-------KMQKLGC 313
Query: 235 SEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADL 294
E + + FC P + + A +C C D T AD+
Sbjct: 314 DEIKLIFG----------------------VFC-PRGNHPEKDAVACRECEDLTAEHADV 350
Query: 295 VVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 328
G G PK + I VR E G++++S
Sbjct: 351 SFGNTGSPKGW--------RTIIVRTEIGEKIVS 376
>gi|410720758|ref|ZP_11360111.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410600469|gb|EKQ54997.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 370
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 208 LFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 267
LFC ++N + L +FLK E + + ++V HL +++ F
Sbjct: 42 LFC-------MENFSHTYLKEFLKQNDIEMDDI------DQFRVEKGHLWTYLKNGDVFK 88
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV-PKYTGISMTQHPQYITVRNERGKEM 326
+P + + +C C DYT+ LADL VG +G P ++ I +R E+G +
Sbjct: 89 VPLSQAKICMRKNCQVCMDYTSELADLSVGSVGSDPGWST---------IIIRTEKGLKA 139
Query: 327 LSLVKN--LLEITPTISSG 343
LS +N +E P G
Sbjct: 140 LSKAENEGYIETKPITQQG 158
>gi|327400433|ref|YP_004341272.1| coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
gi|327315941|gb|AEA46557.1| Coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
Length = 331
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + E+ A+ + Q G+VT I ++ G++EA V+ D+ P +A+
Sbjct: 86 LGEYIEIFAAKSNRF--SGQDGGMVTEILASAMEMGIIEAAAVVRR--DEEWKPAAFVAK 141
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAAS 234
+ EE++ A G K + + + L + AG G C V +G R+ F K +
Sbjct: 142 SVEELVQASGTKYSYA---DVLPALRKAGKVSAAIVGTPCMV---SGARKLQQNFAKYRN 195
Query: 235 SEPETV-------LHYE----FMQDYKVHLKHLD------GHIEEVPY-FCLPANDLVDV 276
+ V +YE F++ + + ++ G P P ++ ++
Sbjct: 196 NIRLVVGLFCTENFYYEDLRRFLESKGIDISRVEKMDIKKGKFIVSPQGVSFPVKEMDEI 255
Query: 277 IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 332
+ C C D+ +D+ +G +G G S + VR+E K+++ ++
Sbjct: 256 VPSGCKVCQDFAAVESDVSIGSVGASD--GFSA------VIVRSEVAKQIVDYIRE 303
>gi|395645227|ref|ZP_10433087.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395441967|gb|EJG06724.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 439
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNT 195
GI+T I I L+ G+++ + + + + L P P +A+T EE+L A G K P N+
Sbjct: 108 GIITEILIYALEEGLIDGALVTRMNCNKPLEPEPFIAKTREEILEAAGSKYCPVPTNVAI 167
Query: 196 LALVEAAGVKRLLFCGVGCQVQVDNGTR--EGLDKFLK 231
++E G + G+ C +Q G R E ++K L+
Sbjct: 168 KYILENEG--KYAVVGLPCHIQ---GIRKAEAMNKKLQ 200
>gi|91774180|ref|YP_566872.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanococcoides burtonii DSM 6242]
gi|91713195|gb|ABE53122.1| Coenzyme F420 hydrogenase subunit beta [Methanococcoides burtonii
DSM 6242]
Length = 389
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 65 CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
C+ CG C Y+ V + +G + V + + R + ++ +G
Sbjct: 75 CTLCGACVASCEYVTFVDNKPKLVGKCTAC-----GVCYNQCPRTITKEEDLIGKIRYAY 129
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR P Q G+VT++ L G+++ V + D+ PV+ RT EVL +
Sbjct: 130 AARSAIPGVKGQDGGVVTSMLAYALDEGLLDCAVVTKRSKDEPWKAEPVIVRTSAEVLES 189
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQV 216
G T S L L G+ + F G C +
Sbjct: 190 AGSIYTHSMTLEPLMSAIKQGMGSIGFVGPSCNI 223
>gi|172038265|ref|YP_001804766.1| hypothetical protein cce_3352 [Cyanothece sp. ATCC 51142]
gi|354554384|ref|ZP_08973689.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
gi|171699719|gb|ACB52700.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554063|gb|EHC23454.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
Length = 470
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ + I +L+TG ++ V ++ DD P++A T EE+L A ++P L L
Sbjct: 110 GVISRVLIHLLETGEIDGAVVLRQGLDDPEKATPIIATTAEEILEAAQSVYAVTPMLTIL 169
Query: 197 ALVEAAGVKRLLFCGVGCQVQV 218
+E L F G+ Q+ V
Sbjct: 170 PEIEEFE-GNLAFVGLPEQISV 190
>gi|421726096|ref|ZP_16165273.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
gi|410373063|gb|EKP27767.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
Length = 521
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 234 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 293
