Query 013352
Match_columns 444
No_of_seqs 449 out of 2330
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 08:58:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013352.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013352hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 2.1E-84 7.2E-89 650.9 46.2 440 1-441 17-469 (475)
2 1vg0_A RAB proteins geranylger 100.0 3.5E-68 1.2E-72 547.0 44.3 431 1-440 5-610 (650)
3 2bcg_G Secretory pathway GDP d 100.0 4.3E-65 1.5E-69 516.0 44.5 439 1-440 8-452 (453)
4 1d5t_A Guanine nucleotide diss 100.0 5.7E-64 1.9E-68 504.8 45.6 430 1-432 3-433 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 9.9E-30 3.4E-34 260.5 28.2 320 5-359 2-377 (501)
6 3ka7_A Oxidoreductase; structu 100.0 4.2E-26 1.4E-30 228.5 32.4 369 5-427 1-425 (425)
7 3nrn_A Uncharacterized protein 100.0 8.2E-26 2.8E-30 226.3 31.9 364 6-425 2-403 (421)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 4.5E-22 1.5E-26 202.4 34.0 384 3-427 15-471 (478)
9 3nks_A Protoporphyrinogen oxid 99.9 3.8E-22 1.3E-26 202.8 28.3 384 5-428 3-473 (477)
10 3i6d_A Protoporphyrinogen oxid 99.9 3.2E-22 1.1E-26 202.7 26.5 385 1-426 1-465 (470)
11 4gde_A UDP-galactopyranose mut 99.9 9.4E-23 3.2E-27 209.1 19.1 245 4-286 10-273 (513)
12 3lov_A Protoporphyrinogen oxid 99.9 3.6E-21 1.2E-25 195.6 30.6 384 3-427 3-463 (475)
13 1sez_A Protoporphyrinogen oxid 99.9 3.8E-21 1.3E-25 196.9 29.4 394 1-426 10-490 (504)
14 1s3e_A Amine oxidase [flavin-c 99.9 3.2E-21 1.1E-25 198.2 25.4 255 1-286 1-265 (520)
15 2vvm_A Monoamine oxidase N; FA 99.9 4.8E-22 1.6E-26 203.1 16.8 252 4-286 39-309 (495)
16 2yg5_A Putrescine oxidase; oxi 99.8 2.8E-20 9.4E-25 187.8 19.9 250 1-286 1-265 (453)
17 4dsg_A UDP-galactopyranose mut 99.8 1.6E-19 5.6E-24 183.5 25.1 377 3-426 8-452 (484)
18 2b9w_A Putative aminooxidase; 99.8 1E-18 3.4E-23 174.8 16.1 247 2-286 4-255 (424)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.8 8.6E-18 2.9E-22 168.4 17.3 246 5-286 2-256 (431)
20 1rsg_A FMS1 protein; FAD bindi 99.8 6.1E-18 2.1E-22 173.5 15.4 235 3-286 7-254 (516)
21 3hdq_A UDP-galactopyranose mut 99.7 2E-17 6.7E-22 162.6 12.9 345 3-427 28-389 (397)
22 2iid_A L-amino-acid oxidase; f 99.7 2.4E-16 8.2E-21 160.9 20.7 245 3-286 32-295 (498)
23 2jae_A L-amino acid oxidase; o 99.7 1.9E-16 6.5E-21 161.3 19.4 263 2-286 9-293 (489)
24 1v0j_A UDP-galactopyranose mut 99.7 4.1E-18 1.4E-22 169.0 5.7 352 1-426 4-384 (399)
25 2e1m_A L-glutamate oxidase; L- 99.7 3.7E-16 1.3E-20 152.3 18.4 238 3-264 43-349 (376)
26 2bi7_A UDP-galactopyranose mut 99.7 5.9E-17 2E-21 159.7 10.0 344 1-427 1-368 (384)
27 1b37_A Protein (polyamine oxid 99.7 2.3E-16 8E-21 159.9 11.7 242 1-286 1-267 (472)
28 1i8t_A UDP-galactopyranose mut 99.6 1.1E-16 3.8E-21 156.9 6.8 343 4-429 1-367 (367)
29 4gut_A Lysine-specific histone 99.4 1.3E-12 4.4E-17 139.0 16.8 74 4-96 336-411 (776)
30 2xag_A Lysine-specific histone 99.4 2.4E-11 8.3E-16 130.1 20.7 73 3-95 277-351 (852)
31 3dme_A Conserved exported prot 99.4 1.6E-12 5.6E-17 126.6 10.8 46 1-46 1-46 (369)
32 3ayj_A Pro-enzyme of L-phenyla 99.4 8.6E-13 2.9E-17 137.7 9.2 80 4-96 56-162 (721)
33 2z3y_A Lysine-specific histone 99.4 4.4E-11 1.5E-15 125.9 22.2 73 3-95 106-180 (662)
34 3dje_A Fructosyl amine: oxygen 99.3 4.9E-12 1.7E-16 126.7 13.1 62 224-286 149-218 (438)
35 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 3.5E-11 1.2E-15 116.4 15.4 43 5-47 2-47 (342)
36 3kkj_A Amine oxidase, flavin-c 99.3 4.6E-12 1.6E-16 117.3 7.7 62 4-85 2-63 (336)
37 3nyc_A D-arginine dehydrogenas 99.3 8.3E-11 2.8E-15 115.1 15.8 62 224-287 143-207 (381)
38 3ps9_A TRNA 5-methylaminomethy 99.2 1.8E-10 6.2E-15 121.7 17.9 62 224-287 406-471 (676)
39 1y56_B Sarcosine oxidase; dehy 99.2 1.4E-10 4.7E-15 113.8 14.7 56 232-288 149-204 (382)
40 3v76_A Flavoprotein; structura 99.2 3.3E-10 1.1E-14 112.4 16.7 61 224-286 124-184 (417)
41 1yvv_A Amine oxidase, flavin-c 99.2 2E-10 7E-15 110.4 14.7 45 4-48 2-46 (336)
42 1pj5_A N,N-dimethylglycine oxi 99.2 4.6E-10 1.6E-14 121.3 16.9 64 224-288 140-206 (830)
43 4at0_A 3-ketosteroid-delta4-5a 99.1 6.9E-10 2.4E-14 113.3 16.8 54 233-286 203-261 (510)
44 2oln_A NIKD protein; flavoprot 99.1 7.8E-10 2.7E-14 109.1 16.6 62 224-287 142-206 (397)
45 3pvc_A TRNA 5-methylaminomethy 99.1 8E-10 2.7E-14 116.9 16.9 63 223-287 400-467 (689)
46 2gag_B Heterotetrameric sarcos 99.1 1.2E-09 4.1E-14 107.9 16.6 63 224-287 163-228 (405)
47 2gqf_A Hypothetical protein HI 99.1 2.1E-09 7.2E-14 106.2 16.2 44 1-44 1-44 (401)
48 2i0z_A NAD(FAD)-utilizing dehy 99.1 6.5E-10 2.2E-14 111.6 12.6 62 224-286 125-188 (447)
49 2uzz_A N-methyl-L-tryptophan o 99.0 1.7E-09 5.9E-14 105.5 12.9 60 225-286 139-201 (372)
50 3da1_A Glycerol-3-phosphate de 99.0 2.6E-09 8.9E-14 110.1 14.6 56 232-288 170-231 (561)
51 1y0p_A Fumarate reductase flav 99.0 1.3E-08 4.5E-13 105.3 19.3 55 232-286 255-314 (571)
52 1qo8_A Flavocytochrome C3 fuma 99.0 1.1E-08 3.9E-13 105.6 17.9 60 225-285 240-308 (566)
53 1ryi_A Glycine oxidase; flavop 99.0 1.7E-09 5.6E-14 106.0 10.6 62 224-287 153-217 (382)
54 2gf3_A MSOX, monomeric sarcosi 99.0 8E-09 2.7E-13 101.3 14.9 55 232-288 150-204 (389)
55 3axb_A Putative oxidoreductase 99.0 7.8E-09 2.7E-13 103.6 14.8 56 232-287 181-252 (448)
56 3cgv_A Geranylgeranyl reductas 98.9 3.2E-09 1.1E-13 104.4 11.7 40 3-42 3-42 (397)
57 3nix_A Flavoprotein/dehydrogen 98.9 6.9E-09 2.3E-13 103.0 13.3 40 1-40 1-41 (421)
58 2rgh_A Alpha-glycerophosphate 98.9 8.7E-09 3E-13 106.5 12.6 56 232-288 188-249 (571)
59 3nlc_A Uncharacterized protein 98.9 2.5E-09 8.6E-14 109.2 7.8 57 232-289 220-277 (549)
60 3i3l_A Alkylhalidase CMLS; fla 98.8 5.8E-08 2E-12 100.5 15.9 56 232-288 128-187 (591)
61 2wdq_A Succinate dehydrogenase 98.8 5.3E-08 1.8E-12 100.9 15.3 53 232-284 143-201 (588)
62 1d4d_A Flavocytochrome C fumar 98.8 2.2E-07 7.4E-12 96.1 18.9 54 232-286 255-314 (572)
63 3oz2_A Digeranylgeranylglycero 98.7 3.1E-09 1.1E-13 104.2 3.6 40 3-42 3-42 (397)
64 2h88_A Succinate dehydrogenase 98.7 6.5E-08 2.2E-12 100.5 13.5 52 232-284 155-212 (621)
65 2bs2_A Quinol-fumarate reducta 98.7 1.9E-07 6.4E-12 97.7 16.2 52 232-284 158-215 (660)
66 3lxd_A FAD-dependent pyridine 98.7 5.6E-08 1.9E-12 96.4 9.7 59 231-290 193-252 (415)
67 3ihg_A RDME; flavoenzyme, anth 98.7 1E-07 3.5E-12 97.8 11.6 40 1-40 1-41 (535)
68 3fpz_A Thiazole biosynthetic e 98.6 1.2E-08 4E-13 97.9 3.8 43 3-45 64-108 (326)
69 4gcm_A TRXR, thioredoxin reduc 98.6 1.5E-08 5.2E-13 96.4 4.5 44 1-45 2-46 (312)
70 2qa2_A CABE, polyketide oxygen 98.6 3.5E-07 1.2E-11 92.9 14.0 38 3-40 11-48 (499)
71 4fk1_A Putative thioredoxin re 98.6 2E-08 6.9E-13 95.2 4.3 41 2-43 4-44 (304)
72 4a5l_A Thioredoxin reductase; 98.6 2.4E-08 8.1E-13 94.9 4.2 38 1-38 1-38 (314)
73 3fg2_P Putative rubredoxin red 98.5 6.4E-07 2.2E-11 88.4 13.0 58 231-289 183-241 (404)
74 3l8k_A Dihydrolipoyl dehydroge 98.5 3.3E-08 1.1E-12 99.6 3.5 45 1-45 1-45 (466)
75 1c0p_A D-amino acid oxidase; a 98.5 7.7E-08 2.6E-12 93.5 5.2 41 1-41 3-43 (363)
76 3urh_A Dihydrolipoyl dehydroge 98.5 5.5E-08 1.9E-12 98.7 4.2 45 2-46 23-67 (491)
77 3ab1_A Ferredoxin--NADP reduct 98.5 5.8E-08 2E-12 94.3 3.9 45 1-45 11-55 (360)
78 3oc4_A Oxidoreductase, pyridin 98.5 5.3E-07 1.8E-11 90.4 10.8 56 232-289 189-244 (452)
79 3t37_A Probable dehydrogenase; 98.5 4E-07 1.4E-11 93.1 10.1 36 3-38 16-52 (526)
80 2zbw_A Thioredoxin reductase; 98.5 7E-08 2.4E-12 92.6 4.0 45 1-45 2-46 (335)
81 3iwa_A FAD-dependent pyridine 98.5 1.4E-06 4.9E-11 87.7 13.8 58 231-289 201-258 (472)
82 3c96_A Flavin-containing monoo 98.4 9.6E-08 3.3E-12 94.5 4.6 41 1-41 1-42 (410)
83 4a9w_A Monooxygenase; baeyer-v 98.4 1.2E-07 4.1E-12 91.4 4.2 43 3-45 2-44 (357)
84 3cty_A Thioredoxin reductase; 98.4 1.4E-07 5E-12 89.7 4.5 44 1-45 13-56 (319)
85 4dna_A Probable glutathione re 98.4 1.3E-07 4.5E-12 95.1 3.9 44 1-45 1-45 (463)
86 3o0h_A Glutathione reductase; 98.4 1.3E-07 4.6E-12 95.6 3.8 55 232-288 232-287 (484)
87 1v59_A Dihydrolipoamide dehydr 98.4 1.1E-07 3.8E-12 96.1 2.7 45 1-45 2-46 (478)
88 2gv8_A Monooxygenase; FMO, FAD 98.4 2.5E-07 8.6E-12 92.6 5.3 44 2-45 4-49 (447)
89 1rp0_A ARA6, thiazole biosynth 98.4 2.1E-07 7.3E-12 87.3 4.4 41 3-43 38-79 (284)
90 2xdo_A TETX2 protein; tetracyc 98.4 2.8E-07 9.4E-12 90.8 5.3 40 2-41 24-63 (398)
91 1ojt_A Surface protein; redox- 98.4 1.4E-07 4.7E-12 95.5 3.2 45 1-45 3-47 (482)
92 3f8d_A Thioredoxin reductase ( 98.4 2.3E-07 7.8E-12 88.1 4.5 40 4-45 15-54 (323)
93 2q7v_A Thioredoxin reductase; 98.4 2.2E-07 7.4E-12 88.8 4.3 43 2-45 6-48 (325)
94 1mo9_A ORF3; nucleotide bindin 98.3 2.7E-07 9.3E-12 94.3 5.1 45 1-45 40-84 (523)
95 3itj_A Thioredoxin reductase 1 98.3 1.9E-07 6.4E-12 89.4 3.6 44 3-46 21-68 (338)
96 3lzw_A Ferredoxin--NADP reduct 98.3 1.7E-07 5.7E-12 89.5 3.1 42 4-45 7-48 (332)
97 2qcu_A Aerobic glycerol-3-phos 98.3 2.8E-07 9.7E-12 93.7 4.9 55 232-288 149-209 (501)
98 3rp8_A Flavoprotein monooxygen 98.3 2.7E-07 9.2E-12 91.1 4.6 38 3-40 22-59 (407)
99 3atr_A Conserved archaeal prot 98.3 1.8E-07 6.1E-12 93.9 3.1 38 2-39 4-41 (453)
100 1zk7_A HGII, reductase, mercur 98.3 2.8E-07 9.7E-12 92.8 4.5 44 1-45 1-44 (467)
101 3ef6_A Toluene 1,2-dioxygenase 98.3 1.5E-06 5.3E-11 85.8 9.6 56 232-289 185-241 (410)
102 2r9z_A Glutathione amide reduc 98.3 2.6E-07 8.7E-12 93.0 4.0 44 1-45 1-44 (463)
103 3jsk_A Cypbp37 protein; octame 98.3 2.9E-07 1E-11 87.9 4.2 40 4-43 79-120 (344)
104 3qfa_A Thioredoxin reductase 1 98.3 3.1E-07 1.1E-11 93.7 4.4 45 2-46 30-82 (519)
105 1ges_A Glutathione reductase; 98.3 2.7E-07 9.3E-12 92.5 3.8 43 1-44 1-43 (450)
106 3lad_A Dihydrolipoamide dehydr 98.3 4.3E-07 1.5E-11 91.7 4.4 41 3-43 2-48 (476)
107 3ic9_A Dihydrolipoamide dehydr 98.3 3.5E-07 1.2E-11 92.8 3.6 40 4-44 8-47 (492)
108 3alj_A 2-methyl-3-hydroxypyrid 98.3 5.5E-07 1.9E-11 88.0 4.9 38 4-41 11-48 (379)
109 2qae_A Lipoamide, dihydrolipoy 98.2 4.3E-07 1.5E-11 91.5 4.0 42 4-45 2-43 (468)
110 3dk9_A Grase, GR, glutathione 98.2 3.8E-07 1.3E-11 92.2 3.5 42 3-45 19-60 (478)
111 2cul_A Glucose-inhibited divis 98.2 5.5E-07 1.9E-11 81.8 4.3 35 3-37 2-36 (232)
112 2hqm_A GR, grase, glutathione 98.2 4.1E-07 1.4E-11 91.9 3.6 58 232-289 226-285 (479)
113 1chu_A Protein (L-aspartate ox 98.2 5.9E-07 2E-11 92.1 4.7 39 4-43 8-46 (540)
114 2qa1_A PGAE, polyketide oxygen 98.2 7.3E-07 2.5E-11 90.6 5.3 41 1-41 8-48 (500)
115 1trb_A Thioredoxin reductase; 98.2 4.1E-07 1.4E-11 86.5 3.3 44 1-45 2-45 (320)
116 1w4x_A Phenylacetone monooxyge 98.2 5.5E-07 1.9E-11 92.4 4.4 42 3-44 15-56 (542)
117 1dxl_A Dihydrolipoamide dehydr 98.2 5.8E-07 2E-11 90.5 4.4 44 2-45 4-47 (470)
118 3pl8_A Pyranose 2-oxidase; sub 98.2 6.1E-07 2.1E-11 93.5 4.6 43 1-43 43-85 (623)
119 3d1c_A Flavin-containing putat 98.2 4.6E-07 1.6E-11 88.0 3.4 43 3-46 3-46 (369)
120 2gjc_A Thiazole biosynthetic e 98.2 5.8E-07 2E-11 85.4 3.9 41 3-43 64-106 (326)
121 2wpf_A Trypanothione reductase 98.2 4E-07 1.4E-11 92.4 3.0 57 232-289 235-292 (495)
122 3c4n_A Uncharacterized protein 98.2 5.8E-07 2E-11 88.8 3.9 55 232-288 172-235 (405)
123 3r9u_A Thioredoxin reductase; 98.2 5.3E-07 1.8E-11 85.3 3.4 42 3-45 3-45 (315)
124 2vou_A 2,6-dihydroxypyridine h 98.2 9.9E-07 3.4E-11 86.8 5.4 37 3-39 4-40 (397)
125 3dgz_A Thioredoxin reductase 2 98.2 6.8E-07 2.3E-11 90.6 4.2 44 3-46 5-56 (488)
126 2yqu_A 2-oxoglutarate dehydrog 98.2 6.4E-07 2.2E-11 89.9 3.9 42 4-45 1-42 (455)
127 2gmh_A Electron transfer flavo 98.2 6.3E-07 2.2E-11 92.8 3.7 56 232-287 144-215 (584)
128 1zmd_A Dihydrolipoyl dehydroge 98.2 6.8E-07 2.3E-11 90.2 3.8 43 3-45 5-47 (474)
129 4ap3_A Steroid monooxygenase; 98.2 8.4E-07 2.9E-11 91.0 4.0 44 3-46 20-63 (549)
130 2a87_A TRXR, TR, thioredoxin r 98.2 7.9E-07 2.7E-11 85.3 3.6 43 2-45 12-54 (335)
131 2x3n_A Probable FAD-dependent 98.2 9.1E-07 3.1E-11 87.0 4.1 55 232-287 107-164 (399)
132 2vdc_G Glutamate synthase [NAD 98.2 8.6E-07 2.9E-11 88.8 3.9 42 3-44 121-162 (456)
133 3e1t_A Halogenase; flavoprotei 98.2 9.8E-07 3.3E-11 89.9 4.3 55 232-287 111-170 (512)
134 3k30_A Histamine dehydrogenase 98.1 9.1E-07 3.1E-11 93.5 4.0 43 3-45 390-432 (690)
135 3fbs_A Oxidoreductase; structu 98.1 1.1E-06 3.8E-11 82.3 4.2 38 4-41 2-39 (297)
136 3uox_A Otemo; baeyer-villiger 98.1 1.1E-06 3.9E-11 90.0 4.4 42 3-44 8-49 (545)
137 2a8x_A Dihydrolipoyl dehydroge 98.1 8.9E-07 3E-11 89.1 3.4 42 3-45 2-43 (464)
138 1vdc_A NTR, NADPH dependent th 98.1 7.1E-07 2.4E-11 85.4 2.5 43 3-45 7-53 (333)
139 3gwf_A Cyclohexanone monooxyge 98.1 1.1E-06 3.7E-11 90.0 4.0 43 4-46 8-51 (540)
140 2bry_A NEDD9 interacting prote 98.1 1.6E-06 5.3E-11 88.0 5.2 40 3-42 91-130 (497)
141 3g3e_A D-amino-acid oxidase; F 98.1 9.2E-07 3.1E-11 85.4 3.0 36 6-41 2-43 (351)
142 1k0i_A P-hydroxybenzoate hydro 98.1 1.2E-06 4.2E-11 85.9 3.9 35 4-38 2-36 (394)
143 3dgh_A TRXR-1, thioredoxin red 98.1 1.4E-06 4.8E-11 88.1 4.4 44 3-46 8-60 (483)
144 2aqj_A Tryptophan halogenase, 98.1 1.7E-06 5.9E-11 88.7 5.0 54 232-286 165-219 (538)
145 2eq6_A Pyruvate dehydrogenase 98.1 1.1E-06 3.6E-11 88.5 3.4 40 4-44 6-45 (464)
146 3fmw_A Oxygenase; mithramycin, 98.1 1.6E-06 5.4E-11 89.4 4.7 37 4-40 49-85 (570)
147 2q0l_A TRXR, thioredoxin reduc 98.1 1.7E-06 5.7E-11 81.9 4.3 40 5-45 2-42 (311)
148 1fec_A Trypanothione reductase 98.1 1.3E-06 4.5E-11 88.5 3.8 57 232-289 231-288 (490)
149 2r0c_A REBC; flavin adenine di 98.1 1.6E-06 5.5E-11 89.1 4.4 38 4-41 26-63 (549)
150 2xve_A Flavin-containing monoo 98.1 1.8E-06 6E-11 86.9 4.6 41 5-45 3-49 (464)
151 1ebd_A E3BD, dihydrolipoamide 98.1 1.6E-06 5.5E-11 86.9 3.9 41 3-44 2-42 (455)
152 2dkh_A 3-hydroxybenzoate hydro 98.1 2.2E-06 7.6E-11 89.7 4.8 38 3-40 31-69 (639)
153 1xdi_A RV3303C-LPDA; reductase 98.1 1.3E-06 4.4E-11 88.8 2.9 55 233-289 224-279 (499)
154 4hb9_A Similarities with proba 98.1 2.1E-06 7.3E-11 84.3 4.4 34 6-39 3-36 (412)
155 3cp8_A TRNA uridine 5-carboxym 98.1 1.9E-06 6.5E-11 88.9 4.0 39 3-41 20-59 (641)
156 1onf_A GR, grase, glutathione 98.0 2.1E-06 7.1E-11 87.2 4.2 57 232-289 217-275 (500)
157 1lvl_A Dihydrolipoamide dehydr 98.0 1.5E-06 5.2E-11 87.2 3.1 42 3-45 4-45 (458)
158 2zxi_A TRNA uridine 5-carboxym 98.0 2.4E-06 8.3E-11 87.9 4.3 52 233-286 124-177 (637)
159 1ju2_A HydroxynitrIle lyase; f 98.0 1.7E-06 5.7E-11 88.6 3.1 38 3-41 25-62 (536)
160 4b1b_A TRXR, thioredoxin reduc 98.0 2.3E-06 8E-11 87.4 3.9 56 232-289 263-319 (542)
161 3ihm_A Styrene monooxygenase A 98.0 2.3E-06 7.9E-11 85.2 3.6 34 4-37 22-55 (430)
162 3q9t_A Choline dehydrogenase a 98.0 3.2E-06 1.1E-10 87.0 4.7 36 3-38 5-41 (577)
163 3ces_A MNMG, tRNA uridine 5-ca 98.0 2.8E-06 9.5E-11 87.7 4.1 52 233-286 125-178 (651)
164 1o94_A Tmadh, trimethylamine d 98.0 3.3E-06 1.1E-10 89.7 4.6 42 4-45 389-430 (729)
165 2e4g_A Tryptophan halogenase; 98.0 3.9E-06 1.3E-10 86.3 4.9 55 232-287 194-250 (550)
166 1fl2_A Alkyl hydroperoxide red 98.0 3.7E-06 1.3E-10 79.4 4.3 39 4-44 1-39 (310)
167 3c4a_A Probable tryptophan hyd 98.0 3.3E-06 1.1E-10 82.6 4.1 34 6-39 2-37 (381)
168 2e5v_A L-aspartate oxidase; ar 98.0 4E-06 1.4E-10 84.4 4.6 51 232-284 119-171 (472)
169 1kf6_A Fumarate reductase flav 98.0 3.2E-06 1.1E-10 87.7 3.8 53 232-285 134-193 (602)
170 3g5s_A Methylenetetrahydrofola 98.0 5.2E-06 1.8E-10 80.0 4.9 39 5-43 2-40 (443)
171 2ywl_A Thioredoxin reductase r 98.0 4.3E-06 1.5E-10 72.4 4.0 33 5-37 2-34 (180)
172 2pyx_A Tryptophan halogenase; 98.0 3.5E-06 1.2E-10 86.1 4.0 54 232-286 175-230 (526)
173 1y56_A Hypothetical protein PH 97.9 2.4E-06 8.1E-11 86.6 2.4 41 4-45 108-148 (493)
174 2gag_A Heterotetrameric sarcos 97.9 3.1E-06 1.1E-10 92.6 3.4 41 4-44 128-168 (965)
175 3gyx_A Adenylylsulfate reducta 97.9 4.4E-06 1.5E-10 87.3 4.1 53 232-284 166-228 (662)
176 1ps9_A 2,4-dienoyl-COA reducta 97.9 6.6E-06 2.3E-10 86.6 5.2 42 3-44 372-413 (671)
177 3s5w_A L-ornithine 5-monooxyge 97.9 4.1E-06 1.4E-10 84.1 3.4 41 3-43 29-74 (463)
178 1kdg_A CDH, cellobiose dehydro 97.9 6.5E-06 2.2E-10 84.5 4.6 37 3-39 6-42 (546)
179 1jnr_A Adenylylsulfate reducta 97.9 7E-06 2.4E-10 85.8 4.7 52 232-284 151-213 (643)
180 1lqt_A FPRA; NADP+ derivative, 97.9 4.9E-06 1.7E-10 83.4 3.2 42 3-44 2-50 (456)
181 1q1r_A Putidaredoxin reductase 97.8 1E-05 3.5E-10 80.5 4.9 58 232-289 191-250 (431)
182 2weu_A Tryptophan 5-halogenase 97.8 5.6E-06 1.9E-10 84.2 3.0 55 232-287 173-228 (511)
183 3qvp_A Glucose oxidase; oxidor 97.8 8.2E-06 2.8E-10 84.0 4.1 35 3-37 18-53 (583)
184 2x8g_A Thioredoxin glutathione 97.8 9.3E-06 3.2E-10 84.3 4.0 42 3-44 106-155 (598)
185 1hyu_A AHPF, alkyl hydroperoxi 97.8 1.2E-05 4E-10 82.1 4.5 40 3-44 211-250 (521)
186 2v3a_A Rubredoxin reductase; a 97.8 1.2E-05 4.1E-10 78.6 4.4 56 232-289 187-243 (384)
187 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.3E-10 88.4 4.7 40 4-43 187-227 (1025)
188 3kd9_A Coenzyme A disulfide re 97.8 1.2E-05 4.1E-10 80.4 4.0 55 232-289 190-244 (449)
189 3fim_B ARYL-alcohol oxidase; A 97.8 1.1E-05 3.7E-10 82.9 3.5 37 4-40 2-39 (566)
190 1pn0_A Phenol 2-monooxygenase; 97.7 1.4E-05 4.6E-10 84.0 4.0 36 4-39 8-48 (665)
191 3h28_A Sulfide-quinone reducta 97.7 1.6E-05 5.5E-10 79.0 3.6 39 5-43 3-43 (430)
192 1cjc_A Protein (adrenodoxin re 97.7 1.8E-05 6.2E-10 79.3 3.9 42 3-44 5-48 (460)
193 1m6i_A Programmed cell death p 97.7 2.1E-05 7E-10 79.7 4.1 56 232-289 226-282 (493)
194 3sx6_A Sulfide-quinone reducta 97.7 1.8E-05 6.3E-10 78.7 3.6 39 1-39 1-42 (437)
195 1coy_A Cholesterol oxidase; ox 97.7 2.3E-05 8E-10 79.6 4.4 38 2-39 9-46 (507)
196 1n4w_A CHOD, cholesterol oxida 97.7 2.4E-05 8.2E-10 79.4 4.3 38 3-40 4-41 (504)
197 2cdu_A NADPH oxidase; flavoenz 97.6 2.6E-05 9E-10 78.0 4.0 57 232-289 191-247 (452)
198 2gqw_A Ferredoxin reductase; f 97.6 3.2E-05 1.1E-09 76.3 4.3 52 232-289 187-239 (408)
199 3ics_A Coenzyme A-disulfide re 97.6 3.1E-05 1.1E-09 80.2 4.2 53 232-288 228-281 (588)
200 2jbv_A Choline oxidase; alcoho 97.6 3.7E-05 1.3E-09 78.8 4.7 39 3-41 12-51 (546)
201 3h8l_A NADH oxidase; membrane 97.6 2.2E-05 7.7E-10 77.3 2.8 52 232-289 218-270 (409)
202 2bc0_A NADH oxidase; flavoprot 97.5 3.5E-05 1.2E-09 77.9 3.5 56 232-289 236-291 (490)
203 1gpe_A Protein (glucose oxidas 97.5 4.6E-05 1.6E-09 78.7 4.4 37 3-39 23-60 (587)
204 1nhp_A NADH peroxidase; oxidor 97.5 4.4E-05 1.5E-09 76.2 4.0 56 232-289 191-246 (447)
205 3cgb_A Pyridine nucleotide-dis 97.5 5.4E-05 1.9E-09 76.3 4.0 56 232-289 227-282 (480)
206 1xhc_A NADH oxidase /nitrite r 97.5 6.7E-05 2.3E-09 72.8 4.4 35 5-40 9-43 (367)
207 3ntd_A FAD-dependent pyridine 97.4 7.8E-05 2.7E-09 76.7 3.9 36 5-40 2-39 (565)
208 3klj_A NAD(FAD)-dependent dehy 97.2 0.00022 7.5E-09 69.7 4.9 39 3-41 8-46 (385)
209 4g6h_A Rotenone-insensitive NA 97.2 0.00018 6.3E-09 72.8 4.3 35 4-38 42-76 (502)
210 4eqs_A Coenzyme A disulfide re 97.1 0.00027 9.4E-09 70.2 4.2 52 232-289 188-240 (437)
211 3vrd_B FCCB subunit, flavocyto 97.1 0.00023 7.8E-09 69.8 3.3 38 5-42 3-42 (401)
212 3hyw_A Sulfide-quinone reducta 97.1 0.00024 8.1E-09 70.5 3.4 37 1-39 1-39 (430)
213 4b63_A L-ornithine N5 monooxyg 96.9 0.00011 3.9E-09 74.3 -0.4 40 3-42 38-77 (501)
214 1nhp_A NADH peroxidase; oxidor 95.8 0.0064 2.2E-07 60.4 4.7 38 4-41 149-186 (447)
215 3klj_A NAD(FAD)-dependent dehy 95.8 0.0058 2E-07 59.5 4.0 38 5-42 147-184 (385)
216 3fwz_A Inner membrane protein 95.7 0.0085 2.9E-07 49.1 4.1 33 5-37 8-40 (140)
217 4e12_A Diketoreductase; oxidor 95.6 0.0088 3E-07 55.5 4.6 37 1-37 1-37 (283)
218 2g1u_A Hypothetical protein TM 95.6 0.0079 2.7E-07 50.3 3.8 33 5-37 20-52 (155)
219 3llv_A Exopolyphosphatase-rela 95.6 0.0096 3.3E-07 48.7 4.2 33 5-37 7-39 (141)
220 1id1_A Putative potassium chan 95.6 0.011 3.9E-07 49.1 4.7 34 4-37 3-36 (153)
221 4gcm_A TRXR, thioredoxin reduc 95.6 0.0091 3.1E-07 55.9 4.4 36 5-40 146-181 (312)
222 1lss_A TRK system potassium up 95.5 0.01 3.5E-07 48.1 4.1 33 5-37 5-37 (140)
223 1lvl_A Dihydrolipoamide dehydr 95.3 0.01 3.5E-07 59.1 4.0 37 5-41 172-208 (458)
224 2eq6_A Pyruvate dehydrogenase 95.2 0.013 4.6E-07 58.4 4.5 37 5-41 170-206 (464)
225 2v3a_A Rubredoxin reductase; a 95.2 0.014 4.9E-07 56.5 4.7 39 4-42 145-183 (384)
226 1ebd_A E3BD, dihydrolipoamide 95.1 0.014 4.8E-07 58.0 4.4 37 5-41 171-207 (455)
227 2yqu_A 2-oxoglutarate dehydrog 95.1 0.014 4.8E-07 58.0 4.3 36 5-40 168-203 (455)
228 1xhc_A NADH oxidase /nitrite r 95.1 0.013 4.6E-07 56.5 4.0 37 5-41 144-180 (367)
229 1v59_A Dihydrolipoamide dehydr 95.1 0.016 5.3E-07 58.1 4.6 37 5-41 184-220 (478)
230 4a5l_A Thioredoxin reductase; 94.9 0.018 6.3E-07 53.7 4.3 34 5-38 153-186 (314)
231 3ado_A Lambda-crystallin; L-gu 94.9 0.016 5.4E-07 54.6 3.7 33 5-37 7-39 (319)
232 3ic5_A Putative saccharopine d 94.9 0.021 7E-07 44.7 3.9 33 5-37 6-39 (118)
233 2gqw_A Ferredoxin reductase; f 94.8 0.023 7.7E-07 55.7 4.7 39 4-42 145-183 (408)
234 1ges_A Glutathione reductase; 94.8 0.02 6.8E-07 56.9 4.3 37 5-41 168-204 (450)
235 1bg6_A N-(1-D-carboxylethyl)-L 94.8 0.019 6.7E-07 54.9 4.1 37 1-37 1-37 (359)
236 3qha_A Putative oxidoreductase 94.5 0.028 9.7E-07 52.4 4.5 35 4-38 15-49 (296)
237 2r9z_A Glutathione amide reduc 94.5 0.026 9E-07 56.2 4.3 36 5-40 167-202 (463)
238 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.031 1.1E-06 52.2 4.6 33 5-37 16-48 (302)
239 3c85_A Putative glutathione-re 94.4 0.024 8.2E-07 48.6 3.4 33 5-37 40-73 (183)
240 2hmt_A YUAA protein; RCK, KTN, 94.3 0.028 9.5E-07 45.7 3.5 33 5-37 7-39 (144)
241 3cgb_A Pyridine nucleotide-dis 94.3 0.021 7.1E-07 57.2 3.1 38 4-41 186-223 (480)
242 3i83_A 2-dehydropantoate 2-red 94.3 0.032 1.1E-06 52.7 4.2 33 5-37 3-35 (320)
243 2ewd_A Lactate dehydrogenase,; 94.2 0.031 1.1E-06 52.7 4.0 37 1-37 1-38 (317)
244 2bc0_A NADH oxidase; flavoprot 94.2 0.032 1.1E-06 56.0 4.4 37 5-41 195-231 (490)
245 3hn2_A 2-dehydropantoate 2-red 94.2 0.032 1.1E-06 52.4 4.1 33 5-37 3-35 (312)
246 1zmd_A Dihydrolipoyl dehydroge 94.2 0.034 1.2E-06 55.5 4.5 37 5-41 179-215 (474)
247 1q1r_A Putidaredoxin reductase 94.1 0.037 1.3E-06 54.5 4.5 37 5-41 150-186 (431)
248 2a8x_A Dihydrolipoyl dehydroge 94.1 0.035 1.2E-06 55.2 4.3 37 5-41 172-208 (464)
249 1ojt_A Surface protein; redox- 94.1 0.029 9.8E-07 56.2 3.7 37 5-41 186-222 (482)
250 3ic9_A Dihydrolipoamide dehydr 94.0 0.038 1.3E-06 55.5 4.5 37 5-41 175-211 (492)
251 2q0l_A TRXR, thioredoxin reduc 93.9 0.042 1.4E-06 51.2 4.3 35 5-39 144-178 (311)
252 2dpo_A L-gulonate 3-dehydrogen 93.9 0.036 1.2E-06 52.2 3.8 33 5-37 7-39 (319)
253 3ef6_A Toluene 1,2-dioxygenase 93.9 0.041 1.4E-06 53.8 4.3 39 4-42 143-181 (410)
254 3l4b_C TRKA K+ channel protien 93.9 0.034 1.2E-06 49.2 3.4 32 6-37 2-33 (218)
255 3gwf_A Cyclohexanone monooxyge 93.8 0.044 1.5E-06 55.7 4.5 34 5-38 179-212 (540)
256 3d1c_A Flavin-containing putat 93.8 0.037 1.3E-06 52.9 3.8 34 5-38 167-200 (369)
257 3kd9_A Coenzyme A disulfide re 93.8 0.048 1.6E-06 54.0 4.6 38 5-42 149-186 (449)
258 1onf_A GR, grase, glutathione 93.8 0.045 1.5E-06 55.1 4.4 37 5-41 177-213 (500)
259 1fl2_A Alkyl hydroperoxide red 93.7 0.046 1.6E-06 50.8 4.1 35 5-39 145-179 (310)
260 3lk7_A UDP-N-acetylmuramoylala 93.7 0.05 1.7E-06 54.0 4.6 34 5-38 10-43 (451)
261 2hqm_A GR, grase, glutathione 93.7 0.046 1.6E-06 54.7 4.3 36 5-40 186-221 (479)
262 1t2d_A LDH-P, L-lactate dehydr 93.6 0.054 1.8E-06 51.1 4.5 37 1-37 1-38 (322)
263 1dxl_A Dihydrolipoamide dehydr 93.6 0.03 1E-06 55.8 2.9 37 5-41 178-214 (470)
264 3uox_A Otemo; baeyer-villiger 93.5 0.049 1.7E-06 55.5 4.3 34 5-38 186-219 (545)
265 3g79_A NDP-N-acetyl-D-galactos 93.5 0.048 1.6E-06 54.3 4.1 35 4-38 18-54 (478)
266 4e21_A 6-phosphogluconate dehy 93.5 0.05 1.7E-06 52.2 4.1 37 1-37 19-55 (358)
267 4eqs_A Coenzyme A disulfide re 93.5 0.043 1.5E-06 54.2 3.8 37 5-41 148-184 (437)
268 1vdc_A NTR, NADPH dependent th 93.5 0.055 1.9E-06 50.9 4.4 35 5-39 160-194 (333)
269 1ks9_A KPA reductase;, 2-dehyd 93.5 0.052 1.8E-06 50.1 4.1 33 6-38 2-34 (291)
270 2raf_A Putative dinucleotide-b 93.4 0.059 2E-06 47.4 4.1 34 5-38 20-53 (209)
271 2q7v_A Thioredoxin reductase; 93.4 0.059 2E-06 50.6 4.4 36 5-40 153-188 (325)
272 1trb_A Thioredoxin reductase; 93.4 0.06 2E-06 50.3 4.3 35 5-39 146-180 (320)
