Query         013354
Match_columns 444
No_of_seqs    382 out of 2596
Neff          8.4 
Searched_HMMs 29240
Date          Mon Mar 25 09:00:45 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013354.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013354hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-63 6.5E-68  484.7  22.0  258  155-417    32-298 (311)
  2 3hyh_A Carbon catabolite-derep 100.0 1.7E-62 5.7E-67  471.3  23.2  257  155-416    13-269 (275)
  3 4fih_A Serine/threonine-protei 100.0 2.3E-62 7.8E-67  483.9  23.8  258  154-418    73-332 (346)
  4 4b9d_A Serine/threonine-protei 100.0 3.5E-62 1.2E-66  483.3  23.0  258  154-416    23-283 (350)
  5 3fpq_A Serine/threonine-protei 100.0 6.3E-61 2.1E-65  464.1  28.2  254  157-416    28-289 (290)
  6 4fie_A Serine/threonine-protei 100.0 1.5E-61 5.2E-66  489.5  23.0  258  154-418   150-409 (423)
  7 3ubd_A Ribosomal protein S6 ki 100.0 3.5E-61 1.2E-65  468.3  20.8  257  154-416    23-288 (304)
  8 4g3f_A NF-kappa-beta-inducing  100.0   5E-60 1.7E-64  465.8  24.0  251  155-416    58-329 (336)
  9 4b99_A Mitogen-activated prote 100.0 2.1E-58 7.3E-63  465.9  25.3  260  153-416    52-351 (398)
 10 4g31_A Eukaryotic translation  100.0 1.7E-58 5.9E-63  449.9  20.8  255  156-419     6-289 (299)
 11 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-57 7.8E-62  441.6  22.6  254  153-415    11-286 (299)
 12 4aoj_A High affinity nerve gro 100.0 1.3E-56 4.4E-61  442.1  26.3  251  153-410    39-313 (329)
 13 4gt4_A Tyrosine-protein kinase 100.0 1.4E-56 4.8E-61  437.8  22.5  252  153-410    24-300 (308)
 14 3omv_A RAF proto-oncogene seri 100.0 4.4E-56 1.5E-60  433.3  25.8  249  153-408    34-292 (307)
 15 3v5w_A G-protein coupled recep 100.0 1.9E-55 6.4E-60  464.6  25.2  261  153-416   187-456 (689)
 16 4f9c_A Cell division cycle 7-r 100.0 2.5E-55 8.7E-60  438.5  24.3  253  154-416    20-359 (361)
 17 3uto_A Twitchin; kinase, muscl 100.0 4.5E-55 1.5E-59  461.7  26.5  257  154-416   156-417 (573)
 18 4ase_A Vascular endothelial gr 100.0 2.3E-55 7.8E-60  436.8  21.0  253  153-410    62-341 (353)
 19 3fe3_A MAP/microtubule affinit 100.0 2.2E-52 7.4E-57  412.6  31.8  259  154-417    14-272 (328)
 20 3zgw_A Maternal embryonic leuc 100.0 1.1E-51 3.7E-56  410.7  25.7  259  152-416     7-267 (347)
 21 1o6l_A RAC-beta serine/threoni 100.0 2.7E-51 9.3E-56  406.3  26.9  258  154-416     4-267 (337)
 22 3hmm_A TGF-beta receptor type- 100.0 4.7E-52 1.6E-56  405.6  20.6  247  155-410     3-291 (303)
 23 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-51 4.1E-56  411.4  23.3  259  153-416    21-287 (353)
 24 2yab_A Death-associated protei 100.0 4.4E-51 1.5E-55  408.5  26.5  263  153-416    10-279 (361)
 25 4dc2_A Protein kinase C IOTA t 100.0 1.2E-50 4.1E-55  409.7  26.7  258  154-416    51-325 (396)
 26 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.5E-51 8.7E-56  406.3  21.2  258  155-417     9-266 (336)
 27 3fxz_A Serine/threonine-protei 100.0 6.7E-51 2.3E-55  396.0  23.7  258  154-418    19-278 (297)
 28 1fot_A TPK1 delta, CAMP-depend 100.0   1E-50 3.5E-55  398.9  24.7  256  154-416     5-265 (318)
 29 3a8x_A Protein kinase C IOTA t 100.0 4.4E-50 1.5E-54  398.9  28.3  258  154-416     8-282 (345)
 30 3o0g_A Cell division protein k 100.0 2.8E-50 9.5E-55  389.8  26.0  259  155-417     2-290 (292)
 31 1xjd_A Protein kinase C, theta 100.0 8.1E-51 2.8E-55  404.1  22.7  259  153-416    15-276 (345)
 32 2r5t_A Serine/threonine-protei 100.0 2.3E-50 7.7E-55  405.0  25.7  260  152-416    35-300 (373)
 33 2bdw_A Hypothetical protein K1 100.0 1.9E-50 6.6E-55  404.0  24.7  257  155-415    29-290 (362)
 34 2i0e_A Protein kinase C-beta I 100.0 2.7E-50 9.3E-55  401.5  24.9  259  153-416    18-283 (353)
 35 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-50 9.3E-55  401.1  24.7  256  154-416    40-300 (350)
 36 1tki_A Titin; serine kinase, m 100.0 1.1E-50 3.8E-55  399.1  21.5  256  154-416     4-264 (321)
 37 2y0a_A Death-associated protei 100.0   4E-50 1.4E-54  395.8  25.4  263  154-417    10-279 (326)
 38 3tki_A Serine/threonine-protei 100.0 2.6E-50 8.8E-55  396.7  23.7  260  154-417     6-269 (323)
 39 3soa_A Calcium/calmodulin-depe 100.0 1.1E-49 3.8E-54  408.7  29.2  257  155-415    11-273 (444)
 40 3kk8_A Calcium/calmodulin depe 100.0   2E-49 6.8E-54  381.5  28.9  264  153-420     4-272 (284)
 41 4fr4_A YANK1, serine/threonine 100.0 3.7E-50 1.3E-54  404.7  24.7  261  152-416    12-278 (384)
 42 3uc3_A Serine/threonine-protei 100.0 4.6E-50 1.6E-54  401.0  25.0  258  153-416    18-281 (361)
 43 3niz_A Rhodanese family protei 100.0 5.1E-50 1.7E-54  392.3  24.3  263  151-418    17-309 (311)
 44 2w4o_A Calcium/calmodulin-depe 100.0   8E-50 2.7E-54  397.4  25.8  258  153-418    51-314 (349)
 45 2eue_A Carbon catabolite derep 100.0   2E-50 6.7E-55  387.3  20.5  258  154-416    12-269 (275)
 46 3g33_A Cell division protein k 100.0 4.4E-50 1.5E-54  391.3  23.0  263  153-417     7-304 (308)
 47 2owb_A Serine/threonine-protei 100.0 1.1E-49 3.6E-54  393.9  25.7  259  153-416    39-298 (335)
 48 3gni_B Strad alpha; kinase fol 100.0 1.8E-49 6.3E-54  400.0  27.5  263  152-417    22-341 (389)
 49 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.4E-50 1.2E-54  396.5  21.6  261  153-417    32-326 (329)
 50 3a62_A Ribosomal protein S6 ki 100.0 1.3E-49 4.3E-54  392.3  25.5  260  153-416    15-283 (327)
 51 4ejn_A RAC-alpha serine/threon 100.0 5.8E-50   2E-54  411.3  23.7  259  153-416   146-411 (446)
 52 2y94_A 5'-AMP-activated protei 100.0 6.4E-50 2.2E-54  413.6  23.6  260  153-416    14-273 (476)
 53 2zv2_A Calcium/calmodulin-depe 100.0 5.4E-50 1.9E-54  388.9  21.5  260  154-414    12-297 (298)
 54 1kob_A Twitchin; kinase, intra 100.0 2.4E-49 8.2E-54  399.4  26.8  258  154-417    50-312 (387)
 55 3c0i_A Peripheral plasma membr 100.0 4.3E-50 1.5E-54  399.6  20.7  261  154-416    23-293 (351)
 56 1ob3_A PFPK5, cell division co 100.0 1.3E-49 4.3E-54  384.6  22.6  257  155-416     2-287 (288)
 57 3v8s_A RHO-associated protein  100.0 3.3E-50 1.1E-54  408.5  19.0  261  153-416    67-336 (410)
 58 2x4f_A Myosin light chain kina 100.0 1.3E-49 4.6E-54  399.4  23.3  254  157-416    91-349 (373)
 59 3is5_A Calcium-dependent prote 100.0 4.2E-49 1.4E-53  380.6  25.4  257  154-416    21-285 (285)
 60 4aw2_A Serine/threonine-protei 100.0 3.9E-50 1.3E-54  411.1  18.9  262  153-416    72-345 (437)
 61 4agu_A Cyclin-dependent kinase 100.0 8.6E-49 2.9E-53  382.3  27.5  262  155-419     3-294 (311)
 62 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-49   4E-54  390.6  20.8  259  154-417     4-301 (317)
 63 1nxk_A MAP kinase-activated pr 100.0 2.7E-49 9.4E-54  400.8  23.5  252  155-417    61-329 (400)
 64 2a2a_A Death-associated protei 100.0 5.9E-49   2E-53  386.0  25.1  263  154-417    11-280 (321)
 65 2vd5_A DMPK protein; serine/th 100.0   1E-49 3.5E-54  405.1  20.2  261  153-416    59-334 (412)
 66 3rp9_A Mitogen-activated prote 100.0 3.1E-49 1.1E-53  407.0  24.0  260  153-416    51-403 (458)
 67 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-49 5.8E-54  380.9  20.5  256  154-416     8-268 (277)
 68 2h6d_A 5'-AMP-activated protei 100.0 3.9E-49 1.3E-53  377.9  23.0  261  153-417     9-269 (276)
 69 3fdn_A Serine/threonine-protei 100.0 2.1E-49 7.3E-54  380.9  21.0  260  153-418     7-266 (279)
 70 1t4h_A Serine/threonine-protei 100.0   2E-48   7E-53  376.1  27.9  259  152-416    23-289 (290)
 71 3p1a_A MYT1 kinase, membrane-a 100.0 8.7E-49   3E-53  383.4  25.5  252  155-415    57-310 (311)
 72 3oz6_A Mitogen-activated prote 100.0 5.5E-49 1.9E-53  396.6  24.7  257  155-416     9-335 (388)
 73 2rku_A Serine/threonine-protei 100.0 1.7E-48 5.9E-53  377.4  27.1  259  153-416    13-272 (294)
 74 3dls_A PAS domain-containing s 100.0 1.9E-49 6.4E-54  392.6  20.5  256  155-418    24-283 (335)
 75 1phk_A Phosphorylase kinase; g 100.0 2.4E-48 8.3E-53  376.6  27.0  265  153-417    15-291 (298)
 76 2y7j_A Phosphorylase B kinase  100.0 1.6E-48 5.6E-53  390.3  26.4  261  155-415    94-365 (365)
 77 3cok_A Serine/threonine-protei 100.0 7.9E-49 2.7E-53  376.5  22.9  258  155-417    11-270 (278)
 78 2c30_A Serine/threonine-protei 100.0 1.3E-48 4.5E-53  384.1  24.9  255  156-417    46-302 (321)
 79 1x8b_A WEE1HU, WEE1-like prote 100.0 2.5E-48 8.7E-53  373.3  26.2  253  155-417    11-287 (289)
 80 3qd2_B Eukaryotic translation  100.0 4.3E-49 1.5E-53  386.9  21.2  254  155-416     6-332 (332)
 81 2yex_A Serine/threonine-protei 100.0 1.9E-48 6.5E-53  372.9  24.3  260  155-418     7-270 (276)
 82 2vgo_A Serine/threonine-protei 100.0 8.2E-49 2.8E-53  377.8  21.9  260  153-418    12-271 (284)
 83 3n9x_A Phosphotransferase; mal 100.0 5.9E-48   2E-52  394.9  29.4  261  152-416    23-368 (432)
 84 1ua2_A CAK, cell division prot 100.0 1.1E-48 3.6E-53  388.5  22.6  264  153-417     8-299 (346)
 85 3hko_A Calcium/calmodulin-depe 100.0 3.3E-49 1.1E-53  390.8  18.7  264  154-417    25-338 (345)
 86 3mwu_A Calmodulin-domain prote 100.0 1.2E-48   4E-53  405.8  23.5  259  154-417    21-284 (486)
 87 3i6u_A CDS1, serine/threonine- 100.0 8.4E-49 2.9E-53  399.6  22.0  262  154-416   134-406 (419)
 88 1cm8_A Phosphorylated MAP kina 100.0 1.6E-48 5.3E-53  390.8  23.3  257  153-416    23-314 (367)
 89 3mtl_A Cell division protein k 100.0 4.2E-49 1.4E-53  387.9  18.8  260  155-419     2-291 (324)
 90 2jam_A Calcium/calmodulin-depe 100.0 4.7E-48 1.6E-52  376.3  25.7  259  154-419     8-271 (304)
 91 2ac3_A MAP kinase-interacting  100.0 1.7E-48 5.6E-53  381.2  22.4  257  154-417    11-303 (316)
 92 3pfq_A PKC-B, PKC-beta, protei 100.0 1.8E-48 6.1E-53  419.2  24.9  259  153-416   339-604 (674)
 93 1u5q_A Serine/threonine protei 100.0 3.1E-48 1.1E-52  385.9  24.7  258  155-418    54-314 (348)
 94 2acx_A G protein-coupled recep 100.0 1.1E-48 3.7E-53  410.9  22.5  260  152-416   181-451 (576)
 95 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-48 5.6E-53  387.1  22.0  253  154-416    21-284 (342)
 96 3kn6_A Ribosomal protein S6 ki 100.0   2E-48   7E-53  383.5  22.4  254  156-418     9-279 (325)
 97 2zmd_A Dual specificity protei 100.0 4.6E-48 1.6E-52  390.5  25.5  259  153-417    54-328 (390)
 98 3llt_A Serine/threonine kinase 100.0   3E-48   1E-52  386.7  23.8  253  152-414    32-360 (360)
 99 3p86_A Serine/threonine-protei 100.0 2.4E-48 8.3E-53  380.3  22.6  261  151-417    33-301 (309)
100 3lij_A Calcium/calmodulin depe 100.0 2.4E-48 8.3E-53  404.3  23.8  256  155-415    37-297 (494)
101 3dbq_A Dual specificity protei 100.0 4.9E-48 1.7E-52  383.2  24.9  259  152-416     6-280 (343)
102 3ttj_A Mitogen-activated prote 100.0 2.7E-48 9.2E-53  400.9  23.5  255  154-415    61-361 (464)
103 3fme_A Dual specificity mitoge 100.0 3.4E-48 1.1E-52  373.9  22.5  260  153-416     5-273 (290)
104 3nyv_A Calmodulin-domain prote 100.0 1.1E-48 3.9E-53  405.6  20.6  259  154-416    25-288 (484)
105 3bhy_A Death-associated protei 100.0 2.8E-48 9.7E-53  373.3  21.6  261  155-416     5-272 (283)
106 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-48 1.2E-52  404.2  23.9  263  153-417    34-309 (504)
107 3eqc_A Dual specificity mitoge 100.0 3.9E-48 1.3E-52  386.0  23.2  259  153-417    31-332 (360)
108 3an0_A Dual specificity mitoge 100.0 2.2E-48 7.6E-53  384.6  21.0  264  151-419    47-320 (340)
109 3ork_A Serine/threonine protei 100.0 6.5E-49 2.2E-53  384.0  16.5  261  152-415     9-279 (311)
110 4aaa_A Cyclin-dependent kinase 100.0 1.4E-48 4.9E-53  384.9  18.9  261  153-416    23-313 (331)
111 3qyz_A Mitogen-activated prote 100.0 1.5E-47 5.1E-52  382.8  26.6  258  153-416    25-320 (364)
112 2ycf_A Serine/threonine-protei 100.0 3.2E-48 1.1E-52  380.8  20.8  261  155-416    10-281 (322)
113 2x7f_A TRAF2 and NCK-interacti 100.0   7E-48 2.4E-52  378.4  23.0  262  151-418    20-295 (326)
114 3eb0_A Putative uncharacterize 100.0 7.7E-48 2.6E-52  387.6  23.6  254  153-416     5-328 (383)
115 2r3i_A Cell division protein k 100.0 1.7E-47 5.7E-52  370.8  25.2  259  155-417     3-291 (299)
116 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.1E-48 2.4E-52  403.3  23.8  259  153-416   183-455 (543)
117 3kvw_A DYRK2, dual specificity 100.0 2.6E-47   9E-52  389.7  27.1  256  153-418    95-417 (429)
118 3mi9_A Cell division protein k 100.0 5.6E-48 1.9E-52  383.5  21.4  260  154-417    16-319 (351)
119 3lm5_A Serine/threonine-protei 100.0   6E-48 2.1E-52  380.1  20.8  260  155-418    28-296 (327)
120 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-47 4.4E-52  372.9  22.7  257  153-416    20-277 (303)
121 4eqm_A Protein kinase; transfe 100.0 2.8E-47 9.5E-52  369.8  25.0  259  153-414     9-272 (294)
122 3qup_A Tyrosine-protein kinase 100.0 1.9E-47 6.3E-52  375.1  23.7  268  150-422    18-311 (323)
123 3nsz_A CK II alpha, casein kin 100.0 3.7E-47 1.3E-51  373.8  25.4  254  153-417    34-327 (330)
124 4euu_A Serine/threonine-protei 100.0 9.2E-48 3.1E-52  377.0  21.0  256  153-412     7-305 (319)
125 1j1b_A Glycogen synthase kinas 100.0 1.1E-47 3.9E-52  391.4  22.3  252  155-416    54-343 (420)
126 2w5a_A Serine/threonine-protei 100.0 1.2E-47   4E-52  368.3  21.1  258  154-416     5-274 (279)
127 2wei_A Calmodulin-domain prote 100.0 1.1E-47 3.8E-52  370.6  21.0  257  155-416    22-283 (287)
128 2psq_A Fibroblast growth facto 100.0 4.7E-47 1.6E-51  380.5  26.0  252  153-410    79-358 (370)
129 2wtk_C Serine/threonine-protei 100.0 2.8E-47 9.6E-52  370.3  23.3  262  154-419     4-273 (305)
130 2vwi_A Serine/threonine-protei 100.0 8.2E-48 2.8E-52  373.2  19.2  262  152-417    12-295 (303)
131 3s95_A LIMK-1, LIM domain kina 100.0 2.1E-47 7.1E-52  372.8  22.2  250  154-409     9-275 (310)
132 3kul_A Ephrin type-A receptor  100.0 4.1E-47 1.4E-51  374.0  24.4  252  152-409    46-306 (325)
133 2j7t_A Serine/threonine-protei 100.0 2.3E-47 7.7E-52  370.5  21.9  263  151-418    15-284 (302)
134 1blx_A Cyclin-dependent kinase 100.0 8.4E-47 2.9E-51  370.4  26.1  261  154-419    10-306 (326)
135 2xrw_A Mitogen-activated prote 100.0 3.7E-47 1.3E-51  381.2  23.9  256  154-416    24-325 (371)
136 3byv_A Rhoptry kinase; malaria 100.0 1.6E-48 5.4E-53  391.8  13.6  252  153-416    71-366 (377)
137 2b9h_A MAP kinase FUS3, mitoge 100.0 7.8E-47 2.7E-51  375.0  25.4  260  152-417     8-313 (353)
138 2fst_X Mitogen-activated prote 100.0 7.1E-48 2.4E-52  386.1  18.1  256  154-416    28-318 (367)
139 1vzo_A Ribosomal protein S6 ki 100.0 9.4E-48 3.2E-52  383.3  18.8  260  154-416    53-328 (355)
140 4e7w_A Glycogen synthase kinas 100.0 5.6E-47 1.9E-51  383.1  24.1  254  154-418    39-330 (394)
141 2clq_A Mitogen-activated prote 100.0 6.1E-47 2.1E-51  365.9  23.1  259  156-419    23-288 (295)
142 3com_A Serine/threonine-protei 100.0 5.3E-47 1.8E-51  370.1  22.7  259  152-418    26-287 (314)
143 3vhe_A Vascular endothelial gr 100.0 2.5E-47 8.6E-52  379.4  20.4  253  153-410    20-349 (359)
144 3e3p_A Protein kinase, putativ 100.0 1.1E-47 3.6E-52  382.2  17.7  257  154-417    22-322 (360)
145 4exu_A Mitogen-activated prote 100.0 5.4E-47 1.9E-51  379.9  22.7  256  154-417    41-331 (371)
146 2i6l_A Mitogen-activated prote 100.0 3.4E-47 1.2E-51  371.4  20.2  257  153-416     9-312 (320)
147 1zy4_A Serine/threonine-protei 100.0 1.3E-46 4.4E-51  364.2  23.6  253  155-416     6-290 (303)
148 3pg1_A Mitogen-activated prote 100.0   7E-47 2.4E-51  377.0  21.2  263  153-417    20-324 (362)
149 3q60_A ROP5B; pseudokinase, tr 100.0 3.7E-47 1.3E-51  380.9  19.1  257  155-416    62-359 (371)
150 3l9p_A Anaplastic lymphoma kin 100.0 6.6E-47 2.2E-51  379.0  20.9  257  152-414    68-343 (367)
151 1z57_A Dual specificity protei 100.0 2.2E-46 7.4E-51  368.3  23.7  254  153-416    12-335 (339)
152 1luf_A Muscle-specific tyrosin 100.0 1.6E-46 5.3E-51  371.1  22.5  253  152-410    44-329 (343)
153 3coi_A Mitogen-activated prote 100.0 1.8E-46 6.2E-51  373.1  23.0  256  154-417    23-313 (353)
154 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-46 7.1E-51  365.4  23.0  253  152-410    20-305 (314)
155 3cbl_A C-FES, proto-oncogene t 100.0 7.7E-47 2.6E-51  379.7  20.5  252  152-409   111-367 (377)
156 2iwi_A Serine/threonine-protei 100.0 3.4E-47 1.2E-51  371.4  17.3  257  152-417    28-291 (312)
157 4hcu_A Tyrosine-protein kinase 100.0 2.2E-46 7.6E-51  357.9  22.2  249  153-410     8-260 (269)
158 2pml_X PFPK7, Ser/Thr protein  100.0 1.5E-46   5E-51  372.3  21.6  259  154-417    30-330 (348)
159 3gen_A Tyrosine-protein kinase 100.0   2E-46 6.8E-51  360.7  21.8  250  152-410    21-274 (283)
160 3cek_A Dual specificity protei 100.0 3.3E-46 1.1E-50  364.8  23.5  262  152-419    25-302 (313)
161 3dtc_A Mitogen-activated prote 100.0   3E-46   1E-50  356.9  22.5  252  153-410     5-267 (271)
162 1wak_A Serine/threonine-protei 100.0 6.6E-47 2.3E-51  380.7  18.5  252  154-415    36-397 (397)
163 3tt0_A Basic fibroblast growth 100.0 1.3E-45 4.5E-50  371.3  27.7  253  152-410    66-346 (382)
164 3rgf_A Cyclin-dependent kinase 100.0   1E-46 3.5E-51  382.2  19.6  255  155-417    20-341 (405)
165 3aln_A Dual specificity mitoge 100.0 3.8E-46 1.3E-50  366.6  23.0  258  153-416    20-292 (327)
166 3poz_A Epidermal growth factor 100.0 3.2E-46 1.1E-50  367.7  22.1  251  153-410    13-272 (327)
167 1mp8_A Focal adhesion kinase 1 100.0 4.7E-46 1.6E-50  358.1  22.7  252  152-410    12-270 (281)
168 1t46_A HOMO sapiens V-KIT hard 100.0 3.8E-46 1.3E-50  363.4  22.1  254  152-410    20-301 (313)
169 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-46 1.3E-50  355.8  21.5  249  153-410     6-258 (268)
170 1rjb_A FL cytokine receptor; k 100.0 3.2E-46 1.1E-50  369.5  21.3  254  153-411    43-329 (344)
171 4f0f_A Serine/threonine-protei 100.0 2.1E-45 7.2E-50  354.2  26.2  253  152-409    16-282 (287)
172 3a99_A Proto-oncogene serine/t 100.0   2E-46 6.9E-51  368.1  19.2  257  152-417    40-301 (320)
173 2ozo_A Tyrosine-protein kinase 100.0 1.4E-45 4.8E-50  392.9  27.0  249  154-409   334-591 (613)
174 1fvr_A Tyrosine-protein kinase 100.0 5.2E-46 1.8E-50  365.8  21.9  253  152-410    22-294 (327)
175 3kfa_A Tyrosine-protein kinase 100.0 8.5E-46 2.9E-50  356.9  22.7  250  152-409    10-264 (288)
176 2dyl_A Dual specificity mitoge 100.0 9.7E-46 3.3E-50  361.3  23.2  258  154-416    24-290 (318)
177 3kmu_A ILK, integrin-linked ki 100.0 1.4E-45 4.7E-50  351.5  23.6  249  152-409     7-263 (271)
178 3lb7_A RAF proto-oncogene seri 100.0 3.1E-45 1.1E-49  357.8  25.9  255  152-413    33-297 (307)
179 2vx3_A Dual specificity tyrosi 100.0 7.6E-46 2.6E-50  373.0  22.2  254  153-416    52-379 (382)
180 3fhr_A MAP kinase-activated pr 100.0   5E-46 1.7E-50  368.0  20.4  254  152-416    25-294 (336)
181 3ugc_A Tyrosine-protein kinase 100.0 7.1E-46 2.4E-50  359.2  21.1  251  152-409     7-284 (295)
182 2izr_A Casein kinase I isoform 100.0 1.5E-45 5.1E-50  363.2  23.7  247  153-409     7-274 (330)
183 3kex_A Receptor tyrosine-prote 100.0 1.8E-46 6.1E-51  369.1  16.5  251  153-410    11-270 (325)
184 2eu9_A Dual specificity protei 100.0 6.9E-46 2.4E-50  367.4  20.7  259  153-421    17-345 (355)
185 2h34_A Serine/threonine-protei 100.0   3E-45   1E-49  357.9  24.7  253  154-409    33-289 (309)
186 3lzb_A Epidermal growth factor 100.0 1.2E-45 4.2E-50  363.8  22.0  255  153-410    13-272 (327)
187 1q8y_A SR protein kinase; tran 100.0   6E-46   2E-50  371.1  19.8  257  154-420    18-344 (373)
188 4fvq_A Tyrosine-protein kinase 100.0 4.6E-46 1.6E-50  359.0  17.9  247  153-410     6-269 (289)
189 1xbb_A Tyrosine-protein kinase 100.0 2.6E-45 8.9E-50  354.7  23.1  252  152-409    13-272 (291)
190 2xir_A Vascular endothelial gr 100.0 9.6E-46 3.3E-50  361.0  20.2  253  153-410    25-304 (316)
191 2i1m_A Macrophage colony-stimu 100.0 1.7E-45 5.8E-50  362.7  21.7  254  152-410    43-320 (333)
192 1mqb_A Ephrin type-A receptor  100.0 7.8E-45 2.7E-49  358.9  26.4  253  152-410    41-303 (333)
193 2qol_A Ephrin receptor; recept 100.0   1E-45 3.4E-50  371.3  20.3  251  153-409    43-302 (373)
194 2pvf_A Fibroblast growth facto 100.0 2.7E-45 9.4E-50  361.9  23.1  252  153-410    33-312 (334)
195 2wqm_A Serine/threonine-protei 100.0 1.2E-44 4.2E-49  353.0  27.4  255  153-410    30-291 (310)
196 1csn_A Casein kinase-1; phosph 100.0 2.6E-45   9E-50  355.0  22.2  249  153-410     8-277 (298)
197 1k9a_A Carboxyl-terminal SRC k 100.0 4.7E-45 1.6E-49  375.3  25.3  245  152-409   190-438 (450)
198 1p4o_A Insulin-like growth fac 100.0 3.9E-45 1.3E-49  358.1  23.2  253  152-410    22-293 (322)
199 1opk_A P150, C-ABL, proto-onco 100.0 2.5E-45 8.7E-50  381.7  23.0  250  152-409   217-471 (495)
200 3t9t_A Tyrosine-protein kinase 100.0 2.8E-45 9.6E-50  349.2  21.0  249  153-410     6-258 (267)
201 4e5w_A Tyrosine-protein kinase 100.0 4.4E-45 1.5E-49  354.3  22.6  252  153-409    19-295 (302)
202 1qcf_A Haematopoetic cell kina 100.0 4.6E-45 1.6E-49  375.7  23.7  249  151-409   184-437 (454)
203 3soc_A Activin receptor type-2 100.0 1.6E-45 5.6E-50  361.9  19.4  249  152-409    21-311 (322)
204 2yfx_A Tyrosine-protein kinase 100.0 2.2E-45 7.7E-50  361.3  20.0  257  152-414    27-302 (327)
205 3brb_A Proto-oncogene tyrosine 100.0 9.8E-45 3.3E-49  354.1  24.0  256  150-410    29-302 (313)
206 3lxl_A Tyrosine-protein kinase 100.0 6.3E-45 2.2E-49  358.0  22.5  253  152-410    20-297 (327)
207 3cc6_A Protein tyrosine kinase 100.0 1.3E-44 4.3E-49  347.9  24.0  251  153-410    10-267 (281)
208 1u59_A Tyrosine-protein kinase 100.0 8.8E-45   3E-49  350.3  22.9  252  154-412     8-268 (287)
209 3op5_A Serine/threonine-protei 100.0 1.1E-45 3.9E-50  369.2  17.1  255  153-409    33-322 (364)
210 2v62_A Serine/threonine-protei 100.0 1.2E-45 4.1E-50  366.3  17.2  256  152-410    34-322 (345)
211 3pls_A Macrophage-stimulating  100.0 2.8E-44 9.6E-49  347.7  26.4  249  156-410    22-281 (298)
212 2qkw_B Protein kinase; three-h 100.0 8.1E-46 2.8E-50  363.5  15.0  254  151-411    35-310 (321)
213 2a19_B Interferon-induced, dou 100.0 3.7E-45 1.3E-49  351.2  19.2  246  154-415    10-273 (284)
214 3og7_A AKAP9-BRAF fusion prote 100.0 9.2E-45 3.2E-49  350.7  22.0  252  151-409    20-281 (289)
215 3f66_A Hepatocyte growth facto 100.0 2.5E-44 8.4E-49  348.6  24.4  249  155-409    25-284 (298)
216 2buj_A Serine/threonine-protei 100.0 8.8E-45   3E-49  354.9  20.8  252  153-410    27-300 (317)
217 4eut_A Serine/threonine-protei 100.0 2.6E-45 8.8E-50  371.0  17.0  253  153-409     7-302 (396)
218 3ll6_A Cyclin G-associated kin 100.0 1.4E-44 4.7E-49  355.5  21.6  249  153-411    26-303 (337)
219 4fl3_A Tyrosine-protein kinase 100.0 3.5E-44 1.2E-48  383.4  25.9  247  157-409   370-624 (635)
220 1u46_A ACK-1, activated CDC42  100.0 8.9E-45 3.1E-49  350.0  18.7  255  152-410    15-278 (291)
221 1qpc_A LCK kinase; alpha beta  100.0 2.4E-44 8.4E-49  345.4  21.7  248  152-409    10-262 (279)
222 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-44 9.1E-49  369.9  23.4  256  152-417   181-443 (452)
223 3uim_A Brassinosteroid insensi 100.0 2.4E-45 8.3E-50  360.5  14.5  256  152-413    27-308 (326)
224 3c1x_A Hepatocyte growth facto 100.0 1.3E-44 4.6E-49  363.1  20.1  250  155-410    89-349 (373)
225 1byg_A CSK, protein (C-termina 100.0 2.4E-44 8.1E-49  345.5  20.4  244  153-409    19-266 (278)
226 4hgt_A Casein kinase I isoform 100.0 3.9E-44 1.3E-48  346.2  21.6  248  153-409     7-273 (296)
227 3q4u_A Activin receptor type-1 100.0 2.7E-44 9.1E-49  348.4  20.3  246  153-409     6-295 (301)
228 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-43 3.8E-48  343.2  24.3  248  153-409     7-273 (296)
229 2h8h_A Proto-oncogene tyrosine 100.0 2.6E-44 8.7E-49  377.6  21.1  255  153-417   265-526 (535)
230 3lxp_A Non-receptor tyrosine-p 100.0 3.4E-44 1.1E-48  351.8  20.1  248  156-409    32-303 (318)
231 2eva_A TAK1 kinase - TAB1 chim 100.0 7.9E-44 2.7E-48  347.6  21.5  243  153-410     6-257 (307)
232 2jii_A Serine/threonine-protei 100.0 3.8E-44 1.3E-48  356.4  18.8  246  153-410    40-330 (352)
233 3g2f_A Bone morphogenetic prot 100.0 9.9E-44 3.4E-48  350.2  21.0  257  152-417    10-325 (336)
234 3m2w_A MAP kinase-activated pr 100.0 1.8E-43 6.3E-48  343.4  22.5  231  155-417    17-264 (299)
235 3p23_A Serine/threonine-protei 100.0 6.3E-44 2.1E-48  365.0  20.1  252  153-415    22-289 (432)
236 2rio_A Serine/threonine-protei 100.0 2.1E-43   7E-48  361.4  22.7  253  152-415    12-301 (434)
237 3mdy_A Bone morphogenetic prot 100.0   3E-43   1E-47  346.4  22.9  245  154-410    36-325 (337)
238 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.9E-44 6.5E-49  352.6  14.0  253  151-410    29-296 (319)
239 2nru_A Interleukin-1 receptor- 100.0 1.4E-43 4.7E-48  344.8  19.5  250  156-410    32-300 (307)
240 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-43 5.6E-48  348.0  20.0  250  153-409    39-315 (326)
241 3sv0_A Casein kinase I-like; t 100.0 5.9E-43   2E-47  362.1  23.7  248  153-409     5-271 (483)
242 3e7e_A HBUB1, BUB1A, mitotic c 100.0   2E-43 6.8E-48  352.9  17.7  243  152-409    62-331 (365)
243 3qa8_A MGC80376 protein; kinas 100.0 4.2E-44 1.5E-48  380.2  12.6  256  155-415    14-303 (676)
244 1b6c_B TGF-B superfamily recep 100.0 1.4E-42 4.6E-47  342.7  22.4  245  155-410    42-330 (342)
245 2j0j_A Focal adhesion kinase 1 100.0 1.9E-42 6.5E-47  371.2  23.2  250  153-409   388-644 (656)
246 3uqc_A Probable conserved tran 100.0 1.2E-41 4.2E-46  329.2  24.6  226  153-410    29-259 (286)
247 3dzo_A Rhoptry kinase domain;  100.0 4.2E-43 1.4E-47  356.9  15.0  250  155-416    78-370 (413)
248 3gxj_A TGF-beta receptor type- 100.0 1.3E-44 4.6E-49  350.6   3.6  245  154-409     2-290 (303)
249 2vuw_A Serine/threonine-protei 100.0 5.3E-44 1.8E-48  353.0   1.4  247  154-414    19-336 (336)
250 2pzi_A Probable serine/threoni 100.0 1.5E-41 5.3E-46  366.3  14.0  242  153-414    78-325 (681)
251 4azs_A Methyltransferase WBDD; 100.0 8.3E-35 2.8E-39  306.9   3.7  189  162-355   241-436 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 6.1E-29 2.1E-33  260.6   8.7  189  158-358   339-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.7E-25 5.8E-30  215.6   8.0  150  155-329    90-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.3E-21 4.4E-26  185.9  10.0  144  155-307    47-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 3.8E-18 1.3E-22  169.8   8.7  144  155-307    95-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 8.1E-13 2.8E-17  124.8   9.7  138  156-305    15-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 1.7E-11 5.9E-16  114.8   9.2  134  156-306    21-214 (264)
258 3dxp_A Putative acyl-COA dehyd  99.1 7.3E-11 2.5E-15  116.7   9.0  140  159-306    42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 1.4E-10 4.6E-15  112.1   6.4  180  161-357    26-287 (304)
260 3r70_A Aminoglycoside phosphot  98.9 9.1E-09 3.1E-13  100.1  11.7  133  157-307    39-238 (320)
261 3tdw_A Gentamicin resistance p  98.7 1.7E-07 5.8E-12   90.5  14.9  134  160-307    24-225 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.7 2.3E-07 7.8E-12   87.4  13.6  132  163-306    32-223 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.4 8.5E-07 2.9E-11   87.7  10.3   75  158-244    44-121 (362)
264 3d1u_A Putative fructosamine-3  98.3   1E-06 3.5E-11   84.3   8.6   79  156-244    16-97  (288)
265 2olc_A MTR kinase, methylthior  98.3 1.2E-06 4.2E-11   87.4   7.4   81  160-242    35-120 (397)
266 2q83_A YTAA protein; 2635576,   98.2 2.4E-05 8.3E-10   75.7  14.6   30  276-305   222-251 (346)
267 3ats_A Putative uncharacterize  98.1 1.1E-06 3.8E-11   86.3   2.9   86  157-244    22-120 (357)
268 2yle_A Protein spire homolog 1  97.9 0.00012 3.9E-09   66.3  13.1  137  241-410    32-195 (229)
269 2pyw_A Uncharacterized protein  97.8 8.6E-05 2.9E-09   74.6  10.4   78  275-353   231-312 (420)
270 3dxq_A Choline/ethanolamine ki  97.6 8.1E-05 2.8E-09   71.2   7.2   71  160-244    23-95  (301)
271 3jr1_A Putative fructosamine-3  97.5 0.00078 2.7E-08   64.9  13.0   76  159-244    40-118 (312)
272 3f7w_A Putative fructosamine-3  97.5 0.00031 1.1E-08   66.6   8.9   80  154-243    14-96  (288)
273 1zyl_A Hypothetical protein YI  97.4 0.00045 1.5E-08   66.5   9.0   75  161-243    32-113 (328)
274 3csv_A Aminoglycoside phosphot  97.4 0.00045 1.5E-08   66.9   9.0   31  276-306   183-217 (333)
275 2ppq_A HSK, HK, homoserine kin  97.4 0.00091 3.1E-08   64.2  10.9  140  157-305    24-216 (322)
276 3feg_A Choline/ethanolamine ki  97.1  0.0004 1.4E-08   68.8   5.1  135  161-305    56-253 (379)
277 1nw1_A Choline kinase (49.2 KD  97.0  0.0007 2.4E-08   68.3   6.4   73  160-243    78-158 (429)
278 3c5i_A Choline kinase; choline  96.9 0.00053 1.8E-08   67.4   4.2   74  160-243    38-120 (369)
279 2qg7_A Ethanolamine kinase PV0  96.6   0.012 3.9E-07   59.8  11.3   75  160-244   113-188 (458)
280 3i1a_A Spectinomycin phosphotr  96.6   0.015 5.2E-07   56.3  11.7   30  277-306   207-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  96.2   0.011 3.7E-07   58.8   8.6   29  277-305   245-279 (401)
282 3mes_A Choline kinase; malaria  94.2    0.25 8.6E-06   49.3  11.0   74  160-243    75-156 (424)
283 3g15_A CK, chetk-alpha, cholin  93.9    0.15 5.1E-06   50.5   8.6   28  278-305   246-279 (401)
284 3cxl_A N-chimerin; SH2, RHO-GA  83.8   0.096 3.3E-06   53.0  -2.5   62  160-227   147-214 (463)
285 2x6h_A GH13170P, VPS34, phosph  82.9      20 0.00068   37.8  14.5   79  222-305   478-575 (696)
286 4ann_A ESSB; membrane protein,  81.7     2.6 8.8E-05   37.7   6.3  115  215-358    43-158 (215)
287 4ano_A ESSB; membrane protein,  81.5     5.1 0.00018   35.9   8.2  115  215-358    48-163 (219)
288 3ls8_A Phosphatidylinositol 3-  79.6      40  0.0014   34.9  15.2   81  220-305   402-501 (614)
289 1cja_A Protein (actin-fragmin   69.7      67  0.0023   30.6  12.8  137  157-306    71-237 (342)
290 2y3a_A Phosphatidylinositol-4,  52.1 1.5E+02  0.0053   32.8  13.5   25  281-305   940-964 (1092)
291 3eps_A Isocitrate dehydrogenas  40.6 2.3E+02   0.008   28.7  11.5  139  163-309   314-484 (578)
292 1e7u_A Phosphatidylinositol 3-  37.2 1.8E+02  0.0062   31.8  11.0   25  281-305   804-828 (961)
293 2wxf_A Phosphatidylinositol-4,  32.0 1.6E+02  0.0053   32.2   9.5   25  281-305   788-812 (940)
294 3hhm_A Phosphatidylinositol-4,  32.0 2.3E+02  0.0078   31.5  10.7   25  281-305   937-961 (1091)