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 294 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 345
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 346 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 403
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 404 YLHVNRAWGKKRA---DKHMPSYAKKIVE 429
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|375259622|ref|YP_005018792.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|397656690|ref|YP_006497392.1| alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402839691|ref|ZP_10888175.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
gi|423101878|ref|ZP_17089580.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|365909100|gb|AEX04553.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|376390704|gb|EHT03387.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|394345246|gb|AFN31367.1| Alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402287617|gb|EJU36056.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
Length = 521
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 234 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 293
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 294 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 345
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 346 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 403
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 404 YLHVNRAWGKKRA---DKHMPSYAKKIVE 429
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|423128049|ref|ZP_17115728.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
gi|376395088|gb|EHT07738.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
Length = 521
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 252 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 311
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 312 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK--ADDNAKM 361
+ IT RN GKE L EI + +G + E K A D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKREAYDVLIV 218
Query: 362 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 418
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 419 HMPSYAKKIVE 429
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|423107294|ref|ZP_17094989.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|423113172|ref|ZP_17100863.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
gi|376389420|gb|EHT02112.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|376389714|gb|EHT02404.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
Length = 521
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 252 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 311
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 312 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 361
+ IT RN GKE L EI + +G + E K + D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKRESYDVLIV 218
Query: 362 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 418
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 419 HMPSYAKKIVE 429
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|148642195|ref|YP_001272708.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
gi|148551212|gb|ABQ86340.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
Length = 359
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 204 VKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 262
VK LFC ++N + + L ++LK+ E V + + + +L +DG++
Sbjct: 35 VKIGLFC-------MENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-- 83
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 322
F +P + +C+ C DYT+ ++D+ VG +G PKY + VR+++
Sbjct: 84 ---FKIPIAETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQK 132
Query: 323 GKEML 327
GK+++
Sbjct: 133 GKQII 137
>gi|261350833|ref|ZP_05976250.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
gi|288860451|gb|EFC92749.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
Length = 359
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 204 VKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 262
VK LFC ++N + + L ++LK+ E V + + + +L +DG++
Sbjct: 35 VKIGLFC-------MENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-- 83