273 2a87_A TRXR, TR, thioredoxin r 93.4 0.06 2.1E-06 50.8 4.4 35 5-39 156-190 (335)
274 2qae_A Lipoamide, dihydrolipoy 93.3 0.056 1.9E-06 53.8 4.3 37 5-41 175-211 (468)
275 1zk7_A HGII, reductase, mercur 93.3 0.057 1.9E-06 53.8 4.3 37 5-41 177-213 (467)
276 2y0c_A BCEC, UDP-glucose dehyd 93.3 0.056 1.9E-06 54.0 4.2 33 5-37 9-41 (478)
277 2xve_A Flavin-containing monoo 93.3 0.056 1.9E-06 53.8 4.2 35 5-39 198-232 (464)
278 2zbw_A Thioredoxin reductase; 93.3 0.063 2.2E-06 50.5 4.3 35 5-39 153-187 (335)
279 1zej_A HBD-9, 3-hydroxyacyl-CO 93.2 0.062 2.1E-06 49.9 4.1 33 4-37 12-44 (293)
280 3oj0_A Glutr, glutamyl-tRNA re 93.2 0.067 2.3E-06 43.8 3.9 33 5-37 22-54 (144)
281 3fg2_P Putative rubredoxin red 93.2 0.068 2.3E-06 52.1 4.5 38 5-42 143-180 (404)
282 3lxd_A FAD-dependent pyridine 93.2 0.065 2.2E-06 52.4 4.4 39 4-42 152-190 (415)
283 4ap3_A Steroid monooxygenase; 93.1 0.049 1.7E-06 55.5 3.5 34 5-38 192-225 (549)
284 3ghy_A Ketopantoate reductase 93.1 0.064 2.2E-06 50.9 4.1 33 4-36 3-35 (335)
285 3g17_A Similar to 2-dehydropan 93.1 0.044 1.5E-06 51.0 3.0 33 5-37 3-35 (294)
286 4a7p_A UDP-glucose dehydrogena 93.1 0.067 2.3E-06 52.8 4.3 35 4-38 8-42 (446)
287 2gv8_A Monooxygenase; FMO, FAD 93.1 0.066 2.3E-06 52.9 4.3 35 5-39 213-248 (447)
288 2cdu_A NADPH oxidase; flavoenz 93.0 0.15 5.2E-06 50.4 6.9 37 5-41 1-39 (452)
289 3cky_A 2-hydroxymethyl glutara 93.0 0.071 2.4E-06 49.6 4.3 37 1-37 1-37 (301)
290 3mog_A Probable 3-hydroxybutyr 93.0 0.068 2.3E-06 53.4 4.3 34 4-37 5-38 (483)
291 3gg2_A Sugar dehydrogenase, UD 93.0 0.067 2.3E-06 53.0 4.2 33 5-37 3-35 (450)
292 3ntd_A FAD-dependent pyridine 92.9 0.073 2.5E-06 54.3 4.4 37 5-41 152-188 (565)
293 2x5o_A UDP-N-acetylmuramoylala 92.9 0.065 2.2E-06 53.0 3.9 35 5-39 6-40 (439)
294 3cty_A Thioredoxin reductase; 92.8 0.075 2.6E-06 49.7 4.2 35 5-39 156-190 (319)
295 2ew2_A 2-dehydropantoate 2-red 92.8 0.073 2.5E-06 49.7 4.0 32 6-37 5-36 (316)
296 4g65_A TRK system potassium up 92.8 0.061 2.1E-06 53.5 3.5 32 6-37 5-36 (461)
297 3doj_A AT3G25530, dehydrogenas 92.7 0.085 2.9E-06 49.4 4.4 34 5-38 22-55 (310)
298 3k6j_A Protein F01G10.3, confi 92.7 0.072 2.5E-06 52.7 3.9 34 5-38 55-88 (460)
299 3tl2_A Malate dehydrogenase; c 92.7 0.088 3E-06 49.5 4.3 34 3-36 7-41 (315)
300 3k96_A Glycerol-3-phosphate de 92.7 0.087 3E-06 50.5 4.4 33 5-37 30-62 (356)
301 1evy_A Glycerol-3-phosphate de 92.7 0.06 2.1E-06 51.7 3.3 32 6-37 17-48 (366)
302 2q3e_A UDP-glucose 6-dehydroge 92.7 0.073 2.5E-06 53.0 4.0 37 1-37 2-40 (467)
303 3urh_A Dihydrolipoyl dehydroge 92.7 0.067 2.3E-06 53.6 3.7 37 5-41 199-235 (491)
304 3l8k_A Dihydrolipoyl dehydroge 92.6 0.083 2.8E-06 52.6 4.3 37 5-41 173-209 (466)
305 3oc4_A Oxidoreductase, pyridin 92.6 0.087 3E-06 52.2 4.4 37 5-41 148-184 (452)
306 3dk9_A Grase, GR, glutathione 92.6 0.084 2.9E-06 52.7 4.3 36 5-40 188-223 (478)
307 1zcj_A Peroxisomal bifunctiona 92.6 0.096 3.3E-06 52.1 4.6 33 5-37 38-70 (463)
308 2gmh_A Electron transfer flavo 92.5 0.31 1.1E-05 50.0 8.6 39 4-42 35-79 (584)
309 3ab1_A Ferredoxin--NADP reduct 92.5 0.099 3.4E-06 49.8 4.6 36 5-40 164-199 (360)
310 3itj_A Thioredoxin reductase 1 92.5 0.095 3.2E-06 49.2 4.3 36 5-40 174-209 (338)
311 3ego_A Probable 2-dehydropanto 92.5 0.095 3.2E-06 49.1 4.2 32 5-37 3-34 (307)
312 4dio_A NAD(P) transhydrogenase 92.4 0.09 3.1E-06 51.0 4.1 34 5-38 191-224 (405)
313 1mv8_A GMD, GDP-mannose 6-dehy 92.4 0.085 2.9E-06 52.1 4.0 32 6-37 2-33 (436)
314 3dfz_A SIRC, precorrin-2 dehyd 92.4 0.11 3.9E-06 46.0 4.4 33 4-36 31-63 (223)
315 2weu_A Tryptophan 5-halogenase 92.4 0.29 1E-05 49.1 8.0 35 4-38 2-39 (511)
316 2uyy_A N-PAC protein; long-cha 92.3 0.11 3.7E-06 48.7 4.4 35 4-38 30-64 (316)
317 1pzg_A LDH, lactate dehydrogen 92.2 0.1 3.4E-06 49.5 4.1 33 5-37 10-43 (331)
318 1z82_A Glycerol-3-phosphate de 92.2 0.1 3.5E-06 49.5 4.1 33 4-36 14-46 (335)
319 1kyq_A Met8P, siroheme biosynt 92.2 0.07 2.4E-06 48.9 2.8 34 4-37 13-46 (274)
320 2x8g_A Thioredoxin glutathione 92.1 0.093 3.2E-06 54.0 4.1 32 5-36 287-318 (598)
321 3lad_A Dihydrolipoamide dehydr 92.1 0.11 3.7E-06 51.8 4.4 37 5-41 181-217 (476)
322 1lld_A L-lactate dehydrogenase 92.1 0.1 3.4E-06 49.1 3.9 33 5-37 8-42 (319)
323 3vtf_A UDP-glucose 6-dehydroge 92.1 0.094 3.2E-06 51.5 3.8 33 5-37 22-54 (444)
324 3s5w_A L-ornithine 5-monooxyge 92.0 0.076 2.6E-06 52.6 3.2 35 4-38 227-263 (463)
325 2e4g_A Tryptophan halogenase; 92.0 0.32 1.1E-05 49.4 8.0 36 3-38 24-62 (550)
326 4huj_A Uncharacterized protein 91.9 0.055 1.9E-06 48.0 1.8 33 5-37 24-57 (220)
327 3dtt_A NADP oxidoreductase; st 91.9 0.12 4.2E-06 46.5 4.2 33 5-37 20-52 (245)
328 3l6d_A Putative oxidoreductase 91.9 0.14 4.7E-06 47.9 4.6 34 4-37 9-42 (306)
329 3pef_A 6-phosphogluconate dehy 91.9 0.1 3.6E-06 48.2 3.7 33 6-38 3-35 (287)
330 3eag_A UDP-N-acetylmuramate:L- 91.9 0.13 4.5E-06 48.5 4.5 34 5-38 5-39 (326)
331 3g0o_A 3-hydroxyisobutyrate de 91.9 0.12 4E-06 48.3 4.1 33 5-37 8-40 (303)
332 3ics_A Coenzyme A-disulfide re 91.7 0.13 4.5E-06 52.8 4.5 38 5-42 188-225 (588)
333 2hjr_A Malate dehydrogenase; m 91.6 0.13 4.3E-06 48.7 4.1 33 5-37 15-48 (328)
334 2cul_A Glucose-inhibited divis 91.6 0.38 1.3E-05 42.7 7.1 55 232-288 68-124 (232)
335 3p2y_A Alanine dehydrogenase/p 91.6 0.094 3.2E-06 50.4 3.1 33 5-37 185-217 (381)
336 3hwr_A 2-dehydropantoate 2-red 91.5 0.12 4.3E-06 48.5 3.9 32 5-37 20-51 (318)
337 3l9w_A Glutathione-regulated p 91.5 0.13 4.3E-06 50.4 4.1 33 5-37 5-37 (413)
338 3pdu_A 3-hydroxyisobutyrate de 91.5 0.1 3.6E-06 48.2 3.3 33 6-38 3-35 (287)
339 1hyu_A AHPF, alkyl hydroperoxi 91.5 0.1 3.4E-06 52.8 3.4 36 5-40 356-391 (521)
340 2aef_A Calcium-gated potassium 91.5 0.083 2.8E-06 47.2 2.5 33 4-37 9-41 (234)
341 2izz_A Pyrroline-5-carboxylate 91.5 0.12 4.2E-06 48.7 3.8 35 3-37 21-59 (322)
342 2qyt_A 2-dehydropantoate 2-red 91.5 0.09 3.1E-06 49.2 2.8 31 6-36 10-46 (317)
343 2v6b_A L-LDH, L-lactate dehydr 91.4 0.13 4.5E-06 48.0 3.9 32 6-37 2-35 (304)
344 1mo9_A ORF3; nucleotide bindin 91.4 0.37 1.3E-05 48.6 7.6 58 232-289 255-316 (523)
345 2vns_A Metalloreductase steap3 91.4 0.15 5.3E-06 44.8 4.2 33 5-37 29-61 (215)
346 3pid_A UDP-glucose 6-dehydroge 91.3 0.13 4.4E-06 50.5 3.8 32 5-37 37-68 (432)
347 1jay_A Coenzyme F420H2:NADP+ o 91.3 0.16 5.3E-06 44.5 4.1 32 6-37 2-34 (212)
348 3atr_A Conserved archaeal prot 91.2 0.42 1.4E-05 47.2 7.6 54 232-286 100-159 (453)
349 2pv7_A T-protein [includes: ch 91.2 0.16 5.3E-06 47.3 4.1 33 6-38 23-56 (298)
350 1dlj_A UDP-glucose dehydrogena 91.2 0.14 4.7E-06 50.0 3.9 31 6-37 2-32 (402)
351 4dll_A 2-hydroxy-3-oxopropiona 91.2 0.15 5E-06 48.0 4.0 33 5-37 32-64 (320)
352 4b1b_A TRXR, thioredoxin reduc 91.1 0.15 5E-06 51.8 4.1 35 5-39 224-258 (542)
353 3dgz_A Thioredoxin reductase 2 91.1 0.18 6E-06 50.5 4.7 33 5-37 186-218 (488)
354 3ojo_A CAP5O; rossmann fold, c 91.1 0.15 5.1E-06 50.1 4.0 33 5-37 12-44 (431)
355 1txg_A Glycerol-3-phosphate de 91.0 0.12 3.9E-06 48.9 3.2 30 6-35 2-31 (335)
356 2zyd_A 6-phosphogluconate dehy 91.0 0.16 5.5E-06 50.7 4.3 35 3-37 14-48 (480)
357 3f8d_A Thioredoxin reductase ( 91.0 0.15 5E-06 47.4 3.8 37 5-41 155-191 (323)
358 3qfa_A Thioredoxin reductase 1 90.9 0.19 6.4E-06 50.8 4.7 32 5-36 211-242 (519)
359 2h78_A Hibadh, 3-hydroxyisobut 90.9 0.16 5.6E-06 47.1 4.0 33 5-37 4-36 (302)
360 3r9u_A Thioredoxin reductase; 90.8 0.17 5.9E-06 46.8 4.1 35 5-39 148-182 (315)
361 3c24_A Putative oxidoreductase 90.7 0.17 5.8E-06 46.7 3.9 32 6-37 13-45 (286)
362 3lzw_A Ferredoxin--NADP reduct 90.7 0.2 6.7E-06 46.8 4.4 36 5-40 155-190 (332)
363 3iwa_A FAD-dependent pyridine 90.6 0.15 5.2E-06 50.7 3.8 37 5-41 160-197 (472)
364 3fbs_A Oxidoreductase; structu 90.6 0.21 7.1E-06 45.8 4.4 33 5-38 142-174 (297)
365 3ius_A Uncharacterized conserv 90.6 0.2 6.7E-06 45.9 4.3 33 5-37 6-38 (286)
366 2vdc_G Glutamate synthase [NAD 90.5 0.17 5.9E-06 50.1 4.0 35 5-39 265-300 (456)
367 2wpf_A Trypanothione reductase 90.5 0.46 1.6E-05 47.6 7.1 45 1-45 4-57 (495)
368 1guz_A Malate dehydrogenase; o 90.5 0.19 6.4E-06 47.1 4.0 32 6-37 2-35 (310)
369 2x3n_A Probable FAD-dependent 90.5 0.44 1.5E-05 46.0 6.8 36 4-39 6-41 (399)
370 1fec_A Trypanothione reductase 90.5 0.44 1.5E-05 47.6 7.0 43 3-45 2-53 (490)
371 3dhn_A NAD-dependent epimerase 90.4 0.16 5.6E-06 44.6 3.4 37 1-37 1-38 (227)
372 4ezb_A Uncharacterized conserv 90.4 0.17 5.8E-06 47.6 3.6 33 5-37 25-58 (317)
373 1xdi_A RV3303C-LPDA; reductase 90.3 0.52 1.8E-05 47.2 7.4 41 4-45 2-45 (499)
374 4gbj_A 6-phosphogluconate dehy 90.3 0.19 6.4E-06 46.8 3.9 33 6-38 7-39 (297)
375 3gpi_A NAD-dependent epimerase 90.3 0.23 7.9E-06 45.5 4.5 34 5-38 4-37 (286)
376 1nyt_A Shikimate 5-dehydrogena 90.3 0.21 7.1E-06 45.8 4.1 33 5-37 120-152 (271)
377 1y6j_A L-lactate dehydrogenase 90.3 0.22 7.6E-06 46.8 4.3 34 4-37 7-42 (318)
378 3dfu_A Uncharacterized protein 90.2 0.098 3.3E-06 46.7 1.7 32 5-36 7-38 (232)
379 4dna_A Probable glutathione re 90.2 0.49 1.7E-05 46.8 7.0 56 232-289 211-268 (463)
380 1jw9_B Molybdopterin biosynthe 90.2 0.17 5.7E-06 45.8 3.3 33 5-37 32-65 (249)
381 2aqj_A Tryptophan halogenase, 90.2 0.56 1.9E-05 47.4 7.6 39 1-39 2-43 (538)
382 3e1t_A Halogenase; flavoprotei 90.1 0.56 1.9E-05 47.1 7.5 36 4-39 7-42 (512)
383 3o0h_A Glutathione reductase; 90.1 0.53 1.8E-05 46.9 7.2 41 4-45 26-66 (484)
384 2wtb_A MFP2, fatty acid multif 90.1 0.19 6.6E-06 52.8 4.1 33 5-37 313-345 (725)
385 2a9f_A Putative malic enzyme ( 90.1 0.2 6.7E-06 48.2 3.7 34 4-37 188-222 (398)
386 3qsg_A NAD-binding phosphogluc 90.0 0.18 6E-06 47.3 3.4 32 5-36 25-57 (312)
387 3gvi_A Malate dehydrogenase; N 90.0 0.24 8.3E-06 46.6 4.3 34 4-37 7-41 (324)
388 2qcu_A Aerobic glycerol-3-phos 90.0 0.48 1.7E-05 47.5 6.8 39 3-41 2-40 (501)
389 1x0v_A GPD-C, GPDH-C, glycerol 90.0 0.13 4.4E-06 49.1 2.4 34 5-38 9-49 (354)
390 3ktd_A Prephenate dehydrogenas 89.9 0.22 7.4E-06 47.3 4.0 33 5-37 9-41 (341)
391 1edz_A 5,10-methylenetetrahydr 89.9 0.24 8.2E-06 46.4 4.1 32 5-36 178-210 (320)
392 1x13_A NAD(P) transhydrogenase 89.9 0.2 7E-06 48.7 3.8 33 5-37 173-205 (401)
393 2gf2_A Hibadh, 3-hydroxyisobut 89.9 0.24 8.2E-06 45.8 4.2 32 6-37 2-33 (296)
394 3dgh_A TRXR-1, thioredoxin red 89.8 0.26 9.1E-06 49.1 4.7 33 5-37 188-220 (483)
395 3ggo_A Prephenate dehydrogenas 89.7 0.22 7.6E-06 46.7 3.9 33 5-37 34-68 (314)
396 2iz1_A 6-phosphogluconate dehy 89.7 0.25 8.7E-06 49.2 4.4 34 4-37 5-38 (474)
397 1ur5_A Malate dehydrogenase; o 89.6 0.26 9.1E-06 46.0 4.3 33 5-37 3-36 (309)
398 2p4q_A 6-phosphogluconate dehy 89.6 0.26 8.8E-06 49.4 4.4 33 5-37 11-43 (497)
399 1pjc_A Protein (L-alanine dehy 89.6 0.25 8.5E-06 47.3 4.1 33 5-37 168-200 (361)
400 1l7d_A Nicotinamide nucleotide 89.6 0.24 8.1E-06 47.9 4.0 33 5-37 173-205 (384)
401 2o3j_A UDP-glucose 6-dehydroge 89.6 0.22 7.4E-06 49.8 3.8 33 5-37 10-44 (481)
402 2f1k_A Prephenate dehydrogenas 89.6 0.24 8.3E-06 45.3 3.9 32 6-37 2-33 (279)
403 4gwg_A 6-phosphogluconate dehy 89.5 0.27 9.3E-06 48.9 4.4 34 4-37 4-37 (484)
404 3phh_A Shikimate dehydrogenase 89.5 0.28 9.7E-06 44.8 4.2 33 5-37 119-151 (269)
405 2pyx_A Tryptophan halogenase; 89.5 0.85 2.9E-05 45.9 8.2 36 3-38 6-53 (526)
406 2ywl_A Thioredoxin reductase r 89.5 0.98 3.3E-05 37.9 7.5 55 232-290 56-111 (180)
407 1yqg_A Pyrroline-5-carboxylate 89.4 0.21 7.2E-06 45.3 3.4 32 6-37 2-34 (263)
408 3pqe_A L-LDH, L-lactate dehydr 89.4 0.26 8.7E-06 46.5 3.9 36 1-36 1-39 (326)
409 1vl6_A Malate oxidoreductase; 89.4 0.24 8.1E-06 47.5 3.7 33 4-36 192-225 (388)
410 3p7m_A Malate dehydrogenase; p 89.4 0.31 1.1E-05 45.8 4.5 34 4-37 5-39 (321)
411 2rcy_A Pyrroline carboxylate r 89.3 0.23 7.9E-06 45.0 3.5 34 5-38 5-42 (262)
412 1a5z_A L-lactate dehydrogenase 89.3 0.21 7.3E-06 46.9 3.3 32 6-37 2-35 (319)
413 3c4n_A Uncharacterized protein 89.3 0.24 8.3E-06 48.1 3.8 39 4-42 36-76 (405)
414 1p77_A Shikimate 5-dehydrogena 89.1 0.23 7.7E-06 45.6 3.3 33 5-37 120-152 (272)
415 3c7a_A Octopine dehydrogenase; 89.0 0.19 6.6E-06 48.9 2.9 29 6-34 4-33 (404)
416 1vpd_A Tartronate semialdehyde 89.0 0.28 9.6E-06 45.4 4.0 32 6-37 7-38 (299)
417 2eez_A Alanine dehydrogenase; 89.0 0.29 9.8E-06 47.0 4.1 33 5-37 167-199 (369)
418 2cvz_A Dehydrogenase, 3-hydrox 89.0 0.3 1E-05 44.8 4.1 31 6-37 3-33 (289)
419 1cjc_A Protein (adrenodoxin re 89.0 0.27 9.4E-06 48.7 4.0 34 5-38 146-200 (460)
420 1hdo_A Biliverdin IX beta redu 88.9 0.34 1.2E-05 41.6 4.3 36 1-37 1-37 (206)
421 1yj8_A Glycerol-3-phosphate de 88.9 0.19 6.5E-06 48.4 2.8 33 6-38 23-62 (375)
422 3gt0_A Pyrroline-5-carboxylate 88.8 0.33 1.1E-05 43.6 4.2 33 5-37 3-39 (247)
423 1hyh_A L-hicdh, L-2-hydroxyiso 88.8 0.24 8.2E-06 46.3 3.3 32 6-37 3-36 (309)
424 2pgd_A 6-phosphogluconate dehy 88.7 0.3 1E-05 48.8 4.1 33 5-37 3-35 (482)
425 1wdk_A Fatty oxidation complex 88.6 0.23 7.8E-06 52.2 3.3 33 5-37 315-347 (715)
426 1m6i_A Programmed cell death p 88.6 0.68 2.3E-05 46.3 6.7 40 1-40 8-49 (493)
427 2egg_A AROE, shikimate 5-dehyd 88.5 0.34 1.2E-05 45.0 4.2 33 5-37 142-175 (297)
428 3tri_A Pyrroline-5-carboxylate 88.4 0.36 1.2E-05 44.4 4.2 34 4-37 3-39 (280)
429 1o94_A Tmadh, trimethylamine d 88.4 0.3 1E-05 51.5 4.1 36 5-41 529-566 (729)
430 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.4 0.31 1.1E-05 48.6 4.0 32 6-37 3-34 (478)
431 4ffl_A PYLC; amino acid, biosy 88.3 0.37 1.2E-05 46.0 4.3 33 6-38 3-35 (363)
432 3d1l_A Putative NADP oxidoredu 88.3 0.3 1E-05 44.3 3.5 33 5-37 11-44 (266)
433 2g5c_A Prephenate dehydrogenas 88.2 0.35 1.2E-05 44.3 4.0 32 6-37 3-36 (281)
434 3d0o_A L-LDH 1, L-lactate dehy 88.1 0.33 1.1E-05 45.6 3.7 35 3-37 5-41 (317)
435 2gag_A Heterotetrameric sarcos 88.0 0.25 8.5E-06 53.9 3.2 37 5-41 285-321 (965)
436 2zxi_A TRNA uridine 5-carboxym 87.9 1.1 3.7E-05 46.1 7.7 39 3-41 26-65 (637)
437 1np3_A Ketol-acid reductoisome 87.9 0.38 1.3E-05 45.6 4.1 32 6-37 18-49 (338)
438 3zwc_A Peroxisomal bifunctiona 87.8 0.36 1.2E-05 50.8 4.2 33 5-37 317-349 (742)
439 2vhw_A Alanine dehydrogenase; 87.8 0.38 1.3E-05 46.3 4.1 33 5-37 169-201 (377)
440 1rp0_A ARA6, thiazole biosynth 87.8 1 3.5E-05 41.3 6.9 55 232-287 119-189 (284)
441 2ahr_A Putative pyrroline carb 87.7 0.44 1.5E-05 43.0 4.3 33 5-37 4-36 (259)
442 1ez4_A Lactate dehydrogenase; 87.6 0.36 1.2E-05 45.3 3.7 37 1-37 2-40 (318)
443 1nvt_A Shikimate 5'-dehydrogen 87.6 0.41 1.4E-05 44.2 4.0 32 5-37 129-160 (287)
444 1qyc_A Phenylcoumaran benzylic 87.4 0.49 1.7E-05 43.6 4.6 37 1-37 1-38 (308)
445 3ew7_A LMO0794 protein; Q8Y8U8 87.3 0.48 1.6E-05 41.2 4.2 32 6-37 2-34 (221)
446 2hk9_A Shikimate dehydrogenase 87.2 0.37 1.3E-05 44.2 3.5 33 5-37 130-162 (275)
447 3k30_A Histamine dehydrogenase 86.9 0.45 1.5E-05 49.8 4.3 38 5-42 524-563 (690)
448 3vps_A TUNA, NAD-dependent epi 86.9 0.45 1.5E-05 44.1 4.0 35 4-38 7-42 (321)
449 1oju_A MDH, malate dehydrogena 86.8 0.38 1.3E-05 44.6 3.3 32 6-37 2-35 (294)
450 3ces_A MNMG, tRNA uridine 5-ca 86.8 1.3 4.5E-05 45.6 7.6 38 3-40 27-65 (651)
451 1a4i_A Methylenetetrahydrofola 86.6 0.57 2E-05 43.2 4.3 33 4-36 165-198 (301)
452 3don_A Shikimate dehydrogenase 86.6 0.44 1.5E-05 43.7 3.6 33 5-37 118-151 (277)
453 1pjq_A CYSG, siroheme synthase 86.6 0.46 1.6E-05 47.0 4.0 33 4-36 12-44 (457)
454 2rir_A Dipicolinate synthase, 86.6 0.52 1.8E-05 43.7 4.2 33 5-37 158-190 (300)
455 2d5c_A AROE, shikimate 5-dehyd 86.6 0.5 1.7E-05 42.9 4.0 32 6-37 118-149 (263)
456 3r6d_A NAD-dependent epimerase 86.5 0.61 2.1E-05 40.7 4.4 32 6-37 7-40 (221)
457 4gx0_A TRKA domain protein; me 86.4 0.49 1.7E-05 48.2 4.2 34 5-38 349-382 (565)
458 3u62_A Shikimate dehydrogenase 86.4 0.54 1.9E-05 42.5 4.1 32 6-37 110-142 (253)
459 4hv4_A UDP-N-acetylmuramate--L 86.4 0.49 1.7E-05 47.4 4.1 33 5-37 23-56 (494)
460 1gte_A Dihydropyrimidine dehyd 86.4 0.43 1.5E-05 52.4 4.0 33 6-38 334-367 (1025)
461 3ldh_A Lactate dehydrogenase; 86.4 0.41 1.4E-05 45.1 3.3 33 5-37 22-56 (330)
462 1lnq_A MTHK channels, potassiu 86.3 0.38 1.3E-05 45.5 3.1 32 5-37 116-147 (336)
463 1ldn_A L-lactate dehydrogenase 86.3 0.5 1.7E-05 44.3 3.9 33 5-37 7-41 (316)
464 1qyd_A Pinoresinol-lariciresin 86.3 0.62 2.1E-05 43.1 4.6 37 1-37 1-38 (313)
465 3enk_A UDP-glucose 4-epimerase 86.3 0.61 2.1E-05 43.7 4.6 38 1-38 2-40 (341)
466 3h2s_A Putative NADH-flavin re 86.2 0.58 2E-05 40.9 4.1 31 7-37 3-34 (224)
467 3e8x_A Putative NAD-dependent 86.2 0.54 1.8E-05 41.6 3.9 33 5-37 22-55 (236)
468 1w4x_A Phenylacetone monooxyge 86.2 0.42 1.4E-05 48.4 3.5 34 5-38 187-220 (542)
469 2qrj_A Saccharopine dehydrogen 86.2 0.36 1.2E-05 46.5 2.8 39 4-42 214-257 (394)
470 3ond_A Adenosylhomocysteinase; 86.2 0.61 2.1E-05 46.2 4.5 34 4-37 265-298 (488)
471 4a9w_A Monooxygenase; baeyer-v 86.2 1.2 4.2E-05 41.5 6.7 54 232-286 76-129 (357)
472 1i36_A Conserved hypothetical 86.2 0.44 1.5E-05 43.1 3.4 30 6-35 2-31 (264)
473 2i6t_A Ubiquitin-conjugating e 86.1 0.43 1.5E-05 44.4 3.3 33 5-37 15-49 (303)
474 1k0i_A P-hydroxybenzoate hydro 86.1 1.7 5.8E-05 41.6 7.7 55 232-287 103-161 (394)
475 1b0a_A Protein (fold bifunctio 86.0 0.65 2.2E-05 42.6 4.3 34 4-37 159-193 (288)
476 1yb4_A Tartronic semialdehyde 86.0 0.41 1.4E-05 44.1 3.1 31 6-37 5-35 (295)
477 3d4o_A Dipicolinate synthase s 85.9 0.59 2E-05 43.2 4.2 33 5-37 156-188 (293)
478 3nep_X Malate dehydrogenase; h 85.9 0.47 1.6E-05 44.4 3.5 32 6-37 2-35 (314)
479 1ff9_A Saccharopine reductase; 85.9 0.63 2.1E-05 46.0 4.5 34 4-37 3-36 (450)
480 3tnl_A Shikimate dehydrogenase 85.8 0.64 2.2E-05 43.5 4.3 32 5-36 155-187 (315)
481 3fbt_A Chorismate mutase and s 85.7 0.68 2.3E-05 42.6 4.3 33 5-37 123-156 (282)
482 4b4o_A Epimerase family protei 85.5 0.7 2.4E-05 42.5 4.5 34 6-39 2-36 (298)
483 3dqp_A Oxidoreductase YLBE; al 85.4 0.65 2.2E-05 40.5 4.0 32 6-37 2-34 (219)
484 1y7t_A Malate dehydrogenase; N 85.3 0.49 1.7E-05 44.5 3.3 37 1-37 1-45 (327)
485 3k5i_A Phosphoribosyl-aminoimi 85.2 0.78 2.7E-05 44.5 4.8 34 1-34 21-54 (403)
486 3jyo_A Quinate/shikimate dehyd 85.2 0.7 2.4E-05 42.5 4.2 33 5-37 128-161 (283)
487 3o8q_A Shikimate 5-dehydrogena 85.2 0.76 2.6E-05 42.2 4.5 33 5-37 127-160 (281)
488 3ngx_A Bifunctional protein fo 85.1 0.72 2.5E-05 42.0 4.1 32 5-36 151-183 (276)
489 1zud_1 Adenylyltransferase THI 85.0 0.72 2.5E-05 41.6 4.2 32 5-36 29-61 (251)
490 3pwz_A Shikimate dehydrogenase 84.9 0.74 2.5E-05 42.1 4.2 33 5-37 121-154 (272)
491 4aj2_A L-lactate dehydrogenase 84.7 0.79 2.7E-05 43.2 4.4 32 5-36 20-53 (331)
492 3b1f_A Putative prephenate deh 84.7 0.57 2E-05 43.1 3.4 33 5-37 7-41 (290)
493 4a26_A Putative C-1-tetrahydro 84.6 0.81 2.8E-05 42.2 4.3 33 5-37 166-199 (300)
494 1n4w_A CHOD, cholesterol oxida 84.6 0.95 3.2E-05 45.4 5.2 56 233-288 222-287 (504)
495 2yjz_A Metalloreductase steap4 84.8 0.19 6.5E-06 43.8 0.0 34 5-38 20-53 (201)
496 3vku_A L-LDH, L-lactate dehydr 84.5 0.58 2E-05 44.0 3.3 32 5-36 10-43 (326)
497 1kf6_A Fumarate reductase flav 84.3 1.4 5E-05 45.1 6.6 40 3-42 4-45 (602)
498 1lqt_A FPRA; NADP+ derivative, 84.3 0.71 2.4E-05 45.7 4.1 34 5-38 148-202 (456)
499 3h8v_A Ubiquitin-like modifier 84.1 0.64 2.2E-05 42.9 3.4 33 4-36 36-69 (292)
500 1mld_A Malate dehydrogenase; o 84.1 0.82 2.8E-05 42.8 4.2 32 6-37 2-36 (314)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.1e-84 Score=650.89 Aligned_cols=440 Identities=49% Similarity=0.871 Sum_probs=401.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
|+++|||||||||++|+++|+.|+++|++|+|+||++++||++++++.++++.+|..+..+|..++.+|+|++|++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 67789999999999999999999999999999999999999999999999999999888788889999999999999999
Q ss_pred ecChHHHHHHHHcCCcceeEEEEeCceEEEe---------CCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhccc
Q 013352 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYN---------KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (444)
Q Consensus 81 ~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~---------~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~ 151 (444)
++.++++++|.++++.+|++|+.++..|++. +|+++++|+++.+.|+++++++.+|+++++|+.++.++.+
T Consensus 97 ~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 97 LVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp ETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred ecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999876 6789999999999999999999999999999999998876
Q ss_pred CCCcccccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCc
Q 013352 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGL 231 (444)
Q Consensus 152 ~~~~~~~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~ 231 (444)
..+.+++.+++...|+.+|++++++++.+++++.++++++..+++.+.|+..++.+++.|+.++++| |++++.||+||+
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~~yp~gG~ 255 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPFIYPLYGL 255 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCT
T ss_pred ccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCceEEECCCH
Confidence 6666666566678999999999999999999998888888766677778899999999999999999 889999999999
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC---CccccccceeEEEEEEecC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL---PNKVRKVGRVARAIAIMSH 307 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~---~~~~~~~~~~~r~i~i~~~ 307 (444)
++|+++|++.++++|++|+++++|++|..++++++++|++ +|++++||+||++++++ |+.++..+++.|++||+++
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~~~~~~v~R~i~I~~~ 335 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKIKKIGQVIRCICILSN 335 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccccccceEEEEEEEEec
Confidence 9999999999999999999999999999856788999998 67899999999999998 7766666789999999999
Q ss_pred CCCCCCCCCeEEEEeCCCccCCCCcEEEEEeCCCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeeeeec
Q 013352 308 PIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDR 387 (444)
Q Consensus 308 ~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 387 (444)
|++.++++.+++|+||+.+++++++||++++|+++++||+|+||+|+||.+++++|++||++++++|+|+.++|+.+++.
T Consensus 336 pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~~~cp~G~~i~~~st~~e~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 415 (475)
T 3p1w_A 336 PIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISDL 415 (475)
T ss_dssp CCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHHTTCSEEEEEEEEEEE
T ss_pred cCcccCCCceEEEEeCCcccCCCCCEEEEEECCCcCcCCCCcEEEEEEeecCCCCHHHHHHHHHHHhcchhheeccchhe
Confidence 99988877899999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCEEEccCCCCCCccHHHHHHHHHHHHHhcCCCccccccchhhhh
Q 013352 388 YEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLSAASA 441 (444)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (444)
|+|++++.++|||||+|||+++|||+++++|++||+||||+++||++.++.+++
T Consensus 416 ~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 469 (475)
T 3p1w_A 416 YVSTSKKPADNIFVTSSYDATSHFETATNDLLQIWENLWGQKLNFDDLNTNADG 469 (475)
T ss_dssp EEESCSSCTTCEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC---------
T ss_pred eeecccCCCCCEEEeCCCCCccchHHHHHHHHHHHHHHhCCcceecCCCccccc
Confidence 999999999999999999999999999999999999999999999976655443
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=3.5e-68 Score=546.97 Aligned_cols=431 Identities=24% Similarity=0.469 Sum_probs=365.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCC---------------------
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNE--------------------- 59 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~--------------------- 59 (444)
|+++|||+|||+|+.|++.|+.|++.|++|+|+||+++|||.+++++++++++|+....
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEE 84 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchh
Confidence 45679999999999999999999999999999999999999999999999998742100
Q ss_pred -------------------------------------------C------------------------------------
Q 013352 60 -------------------------------------------Q------------------------------------ 60 (444)
Q Consensus 60 -------------------------------------------~------------------------------------ 60 (444)
.