No 1  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.9e-63  Score=484.70  Aligned_cols=258  Identities=29%  Similarity=0.505  Sum_probs=230.4

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+..  .......+.+.+|+.+|++++|||||++++++++++.+|+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHH--CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            57999999999999999999999999999999987421  1122335678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC---
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS---  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~---  311 (444)
                      |||||+||+|.+++++.+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+....   
T Consensus       110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            99999999999999998999999999999999999999999999999999999999999999999999999875432   


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~  391 (444)
                      ...+.+||+.|||||++.+.. |+.++|||||||++|||++|+.||...+....+.++....  ..+|..+++++++||+
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~  266 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--YDFPEKFFPKARDLVE  266 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTCCHHHHHHHH
T ss_pred             cccCcccCcccCCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCcccCHHHHHHHH
Confidence            334678999999999997665 8999999999999999999999998876666666665544  3578899999999999


Q ss_pred             HHhhhCCCCCcCHHH------HHhCCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAW------LLEHPFVGNAA  417 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~e------lL~hp~~~~~~  417 (444)
                      +||++||++|||++|      |++||||++..
T Consensus       267 ~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          267 KLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             HHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            999999999999886      79999999753


No 2  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.7e-62  Score=471.32  Aligned_cols=257  Identities=28%  Similarity=0.492  Sum_probs=213.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|++.+.||+|+||+||+|+++.+|+.||||++....  .......+.+.+|+.+|++++|||||++++++.+++.+|+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV--LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHH--cCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            47999999999999999999999999999999987422  2223345678999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCcc
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCPL  314 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~  314 (444)
                      ||||| +|+|.+++.+++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus        91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~  169 (275)
T 3hyh_A           91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK  169 (275)
T ss_dssp             EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence            99999 78999999998899999999999999999999999999999999999999999999999999999876666666


Q ss_pred             cccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHh
Q 013354          315 SIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCL  394 (444)
Q Consensus       315 ~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L  394 (444)
                      +.+||+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+....  ..+|..+++++++||++||
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L  247 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRML  247 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHHHHHHS
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHc
Confidence            77899999999999877645789999999999999999999998766555555555443  3577889999999999999


Q ss_pred             hhCCCCCcCHHHHHhCCCCCCC
Q 013354          395 QRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       395 ~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++||++|||++|+|+||||+..
T Consensus       248 ~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          248 IVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             CSSGGGSCCHHHHHHCHHHHTT
T ss_pred             cCChhHCcCHHHHHcCcccccC
Confidence            9999999999999999999754


No 3  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2.3e-62  Score=483.93  Aligned_cols=258  Identities=34%  Similarity=0.571  Sum_probs=227.5

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||++.+....     ..+.+.+|+.+|++++|||||++++++.+++.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            35799999999999999999999999999999999753221     2346789999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||||+||+|.+++.+ +.+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+.... .
T Consensus       148 ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             EEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence            99999999999999986 679999999999999999999999999999999999999999999999999999875543 3


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC-CCCCCCCCCHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE-LPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~s~~l~~Li~  391 (444)
                      ..+.+||+.|||||++.+.. |+.++|||||||++|||++|++||...+....+..+..... ....+..+++++++||.
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  305 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  305 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence            45678999999999997665 89999999999999999999999988776666666544322 12334578999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      +||++||++|||++|+|+||||++..+
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            999999999999999999999987643


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.5e-62  Score=483.29  Aligned_cols=258  Identities=30%  Similarity=0.549  Sum_probs=224.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++.+..   ......+.+.+|+.+|++|+|||||++++++.+++.+|
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR---MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY   99 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT---SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH---CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence            468999999999999999999999999999999997532   23445678999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          234 IYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ||||||+||+|.++|...+  .+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+....
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            9999999999999997643  47999999999999999999999999999999999999999999999999998765432


Q ss_pred             -CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          312 -CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       312 -~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                       .....+||+.|||||++.+.. |+.++|||||||+||||++|+.||...+....+.++..... +.++..+++++++||
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~s~~~~~li  257 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPVSLHYSYDLRSLV  257 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCCTTSCHHHHHHH
T ss_pred             ccccccCCCccccCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccCCHHHHHHH
Confidence             223467999999999998765 99999999999999999999999988776666666665543 567788999999999


Q ss_pred             HHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .+||++||++|||++|+|+||||++.
T Consensus       258 ~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          258 SQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HHHccCChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999999999753


No 5  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=6.3e-61  Score=464.06  Aligned_cols=254  Identities=29%  Similarity=0.523  Sum_probs=220.5

Q ss_pred             eeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc----CCEE
Q 013354          157 WKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL----DDKL  232 (444)
Q Consensus       157 ~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----~~~~  232 (444)
                      |++.+.||+|+||+||+|+++.++..||+|++...   .......+.+.+|+.+|++++|||||++++++..    +..+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~---~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~  104 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR---KLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG---GSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchh---hCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence            47888999999999999999999999999998642   2344556789999999999999999999999865    3568


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEEC-CCCcEEEEeccccccccC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVD-PSGRVKLADFGMAKHITG  309 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~-~~~~vkL~DFGla~~~~~  309 (444)
                      |||||||+||+|.+++++.+.+++..++.++.||+.||+|||+++  ||||||||+||||+ .++.+||+|||+|+....
T Consensus       105 ~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            999999999999999999889999999999999999999999998  99999999999997 478999999999986543


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhh-HHhcCCCCCCCCCCCCCHHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAM-FKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                       ....+.+||+.|||||++.+ . |+.++|||||||+||||++|+.||........+ ..+......+.++..+++++++
T Consensus       185 -~~~~~~~GTp~YmAPE~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  261 (290)
T 3fpq_A          185 -SFAKAVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE  261 (290)
T ss_dssp             -TSBEESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred             -CccCCcccCccccCHHHcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHH
Confidence             33456789999999999864 4 899999999999999999999999876655444 4444444444566778999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||.+||++||++|||++|+|+||||++.
T Consensus       262 li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          262 IIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999864


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.5e-61  Score=489.46  Aligned_cols=258  Identities=34%  Similarity=0.571  Sum_probs=228.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ...|++.+.||+|+||.||+|+++.+|+.||||++.+....     ..+.+.+|+.+|+.++|||||++++++..++.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-----HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEE
Confidence            45799999999999999999999999999999999753221     2346789999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||||+||+|.++++. +.+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+.... .
T Consensus       225 iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             EEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred             EEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence            99999999999999976 579999999999999999999999999999999999999999999999999999875543 3


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC-CCCCCCCCCHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE-LPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~s~~l~~Li~  391 (444)
                      ....+||+.|||||++.+.. |+.++|||||||++|||++|+.||.+.+....+..+..... ....+..+++++++||.
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence            45678999999999997665 89999999999999999999999988776666666544322 22345678999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      +||++||++|||++|+|+||||++..+
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            999999999999999999999987543


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=3.5e-61  Score=468.32  Aligned_cols=257  Identities=28%  Similarity=0.474  Sum_probs=220.8

Q ss_pred             CCCeeeeeeecccCceEEEEEEEc---CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNS---ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~---~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .++|++.+.||+|+||+||+|++.   .+++.||||+++........   ..++.+|+.+|++++|||||++++++.+++
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD---RVRTKMERDILVEVNHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE---CC------CCCCCCCCTTEECEEEEEEETT
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH---HHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            468999999999999999999884   46889999998753222111   235778999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-  309 (444)
                      .+|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.... 
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence            9999999999999999999989999999999999999999999999999999999999999999999999999986543 


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDF  389 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~L  389 (444)
                      .....+.+||+.|||||++.+.. |+.++|||||||++|||++|+.||...+..+.+..+....  ..+|..+++++++|
T Consensus       180 ~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  256 (304)
T 3ubd_A          180 EKKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFLSPEAQSL  256 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             CccccccccCcccCCHHHhccCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC--CCCCCcCCHHHHHH
Confidence            33445678999999999997766 8999999999999999999999998877666666665543  35788899999999


Q ss_pred             HHHHhhhCCCCCcC-----HHHHHhCCCCCCC
Q 013354          390 VRKCLQRNPLHRPT-----AAWLLEHPFVGNA  416 (444)
Q Consensus       390 i~~~L~~dP~~Rpt-----~~elL~hp~~~~~  416 (444)
                      |++||++||++|||     ++|+++||||++.
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            99999999999998     5899999999975


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=5e-60  Score=465.75  Aligned_cols=251  Identities=32%  Similarity=0.539  Sum_probs=220.4

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ..|++.+.||+|+||.||+|+++.+|+.||||++++...          ..+|+.+|+.++|||||++++++.+++.+||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            569999999999999999999999999999999974211          2369999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC-cEEEEeccccccccCCCC-
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG-RVKLADFGMAKHITGQSC-  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~vkL~DFGla~~~~~~~~-  312 (444)
                      |||||+||+|.++|++.+.+++..++.++.||+.||+|||++|||||||||+||||+.++ .+||+|||+|+.+..... 
T Consensus       128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            999999999999999989999999999999999999999999999999999999999887 599999999987654321 


Q ss_pred             -----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC-CCCCCCCCCHHH
Q 013354          313 -----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE-LPAIPDHLSDEG  386 (444)
Q Consensus       313 -----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~s~~l  386 (444)
                           ....+||+.|||||++.+.. |+.++|||||||+||||++|+.||........+.++..... ...++..+++++
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~  286 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLT  286 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHH
T ss_pred             cceecCCccccCccccCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHH
Confidence                 22357999999999998765 99999999999999999999999988776666666554432 235778899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHH-------------HhCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWL-------------LEHPFVGNA  416 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~el-------------L~hp~~~~~  416 (444)
                      ++||.+||++||++|||+.||             |+|||+.+.
T Consensus       287 ~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          287 AQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            999999999999999999998             579998764


No 9  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-58  Score=465.93  Aligned_cols=260  Identities=23%  Similarity=0.399  Sum_probs=221.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc----
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL----  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----  228 (444)
                      .+++|++.+.||+|+||+||+|+++.+|+.||||+++..   .......+.+.+|+.+|+.++|||||++++++..    
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~---~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA---FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTT---TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcc---ccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc
Confidence            457899999999999999999999999999999998642   2334456788899999999999999999998653    


Q ss_pred             --CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          229 --DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       229 --~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                        .+.+|||||||. |+|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence              367999999995 68999999888999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCC-----CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC------
Q 013354          307 ITGQ-----SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL------  375 (444)
Q Consensus       307 ~~~~-----~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~------  375 (444)
                      +...     ....+.+||+.|+|||++.+...++.++||||+||++|||++|++||...+....+..+......      
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred             cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            6432     23345789999999999987776899999999999999999999999877655555443211100      


Q ss_pred             ---------------C--------CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          376 ---------------P--------AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       376 ---------------~--------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                                     +        .+...+++++++||.+||++||++|||++|+|+||||++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence                           0        1123578999999999999999999999999999999875


No 10 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.7e-58  Score=449.89  Aligned_cols=255  Identities=25%  Similarity=0.395  Sum_probs=202.7

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC-----
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD-----  230 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----  230 (444)
                      +|++.+.||+|+||+||+|+++.+|+.||||+++..    ......+.+.+|+.+|++++|||||++++++...+     
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~----~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~   81 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP----NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL   81 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEEC----SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEecc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence            599999999999999999999999999999998753    23445578899999999999999999999987543     


Q ss_pred             -------EEEEEEeccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEe
Q 013354          231 -------KLYIYLEYVSGGSIYKILQDYGQ---LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLAD  300 (444)
Q Consensus       231 -------~~~lv~e~~~ggsL~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~D  300 (444)
                             .+|+|||||.+|+|.+++.....   ..+..++.++.||+.||+|||++|||||||||+|||++.++.+||+|
T Consensus        82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence                   47999999999999999987654   45567899999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCC-------------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC-hhhh
Q 013354          301 FGMAKHITGQSC-------------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG-VPAM  366 (444)
Q Consensus       301 FGla~~~~~~~~-------------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-~~~~  366 (444)
                      ||+|+.+.....             ....+||+.|||||++.+.. |+.++|||||||++|||++   ||..... ...+
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~  237 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFSTQMERVRTL  237 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCCccHHHHHH
Confidence            999987654321             12356999999999998765 9999999999999999996   7754221 1222


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          367 FKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       367 ~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      ..+... ..|......++++++||++||++||++|||+.|+|+||||++....
T Consensus       238 ~~~~~~-~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p  289 (299)
T 4g31_A          238 TDVRNL-KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFP  289 (299)
T ss_dssp             HHHHTT-CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC---
T ss_pred             HHHhcC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCC
Confidence            333322 2233334557788999999999999999999999999999986543


No 11 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=2.3e-57  Score=441.64  Aligned_cols=254  Identities=29%  Similarity=0.444  Sum_probs=219.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ..++|.+.+.||+|+||+||+|++.     .++..||||+++.     ......++|.+|+.+|++++|||||++++++.
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~   85 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-----ASDNARKDFHREAELLTNLQHEHIVKFYGVCV   85 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC-----CChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            4467999999999999999999875     3578999999863     23455678999999999999999999999999


Q ss_pred             cCCEEEEEEeccCCCCHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC
Q 013354          228 LDDKLYIYLEYVSGGSIYKILQDY-------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG  294 (444)
Q Consensus       228 ~~~~~~lv~e~~~ggsL~~~l~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  294 (444)
                      +++.+|||||||++|+|.++|++.             ..+++..++.++.||+.||+|||+++||||||||+||||+.++
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            999999999999999999999764             2589999999999999999999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhc
Q 013354          295 RVKLADFGMAKHITGQSCP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIG  370 (444)
Q Consensus       295 ~vkL~DFGla~~~~~~~~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  370 (444)
                      .+||+|||+|+........   ....||+.|||||++.+.. |+.++|||||||+||||+| |+.||...+..+.+..+.
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  244 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT  244 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999876443321   2345899999999998766 9999999999999999999 999999887777777776


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          371 NSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       371 ~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      .... +..|..+++++.+||.+||+.||++|||+.||++  |+++
T Consensus       245 ~~~~-~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~--~L~~  286 (299)
T 4asz_A          245 QGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT--LLQN  286 (299)
T ss_dssp             HTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             cCCC-CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH--HHHH
Confidence            6554 4678899999999999999999999999999843  5543


No 12 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.3e-56  Score=442.08  Aligned_cols=251  Identities=29%  Similarity=0.450  Sum_probs=213.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ..++|.+.+.||+|+||+||+|+++     .+++.||||+++.     ......++|.+|+.+|++++|||||++++++.
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~  113 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-----ASESARQDFQREAELLTMLQHQHIVRFFGVCT  113 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3467999999999999999999875     3688999999863     34455678999999999999999999999999


Q ss_pred             cCCEEEEEEeccCCCCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC
Q 013354          228 LDDKLYIYLEYVSGGSIYKILQDY---------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP  292 (444)
Q Consensus       228 ~~~~~~lv~e~~~ggsL~~~l~~~---------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  292 (444)
                      +.+.+|||||||++|+|.+++++.               ..+++..++.++.||+.||+|||+++||||||||+||||+.
T Consensus       114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~  193 (329)
T 4aoj_A          114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ  193 (329)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence            999999999999999999999763               34899999999999999999999999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHH
Q 013354          293 SGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFK  368 (444)
Q Consensus       293 ~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~  368 (444)
                      ++.+||+|||+++.+.....   .....||+.|||||++.+.. ++.++|||||||+||||+| |+.||......+.+..
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~  272 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC  272 (329)
T ss_dssp             TTEEEECCCC----------------CCCCGGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred             CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            99999999999987644332   23456999999999998766 9999999999999999999 9999998877777776


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          369 IGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       369 ~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +..... +..|..+++++.+||.+||+.||++|||+.||+++
T Consensus       273 i~~g~~-~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          273 ITQGRE-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHTCC-CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHcCCC-CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            665554 46788999999999999999999999999998864


No 13 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.4e-56  Score=437.83  Aligned_cols=252  Identities=27%  Similarity=0.378  Sum_probs=218.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ..+++++.+.||+|+||+||+|++.     .+++.||||+++..    ......+.|.+|+.+|++++|||||+++|++.
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~----~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK----AEGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-----CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc----cChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            3457899999999999999999863     46789999988632    22234467999999999999999999999999


Q ss_pred             cCCEEEEEEeccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC
Q 013354          228 LDDKLYIYLEYVSGGSIYKILQDY----------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD  291 (444)
Q Consensus       228 ~~~~~~lv~e~~~ggsL~~~l~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  291 (444)
                      .++.++||||||++|+|.++|...                ..+++..++.++.||+.||+|||+++||||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999999999999753                3489999999999999999999999999999999999999


Q ss_pred             CCCcEEEEeccccccccCCC---CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhH
Q 013354          292 PSGRVKLADFGMAKHITGQS---CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMF  367 (444)
Q Consensus       292 ~~~~vkL~DFGla~~~~~~~---~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~  367 (444)
                      .++.+||+|||+++.+....   ......||+.|||||++.+.. |+.++|||||||+||||+| |+.||......+...
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE  258 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999998764432   223456999999999998776 9999999999999999998 899999887777777


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          368 KIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       368 ~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .+...... ..|..++.++.+||.+||+.||++|||+.||+++
T Consensus       259 ~i~~~~~~-~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          259 MIRNRQVL-PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCC-CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            77665554 5788999999999999999999999999999875


No 14 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=4.4e-56  Score=433.27  Aligned_cols=249  Identities=30%  Similarity=0.461  Sum_probs=207.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..+++++.+.||+|+||+||+|+++   ..||||+++..   ....+..+.|.+|+.+|++++|||||++++++.. +.+
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~---~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~  106 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVV---DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL  106 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCS---SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEec---CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence            4568899999999999999999764   35999988643   2345567889999999999999999999998764 568


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      +||||||++|+|.++|... ..+++..+..++.||+.||+|||+++||||||||+||||+.++.+||+|||+|+......
T Consensus       107 ~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred             EEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence            9999999999999999764 569999999999999999999999999999999999999999999999999998764322


Q ss_pred             ---CcccccCCCcccCcccccCc--CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHH-hcCCCC---CCCCCCCC
Q 013354          312 ---CPLSIKGSPYWMAPEVIKNS--NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFK-IGNSKE---LPAIPDHL  382 (444)
Q Consensus       312 ---~~~~~~gt~~y~APE~~~~~--~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~-~~~~~~---~~~~~~~~  382 (444)
                         .....+||+.|||||++...  ..|+.++|||||||+||||++|+.||...+....+.. +.....   .+.++..+
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  266 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC  266 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence               23446799999999998643  2389999999999999999999999988766554433 333322   23566789


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCHHHHH
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTAAWLL  408 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~~elL  408 (444)
                      ++++++||.+||+.||++|||+.||+
T Consensus       267 ~~~l~~li~~cl~~dP~~RPs~~ei~  292 (307)
T 3omv_A          267 PKAMKRLVADCVKKVKEERPLFPQIL  292 (307)
T ss_dssp             CHHHHHHHHHHTCSSSTTSCCHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            99999999999999999999999764


No 15 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.9e-55  Score=464.60  Aligned_cols=261  Identities=29%  Similarity=0.413  Sum_probs=223.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc-cccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD-AKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~-~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ..++|++.++||+|+||.||+|+++.+|+.||||++.+.... ...........+++.+++.++|||||+++++|.+.+.
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            346899999999999999999999999999999999743211 1223333444556778888999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      +|+|||||.||+|.++|.+.+.+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+....
T Consensus       267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~  346 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK  346 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999998775443


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh---hhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP---AMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                       ..+.+||+.|||||++..+..|+.++|||||||+||||++|++||.......   ....+...  ...+|..+++++++
T Consensus       347 -~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--~~~~p~~~S~~a~d  423 (689)
T 3v5w_A          347 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPELRS  423 (689)
T ss_dssp             -CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--CCCCCTTSCHHHHH
T ss_pred             -CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC--CCCCCccCCHHHHH
Confidence             4567899999999999766569999999999999999999999997543221   22222222  23578889999999


Q ss_pred             HHHHHhhhCCCCCcC-----HHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPT-----AAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt-----~~elL~hp~~~~~  416 (444)
                      ||.+||++||++|++     ++||++||||++.
T Consensus       424 LI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            999999999999998     7999999999964


No 16 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.5e-55  Score=438.52  Aligned_cols=253  Identities=26%  Similarity=0.379  Sum_probs=208.4

Q ss_pred             CCCeeeeeeecccCceEEEEEEEc---CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcC
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNS---ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLD  229 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~---~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~  229 (444)
                      .++|++.+.||+|+||+||+|+++   .+++.||+|.+...    .   ...++.+|+++|+.+ +||||+++++++..+
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----S---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----S---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----c---CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            357999999999999999999875   45789999987531    1   124577899999998 699999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC-CcEEEEecccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS-GRVKLADFGMAKHIT  308 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~vkL~DFGla~~~~  308 (444)
                      +.+|+|||||+|++|.++++   .+++..++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+...
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             CEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence            99999999999999999984   59999999999999999999999999999999999999876 799999999997543


Q ss_pred             CCC-----------------------------CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCC
Q 013354          309 GQS-----------------------------CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQ  359 (444)
Q Consensus       309 ~~~-----------------------------~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  359 (444)
                      ...                             .....+||+.|+|||++.+...|+.++||||+||++|||++|+.||..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            321                             112356999999999998776689999999999999999999999965


Q ss_pred             CCCh-hhhHHhcC----------------------------------------------------CCCCCCCCCCCCHHH
Q 013354          360 YEGV-PAMFKIGN----------------------------------------------------SKELPAIPDHLSDEG  386 (444)
Q Consensus       360 ~~~~-~~~~~~~~----------------------------------------------------~~~~~~~~~~~s~~l  386 (444)
                      .... ..+..+..                                                    ..........+++++
T Consensus       250 ~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a  329 (361)
T 4f9c_A          250 ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA  329 (361)
T ss_dssp             CSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHH
T ss_pred             CCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHH
Confidence            4322 22111100                                                    000001234579999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +|||++||++||++|+|++|+|+||||++.
T Consensus       330 ~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          330 YDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999999999999985


No 17 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=4.5e-55  Score=461.69  Aligned_cols=257  Identities=26%  Similarity=0.429  Sum_probs=229.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+|+.||+|++..     ......+.+.+|+.+|+.++|||||++++++.+++.+|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~-----~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  230 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT-----PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV  230 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEec-----cchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            3589999999999999999999999999999999864     22334567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC--CcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS--GRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~vkL~DFGla~~~~~~  310 (444)
                      ||||||+||+|.++|.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.+  +.+||+|||+++.+...
T Consensus       231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            99999999999999964 4579999999999999999999999999999999999999754  78999999999998777


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l~~  388 (444)
                      ......+||+.|||||++.+.. |+.++|||||||+||||++|+.||...+....+..+......  ......+++++++
T Consensus       311 ~~~~~~~GT~~y~APEv~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d  389 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD  389 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred             CceeeeEECccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence            6666778999999999998765 899999999999999999999999987777777766554322  2334678999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||++||++||++|||+.|+|+||||+..
T Consensus       390 li~~~L~~dp~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          390 FIRKLLLADPNTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence            9999999999999999999999999864


No 18 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2.3e-55  Score=436.77  Aligned_cols=253  Identities=26%  Similarity=0.414  Sum_probs=215.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCC-----CcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC-CCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSES-----GEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH-PNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~-----g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-pnIv~l~~~~  226 (444)
                      +.++|++++.||+|+||+||+|++..+     ++.||||.++.    .......+.+.+|+.+|.+++| ||||+++++|
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~----~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcc----ccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            456899999999999999999998654     36799998863    2334456789999999999976 8999999998


Q ss_pred             Ec-CCEEEEEEeccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceE
Q 013354          227 TL-DDKLYIYLEYVSGGSIYKILQDY----------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANIL  289 (444)
Q Consensus       227 ~~-~~~~~lv~e~~~ggsL~~~l~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  289 (444)
                      .. ++.+++|||||++|+|.++|++.                ..+++..++.++.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            66 45789999999999999999763                23889999999999999999999999999999999999


Q ss_pred             ECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhh
Q 013354          290 VDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPA  365 (444)
Q Consensus       290 l~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~  365 (444)
                      ++.++.+||+|||+|+.+.....   .....||+.|||||++.+.. |+.++|||||||+||||+| |+.||........
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~  296 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  296 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999987654432   23456899999999998766 9999999999999999998 9999988765554


Q ss_pred             hHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          366 MFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       366 ~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +.........+..|..+++++++||.+||+.||++|||+.||++|
T Consensus       297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            443333333456788999999999999999999999999999987


No 19 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=2.2e-52  Score=412.63  Aligned_cols=259  Identities=27%  Similarity=0.464  Sum_probs=232.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|++..+|+.||||++...   .......+.+.+|+.+++.++||||+++++++...+.+|
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT---QLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG---GSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhh---cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            45799999999999999999999999999999998742   234456678899999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      +||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred             EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999887666656


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKC  393 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~  393 (444)
                      ...+||+.|+|||++.+....+.++|||||||++|||++|+.||...+.......+.....  .+|..++.++.+||++|
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~  248 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDCENLLKRF  248 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHH
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHH
Confidence            6678999999999998777456899999999999999999999988766555555554432  56778999999999999


Q ss_pred             hhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          394 LQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       394 L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      |+.||++|||++|+++||||+...
T Consensus       249 L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          249 LVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CCCChhHCcCHHHHhcCHhhcCCC
Confidence            999999999999999999998643


No 20 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-51  Score=410.68  Aligned_cols=259  Identities=27%  Similarity=0.428  Sum_probs=221.0

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.+.||+|+||+||+|++..+|+.||||++.....    ....+.+.+|+.+++.++||||+++++++...+.
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~   82 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL----GSDLPRIKTEIEALKNLRHQHICQLYHVLETANK   82 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc----chHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence            345789999999999999999999999999999999874321    2234578899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      +++||||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        83 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  162 (347)
T 3zgw_A           83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK  162 (347)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999988654432


Q ss_pred             --CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHH
Q 013354          312 --CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDF  389 (444)
Q Consensus       312 --~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~L  389 (444)
                        .....+||+.|+|||++.+...++.++|||||||++|||++|..||...+.......+.....  .++..++.++.+|
T Consensus       163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~l  240 (347)
T 3zgw_A          163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY--DVPKWLSPSSILL  240 (347)
T ss_dssp             ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTCCHHHHHH
T ss_pred             CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHH
Confidence              233456999999999998776458999999999999999999999988666666666554432  5678899999999


Q ss_pred             HHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          390 VRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      |.+||+.||++|||++|+++||||...
T Consensus       241 i~~~L~~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          241 LQQMLQVDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred             HHHHcccCHhHCcCHHHHhcCcchhcC
Confidence            999999999999999999999999764


No 21 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.7e-51  Score=406.26  Aligned_cols=258  Identities=30%  Similarity=0.460  Sum_probs=226.1

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||+||+|+++.+++.||+|+++...  .......+.+.+|+.+++.++||||+++++++...+.+|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHH--hhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            357999999999999999999999999999999986421  111223467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-CCC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-QSC  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-~~~  312 (444)
                      +||||+.|++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... ...
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence            9999999999999999888999999999999999999999999999999999999999999999999999986433 333


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      ....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.......+....  ..++..++.++++||.+
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~  238 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAG  238 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHH
T ss_pred             ccccccChhhCChhhhcCCC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHH
Confidence            45667999999999997665 8999999999999999999999998766555555544332  35678899999999999


Q ss_pred             HhhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          393 CLQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       393 ~L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      ||++||++||     +++|+++||||++.
T Consensus       239 lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            9999999999     99999999999864


No 22 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.7e-52  Score=405.61  Aligned_cols=247  Identities=27%  Similarity=0.356  Sum_probs=195.4

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC----
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD----  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~----  230 (444)
                      .+|.+.+.||+|+||+||+|++  +|+.||||++...      .........|+..+.+++|||||++++++..++    
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~------~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc------chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCce
Confidence            4688999999999999999987  4899999988531      112223345777778899999999999987653    


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCCCceEECCCCcEEEEecc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK--------NTVHRDIKGANILVDPSGRVKLADFG  302 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~vkL~DFG  302 (444)
                      .+|||||||++|+|.++|++ ..+++..+.+++.|++.||+|||++        +||||||||+||||+.++.+||+|||
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG  153 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence            68999999999999999987 5799999999999999999999987        99999999999999999999999999


Q ss_pred             ccccccCCCCc-----ccccCCCcccCcccccCcC-----CCChhhhHHHHHHHHHHHHcCCCCCCCCCC----------
Q 013354          303 MAKHITGQSCP-----LSIKGSPYWMAPEVIKNSN-----GCNLAVDIWSLGCTVIEMATTKPPWSQYEG----------  362 (444)
Q Consensus       303 la~~~~~~~~~-----~~~~gt~~y~APE~~~~~~-----~~s~~sDvwSlGvil~elltG~~Pf~~~~~----------  362 (444)
                      +++........     ...+||+.|||||++.+..     .++.++|||||||+||||++|..||.....          
T Consensus       154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~  233 (303)
T 3hmm_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred             CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence            99876554322     2356999999999986542     267899999999999999999876643221          


Q ss_pred             ----hhhhH-HhcCCCCCCCCCCC-----CCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          363 ----VPAMF-KIGNSKELPAIPDH-----LSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       363 ----~~~~~-~~~~~~~~~~~~~~-----~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                          ...+. .+......|.+|..     ++..+.+||.+||+.||++|||+.||++.
T Consensus       234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                11122 22223333445443     23578999999999999999999998863


No 23 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.2e-51  Score=411.35  Aligned_cols=259  Identities=28%  Similarity=0.464  Sum_probs=223.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ..++|++.+.||+|+||+||+|+++.+++.||||+++...  .......+.+.+|..++..+ +||||+++++++...+.
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~--~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH--hcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            3468999999999999999999999999999999987421  12233446778899999988 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-C
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-Q  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-~  310 (444)
                      +|+||||+.|++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence            999999999999999999988999999999999999999999999999999999999999999999999999986432 2


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+.....  .++..++.++++||
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li  255 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--VYPTWLHEDATGIL  255 (353)
T ss_dssp             -------CCGGGCCHHHHHHHH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHH
T ss_pred             ccccccCCCcCeEChhhcCCCC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHH
Confidence            3344567999999999997665 89999999999999999999999988776666666655433  56788999999999


Q ss_pred             HHHhhhCCCCCcCH------HHHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRPTA------AWLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~------~elL~hp~~~~~  416 (444)
                      ++||++||++||++      +|+++||||++.
T Consensus       256 ~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            99999999999999      899999999864


No 24 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=4.4e-51  Score=408.48  Aligned_cols=263  Identities=27%  Similarity=0.414  Sum_probs=228.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc-cHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK-SKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~-~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ..++|++.+.||+|+||.||+|+++.+|+.||+|++........ .....+.+.+|+.++++++||||+++++++.....
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            34679999999999999999999999999999999975432211 11124578899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC----cEEEEeccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG----RVKLADFGMAKHI  307 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----~vkL~DFGla~~~  307 (444)
                      +++||||+.|++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++...
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~  169 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence            999999999999999998888899999999999999999999999999999999999998776    7999999999987


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHH
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDE  385 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~  385 (444)
                      ..........||+.|+|||++.+.. ++.++|||||||++|+|++|..||........+..+......  +.....++.+
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  248 (361)
T 2yab_A          170 EDGVEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL  248 (361)
T ss_dssp             CTTCCCCCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHH
T ss_pred             CCCCccccCCCCccEECchHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHH
Confidence            6665556677999999999997655 899999999999999999999999887666666555543321  1223578999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +++||++||.+||++|||+.|+|+||||++.
T Consensus       249 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          249 AKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            9999999999999999999999999999864


No 25 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.2e-50  Score=409.73  Aligned_cols=258  Identities=27%  Similarity=0.459  Sum_probs=221.1

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~  232 (444)
                      ..+|++.++||+|+||+||+|+++.+++.||+|+++...  .......+.+.+|..++.++ +||||+++++++...+.+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~--~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~  128 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL--VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL  128 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGG--TC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh--ccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence            468999999999999999999999999999999987432  22334445678899999887 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc-cCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI-TGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~-~~~~  311 (444)
                      |+||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.. ....
T Consensus       129 ~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence            999999999999999998889999999999999999999999999999999999999999999999999999863 3344


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC--------hh-hhHHhcCCCCCCCCCCCC
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG--------VP-AMFKIGNSKELPAIPDHL  382 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~--------~~-~~~~~~~~~~~~~~~~~~  382 (444)
                      .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....        .. ....+...  ...+|..+
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~~-~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~  285 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL  285 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--CCCCCTTS
T ss_pred             ccccccCCcccCCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--ccCCCCcC
Confidence            455678999999999997765 89999999999999999999999964221        11 12222222  23577889


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCH------HHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTA------AWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~------~elL~hp~~~~~  416 (444)
                      +.++++||++||++||++||++      +||++||||++.
T Consensus       286 s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          286 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            9999999999999999999984      799999999864


No 26 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.5e-51  Score=406.28  Aligned_cols=258  Identities=28%  Similarity=0.471  Sum_probs=225.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|++.+.||+|+||.||+|++..+++.||+|++....  .......+.+.+|+.+++.++||||+++++++...+.+++
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL--LKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH--ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            57999999999999999999999999999999986311  1111223578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCcc
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCPL  314 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~  314 (444)
                      ||||+ +|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~  165 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK  165 (336)
T ss_dssp             EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred             EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence            99999 78999999888899999999999999999999999999999999999999999999999999998876666566


Q ss_pred             cccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHh
Q 013354          315 SIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCL  394 (444)
Q Consensus       315 ~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L  394 (444)
                      ..+||+.|+|||++.+....+.++|||||||++|+|++|+.||...........+...  ...++..++.++++||++||
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L  243 (336)
T 3h4j_B          166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDFLSPGAQSLIRRMI  243 (336)
T ss_dssp             CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSS--CCCCCTTSCHHHHHHHHTTS
T ss_pred             cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCCCcccCCHHHHHHHHHHc
Confidence            6779999999999987664478999999999999999999999775544444333322  23567889999999999999


Q ss_pred             hhCCCCCcCHHHHHhCCCCCCCC
Q 013354          395 QRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       395 ~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      +.||++|||++|+++||||+...
T Consensus       244 ~~dP~~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          244 VADPMQRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             CCChhHCcCHHHHHhChhhccCC
Confidence            99999999999999999998653


No 27 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=6.7e-51  Score=396.01  Aligned_cols=258  Identities=33%  Similarity=0.616  Sum_probs=224.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||+||+|++..+++.||+|++.....     ...+.+.+|+.+++.++||||+++++++...+.++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW   93 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-----cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEE
Confidence            4589999999999999999999999999999999874321     12356788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC-
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC-  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~-  312 (444)
                      +||||+.+++|.+++.+ ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus        94 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (297)
T 3fxz_A           94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (297)
T ss_dssp             EEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             EEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence            99999999999999987 4799999999999999999999999999999999999999999999999999987654432 


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC-CCCCCCCCCCCCHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN-SKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~s~~l~~Li~  391 (444)
                      .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.......+.. .......+..++.++++||.
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  251 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred             cCCccCCcCccChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence            34456999999999997766 89999999999999999999999987665544443322 22223456789999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      +||+.||++|||++|+|+||||+...+
T Consensus       252 ~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          252 RCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhhChhhcccCc
Confidence            999999999999999999999987644


No 28 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1e-50  Score=398.91  Aligned_cols=256  Identities=27%  Similarity=0.497  Sum_probs=226.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+|+.||+|+++....  ......+.+.+|+.+++.++||||+++++++...+.+|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV--VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence            3579999999999999999999999999999999864211  11123467788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      +||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  .
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--~  160 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--T  160 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--B
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc--c
Confidence            99999999999999998888999999999999999999999999999999999999999999999999999876432  3


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKC  393 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~  393 (444)
                      ...+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+....  ..++..++.++++||++|
T Consensus       161 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~l  237 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNEDVKDLLSRL  237 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHH
T ss_pred             ccccCCccccCHhHhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHH
Confidence            4567999999999997665 8999999999999999999999998766666665555443  256788999999999999


Q ss_pred             hhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          394 LQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       394 L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      |+.||++||     +++++++||||++.
T Consensus       238 L~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          238 ITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             TCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             hccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            999999999     99999999999864


No 29 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=4.4e-50  Score=398.86  Aligned_cols=258  Identities=27%  Similarity=0.454  Sum_probs=223.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~  232 (444)
                      ..+|++.+.||+|+||.||+|+++.+++.||+|+++..  ........+.+.+|+.++.++ +||||+++++++..++.+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE--LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGG--GSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhH--HhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            35799999999999999999999999999999998742  223455667888999999988 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc-CCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT-GQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~-~~~  311 (444)
                      |+||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... ...
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence            9999999999999999988899999999999999999999999999999999999999999999999999998643 233


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCC--------Chh-hhHHhcCCCCCCCCCCCC
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYE--------GVP-AMFKIGNSKELPAIPDHL  382 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~--------~~~-~~~~~~~~~~~~~~~~~~  382 (444)
                      .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||....        ... ....+...  ...++..+
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~  242 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL  242 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred             cccccCCCccccCccccCCCC-CChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence            345567999999999997665 8999999999999999999999996421        111 12222222  23567889


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCH------HHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTA------AWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~------~elL~hp~~~~~  416 (444)
                      +.++++||++||++||++||++      +|+++||||++.
T Consensus       243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999999999999999995      899999999864


No 30 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.8e-50  Score=389.82  Aligned_cols=259  Identities=29%  Similarity=0.501  Sum_probs=214.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||+||+|+++.+++.||+|++....   ......+.+.+|+.++++++||||+++++++..++.+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   78 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD---DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC---SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC---CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEE
Confidence            47999999999999999999999999999999987532   233345678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          235 YLEYVSGGSIYKILQ-DYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||+.+ +|.+.+. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus        79 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           79 VFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence            9999976 5555554 45679999999999999999999999999999999999999999999999999998765332 2


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC-hhhhHHhcC--------------------
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG-VPAMFKIGN--------------------  371 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-~~~~~~~~~--------------------  371 (444)
                      .....||+.|+|||++.+...++.++|||||||++|||++|..||..... ...+..+..                    
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence            33456899999999997766689999999999999999998877543332 222222211                    


Q ss_pred             -------CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          372 -------SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       372 -------~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                             ..........++.++++||++||+.||++|||++|+|+||||++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence                   0011122346899999999999999999999999999999999753


No 31 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=8.1e-51  Score=404.09  Aligned_cols=259  Identities=27%  Similarity=0.460  Sum_probs=226.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ..++|++.+.||+|+||.||+|+++.+++.||||+++....  ......+.+..|..++..+ +||||+++++++...+.
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh--hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            34689999999999999999999999999999999874211  1112345677888988877 99999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-C
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-Q  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-~  310 (444)
                      +|+||||+.|++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... .
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence            999999999999999999888999999999999999999999999999999999999999999999999999986432 3


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+....  +.++..++.++++||
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li  249 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLL  249 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred             CcccCCCCCcccCChhhhcCCC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--CCCCcccCHHHHHHH
Confidence            3345667999999999997765 8999999999999999999999998776666666555433  356788999999999


Q ss_pred             HHHhhhCCCCCcCHH-HHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRPTAA-WLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~~-elL~hp~~~~~  416 (444)
                      ++||+.||++||++. +|++||||++.
T Consensus       250 ~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          250 VKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHhcCCHhHcCCChHHHHcCccccCC
Confidence            999999999999998 99999999864


No 32 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.3e-50  Score=404.99  Aligned_cols=260  Identities=28%  Similarity=0.444  Sum_probs=218.5

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHH-HHccCCCCeeeEeeeEEcCC
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIAL-LSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~-l~~l~hpnIv~l~~~~~~~~  230 (444)
                      ...++|++.+.||+|+||.||+|+++.+++.||+|+++...  .......+.+.+|..+ ++.++||||+++++++...+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~--~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKA--ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGG--BC-------------CCBCCCCCTTBCCEEEEEECSS
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHH--hhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC
Confidence            34568999999999999999999999999999999987532  1223334566677776 57789999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc-C
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT-G  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~-~  309 (444)
                      .+|+||||+.|++|.+++.+...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++... .
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            999999999999999999988889999999999999999999999999999999999999999999999999998643 3