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 322
F +P + +C+ C DYT+ ++D+ VG +G PKY + VR+++
Sbjct: 84 ---FRIPIAETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQK 132
Query: 323 GKEML 327
GK+++
Sbjct: 133 GKQII 137
>gi|222444627|ref|ZP_03607142.1| hypothetical protein METSMIALI_00239 [Methanobrevibacter smithii
DSM 2375]
gi|222434192|gb|EEE41357.1| 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2375]
Length = 359
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 204 VKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 262
VK LFC ++N + + L ++LK+ E V + + + +L +DG++
Sbjct: 35 VKIGLFC-------MENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-- 83
Query: 263 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 322
F +P + +C+ C DYT+ ++D+ VG +G PKY + VR+++
Sbjct: 84 ---FKIPIAETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQK 132
Query: 323 GKEML 327
GK+++
Sbjct: 133 GKQII 137
>gi|52549204|gb|AAU83053.1| uncharacterized anaerobic dehydrogenase [uncultured archaeon
GZfos26D6]
Length = 396
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 110/287 (38%), Gaps = 50/287 (17%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
D LGV+ +++ K G Q G+VT + I ++ + +A + VQ + V
Sbjct: 134 DEELGVYNDIIAG---KAATGGQDGGMVTALLISGIENNLFDAALVVQRAAG--YNAEYV 188
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLK 231
+ +L A+G K P ++ L AG +R+ G C+V+ ++ D +
Sbjct: 189 VGDDVAGILRARGTKYLRVPMMSKLEAALKAGKRRIAVVGTPCEVRAVRKLQQLWDLERE 248
Query: 232 AASSEPETVLHYEFMQ-DY---KVHLKHLDG---------HIEEVPY--------FCLPA 270
E + + F DY K + K G I + Y +
Sbjct: 249 YPGVELTILGLFCFESFDYLALKAYTKRTFGVELDKAEKTQISKGKYTVTAEGKDYSCDV 308
Query: 271 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 330
++ I C C D+ + LAD+ +G +G P G S + VR++ GK++L
Sbjct: 309 REMESEIREGCSFCDDFASRLADIAIGSVGSPD--GYST------VIVRSKAGKKLL--- 357
Query: 331 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 377
D F V + AK+ + + A K +G ++
Sbjct: 358 -------------DATEFTRAEVDKKEIAKLVKFKKRNAAKNIGTIL 391
>gi|224368475|ref|YP_002602638.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
gi|223691191|gb|ACN14474.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
Length = 371
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 46/215 (21%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK---------- 186
G++T + + +TG + V ++ R P LA + EE+L A G
Sbjct: 105 GVITALLAHLFETGKINGAVVSRNMETGR---TPWLATSKEEILDAAGSHFNLSQGMETF 161
Query: 187 ----PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQVDNGTR------------------E 224
T SP++ L + G++R+ F G CQ+ +
Sbjct: 162 GERYSTFSPSIKALGEIRREGLERIAFVGTPCQINTIRRMQALGVVPADSIVLCLGLFCS 221
Query: 225 GLDKFLKAASSEPETVLHYEFMQDYKVHLKH------LDGHIEEVPYFCLPANDLVDVIA 278
G K E+ +++ K+++K G I E+P ++L +
Sbjct: 222 GNFTLTKENFHALESKYQFDYHDIEKINIKENFILRLATGEIREIPI-----SELDPLKR 276
Query: 279 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 313
+C C D++ AD+ G +G +T+ P
Sbjct: 277 TACRYCKDFSAEFADISFGGIGADDGYTTVITRTP 311
>gi|401887672|gb|EJT51651.1| ATP dependent DNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 765
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 69 GLCDT------YYIA--HVKDACAFLGDGMSRIEGLETVVHG---RGRRKDSLDDTYLGV 117
G+CD Y+A H+ + CA L S IE LE + H R R+D+ D T +
Sbjct: 413 GMCDVCANRAGVYLAAQHLTEDCAPL----SPIEPLEPLEHSSPPRTTRQDNPDCTLAAL 468
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
H+E P G QWTG+ +T TG V S DD L+P
Sbjct: 469 HDE--------PQTGLQWTGVFSTFGT----TGSGIGSTGVSSKVDDDLAP 507
>gi|312137324|ref|YP_004004661.1| coenzyme f420 hydrogenase [Methanothermus fervidus DSM 2088]
gi|311225043|gb|ADP77899.1| Coenzyme F420 hydrogenase [Methanothermus fervidus DSM 2088]
Length = 358
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 111 DDTY--LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y LG + E++ AR P Q G+VT + L +V V+ V DP+ P
Sbjct: 271 EDAYSALGNYIEIISARS--PFFKGQDGGVVTALLACALSEKIVNKVLIVDKDPEKPWKP 328
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTL 196
P+L ++V+ A G K ++ P L
Sbjct: 329 LPILTDKIDDVVKASGTKYSVCPIFKAL 356
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 327
+P + L + SC C D+T+ LAD+ VG +G PK G S + +R+E+G +++