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (650)
T 1vg0_A 85 AIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCP 164 (650)
T ss_dssp EEEBCSSCCCEEEEEEEECSCC----------------------------------------------------------
T ss_pred hccccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0
Q ss_pred -----------------------------------------CCCC--------CCCCCCeEEecccceeecChHHHHHHH
Q 013352 61 -----------------------------------------PPAH--------LGSSRDYNVDMIPKFIIANGALVRVLI 91 (444)
Q Consensus 61 -----------------------------------------~~~~--------~~~~~~~~~dlgp~~l~~~~~l~~~l~ 91 (444)
+|.. ++.+|+|+||++|+++++++.++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 165 GPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ----------------------------------------------CCCHHHHHHTGGGCCEESSCCCEESSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeCCeeeeCCcHHHHHHH
Confidence 0000 236899999999999999999999999
Q ss_pred HcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCcccccccCCCCcHHHHH
Q 013352 92 HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELI 171 (444)
Q Consensus 92 ~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~~~~~~~s~~e~~ 171 (444)
++|+.+|++|+.++..|++.+|+++++|+++.+.|.++.+++.+|+.+++|+.++..+.. .|..+. .+...|+.+|+
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p~~~~--~~d~~S~~d~L 321 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HPDEYR--AYEGTTFSEYL 321 (650)
T ss_dssp HHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CHHHHH--TTTTSBHHHHH
T ss_pred HcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-ChHHHh--hhccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998754 333333 33689999999
Q ss_pred HHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHHHHHHHHHHcCcEEEc
Q 013352 172 AKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML 251 (444)
Q Consensus 172 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l 251 (444)
+++++++.+++++.+.++++... ..|+..++.++..|+.++++| |.++++||+||+++|+++|+|.++++||+|++
T Consensus 322 ~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~y-g~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l 397 (650)
T 1vg0_A 322 KTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 397 (650)
T ss_dssp TTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSS-SSSSEEEETTCTTHHHHHHHHHHHHTTCEEES
T ss_pred HHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhh-ccCceEEeCCchhHHHHHHHHHHHHcCCEEEe
Confidence 99999999999988777775432 237778877888999999998 77899999999999999999999999999999
Q ss_pred CCcceeEEEcCC-CcEEEEEe-CCeEEEcCEEEeCCCCCCccccc---cceeEEEEEEecCCCCCCCCC-CeEEEEeCCC
Q 013352 252 NKPECKVEFDEE-GKVVGVTS-EGETAKCKKVVCDPSYLPNKVRK---VGRVARAIAIMSHPIPNTNDS-HSVQVILPQK 325 (444)
Q Consensus 252 ~~~V~~I~~~~~-g~v~gV~~-~g~~i~ad~VI~~~~~~~~~~~~---~~~~~r~i~i~~~~l~~~~~~-~~~~i~~p~~ 325 (444)
+++|++|..+.+ |++++|+. +|++++||+||++|.++|..... .+++.|++|++++|++++... ...++++|+.
T Consensus 398 ~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~ 477 (650)
T 1vg0_A 398 RHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAE 477 (650)
T ss_dssp SCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTTTTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCS
T ss_pred CCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHhccccccceEEEEEEecCCCCCcCCCcceEEEEccCc
Confidence 999999998432 88999986 79999999999999988765432 357899999999998765432 5677888987
Q ss_pred ccCCCCcEEEEEeCCCcccccCCcEEEEEEeecCCCCcccccHhHHhhc-CCccc----------------eeeeeeecc
Q 013352 326 QLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL-GPVDE----------------IFYDIYDRY 388 (444)
Q Consensus 326 ~~~~~~~i~~~~~s~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l-~~~~~----------------~~~~~~~~~ 388 (444)
+ +++++||++++|+++++||+|++|+|+++. ++.+++++|++++++| +++.+ .|+++.+.+
T Consensus 478 ~-g~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~-~~~~~~~eLe~~l~~L~~~~~~~~~~~~~~~~~~vLws~~~~~~~~~ 555 (650)
T 1vg0_A 478 E-PGSFAVRVIELCSSTMTCMKGTYLVHLTCM-SSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSS 555 (650)
T ss_dssp S-TTSCCEEEEEECGGGTSSCTTCEEEEEEEE-CSSCHHHHHHHHHHHHCBSCSCCC-------CCBEEEEEEEEEEECT
T ss_pred c-CCCCCEEEEEeCCCCCCCCCCCEEEEEEee-cCCCHHHHHHHHHHHHhccccccccccccccCCceEEEEEEEeeccc
Confidence 7 467899999999999999999999999988 5779999999999944 66533 266677777
Q ss_pred ---ccCCCCCCCCEEEccCCCCCCccHHHHHHHHHHHHHhcCCCccccccchhhh
Q 013352 389 ---EPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLSAAS 440 (444)
Q Consensus 389 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (444)
+|..++.++|||+|++||+++|||+++++|++||++|||.+-+|-..|+.++
T Consensus 556 ~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~~~e~F~p~~p~~e~ 610 (650)
T 1vg0_A 556 DISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPED 610 (650)
T ss_dssp TCCGGGSSSCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHSTTCCSSCCCC----
T ss_pred ccccccccCCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHcCCCCCCCCCcCccc
Confidence 6776788999999999999999999999999999999999988877665443
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=4.3e-65 Score=516.05 Aligned_cols=439 Identities=52% Similarity=0.929 Sum_probs=372.2
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCC----CCCCCCCCCCeEEecc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQ----PPAHLGSSRDYNVDMI 76 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dlg 76 (444)
|+.++||||||||++||+||++|+++|++|+|+||++++||+++|++.++++.+|..... ++..++..+.|++|++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 456799999999999999999999999999999999999999999998775554432110 0111334567999999
Q ss_pred cceeecChHHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCcc
Q 013352 77 PKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKT 156 (444)
Q Consensus 77 p~~l~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~ 156 (444)
|+++++++.+.++|.++++.++++|..++..|.+.+|+.+++|.+..+.+.+.++++++|+.+++|+.++..+....|..
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 99999999999999999999999999999888888999999999978899999999999999999999988765443433
Q ss_pred cccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHH
Q 013352 157 HEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQ 236 (444)
Q Consensus 157 ~~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~ 236 (444)
+..++....|+.+|++++++++.+++++.+.+.+...+.|...|+...+.++..++.+++.| +.++|.||+||+++|++
T Consensus 168 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~~l~~ 246 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQ 246 (453)
T ss_dssp STTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTTHHHH
T ss_pred hhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHHHHHH
Confidence 32233467899999999999999999887777665544565568888877888888888888 67789999999999999
Q ss_pred HHHHHHHHcCcEEEcCCcceeEEEcC-CCcEEEEEeCCeEEEcCEEEeCCCCCCccccccc-eeEEEEEEecCCCCCCCC
Q 013352 237 AFARLSAVYGGTYMLNKPECKVEFDE-EGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNTND 314 (444)
Q Consensus 237 al~r~~~~~Gg~i~l~~~V~~I~~~~-~g~v~gV~~~g~~i~ad~VI~~~~~~~~~~~~~~-~~~r~i~i~~~~l~~~~~ 314 (444)
+|++.+++.|++|+++++|++|..+. ++++++|+++|+++.||+||++++..+..+++.. ...+++++++++++.++.
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~ 326 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSN 326 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEEESSCCTTSTT
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEEEccccCCCCC
Confidence 99999999999999999999999831 7888889889999999999999887765555445 567888889998876544
Q ss_pred CCeEEEEeCCCccCCCCcEEEEEeCCCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeeeeeccccCCCC
Q 013352 315 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEP 394 (444)
Q Consensus 315 ~~~~~i~~p~~~~~~~~~i~~~~~s~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 394 (444)
..++++++|..+.++++++|++++|..+.+||+|+++++++++++..+++++|++++++|+++++.|.++.+.|+|++.+
T Consensus 327 ~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 406 (453)
T 2bcg_G 327 ADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDG 406 (453)
T ss_dssp CSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHGGGCSCSEEEEEEEEEEEESSCS
T ss_pred CccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCCCCHHHHHHHHHHHhhhHHHhhccchheeeecCCC
Confidence 56788899987777778999999886558899999999999999888999999999999999999999999999999888
Q ss_pred CCCCEEEccCCCCCCccHHHHHHHHHHHHHhcCCCccccccchhhh
Q 013352 395 SLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLSAAS 440 (444)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (444)
..+|||+|++||+++|||+|+++++++|++|+|+++||++.+..+.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (453)
T 2bcg_G 407 SKDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQRQEQEK 452 (453)
T ss_dssp TTTSEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCCCCCC----
T ss_pred CCCCEEECCCCCccccHHHHHHHHHHHHHHHHCCccccccCccccc
Confidence 8899999999999999999999999999999999999997765543
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=5.7e-64 Score=504.82 Aligned_cols=430 Identities=60% Similarity=1.044 Sum_probs=371.5
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecc-hHhHHhhhcCCCCCCCCCCCCCCeEEecccce
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~ 79 (444)
|++++||+|||||++||++|++|+++|++|+|+|+++++||+++|++ +.+.++.+..+..++..++.+++|.+|+||++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 77889999999999999999999999999999999999999999998 54444344332234445566679999999999
Q ss_pred eecChHHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccc
Q 013352 80 IIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 80 l~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
++.++.+.++|.++++.++++|...+..|++.+|+.+.+|.+..+.+.+.++++++|+.+++|+..+..+....|..+..
T Consensus 83 l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 162 (433)
T 1d5t_A 83 LMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEG 162 (433)
T ss_dssp EETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTT
T ss_pred eeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccc
Confidence 99998999999999999999999988888888999999999877888999999999999999999988876544433333
Q ss_pred ccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHHHHH
Q 013352 160 MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFA 239 (444)
Q Consensus 160 ~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~al~ 239 (444)
.+....|+.+|+++++.++.+++++.+.++++..+++...|+..++.++..|..+++.+ |.+++++|+||+++|+++|+
T Consensus 163 ~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l~~~l~ 241 (433)
T 1d5t_A 163 VDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 241 (433)
T ss_dssp CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHHHHHHH
T ss_pred cccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHHHHHHH
Confidence 34567899999999999999999887776776655565668887777777787777777 77789999999999999999
Q ss_pred HHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCCccccccceeEEEEEEecCCCCCCCCCCeEE
Q 013352 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQ 319 (444)
Q Consensus 240 r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~~~~~~~~~~~r~i~i~~~~l~~~~~~~~~~ 319 (444)
+.+++.|++|+++++|++|.. +++++++|+++|+++.||+||+++++.+..+++..+..+++++++++++.++...+++
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 320 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTNDANSCQ 320 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEEESSCCTTSTTCSSEE
T ss_pred HHHHHcCCEEECCCEEEEEEE-eCCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEEEcCcccccCCCceEE
Confidence 999999999999999999998 6788888888999999999999887776655444456678888888887654456789
Q ss_pred EEeCCCccCCCCcEEEEEeCCCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeeeeeccccCCCCCCCCE
Q 013352 320 VILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNC 399 (444)
Q Consensus 320 i~~p~~~~~~~~~i~~~~~s~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (444)
+++|..+.++++.+|++++|.++.+||+|+++++++++++..+++++|++++++|+|+++.|.++.+.|+|++++.++||
T Consensus 321 i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (433)
T 1d5t_A 321 IIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALGLLEPIDQKFVAISDLYEPIDDGSESQV 400 (433)
T ss_dssp EEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHTTTCSCSEEEEEEEEEEEESCCSTTTCE
T ss_pred EEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCCCHHHHHHHHHHHhhhHHhheeccceeeeecCCCCCCCE
Confidence 99998777777899999988888999999999999999998999999999999999999999999999999988888999
Q ss_pred EEccCCCCCCccHHHHHHHHHHHHHhcCCCccc
Q 013352 400 FISTSYDATTHFESTVTDVLNMYTMITGKVLDL 432 (444)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (444)
|+|++||+++|||+|+++++++|+||||+++||
T Consensus 401 ~~~~~~d~~~~~e~~~~~~~~~~~~~~~~~~~~ 433 (433)
T 1d5t_A 401 FCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 433 (433)
T ss_dssp EECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC
T ss_pred EECCCCCccccHHHHHHHHHHHHHHHhCCcCCC
Confidence 999999999999999999999999999999997
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=9.9e-30 Score=260.47 Aligned_cols=320 Identities=17% Similarity=0.242 Sum_probs=194.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecCh
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANG 84 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~~ 84 (444)
.+|||||||++||+||++|+++|++|+||||++++||+++|++.+ ||.+|.|++++..+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~--------------------G~~~D~G~~~~~~~~ 61 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ--------------------GFTFDAGPTVITDPS 61 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET--------------------TEEEECSCCCBSCTH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC--------------------CEEEecCceeecCch
Confidence 579999999999999999999999999999999999999999754 899999999998776
Q ss_pred HHHHHHHHcC--CcceeEEEEeCceE--EEeCCeEEEecCChHHHhccCCCC--hHHHHHHHHHHHHHhhcccCC-----
Q 013352 85 ALVRVLIHTD--VTKYLYFKAVDGSF--VYNKGKVHKVPATDMEALKSPLMG--IFEKRRARKFFIYVQDYDEND----- 153 (444)
Q Consensus 85 ~l~~~l~~~~--~~~~l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~~~~--~~ek~~~~~f~~~~~~~~~~~----- 153 (444)
.+.+++...+ +.+++++...+..| .+.+|+...++.+. +.+...+.. ..+...+.+|+..++......
T Consensus 62 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (501)
T 4dgk_A 62 AIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQ-TRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLG 140 (501)
T ss_dssp HHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCH-HHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--C
T ss_pred hHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccH-HHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhcc
Confidence 5555555544 56778888887765 45688888888773 322221111 123445667766665432211
Q ss_pred --Ccc-ccc-----ccCC----CCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCC
Q 013352 154 --PKT-HEG-----MDLT----RVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGG 221 (444)
Q Consensus 154 --~~~-~~~-----~~~~----~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~ 221 (444)
|.. ... ..+. ..++.+++.++--++.++.++.. .++.........++...+ +..+. ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~g~~p~~~~~~~~~------~~~~~---~~ 210 (501)
T 4dgk_A 141 TVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSF-HSLLVGGNPFATSSIYTL------IHALE---RE 210 (501)
T ss_dssp CCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHH-HHHHHHSCC--CCCTHHH------HHHHH---SC
T ss_pred ccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhh-hhcccCCCcchhhhhhhh------hhhhh---cc
Confidence 000 000 0000 12455666666445666655432 222111111112222111 11111 12
Q ss_pred CcEEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC---Ccccccc--
Q 013352 222 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL---PNKVRKV-- 295 (444)
Q Consensus 222 ~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~---~~~~~~~-- 295 (444)
...+||+||+++|+++|++.+++.|++|++|++|++|.. +++++++|++ +|+++.||.||++.+.. ..+++..
T Consensus 211 ~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~ 289 (501)
T 4dgk_A 211 WGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPA 289 (501)
T ss_dssp CCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--------------
T ss_pred CCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccccc
Confidence 236799999999999999999999999999999999999 7899999998 89999999999875432 1222110
Q ss_pred -----ce-----eEEEEEE----ecCCCCCCCCCCeEEEEeCC------------CccCCCCcEEEEEeC-CCcccccCC
Q 013352 296 -----GR-----VARAIAI----MSHPIPNTNDSHSVQVILPQ------------KQLGRRSDMYLFCCS-YSHNVAPKG 348 (444)
Q Consensus 296 -----~~-----~~r~i~i----~~~~l~~~~~~~~~~i~~p~------------~~~~~~~~i~~~~~s-~~~~~~P~G 348 (444)
.+ ...+.+. ++.+.... .++.+++.+ .....++.+|++..| .|+..+|+|
T Consensus 290 ~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G 366 (501)
T 4dgk_A 290 AVKQSNKLQTKRMSNSLFVLYFGLNHHHDQL---AHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEG 366 (501)
T ss_dssp -------------CCEEEEEEEEESSCCTTS---CSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTT
T ss_pred chhhhhhhhccccCCceeEEEecccCCcccc---ccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCC
Confidence 00 1111111 33333221 234444422 112234568888877 578999999
Q ss_pred cEEEEEEeecC
Q 013352 349 KFIAFVSTEAE 359 (444)
Q Consensus 349 ~~~~~~st~~~ 359 (444)
+..+++.+.++
T Consensus 367 ~~~~~~~~~~p 377 (501)
T 4dgk_A 367 CGSYYVLAPVP 377 (501)
T ss_dssp CEEEEEEEEEC
T ss_pred CceEEEEEecC
Confidence 99998888764
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.95 E-value=4.2e-26 Score=228.50 Aligned_cols=369 Identities=16% Similarity=0.192 Sum_probs=221.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC-
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~- 83 (444)
+||||||||++||+||++|+++|++|+||||++++||+++++..+ +|.+|.||..+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~--------------------G~~~d~G~~~~~~~~ 60 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYK--------------------GFQLSSGAFHMLPNG 60 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEET--------------------TEEEESSSCSCBTTG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccC--------------------CcEEcCCCceEecCC
Confidence 489999999999999999999999999999999999999998754 89999998766532
Q ss_pred --hHHHHHHHHcCCcceeEEEEeCceEEEe--C--------CeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhccc
Q 013352 84 --GALVRVLIHTDVTKYLYFKAVDGSFVYN--K--------GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (444)
Q Consensus 84 --~~l~~~l~~~~~~~~l~~~~~~~~~~~~--~--------g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~ 151 (444)
..+.+++.+.++...+.... .....+. + ++.+.++.. ...++..++..+...+..+..
T Consensus 61 ~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 130 (425)
T 3ka7_A 61 PGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFNDF------PSLLSYKDRMKIALLIVSTRK--- 130 (425)
T ss_dssp GGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGGG------GGGSCHHHHHHHHHHHHHTTT---
T ss_pred CccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhhh------hhhCCHHHHHHHHHHHHhhhh---
Confidence 24566677777754332221 1112221 1 444444321 123444555444433322111
Q ss_pred CCCcccccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCc
Q 013352 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGL 231 (444)
Q Consensus 152 ~~~~~~~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~ 231 (444)
. .....++.+|++++.-.+.+..++..........+....++...+..+..+ ..+ |. ..+|.+|+
T Consensus 131 ~--------~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~-~~--~~~~~gG~ 195 (425)
T 3ka7_A 131 N--------RPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM----YRF-GG--TGIPEGGC 195 (425)
T ss_dssp S--------CCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHH-CS--CEEETTSH
T ss_pred c--------CCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH----Hhc-CC--ccccCCCH
Confidence 0 114689999999874444455555433322111222223444444333322 122 22 46899999
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC--Ccccc--------c-----cc
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL--PNKVR--------K-----VG 296 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~--~~~~~--------~-----~~ 296 (444)
+.++++|++.+.+.|++|+++++|++|.. +++++++|+++|+++.||.||++.+.. ..+++ . ..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~ 274 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVG 274 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhh
Confidence 99999999999999999999999999998 578888898899999999999764431 11211 0 00
Q ss_pred --eeEEE---EEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEeecCCCC---ccccc
Q 013352 297 --RVARA---IAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVSTEAETDH---PQTEL 367 (444)
Q Consensus 297 --~~~r~---i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st~~~~~~---~~~~l 367 (444)
+.... .+.++.+.. .+..++++... .....+...| .++..+|+|+.++++.......+ .++++
T Consensus 275 ~~~~~~~~~v~l~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~ 346 (425)
T 3ka7_A 275 TLQPSAGIKICLAADEPLV-----GHTGVLLTPYT---RRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEI 346 (425)
T ss_dssp HCCCBEEEEEEEEESSCSS-----CSSSEEECCSS---SSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHH
T ss_pred CcCCCceEEEEeecCCCcc-----CcCEEEECCCh---hhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHH
Confidence 11111 122444432 23455565432 1122344444 57889999999987765532111 12444
Q ss_pred HhHHhhcC---C-ccceee---eeee---ccccCCC-----CCC-CCEEEccCCCCC---CccHHHHHHHHHHHHHhcC
Q 013352 368 KPGIDLLG---P-VDEIFY---DIYD---RYEPVNE-----PSL-DNCFISTSYDAT---THFESTVTDVLNMYTMITG 427 (444)
Q Consensus 368 ~~~~~~l~---~-~~~~~~---~~~~---~~~~~~~-----~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 427 (444)
+.+++.|. | ...... .+.. .|.+... ..| +|+|+|+++-.. ...+.|+..++.+-++|.|
T Consensus 347 ~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 347 EMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 44444332 2 111111 1221 2222111 133 799999877655 7889999999999998875
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=8.2e-26 Score=226.31 Aligned_cols=364 Identities=13% Similarity=0.171 Sum_probs=225.3
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC--
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN-- 83 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~-- 83 (444)
||||||||++||+||++|+++|++|+|+||++++||+++++..+ +|.+|.||++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~--------------------g~~~d~G~~~~~~~~~ 61 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYK--------------------GFQLSTGALHMIPHGE 61 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEET--------------------TEEEESSSCSEETTTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccC--------------------CEEEecCCeEEEccCC
Confidence 89999999999999999999999999999999999999998754 89999999776542
Q ss_pred -hHHHHHHHHcCCcceeEEEEeCc-eEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccccc
Q 013352 84 -GALVRVLIHTDVTKYLYFKAVDG-SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMD 161 (444)
Q Consensus 84 -~~l~~~l~~~~~~~~l~~~~~~~-~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~~~ 161 (444)
..+.+++.+.++. .++...+. ..++.+|+.+.+|.. .. .++..++..+.+++...... ...
T Consensus 62 ~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~-~~-----~l~~~~~~~~~~~~~~~~~~---------~~~ 124 (421)
T 3nrn_A 62 DGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRES-WK-----FLSVKEKAKALKLLAEIRMN---------KLP 124 (421)
T ss_dssp SSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGG-GG-----GCC--------CCHHHHHTT---------CCC
T ss_pred ChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCc-hh-----hCCHhHHHHHHHHHHHHHhc---------cCC
Confidence 3566666667764 33444332 234448888887754 11 23334444444444333221 111
Q ss_pred CCCCcHHHHHHHcCCChh-HHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHHHHHH
Q 013352 162 LTRVTTRELIAKYGLDDN-TIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFAR 240 (444)
Q Consensus 162 ~~~~s~~e~~~~~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~al~r 240 (444)
....++.+|++++++... +..++.+........+....++...+..+..+. .+ + .+.+|++|++.++++|++
T Consensus 125 ~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~--g~~~~~gG~~~l~~~l~~ 197 (421)
T 3nrn_A 125 KEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL----RW-G--GPGLIRGGCKAVIDELER 197 (421)
T ss_dssp CCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HH-C--SCEEETTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHh----hc-C--CcceecCCHHHHHHHHHH
Confidence 235889999998855544 455554433221122222335544544443322 22 2 246899999999999999
Q ss_pred HHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC--Ccccc-c---------ccee--EEE---EE
Q 013352 241 LSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL--PNKVR-K---------VGRV--ARA---IA 303 (444)
Q Consensus 241 ~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~--~~~~~-~---------~~~~--~r~---i~ 303 (444)
.++..|++|++|++|++|.. +++++ |.++|+++.||.||++.+.. .++++ . ..++ ... .+
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~-~~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l 274 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINI-EEKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNL 274 (421)
T ss_dssp HHHTTTCEEESSCCEEEEET-TTTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEE
T ss_pred HHHHCCCEEEcCCeEEEEEE-ECCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEE
Confidence 99999999999999999987 56665 76788899999999764431 12221 0 0111 111 12
Q ss_pred EecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCc--c-c
Q 013352 304 IMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPV--D-E 379 (444)
Q Consensus 304 i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~--~-~ 379 (444)
.++.+. . ..+.+++++..- -. .+...| .++..+|+|+.+++++..++..+++++++.+++.|..+ . +
T Consensus 275 ~~~~~~--~---~~~~~~~~~~~~--~~--~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~ 345 (421)
T 3nrn_A 275 AVPGEP--R---IGNTIVFTPGLM--IN--GFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGE 345 (421)
T ss_dssp EEESSC--S---SCSSEEECTTSS--SC--EEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTTCE
T ss_pred EEcCCc--c---cCCeEEEcCCcc--ee--eEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCCCe
Confidence 234431 1 123344543321 12 234444 57889999999999998876666556666666655321 1 1
Q ss_pred -eee-eeee---ccccC--CC--CCCCCEEEccCCCCCC-cc--HHHHHHHHHHHHHh
Q 013352 380 -IFY-DIYD---RYEPV--NE--PSLDNCFISTSYDATT-HF--ESTVTDVLNMYTMI 425 (444)
Q Consensus 380 -~~~-~~~~---~~~~~--~~--~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 425 (444)
..+ .+.. .|.+. .+ ..++|+|+|+++-... .+ |.|+..++.+-++|
T Consensus 346 ~~~~~~~~~~~p~~~~~~~~~~~~~~~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 346 PLLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp EEEEEEC-------------CCCCCCSSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEeeeccCCCCcccccCCCCCCCCCCcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 111 1111 12110 00 1228999999887777 56 99999999999998
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=4.5e-22 Score=202.37 Aligned_cols=384 Identities=12% Similarity=0.081 Sum_probs=222.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
..+||||||||++||+||+.|+++|++|+|+|+++++||+++|++.+ ++.+|.|++++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~--------------------g~~~~~g~~~~~~ 74 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA--------------------GYLVEQGPNSFLD 74 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET--------------------TEEEESSCCCEET
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC--------------------CeeeecChhhhhh
Confidence 35899999999999999999999999999999999999999999754 7999999999987
Q ss_pred Ch-HHHHHHHHcCCcceeEEEE--eCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccc
Q 013352 83 NG-ALVRVLIHTDVTKYLYFKA--VDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 83 ~~-~l~~~l~~~~~~~~l~~~~--~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
.+ .+.+++.+.++...+.+.. ....+++.+|+.+.+|.+..+.+...++++.++.. .+..+.... .
T Consensus 75 ~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~---- 143 (478)
T 2ivd_A 75 REPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLR------VAGELFSRR-A---- 143 (478)
T ss_dssp TCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHH------HHGGGGCCC-C----
T ss_pred hhHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHH------HhhhhhcCC-C----
Confidence 54 5566777788876554332 12356677899889998865555555555444322 222221111 0
Q ss_pred ccCCCCcHHHHHHHcCCChhH-HHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHH-------hh--------c---ccC
Q 013352 160 MDLTRVTTRELIAKYGLDDNT-IDFIGHALALHRDDRYLNEPALDTVKRMKLYAES-------IA--------R---FQG 220 (444)
Q Consensus 160 ~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s-------~~--------~---~~G 220 (444)
......|+.+|+++. +.+.. ..++.+........+....++...+..+..+... +. . ...
T Consensus 144 ~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (478)
T 2ivd_A 144 PEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGT 222 (478)
T ss_dssp CTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CC
T ss_pred CCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccc
Confidence 023578999999886 55554 3444433322111222222333333332222111 00 0 001
Q ss_pred C----CcEEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCeEEEcCEEEeCCCC--C--
Q 013352 221 G----SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSY--L-- 288 (444)
Q Consensus 221 ~----~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~~i~ad~VI~~~~~--~-- 288 (444)
. ..+.+|++|++.|+++|++.+ |++|+++++|++|.. ++++ +.|++ +|+++.||+||++.+. +
T Consensus 223 ~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~-~~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ 297 (478)
T 2ivd_A 223 APKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAR-EDGG-WRLIIEEHGRRAELSVAQVVLAAPAHATAK 297 (478)
T ss_dssp SCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEEC-C--C-CEEEEEETTEEEEEECSEEEECSCHHHHHH
T ss_pred cccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEe-cCCe-EEEEEeecCCCceEEcCEEEECCCHHHHHH
Confidence 2 568899999999999998765 679999999999987 4444 45554 6778999999976432 1
Q ss_pred --Cccc-------ccc--ceeEEEEEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEe
Q 013352 289 --PNKV-------RKV--GRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVST 356 (444)
Q Consensus 289 --~~~~-------~~~--~~~~r~i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st 356 (444)
|.+. ... .......+.++.+.-.. +....+++|..+. .....+...+ ..+..+|+|+.++.+..
T Consensus 298 ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 373 (478)
T 2ivd_A 298 LLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPA--PDGFGFLVPAEEQ--RRMLGAIHASTTFPFRAEGGRVLYSCMV 373 (478)
T ss_dssp HHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCC--CCSSEEECCGGGC--CSCCEEEEHHHHCGGGBSTTCEEEEEEE
T ss_pred HhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCC--CCceEEEecCCCC--CceEEEEEEcccCCCcCCCCCEEEEEEe
Confidence 2110 011 12223233345543111 1223345554321 1122223222 24556788987655444
Q ss_pred ecCCC-----Cccccc-HhHH---h-hcCCccc----eeeeeee---ccccCCC----------CCCCCEEEccCCCCCC
Q 013352 357 EAETD-----HPQTEL-KPGI---D-LLGPVDE----IFYDIYD---RYEPVNE----------PSLDNCFISTSYDATT 409 (444)
Q Consensus 357 ~~~~~-----~~~~~l-~~~~---~-~l~~~~~----~~~~~~~---~~~~~~~----------~~~~~~~~~~~~~~~~ 409 (444)
..... .+++++ +.++ . +++...+ ....+.. .|.+-.. ...+|+|+++.+-...
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~ 453 (478)
T 2ivd_A 374 GGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGV 453 (478)
T ss_dssp ECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCC
T ss_pred CCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCC
Confidence 33211 122222 2222 2 3332111 1112221 1221100 0037999998875555
Q ss_pred ccHHHHHHHHHHHHHhcC
Q 013352 410 HFESTVTDVLNMYTMITG 427 (444)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~ 427 (444)
..++|+..++.+-++|.+
T Consensus 454 gv~gA~~SG~~aA~~i~~ 471 (478)
T 2ivd_A 454 GLNDCIRNAAQLADALVA 471 (478)
T ss_dssp SHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 689999999999999964
No 9
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.91 E-value=3.8e-22 Score=202.76 Aligned_cols=384 Identities=13% Similarity=0.074 Sum_probs=217.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
+||+|||||++||+||++|+++|+ +|+|||+++++||++++.... .++.+|.|++.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~-------------------~g~~~d~G~~~~~~ 63 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP-------------------NGAIFELGPRGIRP 63 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT-------------------TSCEEESSCCCBCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc-------------------CCeEEEeCCCcccC
Confidence 699999999999999999999999 999999999999999997532 27999999999876
Q ss_pred Ch----HHHHHHHHcCCcceeEEEEe-----CceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCC
Q 013352 83 NG----ALVRVLIHTDVTKYLYFKAV-----DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEND 153 (444)
Q Consensus 83 ~~----~l~~~l~~~~~~~~l~~~~~-----~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~ 153 (444)
.+ .+.+++.+.++...+..... ...+++.+|+++.+|.+....+.. + ..+.+... ...+..+..
T Consensus 64 ~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~-- 136 (477)
T 3nks_A 64 AGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRP-S-PPFSKPLF---WAGLRELTK-- 136 (477)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---C-C-TTSCSCSS---HHHHTTTTS--
T ss_pred CCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccc-c-chhhhHHH---HHHHHhhhc--
Confidence 42 35566677788755443321 125678899999998763222221 0 11110011 111122211
Q ss_pred CcccccccCCCCcHHHHHHHcCCChhHH-HHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhh---------------
Q 013352 154 PKTHEGMDLTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIA--------------- 216 (444)
Q Consensus 154 ~~~~~~~~~~~~s~~e~~~~~~l~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~--------------- 216 (444)
+. . ...+.++.+|+++. +...+. .++.+.. .++.. +....+....+..+.......+
T Consensus 137 ~~--~--~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~-~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~ 210 (477)
T 3nks_A 137 PR--G--KEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAG-NSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ 210 (477)
T ss_dssp CC--C--CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSS-CTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----C
T ss_pred CC--C--CCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccC-CHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccC
Confidence 11 0 12467999999874 444443 3333332 22221 2222233333332222111110
Q ss_pred ---------cccCCCcEEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 013352 217 ---------RFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (444)
Q Consensus 217 ---------~~~G~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~ 287 (444)
.. ....++++++|++.|+++|++.+...|++|++|++|++|.. ++++++.|+++++++.||+||++.+.
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~-~~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 211 PDSALIRQALA-ERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSL-QAEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp CCCHHHHHHHH-TTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE-CGGGCEEEECSSCEEEESEEEECSCH
T ss_pred Cchhhhhhhcc-cCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-cCCceEEEEECCeEEEcCEEEECCCH
Confidence 01 12357899999999999999999999999999999999998 44454567777778999999976432
Q ss_pred -C-Ccccc----c-------cc--eeEEEEEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEe-C-CCcccc-cCCc
Q 013352 288 -L-PNKVR----K-------VG--RVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCC-S-YSHNVA-PKGK 349 (444)
Q Consensus 288 -~-~~~~~----~-------~~--~~~r~i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~-s-~~~~~~-P~G~ 349 (444)
. ..+++ . .. .+......++.+.... .....++|..+- ..+.-... | ..+... |+|.
T Consensus 289 ~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~---~~~g~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~ 362 (477)
T 3nks_A 289 SVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV---QGFGHLVPSSED---PGVLGIVYDSVAFPEQDGSPPG 362 (477)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSS---CSSEEECCTTTC---SSEEEEECHHHHCGGGSTTTTC
T ss_pred HHHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCCCCCC---CCceEEccCCCC---CCceEEEEeccccCCCCCCCCc
Confidence 1 11111 1 11 1111122234443211 223455665431 12222221 1 122222 3477
Q ss_pred EEEEEEeecC---------CCCcccc-cHhHHh----hcCCcc-ceeee---eee---ccccCC--------C---CCCC
Q 013352 350 FIAFVSTEAE---------TDHPQTE-LKPGID----LLGPVD-EIFYD---IYD---RYEPVN--------E---PSLD 397 (444)
Q Consensus 350 ~~~~~st~~~---------~~~~~~~-l~~~~~----~l~~~~-~~~~~---~~~---~~~~~~--------~---~~~~ 397 (444)
.++.+....+ ...++++ ++.+++ +|+... ..+.. +.. .|.+-- . ....
T Consensus 363 ~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~ 442 (477)
T 3nks_A 363 LRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRL 442 (477)
T ss_dssp EEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCC
Confidence 7765544321 0112333 333333 344211 11211 211 222110 0 1236
Q ss_pred CEEEccCCCCCCccHHHHHHHHHHHHHhcCC
Q 013352 398 NCFISTSYDATTHFESTVTDVLNMYTMITGK 428 (444)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (444)
++++++++..+...++|+.+++.+-++|.++
T Consensus 443 ~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 443 PLTLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp SEEECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 8999998777878899999999999999764
No 10
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.90 E-value=3.2e-22 Score=202.74 Aligned_cols=385 Identities=11% Similarity=0.125 Sum_probs=210.0
Q ss_pred CCC-cccEEEECCCchHHHHHhhhhcCC------CeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEE
Q 013352 1 MDE-EYDVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV 73 (444)
Q Consensus 1 M~~-~~DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (444)
|.. ++||||||||++||+||++|+++| ++|+|||+++++||+++|...+ ++.+
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~--------------------g~~~ 60 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKD--------------------GYII 60 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCT--------------------TCCE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccC--------------------CEEe
Confidence 543 589999999999999999999999 9999999999999999998643 7999
Q ss_pred ecccceeecCh-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCCh--------HHHhccCCCChHHHHHHHHHHH
Q 013352 74 DMIPKFIIANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATD--------MEALKSPLMGIFEKRRARKFFI 144 (444)
Q Consensus 74 dlgp~~l~~~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~--------~~~~~~~~~~~~ek~~~~~f~~ 144 (444)
|.|++++.... .+.+++.+.|+...+........+++.+|+++.+|... ...+...+++..++. .....
T Consensus 61 d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~ 138 (470)
T 3i6d_A 61 ERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKA--RAAMD 138 (470)
T ss_dssp ESSCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSH--HHHHH
T ss_pred ccChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHH--HHhcC
Confidence 99998887553 56677777888766553323445677788887776532 111222222222211 11111
Q ss_pred HHhhcccCCCcccccccCCCCcHHHHHHHcCCChhH-HHHHHHHh-hcccCCCCCCCchHHHHHHHHHH-------HHHh
Q 013352 145 YVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLY-------AESI 215 (444)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-------~~s~ 215 (444)
... +. .......++.+|+++. +.... ..++.+.. .++.. +....++...+..+..+ ...+
T Consensus 139 ~~~------~~---~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 207 (470)
T 3i6d_A 139 FIL------PA---SKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAG-DIDKLSLMSTFPQFYQTEQKHRSLILGM 207 (470)
T ss_dssp HHS------CC---CSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCS-CTTTBBHHHHCGGGCC------------
T ss_pred ccc------CC---CCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecC-CHHHhhHHHHHHHHHHHHHhcCcHHHHH
Confidence 111 00 0122578999999876 55544 33433333 22221 11111222111111000 0000
Q ss_pred hc-----------ccCCCcEEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEe
Q 013352 216 AR-----------FQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVC 283 (444)
Q Consensus 216 ~~-----------~~G~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~ 283 (444)
.. ......+.++++|++.|+++|++.+.. ++|+++++|++|.. +++++ .|++ +|+++.||+||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~-~~~~~-~v~~~~g~~~~ad~vi~ 283 (470)
T 3i6d_A 208 KKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSH-SGSCY-SLELDNGVTLDADSVIV 283 (470)
T ss_dssp -------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEE-CSSSE-EEEESSSCEEEESEEEE
T ss_pred HhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEE-cCCeE-EEEECCCCEEECCEEEE
Confidence 00 000236788999999999999875533 79999999999998 45554 4666 787899999997
Q ss_pred CCC-CC-Ccccc---------cc--ceeEEEEEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEE-eC-CCcccccCC
Q 013352 284 DPS-YL-PNKVR---------KV--GRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFC-CS-YSHNVAPKG 348 (444)
Q Consensus 284 ~~~-~~-~~~~~---------~~--~~~~r~i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~-~s-~~~~~~P~G 348 (444)
+.+ .. ..++. .. ..+....+.++.+.-.. .......++|..+. ..++-.. .| ..+..+|.|
T Consensus 284 a~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~g~l~~~~~~---~~~~~~~~~s~~~~~~~p~~ 359 (470)
T 3i6d_A 284 TAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSVQM-EHEGTGFVISRNSD---FAITACTWTNKKWPHAAPEG 359 (470)
T ss_dssp CSCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESSTTCCC-SSCSSEEEECSTTC---CSEEEEEEHHHHCGGGSCTT
T ss_pred CCCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECchhcCC-CCCCeEEEccCCCC---CCceEEEEEcCcCCCcCCCC
Confidence 633 21 11111 11 12222223344443211 12334566665431 1232222 12 134567889
Q ss_pred cEEEEEEeecCC-----CCcccc-cHhHHhhc----CCcc-ceee---eeee---ccccCC--------C---CCCCCEE
Q 013352 349 KFIAFVSTEAET-----DHPQTE-LKPGIDLL----GPVD-EIFY---DIYD---RYEPVN--------E---PSLDNCF 400 (444)
Q Consensus 349 ~~~~~~st~~~~-----~~~~~~-l~~~~~~l----~~~~-~~~~---~~~~---~~~~~~--------~---~~~~~~~ 400 (444)
..++.+....+. ..++++ ++.+++.| +... ..+. .|.. .|.+-. . ....|||
T Consensus 360 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~ 439 (470)
T 3i6d_A 360 KTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVY 439 (470)
T ss_dssp CEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEE
T ss_pred CEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEE
Confidence 887655543221 122333 33333333 3211 1111 1221 222110 0 0126899
Q ss_pred EccCCCCCCccHHHHHHHHHHHHHhc
Q 013352 401 ISTSYDATTHFESTVTDVLNMYTMIT 426 (444)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
+++++-.....++|+..++++-++|.