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDF  389 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~L  389 (444)
                      .......+||+.|+|||++.+.. ++.++|||||||++|||++|..||...+....+..+....  ..++..++.++++|
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~l  269 (373)
T 2r5t_A          193 NSTTSTFCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKPNITNSARHL  269 (373)
T ss_dssp             CCCCCSBSCCCCCCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--CCCCSSSCHHHHHH
T ss_pred             CCccccccCCccccCHHHhCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCHHHHHH
Confidence            33445677999999999997665 8999999999999999999999998766666665555433  24677899999999


Q ss_pred             HHHHhhhCCCCCcCH----HHHHhCCCCCCC
Q 013354          390 VRKCLQRNPLHRPTA----AWLLEHPFVGNA  416 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~----~elL~hp~~~~~  416 (444)
                      |++||++||++||++    +++++||||++.
T Consensus       270 i~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            999999999999986    699999999853


No 33 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.9e-50  Score=403.97  Aligned_cols=257  Identities=28%  Similarity=0.416  Sum_probs=225.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++....   ......+.+.+|+.+++.++||||+++++++..++..|+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            47999999999999999999999999999999987422   234456788999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---cEEEEeccccccccCCC
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---RVKLADFGMAKHITGQS  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~vkL~DFGla~~~~~~~  311 (444)
                      ||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++.......
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999999999999998878899999999999999999999999999999999999997654   59999999998876655


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC--CCCCCCCHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP--AIPDHLSDEGKDF  389 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~s~~l~~L  389 (444)
                      ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+.......  .....++.++++|
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  264 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL  264 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHH
T ss_pred             ccccCCCCccccCHHHHccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence            555677999999999997665 8999999999999999999999998766655555554433221  1224689999999


Q ss_pred             HHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          390 VRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      |.+||+.||++|||+.|+|+||||.+
T Consensus       265 i~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          265 IDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHcCCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999999975


No 34 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2.7e-50  Score=401.53  Aligned_cols=259  Identities=25%  Similarity=0.396  Sum_probs=225.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ...+|++.+.||+|+||.||+|+++.+++.||+|+++....  ......+.+.+|..++..+ +||||+++++++...+.
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   95 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV--IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   95 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence            34689999999999999999999999999999999874211  1122345678899999988 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-C
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-Q  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-~  310 (444)
                      +|+||||+.|++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... .
T Consensus        96 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence            999999999999999999888999999999999999999999999999999999999999999999999999986432 3


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+....  ..++..++.++++||
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li  252 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAIC  252 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred             cccccccCCccccChhhhcCCC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHH
Confidence            3345667999999999997665 8999999999999999999999998766666666655433  356788999999999


Q ss_pred             HHHhhhCCCCCcC-----HHHHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRPT-----AAWLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rpt-----~~elL~hp~~~~~  416 (444)
                      ++||++||++||+     +++|++||||++.
T Consensus       253 ~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          253 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            9999999999994     6999999999853


No 35 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.7e-50  Score=401.12  Aligned_cols=256  Identities=31%  Similarity=0.506  Sum_probs=227.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+|+.||+|++....  .......+.+.+|+.+++.++||||+++++++...+.+|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH--hccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            468999999999999999999999999999999986421  111223467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      +||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....  .
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--~  195 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--T  195 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--B
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC--c
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999876543  3


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKC  393 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~  393 (444)
                      ...+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+....  ..++..++.++++||++|
T Consensus       196 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~l  272 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNL  272 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCccccCHHHhcCCC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHH
Confidence            4567999999999997665 8999999999999999999999998766666666655443  356788999999999999


Q ss_pred             hhhCCCCCcC-----HHHHHhCCCCCCC
Q 013354          394 LQRNPLHRPT-----AAWLLEHPFVGNA  416 (444)
Q Consensus       394 L~~dP~~Rpt-----~~elL~hp~~~~~  416 (444)
                      |+.||++||+     ++||++||||++.
T Consensus       273 L~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          273 LQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             SCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             hhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            9999999998     9999999999863


No 36 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-50  Score=399.08  Aligned_cols=256  Identities=27%  Similarity=0.381  Sum_probs=224.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++...      ......+.+|+.+++.++||||+++++++...+.++
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   77 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK------GTDQVLVKKEISILNIARHRNILHLHESFESMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC------THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC------cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEE
Confidence            46899999999999999999999999999999988631      223456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC--CCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP--SGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            9999999999999997653 6999999999999999999999999999999999999987  789999999999887665


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC--CCCCCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP--AIPDHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~s~~l~~  388 (444)
                      .......||+.|+|||++.+.. ++.++|||||||++|+|++|..||...........+.......  .....++.++++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  236 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD  236 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred             CccccccCChhhcCcHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence            5555567999999999997665 8999999999999999999999998766655555554433221  112468999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||.+||..||++|||+.|+|+||||++.
T Consensus       237 li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          237 FVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            9999999999999999999999999865


No 37 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=4e-50  Score=395.75  Aligned_cols=263  Identities=25%  Similarity=0.418  Sum_probs=226.4

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc-cHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK-SKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~-~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++........ .....+.+.+|+.+++.++||||+++++++.....+
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3579999999999999999999999999999999875432211 111246788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC----cEEEEecccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG----RVKLADFGMAKHIT  308 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----~vkL~DFGla~~~~  308 (444)
                      ++||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++....
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            99999999999999998878899999999999999999999999999999999999998877    79999999998876


Q ss_pred             CCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHH
Q 013354          309 GQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEG  386 (444)
Q Consensus       309 ~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l  386 (444)
                      .........||+.|+|||++.... ++.++|||||||++|+|++|..||........+..+......  ......++.++
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (326)
T 2y0a_A          170 FGNEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA  248 (326)
T ss_dssp             TTSCCCCCCSCTTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred             CCCccccccCCcCcCCceeecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHH
Confidence            555555667999999999997665 899999999999999999999999876655555444332211  12235689999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ++||++||+.||++|||+.|+|+||||++..
T Consensus       249 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            9999999999999999999999999998753


No 38 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2.6e-50  Score=396.70  Aligned_cols=260  Identities=26%  Similarity=0.438  Sum_probs=220.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||+||+|+++.+++.||+|++....    .....+.+.+|+.+++.++||||+++++++..++..+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   81 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY   81 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc----ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            468999999999999999999999999999999986422    2223467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC--
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS--  311 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~--  311 (444)
                      +||||+.+++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+....  
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            999999999999999887789999999999999999999999999999999999999999999999999998653322  


Q ss_pred             -CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh-hHHhcCCCCCCCCCCCCCHHHHHH
Q 013354          312 -CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA-MFKIGNSKELPAIPDHLSDEGKDF  389 (444)
Q Consensus       312 -~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~s~~l~~L  389 (444)
                       ......||+.|+|||++.+...++.++|||||||++|||++|+.||........ ................++.++.+|
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence             223456999999999998776458899999999999999999999987554422 222222222223335689999999


Q ss_pred             HHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          390 VRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      |.+||+.||++|||++|+++||||++..
T Consensus       242 i~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          242 LHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHHccCChhhCcCHHHHhhChhhcccc
Confidence            9999999999999999999999998653


No 39 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.1e-49  Score=408.73  Aligned_cols=257  Identities=28%  Similarity=0.421  Sum_probs=223.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....   ......+.+.+|+.+++.++||||+++++++..++..|+
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK---LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS---CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc---CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            57999999999999999999999999999999987432   233445778999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC---CCCcEEEEeccccccccCCC
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD---PSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~vkL~DFGla~~~~~~~  311 (444)
                      ||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.......
T Consensus        88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            999999999999999988999999999999999999999999999999999999998   46789999999998765543


Q ss_pred             C-cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHHHH
Q 013354          312 C-PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEGKD  388 (444)
Q Consensus       312 ~-~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l~~  388 (444)
                      . .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+......  ......+++++++
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  246 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD  246 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred             ceeecccCCcccCCHHHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence            2 34567999999999997665 899999999999999999999999887666666655544332  1223468999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ||.+||+.||++|||+.|+|+||||++
T Consensus       247 li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          247 LINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHHHcCCChhHCCCHHHHhcCccccC
Confidence            999999999999999999999999975


No 40 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2e-49  Score=381.55  Aligned_cols=264  Identities=27%  Similarity=0.409  Sum_probs=229.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|.++.+++.||+|++...   .......+.+.+|+.++++++|+||+++++++...+..
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH   80 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG---GCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecc---cCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEE
Confidence            356899999999999999999999999999999998742   23445567888999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc---EEEEeccccccccC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR---VKLADFGMAKHITG  309 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---vkL~DFGla~~~~~  309 (444)
                      ++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.   +||+|||++.....
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999999999999988888999999999999999999999999999999999999976655   99999999987766


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEGK  387 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l~  387 (444)
                      ........||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...........+......  ......+++++.
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T 3kk8_A          161 SEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK  239 (284)
T ss_dssp             SCBCCCSCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             CccccCCCCCcCCcCchhhcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHH
Confidence            65555677999999999997665 899999999999999999999999876655555544433221  222357899999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCCc
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPLE  420 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~~  420 (444)
                      +||.+||+.||++|||++|+|+||||++.....
T Consensus       240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          240 SLIDSMLTVNPKKRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred             HHHHHHcccChhhCCCHHHHhcCccccCChhHH
Confidence            999999999999999999999999998764443


No 41 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=3.7e-50  Score=404.65  Aligned_cols=261  Identities=24%  Similarity=0.453  Sum_probs=226.7

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|+++.+++.||+|++....  .......+.+.+|+.+|+.++||||+++++++...+.
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~--~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~   89 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK--CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED   89 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh--cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            34568999999999999999999999999999999986421  1112234678899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      +|+||||+.|++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET  169 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999999877666


Q ss_pred             CcccccCCCcccCcccccCc--CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh---hhHHhcCCCCCCCCCCCCCHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNS--NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP---AMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~--~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ......||+.|+|||++...  ..++.++|||||||++|||++|+.||.......   ....+..  ....++..++.++
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~p~~~s~~~  247 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET--TVVTYPSAWSQEM  247 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH--CCCCCCTTSCHHH
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh--cccCCCCcCCHHH
Confidence            66677899999999998642  348899999999999999999999997543322   2222222  2235678899999


Q ss_pred             HHHHHHHhhhCCCCCcC-HHHHHhCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPT-AAWLLEHPFVGNA  416 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt-~~elL~hp~~~~~  416 (444)
                      .+||++||+.||++||+ ++++++||||++.
T Consensus       248 ~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            99999999999999998 8999999999864


No 42 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=4.6e-50  Score=401.02  Aligned_cols=258  Identities=29%  Similarity=0.403  Sum_probs=208.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||+||+|+++.+++.||+|++.....      ..+.+.+|+.+++.++||||+++++++...+.+
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   91 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA------IDENVQREIINHRSLRHPNIVRFKEVILTPTHL   91 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT------SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc------ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEE
Confidence            45689999999999999999999999999999999864211      124577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc--EEEEeccccccccCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR--VKLADFGMAKHITGQ  310 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--vkL~DFGla~~~~~~  310 (444)
                      ++||||+.+++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            999999999999999998889999999999999999999999999999999999999987765  999999999865544


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh----hHHhcCCCCCCCCCCCCCHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA----MFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      .......||+.|+|||++.+....+.++|||||||++|+|++|+.||........    ...+............++.++
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  251 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC  251 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHH
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHH
Confidence            4445567999999999998776334559999999999999999999986544322    222322222222234689999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++||.+||+.||++|||+.|+++||||...
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          252 CHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            999999999999999999999999999654


No 43 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=5.1e-50  Score=392.34  Aligned_cols=263  Identities=29%  Similarity=0.470  Sum_probs=217.0

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      +...++|++.+.||+|+||+||+|++. +++.||+|++....   ......+.+.+|+.++++++||||+++++++..++
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   92 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA---EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER   92 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccc---ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC
Confidence            345678999999999999999999986 48999999986422   22334567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .+++||||+. ++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           93 CLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             CEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             EEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            9999999997 48888887643 599999999999999999999999999999999999999999999999999987653


Q ss_pred             CC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC---CCC-----------
Q 013354          310 QS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN---SKE-----------  374 (444)
Q Consensus       310 ~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~---~~~-----------  374 (444)
                      .. ......||+.|+|||++.+...++.++|||||||++|||++|+.||........+..+..   ...           
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  251 (311)
T 3niz_A          172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP  251 (311)
T ss_dssp             CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred             CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence            32 233456899999999997766689999999999999999999999987665544433211   000           


Q ss_pred             --------------CCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          375 --------------LPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       375 --------------~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                                    ...+...+++++.+||++||+.||++|||++|+|+||||++..+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence                          00112457899999999999999999999999999999998654


No 44 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=8e-50  Score=397.43  Aligned_cols=258  Identities=28%  Similarity=0.426  Sum_probs=207.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|+++.+++.||||+++..       ...+.+.+|+.++++++||||+++++++...+.+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  123 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-------VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEI  123 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeE
Confidence            346799999999999999999999999999999998632       1235677899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcEEEEeccccccccC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRVKLADFGMAKHITG  309 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~vkL~DFGla~~~~~  309 (444)
                      ++||||+.+++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++....
T Consensus       124 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             EEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            999999999999999988888999999999999999999999999999999999999975   78999999999987765


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh-hhHHhcCCCC--CCCCCCCCCHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP-AMFKIGNSKE--LPAIPDHLSDEG  386 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~~~~--~~~~~~~~s~~l  386 (444)
                      ........||+.|+|||++.+.. ++.++|||||||++|||++|..||....... .+..+.....  .......++.++
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  282 (349)
T 2w4o_A          204 QVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA  282 (349)
T ss_dssp             ---------CGGGSCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             ccccccccCCCCccCHHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHH
Confidence            54445567999999999997665 8999999999999999999999998766554 3333333222  123346789999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ++||++||+.||++|||+.|+|+||||.+...
T Consensus       283 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence            99999999999999999999999999987544


No 45 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2e-50  Score=387.29  Aligned_cols=258  Identities=28%  Similarity=0.477  Sum_probs=203.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||+|++....  ....+..+.+.+|+.+++.++||||+++++++...+..+
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKV--LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII   89 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhh--cchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEE
Confidence            357999999999999999999999999999999986422  122334567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      +||||+ +++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        90 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  168 (275)
T 2eue_A           90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             EEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred             EEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcccc
Confidence            999999 7899999988888999999999999999999999999999999999999999999999999999877665555


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKC  393 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~  393 (444)
                      ....||+.|+|||++.+....+.++|||||||++|||++|+.||...........+....  ..++..++.++.+||++|
T Consensus       169 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~  246 (275)
T 2eue_A          169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             ------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHHHHHH
T ss_pred             cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHHHHH
Confidence            556799999999999876645789999999999999999999998766555555444333  356788999999999999


Q ss_pred             hhhCCCCCcCHHHHHhCCCCCCC
Q 013354          394 LQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       394 L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      |+.||++|||++|+|+||||+..
T Consensus       247 l~~dP~~Rps~~e~l~h~~f~~~  269 (275)
T 2eue_A          247 LIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             SCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             hhcCHhHCCCHHHHhhCCeeccc
Confidence            99999999999999999999874


No 46 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=4.4e-50  Score=391.34  Aligned_cols=263  Identities=30%  Similarity=0.466  Sum_probs=213.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc---CCCCeeeEeeeEEcC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL---RHPNIVRYYGSETLD  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l---~hpnIv~l~~~~~~~  229 (444)
                      ..++|++.+.||+|+||+||+|++..+++.||+|++...............+.+|+.+++.+   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            35689999999999999999999999999999999875432222211223455666666655   599999999998875


Q ss_pred             C-----EEEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecc
Q 013354          230 D-----KLYIYLEYVSGGSIYKILQDYGQ--LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFG  302 (444)
Q Consensus       230 ~-----~~~lv~e~~~ggsL~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFG  302 (444)
                      .     .+++||||+. ++|.+++.....  +++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  165 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG  165 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence            5     5899999996 699999987654  9999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC------C-
Q 013354          303 MAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE------L-  375 (444)
Q Consensus       303 la~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~------~-  375 (444)
                      +++............||+.|+|||++.+.. ++.++|||||||++|||++|+.||........+..+.....      . 
T Consensus       166 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (308)
T 3g33_A          166 LARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  244 (308)
T ss_dssp             CTTTSTTCCCSGGGGCCCSSCCHHHHHTSC-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSC
T ss_pred             cccccCCCcccCCccccccccCchHHcCCC-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            998876665556677999999999998766 89999999999999999999999987665554443321100      0 


Q ss_pred             ------------------CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          376 ------------------PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       376 ------------------~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                        ..+...+++++.+||.+||+.||++|||+.|+|+||||++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                              011245789999999999999999999999999999998754


No 47 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.1e-49  Score=393.93  Aligned_cols=259  Identities=27%  Similarity=0.496  Sum_probs=228.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||++++..+++.||+|++...  ........+.+.+|+.+++.++|+||+++++++...+.+
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  116 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS--LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV  116 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG--GCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechh--hhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence            456899999999999999999999999999999998642  223455667889999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-  311 (444)
                      ++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       117 ~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             EEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999998764332 


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~  391 (444)
                      ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+....  ..++..++.++.+||+
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~  273 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIPKHINPVAASLIQ  273 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHHHH
T ss_pred             cccccCCCccccCHHHhccCC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC--CCCCccCCHHHHHHHH
Confidence            233456999999999997665 8999999999999999999999998766555544444332  2467789999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +||+.||++|||++|+|+||||...
T Consensus       274 ~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          274 KMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999864


No 48 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.8e-49  Score=400.01  Aligned_cols=263  Identities=27%  Similarity=0.439  Sum_probs=220.4

Q ss_pred             CCCCCeeeeeeeccc--CceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC
Q 013354          152 SPGSRWKKGRLLGRG--TFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G--~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~  229 (444)
                      ..+.+|++.+.||+|  +||+||+|+++.+++.||||++...   .......+.+.+|+.+++.++||||+++++++..+
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   98 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLE---ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD   98 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGG---GSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccc---ccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC
Confidence            456789999999999  9999999999999999999999752   23455677889999999999999999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      +.+++||||+.+++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+...
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999999999875  56999999999999999999999999999999999999999999999999988654


Q ss_pred             cCC--------CCcccccCCCcccCcccccCc-CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC----
Q 013354          308 TGQ--------SCPLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE----  374 (444)
Q Consensus       308 ~~~--------~~~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~----  374 (444)
                      ...        .......||+.|+|||++.+. ..++.++|||||||++|||++|+.||........+..+.....    
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            221        112234689999999999763 3489999999999999999999999987665544433221110    


Q ss_pred             ----------------------------------------CCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          375 ----------------------------------------LPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       375 ----------------------------------------~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                                                              ....+..++.++++||++||+.||++|||+.|+|+||||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence                                                    0123456889999999999999999999999999999998


Q ss_pred             CCC
Q 013354          415 NAA  417 (444)
Q Consensus       415 ~~~  417 (444)
                      +..
T Consensus       339 ~~~  341 (389)
T 3gni_B          339 QIK  341 (389)
T ss_dssp             GC-
T ss_pred             HHh
Confidence            753


No 49 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=3.4e-50  Score=396.47  Aligned_cols=261  Identities=26%  Similarity=0.470  Sum_probs=211.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++..   .......+.+.+|+.++++++||||+++++++..++.+
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE---HEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCC---C--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccc---ccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence            346899999999999999999999999999999998642   22333456778999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC-----CCCcEEEEeccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD-----PSGRVKLADFGMAKHI  307 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-----~~~~vkL~DFGla~~~  307 (444)
                      ++||||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++     .++.+||+|||+++..
T Consensus       109 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          109 HLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             EEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             EEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            99999997 59999999988899999999999999999999999999999999999994     4556999999999876


Q ss_pred             cCCC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC-----------
Q 013354          308 TGQS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL-----------  375 (444)
Q Consensus       308 ~~~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-----------  375 (444)
                      .... ......||+.|+|||++.+...++.++|||||||++|||++|+.||........+..+......           
T Consensus       188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence            5332 2234558999999999987666899999999999999999999999876655444433211000           


Q ss_pred             --------CC---------CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          376 --------PA---------IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       376 --------~~---------~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                              +.         ++..++.++++||.+||+.||++|||++|+|+||||++..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                    00         0112789999999999999999999999999999998753


No 50 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.3e-49  Score=392.33  Aligned_cols=260  Identities=31%  Similarity=0.484  Sum_probs=215.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc---CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS---ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~---~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~  229 (444)
                      ..++|++.+.||+|+||.||+|++.   .+++.||+|+++..... ........+.+|+.+++.++||||+++++++..+
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   93 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG   93 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence            3568999999999999999999985   68999999998742211 1223445678899999999999999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +.+|+||||+.+++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~  173 (327)
T 3a62_A           94 GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH  173 (327)
T ss_dssp             SCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred             CEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999976433


Q ss_pred             C-CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          310 Q-SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       310 ~-~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                      . .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+....  ..++..++.++++
T Consensus       174 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~  250 (327)
T 3a62_A          174 DGTVTHTFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLPPYLTQEARD  250 (327)
T ss_dssp             -----CTTSSCCTTSCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCCCTTSCHHHHH
T ss_pred             CCccccccCCCcCccCHhhCcCCC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHH
Confidence            2 2234466999999999997665 8999999999999999999999998766655555554433  2567789999999


Q ss_pred             HHHHHhhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      ||.+||+.||++||     +++|+++||||++.
T Consensus       251 li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            99999999999999     89999999999864


No 51 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=5.8e-50  Score=411.29  Aligned_cols=259  Identities=29%  Similarity=0.460  Sum_probs=217.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|+++.+++.||||++...  ..........+.+|+.+++.++||||+++++++...+.+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHH--HHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhh--hhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence            346899999999999999999999999999999998632  112334456778899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCCCceEECCCCcEEEEeccccccccC-C
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHA-KNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-Q  310 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-~  310 (444)
                      ++||||+.+++|.+++.+...+++..++.++.||+.||+|||+ +||+||||||+||||+.++.+||+|||+++.... .
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            9999999999999999988899999999999999999999998 9999999999999999999999999999986433 2


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.......+....  ..++..+++++++||
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li  380 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLL  380 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHH
T ss_pred             cccccccCCccccCHhhcCCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHH
Confidence            3344567999999999997766 8999999999999999999999998766655555554333  246778999999999


Q ss_pred             HHHhhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      .+||++||++||     +++|+++||||++.
T Consensus       381 ~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          381 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999999     99999999999975


No 52 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=6.4e-50  Score=413.57  Aligned_cols=260  Identities=30%  Similarity=0.474  Sum_probs=230.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|.+++.||+|+||.||+|++..+|+.||||++....  .......+.+.+|+.+++.++||||+++++++...+.+
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~--~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~   91 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK--IRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI   91 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH--HHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh--ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3468999999999999999999999999999999986321  11112346788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      ++||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~  171 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  171 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence            99999999999999998888899999999999999999999999999999999999999999999999999988766555


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      ....+||+.|+|||++.+....+.++|||||||++|||++|+.||...........+....  ...+..++.++++||++
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~Li~~  249 (476)
T 2y94_A          172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQYLNPSVISLLKH  249 (476)
T ss_dssp             BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC--CCCCTTCCHHHHHHHHH
T ss_pred             ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC--cCCCccCCHHHHHHHHH
Confidence            5667799999999999876645789999999999999999999998876666666665443  24677899999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||+.||++|||++|+++||||+..
T Consensus       250 ~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          250 MLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HcCCCchhCcCHHHHHhCHHhhhc
Confidence            999999999999999999999864


No 53 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.4e-50  Score=388.90  Aligned_cols=260  Identities=28%  Similarity=0.482  Sum_probs=213.8

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeeccccc---------------------ccHHHHHHHHHHHHHHH
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDA---------------------KSKESAQQLGQEIALLS  212 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~---------------------~~~~~~~~~~~Ei~~l~  212 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||||++.......                     ......+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            358999999999999999999999999999999987432111                     01123467889999999


Q ss_pred             ccCCCCeeeEeeeEEc--CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE
Q 013354          213 RLRHPNIVRYYGSETL--DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV  290 (444)
Q Consensus       213 ~l~hpnIv~l~~~~~~--~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  290 (444)
                      +++||||+++++++..  .+.+++||||+.+++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~  170 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV  170 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence            9999999999999886  6789999999999999886543 579999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEeccccccccCCCC-cccccCCCcccCcccccCcCC--CChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH
Q 013354          291 DPSGRVKLADFGMAKHITGQSC-PLSIKGSPYWMAPEVIKNSNG--CNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF  367 (444)
Q Consensus       291 ~~~~~vkL~DFGla~~~~~~~~-~~~~~gt~~y~APE~~~~~~~--~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~  367 (444)
                      +.++.+||+|||++........ .....||+.|+|||++.+...  ++.++|||||||++|||++|+.||..........
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  250 (298)
T 2zv2_A          171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS  250 (298)
T ss_dssp             CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH
Confidence            9999999999999987654332 234569999999999976542  4789999999999999999999998765444444


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          368 KIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       368 ~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                      .+............+++++++||.+||+.||++|||+.|+++||||+
T Consensus       251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            44333222223457899999999999999999999999999999985


No 54 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-49  Score=399.43  Aligned_cols=258  Identities=22%  Similarity=0.405  Sum_probs=224.5

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++..     ........+.+|+.+|+.++||||+++++++.....++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  124 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT-----PYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV  124 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----CSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecc-----cchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEE
Confidence            3579999999999999999999999999999999864     22334457889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC--CCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP--SGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....
T Consensus       125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            9999999999999997654 6999999999999999999999999999999999999974  467999999999987665


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC--CCCCCCCCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK--ELPAIPDHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~s~~l~~  388 (444)
                      .......||+.|+|||++.+.. ++.++|||||||++|||++|..||...+....+..+....  ..+.....++.++++
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  283 (387)
T 1kob_A          205 EIVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD  283 (387)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred             cceeeeccCCCccCchhccCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence            5555567999999999997665 8999999999999999999999998766555555444322  122344578999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ||++||+.||++|||+.|+|+||||++..
T Consensus       284 li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          284 FIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            99999999999999999999999998753


No 55 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=4.3e-50  Score=399.59  Aligned_cols=261  Identities=28%  Similarity=0.427  Sum_probs=217.5

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||+||+|+++.+++.||||++.............+.+.+|+.+++.++||||+++++++..++.+|
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35799999999999999999999999999999998642211111112467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc---EEEEecccccc
Q 013354          234 IYLEYVSGGSIYKILQDY----GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR---VKLADFGMAKH  306 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---vkL~DFGla~~  306 (444)
                      +||||+++++|.+++.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||++..
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence            999999999999888653    24899999999999999999999999999999999999976654   99999999987


Q ss_pred             ccCCCC-cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCC
Q 013354          307 ITGQSC-PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLS  383 (444)
Q Consensus       307 ~~~~~~-~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s  383 (444)
                      ...... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... ......+......  +.....++
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s  260 (351)
T 3c0i_A          183 LGESGLVAGGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS  260 (351)
T ss_dssp             CCTTSCBCCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             ecCCCeeecCCcCCcCccCHHHHcCCC-CCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCC
Confidence            755433 33456999999999997665 8999999999999999999999997632 2233333322221  11125689


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .++++||++||+.||++|||+.|+|+||||++.
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            999999999999999999999999999999863


No 56 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.3e-49  Score=384.65  Aligned_cols=257  Identities=29%  Similarity=0.497  Sum_probs=212.3

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||+||+|++ .+++.||+|++......   ....+.+.+|+.+++.++||||+++++++...+.+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEE
Confidence            4799999999999999999998 57899999998753322   2223567789999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          235 YLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||+.+ +|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  156 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (288)
T ss_dssp             EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence            9999965 999999864 569999999999999999999999999999999999999999999999999998764332 2


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC----------------C---
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS----------------K---  373 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~----------------~---  373 (444)
                      .....+|+.|+|||++.+...++.++|||||||++|||++|+.||........+..+...                .   
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence            234468999999999976666899999999999999999999999876544433322110                0   


Q ss_pred             --------CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          374 --------ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       374 --------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                              ....+...++.++++||++||+.||++|||++|+|+||||++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                    0011234689999999999999999999999999999999863


No 57 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=3.3e-50  Score=408.50  Aligned_cols=261  Identities=26%  Similarity=0.442  Sum_probs=222.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||+||+|+++.+++.||+|+++....  ......+.+.+|+.+++.++||||+++++++.+++.+
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~  144 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  144 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            34689999999999999999999999999999999864111  0111123577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      |+||||+.||+|.+++.+ ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus       145 ~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          145 YMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             EEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred             EEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence            999999999999999986 5799999999999999999999999999999999999999999999999999987655432


Q ss_pred             --cccccCCCcccCcccccCcCC---CChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCC--CCCCCHH
Q 013354          313 --PLSIKGSPYWMAPEVIKNSNG---CNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAI--PDHLSDE  385 (444)
Q Consensus       313 --~~~~~gt~~y~APE~~~~~~~---~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~s~~  385 (444)
                        ....+||+.|+|||++.+...   ++.++|||||||+||||++|+.||...+....+..+........+  ...++.+
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~  303 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE  303 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHH
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHH
Confidence              335679999999999975432   678999999999999999999999877666666665543211122  3468999


Q ss_pred             HHHHHHHHhhhCCCC--CcCHHHHHhCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLH--RPTAAWLLEHPFVGNA  416 (444)
Q Consensus       386 l~~Li~~~L~~dP~~--Rpt~~elL~hp~~~~~  416 (444)
                      +++||++||+.+|++  |++++||++||||++.
T Consensus       304 ~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            999999999999998  9999999999999864


No 58 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.3e-49  Score=399.45  Aligned_cols=254  Identities=24%  Similarity=0.421  Sum_probs=215.6

Q ss_pred             eeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEEEE
Q 013354          157 WKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYIYL  236 (444)
Q Consensus       157 ~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~  236 (444)
                      |...+.||+|+||.||+|++..+|+.||+|+++.     ......+.+.+|+.++++++||||+++++++...+.+++||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT-----RGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEEC-----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcc-----cccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            3446789999999999999999999999999874     22344567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE--CCCCcEEEEeccccccccCCCCc
Q 013354          237 EYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV--DPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       237 e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll--~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      ||+++++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||+  +.++.+||+|||+++.+......
T Consensus       166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~  245 (373)
T 2x4f_A          166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL  245 (373)
T ss_dssp             ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred             eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence            999999999988764 469999999999999999999999999999999999999  56788999999999987666555


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEGKDFVR  391 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l~~Li~  391 (444)
                      ....||+.|+|||++.... ++.++|||||||++|||++|+.||...+....+..+......  ......+++++++||.
T Consensus       246 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             ccccCCCcEeChhhccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence            5667999999999997655 899999999999999999999999887666555555433221  1223568999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +||+.||++|||+.|+|+||||++.
T Consensus       325 ~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             HHcCCChhhCCCHHHHhcCcCcCCC
Confidence            9999999999999999999999875


No 59 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.2e-49  Score=380.59  Aligned_cols=257  Identities=27%  Similarity=0.455  Sum_probs=212.9

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|.+.+.||+|+||.||+|.++.+++.+|+|++.....    ....+.+.+|+.++++++||||+++++++...+..+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   96 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS----QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY   96 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc----chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence            3579999999999999999999999999999999875322    222467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEecccccc
Q 013354          234 IYLEYVSGGSIYKILQDY----GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKH  306 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~  306 (444)
                      +||||+.+++|.+++...    ..+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A           97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence            999999999999998653    579999999999999999999999999999999999999   4567899999999987


Q ss_pred             ccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC-CCCCCCCCCCHH
Q 013354          307 ITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK-ELPAIPDHLSDE  385 (444)
Q Consensus       307 ~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~s~~  385 (444)
                      ...........||+.|+|||++.. . ++.++|||||||++|||++|+.||................ ........++++
T Consensus       177 ~~~~~~~~~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (285)
T 3is5_A          177 FKSDEHSTNAAGTALYMAPEVFKR-D-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQ  254 (285)
T ss_dssp             ----------CTTGGGCCHHHHTT-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHH
T ss_pred             cCCcccCcCcccccCcCChHHhcc-C-CCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHH
Confidence            766555556679999999999853 3 7999999999999999999999998766544443332222 222223457999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +.+||++||+.||++|||+.|+|+||||+++
T Consensus       255 ~~~li~~~L~~dP~~Rps~~e~l~hp~f~~a  285 (285)
T 3is5_A          255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQA  285 (285)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCHHhhcC
Confidence            9999999999999999999999999999864


No 60 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=3.9e-50  Score=411.06  Aligned_cols=262  Identities=24%  Similarity=0.396  Sum_probs=223.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.++||+|+||+||+|+++.+++.||+|++.....  ......+.+.+|+.++..++||||+++++++.+++.+
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  149 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL  149 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH--HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh--hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence            34689999999999999999999999999999999863111  1111123478899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      |+||||+.+|+|.+++.+ ...+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+++......
T Consensus       150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence            999999999999999987 4679999999999999999999999999999999999999999999999999998765443


Q ss_pred             C--cccccCCCcccCcccccC----cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC---CCCCCCCCCC
Q 013354          312 C--PLSIKGSPYWMAPEVIKN----SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS---KELPAIPDHL  382 (444)
Q Consensus       312 ~--~~~~~gt~~y~APE~~~~----~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~  382 (444)
                      .  ....+||+.|+|||++..    ...++.++|||||||+||||++|+.||...+....+..+...   ...+.....+
T Consensus       230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  309 (437)
T 4aw2_A          230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV  309 (437)
T ss_dssp             CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCS
T ss_pred             CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccC
Confidence            2  233579999999999862    334899999999999999999999999887766666555432   2334444568


Q ss_pred             CHHHHHHHHHHhhhCCCC--CcCHHHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLH--RPTAAWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~--Rpt~~elL~hp~~~~~  416 (444)
                      ++++++||++||..+|++  |++++|+++||||++.
T Consensus       310 s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          310 SENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            999999999999888888  9999999999999864


No 61 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=8.6e-49  Score=382.31  Aligned_cols=262  Identities=26%  Similarity=0.469  Sum_probs=217.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||+||+|++..+++.||+|++...   .......+.+.+|+.++++++||||+++++++...+..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES---EDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL   79 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC---CC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc---ccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence            5799999999999999999999999999999988642   2344556778899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-Cc
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-CP  313 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~~  313 (444)
                      ||||+.+++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence            99999999999999887889999999999999999999999999999999999999999999999999998765332 22


Q ss_pred             ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC--------------------CC
Q 013354          314 LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN--------------------SK  373 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--------------------~~  373 (444)
                      ....||+.|+|||++.+...++.++|||||||++|+|++|+.||...........+..                    ..
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV  239 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence            3456899999999998756689999999999999999999999987654443322211                    01


Q ss_pred             CCCCC---------CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          374 ELPAI---------PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       374 ~~~~~---------~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      ..+..         ...++.++.+||++||+.||++|||++|+|+||||++....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence            11110         14578999999999999999999999999999999987544


No 62 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.2e-49  Score=390.63  Aligned_cols=259  Identities=31%  Similarity=0.497  Sum_probs=204.5

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|+++.....    ...+.+.+|+.++++++||||+++++++..++.++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISLMKELKHENIVRLYDVIHTENKLT   79 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTT----CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc----ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEE
Confidence            35799999999999999999999999999999998753321    12346778999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          234 IYLEYVSGGSIYKILQDY------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      +||||+. ++|.+++...      ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9999997 6999999764      35899999999999999999999999999999999999999999999999999876


Q ss_pred             cCCC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC--------------
Q 013354          308 TGQS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS--------------  372 (444)
Q Consensus       308 ~~~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~--------------  372 (444)
                      .... ......||+.|+|||++.+...++.++|||||||++|||++|+.||........+..+...              
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence            4332 2334568999999999976655899999999999999999999999876554433322110              


Q ss_pred             --CC----------------CCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          373 --KE----------------LPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       373 --~~----------------~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                        ..                .+..+..++.++++||.+||+.||++|||++|+|+||||++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence              00                0112235789999999999999999999999999999998753


No 63 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.7e-49  Score=400.83  Aligned_cols=252  Identities=28%  Similarity=0.441  Sum_probs=203.5

Q ss_pred             CCeeee-eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHH-HccCCCCeeeEeeeEEc----
Q 013354          155 SRWKKG-RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALL-SRLRHPNIVRYYGSETL----  228 (444)
Q Consensus       155 ~~~~~~-~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l-~~l~hpnIv~l~~~~~~----  228 (444)
                      .+|.+. ++||+|+||+||+|+++.+++.||||++..      .    ..+.+|+.++ +..+||||+++++++..    
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------C----PKARREVELHWRASQCPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------S----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------c----hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence            467776 789999999999999999999999998852      1    2456778876 44589999999998875    


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcEEEEeccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRVKLADFGM  303 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~vkL~DFGl  303 (444)
                      ...+|+||||+.+++|.+++.+..  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            567899999999999999998753  4999999999999999999999999999999999999987   78899999999


Q ss_pred             cccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh----hhHHhcCCCCC--CC
Q 013354          304 AKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP----AMFKIGNSKEL--PA  377 (444)
Q Consensus       304 a~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~----~~~~~~~~~~~--~~  377 (444)
                      ++...........+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......    ....+......  ..
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~  289 (400)
T 1nxk_A          211 AKETTSHNSLTTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP  289 (400)
T ss_dssp             CEECC-----------CTTCCGGGSCCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred             ccccCCCCccccCCCCCCccCHhhcCCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence            98776555555677999999999997655 8999999999999999999999997654322    22222222211  12


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          378 IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       378 ~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ....++.++++||++||+.||++|||+.|+|+||||.+..
T Consensus       290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            2256899999999999999999999999999999997643


No 64 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=5.9e-49  Score=386.01  Aligned_cols=263  Identities=27%  Similarity=0.414  Sum_probs=227.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc-cHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK-SKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~-~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++........ .....+.+.+|+.++++++||||+++++++...+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            3579999999999999999999999999999999875432211 111246788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC----cEEEEecccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG----RVKLADFGMAKHIT  308 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----~vkL~DFGla~~~~  308 (444)
                      ++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence            99999999999999999888899999999999999999999999999999999999999887    79999999998876


Q ss_pred             CCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHH
Q 013354          309 GQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEG  386 (444)
Q Consensus       309 ~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l  386 (444)
                      .........||+.|+|||++.+.. ++.++|||||||++|+|++|..||...........+......  +.+...++.++
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA  249 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             ccccccccCCCCCccCcccccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHH
Confidence            655555667999999999997665 899999999999999999999999876655555555433221  12235789999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ++||++||+.||++|||+.|+|+||||++..
T Consensus       250 ~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          250 KDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             HHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            9999999999999999999999999998754


No 65 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1e-49  Score=405.06  Aligned_cols=261  Identities=25%  Similarity=0.436  Sum_probs=221.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|+++...  .......+.+.+|..++..++|+||+++++++.+++.+
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~--~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  136 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD--MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL  136 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence            3468999999999999999999999999999999986311  11122234578899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      |+||||+.|++|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~  216 (412)
T 2vd5_A          137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG  216 (412)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence            99999999999999998764 79999999999999999999999999999999999999999999999999998765543


Q ss_pred             C--cccccCCCcccCcccccC------cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC---CCCCCCCC
Q 013354          312 C--PLSIKGSPYWMAPEVIKN------SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS---KELPAIPD  380 (444)
Q Consensus       312 ~--~~~~~gt~~y~APE~~~~------~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~  380 (444)
                      .  ....+||+.|+|||++..      ...++.++|||||||++|||++|+.||...+....+..+...   ...+.++.
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  296 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE  296 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcccc
Confidence            3  234679999999999873      234899999999999999999999999887666655555432   23344557


Q ss_pred             CCCHHHHHHHHHHhhhCCCCC---cCHHHHHhCCCCCCC
Q 013354          381 HLSDEGKDFVRKCLQRNPLHR---PTAAWLLEHPFVGNA  416 (444)
Q Consensus       381 ~~s~~l~~Li~~~L~~dP~~R---pt~~elL~hp~~~~~  416 (444)
                      .++.++++||++||. +|++|   ++++|+++||||++.
T Consensus       297 ~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            899999999999999 99998   599999999999864


No 66 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.1e-49  Score=407.04  Aligned_cols=260  Identities=26%  Similarity=0.416  Sum_probs=201.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc----
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL----  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----  228 (444)
                      ..++|++.+.||+|+||+||+|+++.+++.||||++..   ........+++.+|+.+|+.++|+||+++++++..    
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR---VFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECS---TTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEech---hhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc
Confidence            34689999999999999999999999999999998863   22345556789999999999999999999999843    