Sbjct: 88 IPLSTLRKSMRKSCKICMDFTSELADISVGSVGSPK--GWST------VIIRSEKGLKLV 139
Query: 328 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 361
K I + DR + + K N +
Sbjct: 140 EKAKKAKYIETKMLDADRLNLIEKLAKIKKNKNL 173
>gi|282164844|ref|YP_003357229.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
gi|282157158|dbj|BAI62246.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
Length = 341
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 268 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 314
LP + L + + P C C D+T+ LAD+ VG +G + + +T+ P+
Sbjct: 257 LPLSSLAEFVKPGCRKCNDFTSKLADISVGSVGSAAGSSVVITRTPE 303
>gi|423286529|ref|ZP_17265380.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
gi|392675216|gb|EIY68658.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
Length = 423
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 112 DTYLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D Y+G +E L Y+ + A G++++I I +L+ ++ + + ++ L P
Sbjct: 83 DKYIGNYERLYTGYSSDMNIRKTANSGGLLSSILIFLLQKRYIDGAIITRYSSENPLQPS 142
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ-------VDNGT 222
+A T EE+L +KG K TL G KR + G+ C +Q +D+
Sbjct: 143 AFIATTSEEILESKGSKYAPVQLSGTLRKALLLG-KRYVIVGLPCHIQSVRKWAKIDSKV 201
Query: 223 REGLDKFLKAASSEPETVLHYEFMQDY---------------KVHLKHLDGHIEEV---- 263
+ + + S +++ Y K LK + + E +
Sbjct: 202 DKVIFAYFSLYCSSERCFYAQDYLCRYFNIEKCNIKEFSFREKGKLKFIGNNGENLLSMR 261
Query: 264 ----PYFCLPANDLVDVIAPS-CYSCFDYTNALADLVVGYMGVPKYT----GIS--MTQH 312
P F + P+ C C D+ LAD+ G +G+ YT GI+ + ++
Sbjct: 262 RGDSPVFHKYYRLVGSHFKPNRCQMCVDHYGYLADMSFGDIGIAPYTQDKIGINSLIVRN 321
Query: 313 PQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 355
P++I + NE K+ +K+L S GD ++ KA
Sbjct: 322 PKFIEILNEAIKDGCIELKSLDPDLLNKSQGDMMFSRLKKAKA 364
>gi|147668790|ref|YP_001213608.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Dehalococcoides sp. BAV1]
gi|146269738|gb|ABQ16730.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Dehalococcoides sp. BAV1]
Length = 428
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K P
Sbjct: 109 GVATALLNYALETGLIDGALVSGANPSSPLTPASFIARTPEELKQAAGSK--YCPVAAAS 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQV 218
A+ E A R G+ C +Q
Sbjct: 167 AISEITAKPGRYAVVGLPCHIQA 189
>gi|383319626|ref|YP_005380467.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
gi|379320996|gb|AFC99948.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
Length = 341
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 24/204 (11%)
Query: 134 QWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNL 193
Q G VT + L+ +V+ V + D D L+ P + E + A G K T + L
Sbjct: 101 QNGGAVTALLKAALQEELVDRAVVMGVDRWD-LNAYPCIIEDAEGLERAAGSKYTTNGIL 159
Query: 194 NTL-ALVEAAGVKRLLFCGVGCQVQVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 252
+ +++ ++ + G C VQ R+ +++ + + + ++ + +
Sbjct: 160 EAMRGIIKDESIRSVALVGTPCTVQAIGLLRKSSNEYAERLAHKVRFLIGLFCFESFDSS 219
Query: 253 LKHLDGHIEEVPYF----------------------CLPANDLVDVIAPSCYSCFDYTNA 290
L VP + LP + L D + P C+ C D+T+
Sbjct: 220 LIPEVARRLSVPSWRIAKMNAGEGKLTVTLRSGEVRALPLSSLTDFVRPGCFKCNDFTSR 279
Query: 291 LADLVVGYMGVPKYTGISMTQHPQ 314
LAD+ VG +G + + + P+
Sbjct: 280 LADVSVGSVGSAHGSSALIVRTPE 303
>gi|452203057|ref|YP_007483190.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
gi|452110116|gb|AGG05848.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
Length = 428
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K P
Sbjct: 109 GVATALLNYALETGLIDGALVSGANPSSPLTPASFIARTPEELKQAAGSK--YCPVAAAS 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQV 218
A+ E A R G+ C +Q
Sbjct: 167 AISEITAKPGRYAVVGLPCHIQA 189
>gi|119887|sp|P06130.1|FDHB_METFO RecName: Full=Formate dehydrogenase subunit beta
gi|149709|gb|AAA72183.1| formate dehydrogenase B (fdhB) [Methanobacterium formicicum]
Length = 399
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 58/252 (23%)
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
++ YA+ + E ++ G VTT+ +LK G+V+AV+ V S D P+L PE
Sbjct: 6 DMFYAKSSDAEIAEAGEYGGAVTTLLKFLLKEGIVDAVLAVDSSA-DLYDVVPILIEDPE 64
Query: 178 EVLAAKG----------------------------VKPTLSPNLNTLALVEAAGVKRLLF 209
+V+ A G VKP + + L E ++