T Consensus 440 ~aG~~~~g~gv~~a~~sG~~aA~~i~ 465 (470)
T 3i6d_A 440 MTGASFEGVGIPDCIDQGKAAVSDAL 465 (470)
T ss_dssp ECSTTTSCCSHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCHHHHHHHHHHHHHHHH
Confidence 99986667789999999999988875
No 11
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.90 E-value=9.4e-23 Score=209.09 Aligned_cols=245 Identities=16% Similarity=0.125 Sum_probs=146.5
Q ss_pred cccEEEECCCchHHHHHhhhhc-CCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 4 EYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
.+||||||||++||+||++|++ .|++|+|||+++++||+++|+.. ..||.+|.|||+++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~-------------------~~G~~~D~G~h~~~~ 70 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVT-------------------PEGFLYDVGGHVIFS 70 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEEC-------------------TTSCEEESSCCCCCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEe-------------------cCCEEEEeCceEecC
Confidence 5899999999999999999997 59999999999999999998642 128999999999987
Q ss_pred ChH-HHHHHHHcCCcceeEEEEe-CceEEEeCCeEEEecCChHHHhccCCCChHHH-HHHHHHHHHHhhcccCCCccccc
Q 013352 83 NGA-LVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEK-RRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 83 ~~~-l~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek-~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
..+ +.+++.+.+.... ++... ...+++.+|+++..|... .+.. +..... +....++....... .+
T Consensus 71 ~~~~v~~l~~e~~~~~~-~~~~~~~~~~i~~~g~~~~~p~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~--~~----- 138 (513)
T 4gde_A 71 HYKYFDDCLDEALPKED-DWYTHQRISYVRCQGQWVPYPFQN--NISM--LPKEEQVKCIDGMIDAALEAR--VA----- 138 (513)
T ss_dssp CBHHHHHHHHHHSCSGG-GEEEEECCEEEEETTEEEESSGGG--GGGG--SCHHHHHHHHHHHHHHHHHHH--TC-----
T ss_pred CCHHHHHHHHHhCCccc-eeEEecCceEEEECCeEeecchhh--hhhh--cchhhHHHHHHHHHHHHHhhh--cc-----
Confidence 654 4455555544321 23322 345677899998888541 1111 111111 11222222211110 00
Q ss_pred ccCCCCcHHHHHHHcCCChhHH-HHHHHHh-hcccC----------CCCCCCchHHHHHHHHHHHHH--hhcccCCCcEE
Q 013352 160 MDLTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRD----------DRYLNEPALDTVKRMKLYAES--IARFQGGSPYI 225 (444)
Q Consensus 160 ~~~~~~s~~e~~~~~~l~~~~~-~~~~~~~-~l~~~----------~~~~~~~~~~~~~~~~~~~~s--~~~~~G~~~~~ 225 (444)
.....++.+|+.+. +.+.+. .++.+.. .++.. ...+..+.... .+...+.. ...+.....+.
T Consensus 139 -~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 214 (513)
T 4gde_A 139 -NTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKA--VTTNVILGKTAGNWGPNATFR 214 (513)
T ss_dssp -CSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHH--HHHHHHHTCCCCSCBTTBEEE
T ss_pred -cccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhh--hhhhhhhccccccccccccee
Confidence 11346788877554 333332 2222221 11110 01111111111 11111110 01110133455
Q ss_pred Ee-CCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 226 YP-LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 226 ~p-~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
+| ++|++.|+++|++.+...|+++++|++|++|.. +++++ +..+|+++.||+||++.+
T Consensus 215 ~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~-~~~~v--~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 215 FPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNA-NNKTV--TLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp EESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEET-TTTEE--EETTSCEEEEEEEEECSC
T ss_pred ecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEc-cCCEE--EEcCCCEEECCEEEECCC
Confidence 55 799999999999999999999999999999987 45542 334899999999998744
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.90 E-value=3.6e-21 Score=195.58 Aligned_cols=384 Identities=11% Similarity=0.120 Sum_probs=220.7
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC--CeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
+++||+|||||++||++|++|+++| ++|+|+|+++++||+++|.... ++.+|.|++++
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~~ 62 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRED--------------------GFTIERGPDSY 62 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECST--------------------TCCEESSCCCE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeC--------------------CEEEecCchhh
Confidence 3689999999999999999999999 9999999999999999998643 79999999988
Q ss_pred ecCh-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCC--------hHHHhccCCCChHHHHHHHHHHHHHhhccc
Q 013352 81 IANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPAT--------DMEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (444)
Q Consensus 81 ~~~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~--------~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~ 151 (444)
.... .+.+++.+.++...+........+++.+|+++.+|.. ....+...+++..++. .+.........
T Consensus 63 ~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 139 (475)
T 3lov_A 63 VARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ---EVADLLLHPSD 139 (475)
T ss_dssp ETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH---HHHHHHHSCCT
T ss_pred hcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH---HhhCcccCCcc
Confidence 7654 5666777788876655332344667778888887653 2444556666666543 22222221110
Q ss_pred CCCcccccccCCCCcHHHHHHHcCCChhH-HHHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhh-------cc----
Q 013352 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIA-------RF---- 218 (444)
Q Consensus 152 ~~~~~~~~~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~-------~~---- 218 (444)
+ ........++.+|+++. +.... ..++.+.. .++.. +....++...+..+..+....+ ..
T Consensus 140 --~---~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 212 (475)
T 3lov_A 140 --S---LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAG-NIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLD 212 (475)
T ss_dssp --T---CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCC-CTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--
T ss_pred --c---ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecC-ChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccc
Confidence 0 00122568999999875 44444 34444333 23221 1111122211112211111110 00
Q ss_pred ----------cCCCcEEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC-
Q 013352 219 ----------QGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS- 286 (444)
Q Consensus 219 ----------~G~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~- 286 (444)
.....+.++++|++.|+++|++.+.. ++|++|++|++|.. +++++ .|++ +| ++.||+||++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~-~~~~~-~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 213 QLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISR-EDGRY-RLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp ------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEE-ETTEE-EEECTTC-CEEESEEEECSCH
T ss_pred cccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEE-eCCEE-EEEECCC-eEECCEEEECCCH
Confidence 01346889999999999999876543 79999999999987 45544 4666 66 899999997633
Q ss_pred CC-Ccccc--------cc--ceeEEEEEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEe-C-CCcccccCCcEEEE
Q 013352 287 YL-PNKVR--------KV--GRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCC-S-YSHNVAPKGKFIAF 353 (444)
Q Consensus 287 ~~-~~~~~--------~~--~~~~r~i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~-s-~~~~~~P~G~~~~~ 353 (444)
.. ..++. .. ..+....+.++.+. . .......+++|..+. ..++-... | ..+...|. ..++.
T Consensus 288 ~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~-~-~~~~g~g~l~~~~~~---~~~~~~~~~s~~~~~~~p~-~~~l~ 361 (475)
T 3lov_A 288 PQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQ-S-LPIEGTGFVVNRRAP---YSITACTAIDQKWNHSAPD-HTVLR 361 (475)
T ss_dssp HHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCS-S-CSSSSSEEEECTTSS---CSEEEEEEHHHHCTTTCTT-EEEEE
T ss_pred HHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcC-C-CCCCCEEEEecCCCC---CceEEEEEEcccCCCCCCC-cEEEE
Confidence 21 11111 11 12222233355554 1 112334556665431 22332222 2 12345565 44444
Q ss_pred EEeecCC------CCcccccHhHHhh----cCCc-cceee---eeee---ccccCC--------C---CCCCCEEEccCC
Q 013352 354 VSTEAET------DHPQTELKPGIDL----LGPV-DEIFY---DIYD---RYEPVN--------E---PSLDNCFISTSY 405 (444)
Q Consensus 354 ~st~~~~------~~~~~~l~~~~~~----l~~~-~~~~~---~~~~---~~~~~~--------~---~~~~~~~~~~~~ 405 (444)
+....+. .++++.++.+++. ++.. ...+. .+.. .|.+-. . ...+|+|+++++
T Consensus 362 ~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~ 441 (475)
T 3lov_A 362 AFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLA 441 (475)
T ss_dssp EEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTT
T ss_pred EEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccC
Confidence 3332211 1222223333333 3321 11111 1221 232210 0 012689999976
Q ss_pred CCCCccHHHHHHHHHHHHHhcC
Q 013352 406 DATTHFESTVTDVLNMYTMITG 427 (444)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~ 427 (444)
......++|+..++.+-++|..
T Consensus 442 ~~g~g~~~a~~sG~~aA~~i~~ 463 (475)
T 3lov_A 442 YDGVGLPDCVASAKTMIESIEL 463 (475)
T ss_dssp TSCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 6677799999999999999974
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.89 E-value=3.8e-21 Score=196.87 Aligned_cols=394 Identities=12% Similarity=0.101 Sum_probs=217.0
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
|.+.+||+|||||++||+||+.|+++|++|+|+|+++++||+++++..+ ++.+|.|++++
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~~ 69 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQD--------------------GLIWDEGANTM 69 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEET--------------------TEEEESSCCCB
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccC--------------------CeEEecCCccc
Confidence 4456899999999999999999999999999999999999999998753 79999999998
Q ss_pred ecC-hHHHHHHHHcCCcceeEEEEe-CceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCcccc
Q 013352 81 IAN-GALVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHE 158 (444)
Q Consensus 81 ~~~-~~l~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~ 158 (444)
... ..+.+++.+.|+...+.+... ...+++.+|+.+.+|.+....+...+++..++... +........ ..+. .
T Consensus 70 ~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~--~ 144 (504)
T 1sez_A 70 TESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQM--LLEPILWKN-KKLS--Q 144 (504)
T ss_dssp CCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHH--HTHHHHC----------
T ss_pred ccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHH--hHhhhccCc-cccc--c
Confidence 765 356677777898776555432 23456778888889887555555555555443221 111111100 0000 0
Q ss_pred cccCCCCcHHHHHHHcCCChhH-HHHHHHHh-hcccCCCCCCCchHHHHHHHHHH-----------HHH-hhcccC----
Q 013352 159 GMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLY-----------AES-IARFQG---- 220 (444)
Q Consensus 159 ~~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-----------~~s-~~~~~G---- 220 (444)
......|+.+|++++ +.+.. ..++.+.. .++.. +....++...+..+... +.. +....+
T Consensus 145 -~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (504)
T 1sez_A 145 -VSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGG-DPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQG 221 (504)
T ss_dssp ----CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSC-CGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--------
T ss_pred -cCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCC-ChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccccc
Confidence 012458999999876 55554 33443332 22221 11112222222111111 100 111000
Q ss_pred ----------CCcEEEeCCCcchHHHHHHHHHHHcC-cEEEcCCcceeEEEcCCCc----EEEEEe---CC---eEEEcC
Q 013352 221 ----------GSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGK----VVGVTS---EG---ETAKCK 279 (444)
Q Consensus 221 ----------~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~g~----v~gV~~---~g---~~i~ad 279 (444)
...+.++++|++.|+++|++ ..| ++|++|++|++|..++++. .+.|++ +| +++.||
T Consensus 222 ~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad 298 (504)
T 1sez_A 222 PPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD 298 (504)
T ss_dssp --CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEES
T ss_pred ccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECC
Confidence 12367889999999999986 345 7899999999999743331 244544 35 578999
Q ss_pred EEEeCCCC--CCccc-------------cccc--eeEEEEEEecCCCCCCCCCCeEEEEeCCCccCCCCcEE-EEEeC-C
Q 013352 280 KVVCDPSY--LPNKV-------------RKVG--RVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMY-LFCCS-Y 340 (444)
Q Consensus 280 ~VI~~~~~--~~~~~-------------~~~~--~~~r~i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~-~~~~s-~ 340 (444)
+||++.+. +..++ +... .+....+.++.+.-. .....+++++|..+....-.++ +...| .
T Consensus 299 ~VI~a~p~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~ 377 (504)
T 1sez_A 299 AVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVK-YPLEGFGVLVPSKEQQHGLKTLGTLFSSMM 377 (504)
T ss_dssp EEEECSCHHHHHTSEEESSSSBCCCTTSCCCCEEEEEEEEEEEEGGGBS-SCCCSSEEECCGGGGGGTCCSSEEEEHHHH
T ss_pred EEEECCCHHHHHHHhhcccCCcccHHHHhcCCCCceEEEEEEEchhhcC-CCCCceEEEcCCCCCCCCCccceEEeeccc
Confidence 99987432 11111 1111 111112223433211 1113457778754311000111 11122 2
Q ss_pred CcccccCCcEEEEEEeecCC-----CCcccc-cHhHHhh----cCCcc-ceee---eeee---ccccCC--------C--
Q 013352 341 SHNVAPKGKFIAFVSTEAET-----DHPQTE-LKPGIDL----LGPVD-EIFY---DIYD---RYEPVN--------E-- 393 (444)
Q Consensus 341 ~~~~~P~G~~~~~~st~~~~-----~~~~~~-l~~~~~~----l~~~~-~~~~---~~~~---~~~~~~--------~-- 393 (444)
.+..+|+|+.++...+.... ..++++ ++.+++. ++... ..+. .+.. .|.+.- .
T Consensus 378 ~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~ 457 (504)
T 1sez_A 378 FPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKME 457 (504)
T ss_dssp CGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHH
T ss_pred cCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHHHHHH
Confidence 34567999877654443321 112333 3333333 33211 1111 1111 221110 0
Q ss_pred CCCCCEEEccCCCCCCccHHHHHHHHHHHHHhc
Q 013352 394 PSLDNCFISTSYDATTHFESTVTDVLNMYTMIT 426 (444)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
..-.|+|+++.+-.....++|+..++++=++|.
T Consensus 458 ~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il 490 (504)
T 1sez_A 458 KNLPGLFYAGNHRGGLSVGKALSSGCNAADLVI 490 (504)
T ss_dssp HHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHH
Confidence 112689999877666678999999988888875
No 14
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.88 E-value=3.2e-21 Score=198.24 Aligned_cols=255 Identities=18% Similarity=0.233 Sum_probs=160.3
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
|+.++||||||||++||+||++|+++|++|+|+|+++++||++.|.... .++.+|+|++++
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~-------------------~g~~~d~G~~~~ 61 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ-------------------KVKYVDLGGSYV 61 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT-------------------TTSCEESSCCEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC-------------------CCcccccCceEe
Confidence 7778999999999999999999999999999999999999999998642 168999999998
Q ss_pred ecCh-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccC----CCc
Q 013352 81 IANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEN----DPK 155 (444)
Q Consensus 81 ~~~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~----~~~ 155 (444)
.... .+.+++.+.|+..+..+.. ...+.+.+|+.+.++.. +. ......+...+.+++..+..+... .+.
T Consensus 62 ~~~~~~~~~l~~~lgl~~~~~~~~-~~~~~~~~g~~~~~~~~----~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (520)
T 1s3e_A 62 GPTQNRILRLAKELGLETYKVNEV-ERLIHHVKGKSYPFRGP----FP-PVWNPITYLDHNNFWRTMDDMGREIPSDAPW 135 (520)
T ss_dssp CTTCHHHHHHHHHTTCCEEECCCS-SEEEEEETTEEEEECSS----SC-CCCSHHHHHHHHHHHHHHHHHHTTSCTTCGG
T ss_pred cCCcHHHHHHHHHcCCcceecccC-CceEEEECCEEEEecCC----CC-CCCCHHHHHHHHHHHHHHHHHHhhcCcCCCc
Confidence 7654 5666777778764432211 12234557776665532 10 011223333333444333322211 111
Q ss_pred ccc-cccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHH---HHHhhcccCCCcEEEeCCCc
Q 013352 156 THE-GMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLY---AESIARFQGGSPYIYPLYGL 231 (444)
Q Consensus 156 ~~~-~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~s~~~~~G~~~~~~p~gG~ 231 (444)
... .......|+.+|+++...++.++.++..........+..+.++...+..+..+ ...+... ....+.++.+|+
T Consensus 136 ~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~gG~ 214 (520)
T 1s3e_A 136 KAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTT-NGGQERKFVGGS 214 (520)
T ss_dssp GSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCST-TSTTSEEETTCT
T ss_pred cccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccC-CCcceEEEeCCH
Confidence 000 00135689999999988888777766544322111222223443332221110 0001100 123467899999
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
+.|+++|++.+ |++|++|++|++|.. +++++. |.+ +|+++.||+||++.+
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~-~~~~v~-v~~~~g~~~~ad~VI~a~p 265 (520)
T 1s3e_A 215 GQVSERIMDLL---GDRVKLERPVIYIDQ-TRENVL-VETLNHEMYEAKYVISAIP 265 (520)
T ss_dssp HHHHHHHHHHH---GGGEESSCCEEEEEC-SSSSEE-EEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHHHc---CCcEEcCCeeEEEEE-CCCeEE-EEECCCeEEEeCEEEECCC
Confidence 99999998654 789999999999987 556655 666 788999999997643
No 15
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.88 E-value=4.8e-22 Score=203.07 Aligned_cols=252 Identities=19% Similarity=0.144 Sum_probs=161.1
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~ 83 (444)
++||+|||||++||+||++|+++|++|+|+|+++++||++.|++.+ ++.+|+|++++...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~--------------------g~~~d~G~~~~~~~ 98 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID--------------------GYPYEMGGTWVHWH 98 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET--------------------TEEEECSCCCBCTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC--------------------CeeecCCCeEecCc
Confidence 3899999999999999999999999999999999999999998754 79999999998754
Q ss_pred -hHHHHHHHHcCCcceeEEEE----eCceEEEeC--CeEEEecCChHHHhccCCCChHHHHHHHHHHH----HHhhcccC
Q 013352 84 -GALVRVLIHTDVTKYLYFKA----VDGSFVYNK--GKVHKVPATDMEALKSPLMGIFEKRRARKFFI----YVQDYDEN 152 (444)
Q Consensus 84 -~~l~~~l~~~~~~~~l~~~~----~~~~~~~~~--g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~----~~~~~~~~ 152 (444)
..+.+++.+.|+.+.+.... ....+++.+ |+...+|.... .. .+. ..+.+|+. ..+....
T Consensus 99 ~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~-----~~~-~~~~~~~~~~~~~~~~~~~- 169 (495)
T 2vvm_A 99 QSHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEAE--DE-----LLR-SALHKFTNVDGTNGRTVLP- 169 (495)
T ss_dssp SHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHHH--HH-----HHH-HHHHHHHCSSSSTTTTTCS-
T ss_pred cHHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHHH--HH-----HHH-HHHHHHHccchhhhhhcCC-
Confidence 46667777788865544432 123455555 66666654211 00 011 12223322 1111100
Q ss_pred CCcc-c---ccccCCCCcHHHHHHHcC--CChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEE
Q 013352 153 DPKT-H---EGMDLTRVTTRELIAKYG--LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIY 226 (444)
Q Consensus 153 ~~~~-~---~~~~~~~~s~~e~~~~~~--l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~ 226 (444)
.+.. . ....+...|+.+|+++++ +++..+.++...+......+....++...+..+......+..+.....+++
T Consensus 170 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (495)
T 2vvm_A 170 FPHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYK 249 (495)
T ss_dssp CTTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEE
T ss_pred CCCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEE
Confidence 0000 0 001124679999999887 788777766655443222233333444433222110000000000123457
Q ss_pred eCCCcchHHHHHHHHHHHcC-cEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 227 PLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 227 p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
+.+|+++|+++|++.+...| ++|+++++|++|.. +++++ .|++ +|+++.||+||++.+
T Consensus 250 ~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~-~~~~v-~v~~~~g~~~~ad~vI~a~~ 309 (495)
T 2vvm_A 250 FKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVN-ERDAA-RVTARDGREFVAKRVVCTIP 309 (495)
T ss_dssp ETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEE-CSSSE-EEEETTCCEEEEEEEEECCC
T ss_pred eCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEE-cCCEE-EEEECCCCEEEcCEEEECCC
Confidence 89999999999999998888 99999999999987 45554 4665 677899999997644
No 16
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.85 E-value=2.8e-20 Score=187.82 Aligned_cols=250 Identities=17% Similarity=0.218 Sum_probs=153.9
Q ss_pred CC-CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccce
Q 013352 1 MD-EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (444)
Q Consensus 1 M~-~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~ 79 (444)
|+ .++||||||||++||+||++|+++|++|+|+|+++++||++.+.... ++.+|+|+++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~ 60 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTID--------------------GAVLEIGGQW 60 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEET--------------------TEEEECSCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccC--------------------CceeccCCeE
Confidence 54 46899999999999999999999999999999999999999998743 7899999998
Q ss_pred eecC-hHHHHHHHHcCCcceeEEEEeCceEE-EeC-CeEEEecCChHHHhccCCCChHHHHHHHHHHH----HHhhcccC
Q 013352 80 IIAN-GALVRVLIHTDVTKYLYFKAVDGSFV-YNK-GKVHKVPATDMEALKSPLMGIFEKRRARKFFI----YVQDYDEN 152 (444)
Q Consensus 80 l~~~-~~l~~~l~~~~~~~~l~~~~~~~~~~-~~~-g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~----~~~~~~~~ 152 (444)
+... ..+.+++.+.++..+..+. +...+ +.+ |+.+.+..... .++......+.+++. ........
T Consensus 61 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (453)
T 2yg5_A 61 VSPDQTALISLLDELGLKTFERYR--EGESVYISSAGERTRYTGDSF------PTNETTKKEMDRLIDEMDDLAAQIGAE 132 (453)
T ss_dssp BCTTCHHHHHHHHHTTCCEEECCC--CSEEEEECTTSCEEEECSSSC------SCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ecCccHHHHHHHHHcCCccccccc--CCCEEEEeCCCceeeccCCCC------CCChhhHHHHHHHHHHHHHHHhhcCCC
Confidence 8754 3566677777876543322 22222 222 55554432100 011111111112211 11111111
Q ss_pred CCccc-ccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCC-CCchHHHHHHHHHHHHHhhcc-----cCCCcEE
Q 013352 153 DPKTH-EGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYL-NEPALDTVKRMKLYAESIARF-----QGGSPYI 225 (444)
Q Consensus 153 ~~~~~-~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~s~~~~-----~G~~~~~ 225 (444)
.+... ....+...|+.+|++++..++.++.++..........+.. ..++...+.. +...+.+ .+...+.
T Consensus 133 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~----~~~~g~~~~~~~~~~~~~~ 208 (453)
T 2yg5_A 133 EPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLM----AASAGSFSHLVDEDFILDK 208 (453)
T ss_dssp CGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHH----HHHTTCHHHHHCHHHHTCE
T ss_pred CCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHH----hccCCcHhhhccCCCcceE
Confidence 11100 0011246899999999888888877776544322111222 2344433222 1111100 0012357
Q ss_pred EeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 226 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 226 ~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
++++|++.|+++|++. .|++|++|++|++|.. ++++.+.|+++|+++.||+||++.+
T Consensus 209 ~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~-~~~~~v~v~~~~~~~~ad~VI~a~p 265 (453)
T 2yg5_A 209 RVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKW-NESGATVLADGDIRVEASRVILAVP 265 (453)
T ss_dssp EETTCTHHHHHHHHHH---HGGGEECSCCEEEEEE-ETTEEEEEETTTEEEEEEEEEECSC
T ss_pred EEcCChHHHHHHHHHh---cCCcEEcCCceEEEEE-eCCceEEEEECCeEEEcCEEEEcCC
Confidence 8999999999999864 3789999999999987 4554244667888999999997643
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.85 E-value=1.6e-19 Score=183.46 Aligned_cols=377 Identities=12% Similarity=0.100 Sum_probs=207.1
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC-CeEEEEecCCCCCccceec-chHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSL-NLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
..+||+|||||++||++|+.|+++| ++|+|+|+++++||++++. +.+ ++.+|.|++++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~--------------------g~~~~~g~~~~ 67 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN--------------------GFTWDLGGHVI 67 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT--------------------SCEEESSCCCB
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC--------------------CcEEeeCCccc
Confidence 4689999999999999999999999 8999999999999999995 332 89999999999
Q ss_pred ecChHHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHH-HHHHHHHHHHhhcccCCCccccc
Q 013352 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEK-RRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 81 ~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek-~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
+...+.+..|.+.-..++... ....+++.+|+++.+|.+.. +. .++..++ +.+..++..-.. .+
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~g~~~~~P~~~~--~~--~l~~~~~~~~~~~ll~~~~~----~~----- 132 (484)
T 4dsg_A 68 FSHYQYFDDVMDWAVQGWNVL--QRESWVWVRGRWVPYPFQNN--IH--RLPEQDRKRCLDELVRSHAR----TY----- 132 (484)
T ss_dssp CCSBHHHHHHHHHHCSCEEEE--ECCCEEEETTEEEESSGGGC--GG--GSCHHHHHHHHHHHHHHHHC----CC-----
T ss_pred ccChHHHHHHHHHHhhhhhhc--cCceEEEECCEEEEeCccch--hh--hCCHHHHHHHHHHHHHHHhc----cC-----
Confidence 876554444433212332221 23456777899999883311 11 1121211 122233322111 11
Q ss_pred ccCCCCcHHHHHHHcCCChhHH-HHHHHHh-hcccCC------CCC-C-CchHHHHHHHHHHHHHhh--cccCCCcEEEe
Q 013352 160 MDLTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRDD------RYL-N-EPALDTVKRMKLYAESIA--RFQGGSPYIYP 227 (444)
Q Consensus 160 ~~~~~~s~~e~~~~~~l~~~~~-~~~~~~~-~l~~~~------~~~-~-~~~~~~~~~~~~~~~s~~--~~~G~~~~~~p 227 (444)
.....++.+|+.+. +...+. .++.+.. .++..+ .+. . .+.......+...+.... .+.....|.||
T Consensus 133 -~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp 210 (484)
T 4dsg_A 133 -TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFP 210 (484)
T ss_dssp -SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEE
T ss_pred -CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEee
Confidence 12467899988765 333321 1111111 111100 000 0 011111011111111110 01013457888
Q ss_pred C-CCcchHHHHHHHHHHHcCcEEEcC--CcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC--CCccccc-------
Q 013352 228 L-YGLGELPQAFARLSAVYGGTYMLN--KPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY--LPNKVRK------- 294 (444)
Q Consensus 228 ~-gG~~~l~~al~r~~~~~Gg~i~l~--~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~--~~~~~~~------- 294 (444)
. +|++.|+++|++.+.. ..|+++ ++|++|.. ++++ |++ +|+++.||+||++.+. +.+++..
T Consensus 211 ~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~-~~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 284 (484)
T 4dsg_A 211 QRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDA-DAKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYD 284 (484)
T ss_dssp SSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEET-TTTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGG
T ss_pred cCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEe-cCCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCH
Confidence 7 7999999999986543 279999 56999987 4554 334 7889999999986432 1111110
Q ss_pred -----ccee-EEE----EEEecCCCCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEeecCC---
Q 013352 295 -----VGRV-ARA----IAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVSTEAET--- 360 (444)
Q Consensus 295 -----~~~~-~r~----i~i~~~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st~~~~--- 360 (444)
...+ .++ .+.++.+... +-...+++++|..+. +...+...+ .++..+|+|+.++++......
T Consensus 285 ~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~~~~~~i~vp~~~~---~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~ 360 (484)
T 4dsg_A 285 EWPAIADKMVYSSTNVIGIGVKGTPPP-HLKTACWLYFPEDTS---PFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKP 360 (484)
T ss_dssp GHHHHHHHCCEEEEEEEEEEEESCCCG-GGTTCCEEECCSTTC---SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBC
T ss_pred HHHHHHhCCCcCceEEEEEEEcCCCcc-cCCCCeEEEEEcCCC---eEEEEEeecCCCcccCCCCeEEEEEEEecCcCCc
Confidence 1111 122 1223444221 112357889986653 112234444 567789999998877665421
Q ss_pred CCcccccHhHHhhc---C---Ccc---ceeee-eee---ccccCC--------C-CCCCCEEEccC---CCCCC-ccHHH
Q 013352 361 DHPQTELKPGIDLL---G---PVD---EIFYD-IYD---RYEPVN--------E-PSLDNCFISTS---YDATT-HFEST 414 (444)
Q Consensus 361 ~~~~~~l~~~~~~l---~---~~~---~~~~~-~~~---~~~~~~--------~-~~~~~~~~~~~---~~~~~-~~~~~ 414 (444)
.+.++.++.+++-| + +.. ..++. +.. .|.+.. . ....||++++. +.... .-|.|
T Consensus 361 ~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~~l~~~Gr~g~~~y~v~~~d~~ 440 (484)
T 4dsg_A 361 VNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSRCIYSRGRFGAWRYEVGNQDHS 440 (484)
T ss_dssp CCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCGGGCSHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhCCcEeecCCcccccCCCChHHH
Confidence 23344455555422 1 211 11221 111 222110 0 01128999976 44432 56999
Q ss_pred HHHHHHHHHHhc
Q 013352 415 VTDVLNMYTMIT 426 (444)
Q Consensus 415 ~~~~~~~~~~~~ 426 (444)
+.+++.+.++|.
T Consensus 441 i~sg~~aa~~i~ 452 (484)
T 4dsg_A 441 FMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999999998
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.79 E-value=1e-18 Score=174.84 Aligned_cols=247 Identities=15% Similarity=0.128 Sum_probs=144.2
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCC-CeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEeccccee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l 80 (444)
..++||+|||||++||+||++|+++| ++|+|+|+++++||+++|.+.+ ++.+|.|++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~--------------------G~~~d~G~~~~ 63 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYH--------------------GRRYEMGAIMG 63 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEET--------------------TEECCSSCCCB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCC--------------------CcccccCceee
Confidence 46799999999999999999999999 9999999999999999998754 79999999988
Q ss_pred ecCh-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhh-cccCCCc-cc
Q 013352 81 IANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQD-YDENDPK-TH 157 (444)
Q Consensus 81 ~~~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~-~~~~~~~-~~ 157 (444)
.... .+.+++.+.|+... .......+.+.+|+.. .|......... + ...+.++...+.. +...... ..
T Consensus 64 ~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~~~g~~~-~~~~~~~~~~~-----~-~~~~~~l~~~~~~~~~~~~~~~~~ 134 (424)
T 2b9w_A 64 VPSYDTIQEIMDRTGDKVD--GPKLRREFLHEDGEIY-VPEKDPVRGPQ-----V-MAAVQKLGQLLATKYQGYDANGHY 134 (424)
T ss_dssp CTTCHHHHHHHHHHCCCCC--SCCCCEEEECTTSCEE-CGGGCTTHHHH-----H-HHHHHHHHHHHHTTTTTTTSSSSS
T ss_pred cCCcHHHHHHHHHhCCccc--cccccceeEcCCCCEe-ccccCcccchh-----H-HHHHHHHHHHHhhhhhhcccccch
Confidence 7653 45556666676421 1111223344566543 33210000000 0 0122233332222 1100000 00
Q ss_pred -ccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHH
Q 013352 158 -EGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQ 236 (444)
Q Consensus 158 -~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~ 236 (444)
........|+.+|+++.+.+.....++.+...... .+....|+...+..+... ..+....| +.+.+.+|++++++
T Consensus 135 ~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~-~~~~~~~~--~~~~~~~g~~~l~~ 210 (424)
T 2b9w_A 135 NKVHEDLMLPFDEFLALNGCEAARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFV-TMMSFAKG--DLWTWADGTQAMFE 210 (424)
T ss_dssp SCCCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHH-HHHHHHHT--CCBCCTTCHHHHHH
T ss_pred hhhhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHh-hhhcccCC--ceEEeCChHHHHHH
Confidence 00112358999999998776433333222222111 122233444432211110 11111102 23467899999999
Q ss_pred HHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 237 AFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 237 al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
++.+. .+.++++|++|++|.. +++++. |+++++++.||+||++.+
T Consensus 211 ~l~~~---l~~~v~~~~~V~~i~~-~~~~v~-v~~~~g~~~ad~Vv~a~~ 255 (424)
T 2b9w_A 211 HLNAT---LEHPAERNVDITRITR-EDGKVH-IHTTDWDRESDVLVLTVP 255 (424)
T ss_dssp HHHHH---SSSCCBCSCCEEEEEC-CTTCEE-EEESSCEEEESEEEECSC
T ss_pred HHHHh---hcceEEcCCEEEEEEE-ECCEEE-EEECCCeEEcCEEEECCC
Confidence 98754 4668999999999987 455654 776444599999997643
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.76 E-value=8.6e-18 Score=168.37 Aligned_cols=246 Identities=17% Similarity=0.122 Sum_probs=143.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC-
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~- 83 (444)
+||||||||++|++||+.|+++|++|+|||+++++||++.+.+.. ...++.+++|++++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~-----------------cipg~~~~~g~~~~~~~~ 64 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESR-----------------NVPGLRVEIGGAYLHRKH 64 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECS-----------------SSTTCEEESSCCCBCTTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceecc-----------------CCCCceEecCCeeeCCCC
Confidence 799999999999999999999999999999999999999987632 11268899999988654
Q ss_pred -hHHHHHHHHcCCcceeEEEEeCceEEE--eCCeEEEe-cCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccc
Q 013352 84 -GALVRVLIHTDVTKYLYFKAVDGSFVY--NKGKVHKV-PATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 84 -~~l~~~l~~~~~~~~l~~~~~~~~~~~--~~g~~~~~-p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
..+.+.+.+.++..... .......+ .++.+... |.. .+... .+ +..+.++......+....+.....