Q ss_pred             -CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 -DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 -~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                       ...+|+||||+ +++|.+++.....+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+++..
T Consensus       128 ~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          128 KFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             TCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             cCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence             35799999998 6799999998888999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCC----------------------------CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-------
Q 013354          308 TGQS----------------------------CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-------  352 (444)
Q Consensus       308 ~~~~----------------------------~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-------  352 (444)
                      ....                            .....+||+.|+|||++.....++.++|||||||+||||++       
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~  286 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA  286 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence            4221                            12335689999999987655569999999999999999999       


Q ss_pred             ----CCCCCCCCCCh--------------------hhhHHhc-----------------------------CCCCCCCCC
Q 013354          353 ----TKPPWSQYEGV--------------------PAMFKIG-----------------------------NSKELPAIP  379 (444)
Q Consensus       353 ----G~~Pf~~~~~~--------------------~~~~~~~-----------------------------~~~~~~~~~  379 (444)
                          |+++|.+....                    ..+..+.                             ....+....
T Consensus       287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (458)
T 3rp9_A          287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF  366 (458)
T ss_dssp             SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred             ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence                66666543210                    0000000                             000111223


Q ss_pred             CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          380 DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       380 ~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ..++.++.+||++||..||++|||++|+|+||||++.
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence            4569999999999999999999999999999999975


No 67 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.7e-49  Score=380.91  Aligned_cols=256  Identities=26%  Similarity=0.453  Sum_probs=224.4

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|.++.++..+|+|++.....     ...+.+.+|+.++++++||||+++++++...+..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY   82 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence            3579999999999999999999999999999998864221     12457889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            999999999999999988889999999999999999999999999999999999999   77889999999999887766


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCC--CCCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAI--PDHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~s~~l~~  388 (444)
                      .......||+.|+|||++.+.  ++.++||||||+++|||++|+.||...........+.........  ...+++++.+
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (277)
T 3f3z_A          163 KMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES  240 (277)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTC--BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred             cchhccCCCCCccChHHhccc--CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHH
Confidence            666667799999999998643  789999999999999999999999887666655555443322111  1268999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||.+||+.||++|||+.|+|+||||++.
T Consensus       241 li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          241 LIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999999999999864


No 68 
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=3.9e-49  Score=377.94  Aligned_cols=261  Identities=30%  Similarity=0.463  Sum_probs=218.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|++....  .......+.+.+|+.+++.++||||+++++++...+..
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK--IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF   86 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc--ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence            3468999999999999999999999999999999986321  11122346788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      ++||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999987765544


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      .....+++.|+|||++.+....+.++||||||+++|+|++|+.||...........+....  ..++..++.++.+||.+
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~  244 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FYIPEYLNRSVATLLMH  244 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHH
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc--ccCchhcCHHHHHHHHH
Confidence            4556689999999999876644789999999999999999999998765555444444332  24677889999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ||+.||++|||+.|+++||||++..
T Consensus       245 ~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          245 MLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HccCChhhCCCHHHHHhChhhccCc
Confidence            9999999999999999999998753


No 69 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=2.1e-49  Score=380.86  Aligned_cols=260  Identities=31%  Similarity=0.573  Sum_probs=223.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++....  .........+.+|+.++++++||||+++++++...+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   84 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   84 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc--cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence            3468999999999999999999999999999999986311  11222346788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      ++||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... 
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-  163 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-  163 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence            9999999999999999988899999999999999999999999999999999999999999999999999986554332 


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      .....|++.|+|||++.+.. ++.++||||||+++|+|++|..||...........+....  ..++..++.++++||.+
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~  240 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--FTFPDFVTEGARDLISR  240 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHHHHH
T ss_pred             ccccCCCCCccCHhHhccCC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC--CCCCCcCCHHHHHHHHH
Confidence            33456899999999997665 8899999999999999999999998766555555544332  25677899999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ||+.||++|||+.|+|+||||++...
T Consensus       241 ~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          241 LLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HhccChhhCCCHHHHhhCccccCCcc
Confidence            99999999999999999999987543


No 70 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2e-48  Score=376.14  Aligned_cols=259  Identities=29%  Similarity=0.514  Sum_probs=222.3

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc---
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL---  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~---  228 (444)
                      ..+..|++.+.||+|+||.||+|.+..++..||+|++...   .......+.+.+|+.+++.++||||+++++++..   
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR---KLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG---GSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecch---hhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence            3456799999999999999999999999999999988742   2345556788999999999999999999998765   


Q ss_pred             -CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEEC-CCCcEEEEecccc
Q 013354          229 -DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVD-PSGRVKLADFGMA  304 (444)
Q Consensus       229 -~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~-~~~~vkL~DFGla  304 (444)
                       ...+++||||+.+++|.+++.+...+++..++.++.||+.||.|||+++  |+||||||+|||++ .++.+||+|||++
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          100 GKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             CCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence             4568999999999999999998889999999999999999999999999  99999999999997 7889999999999


Q ss_pred             ccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhh-HHhcCCCCCCCCCCCCC
Q 013354          305 KHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAM-FKIGNSKELPAIPDHLS  383 (444)
Q Consensus       305 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~s  383 (444)
                      ...... ......||+.|+|||++.+ . ++.++|||||||++|+|++|+.||......... ..+........++...+
T Consensus       180 ~~~~~~-~~~~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (290)
T 1t4h_A          180 TLKRAS-FAKAVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             GGCCTT-SBEESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred             cccccc-ccccccCCcCcCCHHHHhc-c-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCC
Confidence            765433 2334569999999999863 3 799999999999999999999999876555444 33444434445566788


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +++.+||.+||+.||++|||+.|+|+||||++.
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            999999999999999999999999999999874


No 71 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=8.7e-49  Score=383.41  Aligned_cols=252  Identities=27%  Similarity=0.403  Sum_probs=209.0

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~  233 (444)
                      .+|++.+.||+|+||+||+|+++.+++.||||++....   ...........|+..+..+ +|+||+++++++..++.++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF---RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC---CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc---cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            57999999999999999999999999999999875321   2223334444555555544 9999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          234 IYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      +||||+ +++|.+++...+ .+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........
T Consensus       134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~  212 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA  212 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence            999999 779998887654 599999999999999999999999999999999999999999999999999987766555


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      .....||+.|+|||++.+ . ++.++|||||||++|||++|..||..   ......+......+.++..++.++.+||.+
T Consensus       213 ~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~el~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  287 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQG-S-YGTAADVFSLGLTILEVACNMELPHG---GEGWQQLRQGYLPPEFTAGLSSELRSVLVM  287 (311)
T ss_dssp             --CCCCCGGGCCGGGGGT-C-CSTHHHHHHHHHHHHHHHHTCCCCSS---HHHHHHHTTTCCCHHHHTTSCHHHHHHHHH
T ss_pred             CcccCCCccccCHhHhcC-C-CCchhhHHHHHHHHHHHHhCCCCCCC---ccHHHHHhccCCCcccccCCCHHHHHHHHH
Confidence            555679999999999875 3 89999999999999999999766643   233334433333344567789999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ||+.||++|||++|+|+||||++
T Consensus       288 ~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          288 MLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999976


No 72 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.5e-49  Score=396.58  Aligned_cols=257  Identities=27%  Similarity=0.469  Sum_probs=208.1

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEEcCC--E
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSETLDD--K  231 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~--~  231 (444)
                      .+|++.+.||+|+||.||+|+++.+++.||||++..   ........+.+.+|+.+++.+. |+||+++++++..++  .
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD---AFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC-----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecc---cccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            579999999999999999999999999999998853   2234555678889999999997 999999999987544  7


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC-
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ-  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~-  310 (444)
                      +|+||||+. ++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+... 
T Consensus        86 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            899999996 699999987 57999999999999999999999999999999999999999999999999999865321 


Q ss_pred             ---------------------CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHh
Q 013354          311 ---------------------SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKI  369 (444)
Q Consensus       311 ---------------------~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~  369 (444)
                                           ......+||+.|+|||++.+...++.++|||||||++|||++|++||...+....+..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  243 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI  243 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                                 11233569999999999987566899999999999999999999999876655544433


Q ss_pred             cCCCCCC---------------------------------------------CCCCCCCHHHHHHHHHHhhhCCCCCcCH
Q 013354          370 GNSKELP---------------------------------------------AIPDHLSDEGKDFVRKCLQRNPLHRPTA  404 (444)
Q Consensus       370 ~~~~~~~---------------------------------------------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~  404 (444)
                      ......|                                             ..+..+++++.+||++||+.||++|||+
T Consensus       244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~  323 (388)
T 3oz6_A          244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA  323 (388)
T ss_dssp             HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence            2110000                                             0123679999999999999999999999


Q ss_pred             HHHHhCCCCCCC
Q 013354          405 AWLLEHPFVGNA  416 (444)
Q Consensus       405 ~elL~hp~~~~~  416 (444)
                      +|+|+||||+..
T Consensus       324 ~e~l~Hp~~~~~  335 (388)
T 3oz6_A          324 NDALKHPFVSIF  335 (388)
T ss_dssp             HHHTTSTTTTTT
T ss_pred             HHHhCCHHHHHh
Confidence            999999999864


No 73 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.7e-48  Score=377.40  Aligned_cols=259  Identities=27%  Similarity=0.496  Sum_probs=227.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|++...  ........+.+.+|+.+++.++|+||+++++++..++..
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   90 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS--LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV   90 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG--GCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechh--hccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence            456899999999999999999999999999999998642  223445667889999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-  311 (444)
                      ++||||+.+++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus        91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999998764322 


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~  391 (444)
                      ......||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...........+....  ..++..++.++.+||.
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~  247 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIPKHINPVAASLIQ  247 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--CCCCTTSCHHHHHHHH
T ss_pred             ccccccCCCCcCCcchhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc--CCCccccCHHHHHHHH
Confidence            233456899999999997655 8999999999999999999999998766555555444332  3567789999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +||+.||++|||++|+++||||.+.
T Consensus       248 ~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          248 KMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHcccChhhCcCHHHHhhChheecC
Confidence            9999999999999999999999764


No 74 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.9e-49  Score=392.61  Aligned_cols=256  Identities=25%  Similarity=0.360  Sum_probs=221.4

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc---cHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK---SKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~---~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      .+|++.+.||+|+||.||+|+++.+++.||||++........   .....+.+.+|+.++++++||||+++++++...+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            479999999999999999999999999999999875322111   11123456779999999999999999999999999


Q ss_pred             EEEEEeccCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          232 LYIYLEYVSGG-SIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       232 ~~lv~e~~~gg-sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      +++||||+.++ +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence            99999998666 99999998888999999999999999999999999999999999999999999999999999987766


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      .......||+.|+|||++.+...++.++|||||||++|||++|+.||.....      ..  ......+..++.++.+||
T Consensus       184 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~--~~~~~~~~~~~~~l~~li  255 (335)
T 3dls_A          184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TV--EAAIHPPYLVSKELMSLV  255 (335)
T ss_dssp             CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GT--TTCCCCSSCCCHHHHHHH
T ss_pred             CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HH--hhccCCCcccCHHHHHHH
Confidence            6556677999999999998776458999999999999999999999965221      11  111234567899999999


Q ss_pred             HHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          391 RKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      .+||+.||++|||++++++||||++...
T Consensus       256 ~~~L~~dP~~Rps~~ell~hp~~~~~~~  283 (335)
T 3dls_A          256 SGLLQPVPERRTTLEKLVTDPWVTQPVN  283 (335)
T ss_dssp             HHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred             HHHccCChhhCcCHHHHhcCccccCCcc
Confidence            9999999999999999999999987543


No 75 
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.4e-48  Score=376.59  Aligned_cols=265  Identities=26%  Similarity=0.395  Sum_probs=227.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc----cccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD----AKSKESAQQLGQEIALLSRLR-HPNIVRYYGSET  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~----~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~  227 (444)
                      ...+|++.+.||+|+||.||+|+++.+++.||||++......    .......+.+.+|+.+++++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            346899999999999999999999999999999998754321    112344567889999999995 999999999999


Q ss_pred             cCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          228 LDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       228 ~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      .++..++||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence            99999999999999999999998888999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCCcccccCCCcccCccccc-----CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCC--CCC
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIK-----NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPA--IPD  380 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~-----~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~  380 (444)
                      ..........+++.|+|||++.     ....++.++||||||+++|||++|+.||...........+........  ...
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T 1phk_A          175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD  254 (298)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGG
T ss_pred             CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCccccc
Confidence            6655555667999999999985     233478999999999999999999999987665555544443332211  224


Q ss_pred             CCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          381 HLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       381 ~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      .++.++.+||.+||+.||++|||+.|+|+||||++..
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            6899999999999999999999999999999999754


No 76 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.6e-48  Score=390.30  Aligned_cols=261  Identities=26%  Similarity=0.448  Sum_probs=225.3

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc---cccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCC
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD---AKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDD  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~---~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~  230 (444)
                      .+|++.+.||+|+||.||+|+++.+|+.||||++......   ....+..+.+.+|+.+++++ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            4699999999999999999999999999999998754322   12233456788999999999 7999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      ..++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~  253 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG  253 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999887766


Q ss_pred             CCcccccCCCcccCcccccCc-----CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCC--CCCCC
Q 013354          311 SCPLSIKGSPYWMAPEVIKNS-----NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAI--PDHLS  383 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~-----~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~s  383 (444)
                      .......||+.|+|||++.+.     ..++.++|||||||++|||++|+.||...........+.........  ...++
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  333 (365)
T 2y7j_A          254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRS  333 (365)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSC
T ss_pred             cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCC
Confidence            555667799999999998632     23788999999999999999999999876655555444433322111  24688


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      .++.+||.+||+.||++|||++|+|+||||+.
T Consensus       334 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          334 STVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999999999999963


No 77 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=7.9e-49  Score=376.49  Aligned_cols=258  Identities=28%  Similarity=0.542  Sum_probs=199.0

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|++.+.||+|+||.||+|++..+++.||+|++....  .......+.+.+|+.++++++||||+++++++...+..++
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA--MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh--hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            57999999999999999999999999999999986311  1111224678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          235 YLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  168 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK  168 (278)
T ss_dssp             EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc
Confidence            99999999999999875 569999999999999999999999999999999999999999999999999998764322 2


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      .....||+.|+|||++.+.. ++.++||||||+++|||++|+.||...........+....  ...+..++.++++||.+
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~  245 (278)
T 3cok_A          169 HYTLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD--YEMPSFLSIEAKDLIHQ  245 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC--CCCCTTSCHHHHHHHHH
T ss_pred             ceeccCCCCcCCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc--cCCccccCHHHHHHHHH
Confidence            33456899999999997655 7899999999999999999999998755444444333222  24567899999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ||+.||++|||+.++++||||.+..
T Consensus       246 ~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          246 LLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HcccCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999999998753


No 78 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-48  Score=384.11  Aligned_cols=255  Identities=35%  Similarity=0.580  Sum_probs=220.3

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYIY  235 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv  235 (444)
                      .|+..+.||+|+||.||+|+++.+|+.||||++.....     ...+.+.+|+.+++.++|+||+++++++...+..++|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEE
Confidence            48888999999999999999999999999999864221     2235678999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-Ccc
Q 013354          236 LEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-CPL  314 (444)
Q Consensus       236 ~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~~~  314 (444)
                      |||+.+++|.+++.+ ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus       121 ~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  199 (321)
T 2c30_A          121 MEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK  199 (321)
T ss_dssp             ECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence            999999999999875 579999999999999999999999999999999999999999999999999998765432 234


Q ss_pred             cccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC-CCCCCCCCHHHHHHHHHH
Q 013354          315 SIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL-PAIPDHLSDEGKDFVRKC  393 (444)
Q Consensus       315 ~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~s~~l~~Li~~~  393 (444)
                      ...||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+...... ......++.++++||.+|
T Consensus       200 ~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  278 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERM  278 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHH
T ss_pred             cccCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHH
Confidence            556999999999997665 899999999999999999999999876655555444332221 122346899999999999


Q ss_pred             hhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          394 LQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       394 L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      |+.||++|||+.|+++||||....
T Consensus       279 l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          279 LVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             SCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             ccCChhhCcCHHHHhcChhhccCC
Confidence            999999999999999999998653


No 79 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2.5e-48  Score=373.27  Aligned_cols=253  Identities=26%  Similarity=0.417  Sum_probs=214.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~  233 (444)
                      .+|++.+.||+|+||.||+|++..+++.||+|++....   ........+.+|+..+..+ +||||+++++++..++..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---AGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC---TTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc---cccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            57999999999999999999999999999999987422   2223456778899999999 9999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC----------------
Q 013354          234 IYLEYVSGGSIYKILQDY----GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS----------------  293 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----------------  293 (444)
                      +||||+++++|.+++.+.    ..+++..++.++.||+.||.|||++||+||||||+|||++.+                
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999999875    569999999999999999999999999999999999999844                


Q ss_pred             ---CcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhc
Q 013354          294 ---GRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIG  370 (444)
Q Consensus       294 ---~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~  370 (444)
                         ..+||+|||++.......   ...||+.|+|||++.+...++.++|||||||++|||++|.+++....   ....+.
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~  241 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIR  241 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHH
T ss_pred             CCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHH
Confidence               479999999998765433   33489999999999876557789999999999999999998775432   233333


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          371 NSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       371 ~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      . ...+.++..++.++.+||.+||+.||++|||+.|+++||||++..
T Consensus       242 ~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          242 Q-GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             T-TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             c-CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            2 334577888999999999999999999999999999999998753


No 80 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=4.3e-49  Score=386.87  Aligned_cols=254  Identities=25%  Similarity=0.390  Sum_probs=209.2

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC----
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD----  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~----  230 (444)
                      .+|++.+.||+|+||.||+|+++.+++.||||+++...    .....+.+.+|+.++++++||||+++++++.+..    
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   81 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW   81 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS----TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC----chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence            46999999999999999999999999999999987532    2334567899999999999999999999875543    


Q ss_pred             -----------------------------------------------------EEEEEEeccCCCCHHHHHHhcCC---C
Q 013354          231 -----------------------------------------------------KLYIYLEYVSGGSIYKILQDYGQ---L  254 (444)
Q Consensus       231 -----------------------------------------------------~~~lv~e~~~ggsL~~~l~~~~~---l  254 (444)
                                                                           .+++||||+++++|.+++.+...   .
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  161 (332)
T 3qd2_B           82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR  161 (332)
T ss_dssp             HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred             hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence                                                                 38999999999999999987543   5


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-------------CcccccCCCc
Q 013354          255 GESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-------------CPLSIKGSPY  321 (444)
Q Consensus       255 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-------------~~~~~~gt~~  321 (444)
                      .+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......             ......||+.
T Consensus       162 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            666789999999999999999999999999999999999999999999998765542             2233569999


Q ss_pred             ccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCC
Q 013354          322 WMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHR  401 (444)
Q Consensus       322 y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~R  401 (444)
                      |+|||++.+.. ++.++|||||||++|||++|..|+..  .......+.. ...+......++++.+||.+||+.||++|
T Consensus       242 y~aPE~~~~~~-~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          242 YMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRN-LKFPLLFTQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             GSCHHHHHCCC-CCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHT-TCCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred             ccChHHhcCCC-CcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhc-cCCCcccccCChhHHHHHHHHccCCCCcC
Confidence            99999997765 89999999999999999998776522  1112222222 22233334567889999999999999999


Q ss_pred             cCHHHHHhCCCCCCC
Q 013354          402 PTAAWLLEHPFVGNA  416 (444)
Q Consensus       402 pt~~elL~hp~~~~~  416 (444)
                      ||++|+|+||||++.
T Consensus       318 ps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          318 PEATDIIENAIFENL  332 (332)
T ss_dssp             CCHHHHHHSTTCCCC
T ss_pred             CCHHHHhhchhhhcC
Confidence            999999999999873


No 81 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.9e-48  Score=372.89  Aligned_cols=260  Identities=26%  Similarity=0.442  Sum_probs=221.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++....    .....+.+.+|+.+++.++|+||+++++++...+..++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG----CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc----chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence            47999999999999999999999999999999986422    22345678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC---
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS---  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~---  311 (444)
                      ||||+++++|.+++.....+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......   
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            99999999999999877789999999999999999999999999999999999999999999999999997653322   


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh-hhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP-AMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      ......|++.|+|||++.+...++.++||||||+++|||++|+.||....... .+...............++.++++||
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHH
Confidence            22345689999999999776645789999999999999999999998755432 22222222222223356899999999


Q ss_pred             HHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          391 RKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      .+||+.||++|||++|+++||||++...
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          243 HKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHCCCCchhCCCHHHHhcCccccChhh
Confidence            9999999999999999999999987643


No 82 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=8.2e-49  Score=377.77  Aligned_cols=260  Identities=30%  Similarity=0.527  Sum_probs=225.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.....  ......+.+.+|+.+++.++|+||+++++++...+..
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   89 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI   89 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc--chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence            34689999999999999999999999999999998863211  1112246788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      ++||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-  168 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-  168 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc-
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999987654332 


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRK  392 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~  392 (444)
                      .....|++.|+|||++.+.. ++.++||||||+++|+|++|..||...........+....  ..++..++.++++||.+
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~  245 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--LKFPPFLSDGSKDLISK  245 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--CCCCTTSCHHHHHHHHH
T ss_pred             cccccCCCCcCCHHHhccCC-CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccc--cCCCCcCCHHHHHHHHH
Confidence            33456899999999997665 8999999999999999999999998766555555544332  25677899999999999


Q ss_pred             HhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          393 CLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       393 ~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ||+.||++|||+.++++||||++...
T Consensus       246 ~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          246 LLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             HhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            99999999999999999999986543


No 83 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=5.9e-48  Score=394.87  Aligned_cols=261  Identities=27%  Similarity=0.435  Sum_probs=212.0

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC--
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD--  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--  229 (444)
                      ....+|++.+.||+|+||.||+|+++.+++.||||++..   ........+.+.+|+.+|++++|+||+++++++...  
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~   99 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL   99 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---TTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCc---hhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC
Confidence            345789999999999999999999999999999999863   223455667899999999999999999999998765  


Q ss_pred             ---CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          230 ---DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       230 ---~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                         ..+|+||||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.
T Consensus       100 ~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          100 LKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence               57999999995 69999999877899999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCC-----------------------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCC------
Q 013354          307 ITGQSC-----------------------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPW------  357 (444)
Q Consensus       307 ~~~~~~-----------------------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf------  357 (444)
                      ......                       ....+||+.|+|||++.....++.++|||||||++|||++|..||      
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~  258 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN  258 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence            644321                       245669999999999766666999999999999999999854443      


Q ss_pred             -----CCCCC-----------------hhhh------------------------HHhcCCCCCCC-----CCCCCCHHH
Q 013354          358 -----SQYEG-----------------VPAM------------------------FKIGNSKELPA-----IPDHLSDEG  386 (444)
Q Consensus       358 -----~~~~~-----------------~~~~------------------------~~~~~~~~~~~-----~~~~~s~~l  386 (444)
                           .....                 ...+                        ..+........     ....+++++
T Consensus       259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  338 (432)
T 3n9x_A          259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG  338 (432)
T ss_dssp             CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred             ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence                 33211                 0000                        00000000001     114589999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .+||++||+.||++|||++|+|+||||++.
T Consensus       339 ~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          339 INLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence            999999999999999999999999999975


No 84 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-48  Score=388.51  Aligned_cols=264  Identities=27%  Similarity=0.449  Sum_probs=213.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|++..+|+.||+|++.............+.+.+|+.+++.++||||+++++++...+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            34689999999999999999999999999999999875322222223345788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++||||+.+ +|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence            999999975 8998887643 58999999999999999999999999999999999999999999999999998764432


Q ss_pred             -CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC------CCC---------
Q 013354          312 -CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS------KEL---------  375 (444)
Q Consensus       312 -~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~---------  375 (444)
                       ......||+.|+|||++.+...++.++|||||||++|||++|.+||........+..+...      ...         
T Consensus       167 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  246 (346)
T 1ua2_A          167 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY  246 (346)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred             ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccc
Confidence             2344568999999999976666899999999999999999999999876655444333210      000         


Q ss_pred             ------CC-----CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          376 ------PA-----IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       376 ------~~-----~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                            +.     +...++.++++||++||+.||++|||+.|+|+||||++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          247 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             ccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence                  00     1145689999999999999999999999999999998753


No 85 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.3e-49  Score=390.81  Aligned_cols=264  Identities=25%  Similarity=0.431  Sum_probs=218.1

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||+|++.............+.+.+|+.++++++||||+++++++...+..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            35799999999999999999999999999999998743222223345678999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc----------------------------------------CCCCHHHHHHHHHHHHHHHHHH
Q 013354          234 IYLEYVSGGSIYKILQDY----------------------------------------GQLGESAIRSYTQQILSGLEYL  273 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~----------------------------------------~~l~~~~~~~i~~qi~~aL~~L  273 (444)
                      +||||+.+++|.+++...                                        ..+++..++.++.||+.||+||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999998521                                        1136788999999999999999


Q ss_pred             HHCCcccCCCCCCceEECCCC--cEEEEeccccccccCCC-----CcccccCCCcccCcccccCc-CCCChhhhHHHHHH
Q 013354          274 HAKNTVHRDIKGANILVDPSG--RVKLADFGMAKHITGQS-----CPLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGC  345 (444)
Q Consensus       274 H~~~ivH~Dlkp~NIll~~~~--~vkL~DFGla~~~~~~~-----~~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGv  345 (444)
                      |+++|+||||||+|||++.++  .+||+|||++..+....     ......||+.|+|||++... ..++.++|||||||
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence            999999999999999998776  89999999998653321     12345699999999998642 44889999999999


Q ss_pred             HHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCC--CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          346 TVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIP--DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       346 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ++|||++|+.||...........+.........+  ..+++++++||.+||+.||++|||+.|+|+||||++..
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            9999999999998877666665554433322222  34799999999999999999999999999999998754


No 86 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.2e-48  Score=405.84  Aligned_cols=259  Identities=27%  Similarity=0.498  Sum_probs=224.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++.+.||+|+||+||+|+++.+++.||||++......   ....+.+.+|+.++++++||||+++++++.....++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence            35899999999999999999999999999999998642211   112467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC---CCCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD---PSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++.....
T Consensus        98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            9999999999999998888999999999999999999999999999999999999995   4567999999999877666


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCC--CCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIP--DHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~s~~l~~  388 (444)
                      .......||+.|+|||++.+ . ++.++|||||||++|+|++|..||........+..+.........+  ..+++++++
T Consensus       178 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  255 (486)
T 3mwu_A          178 TKMKDRIGTAYYIAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD  255 (486)
T ss_dssp             ----CCTTGGGGCCGGGGGS-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHH
T ss_pred             CccCCCcCCCCCCCHHHhCC-C-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHH
Confidence            55556679999999999965 3 8999999999999999999999998877666666665544332222  468999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ||++||+.||++|||+.|+|+||||+...
T Consensus       256 li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          256 LIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             HHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            99999999999999999999999998653


No 87 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=8.4e-49  Score=399.62  Aligned_cols=262  Identities=29%  Similarity=0.499  Sum_probs=209.4

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc---cccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD---AKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~---~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++......   .........+.+|+.+|++++||||+++++++.. +
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            46899999999999999999999999999999998753221   1122233467899999999999999999999754 5


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---cEEEEeccccccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---RVKLADFGMAKHI  307 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~vkL~DFGla~~~  307 (444)
                      ..++||||+.+++|.+++.....+++..++.++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+++..
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence            5899999999999999998888899999999999999999999999999999999999997544   5999999999987


Q ss_pred             cCCCCcccccCCCcccCcccccC--cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH-HhcCCCC--CCCCCCCC
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKN--SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF-KIGNSKE--LPAIPDHL  382 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~--~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-~~~~~~~--~~~~~~~~  382 (444)
                      ..........||+.|+|||++.+  ...++.++|||||||++|||++|+.||........+. .+.....  .+.....+
T Consensus       293 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~  372 (419)
T 3i6u_A          293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV  372 (419)
T ss_dssp             C-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTS
T ss_pred             CCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhccc
Confidence            66555556779999999999853  3447899999999999999999999998755443332 2222221  12223568


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++++.+||++||+.||++|||++|+|+||||++.
T Consensus       373 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            9999999999999999999999999999999874


No 88 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-48  Score=390.83  Aligned_cols=257  Identities=28%  Similarity=0.462  Sum_probs=214.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC--
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD--  230 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--  230 (444)
                      ...+|++.+.||+|+||.||+|+++.+|+.||||++...   .......+.+.+|+.+++.++||||+++++++...+  
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   99 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP---FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL   99 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSST---TSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc---ccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc
Confidence            356899999999999999999999999999999988532   234555678899999999999999999999987653  


Q ss_pred             ----EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          231 ----KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       231 ----~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                          .+|+||||+ +++|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       100 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          100 DDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             TTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence                469999999 8899999987 6799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC---------------
Q 013354          307 ITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN---------------  371 (444)
Q Consensus       307 ~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~---------------  371 (444)
                      ....  .....+|+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+..               
T Consensus       178 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~  255 (367)
T 1cm8_A          178 ADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS  255 (367)
T ss_dssp             CCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred             cccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence            6433  33456899999999998755589999999999999999999999987665444332211               


Q ss_pred             --------------CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          372 --------------SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       372 --------------~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                                    ......+...+++++.+||.+||+.||++|||++|+|+||||++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence                          111223445679999999999999999999999999999999875


No 89 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.2e-49  Score=387.91  Aligned_cols=260  Identities=27%  Similarity=0.445  Sum_probs=210.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||+||+|++..+++.||+|++....    .......+.+|+.+++.++||||+++++++..++..++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH----EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   77 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc----ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEE
Confidence            47999999999999999999999999999999986422    11122245579999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-C
Q 013354          235 YLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-C  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~  312 (444)
                      ||||+. ++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence            999996 58999888754 49999999999999999999999999999999999999999999999999998654332 2


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC---C---CCC----------
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS---K---ELP----------  376 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~---~---~~~----------  376 (444)
                      .....||+.|+|||++.+...++.++|||||||++|||++|+.||...........+...   .   ..+          
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT  236 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence            234468999999999977666899999999999999999999999876544433332110   0   000          


Q ss_pred             ------------CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          377 ------------AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       377 ------------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                                  .....++.++++||.+||+.||++|||++|+|+||||.+....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence                        1123578999999999999999999999999999999876443


No 90 
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=4.7e-48  Score=376.31  Aligned_cols=259  Identities=28%  Similarity=0.455  Sum_probs=222.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||+|++....     ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY   82 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence            357999999999999999999999999999999987421     223356889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  162 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG  162 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred             EEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence            999999999999999888889999999999999999999999999999999999999   77889999999998765432


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC--CCCCCCCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE--LPAIPDHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~s~~l~~  388 (444)
                       ......|++.|+|||++.+.. ++.++|||||||++|||++|..||...........+.....  .......++.++.+
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  240 (304)
T 2jam_A          163 -IMSTACGTPGYVAPEVLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD  240 (304)
T ss_dssp             -TTHHHHSCCCBCCTTTBSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHH
T ss_pred             -ccccccCCCCccChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHH
Confidence             223345899999999997665 89999999999999999999999987665555544443322  22344678999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      ||.+||+.||++|||++|+|+||||++....
T Consensus       241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (304)
T 2jam_A          241 FICHLLEKDPNERYTCEKALSHPWIDGNTAL  271 (304)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHTSHHHHSSCSC
T ss_pred             HHHHHcCCChhHCcCHHHHhcCccccCCCcc
Confidence            9999999999999999999999999876443


No 91 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.7e-48  Score=381.15  Aligned_cols=257  Identities=28%  Similarity=0.422  Sum_probs=209.1

Q ss_pred             CCCeeee-eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          154 GSRWKKG-RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       154 ~~~~~~~-~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      .++|++. ++||+|+||+||+|++..+++.||||++....     ....+.+.+|+.++.++ +||||+++++++..++.
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~   85 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR   85 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence            4578884 78999999999999999999999999986422     12245788999999885 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc---EEEEecccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR---VKLADFGMAKHIT  308 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---vkL~DFGla~~~~  308 (444)
                      +++||||+.+++|.+++.+...+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||++....
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            9999999999999999998888999999999999999999999999999999999999988766   9999999987653


Q ss_pred             CCC--------CcccccCCCcccCcccccCc----CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh------------
Q 013354          309 GQS--------CPLSIKGSPYWMAPEVIKNS----NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP------------  364 (444)
Q Consensus       309 ~~~--------~~~~~~gt~~y~APE~~~~~----~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~------------  364 (444)
                      ...        ......||+.|+|||++...    ..++.++|||||||++|||++|+.||.......            
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            221        12234599999999998641    237889999999999999999999997654211            


Q ss_pred             ---hhHHhcCCCCCCCCC----CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          365 ---AMFKIGNSKELPAIP----DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       365 ---~~~~~~~~~~~~~~~----~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                         ....+.....  .++    ..++.++++||++||+.||++|||+.|+|+||||++..
T Consensus       246 ~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          246 QNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence               1222222221  222    45899999999999999999999999999999999753


No 92 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1.8e-48  Score=419.22  Aligned_cols=259  Identities=25%  Similarity=0.406  Sum_probs=228.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ...+|++.++||+|+||.||+|+++.+++.||||+++...  .......+.+..|..++..+ +|++|+++++++...+.
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--VIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHH--HHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccc--cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            3468999999999999999999999999999999987421  11122345677899999988 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc-CC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT-GQ  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~-~~  310 (444)
                      +|+||||+.+++|.+++.+.+.+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+++... ..
T Consensus       417 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred             EEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence            99999999999999999998899999999999999999999999999999999999999999999999999998643 33


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li  390 (444)
                      ......+||+.|+|||++.+.. ++.++|||||||+||||++|+.||...+....+..+....  ..+|..++.++++||
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li  573 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAIC  573 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC--CCCCTTSCHHHHHHH
T ss_pred             cccccccCCCcccCHhhhcCCC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHH
Confidence            3445677999999999997665 8999999999999999999999998877767777766544  367889999999999


Q ss_pred             HHHhhhCCCCCcCH-----HHHHhCCCCCCC
Q 013354          391 RKCLQRNPLHRPTA-----AWLLEHPFVGNA  416 (444)
Q Consensus       391 ~~~L~~dP~~Rpt~-----~elL~hp~~~~~  416 (444)
                      ++||++||++|+++     +||++||||++.
T Consensus       574 ~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          574 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            99999999999997     999999999864


No 93 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=3.1e-48  Score=385.92  Aligned_cols=258  Identities=37%  Similarity=0.636  Sum_probs=223.0

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|+..+.||+|+||+||+|++..+++.||||++....  .......+.+.+|+.++++++||||+++++++..++..++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCS--SCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccc--ccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            46999999999999999999999999999999987422  2334556788999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          235 YLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      ||||+. |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......   
T Consensus       132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---  207 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  207 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred             EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence            999996 688887754 457999999999999999999999999999999999999999999999999999876433   


Q ss_pred             ccccCCCcccCcccccC--cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHH
Q 013354          314 LSIKGSPYWMAPEVIKN--SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       314 ~~~~gt~~y~APE~~~~--~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~  391 (444)
                      ....||+.|+|||++..  ...++.++|||||||++|||++|+.||........+..+.........+..++.++++||.
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  287 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD  287 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred             CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            34569999999999852  3348899999999999999999999998776665555555444444456678999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      +||+.||++|||++++++||||....+
T Consensus       288 ~~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          288 SCLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HHcccChhhCcCHHHHhhChhhhccCC
Confidence            999999999999999999999976543


No 94 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.1e-48  Score=410.94  Aligned_cols=260  Identities=26%  Similarity=0.423  Sum_probs=224.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.++||+|+||.||+|+++.+|+.||+|++.....  ........+.+|+.+|+.++||||+++++++...+.
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~--~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~  258 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA  258 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh--hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE
Confidence            345679999999999999999999999999999999864211  111223567889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQ--LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +|+||||+.||+|.+++...+.  +++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+++.+..
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            9999999999999999987544  99999999999999999999999999999999999999999999999999988766


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh---hhh-HHhcCCCCCCCCCCCCCHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV---PAM-FKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---~~~-~~~~~~~~~~~~~~~~s~~  385 (444)
                      .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......   ..+ ..+...  ...++..++.+
T Consensus       339 ~~~~~~~~GT~~Y~APEvl~~~~-~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~  415 (576)
T 2acx_A          339 GQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQ  415 (576)
T ss_dssp             TCCEECCCSCGGGCCHHHHTTCE-ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred             CccccccCCCccccCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHH
Confidence            55555667999999999997665 899999999999999999999999765421   222 222221  23567889999


Q ss_pred             HHHHHHHHhhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      +++||++||++||++||     +++|+++||||++.
T Consensus       416 ~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            99999999999999999     89999999999974


No 95 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.6e-48  Score=387.08  Aligned_cols=253  Identities=27%  Similarity=0.409  Sum_probs=214.2

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~  232 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++.....         ...+|+.++.++ +||||+++++++.+.+.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence            4579999999999999999999999999999999864221         234577888887 799999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC----CcEEEEecccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS----GRVKLADFGMAKHIT  308 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~vkL~DFGla~~~~  308 (444)
                      |+||||+.|++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||+..+    +.+||+|||+++...
T Consensus        92 ~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR  171 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence            9999999999999999988889999999999999999999999999999999999998443    349999999998765


Q ss_pred             CCC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC---hhhhHHhcCCCC--CCCCCCCC
Q 013354          309 GQS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG---VPAMFKIGNSKE--LPAIPDHL  382 (444)
Q Consensus       309 ~~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~---~~~~~~~~~~~~--~~~~~~~~  382 (444)
                      ... .....+||+.|+|||++.+.. ++.++|||||||++|||++|..||.....   ......+.....  .......+
T Consensus       172 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  250 (342)
T 2qr7_A          172 AENGLLMTPCYTANFVAPEVLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV  250 (342)
T ss_dssp             CTTCCBCCSSCCSSCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred             CCCCceeccCCCccccCHHHhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence            433 334567899999999997655 88999999999999999999999976322   223333333222  12234678


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++++++||++||+.||++|||+.|+++||||.+.
T Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            9999999999999999999999999999999764


No 96 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2e-48  Score=383.49  Aligned_cols=254  Identities=22%  Similarity=0.350  Sum_probs=196.7

Q ss_pred             Ceeee---eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEEcCCE
Q 013354          156 RWKKG---RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSETLDDK  231 (444)
Q Consensus       156 ~~~~~---~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~  231 (444)
                      +|.+.   +.||+|+||.||+|+++.+++.||||++..     .   ....+.+|+.+++.+. ||||+++++++..+..
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~   80 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----R---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH   80 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----G---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh-----h---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence            45554   789999999999999999999999999863     1   2345678999999997 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---cEEEEecccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---RVKLADFGMAKHIT  308 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~vkL~DFGla~~~~  308 (444)
                      .|+||||+.+++|.+++.+...+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+++...
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~  160 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP  160 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred             EEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence            999999999999999999988899999999999999999999999999999999999997665   79999999998664


Q ss_pred             CCC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC-------hhhhHHhcCCCCCCC--C
Q 013354          309 GQS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG-------VPAMFKIGNSKELPA--I  378 (444)
Q Consensus       309 ~~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-------~~~~~~~~~~~~~~~--~  378 (444)
                      ... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.       ...+..+........  .
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  239 (325)
T 3kn6_A          161 PDNQPLKTPCFTLHYAAPELLNQNG-YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA  239 (325)
T ss_dssp             C----------------------CC-CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH
T ss_pred             CCCCcccccCCCcCccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc
Confidence            433 223456899999999997665 89999999999999999999999976432       223334433322111  1


Q ss_pred             CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          379 PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       379 ~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ...+++++++||.+||+.||++|||+.|+++||||++...
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence            1358999999999999999999999999999999998644


No 97 
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=4.6e-48  Score=390.55  Aligned_cols=259  Identities=27%  Similarity=0.458  Sum_probs=218.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC--CCCeeeEeeeEEcCC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR--HPNIVRYYGSETLDD  230 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~--hpnIv~l~~~~~~~~  230 (444)
                      .+.+|++.+.||+|+||.||+|.+.. ++.||||++....   ......+.+.+|+.+|++++  |+||+++++++..++
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~---~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEeccc---ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            34579999999999999999998865 8999999987532   34556678999999999996  599999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      .+|+||| +.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.+...
T Consensus       130 ~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          130 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             EEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             EEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9999999 55889999999988899999999999999999999999999999999999995 578999999999876543