Sbjct: 65 DVVKAAGSLHFGTLNLAKVVTRYLDGAQDMKIAVTVKPCDAMTMVELMKREKVNADNVIM 124
Query: 210 CGVGCQVQVDNGT------REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 263
G+ C GT R+ +++F + +P++V+ E + K+ ++ DG +E+
Sbjct: 125 VGLNC-----GGTMPPVKGRQMMEEFYEV---DPDSVVKEEIAKG-KLIVETEDGTEKEI 175
Query: 264 PYFCLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 320
P ++L D +C C +ADL G GV + +I V +
Sbjct: 176 PI-----DELEDEGFGRRTNCRRCEVNIPRMADLACGNWGVIG----PLAGKATFIEVCS 226
Query: 321 ERGKEMLSLVKN 332
+G E+L K
Sbjct: 227 PKGAEVLEKAKE 238
>gi|296282735|ref|ZP_06860733.1| hypothetical protein CbatJ_03899 [Citromicrobium bathyomarinum
JL354]
Length = 423
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL-AAKGVK--------- 186
G+ T + + +L++G ++A + + L PV+A T EE+L AA+ V
Sbjct: 84 GVTTAVLLHLLQSGRIDAAIVARQGVPAPLEASPVIASTAEEILDAAQSVYIPVAMLDIL 143
Query: 187 PTLSPNLN---TLALVEAAGVKRLLFCGVGCQVQVD------NGTR---EGLDKFLKA-- 232
L P TL +AA ++RL G Q+D GT +D F++A
Sbjct: 144 SRLEPGKRYAITLVPEQAAALRRLQHSGHPQAQQIDYVLGPYTGTALYPAAIDSFVRAHG 203
Query: 233 -ASSEPETVLHY----------------EFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD 275
A S+P T L + + ++ KV+ L +P+F A+
Sbjct: 204 VAKSDPVTSLEWRAGEWPGYLEIKTQSGKVLRSKKVYYNFL------IPFFVTRAS---- 253
Query: 276 VIAPSCYSCFDYTNALADLVVGYMGVPKY 304
D+ N DL VG P +
Sbjct: 254 ------LQSMDFANEFCDLSVGDAWSPAF 276
>gi|410091293|ref|ZP_11287864.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
gi|409761387|gb|EKN46459.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
Length = 408
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 169 RPVLARTPEEVLAAKG-VKPTLSPNLN--TLALVEAAGVKRLLFCGVGCQVQVD------ 219
RPV R +VL +G V+P LSPN N T +++ G+ GC VD
Sbjct: 161 RPV-TRQARQVLMLEGCVQPALSPNTNAATARVLDRLGISVTPISEAGCCGAVDYHLNAQ 219
Query: 220 ----NGTREGLDKFLKAASSEPETVLHY-----EFMQDYKVHLKHLDGHIEEVPYFCLPA 270
+G R +D + A + ++++ F++DY L+H + E+ A
Sbjct: 220 EAGLDGARRNIDAWWPAIEAGAQSIVQTASGCGAFVKDYGHLLRHDPTYAEKAAQVSAKA 279
Query: 271 NDLVDVI 277
DLV+V+
Sbjct: 280 RDLVEVL 286
>gi|288559592|ref|YP_003423078.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter
ruminantium M1]
gi|288542302|gb|ADC46186.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter
ruminantium M1]
Length = 402
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
E ++ G+VTTI +L+ G+V+AVV V+ + D +P+L PE+V+ + G
Sbjct: 20 EKGEYGGVVTTIMKYLLEEGIVDAVVAVE-EAADLYDAKPILITDPEDVIKSAG 72
>gi|223949797|gb|ACN28982.1| unknown [Zea mays]
Length = 89
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 338 PTISSGDRRPFVMETVKADDNAKMG 362
+I+ G R+PFVMETVK DD AK+G
Sbjct: 26 TSIAKGSRQPFVMETVKDDDAAKLG 50
>gi|5931749|emb|CAB56640.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus tindarius]
Length = 342
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 42/251 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+ + +A +L+TG V+ +V + D ++ PE+V G K T
Sbjct: 92 GQDGGVTSILAKALLETGTVDCIVGIARD--GAWGTELIVMTKPEDVDRTTGTKYTYDSV 149
Query: 193 LNTLA-------LVEAAGV------KRLLFCGVGCQVQVDNGTREGLDKFLKAASSEP-- 237
L+ L + GV RLLF ++ V G ++ F +E
Sbjct: 150 LSALREPFEKYDKIGVIGVPCQAHGARLLFENNNDKIVVILGLL-CMESFYHDVMTEKIV 208
Query: 238 --------ETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 288
E V+ +F + + + K + H ++P A + C++C DYT
Sbjct: 209 PEVMGLNLEDVVKMDFGKGKFWNYTKDGEAHSVKIPEVAHYARN-------PCHNCCDYT 261
Query: 289 NALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPF 348
+ AD+ +G +G P + +R + GK+M L+K+ +EI G
Sbjct: 262 SVSADISLGSVGTP--------DGWNCVLIRTDVGKKMFELIKDKVEIMEDPKPGMDLIK 313
Query: 349 VMETVKADDNA 359
+ +K D+N+
Sbjct: 314 KLAKMKHDNNS 324
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,164,994,822
Number of Sequences: 23463169
Number of extensions: 314142720
Number of successful extensions: 1019588
Number of sequences better than 100.0: 392
Number of HSP's better than 100.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 1018255
Number of HSP's gapped (non-prelim): 634
length of query: 444
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 298
effective length of database: 8,933,572,693
effective search space: 2662204662514
effective search space used: 2662204662514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)