T Consensus 65 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~-~~~~~~l~~~~~~~~~~~~~~~~~ 135 (431)
T 3k7m_X 65 HPRLAAELDRYGIPTAAA--SEFTSFRHRLGPTAVDQAFPIP-GSEAV-----AV-EAATYTLLRDAHRIDLEKGLENQD 135 (431)
T ss_dssp CHHHHHHHHHHTCCEEEC--CCCCEECCBSCTTCCSSSSCCC-GGGHH-----HH-HHHHHHHHHHHTTCCTTTCTTSSS
T ss_pred cHHHHHHHHHhCCeeeec--CCCCcEEEEecCCeecCCCCCC-HHHHH-----HH-HHHHHHHHHHHHhcCCCCCccCcc
Confidence 34556666667652211 11111111 12221111 111 11110 01 123344444444332221111111
Q ss_pred -ccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhh--cccCCCcEEEeCCCcchHHH
Q 013352 160 -MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIA--RFQGGSPYIYPLYGLGELPQ 236 (444)
Q Consensus 160 -~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~G~~~~~~p~gG~~~l~~ 236 (444)
...+ .++.++++..+.++....++...............+....+..+...-..+. .. + ... .+.+|++.+++
T Consensus 136 ~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~g~~~l~~ 211 (431)
T 3k7m_X 136 LEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVL-S-LDE-VFSNGSADLVD 211 (431)
T ss_dssp CGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHH-T-CCE-EETTCTHHHHH
T ss_pred hhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeec-c-hhh-hcCCcHHHHHH
Confidence 1223 8899999988888877665543332211112222233333222111000000 11 1 122 67889998888
Q ss_pred HHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 237 AFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 237 al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
+++ +..| +|++|++|++|.. +++++. |++ +|++++||+||++.+
T Consensus 212 ~~~---~~~g-~i~~~~~V~~i~~-~~~~v~-v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 212 AMS---QEIP-EIRLQTVVTGIDQ-SGDVVN-VTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp HHH---TTCS-CEESSCCEEEEEC-SSSSEE-EEETTSCCEEEEEEEECSC
T ss_pred HHH---hhCC-ceEeCCEEEEEEE-cCCeEE-EEECCCCEEEeCEEEEecC
Confidence 776 3456 9999999999987 455544 666 777899999997654
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.76 E-value=6.1e-18 Score=173.52 Aligned_cols=235 Identities=15% Similarity=0.159 Sum_probs=130.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC-CeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~ 81 (444)
..+||||||||++||+||++|+++| ++|+|||+++++||++.|.... .++.+|+|++++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~-------------------~G~~~D~G~~~~~ 67 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY-------------------QGRKYDIGASWHH 67 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------GGCEEESSCCEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------CCcEEecCCeEEe
Confidence 3589999999999999999999999 9999999999999999998641 1799999999987
Q ss_pred cC--hHHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccc
Q 013352 82 AN--GALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (444)
Q Consensus 82 ~~--~~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~ 159 (444)
.. .++..++.+.++... ...+.+.++....++.+.. .+.......+. +.+..+..+........+
T Consensus 68 ~~~~~~~~~~~~~lg~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 134 (516)
T 1rsg_A 68 DTLTNPLFLEEAQLSLNDG------RTRFVFDDDNFIYIDEERG-RVDHDKELLLE-IVDNEMSKFAELEFHQHL----- 134 (516)
T ss_dssp CTTTCHHHHHHHHHHHHHC------CCCEECCCCCCEEEETTTE-ECTTCTTTCHH-HHHHHHHHHHHHHC---------
T ss_pred cCCCChHHHHHHHhCCCCc------ceeEEECCCCEEEEcCCCc-cccccHHHHHH-HHHHHHHHHHHHHhhhcc-----
Confidence 53 356666555554211 0112222333332332210 00000000111 111122222211111000
Q ss_pred ccCCCCcHHHHHHHc------CCChhHHHHHHHHhh---cccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCC
Q 013352 160 MDLTRVTTRELIAKY------GLDDNTIDFIGHALA---LHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYG 230 (444)
Q Consensus 160 ~~~~~~s~~e~~~~~------~l~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG 230 (444)
...+.|+.+++.++ .+.+....++...+. .+........++... +....| ...++++
T Consensus 135 -~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~----------~~~~~~--~~~~~~g- 200 (516)
T 1rsg_A 135 -GVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDT----------YFGHQG--RNAFALN- 200 (516)
T ss_dssp ----CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHH----------CCCCSS--CCEEESC-
T ss_pred -CCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChHHH----------HhhccC--cchhhhC-
Confidence 12457888876543 123322222222221 111111111121111 111212 2346777
Q ss_pred cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 231 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
++.|+++|++.+. +++|++|++|++|.. .++..+.|++ +|+++.||+||++.+
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~-~~~~~v~v~~~~g~~~~ad~VI~t~p 254 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITR-EPSKNVTVNCEDGTVYNADYVIITVP 254 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEE-CTTSCEEEEETTSCEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEE-cCCCeEEEEECCCcEEECCEEEECCC
Confidence 8899888876443 367999999999997 3333356766 788899999998743
No 21
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.72 E-value=2e-17 Score=162.65 Aligned_cols=345 Identities=14% Similarity=0.174 Sum_probs=190.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEE-ecccceee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKFII 81 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dlgp~~l~ 81 (444)
..+||+|||||++||++|+.|+++|++|+|+|+++++||++.+... ..++.+ |.|++++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-------------------~~G~~~~~~G~~~~~ 88 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYD-------------------DAGVLIHPYGPHIFH 88 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEEC-------------------TTSCEECTTSCCCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeec-------------------cCCceEeecCCcccC
Confidence 4689999999999999999999999999999999999999998751 126776 99999988
Q ss_pred cCh-HHHHHHHHcCCcceeEEEE-eCceEEEeCCeEEEecCChHH--HhccCCCChHHHHHHHHHHHHHhhcccCCCccc
Q 013352 82 ANG-ALVRVLIHTDVTKYLYFKA-VDGSFVYNKGKVHKVPATDME--ALKSPLMGIFEKRRARKFFIYVQDYDENDPKTH 157 (444)
Q Consensus 82 ~~~-~l~~~l~~~~~~~~l~~~~-~~~~~~~~~g~~~~~p~~~~~--~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~ 157 (444)
... .+.+.+.+.+. +.. ....+++.+|+++++|.+... .+....++. +....++.. .. .+
T Consensus 89 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~---~~~~~~l~~-~~----~~--- 152 (397)
T 3hdq_A 89 TNSKDVFEYLSRFTE-----WRPYQHRVLASVDGQLLPIPINLDTVNRLYGLNLTS---FQVEEFFAS-VA----EK--- 152 (397)
T ss_dssp ESCHHHHHHHHTSCC-----EEECCCBEEEEETTEEEEESCCHHHHHHHHTCCCCH---HHHHHHHHH-HC----CC---
T ss_pred CChHHHHHHHHHhhh-----cccccccceEEECCEEEEcCCChHHHHHhhccCCCH---HHHHHHHhh-cc----cC---
Confidence 664 44555554542 222 233456779999999987321 222211221 223333331 11 11
Q ss_pred ccccCCCCcHHHHHHHcCCChhH-HHHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcE-EEeCCCcchH
Q 013352 158 EGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPY-IYPLYGLGEL 234 (444)
Q Consensus 158 ~~~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~-~~p~gG~~~l 234 (444)
..+..++.+|+.+. +.+.+ ..++.+.. ..+..+ ....++. .+.|+......-..| -+..| .+|++|.+.|
T Consensus 153 ---~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~-~~~Lsa~-~~~Rvp~~~~~d~~y-f~~~~qg~P~gGy~~l 225 (397)
T 3hdq_A 153 ---VEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLD-PSELDAS-VTARVPTRTNRDNRY-FADTYQAMPLHGYTRM 225 (397)
T ss_dssp ---CSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSC-GGGSBTT-TGGGSCCCSSCCCBS-CCCSEEEEETTCHHHH
T ss_pred ---CCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCC-HHHHHHH-HHHhcCcccccCccc-hhhhheeccCCCHHHH
Confidence 12568999998765 44444 33444333 233211 1111221 111211000000011 12345 4899999999
Q ss_pred HHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCCcccc-cccee-EEEEEEec--CCCC
Q 013352 235 PQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVR-KVGRV-ARAIAIMS--HPIP 310 (444)
Q Consensus 235 ~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~~~~~-~~~~~-~r~i~i~~--~~l~ 310 (444)
.++|+ +..|++|++|++|.++ +.++.+|+||++... +.+.. ..+++ .|+..+.. .+..
T Consensus 226 ~e~l~---~~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~-d~~~~~~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 226 FQNML---SSPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPV-DAFFDFCYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp HHHHT---CSTTEEEEESCCGGGT--------------TTTSCEEEEEECSCH-HHHTTTTTCCCCEEEEEEEEEEESSS
T ss_pred HHHHH---hccCCEEEECCeEEec--------------cccccCCEEEEcCCH-HHHHHHhcCCCCCceEEEEEEEeccc
Confidence 88875 4569999999999854 223468899977431 12211 12221 23322211 1211
Q ss_pred CCCCCCeEEEEeCCCccCCCCcEEEEEeCCCcccccCCcEEEEEEeecCCCCccccc--HhHHhhcCCccceeeeeeecc
Q 013352 311 NTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTEL--KPGIDLLGPVDEIFYDIYDRY 388 (444)
Q Consensus 311 ~~~~~~~~~i~~p~~~~~~~~~i~~~~~s~~~~~~P~G~~~~~~st~~~~~~~~~~l--~~~~~~l~~~~~~~~~~~~~~ 388 (444)
.. ...+|+.+|... . -.. |.+++.-+.. |.+++++....+++..+|-=-+ +.-.+++ ..|
T Consensus 288 ~~--~~~~~vn~~d~~-p-~tR--i~e~k~~~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~-----------~~y 349 (397)
T 3hdq_A 288 QL--LPTGTVNYPNDY-A-YTR--VSEFKHITGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELY-----------KKY 349 (397)
T ss_dssp CS--CSSSEEECSSSS-S-CSE--EEEHHHHHCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHH-----------HHH
T ss_pred cC--CCCeEEEeCCCC-c-ceE--EEeecccCCC-CCCCEEEEEEECCCCCccccccCchhHHHHH-----------HHH
Confidence 11 135688898543 1 122 4444421222 4577888777665322221000 0000011 112
Q ss_pred ccCCCCCCCCEEEc---cCCCCCCccHHHHHHHHHHHHHhcC
Q 013352 389 EPVNEPSLDNCFIS---TSYDATTHFESTVTDVLNMYTMITG 427 (444)
Q Consensus 389 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (444)
.... ...+||+.. +.|-. .+-|.++.+++++++++..
T Consensus 350 ~~~a-~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 350 EALA-DAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp HHHH-HHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC
T ss_pred HHHH-hcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhc
Confidence 1110 013678886 45655 4679999999999999864
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.72 E-value=2.4e-16 Score=160.90 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=142.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.++... ..++.+|+|++++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~------------------~~~~~~~~g~~~~~~ 93 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNE------------------EAGWYANLGPMRLPE 93 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEET------------------TTTEEEESSCCCEET
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccC------------------CCCchhhcCcccccc
Confidence 46899999999999999999999999999999999999999887521 127899999998876
Q ss_pred ChHH-HHHHHHcCCcceeEEEEe-CceEEEeCCeEEEecC---ChHHHhccCC------CChHH--HHHHHHHHHHHhhc
Q 013352 83 NGAL-VRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPA---TDMEALKSPL------MGIFE--KRRARKFFIYVQDY 149 (444)
Q Consensus 83 ~~~l-~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~---~~~~~~~~~~------~~~~e--k~~~~~f~~~~~~~ 149 (444)
.... .+++.+.|+... .+... ...+++.+|.....+. . ...+...+ ....+ ...+.++...+...
T Consensus 94 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (498)
T 2iid_A 94 KHRIVREYIRKFDLRLN-EFSQENDNAWYFIKNIRKKVGEVKKD-PGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRT 171 (498)
T ss_dssp TCHHHHHHHHHTTCCEE-EECSCCTTSEEEETTEEEEHHHHHHC-GGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHS
T ss_pred hHHHHHHHHHHhCCCce-eecccCCccEEEeCCeeecccccccC-ccccccCCCccccCCCHHHHHHHHHHHHHHHHhhc
Confidence 5544 445555676421 22211 2233444555443211 0 01111110 01110 01112222222111
Q ss_pred ccCCCcccccccCCCCcHHHHHHHcC-CChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeC
Q 013352 150 DENDPKTHEGMDLTRVTTRELIAKYG-LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 228 (444)
Q Consensus 150 ~~~~~~~~~~~~~~~~s~~e~~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~ 228 (444)
.. .. ....++..++.+|+++.+ +++.....+...+... ..+ .......+... ..+ . ....+.++.
T Consensus 172 ~~--~~--~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~----~~~-~--~~~~~~~~~ 237 (498)
T 2iid_A 172 NC--SY--ILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNED--SGY-YVSFIESLKHD----DIF-A--YEKRFDEIV 237 (498)
T ss_dssp CH--HH--HHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCG--GGT-TSBHHHHHHHH----HHH-T--TCCCEEEET
T ss_pred cH--HH--HHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcc--cch-hHHHHHHHHHH----hcc-c--cCcceEEeC
Confidence 00 00 001124678999998876 5666555444332110 001 11112221110 111 1 234578899
Q ss_pred CCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCe----EEEcCEEEeCCC
Q 013352 229 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE----TAKCKKVVCDPS 286 (444)
Q Consensus 229 gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~----~i~ad~VI~~~~ 286 (444)
+|++.|+++|++.+. ..|++|++|++|.. +++++ .|++ +|+ +++||+||++.+
T Consensus 238 gG~~~l~~~l~~~l~---~~i~~~~~V~~I~~-~~~~v-~v~~~~~~~~~~~~~ad~vI~t~p 295 (498)
T 2iid_A 238 DGMDKLPTAMYRDIQ---DKVHFNAQVIKIQQ-NDQKV-TVVYETLSKETPSVTADYVIVCTT 295 (498)
T ss_dssp TCTTHHHHHHHHHTG---GGEESSCEEEEEEE-CSSCE-EEEEECSSSCCCEEEESEEEECSC
T ss_pred CcHHHHHHHHHHhcc---cccccCCEEEEEEE-CCCeE-EEEEecCCcccceEEeCEEEECCC
Confidence 999999999987654 37999999999998 45554 4544 443 589999998743
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.72 E-value=1.9e-16 Score=161.26 Aligned_cols=263 Identities=14% Similarity=0.104 Sum_probs=139.1
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~ 81 (444)
++.+||+|||||++||+||+.|+++|++|+|+|+++++||++.+............ .........++.+|.|+..+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~ 85 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSG---ETQKCTFSEGHFYNVGATRIP 85 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTS---CEEECCCCTTCEEESSCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccc---hhhhhcccCCCcCCcchhhcc
Confidence 45689999999999999999999999999999999999999988764210000000 000001124678999998887
Q ss_pred cChHHHHHHHHcCCcceeEEEEe-CceEEE-eC-----CeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhccc-CC
Q 013352 82 ANGALVRVLIHTDVTKYLYFKAV-DGSFVY-NK-----GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE-ND 153 (444)
Q Consensus 82 ~~~~l~~~l~~~~~~~~l~~~~~-~~~~~~-~~-----g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~-~~ 153 (444)
....+.+.+.+.|+... .+... ...+++ .+ |....+|....+ + .. .+..++........ ..
T Consensus 86 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-------~~--~~~~l~~~~~~~~~~~~ 154 (489)
T 2jae_A 86 QSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKAD-T-------FG--YMSELLKKATDQGALDQ 154 (489)
T ss_dssp TTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHH-H-------HH--HHHHHHHHHHHHTTTTT
T ss_pred cHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhh-h-------hc--cHHHHHHHHHhcccccc
Confidence 66677777777887522 12111 223454 44 555544422111 1 00 01111111111000 00
Q ss_pred CcccccccCCCCcHHHHHHHcCCChhHHHHHHHHhhcccCC----CCCC----CchHHHHHH--HHHHHHHhhcccCCCc
Q 013352 154 PKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD----RYLN----EPALDTVKR--MKLYAESIARFQGGSP 223 (444)
Q Consensus 154 ~~~~~~~~~~~~s~~e~~~~~~l~~~~~~~~~~~~~l~~~~----~~~~----~~~~~~~~~--~~~~~~s~~~~~G~~~ 223 (444)
+. . ..+..++.+|+++++-......+-......+... .... ......+.. +..++.....+.....
T Consensus 155 ~~--~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (489)
T 2jae_A 155 VL--S--REDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMM 230 (489)
T ss_dssp TS--C--HHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSS
T ss_pred cc--c--hhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCcc
Confidence 00 0 0123467777776421100000000000000000 0000 001111100 0001110001112346
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CC---eEEEcCEEEeCCC
Q 013352 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG---ETAKCKKVVCDPS 286 (444)
Q Consensus 224 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g---~~i~ad~VI~~~~ 286 (444)
+.++++|++.|+++|++.+.. ++|++|++|++|.. +++++. |++ +| +++.||+||++.+
T Consensus 231 ~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~-~~~~v~-v~~~~g~~~~~~~ad~vI~a~p 293 (489)
T 2jae_A 231 MFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKN-VSEGVT-VEYTAGGSKKSITADYAICTIP 293 (489)
T ss_dssp EEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEE-ETTEEE-EEEEETTEEEEEEESEEEECSC
T ss_pred EEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEE-cCCeEE-EEEecCCeEEEEECCEEEECCC
Confidence 889999999999999875532 78999999999998 455554 544 55 6899999998743
No 24
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.71 E-value=4.1e-18 Score=169.00 Aligned_cols=352 Identities=13% Similarity=0.108 Sum_probs=190.3
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcC-CCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEe-cccc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVD-MIPK 78 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-lgp~ 78 (444)
|++++||+|||||++||+||++|+++ |++|+|+|+++++||++++.... ..++.+| .|++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~ 65 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEP------------------QTGIEVHKYGAH 65 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECT------------------TTCCEEETTSCC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeecccc------------------CCCEEEEeCCCc
Confidence 44579999999999999999999999 99999999999999999998641 0278885 9999
Q ss_pred eeecCh-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChH--HHhccCCCChHHHHHHHHHHHHHhhcccCCCc
Q 013352 79 FIIANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDM--EALKSPLMGIFEKRRARKFFIYVQDYDENDPK 155 (444)
Q Consensus 79 ~l~~~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~--~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~ 155 (444)
++.... .+.+.+.+.++... + ....+++.+|+.+.+|.+.. ..+....+. . ..+.+++...... . +
T Consensus 66 ~~~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~-~--~~~~~~l~~~~~~--~-~- 134 (399)
T 1v0j_A 66 LFHTSNKRVWDYVRQFTDFTD--Y--RHRVFAMHNGQAYQFPMGLGLVSQFFGKYFT-P--EQARQLIAEQAAE--I-D- 134 (399)
T ss_dssp CEEESCHHHHHHHTTTCCBCC--C--CCCEEEEETTEEEEESSSHHHHHHHHTSCCC-H--HHHHHHHHHHGGG--S-C-
T ss_pred EEcCCcHHHHHHHHHhhhhhc--c--ccceEEEECCEEEeCCCCHHHHHHHhcccCC-H--HHHHHHHHHHhhc--c-C-
Confidence 887654 45566655665221 1 12345667899999998731 222221111 1 2222222221111 0 0
Q ss_pred ccccccCCCCcHHHHHHHcCCChhH-HHHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEE-EeCCCcc
Q 013352 156 THEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLG 232 (444)
Q Consensus 156 ~~~~~~~~~~s~~e~~~~~~l~~~~-~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~-~p~gG~~ 232 (444)
.....|+.+|+.+. +.+.+ ..++.+.. ..+..+ ..+.++... .++......-..+ +...|. +|++|++
T Consensus 135 -----~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~-~~~ls~~~~-~~~~~~~~~~~~~-~~~~~~~~p~gG~~ 205 (399)
T 1v0j_A 135 -----TADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTD-PKELPAANI-TRLPVRYTFDNRY-FSDTYEGLPTDGYT 205 (399)
T ss_dssp -----TTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSC-GGGSCGGGC-SCCCCCSSSCCCS-CCCSEEECBTTHHH
T ss_pred -----CCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCC-hhhcChHhh-hcceeEeccccch-hhhhhcccccccHH
Confidence 11457888888774 55544 34443332 222211 111121111 0000000000011 123453 9999999
Q ss_pred hHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEE-EcCEEEeCCCC--CCcc-cccccee-EEEEE-Eec
Q 013352 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETA-KCKKVVCDPSY--LPNK-VRKVGRV-ARAIA-IMS 306 (444)
Q Consensus 233 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i-~ad~VI~~~~~--~~~~-~~~~~~~-~r~i~-i~~ 306 (444)
+|+++|++ ..|++|++|++|++|.. + | + ++ .||+||++.+. +.++ +....-. .+.+. ..+
T Consensus 206 ~l~~~l~~---~~g~~I~l~~~V~~I~~-~------v--~--~~~~aD~VI~t~p~~~l~~~~l~~l~y~s~~~~~~~~~ 271 (399)
T 1v0j_A 206 AWLQNMAA---DHRIEVRLNTDWFDVRG-Q------L--R--PGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLP 271 (399)
T ss_dssp HHHHHHTC---STTEEEECSCCHHHHHH-H------H--T--TTSTTCCEEECSCHHHHTTTTTCCCCEEEEEEEEEEES
T ss_pred HHHHHHHh---cCCeEEEECCchhhhhh-h------h--h--hcccCCEEEECCcHHHHHhhhhCCCCcceEEEEEEEEc
Confidence 99999875 56899999999999864 1 2 1 35 69999987432 1121 1111110 12222 223
Q ss_pred CCCCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccc-cCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeee
Q 013352 307 HPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVA-PKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDI 384 (444)
Q Consensus 307 ~~l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~-P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 384 (444)
.+. .. ...++.+|..... ...+ ..++ ..+..+ |+++.++......+- ++ . ....|-..
T Consensus 272 ~~~--~~--~~~~~~~~~~~~~-~~ri--~~~~~~~~~~~~~~~~~~v~~e~~~~~-~~--------~----~~~~ypv~ 331 (399)
T 1v0j_A 272 IGD--FQ--GTAVMNYNDLDVP-YTRI--HEFRHFHPERDYPTDKTVIMREYSRFA-ED--------D----DEPYYPIN 331 (399)
T ss_dssp SSC--SS--SSSEEEECCTTSS-CSEE--EEGGGGCTTSCCCSSCEEEEEEEEEEC-CT--------T----SCCCEECC
T ss_pred ccc--CC--CCeEEEeCCCCCC-ccee--EeecCCCCCCcCCCCCeEEEEeecccc-cC--------C----CccccccC
Confidence 332 11 2246778754321 1222 3333 334454 678787776654311 00 0 00111100
Q ss_pred e-------eccccCCCCCC---CCEEEccC---CCCCCccHHHHHHHHHHHHHhc
Q 013352 385 Y-------DRYEPVNEPSL---DNCFISTS---YDATTHFESTVTDVLNMYTMIT 426 (444)
Q Consensus 385 ~-------~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
. ..|.... ... .||++|+. |.. ...|+|+.+++++.+++.
T Consensus 332 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~G~~~~~~~-~~~e~~i~sa~~~a~~l~ 384 (399)
T 1v0j_A 332 TEADRALLATYRARA-KSETASSKVLFGGRLGTYQY-LDMHMAIASALNMYDNVL 384 (399)
T ss_dssp CHHHHHHHHHHHHHH-HHHHHHHCEEECHHHHHTCC-CCHHHHHHHHHHHHHHTH
T ss_pred cHHHHHHHHHHHHHH-HhccccCCEEEccceEEEEe-cCHHHHHHHHHHHHHHHh
Confidence 0 0111111 012 68999974 555 456999999999999985
No 25
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.70 E-value=3.7e-16 Score=152.33 Aligned_cols=238 Identities=11% Similarity=0.188 Sum_probs=139.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecC-CCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-DYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~-~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~ 81 (444)
..+||+|||||++||+||+.|+++|++|+|+|++ +++||++.++.... ..+..+ ...++.+++|++++.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---------~~~~~~-~~~~~~~e~G~~~~~ 112 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---------GEPSPF-ADPAQYAEAGAMRLP 112 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---------TSCCSS-SSTTCCEESSCCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---------cccccc-cCCCcEEecCceeec
Confidence 4689999999999999999999999999999999 99999999886210 000000 023788999999887
Q ss_pred cChH-HHHHHHHcCCcceeEEEEe-----------------------------------------CceEEEeCCeEEEec
Q 013352 82 ANGA-LVRVLIHTDVTKYLYFKAV-----------------------------------------DGSFVYNKGKVHKVP 119 (444)
Q Consensus 82 ~~~~-l~~~l~~~~~~~~l~~~~~-----------------------------------------~~~~~~~~g~~~~~p 119 (444)
...+ +.+.+.+.|+.....+..- ...+++.+|+.....
T Consensus 113 ~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~ 192 (376)
T 2e1m_A 113 SFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRA 192 (376)
T ss_dssp TTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHH
T ss_pred chHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceeccc
Confidence 6544 4455666787655322210 122344455433221
Q ss_pred ---CChHHHhc--cCC------CChHH--HHHHHHHHHHHhhcccC-------CC---ccccc--ccCCCCcHHHHHH-H
Q 013352 120 ---ATDMEALK--SPL------MGIFE--KRRARKFFIYVQDYDEN-------DP---KTHEG--MDLTRVTTRELIA-K 173 (444)
Q Consensus 120 ---~~~~~~~~--~~~------~~~~e--k~~~~~f~~~~~~~~~~-------~~---~~~~~--~~~~~~s~~e~~~-~ 173 (444)
.. ...+. -.+ ..+.+ .+.+.+|+..+...... .+ ..+.. ..++..|+.+|++ +
T Consensus 193 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~S~~~~L~~~ 271 (376)
T 2e1m_A 193 QYATD-PSSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRDFDGYSMGRFLREY 271 (376)
T ss_dssp HHHHC-THHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHHHTTCBHHHHHHHT
T ss_pred ccccC-HHHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHHHHHhCCCHHHHHhhc
Confidence 00 00110 000 01111 12344444443220000 00 00111 1346899999998 7
Q ss_pred cCCChhHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEEEeCCCcchHHHHHHHHHHHcCcEEEcCC
Q 013352 174 YGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNK 253 (444)
Q Consensus 174 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~ 253 (444)
.++++..++++...... +.....+....+. . ...+.+...+..+.||++.|+++|++.+ +..|++|+
T Consensus 272 ~g~s~~~~~~~~~~~~~---~~~~~~s~l~~l~------~-~~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~~ 338 (376)
T 2e1m_A 272 AEFSDEAVEAIGTIENM---TSRLHLAFFHSFL------G-RSDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMGQ 338 (376)
T ss_dssp SCCCHHHHHHHHHHTTC---TTTTTSBHHHHHH------H-CSCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECSE
T ss_pred cCCCHHHHHHHHhhcCc---cccchhhHHHHHH------H-hhhhccCCceEEECCcHHHHHHHHHHhc---CCcEEecC
Confidence 88999888776433322 1111222233221 1 1112134568889999999999999754 56799999
Q ss_pred cceeEEEcCCC
Q 013352 254 PECKVEFDEEG 264 (444)
Q Consensus 254 ~V~~I~~~~~g 264 (444)
+|++|..+++|
T Consensus 339 ~V~~I~~~~~g 349 (376)
T 2e1m_A 339 RMVRLEYYDPG 349 (376)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEECCCc
Confidence 99999984444
No 26
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.68 E-value=5.9e-17 Score=159.75 Aligned_cols=344 Identities=12% Similarity=0.116 Sum_probs=185.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEE-ecccce
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKF 79 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dlgp~~ 79 (444)
|+ ++||+|||||++||++|+.|+++|++|+|+|+++++||++.+.... ..++.+ |.|+++
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~~ 61 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDS------------------ETNVMVHVYGPHI 61 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECT------------------TTCCEEETTSCCC
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccccccc------------------CCCceEeeCCceE
Confidence 54 5899999999999999999999999999999999999999998642 127876 899999
Q ss_pred eecCh-HHHHHHHHcCCcceeEEEEe-CceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccc
Q 013352 80 IIANG-ALVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTH 157 (444)
Q Consensus 80 l~~~~-~l~~~l~~~~~~~~l~~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~ 157 (444)
+.... .+.+.+.+.+.. ... ...+++.+|+.+.+|.+. ..+..-+-..+....+.+++..... ..
T Consensus 62 ~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~g~~~~~P~~~-~~~~~l~~~~~~~~~~~~~l~~~~~---~~---- 128 (384)
T 2bi7_A 62 FHTDNETVWNYVNKHAEM-----MPYVNRVKATVNGQVFSLPINL-HTINQFFSKTCSPDEARALIAEKGD---ST---- 128 (384)
T ss_dssp EEESCHHHHHHHHTTSCE-----EECCCCEEEEETTEEEEESCCH-HHHHHHTTCCCCHHHHHHHHHHHSC---CS----
T ss_pred ECCCCHHHHHHHHHHhhh-----cccccceEEEECCEEEECCCCh-hHHHHHhcccCCHHHHHHHHHHhhh---cc----
Confidence 88654 455555555531 121 233456688999999873 2222100000011223333332211 10
Q ss_pred ccccCCCCcHHHHHHHcCCChhHH-HHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEE-EeCCCcchH
Q 013352 158 EGMDLTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLGEL 234 (444)
Q Consensus 158 ~~~~~~~~s~~e~~~~~~l~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~-~p~gG~~~l 234 (444)
.....++.+|+.+. +.+.+. .++.+.. ..+..+ ..+.++... .++.........+ ....|. +|++|+++|
T Consensus 129 ---~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~-~~~ls~~~~-~r~~~~~~~~~~~-~~~~~~~~p~gG~~~l 201 (384)
T 2bi7_A 129 ---IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQ-PSELPASIL-KRLPVRFNYDDNY-FNHKFQGMPKCGYTQM 201 (384)
T ss_dssp ---CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSC-GGGSBGGGC-CSCCCCSSSCCCS-CCCSEEEEETTHHHHH
T ss_pred ---CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCC-HHHhCHHHH-hcccccccccccc-ccccccEEECcCHHHH
Confidence 12568999999876 555553 4444332 223211 111111110 0000000000111 133454 999999999
Q ss_pred HHHHHHHHHHcCcEEEcCCcce-eEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC--CCcc-ccccc-eeEEEEEE-ecCC
Q 013352 235 PQAFARLSAVYGGTYMLNKPEC-KVEFDEEGKVVGVTSEGETAKCKKVVCDPSY--LPNK-VRKVG-RVARAIAI-MSHP 308 (444)
Q Consensus 235 ~~al~r~~~~~Gg~i~l~~~V~-~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~--~~~~-~~~~~-~~~r~i~i-~~~~ 308 (444)
+++|++ ..|++|++|++|. +|.. .+|+||++... +.++ +.... +-.+.+.+ ++ +
T Consensus 202 ~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~~~~lg~l~y~s~~~v~~~~d-~ 261 (384)
T 2bi7_A 202 IKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFYGYQYGRLGYRTLDFKKFTYQ-G 261 (384)
T ss_dssp HHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHTTTTTCCCCEEEEEEEEEEEE-S
T ss_pred HHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHHHhhcCCCCcceEEEEEEEeC-C
Confidence 999875 4689999999999 8842 18999976432 1121 21111 11111111 23 2
Q ss_pred CCCCCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeeee--
Q 013352 309 IPNTNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIY-- 385 (444)
Q Consensus 309 l~~~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~~-- 385 (444)
... ...++.+|..+.. ... +..++ ..+... .++.++.......- ++ ..+.+.-+.
T Consensus 262 --~~~--~~~~~n~~~~~~~-~~r--i~~~~~~~~~~~-~~~~~v~~e~~~~~-~~-------------~~~p~ypv~~~ 319 (384)
T 2bi7_A 262 --DYQ--GCAVMNYCSVDVP-YTR--ITEHKYFSPWEQ-HDGSVCYKEYSRAC-EE-------------NDIPYYPIRQM 319 (384)
T ss_dssp --CSS--SSSEEEECSTTSS-SSE--EEEGGGGCTTSC-CSEEEEEEEEEEEC-CT-------------TCCCCEECCCH
T ss_pred --CCC--CCEEEEecCCCCC-eee--EEEeeccCCCCC-CCCEEEEEEEeccc-cC-------------CCccccccCCh
Confidence 111 2456778753321 122 23333 223333 35555544433210 00 000010010
Q ss_pred ------eccccCCCCCCCCEEEccC---CCCCCccHHHHHHHHHHHHHhcC
Q 013352 386 ------DRYEPVNEPSLDNCFISTS---YDATTHFESTVTDVLNMYTMITG 427 (444)
Q Consensus 386 ------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 427 (444)
..+.... ....|+++|+. |.. ...|+|+.+++++.+++.+
T Consensus 320 ~~~~~~~~~~~~~-~~~~~~~~~Gr~~~~~~-~~~~d~i~sa~~~a~~~~~ 368 (384)
T 2bi7_A 320 GEMALLEKYLSLA-ENETNITFVGRLGTYRY-LDMDVTIAEALKTAEVYLN 368 (384)
T ss_dssp HHHHHHHHHHHHH-TTCSSEEECHHHHTTCC-CCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-hcCCCEEEccccEEEEe-CCHHHHHHHHHHHHHHHhh
Confidence 0111111 12379999984 455 3569999999999999853
No 27
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.66 E-value=2.3e-16 Score=159.92 Aligned_cols=242 Identities=14% Similarity=0.130 Sum_probs=132.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCC-eEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccce
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~ 79 (444)
|...+||+|||+|++||++|+.|+++|+ +|+|+|+++++||++.+.... ++.+|+|+++
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~--------------------~~~~d~g~~~ 60 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA--------------------GINVELGANW 60 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET--------------------TEEEESSCCE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC--------------------CcEEeeCCeE
Confidence 4567999999999999999999999998 899999999999999998754 7999999999
Q ss_pred eec-----ChHHHHHHHH-cCCcceeEEEEeCceEEEe-CCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccC
Q 013352 80 IIA-----NGALVRVLIH-TDVTKYLYFKAVDGSFVYN-KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEN 152 (444)
Q Consensus 80 l~~-----~~~l~~~l~~-~~~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~ 152 (444)
+.. ..++.+++.+ .++............+++. +|+.+..+.. ...+. +. ..+..|.+.+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~-----~~--~~~~~~~~~~~~~~-- 130 (472)
T 1b37_A 61 VEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYV-QKRIE-----LA--DSVEEMGEKLSATL-- 130 (472)
T ss_dssp EEEESSSSCCTHHHHHHTTSCCCEEECCCTTGGGCEECSSSSBCCHHHH-HHHHH-----HH--HHHHHHHHHHHHTS--
T ss_pred EeccCCCCCCHHHHHHHhhcCCceeeccCccccceeEcCCCCCCCHHHH-HHHHH-----HH--HHHHHHHHHHHHhh--
Confidence 973 2356677766 6765431100001112332 4544322110 00010 01 11222222222111
Q ss_pred CCcccccccCCCCcHHH--HHHHcCC---ChhHHHHHHHHh-hc-ccCCCCCCCchHHHHHHHHHHHHHhhcccCCC-cE
Q 013352 153 DPKTHEGMDLTRVTTRE--LIAKYGL---DDNTIDFIGHAL-AL-HRDDRYLNEPALDTVKRMKLYAESIARFQGGS-PY 224 (444)
Q Consensus 153 ~~~~~~~~~~~~~s~~e--~~~~~~l---~~~~~~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~-~~ 224 (444)
.+. ..++.++.+ ++.+... ......++.... .+ +... ....+....+ .... +..+ +.. -+
T Consensus 131 ~~~-----~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~-~~~~----~~~~-~~~~~~ 198 (472)
T 1b37_A 131 HAS-----GRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEP-PRVTSLQNTV-PLAT----FSDF-GDDVYF 198 (472)
T ss_dssp CTT-----CTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSC-GGGBBSTTTS-SCHH----HHHH-CSEEEE
T ss_pred ccc-----cchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhccc-ccccchhhcc-cccc----cccc-CCceee
Confidence 111 113455543 4443321 111222222111 00 1100 0000000000 0000 1112 222 23
Q ss_pred EEeCCCcchHHHHHHHHHHHc--------CcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 225 IYPLYGLGELPQAFARLSAVY--------GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 225 ~~p~gG~~~l~~al~r~~~~~--------Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
.++.+|++.|+++|++.+... |++|+++++|++|.. .++++. |++ +|+++.||+||++.+
T Consensus 199 ~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~-~~~~v~-v~~~~g~~~~ad~vI~a~~ 267 (472)
T 1b37_A 199 VADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY-SPGGVT-VKTEDNSVYSADYVMVSAS 267 (472)
T ss_dssp ECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE-CSSCEE-EEETTSCEEEESEEEECSC
T ss_pred eecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE-cCCcEE-EEECCCCEEEcCEEEEecC
Confidence 445899999999998876544 789999999999998 556655 666 788999999997643
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.64 E-value=1.1e-16 Score=156.87 Aligned_cols=343 Identities=12% Similarity=0.134 Sum_probs=184.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEe-cccceeec
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVD-MIPKFIIA 82 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-lgp~~l~~ 82 (444)
++||+|||||++||++|++|+++|++|+|+|+++++||++.+...+ ++.+| .|++++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~~G~~~~~~ 60 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCE--------------------GIQIHKYGAHIFHT 60 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEET--------------------TEEEETTSCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccC--------------------CceeeccCCceecC
Confidence 3799999999999999999999999999999999999999998643 78896 99999887
Q ss_pred Ch-HHHHHHHHcCCcceeEEEEeCceEEEeCCeEEEecCChHHHhccCCCChHHHHHHHHHHHHHhhcccCCCccccccc
Q 013352 83 NG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMD 161 (444)
Q Consensus 83 ~~-~l~~~l~~~~~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~ek~~~~~f~~~~~~~~~~~~~~~~~~~ 161 (444)
.. .+.+.+.+.+... .+. .....+.+|+.+.+|.+. ..+.. ++.......+.+|+...... . . .
T Consensus 61 ~~~~~~~~~~~l~~~~--~~~--~~~~~~~~g~~~~~p~~~-~~~~~-l~~~~~~~~~~~~l~~~~~~---~----~--~ 125 (367)
T 1i8t_A 61 NDKYIWDYVNDLVEFN--RFT--NSPLAIYKDKLFNLPFNM-NTFHQ-MWGVKDPQEAQNIINAQKKK---Y----G--D 125 (367)
T ss_dssp SCHHHHHHHHTTSCBC--CCC--CCCEEEETTEEEESSBSH-HHHHH-HHCCCCHHHHHHHHHHHTTT---T----C--C
T ss_pred CCHHHHHHHHHhhhhh--hcc--ccceEEECCeEEEcCCCH-HHHHH-HhccCCHHHHHHHHHHHhhc---c----C--C
Confidence 64 4444444444321 111 223355688888888773 22221 00000122334444433221 1 0 1
Q ss_pred CCCCcHHHHHHHcCCChhHH-HHHHHHh-hcccCCCCCCCchHHHHHHHHHHHHHhhcccCCCcEE-EeCCCcchHHHHH
Q 013352 162 LTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLGELPQAF 238 (444)
Q Consensus 162 ~~~~s~~e~~~~~~l~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~G~~~~~-~p~gG~~~l~~al 238 (444)
....|+.+|+.+. +.+.+. .++.+.. .++..+ ..+.++... .++......-..+ ....|. +|++|+++++++|
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~-~~~lsa~~~-~~l~~~~~~~~~~-~~~~~~~~p~gG~~~l~~~l 201 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRS-AKELPAFII-KRIPVRFTFDNNY-FSDRYQGIPVGGYTKLIEKM 201 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSC-GGGSCTTSS-CCCCBCSSSCCCS-CCCSEEECBTTCHHHHHHHH
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCC-hHHcCHHHH-hhceeeecccccc-ccchhhcccCCCHHHHHHHH
Confidence 1467899998776 555543 3443333 222211 111121111 0000000000011 133454 9999999999998
Q ss_pred HHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC--CCcc-ccccceeEEE---EEE-ecCCCCC
Q 013352 239 ARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY--LPNK-VRKVGRVARA---IAI-MSHPIPN 311 (444)
Q Consensus 239 ~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~--~~~~-~~~~~~~~r~---i~i-~~~~l~~ 311 (444)
++ |++|++|++|.+|.. + | .+.+|+||++.+. +.++ +.+.. .++ +.. ++.+..