Q ss_pred             CC---cccccCCCcccCcccccCc----------CCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCCC
Q 013354          311 SC---PLSIKGSPYWMAPEVIKNS----------NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKELP  376 (444)
Q Consensus       311 ~~---~~~~~gt~~y~APE~~~~~----------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~~  376 (444)
                      ..   .....||+.|+|||++.+.          ..++.++|||||||+||||++|+.||...... ..+..+.......
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~  287 (390)
T 2zmd_A          208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  287 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred             CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence            32   2345699999999998652          24889999999999999999999999765433 3344444444444


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          377 AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       377 ~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      .++...+.++++||++||+.||++|||+.|+|+||||+...
T Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            56777899999999999999999999999999999997643


No 98 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3e-48  Score=386.66  Aligned_cols=253  Identities=30%  Similarity=0.434  Sum_probs=213.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-----CCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-----HPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||+||+|++..+++.||||+++      ......+.+..|+.+++.+.     |+||+++++++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~------~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~  105 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR------NIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF  105 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEC------SCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEec------cchhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence            34568999999999999999999999999999999886      23344566778999999986     99999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC------------
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP------------  292 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~------------  292 (444)
                      ...+.+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.            
T Consensus       106 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~  184 (360)
T 3llt_A          106 MYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRR  184 (360)
T ss_dssp             EETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred             eECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhc
Confidence            9999999999999 999999998754  4999999999999999999999999999999999999975            


Q ss_pred             -------------CCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCC
Q 013354          293 -------------SGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQ  359 (444)
Q Consensus       293 -------------~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  359 (444)
                                   ++.+||+|||++......  .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus       185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             TTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCC
Confidence                         788999999999865432  33456899999999998766 89999999999999999999999987


Q ss_pred             CCChhhhHHhcCCCC--------------------------------------------CCCCCCCCCHHHHHHHHHHhh
Q 013354          360 YEGVPAMFKIGNSKE--------------------------------------------LPAIPDHLSDEGKDFVRKCLQ  395 (444)
Q Consensus       360 ~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~s~~l~~Li~~~L~  395 (444)
                      .+....+..+.....                                            .+.++...++++.+||.+||+
T Consensus       262 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  341 (360)
T 3llt_A          262 HEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ  341 (360)
T ss_dssp             SSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence            554433322211000                                            001111234788899999999


Q ss_pred             hCCCCCcCHHHHHhCCCCC
Q 013354          396 RNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       396 ~dP~~Rpt~~elL~hp~~~  414 (444)
                      .||++|||+.|+|+||||+
T Consensus       342 ~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          342 IDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             SSGGGSCCHHHHTTSGGGC
T ss_pred             CChhhCCCHHHHhcCcccC
Confidence            9999999999999999996


No 99 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=2.4e-48  Score=380.26  Aligned_cols=261  Identities=31%  Similarity=0.543  Sum_probs=215.7

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .....+|++.+.||+|+||+||+|++  +++.||+|++...   .......+.+.+|+.++++++||||+++++++...+
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQ---DFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCC---CCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCC---CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34567899999999999999999976  5889999988642   234555678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEECCCCcEEEEeccccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQ---LGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      .+++||||+.+++|.+++.+...   +++..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            99999999999999999987543   999999999999999999999999  9999999999999999999999999997


Q ss_pred             cccCCC-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          306 HITGQS-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       306 ~~~~~~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      ...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+........++..++.
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (309)
T 3p86_A          188 LKASTFLSSKSAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP  266 (309)
T ss_dssp             --------------CCTTSCHHHHTTCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCH
T ss_pred             cccccccccccCCCCccccChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCH
Confidence            654332 223456999999999997766 899999999999999999999999887766665555444445577889999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHh--CCCCCCCC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLE--HPFVGNAA  417 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~--hp~~~~~~  417 (444)
                      ++.+||.+||+.||++|||+.++++  .++++...
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999988  56666543


No 100
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.4e-48  Score=404.33  Aligned_cols=256  Identities=27%  Similarity=0.467  Sum_probs=220.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|++.+.||+|+||+||+|+++.++..||+|++......   ......+.+|+.+++.++||||+++++++.....+++
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  113 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS---TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL  113 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC---chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4799999999999999999999999999999998753221   1224578899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC---CcEEEEeccccccccCCC
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS---GRVKLADFGMAKHITGQS  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~vkL~DFGla~~~~~~~  311 (444)
                      |||||.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||++.......
T Consensus       114 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          114 VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            99999999999999888899999999999999999999999999999999999999764   459999999998877666


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCC--CCCCCHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAI--PDHLSDEGKDF  389 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~s~~l~~L  389 (444)
                      ......||+.|+|||++.. . ++.++|||||||++|+|++|..||........+..+.........  ...++.++++|
T Consensus       194 ~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  271 (494)
T 3lij_A          194 KMKERLGTAYYIAPEVLRK-K-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL  271 (494)
T ss_dssp             CBCCCCSCTTTCCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHH
T ss_pred             cccccCCCcCeeCHHHHcc-c-CCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHH
Confidence            5666779999999999863 3 899999999999999999999999887766666666554432222  24689999999


Q ss_pred             HHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          390 VRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      |++||+.||++|||+.|+|+||||++
T Consensus       272 i~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          272 IKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHHCCCChhhCccHHHHhcCccccc
Confidence            99999999999999999999999975


No 101
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.9e-48  Score=383.25  Aligned_cols=259  Identities=27%  Similarity=0.458  Sum_probs=216.6

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC--CCeeeEeeeEEcC
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH--PNIVRYYGSETLD  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--pnIv~l~~~~~~~  229 (444)
                      ..+.+|++.+.||+|+||.||+|.+. +++.||||++...   .......+.+.+|+.+++.++|  +||+++++++..+
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLE---EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD   81 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECT---TCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeecc---ccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC
Confidence            34678999999999999999999875 5899999998753   2345566788999999999986  9999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..+++|||+ .+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++....
T Consensus        82 ~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           82 QYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             SEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             CEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            999999995 5889999999988899999999999999999999999999999999999997 67899999999987654


Q ss_pred             CCC---cccccCCCcccCcccccC----------cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCC
Q 013354          310 QSC---PLSIKGSPYWMAPEVIKN----------SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKEL  375 (444)
Q Consensus       310 ~~~---~~~~~gt~~y~APE~~~~----------~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~  375 (444)
                      ...   .....||+.|+|||++.+          ...++.++|||||||++|||++|+.||...... ..+..+......
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  239 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  239 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence            332   234569999999999864          134889999999999999999999999765443 333344333444


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ..++...+.++.+||.+||+.||++|||+.|+|+||||+..
T Consensus       240 ~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            46777889999999999999999999999999999999754


No 102
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.7e-48  Score=400.87  Aligned_cols=255  Identities=25%  Similarity=0.415  Sum_probs=208.1

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC----
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD----  229 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~----  229 (444)
                      ..+|++.+.||+|+||+||+|++..+++.||||++...   .......+++.+|+.+|+.++||||+++++++...    
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE  137 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG---GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc---ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence            46899999999999999999999999999999998642   23455667889999999999999999999998654    


Q ss_pred             --CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          230 --DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       230 --~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                        ..+|+||||+.+ +|.+.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       138 ~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          138 EFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             cCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence              467999999965 57777653  5999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCC-------------
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKE-------------  374 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-------------  374 (444)
                      ..........||+.|+|||++.+.. ++.++|||||||+||||++|+.||...+....+..+.....             
T Consensus       215 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~  293 (464)
T 3ttj_A          215 GTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  293 (464)
T ss_dssp             --CCCC----CCCTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred             CCCcccCCCcccccccCHHHHcCCC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence            6655556677999999999998765 89999999999999999999999987665444433221000             


Q ss_pred             -------CCCC---------CCC-----------CCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          375 -------LPAI---------PDH-----------LSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       375 -------~~~~---------~~~-----------~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                             .+..         +..           .+.++++||++||+.||++|||++|+|+||||+.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                   0000         000           1567999999999999999999999999999985


No 103
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=3.4e-48  Score=373.86  Aligned_cols=260  Identities=28%  Similarity=0.451  Sum_probs=205.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||+||+|++..+++.||+|+++..   .......+.+.++...++.++||||+++++++..++..
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT---VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecc---cCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            456899999999999999999999999999999998642   22333445556666678889999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          233 YIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      ++||||+. ++|.+++..    ...+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus        82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99999996 588877754    45799999999999999999999998 9999999999999999999999999999877


Q ss_pred             cCCCCcccccCCCcccCccccc---CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCCCCCCCCCC
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIK---NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~---~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~s  383 (444)
                      ..........||+.|+|||++.   ....++.++|||||||++|||++|+.||...... ..................++
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence            6655555567999999999972   3444899999999999999999999999864433 23333333333333446789


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .++.+||.+||+.||++|||+.|+++||||+..
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            999999999999999999999999999999753


No 104
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.1e-48  Score=405.57  Aligned_cols=259  Identities=29%  Similarity=0.518  Sum_probs=228.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|+++.+++.||||++.....  ......+.+.+|+.++++++||||+++++++...+.++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV--KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc--ccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4579999999999999999999999999999999864322  11223467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEeccccccccCC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~~~~~  310 (444)
                      +||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..+...
T Consensus       103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence            999999999999999988899999999999999999999999999999999999999   56788999999999887666


Q ss_pred             CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCC--CCCCHHHHH
Q 013354          311 SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIP--DHLSDEGKD  388 (444)
Q Consensus       311 ~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~s~~l~~  388 (444)
                      .......||+.|+|||++.+ . ++.++|||||||++|+|++|..||........+..+.........+  ..+++++++
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  260 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHG-T-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD  260 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHH
T ss_pred             cccccCCCCccccCceeecC-C-CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHH
Confidence            55556679999999999865 3 8999999999999999999999998877666666665554433333  468999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||++||++||++|||+.|+|+||||+..
T Consensus       261 li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          261 LIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            9999999999999999999999999864


No 105
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=2.8e-48  Score=373.32  Aligned_cols=261  Identities=28%  Similarity=0.447  Sum_probs=220.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc-cHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK-SKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~-~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ++|++.+.||+|+||.||+|++..+++.||+|+++....... .....+.+.+|+.++++++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            469999999999999999999999999999999875432211 1112467889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC----cEEEEeccccccccC
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG----RVKLADFGMAKHITG  309 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----~vkL~DFGla~~~~~  309 (444)
                      +||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++.....
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            9999999999999999888899999999999999999999999999999999999998876    799999999987765


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCCCCCCHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIPDHLSDEGK  387 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~s~~l~  387 (444)
                      ........|++.|+|||++.+.. ++.++||||||+++|+|++|..||...........+......  ......++.++.
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T 3bhy_A          165 GNEFKNIFGTPEFVAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK  243 (283)
T ss_dssp             -------CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHH
T ss_pred             CCcccccCCCcCccCcceecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHH
Confidence            55445566999999999997665 899999999999999999999999876655555444333221  122356899999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +||++||+.||++|||+.|+|+||||++.
T Consensus       244 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence            99999999999999999999999999864


No 106
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.4e-48  Score=404.15  Aligned_cols=263  Identities=28%  Similarity=0.447  Sum_probs=225.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeeccccc--------ccHHHHHHHHHHHHHHHccCCCCeeeEee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDA--------KSKESAQQLGQEIALLSRLRHPNIVRYYG  224 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~--------~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~  224 (444)
                      ...+|++.+.||+|+||+||+|+++.+++.||+|++.......        ......+.+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            4568999999999999999999999999999999987532111        01123467889999999999999999999


Q ss_pred             eEEcCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---cEEEEec
Q 013354          225 SETLDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---RVKLADF  301 (444)
Q Consensus       225 ~~~~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~vkL~DF  301 (444)
                      ++.....+++|||||.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+||
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  193 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF  193 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence            9999999999999999999999999888999999999999999999999999999999999999998775   6999999


Q ss_pred             cccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCC--C
Q 013354          302 GMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAI--P  379 (444)
Q Consensus       302 Gla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~  379 (444)
                      |++.............||+.|+|||++.. . ++.++|||||||++|+|++|..||........+..+.........  .
T Consensus       194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  271 (504)
T 3q5i_A          194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKK-K-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW  271 (504)
T ss_dssp             TTCEECCTTSCBCCCCSCTTTCCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH
T ss_pred             CCCEEcCCCCccccccCCcCCCCHHHhcc-C-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc
Confidence            99998776655566779999999999863 3 899999999999999999999999887766666666554432211  2


Q ss_pred             CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          380 DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       380 ~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ..++.++++||++||+.||++|||++|+|+||||++..
T Consensus       272 ~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            56899999999999999999999999999999998653


No 107
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=3.9e-48  Score=385.98  Aligned_cols=259  Identities=30%  Similarity=0.479  Sum_probs=220.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|++...    ......+.+.+|+.+++.++||||+++++++..++.+
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  106 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI  106 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC----CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc----cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence            456899999999999999999999999999999998742    2455667899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++||||+++++|.+++.+...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.......
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  186 (360)
T 3eqc_A          107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  186 (360)
T ss_dssp             EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred             EEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence            99999999999999999988999999999999999999999996 99999999999999999999999999997653322


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH------------------------
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF------------------------  367 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~------------------------  367 (444)
                       .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+......                        
T Consensus       187 -~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          187 -ANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -----CCCCTTCCHHHHTTCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -ccCCCCCCCeECHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             23456899999999997765 8999999999999999999999997644322111                        


Q ss_pred             ------------------HhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          368 ------------------KIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       368 ------------------~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                        .+............++.++++||++||+.||++|||++|+|+||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence                              11111222222345799999999999999999999999999999998643


No 108
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.2e-48  Score=384.57  Aligned_cols=264  Identities=28%  Similarity=0.459  Sum_probs=216.4

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHH-HHccCCCCeeeEeeeEEcC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIAL-LSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~-l~~l~hpnIv~l~~~~~~~  229 (444)
                      .....+|++.+.||+|+||+||+|++..+|+.||||++....   .... ...+..|+.+ ++.++|+||+++++++..+
T Consensus        47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~  122 (340)
T 3an0_A           47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFRE  122 (340)
T ss_dssp             CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCC---CCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred             EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEecccc---CcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence            345678999999999999999999999999999999986422   2222 3344445544 7888999999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCCcEEEEecccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                      +.+++||||+.+ +|.+++..    ...+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus       123 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  201 (340)
T 3an0_A          123 GDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS  201 (340)
T ss_dssp             SCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred             CcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            999999999975 99888864    45799999999999999999999987 9999999999999999999999999999


Q ss_pred             ccccCCCCcccccCCCcccCcccccC---cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCCCCCCC
Q 013354          305 KHITGQSCPLSIKGSPYWMAPEVIKN---SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKELPAIPD  380 (444)
Q Consensus       305 ~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~  380 (444)
                      +............||+.|+|||++..   ...++.++|||||||++|||++|+.||...... ..+..+...........
T Consensus       202 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  281 (340)
T 3an0_A          202 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD  281 (340)
T ss_dssp             HHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGG
T ss_pred             eecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcc
Confidence            87754433334569999999999743   234899999999999999999999999865433 23333332222222335


Q ss_pred             CCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          381 HLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       381 ~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      .++.++.+||.+||+.||++|||+.|+++||||......
T Consensus       282 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~  320 (340)
T 3an0_A          282 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK  320 (340)
T ss_dssp             GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccccc
Confidence            689999999999999999999999999999999865443


No 109
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=6.5e-49  Score=384.01  Aligned_cols=261  Identities=25%  Similarity=0.412  Sum_probs=216.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC-
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD-  230 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-  230 (444)
                      ...++|++.+.||+|+||.||+|++..+++.||||++...  ........+.+.+|+.++++++||||+++++++.... 
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   86 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP   86 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTT--TTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcc--ccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence            3457899999999999999999999999999999998642  2234566678999999999999999999999887643 


Q ss_pred             ---EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          231 ---KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       231 ---~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                         ..|+||||+++++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+
T Consensus        87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence               35999999999999999998889999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC--CCCCC
Q 013354          308 TGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP--AIPDH  381 (444)
Q Consensus       308 ~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~  381 (444)
                      .....    .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..................+  .....
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG  245 (311)
T ss_dssp             ---------------CCTTCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT
T ss_pred             cccccccccccccCcCcccCCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC
Confidence            44322    22345899999999998765 8999999999999999999999998766555444433332221  22356


Q ss_pred             CCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          382 LSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       382 ~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ++.++.+||.+||+.||++||++.+++.|+|++.
T Consensus       246 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            8999999999999999999999999999999974


No 110
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.4e-48  Score=384.93  Aligned_cols=261  Identities=30%  Similarity=0.482  Sum_probs=218.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++...   .......+.+.+|+.++++++||||+++++++...+..
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   99 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES---DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRW   99 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC---SSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC---CCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEE
Confidence            346899999999999999999999999999999988642   24455567788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-  311 (444)
                      ++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       100 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            9999999999999998877789999999999999999999999999999999999999999999999999998654432 


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhc--------------------C
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIG--------------------N  371 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~--------------------~  371 (444)
                      ......||+.|+|||++.+...++.++|||||||++|||++|+.||...........+.                    .
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence            23345689999999999876558999999999999999999999998766544332221                    0


Q ss_pred             CCCCCCC---------CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          372 SKELPAI---------PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       372 ~~~~~~~---------~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ....+.+         ...+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            1111111         13579999999999999999999999999999999764


No 111
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.5e-47  Score=382.83  Aligned_cols=258  Identities=26%  Similarity=0.470  Sum_probs=218.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC---
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD---  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~---  229 (444)
                      .+.+|++.+.||+|+||.||+|++..+++.||||++..    .......+.+.+|+.++++++||||+++++++...   
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP----FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC----TTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecc----ccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence            45689999999999999999999999999999999863    23445567889999999999999999999998654   


Q ss_pred             --CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          230 --DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       230 --~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                        ...++||||+. ++|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus       101 ~~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          101 QMKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  178 (364)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ccceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence              46899999996 599999976 57999999999999999999999999999999999999999999999999999866


Q ss_pred             cCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC-----------
Q 013354          308 TGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS-----------  372 (444)
Q Consensus       308 ~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-----------  372 (444)
                      .....    .....||+.|+|||++.+...++.++|||||||++|||++|+.||........+..+...           
T Consensus       179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  258 (364)
T 3qyz_A          179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC  258 (364)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred             CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            43322    234569999999999876666899999999999999999999999876655444333210           


Q ss_pred             ------------------CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          373 ------------------KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       373 ------------------~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                                        .....+...++.++.+||.+||+.||++|||+.|+|+||||++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                              00011225678999999999999999999999999999999975


No 112
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=3.2e-48  Score=380.77  Aligned_cols=261  Identities=30%  Similarity=0.507  Sum_probs=213.8

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc---cccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD---AKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~---~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ++|++.+.||+|+||.||+|+++.+++.||||++......   .........+.+|+.++++++||||+++++++..+. 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            5799999999999999999999999999999998643211   112233456889999999999999999999987665 


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc---EEEEecccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR---VKLADFGMAKHIT  308 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---vkL~DFGla~~~~  308 (444)
                      .++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++....
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence            8999999999999999988888999999999999999999999999999999999999987654   9999999998775


Q ss_pred             CCCCcccccCCCcccCccccc--CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhh-HHhcCCC--CCCCCCCCCC
Q 013354          309 GQSCPLSIKGSPYWMAPEVIK--NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAM-FKIGNSK--ELPAIPDHLS  383 (444)
Q Consensus       309 ~~~~~~~~~gt~~y~APE~~~--~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~~~--~~~~~~~~~s  383 (444)
                      .........||+.|+|||++.  ....++.++|||||||++|+|++|..||........+ ..+....  ..+.....++
T Consensus       169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (322)
T 2ycf_A          169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS  248 (322)
T ss_dssp             CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSC
T ss_pred             cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcC
Confidence            543334456899999999974  2344889999999999999999999999765443222 2222221  1222335689


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .++.+||.+||+.||++|||+.++|+||||++.
T Consensus       249 ~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            999999999999999999999999999999853


No 113
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=7e-48  Score=378.36  Aligned_cols=262  Identities=34%  Similarity=0.637  Sum_probs=216.7

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEc-
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETL-  228 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~-  228 (444)
                      .....+|++.+.||+|+||.||+|++..+++.||||++.....      ..+.+.+|+.+++++ +||||+++++++.. 
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   93 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKK   93 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence            3456789999999999999999999999999999999864221      225678899999999 79999999999876 


Q ss_pred             -----CCEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEec
Q 013354          229 -----DDKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADF  301 (444)
Q Consensus       229 -----~~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DF  301 (444)
                           .+.+++||||+.+++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+||
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred             cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeC
Confidence                 56899999999999999999874  46999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCC-CcccccCCCcccCcccccC----cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC
Q 013354          302 GMAKHITGQS-CPLSIKGSPYWMAPEVIKN----SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP  376 (444)
Q Consensus       302 Gla~~~~~~~-~~~~~~gt~~y~APE~~~~----~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  376 (444)
                      |++....... ......|++.|+|||++..    ...++.++|||||||++|+|++|..||...........+.......
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  253 (326)
T 2x7f_A          174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR  253 (326)
T ss_dssp             TTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred             cCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccc
Confidence            9988764332 2234568999999999862    2337899999999999999999999998766555555444443333


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          377 AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       377 ~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ..+..++.++++||.+||..||++||++.++++||||++...
T Consensus       254 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            445678999999999999999999999999999999987644


No 114
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.7e-48  Score=387.64  Aligned_cols=254  Identities=26%  Similarity=0.458  Sum_probs=213.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc----
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL----  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----  228 (444)
                      ...+|++.+.||+|+||+||+|++..+|+.||||++.....         ...+|+.+++.++|+||+++++++..    
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence            34689999999999999999999999999999998864221         12369999999999999999998843    


Q ss_pred             ----------------------------------CCEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHH
Q 013354          229 ----------------------------------DDKLYIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGL  270 (444)
Q Consensus       229 ----------------------------------~~~~~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL  270 (444)
                                                        +..+++||||+. ++|.+.+..    ...+++..++.++.||+.||
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence                                              345899999997 587777654    46799999999999999999


Q ss_pred             HHHHHCCcccCCCCCCceEEC-CCCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHH
Q 013354          271 EYLHAKNTVHRDIKGANILVD-PSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIE  349 (444)
Q Consensus       271 ~~LH~~~ivH~Dlkp~NIll~-~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~e  349 (444)
                      +|||++||+||||||+|||++ .++.+||+|||+++.+..........+|+.|+|||++.+...++.++|||||||++||
T Consensus       155 ~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (383)
T 3eb0_A          155 GFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE  234 (383)
T ss_dssp             HHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence            999999999999999999997 6889999999999987666666667799999999998776668999999999999999


Q ss_pred             HHcCCCCCCCCCChhhhHHhcCC------------------CCCC---------CCCCCCCHHHHHHHHHHhhhCCCCCc
Q 013354          350 MATTKPPWSQYEGVPAMFKIGNS------------------KELP---------AIPDHLSDEGKDFVRKCLQRNPLHRP  402 (444)
Q Consensus       350 lltG~~Pf~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~s~~l~~Li~~~L~~dP~~Rp  402 (444)
                      |++|+.||........+..+...                  ...+         .++..++.++.+||.+||+.||++||
T Consensus       235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (383)
T 3eb0_A          235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI  314 (383)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence            99999999876655544333210                  0011         14556899999999999999999999


Q ss_pred             CHHHHHhCCCCCCC
Q 013354          403 TAAWLLEHPFVGNA  416 (444)
Q Consensus       403 t~~elL~hp~~~~~  416 (444)
                      |+.|+|+||||++.
T Consensus       315 t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          315 NPYEAMAHPFFDHL  328 (383)
T ss_dssp             CHHHHHTSGGGHHH
T ss_pred             CHHHHhcCHHHHHH
Confidence            99999999999753


No 115
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.7e-47  Score=370.85  Aligned_cols=259  Identities=30%  Similarity=0.535  Sum_probs=215.5

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++....   ......+.+.+|+.++++++||||+++++++..++..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL   79 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc---cchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEE
Confidence            57999999999999999999999999999999886422   122233677889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-
Q 013354          235 YLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-  311 (444)
                      ||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        80 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  158 (299)
T 2r3i_A           80 VFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  158 (299)
T ss_dssp             EEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred             EEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence            999996 6999999875  468999999999999999999999999999999999999999999999999998765432 


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC----------------CCC
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS----------------KEL  375 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~----------------~~~  375 (444)
                      ......+|+.|+|||++.+...++.++|||||||++|||++|+.||...........+...                ...
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T 2r3i_A          159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK  238 (299)
T ss_dssp             CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence            2234468999999999977665799999999999999999999999876654443332110                000


Q ss_pred             CCC-----------CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          376 PAI-----------PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       376 ~~~-----------~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      +.+           ...++.++++||++||+.||++|||+.|+|+||||++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~  291 (299)
T 2r3i_A          239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT  291 (299)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCC
Confidence            111           134789999999999999999999999999999998753


No 116
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=7.1e-48  Score=403.34  Aligned_cols=259  Identities=27%  Similarity=0.425  Sum_probs=221.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.++||+|+||.||+|+++.+|+.||+|++....  .......+.+.+|+.++++++||||+++++++...+.+
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~--~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR--LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH--hhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence            3468999999999999999999999999999999986421  11112346788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDY----GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      |+||||+.|++|.+++.+.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            9999999999999999864    359999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCC-cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC----hhhhHHhcCCCCCCCCCCCCC
Q 013354          309 GQSC-PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG----VPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       309 ~~~~-~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      .... ....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....    ......+...  ...++..++
T Consensus       341 ~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s  417 (543)
T 3c4z_A          341 AGQTKTKGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFS  417 (543)
T ss_dssp             TTCCCBCCCCSCTTTSCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSC
T ss_pred             CCCcccccccCCccccChhhhcCCC-CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccC
Confidence            5433 33457999999999997755 89999999999999999999999976532    1222233222  235678899


Q ss_pred             HHHHHHHHHHhhhCCCCCcC-----HHHHHhCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPT-----AAWLLEHPFVGNA  416 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt-----~~elL~hp~~~~~  416 (444)
                      .++++||++||++||++||+     +++|++||||++.
T Consensus       418 ~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          418 PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            99999999999999999996     5899999999974


No 117
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.6e-47  Score=389.74  Aligned_cols=256  Identities=26%  Similarity=0.450  Sum_probs=211.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc------CCCCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL------RHPNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l------~hpnIv~l~~~~  226 (444)
                      ...+|++.+.||+|+||+||+|++..+++.||||+++.      .....+.+.+|+.+++.+      +|+||+++++++
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~  168 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN------EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF  168 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC------ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence            34689999999999999999999999999999999862      334456677788888777      577999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc--EEEEecc
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR--VKLADFG  302 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--vkL~DFG  302 (444)
                      .....+++||||+. ++|.+++....  .+++..++.++.||+.||+|||+++|+||||||+||||+.++.  +||+|||
T Consensus       169 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          169 TFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             EETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             ccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence            99999999999995 69999998754  4999999999999999999999999999999999999999887  9999999


Q ss_pred             ccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC----------
Q 013354          303 MAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS----------  372 (444)
Q Consensus       303 la~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~----------  372 (444)
                      +++.....  .....||+.|+|||++.+.. ++.++|||||||+||||++|+.||...+....+..+...          
T Consensus       248 ~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~  324 (429)
T 3kvw_A          248 SSCYEHQR--VYTYIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD  324 (429)
T ss_dssp             TCEETTCC--CCSSCSCGGGCCHHHHHTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             cceecCCc--ccccCCCCCccChHHHhCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            99765432  33556999999999998766 899999999999999999999999876544333221100          


Q ss_pred             -----------CCC------------------------------------CCCCCCCCHHHHHHHHHHhhhCCCCCcCHH
Q 013354          373 -----------KEL------------------------------------PAIPDHLSDEGKDFVRKCLQRNPLHRPTAA  405 (444)
Q Consensus       373 -----------~~~------------------------------------~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~  405 (444)
                                 ...                                    ..++...++++.+||++||+.||++|||++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~  404 (429)
T 3kvw_A          325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG  404 (429)
T ss_dssp             TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence                       000                                    011234588999999999999999999999


Q ss_pred             HHHhCCCCCCCCC
Q 013354          406 WLLEHPFVGNAAP  418 (444)
Q Consensus       406 elL~hp~~~~~~~  418 (444)
                      |+|+||||++..+
T Consensus       405 e~L~Hpw~~~~~~  417 (429)
T 3kvw_A          405 QALRHPWLRRRLP  417 (429)
T ss_dssp             HHHTSTTTC----
T ss_pred             HHhCChhhccCCC
Confidence            9999999997543


No 118
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=5.6e-48  Score=383.53  Aligned_cols=260  Identities=25%  Similarity=0.406  Sum_probs=212.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc-----
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL-----  228 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----  228 (444)
                      ..+|++.+.||+|+||.||+|+++.+++.||+|++......   ......+.+|+.+++.++|+||+++++++..     
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS---SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc---ccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            35899999999999999999999999999999988643222   2223466789999999999999999999877     


Q ss_pred             ---CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccc
Q 013354          229 ---DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       229 ---~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                         .+.+++||||+.+ +|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence               4568999999965 777777654 56999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCC-----CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC--CCCCCC
Q 013354          305 KHITGQ-----SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN--SKELPA  377 (444)
Q Consensus       305 ~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--~~~~~~  377 (444)
                      +.+...     .......||+.|+|||++.+...++.++|||||||++|||++|+.||...........+..  ....+.
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            876422     1223456899999999997766689999999999999999999999987655444333221  000011


Q ss_pred             CCCC----------------------------CCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          378 IPDH----------------------------LSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       378 ~~~~----------------------------~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ....                            .++++++||.+||+.||++|||++|+|+||||.+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence            1000                            278899999999999999999999999999998643


No 119
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=6e-48  Score=380.10  Aligned_cols=260  Identities=26%  Similarity=0.426  Sum_probs=217.8

Q ss_pred             CCeeee-eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEE
Q 013354          155 SRWKKG-RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       155 ~~~~~~-~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~  232 (444)
                      .+|.+. +.||+|+||.||+|+++.+++.||+|++.......   .....+.+|+.++..+ +||||+++++++...+.+
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~  104 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ---DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI  104 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE---ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch---HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence            467777 89999999999999999999999999987533222   2345788899999999 469999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcEEEEeccccccc
Q 013354          233 YIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRVKLADFGMAKHI  307 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~vkL~DFGla~~~  307 (444)
                      ++||||+.+++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||++...
T Consensus       105 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence            9999999999999998653  56999999999999999999999999999999999999987   789999999999887


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC--CCCCCCCCCCCHH
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS--KELPAIPDHLSDE  385 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~s~~  385 (444)
                      ..........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+...  .........++.+
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  263 (327)
T 3lm5_A          185 GHACELREIMGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL  263 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred             CCccccccccCCcCccCCeeecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHH
Confidence            6655555667999999999997665 899999999999999999999999876655554444322  2223444678999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      +++||.+||+.||++|||++|+|+||||++...
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            999999999999999999999999999987643


No 120
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.3e-47  Score=372.86  Aligned_cols=257  Identities=40%  Similarity=0.725  Sum_probs=224.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ....|++.+.||+|+||.||+|++..+++.||+|++.....    ....+.+.+|+.+++.++|+||+++++++..+...
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   95 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL   95 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC----STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence            34579999999999999999999999999999999874321    22356788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-  311 (444)
                      ++||||+.+++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        96 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred             EEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence            999999999999999975 579999999999999999999999999999999999999999999999999998765433 


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVR  391 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~  391 (444)
                      ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...........+.... .+.++..++.++.+||.
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~  252 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVE  252 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCCSSCCHHHHHHHH
T ss_pred             ccCccCCCcCccCHHHHhcCC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC-CCCCccccCHHHHHHHH
Confidence            233456899999999997665 8899999999999999999999998766555444443332 34667789999999999


Q ss_pred             HHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          392 KCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       392 ~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +||+.||++|||+.++++||||...
T Consensus       253 ~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          253 ACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HHcCCChhhCcCHHHHhhChhhhcC
Confidence            9999999999999999999999754


No 121
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.8e-47  Score=369.79  Aligned_cols=259  Identities=25%  Similarity=0.401  Sum_probs=216.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++...  ........+.+.+|+.++++++||||+++++++..++.+
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~   86 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIP--PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY   86 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECC--SSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccC--ccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeE
Confidence            356899999999999999999999999999999998643  234456678899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      ++||||+++++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        87 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999987644322


Q ss_pred             --cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC---CCCCCCCCHHHH
Q 013354          313 --PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL---PAIPDHLSDEGK  387 (444)
Q Consensus       313 --~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~s~~l~  387 (444)
                        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..................   ...+..+++++.
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  245 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS  245 (294)
T ss_dssp             --------CCSSCCHHHHHTCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHH
T ss_pred             cccCccccCccccCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHH
Confidence              22356899999999998766 899999999999999999999999876655444333322221   124567899999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                      ++|.+||++||++||+..+.+.+.|..
T Consensus       246 ~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          246 NVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            999999999999999666666655543


No 122
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.9e-47  Score=375.08  Aligned_cols=268  Identities=22%  Similarity=0.360  Sum_probs=202.4

Q ss_pred             CCCCCCCeeeeeeecccCceEEEEEEEcCCCc---EEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          150 PTSPGSRWKKGRLLGRGTFGHVYLGFNSESGE---MCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       150 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~---~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ......+|++.+.||+|+||.||+|++..+++   .||+|+++..   .......+.+.+|+.++++++||||+++++++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD---IIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc---ccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            34456789999999999999999999887665   8999988642   12233467889999999999999999999999


Q ss_pred             EcCCEE------EEEEeccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC
Q 013354          227 TLDDKL------YIYLEYVSGGSIYKILQDYG------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG  294 (444)
Q Consensus       227 ~~~~~~------~lv~e~~~ggsL~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  294 (444)
                      ......      ++||||+.+++|.+++....      .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            877655      99999999999999997543      589999999999999999999999999999999999999999


Q ss_pred             cEEEEeccccccccCCCCc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhc
Q 013354          295 RVKLADFGMAKHITGQSCP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIG  370 (444)
Q Consensus       295 ~vkL~DFGla~~~~~~~~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  370 (444)
                      .+||+|||+++........   ....+++.|+|||++.+.. ++.++|||||||++|||++ |+.||...........+.
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  253 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI  253 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh
Confidence            9999999999876443322   2234678899999997665 8999999999999999999 999998877766666655


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcC-------HHHHHhCCCCCCCCCCcCC
Q 013354          371 NSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPT-------AAWLLEHPFVGNAAPLERP  422 (444)
Q Consensus       371 ~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt-------~~elL~hp~~~~~~~~~~~  422 (444)
                      .... ...+..++.++.+||.+||+.||++|||       ++++++|+|+......+-.
T Consensus       254 ~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~  311 (323)
T 3qup_A          254 GGNR-LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLY  311 (323)
T ss_dssp             TTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------------
T ss_pred             cCCC-CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCC
Confidence            4443 3567789999999999999999999999       7889999999987655443


No 123
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=3.7e-47  Score=373.85  Aligned_cols=254  Identities=26%  Similarity=0.411  Sum_probs=213.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEEc--C
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSETL--D  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~--~  229 (444)
                      ..++|++.+.||+|+||.||+|++..+++.||+|+++.     ..   .+.+.+|+.++++++ |+||+++++++..  .
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~  105 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VK---KKKIKREIKILENLRGGPNIITLADIVKDPVS  105 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC
Confidence            34689999999999999999999999999999998862     11   256789999999997 9999999999987  6


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC-cEEEEecccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG-RVKLADFGMAKHIT  308 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~vkL~DFGla~~~~  308 (444)
                      ...++||||+.+++|.++++   .+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++...
T Consensus       106 ~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          106 RTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             CCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             CceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            77999999999999999885   489999999999999999999999999999999999998776 89999999998876


Q ss_pred             CCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHh-------------cCCC-
Q 013354          309 GQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKI-------------GNSK-  373 (444)
Q Consensus       309 ~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~-------------~~~~-  373 (444)
                      .........++..|+|||++.+...++.++|||||||++|||++|+.||...... ..+..+             .... 
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  262 (330)
T 3nsz_A          183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  262 (330)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence            6655566679999999999977566899999999999999999999999543322 111110             0000 


Q ss_pred             ---------------------CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          374 ---------------------ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       374 ---------------------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                           .....+..++.++++||.+||+.||++|||++|+|+||||++..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                                 00112233799999999999999999999999999999999753


No 124
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=9.2e-48  Score=377.01  Aligned_cols=256  Identities=24%  Similarity=0.402  Sum_probs=212.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC--
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD--  230 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--  230 (444)
                      ...+|++.++||+|+||+||+|++..+++.||||++.....    ....+.+.+|+.++++++||||+++++++....  
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   82 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF----LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG----GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc
Confidence            35689999999999999999999999999999999864221    122456778999999999999999999988654  


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE----CCCCcEEEEeccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQ---LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV----DPSGRVKLADFGM  303 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~vkL~DFGl  303 (444)
                      ..++||||+.+++|.+++.....   +++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            78999999999999999987543   9999999999999999999999999999999999999    7778899999999


Q ss_pred             cccccCCCCcccccCCCcccCcccccC-------cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh----hhHHhcCC
Q 013354          304 AKHITGQSCPLSIKGSPYWMAPEVIKN-------SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP----AMFKIGNS  372 (444)
Q Consensus       304 a~~~~~~~~~~~~~gt~~y~APE~~~~-------~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~----~~~~~~~~  372 (444)
                      ++............||+.|+|||++..       ...++.++|||||||++|||++|+.||.......    .+..+...
T Consensus       163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            998776666666779999999999862       2448899999999999999999999997544322    22222111


Q ss_pred             CC-----------------------CCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCC
Q 013354          373 KE-----------------------LPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPF  412 (444)
Q Consensus       373 ~~-----------------------~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~  412 (444)
                      ..                       ...++..++..+.+||++||+.||++|||++|+|+||-
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            10                       01223345678899999999999999999999999973


No 125
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.1e-47  Score=391.38  Aligned_cols=252  Identities=28%  Similarity=0.463  Sum_probs=209.1

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc------
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL------  228 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~------  228 (444)
                      .+|++.+.||+|+||.||+|+++.+++.||||++.....         ...+|+.+|+.++|+||+++++++..      
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---------hHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence            469999999999999999999999999999998864211         23369999999999999999998743      


Q ss_pred             CCEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC-CcEEEEeccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS-GRVKLADFGM  303 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~vkL~DFGl  303 (444)
                      ...+++||||+.+ +|.+++..    ...+++..++.++.||+.||+|||++||+||||||+||||+.+ +.+||+|||+
T Consensus       125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchh
Confidence            2247799999965 67766643    3579999999999999999999999999999999999999865 5689999999


Q ss_pred             cccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC------------
Q 013354          304 AKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN------------  371 (444)
Q Consensus       304 a~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~------------  371 (444)
                      ++.+..........||+.|+|||++.+...++.++|||||||+||||++|+.||...+....+..+..            
T Consensus       204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            99876655556677999999999997765689999999999999999999999987665444433211            


Q ss_pred             ------CCCCCC---------CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          372 ------SKELPA---------IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       372 ------~~~~~~---------~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                            ....+.         ++..++.++++||.+||++||++|||+.|+|+||||++.
T Consensus       284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence                  001111         234678999999999999999999999999999999764


No 126
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.2e-47  Score=368.25  Aligned_cols=258  Identities=31%  Similarity=0.542  Sum_probs=220.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE--cCCE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET--LDDK  231 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--~~~~  231 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++....   ......+.+.+|+.++++++||||+++++++.  ....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc---CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence            358999999999999999999999999999999987422   23455678999999999999999999999874  4678


Q ss_pred             EEEEEeccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCCCceEECCCCcEEEEecc
Q 013354          232 LYIYLEYVSGGSIYKILQDYG----QLGESAIRSYTQQILSGLEYLHAKN-----TVHRDIKGANILVDPSGRVKLADFG  302 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~vkL~DFG  302 (444)
                      +++||||+++++|.+++....    .+++..++.++.||+.||.|||+++     |+||||||+|||++.++.+||+|||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            999999999999999997642    3999999999999999999999999     9999999999999999999999999