T Consensus 202 ~~-----g~~i~l~~~V~~i~~----~---v-----~~~~D~VV~a~p~~~~~~~~l~~l~--y~s~~~v~~~~d~~~~- 261 (367)
T 1i8t_A 202 LE-----GVDVKLGIDFLKDKD----S---L-----ASKAHRIIYTGPIDQYFDYRFGALE--YRSLKFETERHEFPNF- 261 (367)
T ss_dssp HT-----TSEEECSCCGGGSHH----H---H-----HTTEEEEEECSCHHHHTTTTTCCCC--EEEEEEEEEEESSSCS-
T ss_pred hc-----CCEEEeCCceeeech----h---h-----hccCCEEEEeccHHHHHHHhhCCCC--CceEEEEEEEeccccC-
Confidence 75 689999999999852 1 1 2458999977432 1111 11111 222 211 343321
Q ss_pred CCCCCeEEEEeCCCccCCCCcEEEEEeC-CCcccccCCcEEEEEEeecCCCCcccccHhHHhhcCCccceeeeee-----
Q 013352 312 TNDSHSVQVILPQKQLGRRSDMYLFCCS-YSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIY----- 385 (444)
Q Consensus 312 ~~~~~~~~i~~p~~~~~~~~~i~~~~~s-~~~~~~P~G~~~~~~st~~~~~~~~~~l~~~~~~l~~~~~~~~~~~----- 385 (444)
+...++.+|..+.. ... +..++ ..+. |.+++++......+-. + . ....| -+.
T Consensus 262 ---~~~~~~~~~~~~~~-~~r--i~~~~~~~~~--~~~~~~v~~e~~~~~~-~--~----------~~p~y-pv~~~~~~ 319 (367)
T 1i8t_A 262 ---QGNAVINFTDANVP-YTR--IIEHKHFDYV--ETKHTVVTKEYPLEWK-V--G----------DEPYY-PVNDNKNM 319 (367)
T ss_dssp ---SSSSEEEECCTTSS-CSE--EEEGGGGSCC--CCSCEEEEEEEEEECC-T--T----------SCCCE-ECCSHHHH
T ss_pred ---CCCeEEEeCCCCCc-eee--EEeecccCCC--CCCCEEEEEEEecccC-C--C----------Ceeec-ccCChhHH
Confidence 12457788754321 122 22333 2222 3355655444332100 0 0 00001 000
Q ss_pred ---eccccCCCCCCCCEEEccC---CCCCCccHHHHHHHHHHHHHhcCCC
Q 013352 386 ---DRYEPVNEPSLDNCFISTS---YDATTHFESTVTDVLNMYTMITGKV 429 (444)
Q Consensus 386 ---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
..|...-. ...|+++|+. |.. ...|+|+.+++++.+++...|
T Consensus 320 ~~~~~~~~~~~-~~~~~~~~Gr~~~~~y-~~~~d~i~sa~~~a~~~~~~~ 367 (367)
T 1i8t_A 320 ELFKKYRELAS-REDKVIFGGRLAEYKY-YDMHQVISAALYQVKNIMSTD 367 (367)
T ss_dssp HHHHHHHHHHH-HCTTEEECSTTTTTSC-CCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHh-cCCCEEEcccceeeEe-cCHHHHHHHHHHHHHHHhccC
Confidence 01111000 1368999985 455 355999999999999987543
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.44 E-value=1.3e-12 Score=138.96 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=62.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~ 83 (444)
.+||+|||||++||++|+.|+++|++|+|+|+++.+||++.+... ..++.+|+|+.++...
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~-------------------~~G~~vd~Ga~~i~G~ 396 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKS-------------------FKGVTVGRGAQIVNGC 396 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECC-------------------STTCCEESSCCEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccc-------------------cCCeEeccCCeEEeCC
Confidence 579999999999999999999999999999999999999998752 2278899999998653
Q ss_pred --hHHHHHHHHcCCc
Q 013352 84 --GALVRVLIHTDVT 96 (444)
Q Consensus 84 --~~l~~~l~~~~~~ 96 (444)
.++..++.+.++.
T Consensus 397 ~~np~~~l~~~lGl~ 411 (776)
T 4gut_A 397 INNPVALMCEQLGIS 411 (776)
T ss_dssp TTCHHHHHHHHHTCC
T ss_pred ccChHHHHHHHhCCc
Confidence 3555566666764
No 30
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.37 E-value=2.4e-11 Score=130.05 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=60.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
..+||+|||+|++||+||+.|+++|++|+|+|+++++||++.++... ++.+|+|++++..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------~~~~~~G~~~~~~ 336 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKG--------------------NYVADLGAMVVTG 336 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEET--------------------TEEEESSCCEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeeccc--------------------ccchhcCceEecC
Confidence 35799999999999999999999999999999999999999988643 7999999999875
Q ss_pred C-h-HHHHHHHHcCC
Q 013352 83 N-G-ALVRVLIHTDV 95 (444)
Q Consensus 83 ~-~-~l~~~l~~~~~ 95 (444)
. + .+..+..+.++
T Consensus 337 ~~~~~~~~l~~~lg~ 351 (852)
T 2xag_A 337 LGGNPMAVVSKQVNM 351 (852)
T ss_dssp SBTCHHHHHHHHTTC
T ss_pred CCCchHHHHHHHhCC
Confidence 3 2 34334444554
No 31
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.37 E-value=1.6e-12 Score=126.63 Aligned_cols=46 Identities=28% Similarity=0.423 Sum_probs=40.0
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceec
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSL 46 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~ 46 (444)
|++++||||||||++|+++|+.|+++|++|+|+||++.+|+..+..
T Consensus 1 M~~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~ 46 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSR 46 (369)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcC
Confidence 7778999999999999999999999999999999998777665544
No 32
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.37 E-value=8.6e-13 Score=137.73 Aligned_cols=80 Identities=11% Similarity=0.017 Sum_probs=62.7
Q ss_pred cccEEEECCCchHHHHHhhhhcCC--------CeEEEEecCC-CC----------------CccceecchHhHHhhhcCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDG--------LKVLHMDRND-YY----------------GGESSSLNLIQLWKRFRGN 58 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G--------~~VlvlE~~~-~~----------------GG~~~s~~~~~~~~~~~~~ 58 (444)
.++|+|||||++||+||+.|+++| ++|+|+|+++ ++ ||++.+....+ +
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~-------~ 128 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHN-------G 128 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECS-------S
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccC-------C
Confidence 478999999999999999999999 9999999999 99 99999986410 0
Q ss_pred CCCCCCCCCCCCeEEecccceeecCh-HHHHHHHHc-CCc
Q 013352 59 EQPPAHLGSSRDYNVDMIPKFIIANG-ALVRVLIHT-DVT 96 (444)
Q Consensus 59 ~~~~~~~~~~~~~~~dlgp~~l~~~~-~l~~~l~~~-~~~ 96 (444)
.....++.+|+|+.++.... .+.+.+.+. |+.
T Consensus 129 ------~~~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 129 ------DPASGDTIYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp ------CGGGCSEEEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred ------cccCCCcEEecCCEEecCccHHHHHHHHHhcCCc
Confidence 00013689999999887653 455666666 765
No 33
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.36 E-value=4.4e-11 Score=125.94 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=60.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~ 82 (444)
..+||+|||+|++||++|..|+++|++|+|+|+++++||++.++... ++.+|+|++++..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~--------------------~~~~~~G~~~~~~ 165 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKG--------------------NYVADLGAMVVTG 165 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEET--------------------TEEEESSCCEECC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccc--------------------CchhhcCcEEEeC
Confidence 35899999999999999999999999999999999999999998643 7999999999865
Q ss_pred C-h-HHHHHHHHcCC
Q 013352 83 N-G-ALVRVLIHTDV 95 (444)
Q Consensus 83 ~-~-~l~~~l~~~~~ 95 (444)
. + ++..+..+.++
T Consensus 166 ~~~~~~~~l~~~l~~ 180 (662)
T 2z3y_A 166 LGGNPMAVVSKQVNM 180 (662)
T ss_dssp SBTCHHHHHHHHHTC
T ss_pred CCCchHHHHHHHhCc
Confidence 3 2 34344444554
No 34
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.35 E-value=4.9e-12 Score=126.73 Aligned_cols=62 Identities=18% Similarity=0.220 Sum_probs=51.1
Q ss_pred EEEeCC-C---cchHHHHHHHHHHHcCcEEEcCC---cceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 224 YIYPLY-G---LGELPQAFARLSAVYGGTYMLNK---PECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 224 ~~~p~g-G---~~~l~~al~r~~~~~Gg~i~l~~---~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
++.|.. | ...+.++|.+.++..|++|++++ +|++|.. +++++++|++ +|++++||.||.+..
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG 218 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAG 218 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCG
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCC
Confidence 445555 4 35788999999999999999999 9999998 6778888988 677999999886544
No 35
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.29 E-value=3.5e-11 Score=116.42 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=41.0
Q ss_pred ccEEEECCCchHHHHHhhhhc---CCCeEEEEecCCCCCccceecc
Q 013352 5 YDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYYGGESSSLN 47 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~~GG~~~s~~ 47 (444)
+||+|||||++||++|+.|++ +|++|+|+||++.+||++++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~ 47 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTAC 47 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEE
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeee
Confidence 699999999999999999999 9999999999999999998865
No 36
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.28 E-value=4.6e-12 Score=117.29 Aligned_cols=62 Identities=23% Similarity=0.286 Sum_probs=55.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecchHhHHhhhcCCCCCCCCCCCCCCeEEecccceeecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlgp~~l~~~ 83 (444)
++||+|||||++||+||+.|+++|++|+|+||++.+||++++.... ++.+|+|.+.+...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~--------------------~~~~d~g~~~~~~~ 61 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD--------------------AGALDMGAQYFTAR 61 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET--------------------TEEEECSCCCBCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC--------------------CceeecCccccccC
Confidence 3899999999999999999999999999999999999999987654 68899998877655
Q ss_pred hH
Q 013352 84 GA 85 (444)
Q Consensus 84 ~~ 85 (444)
..
T Consensus 62 ~~ 63 (336)
T 3kkj_A 62 DR 63 (336)
T ss_dssp SH
T ss_pred cH
Confidence 43
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.26 E-value=8.3e-11 Score=115.13 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=48.9
Q ss_pred EEEeCCC---cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 013352 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (444)
Q Consensus 224 ~~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~ 287 (444)
.++|..| ...+.++|.+.++..|++|+++++|++|.. ++++ ++|++++.+++||+||.+...
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~-~~V~t~~g~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRR-VDGA-WEVRCDAGSYRAAVLVNAAGA 207 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEE-ETTE-EEEECSSEEEEESEEEECCGG
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE-eCCe-EEEEeCCCEEEcCEEEECCCh
Confidence 3455555 268899999999999999999999999998 4555 678875558999999876554
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.23 E-value=1.8e-10 Score=121.72 Aligned_cols=62 Identities=16% Similarity=0.068 Sum_probs=49.3
Q ss_pred EEEeCCC---cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 013352 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (444)
Q Consensus 224 ~~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~ 287 (444)
..+|.+| ...+.++|.+.++..|++|+++++|++|.. ++++ +.|.+ +|+++.||.||.+...
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~-~~~~-v~V~t~~G~~i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSR-KDDC-WLLNFAGDQQATHSVVVLANGH 471 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE-ETTE-EEEEETTSCEEEESEEEECCGG
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEE-eCCe-EEEEECCCCEEECCEEEECCCc
Confidence 4566665 368899999999999999999999999998 4555 46777 7788999998865443
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.21 E-value=1.4e-10 Score=113.85 Aligned_cols=56 Identities=21% Similarity=0.172 Sum_probs=46.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~ 288 (444)
..+.++|.+.+++.|++++++++|++|.. +++++.+|++++++++||.||.+....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKGIIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCcEEECCEEEECcchh
Confidence 57888899999999999999999999998 567788788855589999998765543
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.20 E-value=3.3e-10 Score=112.44 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=47.9
Q ss_pred EEEeCCCcchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 224 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
..+|......+.++|.+.++..|++++++++|++|.. +++. +.|.++++++.||.||.+..
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~-~~~~-~~V~~~~g~i~ad~VIlAtG 184 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVER-TASG-FRVTTSAGTVDAASLVVASG 184 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE-ETTE-EEEEETTEEEEESEEEECCC
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE-eCCE-EEEEECCcEEEeeEEEECCC
Confidence 4566555678999999999999999999999999987 3443 56777545899999886533
No 41
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.19 E-value=2e-10 Score=110.43 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=42.2
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceecch
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNL 48 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~~~ 48 (444)
++||+|||||++||++|+.|+++|.+|+|+||++.+||++++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~ 46 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS 46 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEec
Confidence 479999999999999999999999999999999999999988754
No 42
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.16 E-value=4.6e-10 Score=121.31 Aligned_cols=64 Identities=22% Similarity=0.251 Sum_probs=51.0
Q ss_pred EEEeCCCc---chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 013352 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (444)
Q Consensus 224 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~ 288 (444)
.++|..|. ..+.++|.+.++..|++|+++++|++|.. +++++++|.+++++++||+||.+....
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADGVIPADIVVSCAGFW 206 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTEEEECSEEEECCGGG
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCcEEECCEEEECCccc
Confidence 34455552 47899999999999999999999999997 567777888865589999998765543
No 43
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.15 E-value=6.9e-10 Score=113.29 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe--CCe--EEEcC-EEEeCCC
Q 013352 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCK-KVVCDPS 286 (444)
Q Consensus 233 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~--~g~--~i~ad-~VI~~~~ 286 (444)
.+.+.|.+.+++.|++|+++++|++|+.++++++++|.. +|+ +++|+ .||.+..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtG 261 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATG 261 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCC
Confidence 799999999999999999999999999844789999876 453 58996 7775533
No 44
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.14 E-value=7.8e-10 Score=109.07 Aligned_cols=62 Identities=21% Similarity=0.175 Sum_probs=46.4
Q ss_pred EEEeCCCc---chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 013352 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (444)
Q Consensus 224 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~ 287 (444)
.+.|..|. ..+.++|.+.+...|++++++++|++|.. +++.+ .|.+++++++||.||.+...
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~-~~~~v-~v~t~~g~i~a~~VV~A~G~ 206 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVP-DADGV-SVTTDRGTYRAGKVVLACGP 206 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEE-ETTEE-EEEESSCEEEEEEEEECCGG
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEE-cCCeE-EEEECCCEEEcCEEEEcCCc
Confidence 34455542 46788999988899999999999999987 44544 46665558999998866543
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.13 E-value=8e-10 Score=116.95 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=48.6
Q ss_pred cEEEeCCCc---chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCe-EEEcCEEEeCCCC
Q 013352 223 PYIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-TAKCKKVVCDPSY 287 (444)
Q Consensus 223 ~~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~-~i~ad~VI~~~~~ 287 (444)
...+|.+|. ..+.++|.+.++..|++|+++++|++|.. ++++ +.|.+ +|+ ++.||.||.+...
T Consensus 400 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~-~~~~-v~V~t~~G~~~i~Ad~VVlAtG~ 467 (689)
T 3pvc_A 400 GIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKR-IDSQ-WQLTFGQSQAAKHHATVILATGH 467 (689)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE-CSSS-EEEEEC-CCCCEEESEEEECCGG
T ss_pred eEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEE-eCCe-EEEEeCCCcEEEECCEEEECCCc
Confidence 355666663 68899999999999999999999999998 4555 45666 666 8999998865443
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.12 E-value=1.2e-09 Score=107.86 Aligned_cols=63 Identities=24% Similarity=0.183 Sum_probs=50.3
Q ss_pred EEEeCCCc---chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 013352 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (444)
Q Consensus 224 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~ 287 (444)
.++|..|. ..+.++|.+.++..|++++++++|++|.. +++++++|.++++++.||.||.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~a~~vV~a~G~ 228 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRGTIHAGKVALAGAG 228 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTCCEEEEEEEECCGG
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCceEECCEEEECCch
Confidence 45566663 37888999999999999999999999998 56777888884348999998876544
No 47
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.08 E-value=2.1e-09 Score=106.16 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=40.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
|++++||||||||++|++||..|+++|.+|+|+|+++.+|+.+.
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 77789999999999999999999999999999999998877553
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.07 E-value=6.5e-10 Score=111.60 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=49.8
Q ss_pred EEEeCCC-cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 224 YIYPLYG-LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 224 ~~~p~gG-~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
..+|..+ ...+.++|.+.++..|++|+++++|++|.. +++++++|.+ +|++++||.||.+..
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtG 188 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVG 188 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCC
Confidence 4566443 467889999999899999999999999997 5677788887 676799999886544
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.02 E-value=1.7e-09 Score=105.46 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=45.3
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 225 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
+.|..| ...+.++|.+.+...|++++++++|++|.. ++++ +.|.+++.+++||.||.+..
T Consensus 139 ~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~-~~v~~~~g~~~a~~vV~a~G 201 (372)
T 2uzz_A 139 FETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRH-DDDG-VTIETADGEYQAKKAIVCAG 201 (372)
T ss_dssp EESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSS-EEEEESSCEEEEEEEEECCG
T ss_pred EeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE-cCCE-EEEEECCCeEEcCEEEEcCC
Confidence 445554 247889999999999999999999999998 4455 45666444699999886544
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.02 E-value=2.6e-09 Score=110.15 Aligned_cols=56 Identities=23% Similarity=0.272 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-C---C--eEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E---G--ETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~---g--~~i~ad~VI~~~~~~ 288 (444)
..+..++.+.++..|++++++++|++|.. +++++++|++ + | .+++||.||.+....
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 57889999999999999999999999998 6788888876 2 3 479999999765543
No 51
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.00 E-value=1.3e-08 Score=105.30 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=44.9
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe---CCe--EEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~---~g~--~i~ad~VI~~~~ 286 (444)
..+.+.|.+.++..|++|+++++|++|..++++++++|.. +|+ ++.||.||.+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtG 314 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATG 314 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCC
Confidence 5788899999999999999999999999843388888765 565 689999886533
No 52
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.98 E-value=1.1e-08 Score=105.60 Aligned_cols=60 Identities=22% Similarity=0.169 Sum_probs=47.5
Q ss_pred EEeCCC---cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCC-CcEEEEEe---CCe--EEEcCEEEeCC
Q 013352 225 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDP 285 (444)
Q Consensus 225 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~-g~v~gV~~---~g~--~i~ad~VI~~~ 285 (444)
.+|..| ...+.+.|.+.++..|++|+++++|++|.. ++ +++++|.. +|+ ++.||.||.+.
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAt 308 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVV-NDDHSVVGAVVHGKHTGYYMIGAKSVVLAT 308 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEE-CTTSBEEEEEEEETTTEEEEEEEEEEEECC
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-CCCCcEEEEEEEeCCCcEEEEEcCEEEEec
Confidence 345544 357889999999999999999999999998 45 88888765 565 68999988653
No 53
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.97 E-value=1.7e-09 Score=106.02 Aligned_cols=62 Identities=11% Similarity=0.060 Sum_probs=48.9
Q ss_pred EEEeCCCc---chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 013352 224 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (444)
Q Consensus 224 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~ 287 (444)
+.+|..|. ..+.++|.+.++..|++++++++|++|.. +++++ +|.++++++.||.||.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~-~v~~~~g~~~a~~vV~A~G~ 217 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVER-DGEAL-FIKTPSGDVWANHVVVASGV 217 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEEC-SSSSE-EEEETTEEEEEEEEEECCGG
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEE-ECCEE-EEEcCCceEEcCEEEECCCh
Confidence 45666663 57889999999999999999999999987 55665 67775558999998866544
No 54
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.96 E-value=8e-09 Score=101.29 Aligned_cols=55 Identities=9% Similarity=0.160 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~ 288 (444)
..+.++|.+.++..|++++++++|++|.. +++. +.|.+++++++||.||.+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDI-SPDS-VKIETANGSYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-CSSC-EEEEETTEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEe-cCCe-EEEEeCCCEEEeCEEEEecCcc
Confidence 57889999999999999999999999998 4444 3466766689999998765543
No 55
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.95 E-value=7.8e-09 Score=103.64 Aligned_cols=56 Identities=14% Similarity=0.213 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEc--------------CCCcEEEEEeCCeEE--EcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFD--------------EEGKVVGVTSEGETA--KCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~--------------~~g~v~gV~~~g~~i--~ad~VI~~~~~ 287 (444)
..+.++|.+.++..|++++++++|++|..+ +++++++|.++++++ .||.||.+...
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECCCc
Confidence 478899999999999999999999999862 355667788743378 99998866543
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.95 E-value=3.2e-09 Score=104.43 Aligned_cols=40 Identities=30% Similarity=0.469 Sum_probs=37.1
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
+++||+|||||++||++|+.|+++|++|+|+|+++.+|+.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~ 42 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 5699999999999999999999999999999999877763
No 57
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.93 E-value=6.9e-09 Score=103.02 Aligned_cols=40 Identities=25% Similarity=0.514 Sum_probs=34.3
Q ss_pred CCC-cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 1 M~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
|++ ++||||||||++||++|+.|+++|.+|+|+|+++.++
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 543 5999999999999999999999999999999987543
No 58
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.88 E-value=8.7e-09 Score=106.45 Aligned_cols=56 Identities=20% Similarity=0.195 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~~~~~ 288 (444)
..+..++.+.++..|++|+.+++|++|.. +++++++|++ +|+ +++||.||.+....
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 46788888888999999999999999998 5677788874 343 79999998765443
No 59
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.87 E-value=2.5e-09 Score=109.25 Aligned_cols=57 Identities=21% Similarity=0.288 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
..+.+.|.+.++..|++|+++++|++|.. +++++++|.+ +|+++.||.||.+....+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 46677888888889999999999999998 6778888888 778899999997765544
No 60
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.82 E-value=5.8e-08 Score=100.49 Aligned_cols=56 Identities=18% Similarity=0.108 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe--CC--eEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EG--ETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~--~g--~~i~ad~VI~~~~~~ 288 (444)
..+.+.|.+.++..|++++.+++|++|.. +++.+++|++ +| .++.||.||.+....
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDL-SDPDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEC-CSTTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE-cCCCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 45666777788889999999999999987 4566667766 56 579999999765543
No 61
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.81 E-value=5.3e-08 Score=100.85 Aligned_cols=53 Identities=21% Similarity=0.193 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~ 284 (444)
..+.++|.+.+...|++|+++++|++|..++++++++|.. +|+ ++.|+.||.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlA 201 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLA 201 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEEC
Confidence 5788899999888999999999999999843688888874 454 6899998854
No 62
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.78 E-value=2.2e-07 Score=96.06 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCC-CcEEEEEe---CCe--EEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~-g~v~gV~~---~g~--~i~ad~VI~~~~ 286 (444)
..+.+.|.+.++..|++|+++++|++|+. ++ +++++|.. +|+ ++.||.||.+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~-~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtG 314 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILE-DASGKVTGVLVKGEYTGYYVIKADAVVIAAG 314 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-C--CCEEEEEEEETTTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEE-CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCC
Confidence 47889999999999999999999999988 45 88888865 464 689999886543
No 63
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.75 E-value=3.1e-09 Score=104.16 Aligned_cols=40 Identities=30% Similarity=0.469 Sum_probs=36.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
++|||||||||++||+||+.|+++|++|+|+||++.+|..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 4699999999999999999999999999999999877653
No 64
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.74 E-value=6.5e-08 Score=100.50 Aligned_cols=52 Identities=21% Similarity=0.314 Sum_probs=43.5
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~ 284 (444)
..+.++|.+.+...|++|+.+++|.+|.. +++++.||.. +|+ ++.|+.||.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlA 212 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIA 212 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEEC
Confidence 47888999988889999999999999998 5788888865 454 6899998854
No 65
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.72 E-value=1.9e-07 Score=97.74 Aligned_cols=52 Identities=17% Similarity=0.151 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~ 284 (444)
..+.++|.+.+...|++|+.+++|.+|.. +++++.||.. +|+ .+.|+.||.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlA 215 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIA 215 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 37889999998889999999999999998 5788888764 454 5899998854
No 66
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.66 E-value=5.6e-08 Score=96.42 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 013352 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (444)
Q Consensus 231 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~~ 290 (444)
..++.+.+.+.++..|++++++++|++|.. +++++.+|.+ +|+++.||.||.+....|.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 357788888888999999999999999987 6778888887 8889999999988776553
No 67
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.65 E-value=1e-07 Score=97.80 Aligned_cols=40 Identities=33% Similarity=0.517 Sum_probs=36.4
Q ss_pred CC-CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 1 MD-EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 1 M~-~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
|+ .++||+|||||++||++|+.|+++|.+|+|+||++..+
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 54 46999999999999999999999999999999987654
No 68
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1.2e-08 Score=97.94 Aligned_cols=43 Identities=26% Similarity=0.263 Sum_probs=38.8
Q ss_pred CcccEEEECCCchHHHHHhhhh--cCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLS--VDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La--~~G~~VlvlE~~~~~GG~~~s 45 (444)
.++||+|||||++||+||++|+ +.|++|+|+||++++||.+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 3689999999999999999997 469999999999999998754
No 69
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.64 E-value=1.5e-08 Score=96.36 Aligned_cols=44 Identities=25% Similarity=0.477 Sum_probs=38.0
Q ss_pred CCC-cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|.+ +|||+|||||.+|++||..|++.|++|+++|++ .+||.+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 654 699999999999999999999999999999985 68887754
No 70
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.61 E-value=3.5e-07 Score=92.87 Aligned_cols=38 Identities=26% Similarity=0.453 Sum_probs=35.0
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
.++||+|||||++||++|..|+++|.+|+|+||++.++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 46899999999999999999999999999999987654
No 71
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.60 E-value=2e-08 Score=95.19 Aligned_cols=41 Identities=20% Similarity=0.145 Sum_probs=35.4
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccc
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 43 (444)
|++|||+|||||.+|++||.+|+++|++|+++|++. +||..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~ 44 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRV 44 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCee
Confidence 468999999999999999999999999999999975 55543
No 72
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.58 E-value=2.4e-08 Score=94.89 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
|.+.|||+|||||.+|++||..|+++|++|+++|++..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 88889999999999999999999999999999999753
No 73
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=6.4e-07 Score=88.42 Aligned_cols=58 Identities=22% Similarity=0.307 Sum_probs=49.3
Q ss_pred cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 231 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
..++.+.+.+.+++.|++++++++|++|.. +++++.+|.+ +|+++.||.||.+....|
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 357788888888999999999999999987 5677888887 788999999998876654
No 74
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.52 E-value=3.3e-08 Score=99.63 Aligned_cols=45 Identities=29% Similarity=0.324 Sum_probs=41.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.+|||+|||||.+|++||..|++.|++|+++||++.+||.|..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 777899999999999999999999999999999999999999764
No 75
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.49 E-value=7.7e-08 Score=93.52 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=36.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
|.+++||||||||++|+++|++|+++|++|+|+||+...+|
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 45679999999999999999999999999999999875444
No 76
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.49 E-value=5.5e-08 Score=98.70 Aligned_cols=45 Identities=27% Similarity=0.448 Sum_probs=39.6
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceec
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSL 46 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~ 46 (444)
+++|||+|||||.+|++||..|++.|++|+++|+++.+||.|...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~ 67 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV 67 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc
Confidence 356999999999999999999999999999999999999987543
No 77
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.48 E-value=5.8e-08 Score=94.26 Aligned_cols=45 Identities=11% Similarity=0.216 Sum_probs=40.5
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||++|+++|..|+++|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 456799999999999999999999999999999999999998754
No 78
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.47 E-value=5.3e-07 Score=90.44 Aligned_cols=56 Identities=7% Similarity=0.114 Sum_probs=44.9
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. +++++ .|.++++++.||.||.+....|
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQEISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSCEEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCCEEEeCEEEECcCCCC
Confidence 56778888888999999999999999986 45665 6777555899999997765544
No 79
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.47 E-value=4e-07 Score=93.09 Aligned_cols=36 Identities=22% Similarity=0.423 Sum_probs=32.4
Q ss_pred CcccEEEECCCchHHHHHhhhhc-CCCeEEEEecCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDY 38 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~ 38 (444)
.+||+||||+|.+|+++|.+|++ .|++|+|||+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36999999999999999999997 6799999999654
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.46 E-value=7e-08 Score=92.56 Aligned_cols=45 Identities=20% Similarity=0.324 Sum_probs=40.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||++|+++|..|+++|++|+++|+++.+||.+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 345799999999999999999999999999999999999998754
No 81
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.46 E-value=1.4e-06 Score=87.73 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=46.3
Q ss_pred cchHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 231 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
..++.+.+.+.++..|++++++++|++|.. +++++..+..+|+++.||.||.+....|
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEEECCCCCc
Confidence 357788888888999999999999999987 5666653334888999999998766544
No 82
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.45 E-value=9.6e-08 Score=94.55 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=35.8
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCe-EEEEecCCCCCc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYYGG 41 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~~~GG 41 (444)
|++++||+|||||++||++|..|+++|.+ |+|+||++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 77889999999999999999999999999 999999987654
No 83
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.41 E-value=1.2e-07 Score=91.36 Aligned_cols=43 Identities=26% Similarity=0.364 Sum_probs=40.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+++||+|||||++|+++|..|+++|++|+++|+++.+||.+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 4699999999999999999999999999999999999998764
No 84
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=1.4e-07 Score=89.74 Aligned_cols=44 Identities=20% Similarity=0.440 Sum_probs=38.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||++|+++|..|+++|++|+++|+ ..+||.+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 55679999999999999999999999999999999 568887654
No 85
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.39 E-value=1.3e-07 Score=95.13 Aligned_cols=44 Identities=30% Similarity=0.410 Sum_probs=38.7
Q ss_pred CCC-cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~-~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|.+ +|||+|||||++|+++|..|+++|++|+++|+ +.+||.|..
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 543 69999999999999999999999999999999 789997753
No 86
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.38 E-value=1.3e-07 Score=95.64 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~ 288 (444)
.++.+.+.+.++..|++++++++|++|.. +++++ .|.+ +|+++.||.||.+....
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~-~~~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQS-TENCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-CSSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEe-eCCEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 46778888888889999999999999987 45554 5666 78899999999776554
No 87
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.36 E-value=1.1e-07 Score=96.09 Aligned_cols=45 Identities=16% Similarity=0.328 Sum_probs=41.6
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 566799999999999999999999999999999999999998754
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.36 E-value=2.5e-07 Score=92.63 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=40.5
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCC--eEEEEecCCCCCcccee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSS 45 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~~~GG~~~s 45 (444)
+..+||+|||||++||++|..|++.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 457999999999999999999999999 99999999999997754
No 89
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.36 E-value=2.1e-07 Score=87.27 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=37.6
Q ss_pred CcccEEEECCCchHHHHHhhhhcC-CCeEEEEecCCCCCccc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGES 43 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG~~ 43 (444)
.++||+|||||++||++|..|+++ |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 358999999999999999999997 99999999999998743
No 90
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.36 E-value=2.8e-07 Score=90.83 Aligned_cols=40 Identities=20% Similarity=0.337 Sum_probs=36.5
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
++++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 3568999999999999999999999999999999887654
No 91
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.35 E-value=1.4e-07 Score=95.53 Aligned_cols=45 Identities=36% Similarity=0.468 Sum_probs=41.5
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||||||||.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 666799999999999999999999999999999999999997643
No 92
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.35 E-value=2.3e-07 Score=88.15 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=37.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
++||+|||||++|+++|..|+++|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999998 8888765
No 93
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.35 E-value=2.2e-07 Score=88.77 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=39.0
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+..+||+|||||++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 34689999999999999999999999999999998 78987754
No 94
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.34 E-value=2.7e-07 Score=94.30 Aligned_cols=45 Identities=31% Similarity=0.432 Sum_probs=41.1
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 445799999999999999999999999999999999989998753
No 95
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.34 E-value=1.9e-07 Score=89.43 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=39.6
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEec----CCCCCccceec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR----NDYYGGESSSL 46 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~----~~~~GG~~~s~ 46 (444)
+.+||+|||||++||++|..|+++|++|+|+|+ +..+||.+...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 568999999999999999999999999999999 45889987654
No 96
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.33 E-value=1.7e-07 Score=89.51 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=39.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
.+||+|||||++|+++|..|+++|++|+++|+++.+||.+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 489999999999999999999999999999999999998853
No 97
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.33 E-value=2.8e-07 Score=93.68 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~~~~~ 288 (444)
..+..+|.+.+.+.|++++++++|++|.. ++ ++++|++ +|+ +++||.||.+....
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~-~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARR-EN-GLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEE-ET-TEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEE-eC-CEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 57889999999999999999999999987 34 5677765 465 79999998765443
No 98
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.33 E-value=2.7e-07 Score=91.14 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=34.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
+++||+|||||++||++|+.|+++|++|+|+||++.++
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46999999999999999999999999999999987654
No 99
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.32 E-value=1.8e-07 Score=93.91 Aligned_cols=38 Identities=32% Similarity=0.553 Sum_probs=35.1
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
+.++||+|||||++||++|..|+++|.+|+|+|+++.+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 34699999999999999999999999999999998764
No 100
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.32 E-value=2.8e-07 Score=92.82 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=40.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||.+|+++|..|++.|++|+++|++ .+||.|..
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 778899999999999999999999999999999998 78998753
No 101
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.31 E-value=1.5e-06 Score=85.85 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. ++++.+|.+ +|+++.||.||.+....|
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 45667777888889999999999999975 345567777 888999999998776654
No 102
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.31 E-value=2.6e-07 Score=93.04 Aligned_cols=44 Identities=20% Similarity=0.383 Sum_probs=39.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|+.++||+|||||.+|+++|..|++.|++|+++|++ .+||.|..
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~ 44 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVN 44 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcC
Confidence 777899999999999999999999999999999998 78998753
No 103
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.31 E-value=2.9e-07 Score=87.92 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=37.2
Q ss_pred cccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCCccc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGES 43 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~~ 43 (444)
++||+|||||++||++|+.|+++ |++|+|+|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999988754
No 104
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.30 E-value=3.1e-07 Score=93.73 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=40.2
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC--------CCCccceec
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND--------YYGGESSSL 46 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~--------~~GG~~~s~ 46 (444)
+.+|||+|||||.+|++||..|++.|++|+++|+++ .+||.|...
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 346999999999999999999999999999999965 799987554
No 105
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.30 E-value=2.7e-07 Score=92.48 Aligned_cols=43 Identities=23% Similarity=0.338 Sum_probs=38.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
|+.++||+|||||.+|++||..|++.|++|+++|++ .+||.|.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 767899999999999999999999999999999998 7899875
No 106
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.27 E-value=4.3e-07 Score=91.70 Aligned_cols=41 Identities=27% Similarity=0.426 Sum_probs=37.0
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC------CCccc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY------YGGES 43 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~------~GG~~ 43 (444)
.+|||+|||||.+|++||..|++.|++|+++|+++. +||.|
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~ 48 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTC 48 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCcc
Confidence 579999999999999999999999999999999974 56655
No 107
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.26 E-value=3.5e-07 Score=92.80 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=37.4
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
+|||+|||||.+|++||..|++.|++|+++|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 5999999999999999999999999999999975 999874
No 108
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.26 E-value=5.5e-07 Score=88.01 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=35.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+||+|||||++||++|..|+++|.+|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 58999999999999999999999999999999988765
No 109
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.25 E-value=4.3e-07 Score=91.48 Aligned_cols=42 Identities=26% Similarity=0.408 Sum_probs=39.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
++||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 589999999999999999999999999999999999998753
No 110
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.25 E-value=3.8e-07 Score=92.19 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=38.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
.+|||+|||||.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 4699999999999999999999999999999976 78998754
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.24 E-value=5.5e-07 Score=81.76 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=33.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
+++||+|||||++|+.+|..|++.|.+|+++|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46999999999999999999999999999999984
No 112
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=4.1e-07 Score=91.93 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CC-eEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG-ETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g-~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..+++++++.|.+ +| +++.||.||.+....|
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 3577778888888999999999999998633443455666 77 7899999997765543
No 113
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.23 E-value=5.9e-07 Score=92.07 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=34.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 43 (444)
++||||||+|++||+||+.|++ |.+|+||||++..||..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 6899999999999999999999 99999999998877654
No 114
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.23 E-value=7.3e-07 Score=90.56 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=36.4
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
|++++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 35679999999999999999999999999999999876643
No 115
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.23 E-value=4.1e-07 Score=86.47 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=38.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
|++++||+|||||++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 45 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTT 45 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEec
Confidence 456799999999999999999999999999999975 78887643
No 116
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.23 E-value=5.5e-07 Score=92.44 Aligned_cols=42 Identities=29% Similarity=0.275 Sum_probs=39.6
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
.++||+|||||++|+++|..|+++|++|+++|+++.+||.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999999874
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=5.8e-07 Score=90.54 Aligned_cols=44 Identities=20% Similarity=0.365 Sum_probs=40.6
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+.++||+|||||++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 35799999999999999999999999999999999999998753
No 118
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.22 E-value=6.1e-07 Score=93.46 Aligned_cols=43 Identities=33% Similarity=0.520 Sum_probs=38.1
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccc
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 43 (444)
|+.+|||||||+|++|+++|..|+++|++|+++|+.+..||.+
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4457999999999999999999999999999999999999855
No 119
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.22 E-value=4.6e-07 Score=87.99 Aligned_cols=43 Identities=16% Similarity=0.255 Sum_probs=38.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCC-eEEEEecCCCCCccceec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSSL 46 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s~ 46 (444)
+++||+|||||++|+++|..|++.|+ +|+++|+++ +||.+..+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~ 46 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW 46 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC
Confidence 36899999999999999999999999 999999999 99876543
No 120
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.22 E-value=5.8e-07 Score=85.37 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=37.6
Q ss_pred CcccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCCccc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGES 43 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~~ 43 (444)
.++||+|||+|++||++|+.|+++ |++|+|+|+++.+||..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 357999999999999999999998 99999999999998744
No 121
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.22 E-value=4e-07 Score=92.43 Aligned_cols=57 Identities=21% Similarity=0.289 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..++++. +.|.+ +|+++.||.||.+....|
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcc
Confidence 3677788888899999999999999998733333 45665 788999999998766544
No 122
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.21 E-value=5.8e-07 Score=88.77 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=39.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcce---------eEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPEC---------KVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~---------~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~ 288 (444)
..+.++|.+.+...|++++++++|+ +|.. +++++ +|.+++.+++||.||.+....
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v-~v~~~~g~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQ-IVVHETRQIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe-eCCeE-EEEECCcEEECCEEEECCCcc
Confidence 5788899999988999999999999 8876 45555 677755589999998765543
No 123
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=5.3e-07 Score=85.32 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=38.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEE-EecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLH-MDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~~~~~GG~~~s 45 (444)
.++||+|||||++||+||..|+++|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 778998754
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.20 E-value=9.9e-07 Score=86.79 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=34.4
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4689999999999999999999999999999998763
No 125
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.20 E-value=6.8e-07 Score=90.55 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=39.7
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEec--------CCCCCccceec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR--------NDYYGGESSSL 46 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~--------~~~~GG~~~s~ 46 (444)
.+|||+|||+|.+|++||..|++.|++|+++|| +..+||.|...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 56 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV 56 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc
Confidence 469999999999999999999999999999998 56799987543
No 126
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.20 E-value=6.4e-07 Score=89.90 Aligned_cols=42 Identities=24% Similarity=0.381 Sum_probs=39.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+|||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 489999999999999999999999999999999999998754
No 127
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.18 E-value=6.3e-07 Score=92.75 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=44.7
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeC----------------CeEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE----------------GETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~----------------g~~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.++..|++|+++++|++|..++++++++|.+. |.+++||.||.+...
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~ 215 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC 215 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC
Confidence 46677788888888999999999999998555778888763 368999999976544
No 128
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.18 E-value=6.8e-07 Score=90.19 Aligned_cols=43 Identities=23% Similarity=0.382 Sum_probs=39.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
.++||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 3689999999999999999999999999999999999998753
No 129
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.16 E-value=8.4e-07 Score=91.04 Aligned_cols=44 Identities=25% Similarity=0.322 Sum_probs=40.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccceec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSL 46 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s~ 46 (444)
.++||||||||++|+.+|..|++.|++|+|+|+++.+||.+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~ 63 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWN 63 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC
Confidence 35899999999999999999999999999999999999977543
No 130
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.16 E-value=7.9e-07 Score=85.30 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=38.2
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+..+||+|||||++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 45689999999999999999999999999999985 78887643
No 131
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.16 E-value=9.1e-07 Score=87.01 Aligned_cols=55 Identities=13% Similarity=0.061 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHHc-CcEEEcCCcceeEEEcCCCcEE-EEEe-CCeEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVV-GVTS-EGETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~g~v~-gV~~-~g~~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.+... |++++++++|++|.. ++++++ .|++ +|++++||.||.+...
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~-~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQR-DERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEE-CTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEE-cCCceEEEEEECCCCEEECCEEEECCCC
Confidence 34556677777777 899999999999988 445543 4666 7789999999976544
No 132
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.16 E-value=8.6e-07 Score=88.85 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=39.1
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
+.+||+|||+|++||++|..|++.|++|+|+|+++++||.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 358999999999999999999999999999999999999753
No 133
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.16 E-value=9.8e-07 Score=89.94 Aligned_cols=55 Identities=24% Similarity=0.210 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe---CC--eEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EG--ETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~---~g--~~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.+...|++++++++|++|.. +++++.+|++ +| .+++||.||.+...
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGN 170 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCc
Confidence 35666777778889999999999999998 6777777764 46 38999999965443
No 134
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.15 E-value=9.1e-07 Score=93.49 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=40.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
..+||+|||||++||+||..|+++|++|+|+|+++++||.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 4589999999999999999999999999999999999998764
No 135
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.15 E-value=1.1e-06 Score=82.27 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=34.7
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
++||+|||||++|+++|..|+++|++|+++|+++..|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~ 39 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR 39 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc
Confidence 38999999999999999999999999999999875554
No 136
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.14 E-value=1.1e-06 Score=90.01 Aligned_cols=42 Identities=26% Similarity=0.455 Sum_probs=39.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
.++||||||||++|+.+|..|++.|++|+|+|+++.+||.+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 358999999999999999999999999999999999999875
No 137
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.13 E-value=8.9e-07 Score=89.07 Aligned_cols=42 Identities=29% Similarity=0.478 Sum_probs=38.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+++||+|||||++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 3699999999999999999999999999999998 78887643
No 138
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.13 E-value=7.1e-07 Score=85.38 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=38.4
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEec----CCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR----NDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~----~~~~GG~~~s 45 (444)
.++||+|||||++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 358999999999999999999999999999999 6778887644
No 139
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.13 E-value=1.1e-06 Score=90.02 Aligned_cols=43 Identities=26% Similarity=0.282 Sum_probs=39.8
Q ss_pred cccEEEECCCchHHHHHhhhh-cCCCeEEEEecCCCCCccceec
Q 013352 4 EYDVIVLGTGLKECILSGLLS-VDGLKVLHMDRNDYYGGESSSL 46 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La-~~G~~VlvlE~~~~~GG~~~s~ 46 (444)
++||||||||++|+++|..|+ +.|++|+|+|+++.+||.+...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~ 51 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN 51 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc
Confidence 589999999999999999999 9999999999999999977543
No 140
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.13 E-value=1.6e-06 Score=88.03 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=36.8
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
..+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 4689999999999999999999999999999999888753
No 141
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.11 E-value=9.2e-07 Score=85.40 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=33.2
Q ss_pred cEEEECCCchHHHHHhhhhcCC------CeEEEEecCCCCCc
Q 013352 6 DVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGG 41 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G------~~VlvlE~~~~~GG 41 (444)
||||||||++||++|+.|+++| .+|+|||++...+|
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 8999999999999999999998 99999999875544
No 142
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.11 E-value=1.2e-06 Score=85.93 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=33.2
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
++||+|||||++||++|..|+++|.+|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 48999999999999999999999999999999875
No 143
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.11 E-value=1.4e-06 Score=88.08 Aligned_cols=44 Identities=25% Similarity=0.376 Sum_probs=38.0
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecC-------C--CCCccceec
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-------D--YYGGESSSL 46 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~-------~--~~GG~~~s~ 46 (444)
.+|||+|||||.+|++||..|++.|++|+++||+ + .+||.|...
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~ 60 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNV 60 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeeccc
Confidence 4699999999999999999999999999999942 1 389988543
No 144
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.11 E-value=1.7e-06 Score=88.66 Aligned_cols=54 Identities=13% Similarity=0.207 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
..+.+.|.+.+...|++++.+ +|++|..++++.+++|.+ +|+++.||.||.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G 219 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSG 219 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCC
Confidence 577788888888899999999 899998755666677877 677899999996544
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.11 E-value=1.1e-06 Score=88.52 Aligned_cols=40 Identities=35% Similarity=0.469 Sum_probs=37.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
++||||||||.+|++||..|++.|++|+++|+++ +||.|.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 6999999999999999999999999999999988 898764
No 146
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.11 E-value=1.6e-06 Score=89.44 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
++||||||||++||++|+.|+++|.+|+||||++.++
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 5899999999999999999999999999999987654
No 147
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=1.7e-06 Score=81.89 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=36.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCCCCCcccee
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSS 45 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~~s 45 (444)
|||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 67887654
No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.09 E-value=1.3e-06 Score=88.45 Aligned_cols=57 Identities=19% Similarity=0.202 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..++++. +.|.+ +|+++.||.||.+....|
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 3677888888899999999999999998733333 45665 777899999998765543
No 149
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.09 E-value=1.6e-06 Score=89.08 Aligned_cols=38 Identities=26% Similarity=0.212 Sum_probs=35.4
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 58999999999999999999999999999999987654
No 150
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.09 E-value=1.8e-06 Score=86.88 Aligned_cols=41 Identities=15% Similarity=0.329 Sum_probs=38.8
Q ss_pred ccEEEECCCchHHHHHhhhhc---CCCe---EEEEecCCCCCcccee
Q 013352 5 YDVIVLGTGLKECILSGLLSV---DGLK---VLHMDRNDYYGGESSS 45 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~---~G~~---VlvlE~~~~~GG~~~s 45 (444)
+||+|||||++|++||..|++ .|.+ |+++|+++.+||.|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998764
No 151
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=1.6e-06 Score=86.94 Aligned_cols=41 Identities=22% Similarity=0.269 Sum_probs=38.0
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
.+|||+|||||.+|++||..|++.|++|+++|++ .+||.|.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 3689999999999999999999999999999998 7898774
No 152
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.06 E-value=2.2e-06 Score=89.68 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=35.1
Q ss_pred CcccEEEECCCchHHHHHhhhhc-CCCeEEEEecCCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYG 40 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~G 40 (444)
.++||+|||||++||++|+.|++ .|.+|+|+||++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999987654
No 153
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.06 E-value=1.3e-06 Score=88.76 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 233 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
++.+.+.+.++..|++++++++|++|.. +++++ .|.+ +|+++.||.||.+....|
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~-~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTR-TGAGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEE-CSSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEE-eCCEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 6778888888999999999999999987 44444 4555 778899999997655443
No 154
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.06 E-value=2.1e-06 Score=84.31 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 6999999999999999999999999999997654
No 155
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.05 E-value=1.9e-06 Score=88.92 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=35.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC-CCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~-~~GG 41 (444)
.+|||||||||++|+.||+.|++.|.+|+++|++. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 46999999999999999999999999999999985 4554
No 156
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.1e-06 Score=87.23 Aligned_cols=57 Identities=5% Similarity=0.018 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeE-EEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGET-AKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~-i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..++++. +.|.+ +|++ +.||.||.+....|
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCc
Confidence 4677888888899999999999999998633343 34555 7777 99999998766554
No 157
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1.5e-06 Score=87.22 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=38.7
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
.++||+|||||.+|++||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 358999999999999999999999999999999 789998763
No 158
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.03 E-value=2.4e-06 Score=87.87 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHH-cCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 233 ~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
.+.+.|.+.++. .|+++ ++++|++|.. +++++++|.+ +|.++.||.||.+..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG 177 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTG 177 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCT
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccC
Confidence 456677777766 48888 6889999988 6788888988 788999999886544
No 159
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.03 E-value=1.7e-06 Score=88.61 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=34.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+||+||||+|.+|+++|.+|++ |.+|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999876543
No 160
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.02 E-value=2.3e-06 Score=87.36 Aligned_cols=56 Identities=9% Similarity=-0.028 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|..+++++.|+++.. .++++. |.. +++++.+|.|+.+....|
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~-~~~~~~-v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK-MDDKIL-VEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-ETTEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe-cCCeEE-EEEcCCCeEEEEEEEEcccccC
Confidence 57888888999999999999999999987 455443 544 778889999987755443
No 161
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.01 E-value=2.3e-06 Score=85.16 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=32.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999976
No 162
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.01 E-value=3.2e-06 Score=87.04 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC-CeEEEEecCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDY 38 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~~ 38 (444)
++||+||||||.+||++|.+|++.| .+|+||||.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 5799999999999999999999998 69999999765
No 163
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.00 E-value=2.8e-06 Score=87.74 Aligned_cols=52 Identities=19% Similarity=0.117 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHH-cCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 233 ~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
.+.+.|.+.++. .|+++ ++++|++|.. +++++++|.+ +|.++.||.||.+..
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATG 178 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVG 178 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCC
Confidence 456677777776 58888 6789999988 6788888988 788899999886533
No 164
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.99 E-value=3.3e-06 Score=89.73 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=39.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
.+||+|||||.+|++||..|+++|++|+|+|+++++||.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 579999999999999999999999999999999999998754
No 165
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.99 E-value=3.9e-06 Score=86.28 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=45.0
Q ss_pred chHHHHHHHHHHHc-CcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.++.. |++++++ +|++|..++++.+++|.+ +|+++.||.||.+...
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~ 250 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCC
Confidence 46788888888888 9999999 999998755677778877 7778999999966443
No 166
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=3.7e-06 Score=79.43 Aligned_cols=39 Identities=23% Similarity=0.448 Sum_probs=35.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
+|||+|||||++|+++|..|+++|++|+++|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 4788765
No 167
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.98 E-value=3.3e-06 Score=82.58 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=32.6
Q ss_pred cEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYY 39 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~ 39 (444)
||+|||||++||++|..|+++ |.+|+|+||++.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999999 9999999998876
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.97 E-value=4e-06 Score=84.41 Aligned_cols=51 Identities=20% Similarity=0.310 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe--CCeEEEcCEEEeC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGETAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~--~g~~i~ad~VI~~ 284 (444)
.++.+.|.+.++..|++++.+++| +|.. +++++.+|.. +++++.||.||.+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~~~g~~~a~~VVlA 171 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEKRGLVEDVDKLVLA 171 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETTTEEECCCSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEeCCCeEEeeeEEEC
Confidence 467888888888889999999999 9987 5678888765 3456889998864
No 169
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.96 E-value=3.2e-06 Score=87.67 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHcC-cEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeCC
Q 013352 232 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDP 285 (444)
Q Consensus 232 ~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~~ 285 (444)
..+.++|.+.+...| ++++++++|++|.. +++++.+|.. +|+ ++.|+.||.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 478888888888888 99999999999998 5778877753 566 68999988643
No 170
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=5.2e-06 Score=80.03 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=35.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~ 43 (444)
+||+|||||++|+.||..|+++|++|+++|+++..+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999988655443
No 171
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.96 E-value=4.3e-06 Score=72.42 Aligned_cols=33 Identities=39% Similarity=0.539 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|||+|||||++|+.+|..|++.|.+|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999986
No 172
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.96 E-value=3.5e-06 Score=86.11 Aligned_cols=54 Identities=7% Similarity=0.109 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHH-cCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~ 286 (444)
..+.+.|.+.+.. .|++++.+ .|++|..++++.+++|++ +|+++.||.||.+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG 230 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTG 230 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCC
Confidence 4677788888888 89999999 599998754666677777 667899999996543
No 173
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.95 E-value=2.4e-06 Score=86.62 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=38.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
++||+|||+|++|+++|..|+++ ++|+|+|+++++||.+..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 57999999999999999999999 999999999999998764
No 174
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.94 E-value=3.1e-06 Score=92.61 Aligned_cols=41 Identities=27% Similarity=0.347 Sum_probs=39.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
++||||||+|.+|++||..|++.|++|+|+|+++++||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999887
No 175
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.93 E-value=4.4e-06 Score=87.31 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=41.7
Q ss_pred chHHHHHHHHHHHc--CcEEEcCCcceeEEEcCC--CcEEEEEe----CCe--EEEcCEEEeC
Q 013352 232 GELPQAFARLSAVY--GGTYMLNKPECKVEFDEE--GKVVGVTS----EGE--TAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~--Gg~i~l~~~V~~I~~~~~--g~v~gV~~----~g~--~i~ad~VI~~ 284 (444)
..+.++|.+.+... |++|+.++.|.+|+.+++ |++.||.. +|+ .+.|+.||.+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLA 228 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVA 228 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEEC
Confidence 46778888888777 999999999999998433 38999864 343 6899998854
No 176
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.92 E-value=6.6e-06 Score=86.61 Aligned_cols=42 Identities=19% Similarity=0.286 Sum_probs=39.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
..+||+|||||.+|+.||..|+++|++|+++|++++.||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 358999999999999999999999999999999999999764
No 177
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.91 E-value=4.1e-06 Score=84.07 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=37.1
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC-----CeEEEEecCCCCCccc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG-----LKVLHMDRNDYYGGES 43 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G-----~~VlvlE~~~~~GG~~ 43 (444)
..+||||||||++|+++|..|++.| .+|+++|+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 3579999999999999999999999 9999999999988443
No 178
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.90 E-value=6.5e-06 Score=84.51 Aligned_cols=37 Identities=35% Similarity=0.477 Sum_probs=34.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
.+||+||||+|.+|+++|.+|+++|++|++||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998754
No 179
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.88 E-value=7e-06 Score=85.85 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHHc-Cc-EEEcCCcceeEEEcCCC---cEEEEEe----CCe--EEEcCEEEeC
Q 013352 232 GELPQAFARLSAVY-GG-TYMLNKPECKVEFDEEG---KVVGVTS----EGE--TAKCKKVVCD 284 (444)
Q Consensus 232 ~~l~~al~r~~~~~-Gg-~i~l~~~V~~I~~~~~g---~v~gV~~----~g~--~i~ad~VI~~ 284 (444)
..+.+.|.+.+... |+ +|+.+++|++|.. +++ +++||.. +|+ ++.|+.||.+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~-~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlA 213 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLK-DNNDPNAVAGAVGFSVREPKFYVFKAKAVILA 213 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEE-CTTCTTBEEEEEEEESSSSCEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEE-cCCccceeEEEEEEEecCCcEEEEEcCEEEEC
Confidence 35677777777777 99 9999999999998 455 8888863 454 6899998854
No 180
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.87 E-value=4.9e-06 Score=83.36 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=38.8
Q ss_pred CcccEEEECCCchHHHHHhhhhc-C------CCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV-D------GLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~------G~~VlvlE~~~~~GG~~~ 44 (444)
..+||+|||||.+|+.||..|++ . |++|+++|+++++||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 46899999999999999999999 7 999999999999999763
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.84 E-value=1e-05 Score=80.47 Aligned_cols=58 Identities=17% Similarity=0.293 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEc-CCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFD-EEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~-~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..+ +++++.+|.+ +|+++.||.||.+....|
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 467778888888999999999999999752 3466767777 788999999998766544
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.84 E-value=5.6e-06 Score=84.24 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=44.7
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.+...|++++.+ +|++|..++++.+++|++ +|+++.||.||.+...
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGF 228 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCc
Confidence 467788888888899999999 999998755677777877 6778999999966443
No 183
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.84 E-value=8.2e-06 Score=83.95 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=32.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcC-CCeEEEEecCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~ 37 (444)
++||+||||||.+||++|.+|++. |.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 579999999999999999999974 89999999986
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.81 E-value=9.3e-06 Score=84.33 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=36.7
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecC-C-------CCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-D-------YYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~-~-------~~GG~~~ 44 (444)
..|||+|||||.+|++||..|++.|++|+++|+. + .+||.|.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~ 155 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCV 155 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHH
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEe
Confidence 4689999999999999999999999999999983 3 4788653
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.80 E-value=1.2e-05 Score=82.10 Aligned_cols=40 Identities=23% Similarity=0.476 Sum_probs=36.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~ 44 (444)
..+||+|||||++|++||.+|+++|++|+++|+ .+||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999986 5788765
No 186
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.79 E-value=1.2e-05 Score=78.60 Aligned_cols=56 Identities=16% Similarity=0.153 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. +++. +.|.+ +|+++.||.||.+....|
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKK-AGEG-LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEE-ETTE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEe-cCCE-EEEEECCCCEEECCEEEECcCCCc
Confidence 45778888888889999999999999986 3443 45555 788999999998766544
No 187
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.78 E-value=1.3e-05 Score=88.38 Aligned_cols=40 Identities=23% Similarity=0.439 Sum_probs=37.9
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecCCCCCccc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGES 43 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~GG~~ 43 (444)
.+||+|||||.+|++||..|++.|+ +|+|+|+++++||.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 5799999999999999999999999 799999999999975
No 188
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.77 E-value=1.2e-05 Score=80.37 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++.. +++++++.|.+|.. + +++..+..+|+++.||.||.+....|
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~-~-~~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEG-E-ERVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEEC-S-SSCCEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEec-c-CcEEEEEeCCCEEECCEEEEeeCCcc
Confidence 35667777777777 99999999999975 3 35555667889999999998766543
No 189
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.76 E-value=1.1e-05 Score=82.86 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=34.3
Q ss_pred cccEEEECCCchHHHHHhhhhc-CCCeEEEEecCCCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYG 40 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~G 40 (444)
+||+||||+|.+||++|.+|++ .|.+|+|||+.+..+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~ 39 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDE 39 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCccc
Confidence 6999999999999999999998 799999999987663
No 190
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.74 E-value=1.4e-05 Score=84.01 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=33.6
Q ss_pred cccEEEECCCchHHHHHhhhhc-----CCCeEEEEecCCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSV-----DGLKVLHMDRNDYY 39 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~-----~G~~VlvlE~~~~~ 39 (444)
++||+|||||++||++|..|++ .|.+|+|+||++..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 6899999999999999999999 99999999998653
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.70 E-value=1.6e-05 Score=79.00 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=36.2
Q ss_pred ccEEEECCCchHHHHHhhhhc--CCCeEEEEecCCCCCccc
Q 013352 5 YDVIVLGTGLKECILSGLLSV--DGLKVLHMDRNDYYGGES 43 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~--~G~~VlvlE~~~~~GG~~ 43 (444)
.||||||||++|+++|..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 689999999999999999999 899999999999887754
No 192
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.69 E-value=1.8e-05 Score=79.33 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=38.1
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC--CeEEEEecCCCCCccce
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGESS 44 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~~~ 44 (444)
..+||+|||+|++|+.+|..|++.| ++|+++|+++++||.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3589999999999999999999998 99999999999998763
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.68 E-value=2.1e-05 Score=79.70 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. +++++ .|.+ +|+++.||.||.+....|
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~-~~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGV-SSGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEE-ETTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-cCCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 35677788888899999999999999986 34443 5666 888999999998766544
No 194
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.68 E-value=1.8e-05 Score=78.75 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=36.1
Q ss_pred CCCcccEEEECCCchHHHHHhhhhc---CCCeEEEEecCCCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYY 39 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~~ 39 (444)
|....||||||||.+|+++|..|++ .|++|+|+|++++.
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 6667899999999999999999999 89999999999864
No 195
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.67 E-value=2.3e-05 Score=79.55 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=34.9
Q ss_pred CCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 2 ~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..+||+||||+|.+|+++|.+|++.|++|+++|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999999999999999998654
No 196
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.66 E-value=2.4e-05 Score=79.43 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=35.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
.+||+||||+|.+|+++|.+|++.|++|+++|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46999999999999999999999999999999988665
No 197
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.63 E-value=2.6e-05 Score=77.98 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.+++.|++++++++|++|.. +++++..+.++|+++.||.||.+....|
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEeCCCEEECCEEEECcCCCC
Confidence 46778888888999999999999999986 4666666777888999999998765543
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.62 E-value=3.2e-05 Score=76.29 Aligned_cols=52 Identities=23% Similarity=0.230 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|. + + .|++ +|+++.||.||.+....|
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCc
Confidence 3567778888889999999999999997 2 3 4555 788999999998766554
No 199
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.60 E-value=3.1e-05 Score=80.21 Aligned_cols=53 Identities=8% Similarity=-0.054 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~ 288 (444)
.++.+.+.+.++..|++++++++|++|.. +++ +|.+ +|+++.||.||.+....
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEE-NGA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEG-GGT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEec-CCC---EEEECCCCEEEcCEEEEccCCC
Confidence 46778888888999999999999999975 333 3455 78899999999775543
No 200
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.60 E-value=3.7e-05 Score=78.76 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=35.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcC-CCeEEEEecCCCCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG 41 (444)
.+||+||||+|.+|+++|.+|+++ |.+|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 469999999999999999999998 899999999876643
No 201
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.59 E-value=2.2e-05 Score=77.33 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
..+.+.+.+.+++.|++++++++|++|.. ++ |.+ +|+++.||.||.++...|
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCCCc
Confidence 46777888888999999999999999853 22 444 888999999998766544
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.54 E-value=3.5e-05 Score=77.94 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=44.7
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.+++.|++++++++|++|.. ++++..|.++|+++.||.||.+....|
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITDKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEESSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEECCcEEECCEEEECCCCCc
Confidence 46777888888899999999999999974 455555667888999999998766543
No 203
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.54 E-value=4.6e-05 Score=78.75 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=34.1
Q ss_pred CcccEEEECCCchHHHHHhhhhc-CCCeEEEEecCCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYY 39 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE~~~~~ 39 (444)
.+||+||||+|.+|+++|.+|++ .|++|++||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 89999999998654
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.52 E-value=4.4e-05 Score=76.18 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. + +++..|.++|+++.||.||.+....|
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG-D-GRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC-S-SBCCEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc-c-CcEEEEEECCCEEECCEEEECcCCCC
Confidence 46777888888889999999999999975 3 55555667788899999997765443
No 205
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.48 E-value=5.4e-05 Score=76.30 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|.. + +++..+.++++++.||.||.+....|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~-~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG-N-ERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-S-SBEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc-C-CcEEEEEECCCEEEcCEEEECcCCCc
Confidence 46777888888899999999999999986 3 55666777778899999997766543
No 206
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.47 E-value=6.7e-05 Score=72.83 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=32.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
.||+|||||.+|++||..|++.| +|+++|++++.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 58999999999999999999999 999999988653
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.39 E-value=7.8e-05 Score=76.73 Aligned_cols=36 Identities=8% Similarity=0.201 Sum_probs=33.9
Q ss_pred ccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~G 40 (444)
.||+|||||++|++||..|++. |++|+++|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999988 89999999999887
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.24 E-value=0.00022 Score=69.67 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=35.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
+...|+|||||++|++||..|...|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 357899999999999999999888999999999998774
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.22 E-value=0.00018 Score=72.79 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=32.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
+.+|||||||.+|+.+|..|++.+++|+|+|++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45799999999999999999999999999999986
No 210
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.11 E-value=0.00027 Score=70.21 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|+++.. .. |.+ +|+++.||.||.+....|
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~~---v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING---NE---ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET---TE---EEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC---Ce---eeecCCeEEeeeeEEEEeceec
Confidence 46677788888999999999999998753 22 444 889999999997755443
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.08 E-value=0.00023 Score=69.77 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=32.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCC--CeEEEEecCCCCCcc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~ 42 (444)
.+|||||||.+|++||.+|.+.| .+|+|+|++++...+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 46999999999999999998876 589999999875433
No 212
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.08 E-value=0.00024 Score=70.49 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCC--CeEEEEecCCCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYY 39 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~ 39 (444)
|.+ +|||||||.+|++||..|++.+ .+|+|+|++++.
T Consensus 1 M~K--~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 1 MAK--HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp -CC--EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCC--cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 543 6999999999999999999866 799999999863
No 213
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.94 E-value=0.00011 Score=74.31 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=27.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
+.|||||||+|.+||++|++|.++|...+++|+.+..|+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQP 77 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCc
Confidence 3489999999999999999998876554444444444443
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.83 E-value=0.0064 Score=60.36 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=35.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..+++|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 46899999999999999999999999999999987655
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.77 E-value=0.0058 Score=59.45 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=35.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999887654
No 216
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.66 E-value=0.0085 Score=49.13 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.|+|||.|-.|..+|..|.+.|++|+++|+++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999975
No 217
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.64 E-value=0.0088 Score=55.49 Aligned_cols=37 Identities=30% Similarity=0.334 Sum_probs=33.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|++...|.|||+|..|...|..|+++|++|+++|+++
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 6666689999999999999999999999999999975
No 218
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.64 E-value=0.0079 Score=50.26 Aligned_cols=33 Identities=24% Similarity=0.498 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|..|+.+|..|.+.|++|+++|+++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999974
No 219
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.62 E-value=0.0096 Score=48.71 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|+|+|-.|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999964
No 220
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.59 E-value=0.011 Score=49.08 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=31.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999963
No 221
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.56 E-value=0.0091 Score=55.93 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=33.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+=+|..|++.|.+|+++|+.+..-
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 469999999999999999999999999999987653
No 222
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.53 E-value=0.01 Score=48.13 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|..|..+|..|++.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 223
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.30 E-value=0.01 Score=59.10 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=34.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999987754
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.23 E-value=0.013 Score=58.38 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=33.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999887644
No 225
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.23 E-value=0.014 Score=56.50 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=35.1
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
..+++|||+|..|+-+|..|++.|.+|+++|+++.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 357999999999999999999999999999998876554
No 226
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.15 E-value=0.014 Score=58.01 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=34.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999887654
No 227
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.12 E-value=0.014 Score=58.02 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=33.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+++.+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l 203 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc
Confidence 469999999999999999999999999999988754
No 228
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.10 E-value=0.013 Score=56.45 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=34.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999987655
No 229
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.09 E-value=0.016 Score=58.08 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=34.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 220 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc
Confidence 4699999999999999999999999999999988765
No 230
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.92 E-value=0.018 Score=53.69 Aligned_cols=34 Identities=26% Similarity=0.237 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 4699999999999999999999999999998654
No 231
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.91 E-value=0.016 Score=54.59 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.|.|||||..|...|..++.+|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 232
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.87 E-value=0.021 Score=44.73 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCC-CeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 37 (444)
..|+|+|+|..|..++..|.+.| ++|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 9999999863
No 233
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.78 E-value=0.023 Score=55.67 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=34.9
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
..+|+|||+|..|+-+|..|++.|.+|+++|+++.+..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 357999999999999999999999999999999876543
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.78 E-value=0.02 Score=56.87 Aligned_cols=37 Identities=24% Similarity=0.181 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4699999999999999999999999999999887643
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.76 E-value=0.019 Score=54.89 Aligned_cols=37 Identities=30% Similarity=0.348 Sum_probs=31.5
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|++...|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5556689999999999999999999999999999863
No 236
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.54 E-value=0.028 Score=52.37 Aligned_cols=35 Identities=11% Similarity=-0.069 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
...|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999865
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.45 E-value=0.026 Score=56.21 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=33.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+++.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 469999999999999999999999999999987754
No 238
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.44 E-value=0.031 Score=52.20 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999999999999874
No 239
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.41 E-value=0.024 Score=48.61 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred ccEEEECCCchHHHHHhhhhcC-CCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~ 37 (444)
-.|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3699999999999999999999 99999999975
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.31 E-value=0.028 Score=45.68 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|-.|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 241
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.28 E-value=0.021 Score=57.23 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=34.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..+|+|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 45799999999999999999999999999999877654
No 242
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.25 E-value=0.032 Score=52.68 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 369999999999999999999999999999975
No 243
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.23 E-value=0.031 Score=52.72 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=33.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
|.....|.|||+|..|...|..|+++|+ +|+++|++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 6666789999999999999999999998 999999975
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.23 E-value=0.032 Score=56.03 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+++.+-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 5699999999999999999999999999999887644
No 245
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.22 E-value=0.032 Score=52.45 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 369999999999999999999999999999975
No 246
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.19 E-value=0.034 Score=55.47 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=34.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4699999999999999999999999999999987654
No 247
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.10 E-value=0.037 Score=54.52 Aligned_cols=37 Identities=14% Similarity=0.129 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 186 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE 186 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 5799999999999999999999999999999887644
No 248
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.08 E-value=0.035 Score=55.25 Aligned_cols=37 Identities=16% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999887643
No 249
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.07 E-value=0.029 Score=56.21 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999887643
No 250
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.00 E-value=0.038 Score=55.47 Aligned_cols=37 Identities=27% Similarity=0.251 Sum_probs=34.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN 211 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4699999999999999999999999999999988654
No 251
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.93 E-value=0.042 Score=51.17 Aligned_cols=35 Identities=29% Similarity=0.224 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 56999999999999999999999999999998776
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.91 E-value=0.036 Score=52.25 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 569999999999999999999999999999875
No 253
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.87 E-value=0.041 Score=53.79 Aligned_cols=39 Identities=21% Similarity=0.286 Sum_probs=34.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 357999999999999999999999999999999876543
No 254
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.86 E-value=0.034 Score=49.18 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=30.1
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|+|||+|-.|..+|..|.++|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999864
No 255
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.83 E-value=0.044 Score=55.75 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999875
No 256
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.80 E-value=0.037 Score=52.87 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 3699999999999999999999999999999764
No 257
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.78 E-value=0.048 Score=54.02 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=34.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
.+++|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999998876543
No 258
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.75 E-value=0.045 Score=55.09 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4699999999999999999999999999999887643
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.69 E-value=0.046 Score=50.85 Aligned_cols=35 Identities=17% Similarity=-0.049 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 46999999999999999999999999999998876
No 260
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.68 E-value=0.05 Score=53.96 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=31.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||.|.+|+++|..|.++|++|++.|+++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 5799999999999999999999999999999763
No 261
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.66 E-value=0.046 Score=54.70 Aligned_cols=36 Identities=22% Similarity=0.236 Sum_probs=33.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..++|||+|..|+-+|..|++.|.+|+++|+.+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 469999999999999999999999999999988754
No 262
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.64 E-value=0.054 Score=51.14 Aligned_cols=37 Identities=19% Similarity=0.420 Sum_probs=32.6
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
|.....|.|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 6555689999999999999999999998 999999874
No 263
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.64 E-value=0.03 Score=55.77 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4699999999999999999999999999999987643
No 264
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.53 E-value=0.049 Score=55.46 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 4699999999999999999999999999999875
No 265
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.53 E-value=0.048 Score=54.34 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=32.3
Q ss_pred cccEEEECCCchHHHHHhhhhcC-CC-eEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD-GL-KVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~-G~-~VlvlE~~~~ 38 (444)
...|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34799999999999999999999 99 9999999875
No 266
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.53 E-value=0.05 Score=52.17 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=31.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|++..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4455689999999999999999999999999999874
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.52 E-value=0.043 Score=54.18 Aligned_cols=37 Identities=24% Similarity=0.262 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++.|.+|+++|+.++...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 4799999999999999999999999999999887643
No 268
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.52 E-value=0.055 Score=50.90 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 46999999999999999999999999999998765
No 269
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.48 E-value=0.052 Score=50.05 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=30.6
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 489999999999999999999999999998764
No 270
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.44 E-value=0.059 Score=47.39 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=31.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|+++|++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998765
No 271
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.44 E-value=0.059 Score=50.56 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=32.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 469999999999999999999999999999987653
No 272
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.35 E-value=0.06 Score=50.26 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 46999999999999999999999999999997653
No 273
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.35 E-value=0.06 Score=50.81 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 57999999999999999999999999999998766
No 274
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.34 E-value=0.056 Score=53.80 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4699999999999999999999999999999887654
No 275
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.34 E-value=0.057 Score=53.76 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=33.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4699999999999999999999999999999876543
No 276
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.33 E-value=0.056 Score=54.03 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 569999999999999999999999999999864
No 277
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.27 E-value=0.056 Score=53.81 Aligned_cols=35 Identities=14% Similarity=0.011 Sum_probs=32.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
.+|+|||+|.+|+=+|..|++.|.+|+++++++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 46999999999999999999999999999998764
No 278
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.26 E-value=0.063 Score=50.52 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=32.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 46999999999999999999999999999998754
No 279
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.25 E-value=0.062 Score=49.93 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.4
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
+..|.|||+|+.|...|..|+ +|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 999999999875
No 280
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.24 E-value=0.067 Score=43.79 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 281
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.18 E-value=0.068 Score=52.07 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=34.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh
Confidence 46999999999999999999999999999998876543
No 282
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.17 E-value=0.065 Score=52.39 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=34.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
...|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~ 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh
Confidence 357999999999999999999999999999999876543
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.14 E-value=0.049 Score=55.52 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4699999999999999999999999999999875
No 284
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.14 E-value=0.064 Score=50.92 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.7
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
...|.|||+|..|...|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 357999999999999999999999999999985
No 285
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.13 E-value=0.044 Score=50.98 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|--|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999974
No 286
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.09 E-value=0.067 Score=52.85 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=32.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
...+.|||+|..|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36789999999999999999999999999999864
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.09 E-value=0.066 Score=52.94 Aligned_cols=35 Identities=14% Similarity=-0.017 Sum_probs=32.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCe-EEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~~~ 39 (444)
.+|+|||+|.+|+=+|..|++.|.+ |+++++++..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 288
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.04 E-value=0.15 Score=50.37 Aligned_cols=37 Identities=22% Similarity=0.139 Sum_probs=34.2
Q ss_pred ccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG 41 (444)
+||||||||.+|++||..|++. |.+|+++|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999987654
No 289
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.03 E-value=0.071 Score=49.56 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|+....|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6666789999999999999999999999999999864
No 290
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.01 E-value=0.068 Score=53.42 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999875
No 291
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.98 E-value=0.067 Score=53.01 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999874
No 292
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.86 E-value=0.073 Score=54.30 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=33.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 4799999999999999999999999999999886543
No 293
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.86 E-value=0.065 Score=52.95 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=32.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|.|||.|.+|+++|..|+++|++|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46999999999999999999999999999997764
No 294
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.84 E-value=0.075 Score=49.67 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=32.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 46999999999999999999999999999998765
No 295
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.81 E-value=0.073 Score=49.69 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=30.2
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|+++|++|+++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999864
No 296
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.76 E-value=0.061 Score=53.46 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=30.6
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|||+|+|-.|..+|..|+..|++|+++|+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999999999999974
No 297
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.75 E-value=0.085 Score=49.44 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=31.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|+++|++|+++|++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999999764
No 298
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.72 E-value=0.072 Score=52.68 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3599999999999999999999999999999865
No 299
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.69 E-value=0.088 Score=49.45 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=31.3
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
+...|.|||+|..|..+|..|+..|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34579999999999999999999999 99999997
No 300
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.69 E-value=0.087 Score=50.47 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|.-|.+.|..|+++|++|+++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999863
No 301
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.68 E-value=0.06 Score=51.71 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=30.1
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|+++|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999863
No 302
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.66 E-value=0.073 Score=53.05 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=32.5
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcC--CCeEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 37 (444)
|.+...|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 55445799999999999999999999 89999999864
No 303
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.66 E-value=0.067 Score=53.62 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 4699999999999999999999999999999887644
No 304
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.63 E-value=0.083 Score=52.58 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 209 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI 209 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC
Confidence 4699999999999999999999999999999887644
No 305
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.60 E-value=0.087 Score=52.17 Aligned_cols=37 Identities=16% Similarity=0.023 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..++|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 4699999999999999999999999999999887644
No 306
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.59 E-value=0.084 Score=52.69 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=33.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..++|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 469999999999999999999999999999987754
No 307
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.55 E-value=0.096 Score=52.10 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999999999999875
No 308
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=92.54 E-value=0.31 Score=49.99 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=36.8
Q ss_pred cccEEEECCCchHHHHHhhhhcC------CCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD------GLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~------G~~VlvlE~~~~~GG~ 42 (444)
++||||||||++||++|..|+++ |.+|+|+||++.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 58999999999999999999999 9999999999988875
No 309
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.51 E-value=0.099 Score=49.82 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 199 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ 199 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC
Confidence 469999999999999999999999999999987653
No 310
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.46 E-value=0.095 Score=49.16 Aligned_cols=36 Identities=28% Similarity=0.375 Sum_probs=32.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+...