Q ss_pred             ccccccCCCC-cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCC
Q 013354          303 MAKHITGQSC-PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDH  381 (444)
Q Consensus       303 la~~~~~~~~-~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  381 (444)
                      ++........ .....|++.|+|||++.+.. ++.++||||||+++|+|++|+.||...........+.... .+.++..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~  239 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYR  239 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCCTT
T ss_pred             hheeeccccccccccCCCccccChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc-cccCCcc
Confidence            9987654322 12345899999999997765 8999999999999999999999998766555555544433 3467788


Q ss_pred             CCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          382 LSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       382 ~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++.++.+||.+||+.||++|||+.|||+|+|+.+.
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            99999999999999999999999999999999864


No 127
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.1e-47  Score=370.60  Aligned_cols=257  Identities=28%  Similarity=0.500  Sum_probs=222.7

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      .+|++.+.||+|+||.||+|++..+++.||+|++......   ....+.+.+|+.++++++||||+++++++...+..++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            5799999999999999999999999999999998743222   2234678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC---CcEEEEeccccccccCCC
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS---GRVKLADFGMAKHITGQS  311 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~vkL~DFGla~~~~~~~  311 (444)
                      ||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+||+++.+   +.+||+|||++.......
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            99999999999999888889999999999999999999999999999999999999754   469999999998776555


Q ss_pred             CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCC--CCCCHHHHHH
Q 013354          312 CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIP--DHLSDEGKDF  389 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~s~~l~~L  389 (444)
                      ......+++.|+|||++.+ . ++.++||||||+++|+|++|..||...........+.........+  ..++.++.+|
T Consensus       179 ~~~~~~~~~~y~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  256 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL  256 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHH
T ss_pred             ccccccCcccccChHHhcC-C-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHH
Confidence            4455568999999999864 3 7899999999999999999999998866655555554443322222  5689999999


Q ss_pred             HHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          390 VRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       390 i~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      |++||+.||++|||+.|+|+||||++.
T Consensus       257 i~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          257 IRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            999999999999999999999999764


No 128
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=4.7e-47  Score=380.48  Aligned_cols=252  Identities=27%  Similarity=0.448  Sum_probs=217.2

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-------CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-------ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYG  224 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-------~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~  224 (444)
                      ..++|++++.||+|+||.||+|++.       .++..||+|+++..    ......+.+.+|+.+++.+ +||||+++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT----CBHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC----cCHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            3468999999999999999999874       34567999988632    3445567899999999999 8999999999


Q ss_pred             eEEcCCEEEEEEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCce
Q 013354          225 SETLDDKLYIYLEYVSGGSIYKILQDYG----------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANI  288 (444)
Q Consensus       225 ~~~~~~~~~lv~e~~~ggsL~~~l~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  288 (444)
                      ++..++.+|+||||+.+++|.+++....                .+++..++.++.||+.||+|||++||+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            9999999999999999999999998753                378999999999999999999999999999999999


Q ss_pred             EECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChh
Q 013354          289 LVDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVP  364 (444)
Q Consensus       289 ll~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~  364 (444)
                      ||+.++.+||+|||+++.......   .....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||.......
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~  313 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  313 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999999986654322   22344778999999997765 8999999999999999999 999998876655


Q ss_pred             hhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          365 AMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ....+.... .+..+..++.++.+||.+||+.||++|||+.|++++
T Consensus       314 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          314 LFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            555554443 346778899999999999999999999999999874


No 129
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.8e-47  Score=370.32  Aligned_cols=262  Identities=27%  Similarity=0.432  Sum_probs=217.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE--cCCE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET--LDDK  231 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--~~~~  231 (444)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+.+|+.+++.++|+||+++++++.  ....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR-RIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH-HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc-ccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            35799999999999999999999999999999998642111 11234567899999999999999999999984  4567


Q ss_pred             EEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .++||||+.++ |.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            89999999766 87877763  4699999999999999999999999999999999999999999999999999987643


Q ss_pred             CC---CcccccCCCcccCcccccCcC-CCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHH
Q 013354          310 QS---CPLSIKGSPYWMAPEVIKNSN-GCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       310 ~~---~~~~~~gt~~y~APE~~~~~~-~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~  385 (444)
                      ..   ......||+.|+|||++.+.. .++.++||||||+++|||++|+.||...........+....  ..++..++.+
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~  239 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--YAIPGDCGPP  239 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC--CCCCSSSCHH
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC--CCCCCccCHH
Confidence            22   223455899999999987543 24789999999999999999999998766555555544432  2567789999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      +.+||++||+.||++|||+.|+++||||++....
T Consensus       240 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence            9999999999999999999999999999876443


No 130
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=8.2e-48  Score=373.20  Aligned_cols=262  Identities=34%  Similarity=0.611  Sum_probs=198.4

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.+.||+|+||.||+|++..+++.||||++...    ......+.+.+|+.++++++||||+++++++...+.
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE----KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhh----hcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence            3456899999999999999999999889999999987532    123345678899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccc
Q 013354          232 LYIYLEYVSGGSIYKILQD--------YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGM  303 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGl  303 (444)
                      .++||||+.+++|.+++..        ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            9999999999999999974        34589999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC------CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC----
Q 013354          304 AKHITGQS------CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK----  373 (444)
Q Consensus       304 a~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~----  373 (444)
                      +.......      ......||+.|+|||++.....++.++|||||||++|||++|+.||................    
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  247 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL  247 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence            87654321      12234589999999998764448899999999999999999999998766544433222111    


Q ss_pred             ----CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          374 ----ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       374 ----~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                          ..+.....++.++.+||.+||+.||++|||+.++++||||++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence                11233457899999999999999999999999999999998753


No 131
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=2.1e-47  Score=372.80  Aligned_cols=250  Identities=28%  Similarity=0.481  Sum_probs=211.7

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      .++|++++.||+|+||+||+|.+..+++.||+|++..     ......+.+.+|+.++++++||||+++++++..++..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence            4689999999999999999999999999999998752     34556678999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          234 IYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      +||||+.+++|.++++. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            99999999999999987 45799999999999999999999999999999999999999999999999999986643322


Q ss_pred             c---------------ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhc-CCCCCC
Q 013354          313 P---------------LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIG-NSKELP  376 (444)
Q Consensus       313 ~---------------~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~~~~~~  376 (444)
                      .               ....||+.|+|||++.+.. ++.++|||||||++|||++|..||............. ......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  242 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR  242 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence            1               1456999999999997665 8999999999999999999999987543221110000 000001


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          377 AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       377 ~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ..+..+++++.+||.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            346678999999999999999999999999887


No 132
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=4.1e-47  Score=374.04  Aligned_cols=252  Identities=23%  Similarity=0.393  Sum_probs=216.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCc---EEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGE---MCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~---~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ....+|++.+.||+|+||.||+|++..+++   .||||+++.    .......+.+.+|+.++++++||||+++++++..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA----GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECT----TCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCC----CCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            345789999999999999999999986555   499998863    2344556789999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      .+..++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            99999999999999999999764 57999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCc----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCC
Q 013354          308 TGQSCP----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHL  382 (444)
Q Consensus       308 ~~~~~~----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  382 (444)
                      ......    ....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||...........+...... ..+..+
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~  279 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL-PAPMGC  279 (325)
T ss_dssp             C----CCEECC---CCGGGSCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC-CCCTTC
T ss_pred             ccCccceeeccCCCCcccccCHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC-CCCCCc
Confidence            543221    2233677899999997655 8999999999999999999 99999887766666666555443 567789


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      +.++.+||.+||+.||++|||+.+|++
T Consensus       280 ~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          280 PHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999999876


No 133
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.3e-47  Score=370.46  Aligned_cols=263  Identities=37%  Similarity=0.635  Sum_probs=218.4

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .....+|++.+.||+|+||.||+|++..+++.||+|++...     .....+.+.+|+.+++.++||||+++++++..++
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG   89 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-----CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC
Confidence            34557899999999999999999999999999999988632     2223467889999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..++||||+.+++|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            99999999999999999876 35699999999999999999999999999999999999999999999999998764321


Q ss_pred             C-CCcccccCCCcccCccccc----CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC-CCCCCCCC
Q 013354          310 Q-SCPLSIKGSPYWMAPEVIK----NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL-PAIPDHLS  383 (444)
Q Consensus       310 ~-~~~~~~~gt~~y~APE~~~----~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~s  383 (444)
                      . .......|++.|+|||++.    ....++.++||||||+++|+|++|..||...........+...... ...+..++
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 2j7t_A          170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS  249 (302)
T ss_dssp             HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSC
T ss_pred             cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccC
Confidence            1 1122345899999999984    2334789999999999999999999999876655554444333221 23456789


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      .++.+||.+||+.||++|||+.++++||||++...
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence            99999999999999999999999999999998644


No 134
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=8.4e-47  Score=370.41  Aligned_cols=261  Identities=31%  Similarity=0.512  Sum_probs=215.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEc-CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc---CCCCeeeEeeeEE--
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNS-ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL---RHPNIVRYYGSET--  227 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~-~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l---~hpnIv~l~~~~~--  227 (444)
                      ..+|++.+.||+|+||.||+|++. .+++.||+|++........   ....+.+|+.+++.+   +||||+++++++.  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc---CCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence            468999999999999999999995 6789999999875332211   112344566666655   8999999999987  


Q ss_pred             ---cCCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecc
Q 013354          228 ---LDDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFG  302 (444)
Q Consensus       228 ---~~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFG  302 (444)
                         ....+++||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg  165 (326)
T 1blx_A           87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  165 (326)
T ss_dssp             ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCc
Confidence               5567899999997 69999998754  39999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC-----------
Q 013354          303 MAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN-----------  371 (444)
Q Consensus       303 la~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-----------  371 (444)
                      ++.............||+.|+|||++.+.. ++.++|||||||++|||++|+.||........+..+..           
T Consensus       166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          166 LARIYSFQMALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             ccccccCCCCccccccccceeCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence            998765544445567899999999997665 89999999999999999999999987655444333211           


Q ss_pred             --------------CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          372 --------------SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       372 --------------~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                                    ......+...++.++++||.+||+.||++|||+.|+|+||||++....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence                          001112346789999999999999999999999999999999987544


No 135
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3.7e-47  Score=381.15  Aligned_cols=256  Identities=24%  Similarity=0.386  Sum_probs=205.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC---
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD---  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~---  230 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||||++...   .......+.+.+|+.+++.++||||+++++++...+   
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECT---TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccc---cCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            35899999999999999999999999999999998742   233455678889999999999999999999987654   


Q ss_pred             ---EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          231 ---KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       231 ---~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                         .+++||||+. ++|.+++.  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       101 ~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          101 EFQDVYIVMELMD-ANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             TCCEEEEEEECCS-EEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             cccceEEEEEcCC-CCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence               7899999996 57888886  46999999999999999999999999999999999999999999999999999877


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC-----------
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP-----------  376 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~-----------  376 (444)
                      ..........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+......+           
T Consensus       178 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          178 GTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             ------------CTTCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             ccccccCCceecCCccCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            6554445567999999999997765 8999999999999999999999998766554444332211100           


Q ss_pred             ---------CC--------------CC------CCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          377 ---------AI--------------PD------HLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       377 ---------~~--------------~~------~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                               ..              +.      ..+.++++||++||+.||++|||++|+|+||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                     00              00      125689999999999999999999999999999854


No 136
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.6e-48  Score=391.82  Aligned_cols=252  Identities=15%  Similarity=0.136  Sum_probs=204.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHH---HHHHccCCCCeeeEe------
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEI---ALLSRLRHPNIVRYY------  223 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei---~~l~~l~hpnIv~l~------  223 (444)
                      ...+|++.+.||+|+||+||+|+++.+|+.||||++.....  ......+.+.+|+   .++++++||||++++      
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC---CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCC
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccc--cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhh
Confidence            34689999999999999999999999999999999874322  2233457788999   555666899999998      


Q ss_pred             -eeEEcCC-----------------EEEEEEeccCCCCHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHCCc
Q 013354          224 -GSETLDD-----------------KLYIYLEYVSGGSIYKILQDYGQLGE-------SAIRSYTQQILSGLEYLHAKNT  278 (444)
Q Consensus       224 -~~~~~~~-----------------~~~lv~e~~~ggsL~~~l~~~~~l~~-------~~~~~i~~qi~~aL~~LH~~~i  278 (444)
                       +++...+                 ..|+||||+ +|+|.+++.+.+.+++       ..++.++.||+.||+|||++||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence             6655543                 288999999 6899999987655665       7888899999999999999999


Q ss_pred             ccCCCCCCceEECCCCcEEEEeccccccccCCCCcccccCCCcccCcccccCc----------CCCChhhhHHHHHHHHH
Q 013354          279 VHRDIKGANILVDPSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNS----------NGCNLAVDIWSLGCTVI  348 (444)
Q Consensus       279 vH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~----------~~~s~~sDvwSlGvil~  348 (444)
                      +||||||+||||+.++.+||+|||+++....  ......| +.|+|||++.+.          ..++.++|||||||+||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            9999999999999999999999999986433  2334557 999999999766          13899999999999999


Q ss_pred             HHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          349 EMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       349 elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ||++|+.||...........+..      ....+++++++||.+||+.||++|||+.|+|+||||++.
T Consensus       305 elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHHSSCCC------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHHCCCCCcccccccchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            99999999976554443333322      235789999999999999999999999999999999753


No 137
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=7.8e-47  Score=374.97  Aligned_cols=260  Identities=25%  Similarity=0.454  Sum_probs=215.7

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC--
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD--  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--  229 (444)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++..    .........+.+|+.++++++||||+++++++..+  
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   83 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP----FDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSF   83 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC----CSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCS
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecc----cccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccccc
Confidence            345789999999999999999999999999999998863    23345567788999999999999999999987654  


Q ss_pred             ---CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          230 ---DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       230 ---~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                         ...++||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        84 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           84 ENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             TTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence               67899999996 699999987 5799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCC-----------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC----
Q 013354          307 ITGQSC-----------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN----  371 (444)
Q Consensus       307 ~~~~~~-----------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~----  371 (444)
                      ......           .....||+.|+|||++.....++.++|||||||++|||++|+.||...+....+..+..    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  241 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT  241 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence            643221           12346899999999987655589999999999999999999999987654332221110    


Q ss_pred             ---------------------CCCC-----CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          372 ---------------------SKEL-----PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       372 ---------------------~~~~-----~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                           ....     ......++.++.+||.+||+.||++|||+.|+|+||||+...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence                                 0000     011246899999999999999999999999999999998754


No 138
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=7.1e-48  Score=386.11  Aligned_cols=256  Identities=25%  Similarity=0.437  Sum_probs=199.5

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC----
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD----  229 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~----  229 (444)
                      ..+|++.+.||+|+||.||+|++..+|+.||||++...   .......+.+.+|+.+++.++||||+++++++...    
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  104 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP---FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE  104 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST---TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc---ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence            46899999999999999999999999999999988532   23445567888999999999999999999998654    


Q ss_pred             --CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          230 --DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       230 --~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                        ..+++|||++ +++|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          105 EFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             GCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             cCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence              5689999999 7899999876 67999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC---------------
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS---------------  372 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~---------------  372 (444)
                      ...  .....||+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+...               
T Consensus       183 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          183 ADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             ccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            433  234568999999999987556899999999999999999999999876654433322110               


Q ss_pred             ---------CCCC-----CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          373 ---------KELP-----AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       373 ---------~~~~-----~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                               ...+     .+...++.++.+||.+||+.||++|||++|+|+||||++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence                     0001     1123578999999999999999999999999999999875


No 139
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.4e-48  Score=383.33  Aligned_cols=260  Identities=27%  Similarity=0.469  Sum_probs=216.7

Q ss_pred             CCCeeeeeeecccCceEEEEEEEc---CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcC
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNS---ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLD  229 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~---~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~  229 (444)
                      ..+|++.+.||+|+||.||+|++.   .+++.||||+++..... ......+.+.+|+.+++++ +|+||+++++++..+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh-hhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            368999999999999999999984   57999999998642211 1111224566799999999 699999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +.+++||||+.+++|.+++.....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+..
T Consensus       132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          132 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence            99999999999999999999888999999999999999999999999999999999999999999999999999986543


Q ss_pred             CC--CcccccCCCcccCcccccCc-CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh---h-hHHhcCCCCCCCCCCCC
Q 013354          310 QS--CPLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP---A-MFKIGNSKELPAIPDHL  382 (444)
Q Consensus       310 ~~--~~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~-~~~~~~~~~~~~~~~~~  382 (444)
                      ..  ......||+.|+|||++.+. ..++.++|||||||++|||++|+.||.......   . ...+..  ..+.++..+
T Consensus       212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~  289 (355)
T 1vzo_A          212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEM  289 (355)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTTS
T ss_pred             CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCccc
Confidence            22  22345699999999999753 337889999999999999999999997543221   1 122211  234567889


Q ss_pred             CHHHHHHHHHHhhhCCCCCc-----CHHHHHhCCCCCCC
Q 013354          383 SDEGKDFVRKCLQRNPLHRP-----TAAWLLEHPFVGNA  416 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rp-----t~~elL~hp~~~~~  416 (444)
                      +..+++||.+||+.||++||     +++|+++||||++.
T Consensus       290 ~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            99999999999999999999     99999999999864


No 140
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=5.6e-47  Score=383.05  Aligned_cols=254  Identities=30%  Similarity=0.474  Sum_probs=208.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC---
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD---  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~---  230 (444)
                      ..+|++.+.||+|+||+||+|++..+++ +|+|++.....         ...+|+.+++.++||||+++++++...+   
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~  108 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKK  108 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSS
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCC
Confidence            3479999999999999999999987665 88887753211         1236999999999999999999985433   


Q ss_pred             ---EEEEEEeccCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC-CCCcEEEEecc
Q 013354          231 ---KLYIYLEYVSGGSIYKILQ----DYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD-PSGRVKLADFG  302 (444)
Q Consensus       231 ---~~~lv~e~~~ggsL~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~vkL~DFG  302 (444)
                         .+++||||+.++ +.+.+.    ....+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus       109 ~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG  187 (394)
T 4e7w_A          109 DEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG  187 (394)
T ss_dssp             SCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             CceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence               388999999764 444333    245799999999999999999999999999999999999998 78999999999


Q ss_pred             ccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC----------
Q 013354          303 MAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS----------  372 (444)
Q Consensus       303 la~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~----------  372 (444)
                      +++............+|+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+...          
T Consensus       188 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          188 SAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK  267 (394)
T ss_dssp             TCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             CcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            9998766666666779999999999977666899999999999999999999999876655444332210          


Q ss_pred             --------CCCC---------CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          373 --------KELP---------AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       373 --------~~~~---------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                              ...+         .++..+++++.+||.+||+.||++|||+.|+|+||||++...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence                    1111         123458899999999999999999999999999999997543


No 141
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=6.1e-47  Score=365.91  Aligned_cols=259  Identities=41%  Similarity=0.678  Sum_probs=213.7

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYIY  235 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv  235 (444)
                      +|....+||+|+||.||+|++..+++.||+|++...     .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   97 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF   97 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-----CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-----chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence            344455899999999999999999999999988642     223446788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC-CCcEEEEeccccccccCCC
Q 013354          236 LEYVSGGSIYKILQDYG---QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP-SGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       236 ~e~~~ggsL~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~vkL~DFGla~~~~~~~  311 (444)
                      |||+.+++|.+++....   .+++..++.++.||+.||.|||++||+|+||||+||+++. ++.+||+|||++.......
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            99999999999998752   4678999999999999999999999999999999999987 8899999999998765432


Q ss_pred             -CcccccCCCcccCcccccCc-CCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh-hHHhcCCCCCCCCCCCCCHHHHH
Q 013354          312 -CPLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA-MFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       312 -~~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                       ......|++.|+|||++.+. ..++.++||||||+++|||++|+.||........ ..........+.++..++.++.+
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA  257 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHH
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHH
Confidence             22345689999999998654 2378999999999999999999999976443322 22222223445678889999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      ||.+||+.||++||+++++|+||||+.....
T Consensus       258 li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  288 (295)
T 2clq_A          258 FILKCFEPDPDKRACANDLLVDEFLKVSSKK  288 (295)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHTSGGGCC----
T ss_pred             HHHHHccCChhhCCCHHHHhcChhhhhcccc
Confidence            9999999999999999999999999876443


No 142
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.3e-47  Score=370.15  Aligned_cols=259  Identities=40%  Similarity=0.684  Sum_probs=216.6

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|++..+|+.||+|++....       ..+.+.+|+.+++.++||||+++++++...+.
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   98 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD   98 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE
Confidence            34568999999999999999999999999999999886421       13567889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      +++||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            9999999999999999974 457999999999999999999999999999999999999999999999999999876543


Q ss_pred             C-CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC-CCCCCCCCCCHHHHH
Q 013354          311 S-CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK-ELPAIPDHLSDEGKD  388 (444)
Q Consensus       311 ~-~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~s~~l~~  388 (444)
                      . ......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||...........+.... .....+..++.++.+
T Consensus       179 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (314)
T 3com_A          179 MAKRNTVIGTPFWMAPEVIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD  257 (314)
T ss_dssp             BSCBCCCCSCGGGCCHHHHSSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred             ccccCccCCCCCccChhhcCCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHH
Confidence            2 233456899999999997665 8999999999999999999999998766544443332222 112335568999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhCCCCCCCCC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEHPFVGNAAP  418 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~  418 (444)
                      ||.+||+.||++|||+.++++||||++...
T Consensus       258 li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          258 FVKQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             HHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence            999999999999999999999999987643


No 143
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.5e-47  Score=379.39  Aligned_cols=253  Identities=26%  Similarity=0.430  Sum_probs=215.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEE-----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGF-----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~-----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~  226 (444)
                      ..++|++.+.||+|+||.||+|+     +..+++.||||+++.    .......+.+.+|+.++.++ +||||+++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecC----cCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            45789999999999999999998     455679999999863    23344567889999999999 789999999998


Q ss_pred             EcCC-EEEEEEeccCCCCHHHHHHhcCC----------------------------------------------------
Q 013354          227 TLDD-KLYIYLEYVSGGSIYKILQDYGQ----------------------------------------------------  253 (444)
Q Consensus       227 ~~~~-~~~lv~e~~~ggsL~~~l~~~~~----------------------------------------------------  253 (444)
                      ...+ .+++||||+.+++|.+++.....                                                    
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            8754 48999999999999999987543                                                    


Q ss_pred             --------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC---cccc
Q 013354          254 --------------LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC---PLSI  316 (444)
Q Consensus       254 --------------l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~---~~~~  316 (444)
                                    +++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......   ....
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence                          89999999999999999999999999999999999999999999999999986644322   2234


Q ss_pred             cCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhh
Q 013354          317 KGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQ  395 (444)
Q Consensus       317 ~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~  395 (444)
                      .||+.|+|||++.+.. ++.++|||||||++|||++ |..||.....................+..+++++.+||.+||+
T Consensus       256 ~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  334 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH  334 (359)
T ss_dssp             EECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCceeEChhhhcCCC-CCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            5788999999997655 8999999999999999998 9999987665554444333334456778899999999999999


Q ss_pred             hCCCCCcCHHHHHhC
Q 013354          396 RNPLHRPTAAWLLEH  410 (444)
Q Consensus       396 ~dP~~Rpt~~elL~h  410 (444)
                      .||++|||+.|+++|
T Consensus       335 ~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          335 GEPSQRPTFSELVEH  349 (359)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCCCHHHHHHH
Confidence            999999999999986


No 144
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.1e-47  Score=382.21  Aligned_cols=257  Identities=29%  Similarity=0.390  Sum_probs=201.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC---
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD---  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~---  230 (444)
                      .++|++.+.||+|+||.||+|+++.+++.||||++.....      ....+.+|+..+..++||||+++++++...+   
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR------FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTT------CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc------ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            3589999999999999999999999999999998864221      1234556788888899999999999986533   


Q ss_pred             ----EEEEEEeccCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH--HCCcccCCCCCCceEECC-CCcEEEE
Q 013354          231 ----KLYIYLEYVSGGSIYKILQ----DYGQLGESAIRSYTQQILSGLEYLH--AKNTVHRDIKGANILVDP-SGRVKLA  299 (444)
Q Consensus       231 ----~~~lv~e~~~ggsL~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH--~~~ivH~Dlkp~NIll~~-~~~vkL~  299 (444)
                          .+++||||+.+ +|.+.+.    ....+++..++.++.||+.||.|||  ++||+||||||+|||++. ++.+||+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence                38899999975 5554443    3456899999999999999999999  999999999999999986 8999999


Q ss_pred             eccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC-------
Q 013354          300 DFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS-------  372 (444)
Q Consensus       300 DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-------  372 (444)
                      |||++.............||+.|+|||++.+...++.++|||||||++|||++|+.||........+..+...       
T Consensus       175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            9999998776666666779999999999876666899999999999999999999999876654443332210       


Q ss_pred             -----------------------CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          373 -----------------------KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       373 -----------------------~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                             ...+.....++.++++||.+||+.||++|||+.|+|+||||++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                                   001123334678999999999999999999999999999998753


No 145
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.4e-47  Score=379.94  Aligned_cols=256  Identities=29%  Similarity=0.448  Sum_probs=212.7

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE-
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL-  232 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~-  232 (444)
                      ..+|.+.+.||+|+||.||+|+++.+|+.||||++...   .......+.+.+|+.+++.++||||+++++++...+.. 
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  117 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP---FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR  117 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST---TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccc---ccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence            46899999999999999999999999999999988642   23455667889999999999999999999999877654 


Q ss_pred             -----EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          233 -----YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       233 -----~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                           ++||||+. ++|.+++.  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          118 NFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  194 (371)
T ss_dssp             TCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred             cceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence                 99999996 68888874  35999999999999999999999999999999999999999999999999999866


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC---------------
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS---------------  372 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~---------------  372 (444)
                      ...  .....||+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+...               
T Consensus       195 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (371)
T 4exu_A          195 DAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  272 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred             ccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence            443  234568999999999987555899999999999999999999999876544433332110               


Q ss_pred             --------------CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          373 --------------KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       373 --------------~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                    .....+...++.++++||++||+.||++|||++|+|+||||++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence                          000112346799999999999999999999999999999998753


No 146
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=3.4e-47  Score=371.41  Aligned_cols=257  Identities=29%  Similarity=0.474  Sum_probs=209.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE-----
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET-----  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-----  227 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++..     ......+.+.+|+.++++++||||+++++++.     
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   83 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL-----TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ   83 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC-----CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec-----CChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence            45789999999999999999999999999999998864     23455678899999999999999999999873     


Q ss_pred             ---------cCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC-CCCcEE
Q 013354          228 ---------LDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD-PSGRVK  297 (444)
Q Consensus       228 ---------~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~vk  297 (444)
                               .....++||||+. ++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+|
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           84 LTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             CCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEE
Confidence                     3468899999997 699999975 6799999999999999999999999999999999999997 567899


Q ss_pred             EEeccccccccCCC----CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC
Q 013354          298 LADFGMAKHITGQS----CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK  373 (444)
Q Consensus       298 L~DFGla~~~~~~~----~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  373 (444)
                      |+|||++.......    ......++..|+|||++.....++.++|||||||++|||++|+.||........+..+....
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  241 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI  241 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            99999998764321    12234578999999998765558999999999999999999999998766544333322110


Q ss_pred             ----------------------------CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          374 ----------------------------ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       374 ----------------------------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                                                  ....+...++.++++||++||+.||++|||++|+|+||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence                                        0011235689999999999999999999999999999999864


No 147
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.3e-46  Score=364.20  Aligned_cols=253  Identities=29%  Similarity=0.484  Sum_probs=207.0

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc------
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL------  228 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~------  228 (444)
                      ++|++.+.||+|+||.||+|++..+++.||||++..      .....+.+.+|+.++++++||||+++++++..      
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH------TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK   79 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec------cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence            479999999999999999999999999999998862      34456788999999999999999999998754      


Q ss_pred             -------CCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEe
Q 013354          229 -------DDKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLAD  300 (444)
Q Consensus       229 -------~~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~D  300 (444)
                             ....++||||+.+++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             ------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             hhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence                   457899999999999999998644 578899999999999999999999999999999999999999999999


Q ss_pred             ccccccccCC---------------CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCC-hh
Q 013354          301 FGMAKHITGQ---------------SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEG-VP  364 (444)
Q Consensus       301 FGla~~~~~~---------------~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-~~  364 (444)
                      ||++......               .......|++.|+|||++.+...++.++|||||||++|||++   ||..... ..
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~  236 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN  236 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence            9999765422               112334589999999999766558999999999999999998   5543211 12


Q ss_pred             hhHHhcC--CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          365 AMFKIGN--SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       365 ~~~~~~~--~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ....+..  ....+.++...+.++++||++||+.||++|||+.++++||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            2222222  122334566778899999999999999999999999999999764


No 148
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=7e-47  Score=377.04  Aligned_cols=263  Identities=27%  Similarity=0.407  Sum_probs=208.2

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc------cccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD------AKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~------~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ..++|++.+.||+|+||.||+|.+.. ++.||||++......      .......+.+.+|+.++++++||||+++++++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   98 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF   98 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence            34689999999999999999998865 999999998653221      13345567899999999999999999999998


Q ss_pred             Ec-----CCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEe
Q 013354          227 TL-----DDKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLAD  300 (444)
Q Consensus       227 ~~-----~~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~D  300 (444)
                      ..     ...+++||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  177 (362)
T 3pg1_A           99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD  177 (362)
T ss_dssp             EECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             EeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence            43     347899999996 68888887543 699999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCC--------
Q 013354          301 FGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNS--------  372 (444)
Q Consensus       301 FGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~--------  372 (444)
                      ||++.............+|+.|+|||++.+...++.++|||||||++|+|++|+.||........+..+...        
T Consensus       178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  257 (362)
T 3pg1_A          178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED  257 (362)
T ss_dssp             TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHH
Confidence            999987655555555679999999999987556899999999999999999999999875543333222110        


Q ss_pred             --------------CCC--------CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          373 --------------KEL--------PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       373 --------------~~~--------~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                    ...        ......+++++.+||.+||+.||++|||+.|+|+||||+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence                          000        112345789999999999999999999999999999999763


No 149
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3.7e-47  Score=380.89  Aligned_cols=257  Identities=17%  Similarity=0.142  Sum_probs=193.7

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc--CCCCeeeEe-------ee
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL--RHPNIVRYY-------GS  225 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l--~hpnIv~l~-------~~  225 (444)
                      ..|++.+.||+|+||.||+|++..+++.||||++.....  ......+.+.+|+.+++.+  +||||++++       ++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE--NSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST--THHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc--ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            459999999999999999999999999999999975321  2344556777885544444  699988755       44


Q ss_pred             EEcC-----------------CEEEEEEeccCCCCHHHHHHhcC-CCCHHHH------HHHHHHHHHHHHHHHHCCcccC
Q 013354          226 ETLD-----------------DKLYIYLEYVSGGSIYKILQDYG-QLGESAI------RSYTQQILSGLEYLHAKNTVHR  281 (444)
Q Consensus       226 ~~~~-----------------~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~------~~i~~qi~~aL~~LH~~~ivH~  281 (444)
                      +...                 ..+|+||||+. ++|.+++...+ .+.+..+      +.++.||+.||+|||++||+||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr  218 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG  218 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence            4332                 34899999998 89999998743 3444445      6777999999999999999999


Q ss_pred             CCCCCceEECCCCcEEEEeccccccccCCCCcccccCCCcccCcccccCc-CCCChhhhHHHHHHHHHHHHcCCCCCCCC
Q 013354          282 DIKGANILVDPSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGCTVIEMATTKPPWSQY  360 (444)
Q Consensus       282 Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~  360 (444)
                      ||||+||||+.++.+||+|||+++......  ....+|+.|+|||++.+. ..++.++|||||||+||||++|+.||...
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG--PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEE--EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCc--cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999999999998764322  134477999999999751 34899999999999999999999999765


Q ss_pred             CChhh--hHH---hc--CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          361 EGVPA--MFK---IG--NSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       361 ~~~~~--~~~---~~--~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      .....  +..   ..  ...........++.++++||.+||+.||++|||+.|+|+||||++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             CcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            32211  111   11  1111112235789999999999999999999999999999999764


No 150
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=6.6e-47  Score=378.97  Aligned_cols=257  Identities=26%  Similarity=0.373  Sum_probs=218.3

Q ss_pred             CCCCCeeeeeeecccCceEEEEEE-----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGF-----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~-----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|+     +..+++.||||+++.    .........+.+|+.++++++||||+++++++
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS----SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc----ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            345689999999999999999999     445788999998852    23344556788999999999999999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---cE
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYG-------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---RV  296 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~v  296 (444)
                      ......++||||+.+++|.+++....       .+++..++.++.||+.||+|||++||+||||||+|||++.++   .+
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            99999999999999999999998753       489999999999999999999999999999999999998554   59


Q ss_pred             EEEeccccccccCC---CCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCC
Q 013354          297 KLADFGMAKHITGQ---SCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNS  372 (444)
Q Consensus       297 kL~DFGla~~~~~~---~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  372 (444)
                      ||+|||+++.....   .......+|+.|+|||++.+.. ++.++|||||||++|||++ |..||...........+...
T Consensus       224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~  302 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG  302 (367)
T ss_dssp             EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EECCCccccccccccccccCCCcCCcccEECHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999854322   2223345789999999997665 8999999999999999998 99999887766666666554


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          373 KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       373 ~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                      .. ...+..++.++.+||.+||+.||++|||+.+|+++.++.
T Consensus       303 ~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          303 GR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            43 356778999999999999999999999999999997764


No 151
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.2e-46  Score=368.34  Aligned_cols=254  Identities=25%  Similarity=0.356  Sum_probs=211.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEE-cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCC------CeeeEeee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFN-SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHP------NIVRYYGS  225 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~-~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hp------nIv~l~~~  225 (444)
                      ...+|++.+.||+|+||.||+|.+ +.+++.||+|+++.      .....+.+.+|+.+++.++|+      +|++++++
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~   85 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW   85 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEE
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec------CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecc
Confidence            456899999999999999999998 56789999998862      234456788899999888765      49999999


Q ss_pred             EEcCCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC-----------
Q 013354          226 ETLDDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP-----------  292 (444)
Q Consensus       226 ~~~~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-----------  292 (444)
                      +...+.+++||||+ +++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.           
T Consensus        86 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           86 FEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             cccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcc
Confidence            99999999999999 899999998765  5899999999999999999999999999999999999987           


Q ss_pred             --------CCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh
Q 013354          293 --------SGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP  364 (444)
Q Consensus       293 --------~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~  364 (444)
                              ++.+||+|||++......  .....||+.|+|||++.+.. ++.++|||||||++|||++|..||...+...
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                    667999999999865432  33456899999999997665 8999999999999999999999998765443


Q ss_pred             hhHHhcCCC------------------------------------------CCCCCCCCCCHHHHHHHHHHhhhCCCCCc
Q 013354          365 AMFKIGNSK------------------------------------------ELPAIPDHLSDEGKDFVRKCLQRNPLHRP  402 (444)
Q Consensus       365 ~~~~~~~~~------------------------------------------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rp  402 (444)
                      ....+....                                          .....+...++++.+||.+||+.||++||
T Consensus       242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  321 (339)
T 1z57_A          242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI  321 (339)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence            322211000                                          00011223467899999999999999999


Q ss_pred             CHHHHHhCCCCCCC
Q 013354          403 TAAWLLEHPFVGNA  416 (444)
Q Consensus       403 t~~elL~hp~~~~~  416 (444)
                      |+.|+|+||||+..
T Consensus       322 t~~ell~hp~f~~~  335 (339)
T 1z57_A          322 TLREALKHPFFDLL  335 (339)
T ss_dssp             CHHHHTTSGGGGGG
T ss_pred             CHHHHhcCHHHHHH
Confidence            99999999999864


No 152
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-46  Score=371.11  Aligned_cols=253  Identities=24%  Similarity=0.415  Sum_probs=217.8

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|++.     .+++.||+|+++.    .......+.+.+|+.++++++||||+++++++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE----EASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCT----TCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecc----ccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            34568999999999999999999987     4568999998863    23345567899999999999999999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDY------------------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRD  282 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  282 (444)
                      ...+..++||||+.+++|.+++...                        ..+++..++.++.||+.||.|||++||+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999999999874                        4689999999999999999999999999999


Q ss_pred             CCCCceEECCCCcEEEEeccccccccCCC---CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCC
Q 013354          283 IKGANILVDPSGRVKLADFGMAKHITGQS---CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWS  358 (444)
Q Consensus       283 lkp~NIll~~~~~vkL~DFGla~~~~~~~---~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~  358 (444)
                      |||+|||++.++.+||+|||++.......   ......+|+.|+|||++.+.. ++.++|||||||++|||++ |..||.
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCC-cCcccccHHHHHHHHHHHhcCCCcCC
Confidence            99999999999999999999998654332   122345788999999997665 8999999999999999999 999998


Q ss_pred             CCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          359 QYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ..........+.... .+.++..++.++.+||++||+.||++|||+.+++++
T Consensus       279 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          279 GMAHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             TSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCChHHHHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            776655555555443 346778899999999999999999999999998874


No 153
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.8e-46  Score=373.14  Aligned_cols=256  Identities=28%  Similarity=0.445  Sum_probs=213.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE--
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK--  231 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~--  231 (444)
                      ..+|.+.+.||+|+||.||+|+++.+|+.||||++...   .......+.+.+|+.+++.++||||+++++++...+.  
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   99 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP---FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR   99 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESST---TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccc---ccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence            35799999999999999999999999999999988642   2345556788999999999999999999999887653  


Q ss_pred             ----EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          232 ----LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       232 ----~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                          +++||||+. ++|.+++..  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       100 ~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          100 NFYDFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             GCCCCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             cceeEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence                499999996 688887753  5999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcC----------------
Q 013354          308 TGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGN----------------  371 (444)
Q Consensus       308 ~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~----------------  371 (444)
                      ...  .....+|+.|+|||++.+...++.++|||||||++|||++|+.||...+....+..+..                
T Consensus       177 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          177 DAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             CCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence            433  23456899999999987755589999999999999999999999987654333222110                


Q ss_pred             -------------CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          372 -------------SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       372 -------------~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                                   ......+...++.++++||.+||+.||++|||+.|+|+||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence                         1122334567899999999999999999999999999999998653


No 154
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.1e-46  Score=365.45  Aligned_cols=253  Identities=25%  Similarity=0.414  Sum_probs=218.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|.+.     .+++.||+|++..    .......+.+.+|+.+++.++||||+++++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE----NASPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCT----TCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccC----CCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            34578999999999999999999883     4568999998863    23455567899999999999999999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCcccCC
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYGQ------------------------LGESAIRSYTQQILSGLEYLHAKNTVHRD  282 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~~------------------------l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  282 (444)
                      ..++..++||||+.+++|.+++.....                        +++..++.++.||+.||.|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            999999999999999999999987543                        88999999999999999999999999999


Q ss_pred             CCCCceEECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCC
Q 013354          283 IKGANILVDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWS  358 (444)
Q Consensus       283 lkp~NIll~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~  358 (444)
                      |||+|||++.++.+||+|||++........   .....+++.|+|||++.+.. ++.++|||||||++|||++ |..||.
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~  254 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYP  254 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC-cCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999987644332   22344778899999997655 8999999999999999999 999998


Q ss_pred             CCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          359 QYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ..........+.... ....+..++.++.+||.+||+.||++|||+.+++++
T Consensus       255 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          255 GIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             TCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHhhcCC-cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            766655555554433 346678899999999999999999999999999875


No 155
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=7.7e-47  Score=379.73  Aligned_cols=252  Identities=25%  Similarity=0.426  Sum_probs=217.8

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|+++.+++.||||+++.    .......+.+.+|+.+|++++||||+++++++..++.
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE----TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCT----TSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccc----cCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            345689999999999999999999998999999998763    2334555678899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          232 LYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      +++||||+.+++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            999999999999999998754 5999999999999999999999999999999999999999999999999999865432


Q ss_pred             CCc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          311 SCP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       311 ~~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ...   ....+++.|+|||++.... ++.++|||||||++|||++ |..||...........+...... ..+..+++++
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l  344 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-PCPELCPDAV  344 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-CCCTTCCHHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHH
Confidence            211   1122567899999997665 8999999999999999998 99999887766655555554443 5678899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHh
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .+||.+||+.||++|||+.+|++
T Consensus       345 ~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          345 FRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCCchhCcCHHHHHH
Confidence            99999999999999999999875


No 156
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-47  Score=371.36  Aligned_cols=257  Identities=26%  Similarity=0.473  Sum_probs=208.0

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeeccccc-ccHHHHHHHHHHHHHHHcc----CCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDA-KSKESAQQLGQEIALLSRL----RHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~-~~~~~~~~~~~Ei~~l~~l----~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|++..+++.||+|++....... ........+.+|+.++.++    +|+||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            34568999999999999999999999999999999986432211 1112234566789999988    899999999999


Q ss_pred             EcCCEEEEEEec-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC-CCCcEEEEecccc
Q 013354          227 TLDDKLYIYLEY-VSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD-PSGRVKLADFGMA  304 (444)
Q Consensus       227 ~~~~~~~lv~e~-~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~vkL~DFGla  304 (444)
                      ...+..++|||+ +.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            998999999999 78999999999888899999999999999999999999999999999999998 7899999999999


Q ss_pred             ccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          305 KHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       305 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      ....... .....|+..|+|||++.+....+.++|||||||++|||++|+.||....   ....   .  ...++..++.
T Consensus       188 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~---~--~~~~~~~~~~  258 (312)
T 2iwi_A          188 ALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---EILE---A--ELHFPAHVSP  258 (312)
T ss_dssp             EECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---HHHH---T--CCCCCTTSCH
T ss_pred             hhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---HHhh---h--ccCCcccCCH
Confidence            8765433 3445699999999998766644669999999999999999999996421   1111   1  1245678999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ++++||.+||+.||++|||++|+++||||+...
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            999999999999999999999999999999753


No 157
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.2e-46  Score=357.91  Aligned_cols=249  Identities=23%  Similarity=0.408  Sum_probs=214.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|++.. ++.||+|++....   ..   .+.+.+|+.++++++||||+++++++..++..
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   80 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA---MS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   80 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTS---BC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             ChhhceeeheecCCCccEEEEEEecC-CCeEEEEEecccc---cC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCce
Confidence            34689999999999999999999874 7889999986321   11   24688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  160 (269)
T 4hcu_A           81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  160 (269)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence            9999999999999999764 458999999999999999999999999999999999999999999999999998664432


Q ss_pred             --CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          312 --CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       312 --~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                        ......+++.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..++.++.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  238 (269)
T 4hcu_A          161 YTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLASTHVYQ  238 (269)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CCCCTTSCHHHHH
T ss_pred             cccccCcccccccCCHHHhcCCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc-CCCCCcCCHHHHH
Confidence              122344678899999997665 8999999999999999999 9999988766666655554433 3567778999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ||.+||+.||++|||+.|+++|
T Consensus       239 li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          239 IMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999875


No 158
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1.5e-46  Score=372.27  Aligned_cols=259  Identities=29%  Similarity=0.444  Sum_probs=218.7

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeeccccccc------------HHHHHHHHHHHHHHHccCCCCeee
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKS------------KESAQQLGQEIALLSRLRHPNIVR  221 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~------------~~~~~~~~~Ei~~l~~l~hpnIv~  221 (444)
                      ..+|++.+.||+|+||.||+|++  +++.||+|++.........            ....+.+.+|+.++++++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999998  7999999998642111000            011267889999999999999999


Q ss_pred             EeeeEEcCCEEEEEEeccCCCCHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCCCceEECC
Q 013354          222 YYGSETLDDKLYIYLEYVSGGSIYKI------LQD--YGQLGESAIRSYTQQILSGLEYLHA-KNTVHRDIKGANILVDP  292 (444)
Q Consensus       222 l~~~~~~~~~~~lv~e~~~ggsL~~~------l~~--~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~  292 (444)
                      +++++...+..++||||+.+++|.++      +.+  ...+++..++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK  187 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence            99999999999999999999999998      665  4679999999999999999999999 99999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCCh-hhhHHHHHHHHHHHHcCCCCCCCCCC-hhhhHHhc
Q 013354          293 SGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNL-AVDIWSLGCTVIEMATTKPPWSQYEG-VPAMFKIG  370 (444)
Q Consensus       293 ~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~-~sDvwSlGvil~elltG~~Pf~~~~~-~~~~~~~~  370 (444)
                      ++.+||+|||++...... ......|++.|+|||++.+...++. ++|||||||++|||++|+.||..... ......+.
T Consensus       188 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~  266 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR  266 (348)
T ss_dssp             TSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHT
T ss_pred             CCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh
Confidence            999999999999876543 3344569999999999987644666 99999999999999999999987665 44444443


Q ss_pred             CCCCCCCCC-------------------CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          371 NSKELPAIP-------------------DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       371 ~~~~~~~~~-------------------~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      ....  .++                   ..++.++.+||.+||+.||++|||+.|+++||||++..
T Consensus       267 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          267 TKNI--EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             SCCC--CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccCc--CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            3322  222                   56899999999999999999999999999999998753


No 159
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2e-46  Score=360.66  Aligned_cols=250  Identities=24%  Similarity=0.394  Sum_probs=213.3

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|.+. ++..||+|++.....   .   .+.+.+|+.++++++|+||+++++++...+.
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   93 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---S---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP   93 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB---C---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC---C---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCC
Confidence            45578999999999999999999876 578899999863211   1   2467899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      .++||||+.+++|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            9999999999999999987 457999999999999999999999999999999999999999999999999999866443


Q ss_pred             C--CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHH
Q 013354          311 S--CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGK  387 (444)
Q Consensus       311 ~--~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~  387 (444)
                      .  ......+|+.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..+++++.
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  251 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYRPHLASEKVY  251 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-CCCCTTCCHHHH
T ss_pred             ccccccCCccCcccCCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC-CCCCCcCCHHHH
Confidence            2  122334678899999997665 8999999999999999998 9999988776666666554433 355778899999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +||.+||+.||++|||+.++++|
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          252 TIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHH
Confidence            99999999999999999999875


No 160
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3.3e-46  Score=364.82  Aligned_cols=262  Identities=27%  Similarity=0.446  Sum_probs=215.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC--CCCeeeEeeeEEcC
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR--HPNIVRYYGSETLD  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~--hpnIv~l~~~~~~~  229 (444)
                      ..+.+|++.+.||+|+||.||+|.+. +++.||+|++....   ......+.+.+|+.++++++  |+||+++++++..+
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS---CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc---ccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence            44568999999999999999999886 48999999987422   33556678899999999997  59999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +.+++||| +.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus       101 ~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          101 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  178 (313)
T ss_dssp             SEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---
T ss_pred             CEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccC
Confidence            99999999 45889999999888899999999999999999999999999999999999996 48899999999987654


Q ss_pred             CCC---cccccCCCcccCcccccCc----------CCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCC
Q 013354          310 QSC---PLSIKGSPYWMAPEVIKNS----------NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKEL  375 (444)
Q Consensus       310 ~~~---~~~~~gt~~y~APE~~~~~----------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~  375 (444)
                      ...   .....|++.|+|||++.+.          ..++.++|||||||++|||++|+.||...... ..+..+......
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  258 (313)
T 3cek_A          179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE  258 (313)
T ss_dssp             -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred             ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc
Confidence            332   1234589999999998651          24789999999999999999999999765433 233333333334


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCCCC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAAPL  419 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~~~  419 (444)
                      ..++...+.++.+||.+||+.||++||++.|+|+||||+.....
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence            45677789999999999999999999999999999999876443


No 161
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3e-46  Score=356.91  Aligned_cols=252  Identities=27%  Similarity=0.523  Sum_probs=206.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|+++..... ......+.+.+|+.+++.++||||+++++++..++..
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDE-DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcc-cHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            3568999999999999999999875  889999988642211 2233356788999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCCCceEECC--------CCcEEEEec
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKN---TVHRDIKGANILVDP--------SGRVKLADF  301 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~--------~~~vkL~DF  301 (444)
                      ++||||+.+++|.+++.. ..+++..++.++.||+.||.|||++|   |+||||||+|||++.        ++.+||+||
T Consensus        82 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            999999999999999864 58999999999999999999999999   899999999999986        678999999


Q ss_pred             cccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCC
Q 013354          302 GMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDH  381 (444)
Q Consensus       302 Gla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  381 (444)
                      |++........ ....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...........+.........+..
T Consensus       161 g~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  238 (271)
T 3dtc_A          161 GLAREWHRTTK-MSAAGAYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST  238 (271)
T ss_dssp             CC--------------CCGGGSCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTT
T ss_pred             Ccccccccccc-cCCCCccceeCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcc
Confidence            99987654332 3456899999999997665 899999999999999999999999887766666666555555677889


Q ss_pred             CCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          382 LSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       382 ~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +++++.+||.+||+.||++|||+.|++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            99999999999999999999999999874


No 162
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6.6e-47  Score=380.68  Aligned_cols=252  Identities=27%  Similarity=0.389  Sum_probs=206.3

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC--------CCCeeeEeee
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR--------HPNIVRYYGS  225 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------hpnIv~l~~~  225 (444)
                      ..+|++.+.||+|+||+||+|++..+++.||||++..      .....+.+.+|+.+++.++        |+||++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~  109 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS------AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD  109 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec------CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence            4689999999999999999999999999999999862      2445567889999999985        7889999999


Q ss_pred             EE----cCCEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCC----
Q 013354          226 ET----LDDKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSG----  294 (444)
Q Consensus       226 ~~----~~~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~----  294 (444)
                      +.    ....+++||||+ +++|.+++.+.  ..+++..++.++.||+.||+|||++ ||+||||||+||||+.++    
T Consensus       110 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~  188 (397)
T 1wak_A          110 FKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR  188 (397)
T ss_dssp             EEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHH
T ss_pred             eeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhh
Confidence            87    556899999999 66776666554  4699999999999999999999999 999999999999998775    


Q ss_pred             ---------------------------------------------cEEEEeccccccccCCCCcccccCCCcccCccccc
Q 013354          295 ---------------------------------------------RVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIK  329 (444)
Q Consensus       295 ---------------------------------------------~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~  329 (444)
                                                                   .+||+|||++......  .....||+.|+|||++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~  266 (397)
T 1wak_A          189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLI  266 (397)
T ss_dssp             HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHH
T ss_pred             hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhc
Confidence                                                         7999999999876433  33456899999999998


Q ss_pred             CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh------hhHHhc---C-------------------CCC---C---
Q 013354          330 NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP------AMFKIG---N-------------------SKE---L---  375 (444)
Q Consensus       330 ~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~------~~~~~~---~-------------------~~~---~---  375 (444)
                      +.. ++.++|||||||+||||++|+.||.......      .+..+.   .                   ...   .   
T Consensus       267 ~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (397)
T 1wak_A          267 GSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL  345 (397)
T ss_dssp             TSC-CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred             CCC-CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence            766 8999999999999999999999997644321      111000   0                   000   0   


Q ss_pred             ------------CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          376 ------------PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       376 ------------~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                                  ...+..++.++++||.+||+.||++|||++|+|+||||++
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                        0112334577899999999999999999999999999964


No 163
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-45  Score=371.34  Aligned_cols=253  Identities=28%  Similarity=0.449  Sum_probs=218.3

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcC-------CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEe
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSE-------SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYY  223 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~-------~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~  223 (444)
                      ...++|++.+.||+|+||.||+|++..       ++..||+|+++.    .......+.+.+|+.+++++ +||||++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS----DATEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecc----ccCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            345789999999999999999999753       335799998863    23455567899999999999 999999999


Q ss_pred             eeEEcCCEEEEEEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCc
Q 013354          224 GSETLDDKLYIYLEYVSGGSIYKILQDYG----------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGAN  287 (444)
Q Consensus       224 ~~~~~~~~~~lv~e~~~ggsL~~~l~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  287 (444)
                      +++..++..++||||+.+++|.+++....                .+++..++.++.||+.||+|||++||+||||||+|
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            99999999999999999999999998754                48999999999999999999999999999999999


Q ss_pred             eEECCCCcEEEEeccccccccCCC---CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCCh
Q 013354          288 ILVDPSGRVKLADFGMAKHITGQS---CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGV  363 (444)
Q Consensus       288 Ill~~~~~vkL~DFGla~~~~~~~---~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~  363 (444)
                      |||+.++.+||+|||+++......   ......+|+.|+|||++.+.. ++.++|||||||++|||++ |..||......
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~  300 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE  300 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999998764432   223345788999999998765 8999999999999999999 99999877655


Q ss_pred             hhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          364 PAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .....+.... ....+..++.++.+||.+||+.||++|||+.|++++
T Consensus       301 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          301 ELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5555554443 345678899999999999999999999999999876


No 164
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1e-46  Score=382.20  Aligned_cols=255  Identities=29%  Similarity=0.472  Sum_probs=192.2

Q ss_pred             CCeee-eeeecccCceEEEEEEEc--CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE--cC
Q 013354          155 SRWKK-GRLLGRGTFGHVYLGFNS--ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET--LD  229 (444)
Q Consensus       155 ~~~~~-~~~LG~G~fg~Vy~a~~~--~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--~~  229 (444)
                      +.|++ +++||+|+||+||+|+++  .+++.||||++....   .    ...+.+|+.+|+.++||||+++++++.  .+
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   92 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---I----SMSACREIALLRELKHPNVISLQKVFLSHAD   92 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---C----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---C----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence            34666 568999999999999976  568999999885321   1    135778999999999999999999985  47


Q ss_pred             CEEEEEEeccCCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE----CCCCcE
Q 013354          230 DKLYIYLEYVSGGSIYKILQDY---------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV----DPSGRV  296 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~v  296 (444)
                      ..+++||||+. ++|.+++...         ..+++..++.++.||+.||+|||++||+||||||+||||    +.++.+
T Consensus        93 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           93 RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            78999999995 5888887632         149999999999999999999999999999999999999    677899


Q ss_pred             EEEeccccccccCCC----CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh---------
Q 013354          297 KLADFGMAKHITGQS----CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV---------  363 (444)
Q Consensus       297 kL~DFGla~~~~~~~----~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---------  363 (444)
                      ||+|||+++.+....    ......||+.|+|||++.+...++.++|||||||+||||++|+.||......         
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence            999999998764432    2234568999999999987666899999999999999999999999654321         


Q ss_pred             hhhHHhcCCCCCC------------------------------------CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHH
Q 013354          364 PAMFKIGNSKELP------------------------------------AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWL  407 (444)
Q Consensus       364 ~~~~~~~~~~~~~------------------------------------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~el  407 (444)
                      ..+..+......+                                    ......+.++.+||.+||+.||++|||++|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            1111111000000                                    0111237789999999999999999999999


Q ss_pred             HhCCCCCCCC
Q 013354          408 LEHPFVGNAA  417 (444)
Q Consensus       408 L~hp~~~~~~  417 (444)
                      |+||||.+..
T Consensus       332 L~hp~f~~~~  341 (405)
T 3rgf_A          332 MQDPYFLEDP  341 (405)
T ss_dssp             HTSGGGTSSS
T ss_pred             hcChhhccCC
Confidence            9999998753


No 165
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=3.8e-46  Score=366.56  Aligned_cols=258  Identities=28%  Similarity=0.475  Sum_probs=192.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHH-HHHccCCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIA-LLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~-~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ..++|++.+.||+|+||.||+|.++.+++.||||++...    .......++.+|+. +++.++||||+++++++..++.
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST----VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD   95 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC----CCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc----cCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc
Confidence            346899999999999999999999999999999998742    22333345555555 7788899999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          232 LYIYLEYVSGGSIYKILQD-----YGQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      .++||||+.+ +|.+++..     ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus        96 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           96 CWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             eEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999999974 88888864     45799999999999999999999999 99999999999999999999999999998


Q ss_pred             cccCCCCcccccCCCcccCccccc---CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-hhhHHhcCCCCCCCC---
Q 013354          306 HITGQSCPLSIKGSPYWMAPEVIK---NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-PAMFKIGNSKELPAI---  378 (444)
Q Consensus       306 ~~~~~~~~~~~~gt~~y~APE~~~---~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~---  378 (444)
                      ............||+.|+|||++.   ....++.++|||||||++|||++|+.||...... ..+..+.... .+.+   
T Consensus       175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~  253 (327)
T 3aln_A          175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD-PPQLSNS  253 (327)
T ss_dssp             C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSC-CCCCCCC
T ss_pred             ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCC-CCCCCCc
Confidence            775554444456999999999984   2333789999999999999999999999764432 2222222211 1122   


Q ss_pred             -CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          379 -PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       379 -~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                       ...++.++.+||.+||+.||++|||+.++++||||.+.
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence             24689999999999999999999999999999999753


No 166
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=3.2e-46  Score=367.73  Aligned_cols=251  Identities=25%  Similarity=0.404  Sum_probs=206.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEE----EEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMC----AMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~v----aiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ...+|++.+.||+|+||+||+|++..+++.+    |+|.++    ........+.+.+|+.++++++||||+++++++..
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR----EATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecc----cccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            3468999999999999999999998888766    555443    12233445788999999999999999999999987


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      .. .++|+||+.+++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            65 78899999999999999874 56999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          308 TGQSCP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       308 ~~~~~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      ......   ....+|+.|+|||++.+.. ++.++|||||||++|||++ |+.||...........+..... ...+..++
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~  245 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPICT  245 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-CCCCTTBC
T ss_pred             cCCcccccccCCCccccccChHHhccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC-CCCCccCC
Confidence            544322   2234678999999998665 8999999999999999999 9999987766555555544443 35677899


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .++.+||.+||+.||++||++.+++++
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          246 IDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999999999875


No 167
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=4.7e-46  Score=358.12  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=205.4

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCC---CcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSES---GEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~---g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ....+|++.+.||+|+||.||+|++..+   +..||+|++..    .......+.+.+|+.++++++||||+++++++. 
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   86 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN----CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   86 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT----TTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccc----cCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence            4457899999999999999999998654   45689997652    234556678999999999999999999999875 


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      ++..++||||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccccc
Confidence            456899999999999999998754 6999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCc--ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          308 TGQSCP--LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       308 ~~~~~~--~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      ......  ....+++.|+|||++.... ++.++|||||||++|||++ |..||...........+..... ..++..++.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~  244 (281)
T 1mp8_A          167 EDSTYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER-LPMPPNCPP  244 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-CCCCTTCCH
T ss_pred             CcccccccccCCCcccccChhhcccCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCC-CCCCCCCCH
Confidence            543321  2234678899999997655 8999999999999999997 9999988776666666655443 356788999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ++.+||.+||+.||++|||+.|++++
T Consensus       245 ~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          245 TLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999998864


No 168
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.8e-46  Score=363.43  Aligned_cols=254  Identities=28%  Similarity=0.444  Sum_probs=216.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEE-----cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeee
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFN-----SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGS  225 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~-----~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~  225 (444)
                      ....+|++.+.||+|+||.||+|++     ..+++.||+|++...    ......+.+.+|+.+++++ +||||++++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS----AHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc----hhHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            3456899999999999999999985     456789999988632    2334557889999999999 99999999999


Q ss_pred             EEcCCEEEEEEeccCCCCHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCc
Q 013354          226 ETLDDKLYIYLEYVSGGSIYKILQDYG------------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGAN  287 (444)
Q Consensus       226 ~~~~~~~~lv~e~~~ggsL~~~l~~~~------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  287 (444)
                      +...+..++||||+.+++|.+++....                  .+++..++.++.||+.||.|||++||+||||||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            999999999999999999999998754                  38999999999999999999999999999999999


Q ss_pred             eEECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCCh
Q 013354          288 ILVDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGV  363 (444)
Q Consensus       288 Ill~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~  363 (444)
                      ||++.++.+||+|||++........   .....+++.|+|||++.+.. ++.++|||||||++|||++ |+.||......
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            9999999999999999987654432   12344678899999987665 8999999999999999999 99999876655


Q ss_pred             hhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          364 PAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ...............+..++.++.+||.+||+.||++|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          255 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            54444333333345567899999999999999999999999999874


No 169
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=3.9e-46  Score=355.76  Aligned_cols=249  Identities=28%  Similarity=0.433  Sum_probs=214.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|.++ ++..||+|+++....      ..+.+.+|+.++++++||||+++++++..+...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence            4568999999999999999999876 477899999864221      124688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            99999999999999998754 49999999999999999999999999999999999999999999999999998765433


Q ss_pred             C--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          312 C--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       312 ~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                      .  .....+++.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..+++++.+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  236 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR-LYRPHLASDTIYQ  236 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-CCCCTTSCHHHHH
T ss_pred             hhcccCCCcCcccCCHHHHhccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC-CCCCCcChHHHHH
Confidence            2  22334677899999997655 8899999999999999999 9999988776666655554443 3556778999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ||.+||+.||++|||+.|++++
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          237 IMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999986


No 170
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-46  Score=369.48  Aligned_cols=254  Identities=25%  Similarity=0.391  Sum_probs=214.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~  226 (444)
                      ..++|++.+.||+|+||.||+|++.     .++..||+|++...    ......+.+.+|+.+++++ +||||+++++++
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK----ADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccc----cCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            4568999999999999999999973     45678999998632    2233456888999999999 899999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYG-----------------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDI  283 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~-----------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  283 (444)
                      ...+..++||||+.+++|.+++....                       .+++..++.++.||+.||.|||++||+||||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999999998653                       2789999999999999999999999999999


Q ss_pred             CCCceEECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCC
Q 013354          284 KGANILVDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQ  359 (444)
Q Consensus       284 kp~NIll~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~  359 (444)
                      ||+|||++.++.+||+|||++........   .....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||..
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~  277 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG  277 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC-CChhHhHHHHHHHHHHHHcCCCCCccc
Confidence            99999999999999999999986644332   12344778999999997665 8999999999999999998 9999988


Q ss_pred             CCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCC
Q 013354          360 YEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHP  411 (444)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp  411 (444)
                      ...................+..++.++.+||.+||+.||++|||+.++++|-
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          278 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            7655555444444444566788999999999999999999999999999874


No 171
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.1e-45  Score=354.23  Aligned_cols=253  Identities=25%  Similarity=0.443  Sum_probs=213.0

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHH---HHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKES---AQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~---~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ....+|++.+.||+|+||.||+|++..+++.||+|++...... .....   .+.+.+|+.++++++||||+++++++..
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE-GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTT-CCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccc-cchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            4457899999999999999999999999999999988653322 12222   2678899999999999999999999876


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEECCCCc-----EEEEe
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVDPSGR-----VKLAD  300 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~-----vkL~D  300 (444)
                      ..  ++||||+.+++|.+++.+. ..+++..++.++.||+.||+|||++|  |+||||||+|||++.++.     +||+|
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence            65  6999999999999988764 46999999999999999999999999  999999999999988776     99999


Q ss_pred             ccccccccCCCCcccccCCCcccCcccccC-cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh--hHHhcCCCCCCC
Q 013354          301 FGMAKHITGQSCPLSIKGSPYWMAPEVIKN-SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA--MFKIGNSKELPA  377 (444)
Q Consensus       301 FGla~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~~~~~~~  377 (444)
                      ||+++....  ......||+.|+|||++.. ...++.++|||||||++|||++|+.||........  ...+......+.
T Consensus       173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 4f0f_A          173 FGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT  250 (287)
T ss_dssp             CTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred             CCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence            999975433  2334569999999999842 23378999999999999999999999987654433  333444445567


Q ss_pred             CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          378 IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       378 ~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ++..+++++.+||.+||+.||++|||+.|+++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            78899999999999999999999999999986


No 172
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2e-46  Score=368.10  Aligned_cols=257  Identities=26%  Similarity=0.429  Sum_probs=217.6

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc-cHHHHHHHHHHHHHHHccC--CCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK-SKESAQQLGQEIALLSRLR--HPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~-~~~~~~~~~~Ei~~l~~l~--hpnIv~l~~~~~~  228 (444)
                      ...++|++.+.||+|+||.||+|++..+++.||||++........ .....+.+.+|+.++++++  |+||+++++++..
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            345689999999999999999999999999999999875322110 0012235667999999996  5999999999999


Q ss_pred             CCEEEEEEeccCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC-CCCcEEEEecccccc
Q 013354          229 DDKLYIYLEYVSG-GSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD-PSGRVKLADFGMAKH  306 (444)
Q Consensus       229 ~~~~~lv~e~~~g-gsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-~~~~vkL~DFGla~~  306 (444)
                      .+..++|||++.+ ++|.+++.+...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence            9999999999976 89999999888999999999999999999999999999999999999998 778999999999987


Q ss_pred             ccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          307 ITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       307 ~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      .... ......||+.|+|||++.+...++.++|||||||++|||++|+.||....   ...   ...  ..++..++.++
T Consensus       200 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---~~~---~~~--~~~~~~~~~~~  270 (320)
T 3a99_A          200 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---EII---RGQ--VFFRQRVSSEC  270 (320)
T ss_dssp             CCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---HHH---HCC--CCCSSCCCHHH
T ss_pred             cccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---hhh---ccc--ccccccCCHHH
Confidence            6543 23345699999999998766645789999999999999999999996421   111   111  23567789999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                      .+||++||+.||++|||++|+++||||++..
T Consensus       271 ~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            9999999999999999999999999999864


No 173
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=392.94  Aligned_cols=249  Identities=25%  Similarity=0.376  Sum_probs=208.6

Q ss_pred             CCCeeeee-eecccCceEEEEEEEcC--CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          154 GSRWKKGR-LLGRGTFGHVYLGFNSE--SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       154 ~~~~~~~~-~LG~G~fg~Vy~a~~~~--~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      ..++.+.+ .||+|+||.||+|.++.  ++..||||+++..    ......+.+.+|+.+|++++||||+++++++.. +
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC----CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC----CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence            34566665 89999999999998763  4667999988642    122345678899999999999999999999876 5


Q ss_pred             EEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .+++||||+.+++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.+..
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA  488 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred             CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence            599999999999999999754 4599999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCcc----cccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          310 QSCPL----SIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       310 ~~~~~----~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      .....    ...+++.|+|||++.... ++.++|||||||+||||++ |+.||......+....+.....+ ..+..++.
T Consensus       489 ~~~~~~~~~~~~~~~~y~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~-~~p~~~~~  566 (613)
T 2ozo_A          489 DDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-ECPPECPP  566 (613)
T ss_dssp             -------------CCTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC-CCCTTCCH
T ss_pred             CCceeeeccCCCCccceeCHhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-CCCCcCCH
Confidence            33221    223568899999997665 8999999999999999998 99999988887777777666544 56788999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ++.+||.+||+.||++||++.+|++
T Consensus       567 ~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          567 ELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999998743


No 174
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=5.2e-46  Score=365.78  Aligned_cols=253  Identities=26%  Similarity=0.430  Sum_probs=213.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEE--EEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMC--AMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~v--aiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~  228 (444)
                      ...++|++.+.||+|+||.||+|+++.++..+  |+|.+...    ......+.+.+|+.+++++ +||||+++++++..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~   97 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH   97 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc----cchHHHHHHHHHHHHHHhccCCCchhhhceeeee
Confidence            44568999999999999999999999888865  88887632    2334456788999999999 89999999999999


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYG----------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP  292 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  292 (444)
                      .+..++||||+++++|.+++.+..                .+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~  177 (327)
T 1fvr_A           98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  177 (327)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC
Confidence            999999999999999999998754                6999999999999999999999999999999999999999


Q ss_pred             CCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcC
Q 013354          293 SGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGN  371 (444)
Q Consensus       293 ~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  371 (444)
                      ++.+||+|||+++............+++.|+|||++.... ++.++|||||||++|||++ |..||...........+..
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~  256 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  256 (327)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             CCeEEEcccCcCccccccccccCCCCCccccChhhhcccc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc
Confidence            9999999999997544333333445788999999997655 8999999999999999998 9999988766555555554


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          372 SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       372 ~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ... ...+..++.++.+||.+||+.||++|||+.|++++
T Consensus       257 ~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          257 GYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TCC-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC-CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            433 35677899999999999999999999999998876


No 175
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=8.5e-46  Score=356.93  Aligned_cols=250  Identities=26%  Similarity=0.450  Sum_probs=217.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.+.||+|+||.||+|.++.+++.||+|++..      .....+.+.+|+.++++++|+||+++++++..++.
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   83 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   83 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS------CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            456789999999999999999999999999999998863      12234678899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .++||||+.+++|.+++.+..  .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            999999999999999998743  499999999999999999999999999999999999999999999999999987654


Q ss_pred             CCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          310 QSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       310 ~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ...  .....+++.|+|||++.+.. ++.++||||||+++|+|++ |..||...+.......+..... ...+..+++++
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  241 (288)
T 3kfa_A          164 DTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPEGCPEKV  241 (288)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-CCCCTTCCHHH
T ss_pred             CccccccCCccccCcCChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC-CCCCCCCCHHH
Confidence            432  22344678899999997665 8999999999999999999 9999988766555555544333 35678899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHh
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .+||++||+.||++|||+.++++
T Consensus       242 ~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          242 YELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhCCChhhCcCHHHHHH
Confidence            99999999999999999999876


No 176
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=9.7e-46  Score=361.34  Aligned_cols=258  Identities=28%  Similarity=0.464  Sum_probs=197.9

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|+++.+++.||||++....   ......+.+.++..+++.++||||+++++++..++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS---CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            457999999999999999999999999999999987422   22333445556666788899999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          234 IYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      +||||+ ++.+..+... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.......
T Consensus       101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence            999999 6677766654 45799999999999999999999996 99999999999999999999999999998765555


Q ss_pred             CcccccCCCcccCcccccC----cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh-hhHHhcCCCCCCCCC--CCCCH
Q 013354          312 CPLSIKGSPYWMAPEVIKN----SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP-AMFKIGNSKELPAIP--DHLSD  384 (444)
Q Consensus       312 ~~~~~~gt~~y~APE~~~~----~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~~~~~~~~~--~~~s~  384 (444)
                      ......+++.|+|||++..    ...++.++|||||||++|||++|+.||....... .+..+.... .+.++  ..++.
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  258 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PPLLPGHMGFSG  258 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC-CCCCCSSSCCCH
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC-CCCCCccCCCCH
Confidence            4455669999999999852    3347889999999999999999999998754432 233332222 22223  45899


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ++.+||.+||+.||++||+++|+++||||++.
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            99999999999999999999999999999854


No 177
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.4e-45  Score=351.50  Aligned_cols=249  Identities=16%  Similarity=0.320  Sum_probs=215.8

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC--
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD--  229 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--  229 (444)
                      ...++|++.+.||+|+||.||+|++.  ++.||+|+++..   .......+.+.+|+.++++++||||+++++++...  
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVR---DWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCT---TCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccc---ccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC
Confidence            34568999999999999999999885  889999998752   23345567899999999999999999999999886  


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEECCCCcEEEEeccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      ...++||||+++++|.+++.+..  .+++..++.++.||+.||+|||+++  |+||||||+|||++.++.++|+|||++.
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            78899999999999999998765  4899999999999999999999999  9999999999999999999999999876


Q ss_pred             cccCCCCcccccCCCcccCcccccCcCC--CChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          306 HITGQSCPLSIKGSPYWMAPEVIKNSNG--CNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       306 ~~~~~~~~~~~~gt~~y~APE~~~~~~~--~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      ....    ....||+.|+|||++.+...  ++.++|||||||++|||++|+.||...........+......+.++..++
T Consensus       162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3kmu_A          162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS  237 (271)
T ss_dssp             TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred             eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence            5332    23458999999999976541  34489999999999999999999988776666566555555567888999


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .++.+||.+||+.||++|||++|+++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999886


No 178
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=3.1e-45  Score=357.83  Aligned_cols=255  Identities=29%  Similarity=0.458  Sum_probs=208.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|++.   ..+|+|+++...   ......+.+.+|+.++++++|+||+++++++. ++.
T Consensus        33 i~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~  105 (307)
T 3lb7_A           33 IEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD---PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDN  105 (307)
T ss_dssp             CCTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             ecccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCC---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCc
Confidence            44578999999999999999999764   358999876532   34556678999999999999999999999765 455


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC-
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG-  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~-  309 (444)
                      .++||||+.+++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~  185 (307)
T 3lb7_A          106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred             EEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence            8999999999999999974 45699999999999999999999999999999999999999999999999999975432 


Q ss_pred             --CCCcccccCCCcccCccccc--CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHh-cCC---CCCCCCCCC
Q 013354          310 --QSCPLSIKGSPYWMAPEVIK--NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKI-GNS---KELPAIPDH  381 (444)
Q Consensus       310 --~~~~~~~~gt~~y~APE~~~--~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~-~~~---~~~~~~~~~  381 (444)
                        ........||+.|+|||++.  ....++.++|||||||++|||++|+.||............ ...   .....+...
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (307)
T 3lb7_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN  265 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSS
T ss_pred             cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcC
Confidence              12223456999999999986  2333789999999999999999999999876665543322 222   222345567


Q ss_pred             CCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCC
Q 013354          382 LSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFV  413 (444)
Q Consensus       382 ~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~  413 (444)
                      +++++.+||.+||+.||++||++.|++++.+.
T Consensus       266 ~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          266 CPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence            89999999999999999999999999987653


No 179
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=7.6e-46  Score=372.95  Aligned_cols=254  Identities=27%  Similarity=0.438  Sum_probs=208.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CC-----CeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HP-----NIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hp-----nIv~l~~~~  226 (444)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++.      .......+.+|+.+++.++ |+     +|+++++++
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN------KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec------cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            34689999999999999999999999999999999862      3344567778888888875 44     499999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HCCcccCCCCCCceEEC--CCCcEEEEe
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLH--AKNTVHRDIKGANILVD--PSGRVKLAD  300 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH--~~~ivH~Dlkp~NIll~--~~~~vkL~D  300 (444)
                      ...+.+++||||+. ++|.+++...  ..+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||+|
T Consensus       126 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          126 MFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             EETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             ccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            99999999999995 5999999875  35999999999999999999999  56999999999999995  467899999


Q ss_pred             ccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCC----
Q 013354          301 FGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELP----  376 (444)
Q Consensus       301 FGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~----  376 (444)
                      ||+++.....  .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+......+    
T Consensus       205 FG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  281 (382)
T 2vx3_A          205 FGSSCQLGQR--IYQYIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI  281 (382)
T ss_dssp             CTTCEETTCC--CCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             ccCceecccc--cccccCCccccChHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9999876433  33456999999999998766 8999999999999999999999998765544333221100000    


Q ss_pred             ------------CC------------------CC----------------------------CCCHHHHHHHHHHhhhCC
Q 013354          377 ------------AI------------------PD----------------------------HLSDEGKDFVRKCLQRNP  398 (444)
Q Consensus       377 ------------~~------------------~~----------------------------~~s~~l~~Li~~~L~~dP  398 (444)
                                  .+                  +.                            ..+.++++||.+||+.||
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP  361 (382)
T 2vx3_A          282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP  361 (382)
T ss_dssp             HTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCT
T ss_pred             HHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCCh
Confidence                        00                  00                            001478999999999999


Q ss_pred             CCCcCHHHHHhCCCCCCC
Q 013354          399 LHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       399 ~~Rpt~~elL~hp~~~~~  416 (444)
                      ++|||++|+|+||||++.
T Consensus       362 ~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          362 KTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTSCCHHHHTTSGGGCC-
T ss_pred             hhCCCHHHHhcCcccccC
Confidence            999999999999999875


No 180
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=5e-46  Score=368.01  Aligned_cols=254  Identities=26%  Similarity=0.421  Sum_probs=185.0

Q ss_pred             CCCCCeeee-eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc--
Q 013354          152 SPGSRWKKG-RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL--  228 (444)
Q Consensus       152 ~~~~~~~~~-~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--  228 (444)
                      ...++|.+. ++||+|+||.||+|+++.+++.||||++..      .....+   +....++.++|+||+++++++..  
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~   95 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD------SPKARQ---EVDHHWQASGGPHIVCILDVYENMH   95 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES------SHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC------cHHHHH---HHHHHHHhcCCCChHHHHHHHhhcc
Confidence            345689995 579999999999999999999999999862      122222   22334567799999999999876  


Q ss_pred             --CCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcEEEEec
Q 013354          229 --DDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRVKLADF  301 (444)
Q Consensus       229 --~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~vkL~DF  301 (444)
                        +..+++||||+.+++|.+++.+..  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+||
T Consensus        96 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A           96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence              456899999999999999998764  5999999999999999999999999999999999999976   445999999


Q ss_pred             cccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhh----HHhcC--CCCC
Q 013354          302 GMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAM----FKIGN--SKEL  375 (444)
Q Consensus       302 Gla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~----~~~~~--~~~~  375 (444)
                      |++....... .....||+.|+|||++.... ++.++|||||||++|+|++|+.||.........    ..+..  ....
T Consensus       176 g~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (336)
T 3fhr_A          176 GFAKETTQNA-LQTPCYTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP  253 (336)
T ss_dssp             TTCEEC-----------------------CH-HHHHHHHHHHHHHHHHHHHSSCCC---------------------CCC
T ss_pred             ccceeccccc-cccCCCCcCccChhhhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccC
Confidence            9998665332 33456899999999986655 889999999999999999999999765433221    11111  1111


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      ......++.++++||.+||+.||++|||+.|+|+||||++.
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            12235789999999999999999999999999999999874


No 181
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=7.1e-46  Score=359.17  Aligned_cols=251  Identities=29%  Similarity=0.444  Sum_probs=206.5

Q ss_pred             CCCCCeeeeeeecccCceEEEEEE----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGF----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ....+|++.+.||+|+||+||+|+    +..+++.||+|++..     ......+.+.+|+.++++++||||+++++++.
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   81 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-----STEEHLRDFEREIEILKSLQHDNIVKYKGVCY   81 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc-----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            345789999999999999999998    566899999998863     34555678999999999999999999999986


Q ss_pred             c--CCEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccc
Q 013354          228 L--DDKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       228 ~--~~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                      .  ...+++||||+.+++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            5  356899999999999999998754 4999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh----------------h
Q 013354          305 KHITGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV----------------P  364 (444)
Q Consensus       305 ~~~~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~----------------~  364 (444)
                      ........    .....++..|+|||++.+.. ++.++||||||+++|||++|..||......                .
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCC-CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence            87654322    12334677899999997665 899999999999999999999998642110                1


Q ss_pred             hhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          365 AMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ....+... .....+..+++++.+||.+||+.||++|||+.|+++
T Consensus       241 ~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          241 LIELLKNN-GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcc-CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            11112222 233567889999999999999999999999999876


No 182
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.5e-45  Score=363.17  Aligned_cols=247  Identities=23%  Similarity=0.361  Sum_probs=206.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      .+.+|++.+.||+|+||.||+|++..+++.||||++.....       .+.+.+|+.+++.+ +|+||+++++++...+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   79 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY   79 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc
Confidence            45789999999999999999999999999999998864221       13577899999999 99999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc-----EEEEeccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR-----VKLADFGMAK  305 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-----vkL~DFGla~  305 (444)
                      .++||||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||+++
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           80 NAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             cEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            99999999 99999999874 57999999999999999999999999999999999999998887     9999999998


Q ss_pred             cccCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh---hHHhcCCC-
Q 013354          306 HITGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA---MFKIGNSK-  373 (444)
Q Consensus       306 ~~~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~---~~~~~~~~-  373 (444)
                      .+.....        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||........   +..+.... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~  237 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR  237 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence            7644332        23566999999999998765 89999999999999999999999987543322   22221111 


Q ss_pred             --CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          374 --ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       374 --~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                        ....+...++ ++.+||..||+.||++||++.+|++
T Consensus       238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence              1011123345 9999999999999999999998766


No 183
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.8e-46  Score=369.11  Aligned_cols=251  Identities=26%  Similarity=0.378  Sum_probs=209.9

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcE----EEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEM----CAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~----vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ...+|++.+.||+|+||.||+|++..+++.    ||+|.+...    ......+.+.+|+.++++++||||+++++++. 
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   85 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK----SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-   85 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT----TSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc----ccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-
Confidence            346899999999999999999999888877    555655321    11222345678999999999999999999886 


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      ++..++||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence            45689999999999999999874 46999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          308 TGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       308 ~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      .....   .....++..|+|||++.+.. ++.++|||||||++|||++ |+.||...........+..... ...+..++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~  243 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER-LAQPQICT  243 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB-CCCCTTBC
T ss_pred             CcccccccccCCCCcccccChHHhccCC-CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-CCCCCcCc
Confidence            54432   23345788999999997666 8999999999999999999 9999988766655555554433 35677789


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .++.+||.+||+.||++|||+.+++++
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          244 IDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999999886