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~ 209 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR 209 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC
Confidence 469999999999999999999999999999987653
No 311
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.45 E-value=0.095 Score=49.06 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=29.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|-.|.+.|..|+ +|.+|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 999999999875
No 312
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.41 E-value=0.09 Score=50.95 Aligned_cols=34 Identities=18% Similarity=0.121 Sum_probs=31.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999999863
No 313
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.39 E-value=0.085 Score=52.07 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999864
No 314
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.38 E-value=0.11 Score=45.97 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=30.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 457999999999999999999999999999875
No 315
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=92.35 E-value=0.29 Score=49.11 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=30.9
Q ss_pred cccEEEECCCchHHHHHhhhhc---CCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~ 38 (444)
.+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3799999999999999999999 9999999999764
No 316
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.25 E-value=0.11 Score=48.74 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=31.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
...|.|||+|..|...|..|++.|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 317
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.20 E-value=0.1 Score=49.49 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..|+|||||-.|..+|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999975
No 318
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.18 E-value=0.1 Score=49.48 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
+..|.|||+|--|...|..|+++|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 357999999999999999999999999999986
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.16 E-value=0.07 Score=48.94 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=31.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...|+|||+|-.|+..|..|.+.|.+|+|++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3569999999999999999999999999999864
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=92.14 E-value=0.093 Score=54.03 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
-+|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 321
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.10 E-value=0.11 Score=51.82 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=33.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4699999999999999999999999999999887643
No 322
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.09 E-value=0.1 Score=49.07 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
..|+|||+|-.|...|..|+++|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 369999999999999999999999 999999974
No 323
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.06 E-value=0.094 Score=51.54 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..+.|||.|..||.+|..|+++|++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 469999999999999999999999999999874
No 324
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.03 E-value=0.076 Score=52.64 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=31.9
Q ss_pred cccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~ 38 (444)
..+|+|||+|.+|+-+|..|++. |.+|+++++++.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 45799999999999999999998 999999999764
No 325
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=92.03 E-value=0.32 Score=49.38 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=33.4
Q ss_pred CcccEEEECCCchHHHHHhhhhc---CCCeEEEEecCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDY 38 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~ 38 (444)
..+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 9999999999753
No 326
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.94 E-value=0.055 Score=47.97 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEE-EecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLH-MDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~Vlv-lE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 88864
No 327
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.93 E-value=0.12 Score=46.52 Aligned_cols=33 Identities=30% Similarity=0.356 Sum_probs=30.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 569999999999999999999999999999864
No 328
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.89 E-value=0.14 Score=47.92 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.5
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...|.|||.|..|...|..|+++|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 329
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.88 E-value=0.1 Score=48.16 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=30.8
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999754
No 330
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.87 E-value=0.13 Score=48.52 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHH-HHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~-aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||.|-+|++ +|..|.++|++|++.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46999999999996 78889999999999999764
No 331
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.86 E-value=0.12 Score=48.27 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 332
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.65 E-value=0.13 Score=52.77 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=34.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
.+++|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 46999999999999999999999999999998876543
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.61 E-value=0.13 Score=48.69 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..|.|||||..|..+|..|+..|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999975
No 334
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.61 E-value=0.38 Score=42.71 Aligned_cols=55 Identities=22% Similarity=0.186 Sum_probs=42.1
Q ss_pred chHHHHHHHHHHHc-CcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 013352 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (444)
Q Consensus 232 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~ 288 (444)
..+.+.+.+.++.. |.+++ +++|++|.. +++++++|.+ +|+++.||.||.+....
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 35666777777776 88888 679999987 5677777877 67789999998765543
No 335
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.59 E-value=0.094 Score=50.39 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 336
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.54 E-value=0.12 Score=48.50 Aligned_cols=32 Identities=25% Similarity=0.563 Sum_probs=29.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|.-|...|..|+++|++|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 45999999999999999999999999999 653
No 337
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.54 E-value=0.13 Score=50.38 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.|||||.|-.|..+|..|.+.|++|+++|+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999975
No 338
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.51 E-value=0.1 Score=48.17 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=30.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 599999999999999999999999999999864
No 339
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.50 E-value=0.1 Score=52.82 Aligned_cols=36 Identities=17% Similarity=-0.057 Sum_probs=33.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+...
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999987764
No 340
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.48 E-value=0.083 Score=47.16 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=29.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...++|+|+|-.|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 3469999999999999999999999 99999874
No 341
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.48 E-value=0.12 Score=48.67 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=31.2
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC----CeEEEEecCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG----LKVLHMDRND 37 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~~~ 37 (444)
+...|.|||+|..|...|..|+++| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3457999999999999999999999 8999999875
No 342
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.47 E-value=0.09 Score=49.19 Aligned_cols=31 Identities=26% Similarity=0.436 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHhhhhcC-----C-CeEEEEecC
Q 013352 6 DVIVLGTGLKECILSGLLSVD-----G-LKVLHMDRN 36 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~-----G-~~VlvlE~~ 36 (444)
.|.|||+|..|...|..|+++ | ++|+++++.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 799999999999999999999 9 999999873
No 343
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.44 E-value=0.13 Score=48.02 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
.|+|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999974
No 344
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.44 E-value=0.37 Score=48.63 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcE--EEEEe-CCe-EEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKV--VGVTS-EGE-TAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v--~gV~~-~g~-~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..++++++ +.|++ +|+ ++.||.||.+....|
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 46778888888999999999999999987335554 34556 666 899999998766554
No 345
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.40 E-value=0.15 Score=44.84 Aligned_cols=33 Identities=33% Similarity=0.290 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 346
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.34 E-value=0.13 Score=50.48 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 369999999999999999998 99999999874
No 347
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.30 E-value=0.16 Score=44.47 Aligned_cols=32 Identities=28% Similarity=0.249 Sum_probs=29.6
Q ss_pred cEEEEC-CCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999863
No 348
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=91.23 E-value=0.42 Score=47.18 Aligned_cols=54 Identities=24% Similarity=0.116 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~----~g~--~i~ad~VI~~~~ 286 (444)
..+.+.|.+.+...|++++++++|+++.. +++++++|++ +|+ +++||.||.+..
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG 159 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATG 159 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCG
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcC
Confidence 35778888888889999999999999987 5677766654 565 799999996543
No 349
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.19 E-value=0.16 Score=47.33 Aligned_cols=33 Identities=21% Similarity=0.525 Sum_probs=30.7
Q ss_pred cEEEEC-CCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|.||| +|..|.+.|..|++.|++|++++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 699999 999999999999999999999998753
No 350
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.19 E-value=0.14 Score=49.99 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 48999999999999999999 99999999864
No 351
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.18 E-value=0.15 Score=48.04 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999874
No 352
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.10 E-value=0.15 Score=51.84 Aligned_cols=35 Identities=23% Similarity=0.189 Sum_probs=31.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..++|||+|..|+=.|..+++.|.+|++++++...
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 46999999999999999999999999999986554
No 353
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=91.07 E-value=0.18 Score=50.47 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 469999999999999999999999999999864
No 354
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.06 E-value=0.15 Score=50.06 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
....|||.|..|+..|..|+++|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999999999999999999999999975
No 355
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.05 E-value=0.12 Score=48.88 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=28.8
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEec
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 35 (444)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 356
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.01 E-value=0.16 Score=50.69 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.7
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.+.+|.|||+|.-|...|..|+++|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999863
No 357
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.00 E-value=0.15 Score=47.39 Aligned_cols=37 Identities=27% Similarity=0.256 Sum_probs=33.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
.+|+|||+|..|+-+|..|++.|.+|+++++++.+..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4699999999999999999999999999999887654
No 358
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=90.90 E-value=0.19 Score=50.78 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
..++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999985
No 359
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.88 E-value=0.16 Score=47.13 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=30.7
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999874
No 360
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.81 E-value=0.17 Score=46.78 Aligned_cols=35 Identities=26% Similarity=0.220 Sum_probs=32.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999998776
No 361
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.70 E-value=0.17 Score=46.66 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=30.1
Q ss_pred cEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+ |..|...|..|+++|++|++++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999 9999999999999999999999864
No 362
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.67 E-value=0.2 Score=46.79 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=33.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~G 40 (444)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~ 190 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR 190 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC
Confidence 469999999999999999999999999999988764
No 363
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.64 E-value=0.15 Score=50.68 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=33.5
Q ss_pred ccEEEECCCchHHHHHhhhhcC-CCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~-G~~VlvlE~~~~~GG 41 (444)
.+++|||+|..|+-+|..|++. |.+|+++++.+.+..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 5799999999999999999999 999999999876543
No 364
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.62 E-value=0.21 Score=45.77 Aligned_cols=33 Identities=9% Similarity=-0.063 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 46999999999999999999999 9999998765
No 365
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.61 E-value=0.2 Score=45.90 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|.|||..|..++..|.++|++|+.+.|+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 359999999999999999999999999999864
No 366
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.55 E-value=0.17 Score=50.13 Aligned_cols=35 Identities=26% Similarity=0.174 Sum_probs=31.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYY 39 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~~ 39 (444)
.+|+|||+|.+|+=+|..|.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 469999999999999999999997 69999998754
No 367
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.51 E-value=0.46 Score=47.58 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=40.6
Q ss_pred CCCcccEEEECCCchHHHHHhhhhc-CCCeEEEEe--------cCCCCCcccee
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESSS 45 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 45 (444)
|..++||+|||||.+|++||..|++ .|++|+|+| +++.+||.|..
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 6667999999999999999999999 999999999 46789998754
No 368
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.49 E-value=0.19 Score=47.10 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHhhhhcC--CCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 79999999975
No 369
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=90.48 E-value=0.44 Score=45.98 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=34.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
++||+|||||++||++|..|+++|.+|+|+|+++.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 589999999999999999999999999999998765
No 370
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=90.46 E-value=0.44 Score=47.60 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=38.9
Q ss_pred CcccEEEECCCchHHHHHhhhhc-CCCeEEEEe--------cCCCCCcccee
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESSS 45 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~-~G~~VlvlE--------~~~~~GG~~~s 45 (444)
.+|||+|||||.+|++||..|++ .|++|+++| +.+.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 46788998754
No 371
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.44 E-value=0.16 Score=44.64 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=31.4
Q ss_pred CCCcccEEEEC-CCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|.....|+|.| +|..|..++..|.++|++|.++.|+.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 55556799999 59999999999999999999999974
No 372
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.37 E-value=0.17 Score=47.56 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCC-CeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 36999999999999999999999 9999999985
No 373
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=90.35 E-value=0.52 Score=47.16 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=38.1
Q ss_pred cccEEEECCCchHHHHHhhhhcC---CCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD---GLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~---G~~VlvlE~~~~~GG~~~s 45 (444)
++||||||||++|++||..|++. |++|+++|+++ +||.|..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~ 45 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVL 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccC
Confidence 48999999999999999999999 99999999998 9997654
No 374
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.34 E-value=0.19 Score=46.78 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=27.3
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|-+||-|..|...|..|.++|++|+++|++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998753
No 375
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.33 E-value=0.23 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|.|||..|..++..|.++|++|+++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998743
No 376
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.28 E-value=0.21 Score=45.77 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=30.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|+|+|-.|..+|..|++.|.+|++++|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998863
No 377
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.25 E-value=0.22 Score=46.76 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=30.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
...|+|||+|-.|.++|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999997 999999874
No 378
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.23 E-value=0.098 Score=46.69 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
..|.|||+|..|.+.|..|.++|++|+.+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 46999999999999999999999999999885
No 379
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.23 E-value=0.49 Score=46.84 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEE-e-CCeEEEcCEEEeCCCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EGETAKCKKVVCDPSYLP 289 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~-~-~g~~i~ad~VI~~~~~~~ 289 (444)
.++.+.+.+.++..|++++++++|++|..++++. +.|. + +|+ +.||.||.+....|
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 4678888888899999999999999998733443 4677 6 676 99999998765543
No 380
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.22 E-value=0.17 Score=45.79 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..|+|||+|-.|+.+|..|++.|. +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 469999999999999999999996 899999863
No 381
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.19 E-value=0.56 Score=47.40 Aligned_cols=39 Identities=8% Similarity=0.162 Sum_probs=34.7
Q ss_pred CCCcccEEEECCCchHHHHHhhhhc---CCCeEEEEecCCCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYY 39 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~---~G~~VlvlE~~~~~ 39 (444)
|+..+||||||||++|+++|+.|++ +|.+|+|+|+.+..
T Consensus 2 ~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 2 NKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 1457999999999999999999999 99999999997643
No 382
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=90.15 E-value=0.56 Score=47.10 Aligned_cols=36 Identities=28% Similarity=0.600 Sum_probs=33.9
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 589999999999999999999999999999998744
No 383
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.11 E-value=0.53 Score=46.89 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=38.4
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCcccee
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~~~s 45 (444)
+|||+|||||++|++||..|+++|++|+|+|+ +.+||.|..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 69999999999999999999999999999999 789998754
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.10 E-value=0.19 Score=52.84 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999975
No 385
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.07 E-value=0.2 Score=48.17 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
+..|||+|||-+|..+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4679999999999999999999998 999999984
No 386
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.03 E-value=0.18 Score=47.31 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
..|.|||+|..|...|..|+++|+ +|++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 469999999999999999999999 99999996
No 387
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.00 E-value=0.24 Score=46.59 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=31.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
...|.|||+|-.|.++|..|+..|. +|.++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4579999999999999999999998 999999975
No 388
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=89.98 E-value=0.48 Score=47.45 Aligned_cols=39 Identities=28% Similarity=0.421 Sum_probs=35.4
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
+++||+|||||++|+++|+.|+++|++|+|+||++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 579999999999999999999999999999999876554
No 389
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.97 E-value=0.13 Score=49.07 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=31.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCC-------CeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 46999999999999999999999 99999999765
No 390
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.95 E-value=0.22 Score=47.32 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.|.|||.|..|.+.|..|.++|++|+++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 391
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.94 E-value=0.24 Score=46.37 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=28.7
Q ss_pred ccEEEECCC-chHHHHHhhhhcCCCeEEEEecC
Q 013352 5 YDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
..|+|||+| +.|..+|..|...|.+|++++++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 469999999 67999999999999999998765
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.91 E-value=0.2 Score=48.68 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999875
No 393
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.89 E-value=0.24 Score=45.78 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999999875
No 394
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=89.76 E-value=0.26 Score=49.08 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 469999999999999999999999999999853
No 395
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.75 E-value=0.22 Score=46.68 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
..|.|||+|..|.+.|..|.++|+ +|+++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 469999999999999999999999 999999975
No 396
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.69 E-value=0.25 Score=49.17 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=31.4
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..+|.|||+|..|...|..|+++|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 397
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.64 E-value=0.26 Score=46.04 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=30.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..|.|||||-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999997 999999874
No 398
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.60 E-value=0.26 Score=49.41 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 399
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.58 E-value=0.25 Score=47.34 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|-.|+.++..|...|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 400
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.58 E-value=0.24 Score=47.93 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|..|+.+|..|...|.+|+++|+++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 401
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.58 E-value=0.22 Score=49.81 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHhhhhcC--CCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 37 (444)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3699999999999999999998 79999999863
No 402
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.55 E-value=0.24 Score=45.32 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999864
No 403
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.49 E-value=0.27 Score=48.94 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=31.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999975
No 404
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.48 E-value=0.28 Score=44.76 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|||+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998874
No 405
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=89.46 E-value=0.85 Score=45.93 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=33.5
Q ss_pred CcccEEEECCCchHHHHHhhhhc------------CCCeEEEEecCCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSV------------DGLKVLHMDRNDY 38 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~------------~G~~VlvlE~~~~ 38 (444)
..+||||||||++|+++|..|++ +|.+|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999999 9999999999764
No 406
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=89.46 E-value=0.98 Score=37.94 Aligned_cols=55 Identities=20% Similarity=0.184 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~-~g~~i~ad~VI~~~~~~~~ 290 (444)
.++.+.+.+.++..|++++++ +|++|.. +++. +.|.+ +| ++.||.||.+....|.
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~-~~~~-~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRD-MGGV-FEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEE-CSSS-EEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEE-cCCE-EEEEECCC-EEEECEEEECCCCCCC
Confidence 467777888888899999999 9999987 3444 45666 55 8999999987666554
No 407
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.44 E-value=0.21 Score=45.26 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHhhhhcCC-CeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G-~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|+++| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999874
No 408
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.39 E-value=0.26 Score=46.50 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=30.9
Q ss_pred CCC-cccEEEECCCchHHHHHhhhhcCCC--eEEEEecC
Q 013352 1 MDE-EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (444)
Q Consensus 1 M~~-~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~ 36 (444)
|++ ...|.|||+|..|.++|..|+..|. +|.++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 533 4579999999999999999999997 89999985
No 409
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.37 E-value=0.24 Score=47.50 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.7
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
+..|+|+|||-+|..+|..|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4679999999999999999999997 89999997
No 410
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.36 E-value=0.31 Score=45.85 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=31.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
...|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999988 999999975
No 411
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.31 E-value=0.23 Score=44.95 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCC----CeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDG----LKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G----~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|+++| ++|.+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998764
No 412
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.28 E-value=0.21 Score=46.91 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|+++|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 48999999999999999999999 999999873
No 413
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=89.25 E-value=0.24 Score=48.10 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=35.4
Q ss_pred cccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCCcc
Q 013352 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGE 42 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~GG~ 42 (444)
++||||||||++|+++|+.|+++ |++|+|+|+++..+|.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 48999999999999999999999 9999999998765553
No 414
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.11 E-value=0.23 Score=45.56 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|+|+|-.|..+|..|++.|.+|+++.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 415
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.05 E-value=0.19 Score=48.87 Aligned_cols=29 Identities=38% Similarity=0.493 Sum_probs=27.5
Q ss_pred cEEEECCCchHHHHHhhhhc-CCCeEEEEe
Q 013352 6 DVIVLGTGLKECILSGLLSV-DGLKVLHMD 34 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~-~G~~VlvlE 34 (444)
.|.|||+|..|...|..|++ +|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 69999999999999999998 599999999
No 416
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.05 E-value=0.28 Score=45.36 Aligned_cols=32 Identities=28% Similarity=0.310 Sum_probs=30.0
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++.|++|.+++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 417
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.03 E-value=0.29 Score=47.05 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|-.|+.+|..|...|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 418
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.96 E-value=0.3 Score=44.83 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999875
No 419
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.95 E-value=0.27 Score=48.74 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHhhhh--------------------cCCC-eEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLS--------------------VDGL-KVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La--------------------~~G~-~VlvlE~~~~ 38 (444)
..|+|||+|..|+=+|..|+ +.|. +|+++++++.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 46999999999999999998 6786 7999999754
No 420
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.94 E-value=0.34 Score=41.59 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCCcccEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|.. ..|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 543 46999998 9999999999999999999999864
No 421
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.90 E-value=0.19 Score=48.37 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=30.8
Q ss_pred cEEEECCCchHHHHHhhhhcCC-------CeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G-------~~VlvlE~~~~ 38 (444)
.|.|||+|.-|...|..|+++| ++|++++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 5999999999999999999999 99999998764
No 422
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.84 E-value=0.33 Score=43.60 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC----eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL----KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~----~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|.++|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999974
No 423
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.78 E-value=0.24 Score=46.31 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHhhhhcCC--CeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDG--LKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~ 37 (444)
.|.|||+|-.|...|..|+++| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 5999999999999999999999 7999999964
No 424
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.71 E-value=0.3 Score=48.79 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999864
No 425
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=88.59 E-value=0.23 Score=52.19 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999875
No 426
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=88.56 E-value=0.68 Score=46.28 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=35.9
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcC--CCeEEEEecCCCCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYG 40 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~~~G 40 (444)
|+.++||||||||.+|++||..|.++ |.+|+++|++++.+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 55679999999999999999998877 89999999998765
No 427
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.54 E-value=0.34 Score=44.98 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..|+|||+|-.|..+|..|++.|. +|+++.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 999998863
No 428
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.44 E-value=0.36 Score=44.37 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=31.3
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC---eEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL---KVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~---~VlvlE~~~ 37 (444)
...|.|||+|.-|...|..|.++|+ +|+++|++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999975
No 429
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.41 E-value=0.3 Score=51.51 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=32.6
Q ss_pred ccEEEEC--CCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799998 99999999999999999999999987 543
No 430
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.39 E-value=0.31 Score=48.59 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=30.0
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
+|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 431
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.28 E-value=0.37 Score=46.03 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.3
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
.|+|||+|..|.-+|..+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 599999999999999999999999999998753
No 432
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.25 E-value=0.3 Score=44.35 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCe-EEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLK-VLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~-VlvlE~~~ 37 (444)
..|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4699999999999999999999998 99999864
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.18 E-value=0.35 Score=44.29 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++.|+ +|+++|++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 48999999999999999999998 999999874
No 434
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.10 E-value=0.33 Score=45.58 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.6
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
....|+|||+|-.|.++|..|+..|. .|.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999998884 899999863
No 435
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.01 E-value=0.25 Score=53.90 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=34.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCCCCc
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~~GG 41 (444)
..|+|||+|..|+-+|..|++.|.+|+++|+++.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4699999999999999999999999999999987754
No 436
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=87.95 E-value=1.1 Score=46.08 Aligned_cols=39 Identities=26% Similarity=0.278 Sum_probs=34.9
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC-CCCc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYGG 41 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~-~~GG 41 (444)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 36999999999999999999999999999999984 4553
No 437
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.86 E-value=0.38 Score=45.57 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=30.1
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|.+.|..|++.|++|++.++++
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 59999999999999999999999999999875
No 438
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.85 E-value=0.36 Score=50.77 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..++.+|++|+++|.++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 469999999999999999999999999999875
No 439
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.85 E-value=0.38 Score=46.33 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|+|+|..|+.+|..|...|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 440
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=87.77 E-value=1 Score=41.28 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHH-cCcEEEcCCcceeEEEcCCCcEEEEEe----------CC-----eEEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS----------EG-----ETAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~g~v~gV~~----------~g-----~~i~ad~VI~~~~~ 287 (444)
.++.+.+.+.+.. .|++++++++|++|.. +++++.+|.+ +| .++.||.||.+...
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 5667777777655 6999999999999987 5677777764 22 67999998866543
No 441
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.66 E-value=0.44 Score=43.01 Aligned_cols=33 Identities=9% Similarity=0.077 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 369999999999999999999999999999874
No 442
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.59 E-value=0.36 Score=45.32 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=32.4
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
|.+...|+|||||-.|.++|..|+..|. .+.++|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 5566789999999999999999998886 899999853
No 443
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.58 E-value=0.41 Score=44.17 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=29.0
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..++|+|+|-.|..+|..|++.| +|++.+|+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998863
No 444
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=87.45 E-value=0.49 Score=43.65 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=31.6
Q ss_pred CCCcccEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|.+...|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 543456999996 9999999999999999999999875
No 445
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.34 E-value=0.48 Score=41.22 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=29.2
Q ss_pred cEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 3899995 9999999999999999999999974
No 446
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.23 E-value=0.37 Score=44.18 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|||+|-.|...|..|.+.|.+|++++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 447
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.94 E-value=0.45 Score=49.82 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=34.1
Q ss_pred ccEEEEC--CCchHHHHHhhhhcCCCeEEEEecCCCCCcc
Q 013352 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (444)
Q Consensus 5 ~DViIIG--aGl~Gl~aA~~La~~G~~VlvlE~~~~~GG~ 42 (444)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~ 563 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW 563 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc
Confidence 3599999 9999999999999999999999998876654
No 448
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.93 E-value=0.45 Score=44.12 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.5
Q ss_pred cccEEEECC-CchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 4 ~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
...|+|.|| |..|..++..|.++|++|+++.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 356999998 99999999999999999999998754
No 449
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.81 E-value=0.38 Score=44.57 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
.|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 48999999999999999999998 999999864
No 450
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=86.78 E-value=1.3 Score=45.60 Aligned_cols=38 Identities=24% Similarity=0.334 Sum_probs=34.5
Q ss_pred CcccEEEECCCchHHHHHhhhhcCCCeEEEEecCC-CCC
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYG 40 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~-~~G 40 (444)
.+|||||||||++|+.||+.|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46999999999999999999999999999999984 344
No 451
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=86.63 E-value=0.57 Score=43.21 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=29.6
Q ss_pred cccEEEECCC-chHHHHHhhhhcCCCeEEEEecC
Q 013352 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
..+|+|||+| +.|..+|..|.+.|..|+++.++
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 3579999999 68999999999999999999754
No 452
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.60 E-value=0.44 Score=43.72 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=30.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..++|||+|-+|..+|..|++.|. +|+++.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 899998874
No 453
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.57 E-value=0.46 Score=47.03 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.7
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
...|+|||+|-.|...|..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 356999999999999999999999999999985
No 454
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.56 E-value=0.52 Score=43.74 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 455
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.56 E-value=0.5 Score=42.87 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.++|||+|-.|...|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 456
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.46 E-value=0.61 Score=40.73 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=28.9
Q ss_pred cEEEEC-CCchHHHHHhhhh-cCCCeEEEEecCC
Q 013352 6 DVIVLG-TGLKECILSGLLS-VDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La-~~G~~VlvlE~~~ 37 (444)
.|+|.| +|-.|..+|..|+ ++|++|+++.|+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 399999 5999999999999 8999999999874
No 457
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=86.44 E-value=0.49 Score=48.21 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=31.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
-+++|||+|-.|..+|..|.+.|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 4699999999999999999999999999999864
No 458
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.44 E-value=0.54 Score=42.50 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
.++|||+|-+|.+++..|.+.|. +|++++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999997 999999863
No 459
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.43 E-value=0.49 Score=47.39 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHH-HHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~-aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999999997 6999999999999999864
No 460
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.42 E-value=0.43 Score=52.36 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.6
Q ss_pred cEEEECCCchHHHHHhhhhcCCC-eEEEEecCCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDY 38 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~~ 38 (444)
+|+|||+|..|+=+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999996 9999999863
No 461
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=86.40 E-value=0.41 Score=45.08 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
..|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 479999999999999999999997 899999854
No 462
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=86.34 E-value=0.38 Score=45.45 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
-.++|+|.|-.|...|..|.+.|+ |+++|+++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 369999999999999999999999 99999975
No 463
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.34 E-value=0.5 Score=44.29 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
..|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999998885 899999873
No 464
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=86.31 E-value=0.62 Score=43.05 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=31.5
Q ss_pred CCCcccEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|.....|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 544457999995 9999999999999999999999975
No 465
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.31 E-value=0.61 Score=43.71 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCCcccEEEEC-CCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 1 MDEEYDVIVLG-TGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 1 M~~~~DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
|++...|+|.| +|..|..+|..|+++|++|.+++++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 55556799998 599999999999999999999998654
No 466
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.21 E-value=0.58 Score=40.87 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=29.0
Q ss_pred EEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 7 VIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 7 ViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
|+|.|| |..|..++..|.++|++|.++.|+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899998 9999999999999999999999863
No 467
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.20 E-value=0.54 Score=41.60 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=30.2
Q ss_pred ccEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|+|.|| |..|..+|..|.++|++|.++.|+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 46999998 9999999999999999999999874
No 468
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.19 E-value=0.42 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.2
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 4699999999999999999999999999998754
No 469
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.17 E-value=0.36 Score=46.47 Aligned_cols=39 Identities=26% Similarity=0.393 Sum_probs=34.4
Q ss_pred cccEEEECC-CchHHHHHhhhhcCCC---eEEEEecCC-CCCcc
Q 013352 4 EYDVIVLGT-GLKECILSGLLSVDGL---KVLHMDRND-YYGGE 42 (444)
Q Consensus 4 ~~DViIIGa-Gl~Gl~aA~~La~~G~---~VlvlE~~~-~~GG~ 42 (444)
...|+|||+ |.+|+.|+..+..-|. +|+++|.+. .-||.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 357999999 9999999999999997 999999976 55775
No 470
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.16 E-value=0.61 Score=46.22 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=31.0
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3569999999999999999999999999999864
No 471
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=86.16 E-value=1.2 Score=41.54 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~~~g~~i~ad~VI~~~~ 286 (444)
.++.+.+.+.++..|.+++++++|++|.. +++.+.+|.++++++.+|+||.+..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~~~~d~vV~AtG 129 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSH-FGERLRVVARDGRQWLARAVISATG 129 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEE-CCCcEEEEEeCCCEEEeCEEEECCC
Confidence 45666677777888999999999999987 4555443777545899999886543
No 472
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=86.15 E-value=0.44 Score=43.12 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=28.1
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEec
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~ 35 (444)
.|.|||+|..|...|..|+++|++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999999876
No 473
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.12 E-value=0.43 Score=44.42 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
..|.|||||..|...|..|+.+|. +|.++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 469999999999999999999998 999999976
No 474
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=86.08 E-value=1.7 Score=41.62 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=40.8
Q ss_pred chHHHHHHHHHHHcCcEEEcCCcceeEEEcCCCcEEEEE--eCCe--EEEcCEEEeCCCC
Q 013352 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT--SEGE--TAKCKKVVCDPSY 287 (444)
Q Consensus 232 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~g~v~gV~--~~g~--~i~ad~VI~~~~~ 287 (444)
..+.+.|.+.+...|++++++++|++|..++++.+ .|+ .+|+ +++||.||.+...
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 46777888888788999999999999986323333 344 3776 7999999976443
No 475
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.03 E-value=0.65 Score=42.56 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=29.9
Q ss_pred cccEEEECCC-chHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..+|+|||+| +.|..+|..|.+.|..|+++.++.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 3579999999 679999999999999999997543
No 476
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=86.03 E-value=0.41 Score=44.14 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|.|||+|..|...|..|++.|++|++++ +.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 59999999999999999999999999998 54
No 477
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.95 E-value=0.59 Score=43.22 Aligned_cols=33 Identities=27% Similarity=0.241 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
..|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 478
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.92 E-value=0.47 Score=44.38 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHhhhhcCCC--eEEEEecCC
Q 013352 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (444)
Q Consensus 6 DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~~ 37 (444)
.|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 48999999999999999999887 999999976
No 479
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=85.87 E-value=0.63 Score=45.96 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=30.6
Q ss_pred cccEEEECCCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
...|+|+|+|-.|..+|..|++.|.+|++++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 3569999999999999999999999999999863
No 480
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=85.84 E-value=0.64 Score=43.48 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
..++|+|+|-+|.++|..|++.|. +|+++.|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999997 89999887
No 481
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=85.68 E-value=0.68 Score=42.57 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..++|+|+|-+|.++|..|.+.|. +|+++.|+.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999997 999998863
No 482
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.53 E-value=0.7 Score=42.48 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.6
Q ss_pred cEEEECC-CchHHHHHhhhhcCCCeEEEEecCCCC
Q 013352 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDYY 39 (444)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~~~ 39 (444)
.|+|.|| |..|..++.+|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 3899998 999999999999999999999887644
No 483
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.45 E-value=0.65 Score=40.50 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=29.5
Q ss_pred cEEEEC-CCchHHHHHhhhhcCCCeEEEEecCC
Q 013352 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 6 DViIIG-aGl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.|+|.| +|..|..++..|.++|++|.++.|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 79999999999999999999999974
No 484
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=85.33 E-value=0.49 Score=44.51 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=32.2
Q ss_pred CCCcccEEEECC-CchHHHHHhhhhcCCC-------eEEEEecCC
Q 013352 1 MDEEYDVIVLGT-GLKECILSGLLSVDGL-------KVLHMDRND 37 (444)
Q Consensus 1 M~~~~DViIIGa-Gl~Gl~aA~~La~~G~-------~VlvlE~~~ 37 (444)
|.....|+|+|| |..|..++..|.++|+ +|.++|.++
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 665568999997 9999999999999996 899999853
No 485
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=85.25 E-value=0.78 Score=44.55 Aligned_cols=34 Identities=26% Similarity=0.174 Sum_probs=31.4
Q ss_pred CCCcccEEEECCCchHHHHHhhhhcCCCeEEEEe
Q 013352 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMD 34 (444)
Q Consensus 1 M~~~~DViIIGaGl~Gl~aA~~La~~G~~VlvlE 34 (444)
|+....|.|+|+|-.|...+..+.+.|++|.++|
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 5556789999999999999999999999999999
No 486
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=85.21 E-value=0.7 Score=42.51 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..++|+|+|-+|.++|..|++.|. +|+++.|+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 469999999999999999999998 799998863
No 487
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.19 E-value=0.76 Score=42.22 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..++|+|+|-+|..+|..|++.|. +|+++.|+.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 469999999999999999999995 999998863
No 488
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=85.09 E-value=0.72 Score=41.98 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=28.9
Q ss_pred ccEEEECCC-chHHHHHhhhhcCCCeEEEEecC
Q 013352 5 YDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaG-l~Gl~aA~~La~~G~~VlvlE~~ 36 (444)
.+|+|||.| +.|..+|..|.+.|..|+++.++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 579999976 79999999999999999999864
No 489
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.03 E-value=0.72 Score=41.60 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=29.3
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
..|+|||+|-.|..+|..|++.|. +++++|..
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 579999999999999999999996 88999885
No 490
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=84.94 E-value=0.74 Score=42.08 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC-eEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~~ 37 (444)
..++|+|+|-+|..+|..|++.|. +|+++.|+.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999995 999998863
No 491
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.67 E-value=0.79 Score=43.19 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~ 36 (444)
..|.|||+|..|.++|+.|+..|. ++.++|.+
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 579999999999999999999997 89999986
No 492
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.66 E-value=0.57 Score=43.06 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHhhhhcC--CCeEEEEecCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--G~~VlvlE~~~ 37 (444)
..|.|||+|..|...|..|++. |++|+++|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4699999999999999999988 68999999864
No 493
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=84.65 E-value=0.81 Score=42.20 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=29.1
Q ss_pred ccEEEECC-CchHHHHHhhhhcCCCeEEEEecCC
Q 013352 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (444)
Q Consensus 5 ~DViIIGa-Gl~Gl~aA~~La~~G~~VlvlE~~~ 37 (444)
.+|+|||. |+.|..+|..|.+.|..|+++.++.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57999996 5689999999999999999998743
No 494
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=84.61 E-value=0.95 Score=45.35 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHcC-cEEEcCCcceeEEEcCCC-cEEEEEe---CC-----eEEEcCEEEeCCCCC
Q 013352 233 ELPQAFARLSAVYG-GTYMLNKPECKVEFDEEG-KVVGVTS---EG-----ETAKCKKVVCDPSYL 288 (444)
Q Consensus 233 ~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~g-~v~gV~~---~g-----~~i~ad~VI~~~~~~ 288 (444)
....++.+.+...| .+|++++.|++|..++++ ++++|.. +| .+++|+.||.+...+
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 44455556566665 899999999999985434 7999976 45 368899988776543
No 495
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=84.85 E-value=0.19 Score=43.80 Aligned_cols=34 Identities=26% Similarity=0.123 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCCeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~~VlvlE~~~~ 38 (444)
..|.|||+|..|...|..|.+.|++|++++++..
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 3589999999999999999999999999988653
No 496
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.45 E-value=0.58 Score=44.02 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHhhhhcCCC--eEEEEecC
Q 013352 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~G~--~VlvlE~~ 36 (444)
..|.|||+|..|.++|..|+..|. ++.++|.+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 469999999999999999999987 89999985
No 497
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=84.33 E-value=1.4 Score=45.11 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=36.4
Q ss_pred CcccEEEECCCchHHHHHhhhhcCC--CeEEEEecCCCCCcc
Q 013352 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGE 42 (444)
Q Consensus 3 ~~~DViIIGaGl~Gl~aA~~La~~G--~~VlvlE~~~~~GG~ 42 (444)
.++||||||+|++||+||+.|+++| .+|+||||....+|.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 3589999999999999999999999 999999998876654
No 498
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=84.26 E-value=0.71 Score=45.67 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=29.4
Q ss_pred ccEEEECCCchHHHHHhhhhcC--------------------C-CeEEEEecCCC
Q 013352 5 YDVIVLGTGLKECILSGLLSVD--------------------G-LKVLHMDRNDY 38 (444)
Q Consensus 5 ~DViIIGaGl~Gl~aA~~La~~--------------------G-~~VlvlE~~~~ 38 (444)
..|+|||+|..|+=+|..|++. | .+|+++++++.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 4699999999999999999874 6 59999999754
No 499
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.10 E-value=0.64 Score=42.93 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=29.8
Q ss_pred cccEEEECCCchHHHHHhhhhcCCC-eEEEEecC
Q 013352 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (444)
Q Consensus 4 ~~DViIIGaGl~Gl~aA~~La~~G~-~VlvlE~~ 36 (444)
...|+|||+|-.|+.+|.+|+++|. +++++|..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3579999999999999999999995 89999974
No 500
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.06 E-value=0.82 Score=42.75 Aligned_cols=32 Identities=31% Similarity=0.210 Sum_probs=29.5
Q ss_pred cEEEECC-CchHHHHHhhhhcCC--CeEEEEecCC
Q 013352 6 DVIVLGT-GLKECILSGLLSVDG--LKVLHMDRND 37 (444)
Q Consensus 6 DViIIGa-Gl~Gl~aA~~La~~G--~~VlvlE~~~ 37 (444)
.|+|||| |-.|..+|..|+..| .+|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 5899998 999999999999988 6899999976
Done!