No 184
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=6.9e-46  Score=367.39  Aligned_cols=259  Identities=24%  Similarity=0.346  Sum_probs=211.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCC-cEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC------eeeEeee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESG-EMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN------IVRYYGS  225 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g-~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn------Iv~l~~~  225 (444)
                      ...+|++.+.||+|+||.||+|++..++ +.||+|+++.      .....+.+.+|+.+++.++|++      ++.++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~   90 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN------VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW   90 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc------cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence            3568999999999999999999998777 6899999862      2344567788999999887655      8999999


Q ss_pred             EEcCCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE-------------
Q 013354          226 ETLDDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV-------------  290 (444)
Q Consensus       226 ~~~~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll-------------  290 (444)
                      +...+.+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+             
T Consensus        91 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  169 (355)
T 2eu9_A           91 FNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK  169 (355)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred             eeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccc
Confidence            99999999999999 677777776643  69999999999999999999999999999999999999             


Q ss_pred             ------CCCCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh
Q 013354          291 ------DPSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP  364 (444)
Q Consensus       291 ------~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~  364 (444)
                            +.++.+||+|||+++.....  .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENRE  246 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                  56788999999999865433  23456999999999997665 8999999999999999999999998765443


Q ss_pred             hhHHhcCCC-CC-----------------------------------------CCCCCCCCHHHHHHHHHHhhhCCCCCc
Q 013354          365 AMFKIGNSK-EL-----------------------------------------PAIPDHLSDEGKDFVRKCLQRNPLHRP  402 (444)
Q Consensus       365 ~~~~~~~~~-~~-----------------------------------------~~~~~~~s~~l~~Li~~~L~~dP~~Rp  402 (444)
                      ....+.... ..                                         .......+.++.+||++||+.||++||
T Consensus       247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  326 (355)
T 2eu9_A          247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI  326 (355)
T ss_dssp             HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence            322211100 00                                         001112346889999999999999999


Q ss_pred             CHHHHHhCCCCCCCCCCcC
Q 013354          403 TAAWLLEHPFVGNAAPLER  421 (444)
Q Consensus       403 t~~elL~hp~~~~~~~~~~  421 (444)
                      |+.|+|+||||++.....+
T Consensus       327 t~~e~l~hp~f~~~~~~~~  345 (355)
T 2eu9_A          327 TLAEALLHPFFAGLTPEER  345 (355)
T ss_dssp             CHHHHTTSGGGGGCCHHHH
T ss_pred             CHHHHhcChhhcCCChhhc
Confidence            9999999999998765443


No 185
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3e-45  Score=357.89  Aligned_cols=253  Identities=25%  Similarity=0.361  Sum_probs=206.8

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      ..+|++.+.||+|+||.||+|++..+++.||+|++...  ........+.+.+|+.++++++||||+++++++..++.++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSET--LSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGG--GGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcc--cccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            46899999999999999999999999999999988632  2334556688999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC-
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC-  312 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~-  312 (444)
                      +||||+.+++|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence            9999999999999999888899999999999999999999999999999999999999999999999999986644321 


Q ss_pred             -cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCC-CCCCCCCCCCHHHHHHH
Q 013354          313 -PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSK-ELPAIPDHLSDEGKDFV  390 (444)
Q Consensus       313 -~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~s~~l~~Li  390 (444)
                       .....|++.|+|||++.+.. ++.++||||||+++|||++|+.||...........+.... .....+..++.++.+||
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  269 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVI  269 (309)
T ss_dssp             ------CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHH
T ss_pred             cccccCCCcCccCHHHHcCCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHH
Confidence             22445899999999997665 8899999999999999999999997654332222222221 12245677899999999


Q ss_pred             HHHhhhCCCCCc-CHHHHHh
Q 013354          391 RKCLQRNPLHRP-TAAWLLE  409 (444)
Q Consensus       391 ~~~L~~dP~~Rp-t~~elL~  409 (444)
                      .+||+.||++|| +++++++
T Consensus       270 ~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          270 ARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHTCSSGGGSCSSHHHHHH
T ss_pred             HHhccCCHHHHHHhHHHHHH
Confidence            999999999999 8888775


No 186
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-45  Score=363.85  Aligned_cols=255  Identities=24%  Similarity=0.377  Sum_probs=206.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|++..+++.+++|+..+...........+.+.+|+.++++++||||+++++++.... .
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   91 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence            356899999999999999999999988887654433221111222234467889999999999999999999998765 7


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++|+||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            8999999999999999874 469999999999999999999999999999999999999999999999999998764433


Q ss_pred             Cc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHH
Q 013354          312 CP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGK  387 (444)
Q Consensus       312 ~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~  387 (444)
                      ..   ....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||...........+..... ...+..++.++.
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  249 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPICTIDVY  249 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-CCCCTTBCHHHH
T ss_pred             ccccccCCCccccccCHHHHcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCCCccCCHHHH
Confidence            22   2234678899999997665 8999999999999999999 9999988766665555554443 356778999999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +||++||+.||++|||+.|+++.
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999998863


No 187
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=6e-46  Score=371.11  Aligned_cols=257  Identities=25%  Similarity=0.401  Sum_probs=208.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-----------CCCeeeE
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-----------HPNIVRY  222 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------hpnIv~l  222 (444)
                      ..+|++.+.||+|+||+||+|++..+++.||||++..      .....+.+.+|+.++++++           |+||+++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~   91 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG------DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   91 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC------CccchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence            4689999999999999999999999999999998862      3344567788999988886           8899999


Q ss_pred             eeeEEcCC----EEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCCCceEEC----
Q 013354          223 YGSETLDD----KLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAK-NTVHRDIKGANILVD----  291 (444)
Q Consensus       223 ~~~~~~~~----~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~----  291 (444)
                      ++++...+    .+++||||+ +++|.+++.+.  ..+++..++.++.||+.||+|||++ ||+||||||+|||++    
T Consensus        92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~  170 (373)
T 1q8y_A           92 LDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS  170 (373)
T ss_dssp             CEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET
T ss_pred             HHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCC
Confidence            99987654    789999999 89999999874  3599999999999999999999998 999999999999994    


Q ss_pred             --CCCcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh-----
Q 013354          292 --PSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP-----  364 (444)
Q Consensus       292 --~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-----  364 (444)
                        ..+.+||+|||++......  .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......     
T Consensus       171 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          171 PENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             TTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             CcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence              4457999999999876433  23456899999999998766 8999999999999999999999997543211     


Q ss_pred             -hhHHhcC----------------------C---C---------------CCCCCCCCCCHHHHHHHHHHhhhCCCCCcC
Q 013354          365 -AMFKIGN----------------------S---K---------------ELPAIPDHLSDEGKDFVRKCLQRNPLHRPT  403 (444)
Q Consensus       365 -~~~~~~~----------------------~---~---------------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt  403 (444)
                       .+..+..                      .   .               ....++..++.++.+||.+||+.||++|||
T Consensus       248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  327 (373)
T 1q8y_A          248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  327 (373)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence             1111000                      0   0               001233455788999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCc
Q 013354          404 AAWLLEHPFVGNAAPLE  420 (444)
Q Consensus       404 ~~elL~hp~~~~~~~~~  420 (444)
                      ++|+|+||||++....+
T Consensus       328 ~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          328 AGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             HHHHHTCGGGTTCTTCT
T ss_pred             HHHHhhChhhhcccCcc
Confidence            99999999999865443


No 188
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=4.6e-46  Score=359.00  Aligned_cols=247  Identities=22%  Similarity=0.380  Sum_probs=208.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCC-------cEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESG-------EMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGS  225 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g-------~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~  225 (444)
                      ..++|++.+.||+|+||+||+|+++.++       ..||+|++..     ......+.+.+|+.++++++||||++++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK-----AHRNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG-----GGGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc-----ccHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            3568999999999999999999998877       4699998853     222344678899999999999999999999


Q ss_pred             EEcCCEEEEEEeccCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc--------E
Q 013354          226 ETLDDKLYIYLEYVSGGSIYKILQDYGQ-LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR--------V  296 (444)
Q Consensus       226 ~~~~~~~~lv~e~~~ggsL~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--------v  296 (444)
                      +...+..++||||+.+++|.+++.+... +++..++.++.||+.||.|||++||+||||||+|||++.++.        +
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            9999999999999999999999987654 999999999999999999999999999999999999988877        9


Q ss_pred             EEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcC-CCCCCCCCChhhhHHhcCCCCC
Q 013354          297 KLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATT-KPPWSQYEGVPAMFKIGNSKEL  375 (444)
Q Consensus       297 kL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~~~~~  375 (444)
                      ||+|||++......   ....+|+.|+|||++.+...++.++|||||||++|||++| .+||...+..........   .
T Consensus       161 kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~---~  234 (289)
T 4fvq_A          161 KLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED---R  234 (289)
T ss_dssp             EECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT---T
T ss_pred             eeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc---c
Confidence            99999998765332   2344788999999998745589999999999999999995 555554443333333222   2


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ..++...+.++.+||.+||+.||++|||+.|++++
T Consensus       235 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          235 HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            34566778899999999999999999999999986


No 189
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.6e-45  Score=354.73  Aligned_cols=252  Identities=24%  Similarity=0.337  Sum_probs=213.6

Q ss_pred             CCCCCeeeee-eecccCceEEEEEEE--cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGR-LLGRGTFGHVYLGFN--SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~-~LG~G~fg~Vy~a~~--~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ....+|++.+ .||+|+||.||+|.+  ..+++.||+|+++..   .......+.+.+|+.+++.++||||+++++++ .
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE---ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc---ccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            3456899998 999999999999954  566789999988642   22234467899999999999999999999998 5


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      .+..++||||+.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            56789999999999999999988889999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCc----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          309 GQSCP----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       309 ~~~~~----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      .....    ....+++.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+.... .+..+..++
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~  246 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-RMGCPAGCP  246 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTCC
T ss_pred             cCCCcccccccCCCCceeeChHHhccCC-CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCC
Confidence            44322    1233678899999997655 8899999999999999999 999998876655555555443 346678899


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .++.+||.+||+.||++||++.++++
T Consensus       247 ~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          247 REMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999876


No 190
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=9.6e-46  Score=361.03  Aligned_cols=253  Identities=26%  Similarity=0.426  Sum_probs=213.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEE-----cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFN-----SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSE  226 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~-----~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~  226 (444)
                      ..++|++.+.||+|+||.||+|++     ..+++.||+|+++.    .......+.+.+|+.++.++ +||||+++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEeccc----CCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            456899999999999999999985     35678999998863    23344557889999999999 789999999998


Q ss_pred             EcCC-EEEEEEeccCCCCHHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceE
Q 013354          227 TLDD-KLYIYLEYVSGGSIYKILQDYGQ----------------LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANIL  289 (444)
Q Consensus       227 ~~~~-~~~lv~e~~~ggsL~~~l~~~~~----------------l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  289 (444)
                      ...+ .+++||||+.+++|.+++.....                +++..++.++.||+.||.|||++||+||||||+|||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            7654 58999999999999999987544                889999999999999999999999999999999999


Q ss_pred             ECCCCcEEEEeccccccccCCCCc---ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhh
Q 013354          290 VDPSGRVKLADFGMAKHITGQSCP---LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPA  365 (444)
Q Consensus       290 l~~~~~vkL~DFGla~~~~~~~~~---~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~  365 (444)
                      ++.++.+||+|||+++........   ....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||........
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  259 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  259 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred             ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcccc-ccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence            999999999999999876443321   2344788999999997665 8999999999999999998 9999987665444


Q ss_pred             hHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          366 MFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       366 ~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .............+..++.++.+||.+||+.||++|||+.|+++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            333322223345677899999999999999999999999999986


No 191
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.7e-45  Score=362.67  Aligned_cols=254  Identities=25%  Similarity=0.416  Sum_probs=216.2

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCc-----EEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeee
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGE-----MCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGS  225 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~-----~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~  225 (444)
                      ....+|++.+.||+|+||.||+|.+..+++     .||+|.+..    .......+.+.+|+.+++.+ +||||++++++
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccc----ccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            345789999999999999999999976654     799998863    22344567889999999999 89999999999


Q ss_pred             EEcCCEEEEEEeccCCCCHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC
Q 013354          226 ETLDDKLYIYLEYVSGGSIYKILQDY--------------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD  291 (444)
Q Consensus       226 ~~~~~~~~lv~e~~~ggsL~~~l~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  291 (444)
                      +...+.+++||||+.+++|.+++...              ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            99999999999999999999999753              3579999999999999999999999999999999999999


Q ss_pred             CCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhH
Q 013354          292 PSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMF  367 (444)
Q Consensus       292 ~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~  367 (444)
                      .++.+||+|||++........   .....+++.|+|||++.+.. ++.++|||||||++|||++ |..||..........
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  277 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY  277 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence            999999999999986544322   12344678899999987665 8999999999999999998 999998766555444


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          368 KIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       368 ~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .+.........+..++.++.+||.+||+.||++|||+.|++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            4433333445677889999999999999999999999999873


No 192
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.8e-45  Score=358.88  Aligned_cols=253  Identities=25%  Similarity=0.400  Sum_probs=210.2

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCC----cEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESG----EMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g----~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ....+|++.+.||+|+||.||+|+++.++    ..||+|+++..    ........+.+|+.++++++||||+++++++.
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  116 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG----YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS  116 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            45678999999999999999999987653    35999988632    23445567899999999999999999999999


Q ss_pred             cCCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          228 LDDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       228 ~~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                      ..+..++||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            999999999999999999999875 5699999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCC
Q 013354          307 ITGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDH  381 (444)
Q Consensus       307 ~~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  381 (444)
                      ......    .....+++.|+|||++.+.. ++.++|||||||++|||++ |+.||...........+...... ..+..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~  274 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL-PTPMD  274 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-CCCTT
T ss_pred             hccccccccccCCCCccccccCchhcccCC-CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC-CCccc
Confidence            644321    11233678899999997665 8999999999999999999 99999877666666665554433 45678


Q ss_pred             CCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          382 LSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       382 ~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ++.++.+||.+||+.||++||++.+++++
T Consensus       275 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          275 CPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             CBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999998775


No 193
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1e-45  Score=371.26  Aligned_cols=251  Identities=23%  Similarity=0.383  Sum_probs=204.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc---CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS---ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~---~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~  229 (444)
                      ...+|++.+.||+|+||.||+|+++   .++..||||+++..    ......+.+.+|+.++++++||||+++++++...
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  118 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS  118 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            3468999999999999999999886   45778999988632    2345567899999999999999999999999999


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      +..++||||+++++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            99999999999999999998754 69999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCc----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          309 GQSCP----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       309 ~~~~~----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      .....    ....+++.|+|||++.+.. ++.++|||||||++|||++ |+.||...........+...... ..+..++
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~-~~~~~~~  276 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-PPPMDCP  276 (373)
T ss_dssp             ---------------CTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC-CCCTTCB
T ss_pred             cCCccceeccCCCcCCCccChhhhccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccc
Confidence            43211    1223567899999997665 8999999999999999998 99999877665555555444333 4466789


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .++.+||.+||+.||++||++.++++
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            99999999999999999999998765


No 194
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.7e-45  Score=361.88  Aligned_cols=252  Identities=27%  Similarity=0.455  Sum_probs=214.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEc-------CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNS-------ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYG  224 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~-------~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~  224 (444)
                      ..++|++.+.||+|+||.||+|++.       .++..||+|++..    .......+.+.+|+.+++++ +||||+++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  108 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD----DATEKDLSDLVSEMEMMKMIGKHKNIINLLG  108 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCT----TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeecc----CCcHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence            4568999999999999999999985       4577899998863    23445567889999999999 8999999999


Q ss_pred             eEEcCCEEEEEEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCce
Q 013354          225 SETLDDKLYIYLEYVSGGSIYKILQDYG----------------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANI  288 (444)
Q Consensus       225 ~~~~~~~~~lv~e~~~ggsL~~~l~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  288 (444)
                      ++..++.+++||||+.+++|.+++....                .+++..++.++.||+.||.|||++||+||||||+||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            9999999999999999999999998753                389999999999999999999999999999999999


Q ss_pred             EECCCCcEEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChh
Q 013354          289 LVDPSGRVKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVP  364 (444)
Q Consensus       289 ll~~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~  364 (444)
                      |++.++.+||+|||++........   .....+++.|+|||++.+.. ++.++|||||||++|||++ |..||.......
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  267 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  267 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence            999999999999999987654332   22344778899999987655 8999999999999999999 999998766555


Q ss_pred             hhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          365 AMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ....+.... ....+..++.++.+||.+||+.||++|||+.|++++
T Consensus       268 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          268 LFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            444444333 345677899999999999999999999999998875


No 195
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.2e-44  Score=352.97  Aligned_cols=255  Identities=32%  Similarity=0.582  Sum_probs=203.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|++...  ........+.+.+|+.+++.++|+||+++++++..++..
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF--DLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTT--SSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehh--hccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            345799999999999999999999999999999988642  223455667889999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          233 YIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      ++||||+.+++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999999975    3458999999999999999999999999999999999999999999999999988664


Q ss_pred             CCCC-cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh--hhhHHhcCCCCCCCCCCCCCHH
Q 013354          309 GQSC-PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV--PAMFKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       309 ~~~~-~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~s~~  385 (444)
                      .... .....|++.|+|||++.+.. ++.++||||||+++|||++|..||......  .....+......+.....++.+
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE  266 (310)
T ss_dssp             -----------CCSSCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHH
T ss_pred             CCCccccccCCCeeEeChHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHH
Confidence            4322 23345899999999997665 899999999999999999999999754322  2233333333333334678999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +.+||.+||+.||++|||+.+++++
T Consensus       267 l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          267 LRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999998873


No 196
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2.6e-45  Score=354.98  Aligned_cols=249  Identities=22%  Similarity=0.304  Sum_probs=209.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++.....       .+.+.+|+.+++.+ +|+||+++++++.....
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~   80 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH   80 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence            45689999999999999999999999999999998863221       23567899999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc-----EEEEeccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR-----VKLADFGMAK  305 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-----vkL~DFGla~  305 (444)
                      .++||||+ +++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||++.
T Consensus        81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A           81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence            99999999 999999998754 5999999999999999999999999999999999999987765     9999999998


Q ss_pred             cccCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh---hhHHhcC---
Q 013354          306 HITGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP---AMFKIGN---  371 (444)
Q Consensus       306 ~~~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~---  371 (444)
                      .......        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......   .+..+..   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  238 (298)
T 1csn_A          160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ  238 (298)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCccCCCCCcccCCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence            7654322        23456999999999997666 8999999999999999999999998754322   1222111   


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          372 SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       372 ~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ....+.+...+++++.+||.+||+.||++|||+.+|++.
T Consensus       239 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            111223345789999999999999999999999987753


No 197
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=4.7e-45  Score=375.26  Aligned_cols=245  Identities=27%  Similarity=0.469  Sum_probs=211.8

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC-
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD-  230 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-  230 (444)
                      ...++|++.+.||+|+||.||+|.+.  ++.||||+++...       ..+.+.+|+.+|++++||||+++++++.... 
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  260 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG  260 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC
Confidence            34568999999999999999999875  7899999986321       3357889999999999999999999977654 


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQ--LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      .+++||||+.+++|.+++.+.+.  +++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       261 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          261 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            79999999999999999987654  7999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHH
Q 013354          309 GQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGK  387 (444)
Q Consensus       309 ~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~  387 (444)
                      ...  ....++..|+|||++.+.. ++.++|||||||+||||++ |+.||...........+...... ..+..++.++.
T Consensus       341 ~~~--~~~~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-~~p~~~~~~l~  416 (450)
T 1k9a_A          341 STQ--DTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVY  416 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC-CCCTTCCHHHH
T ss_pred             ccc--cCCCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCcCCHHHH
Confidence            322  2235788999999998766 8999999999999999998 99999887776666666655443 56788999999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHh
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      +||.+||+.||++|||+.++++
T Consensus       417 ~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          417 DVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999875


No 198
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=3.9e-45  Score=358.13  Aligned_cols=253  Identities=26%  Similarity=0.403  Sum_probs=216.7

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEc-----CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNS-----ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~-----~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|+++     .+++.||+|++..    .........+.+|+.+++.++|+||+++++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE----AASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCT----TSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccc----ccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            44578999999999999999999886     4578899998863    23344556788999999999999999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcE
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDY----------GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRV  296 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~v  296 (444)
                      ...+..++||||+.+++|.+++...          ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            9999999999999999999999763          356899999999999999999999999999999999999999999


Q ss_pred             EEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCC
Q 013354          297 KLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNS  372 (444)
Q Consensus       297 kL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  372 (444)
                      ||+|||++........   .....+|+.|+|||++.+.. ++.++|||||||++|||++ |..||...........+...
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  256 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG  256 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCC-CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC
Confidence            9999999986543321   12334688999999997665 8999999999999999999 89999876655555554443


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          373 KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       373 ~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      . ....+..++.++.+||.+||+.||++|||+.|++++
T Consensus       257 ~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          257 G-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C-cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3 345678899999999999999999999999999987


No 199
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.5e-45  Score=381.67  Aligned_cols=250  Identities=26%  Similarity=0.440  Sum_probs=217.4

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.+.||+|+||.||+|+++.++..||||+++...      ...+.+.+|+.+|++++||||+++++++...+.
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~  290 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP  290 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS------SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc------cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            34567999999999999999999999989999999886321      124678899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +++||||+.+++|.+++.+.  ..+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++....
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            99999999999999999874  3589999999999999999999999999999999999999999999999999987644


Q ss_pred             CCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          310 QSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       310 ~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ...  .....++..|+|||++.... ++.++|||||||+||||++ |..||...+.......+..... ...+..++.++
T Consensus       371 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  448 (495)
T 1opk_A          371 DTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPEGCPEKV  448 (495)
T ss_dssp             CCEECCTTCCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-CCCCTTCCHHH
T ss_pred             CceeecCCCcCCcceeCHhHHhcCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHH
Confidence            321  22334678899999997665 8999999999999999999 9999988776666655555443 35678899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHh
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .+||.+||+.||++|||+.+|++
T Consensus       449 ~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          449 YELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCcChhHCcCHHHHHH
Confidence            99999999999999999999876


No 200
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.8e-45  Score=349.16  Aligned_cols=249  Identities=23%  Similarity=0.404  Sum_probs=214.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|++....   ..   .+.+.+|+.++++++||||+++++++..++..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   78 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA---MS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   78 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTT---BC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccC---CC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCe
Confidence            3468999999999999999999987 57889999986421   11   25688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC
Q 013354          233 YIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS  311 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~  311 (444)
                      ++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             EEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            9999999999999999875 458999999999999999999999999999999999999999999999999998664322


Q ss_pred             --CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          312 --CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       312 --~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                        ......++..|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..++.++.+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~  236 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLASTHVYQ  236 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CCCCTTSCHHHHH
T ss_pred             ccccccccccccccChhhhcCCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc-CCCCccCcHHHHH
Confidence              112344778899999997655 8999999999999999999 9999987666555555554433 3456778999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHhC
Q 013354          389 FVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ||.+||+.||++|||+.+++++
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          237 IMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999874


No 201
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4.4e-45  Score=354.34  Aligned_cols=252  Identities=30%  Similarity=0.459  Sum_probs=207.2

Q ss_pred             CCCCeeeeeeecccCceEEEEEE----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGF----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ...+|++.+.||+|+||.||+|+    +..+++.||+|++....    .....+.+.+|+.+++.++|+||+++++++..
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES----GGNHIADLKKEIEILRNLYHENIVKYKGICTE   94 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc----cchhHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence            34579999999999999999998    56789999999986422    22234678899999999999999999999987


Q ss_pred             C--CEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          229 D--DKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       229 ~--~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      .  ..+++||||+.+++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK  174 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence            6  6689999999999999999554 569999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCC--------------ChhhhH
Q 013354          306 HITGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYE--------------GVPAMF  367 (444)
Q Consensus       306 ~~~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~--------------~~~~~~  367 (444)
                      .......    .....+|..|+|||++.+.. ++.++||||||+++|||++|..||....              ......
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (302)
T 4e5w_A          175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSK-FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV  253 (302)
T ss_dssp             ECCTTCCEEECCCCTTCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred             cccCCCcceeccCCCCCCccccCCeeecCCC-CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence            7655432    22345788899999997665 8899999999999999999998864211              111111


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          368 KIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       368 ~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ...........+..+++++.+||.+||+.||++|||+.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            112222334567889999999999999999999999999886


No 202
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.6e-45  Score=375.72  Aligned_cols=249  Identities=25%  Similarity=0.463  Sum_probs=213.6

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      ....++|++.+.||+|+||.||+|.+.. +..||||+++...      ...+.+.+|+.+|++++||||+++++++. ++
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS------BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC------ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            3456789999999999999999999864 7889999986421      12467889999999999999999999986 56


Q ss_pred             EEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      .+++||||+.+++|.++++..  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            789999999999999999754  368999999999999999999999999999999999999999999999999998764


Q ss_pred             CCC--CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHH
Q 013354          309 GQS--CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       309 ~~~--~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~  385 (444)
                      ...  ......++..|+|||++.... ++.++|||||||+||||++ |+.||...........+...... ..+..++++
T Consensus       336 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  413 (454)
T 1qcf_A          336 DNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM-PRPENCPEE  413 (454)
T ss_dssp             CHHHHTTCSSSSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCC-CCCTTSCHH
T ss_pred             CCceeccCCCcccccccCHHHhccCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHH
Confidence            322  112334678899999997665 8999999999999999999 99999887766666666555444 457789999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      +.+||.+||+.||++|||+++|++
T Consensus       414 l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          414 LYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHHH
Confidence            999999999999999999999875


No 203
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.6e-45  Score=361.93  Aligned_cols=249  Identities=22%  Similarity=0.336  Sum_probs=201.6

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC-
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD-  230 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-  230 (444)
                      ....+|++.+.||+|+||+||+|++.  ++.||||++..      .........+|+.++++++||||+++++++.... 
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   92 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPI------QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS   92 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECG------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             cchhhchhhheecccCceEEEEEEEC--CCEEEEEEeec------CchHHHHHHHHHHHHhcCCCCCchhhcceeccCCC
Confidence            44568999999999999999999875  79999999863      1223345566999999999999999999988743 


Q ss_pred             ---EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------CcccCCCCCCceEECCCCcEE
Q 013354          231 ---KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK----------NTVHRDIKGANILVDPSGRVK  297 (444)
Q Consensus       231 ---~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~----------~ivH~Dlkp~NIll~~~~~vk  297 (444)
                         .+++||||+.+++|.+++++ ..+++..++.++.||+.||+|||+.          +|+||||||+|||++.++.+|
T Consensus        93 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k  171 (322)
T 3soc_A           93 VDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC  171 (322)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred             CCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence               47999999999999999987 5699999999999999999999999          999999999999999999999


Q ss_pred             EEeccccccccCCCC---cccccCCCcccCcccccCc----CCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh-------
Q 013354          298 LADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNS----NGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV-------  363 (444)
Q Consensus       298 L~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~----~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-------  363 (444)
                      |+|||+++.......   .....||+.|+|||++.+.    ..++.++|||||||++|||++|+.||......       
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  251 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE  251 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence            999999987654332   2335689999999999763    23567899999999999999999999753321       


Q ss_pred             --------hhh-HHhcCCCCCCCCCC-----CCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          364 --------PAM-FKIGNSKELPAIPD-----HLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       364 --------~~~-~~~~~~~~~~~~~~-----~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                              ..+ ..+......+.++.     ..+.++.+||.+||+.||++|||+.|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                    111 11222222233322     23456999999999999999999999886


No 204
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.2e-45  Score=361.26  Aligned_cols=257  Identities=26%  Similarity=0.368  Sum_probs=213.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEEE-----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGF-----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~-----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ....+|++.+.||+|+||.||+|+     +..+++.||+|++..    .........+.+|+.++++++||||+++++++
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE----VCSEQDELDFLMEALIISKFNHQNIVRCIGVS  102 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCS----SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecc----ccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence            455789999999999999999998     556788999998852    23344556788999999999999999999999


Q ss_pred             EcCCEEEEEEeccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcE
Q 013354          227 TLDDKLYIYLEYVSGGSIYKILQDYG-------QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRV  296 (444)
Q Consensus       227 ~~~~~~~lv~e~~~ggsL~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~v  296 (444)
                      ...+..++||||+.+++|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||++.   +..+
T Consensus       103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence            99999999999999999999998753       3899999999999999999999999999999999999984   4469


Q ss_pred             EEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCC
Q 013354          297 KLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNS  372 (444)
Q Consensus       297 kL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  372 (444)
                      ||+|||++........   .....+++.|+|||++.+.. ++.++|||||||++|||++ |..||...........+...
T Consensus       183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~  261 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG  261 (327)
T ss_dssp             EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EECccccccccccccccccCCCcCCCcceeCHhHhcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC
Confidence            9999999976543321   22345788999999997665 8999999999999999998 99999876655555555444


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          373 KELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       373 ~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                      .. ...+..++.++.+||.+||+.||++||++.+++++.|+.
T Consensus       262 ~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          262 GR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            33 356778999999999999999999999999999998864


No 205
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=9.8e-45  Score=354.14  Aligned_cols=256  Identities=24%  Similarity=0.363  Sum_probs=207.4

Q ss_pred             CCCCCCCeeeeeeecccCceEEEEEEEcC---CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeE
Q 013354          150 PTSPGSRWKKGRLLGRGTFGHVYLGFNSE---SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSE  226 (444)
Q Consensus       150 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~---~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~  226 (444)
                      ......+|++.+.||+|+||.||+|++..   +++.||+|++...   .......+.+.+|+.++++++||||+++++++
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD---NSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC------CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecc---ccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            33456789999999999999999998865   4568999988642   23445567889999999999999999999998


Q ss_pred             EcCC-----EEEEEEeccCCCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc
Q 013354          227 TLDD-----KLYIYLEYVSGGSIYKILQD------YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR  295 (444)
Q Consensus       227 ~~~~-----~~~lv~e~~~ggsL~~~l~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  295 (444)
                      ...+     ..++||||+.+++|.+++..      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence            7754     35999999999999999953      245999999999999999999999999999999999999999999


Q ss_pred             EEEEeccccccccCCCC---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcC
Q 013354          296 VKLADFGMAKHITGQSC---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGN  371 (444)
Q Consensus       296 vkL~DFGla~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  371 (444)
                      +||+|||++........   .....+++.|+|||++.+.. ++.++||||||+++|||++ |..||...........+..
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  264 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH  264 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCC-ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHc
Confidence            99999999987644321   12334788999999997665 8999999999999999999 9999988766665555544


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          372 SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       372 ~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ... +..+..++.++.+||.+||+.||++|||+.+++++
T Consensus       265 ~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          265 GHR-LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TCC-CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCC-CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            433 45678899999999999999999999999999874


No 206
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=6.3e-45  Score=358.04  Aligned_cols=253  Identities=26%  Similarity=0.435  Sum_probs=211.5

Q ss_pred             CCCCCeeeeeeecccCceEEEEEE----EcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGF----NSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~----~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      ....+|++.+.||+|+||.||+|+    +..+++.||+|++..     ......+.+.+|+.++++++|+||+++++++.
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   94 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-----SGPDQQRDFQREIQILKALHSDFIVKYRGVSY   94 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc-----CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Confidence            345689999999999999999998    467899999998863     33455677899999999999999999999886


Q ss_pred             --cCCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccc
Q 013354          228 --LDDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       228 --~~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                        ....+++||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  174 (327)
T 3lxl_A           95 GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA  174 (327)
T ss_dssp             CSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred             cCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccc
Confidence              456799999999999999999874 46999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh--------------hhh
Q 013354          305 KHITGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV--------------PAM  366 (444)
Q Consensus       305 ~~~~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--------------~~~  366 (444)
                      ........    .....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||......              ...
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3lxl_A          175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL  253 (327)
T ss_dssp             EECCTTCSEEECSSCCCSCGGGSCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred             eecccCCccceeeccCCccccccCHHHhccCC-CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence            87654332    22345788899999997665 899999999999999999999998542211              111


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          367 FKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       367 ~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ............+..+++++.+||.+||+.||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            11222223345678899999999999999999999999998654


No 207
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=1.3e-44  Score=347.95  Aligned_cols=251  Identities=25%  Similarity=0.380  Sum_probs=210.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCC---CcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSES---GEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~---g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~  229 (444)
                      ..++|++.+.||+|+||+||+|++..+   +..||+|++...    ......+.+.+|+.+++.++||||+++++++..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   85 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD----CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE   85 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT----SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc----cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence            456899999999999999999987543   346999987632    2344567899999999999999999999998654


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                       ..++||||+.+++|.+++.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        86 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           86 -PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             -SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             -CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence             5689999999999999998754 59999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHH
Q 013354          309 GQSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       309 ~~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~  385 (444)
                      ....  .....+++.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..++++
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  242 (281)
T 3cc6_A          165 DEDYYKASVTRLPIKWMSPESINFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR-LPKPDLCPPV  242 (281)
T ss_dssp             --------CCCCCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC-CCCCTTCCHH
T ss_pred             cccccccccCCCCcceeCchhhccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC-CCCCCCCCHH
Confidence            4332  22344788999999997655 8999999999999999998 9999987666555555544433 3456789999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +.+||.+||+.||++|||+.|++++
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999999999999874


No 208
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.8e-45  Score=350.30  Aligned_cols=252  Identities=25%  Similarity=0.364  Sum_probs=215.0

Q ss_pred             CCCeeeee-eecccCceEEEEEEEc--CCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          154 GSRWKKGR-LLGRGTFGHVYLGFNS--ESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       154 ~~~~~~~~-~LG~G~fg~Vy~a~~~--~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      ..+|.+.+ .||+|+||.||+|.+.  .++..||+|+++..    ......+.+.+|+.++++++||||+++++++. .+
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~   82 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AE   82 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SS
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc----cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CC
Confidence            45677776 9999999999999864  46788999998642    34556678999999999999999999999984 55


Q ss_pred             EEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..++||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            689999999999999999754 4599999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCc----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          310 QSCP----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       310 ~~~~----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      ....    ....+|+.|+|||++.+.. ++.++|||||||++|||++ |+.||...........+..... +.++..++.
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~  240 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-MECPPECPP  240 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC-CCCCTTCCH
T ss_pred             CcceeeccccccccccccCHHHhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCc-CCCCCCcCH
Confidence            3322    2234688999999997555 8999999999999999998 9999988777666666555443 466788999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHhCCC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLEHPF  412 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~hp~  412 (444)
                      ++.+||.+||+.||++||++.+++++.+
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999999999999998743


No 209
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.1e-45  Score=369.16  Aligned_cols=255  Identities=20%  Similarity=0.320  Sum_probs=200.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCC-----CcEEEEEEEeecccccccH-H-----HHHHHHHHHHHHHccCCCCeee
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSES-----GEMCAMKEVTLFSDDAKSK-E-----SAQQLGQEIALLSRLRHPNIVR  221 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~-----g~~vaiK~i~~~~~~~~~~-~-----~~~~~~~Ei~~l~~l~hpnIv~  221 (444)
                      ...+|++.+.||+|+||.||+|.+..+     ++.||||++.........+ .     ....+.+|+..++.++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456899999999999999999998764     5889999886432111000 0     1123445667788889999999


Q ss_pred             EeeeEEcC----CEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC--CCC
Q 013354          222 YYGSETLD----DKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD--PSG  294 (444)
Q Consensus       222 l~~~~~~~----~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--~~~  294 (444)
                      +++++...    ...++||||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++  .++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence            99998764    5589999999 99999999876 5799999999999999999999999999999999999998  889


Q ss_pred             cEEEEeccccccccCCCCc--------ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhh
Q 013354          295 RVKLADFGMAKHITGQSCP--------LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAM  366 (444)
Q Consensus       295 ~vkL~DFGla~~~~~~~~~--------~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~  366 (444)
                      .+||+|||+++.+......        ....||+.|+|||++.+.. ++.++|||||||+||||++|+.||.........
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVA-PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY  270 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence            9999999999765433211        2345999999999997766 899999999999999999999999853332221


Q ss_pred             HHhcC---CCCCC------CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          367 FKIGN---SKELP------AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       367 ~~~~~---~~~~~------~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .....   ....+      .....++.++.+||..||+.||++||++.+|++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11100   00000      012567999999999999999999999998764


No 210
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.2e-45  Score=366.32  Aligned_cols=256  Identities=22%  Similarity=0.296  Sum_probs=201.1

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcC---CCcEEEEEEEeecccccccHH------HHHHHHHHHHHHHccCCCCeeeE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSE---SGEMCAMKEVTLFSDDAKSKE------SAQQLGQEIALLSRLRHPNIVRY  222 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~---~g~~vaiK~i~~~~~~~~~~~------~~~~~~~Ei~~l~~l~hpnIv~l  222 (444)
                      ....+|++.+.||+|+||.||+|++..   ++..+|+|++.........+.      ....+.+|+..++.++|+||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            345789999999999999999999987   788999998874322111110      11346688999999999999999


Q ss_pred             eeeEEc----CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC--cE
Q 013354          223 YGSETL----DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG--RV  296 (444)
Q Consensus       223 ~~~~~~----~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~v  296 (444)
                      ++++..    ....++||||+ +++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSE
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcE
Confidence            999887    78899999999 999999998877899999999999999999999999999999999999998877  99


Q ss_pred             EEEeccccccccCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh-hH
Q 013354          297 KLADFGMAKHITGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA-MF  367 (444)
Q Consensus       297 kL~DFGla~~~~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~  367 (444)
                      ||+|||+++.+.....        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ..
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVA-LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence            9999999986643221        13456999999999998765 89999999999999999999999964322211 11


Q ss_pred             HhcCCCCCCCCC---------CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          368 KIGNSKELPAIP---------DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       368 ~~~~~~~~~~~~---------~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .... .....++         ..++.++++||.+||+.||++|||+++|++.
T Consensus       272 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          272 TAKT-NLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHH-HHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHH-hhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            1110 0001112         2789999999999999999999999998763


No 211
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-44  Score=347.74  Aligned_cols=249  Identities=25%  Similarity=0.443  Sum_probs=208.2

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCc---EEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGE---MCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~---~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      .|+..++||+|+||+||+|++..+++   .||+|++..    .......+.+.+|+.+++.++||||+++++++...+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR----ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT----CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc----cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence            57888999999999999999765554   799998753    23445667889999999999999999999999876554


Q ss_pred             -EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          233 -YIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       233 -~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                       ++||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred             cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence             9999999999999999873 46899999999999999999999999999999999999999999999999999765432


Q ss_pred             C-----CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCH
Q 013354          311 S-----CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSD  384 (444)
Q Consensus       311 ~-----~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~  384 (444)
                      .     ......+++.|+|||++.+.. ++.++|||||||++|+|++ +.+||...+.......+..... ...+..+++
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  255 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR-LPQPEYCPD  255 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC-CCCCTTCCH
T ss_pred             cccccccCcCCCCCccccChhhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC-CCCCccchH
Confidence            2     223345788999999997665 8999999999999999999 4555555554444444444333 456778999


Q ss_pred             HHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          385 EGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       385 ~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ++.+||.+||+.||++|||+.++++.
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999988763


No 212
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=8.1e-46  Score=363.50  Aligned_cols=254  Identities=24%  Similarity=0.342  Sum_probs=207.9

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .....+|++.+.||+|+||.||+|++. +++.||+|++...     .....+.+.+|+.+++.++||||+++++++...+
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE-----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC-----CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc-----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            345578999999999999999999865 6899999987532     2234567889999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYG----QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                      ..++||||+.+++|.+++....    .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK  188 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            9999999999999999987543    489999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCC---CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH-------HhcC-----
Q 013354          307 ITGQS---CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF-------KIGN-----  371 (444)
Q Consensus       307 ~~~~~---~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-------~~~~-----  371 (444)
                      .....   ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..........       ....     
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (321)
T 2qkw_B          189 GTELDQTHLSTVVKGTLGYIDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ  267 (321)
T ss_dssp             CSSSSCCCCBCCCEEETTTCCHHHHHHCB-CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred             cccccccccccccCCCccccCHHHhcCCC-CCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence            54322   123345899999999997665 8999999999999999999999997543322110       0000     


Q ss_pred             ---CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCC
Q 013354          372 ---SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHP  411 (444)
Q Consensus       372 ---~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp  411 (444)
                         ......++..++.++.+||.+||+.||++|||+.|++++-
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence               1111122334567899999999999999999999999763


No 213
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=3.7e-45  Score=351.23  Aligned_cols=246  Identities=25%  Similarity=0.436  Sum_probs=211.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc-----
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL-----  228 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----  228 (444)
                      +.+|++.+.||+|+||.||+|++..+++.||+|++....         +.+.+|+.+++.++||||+++++++..     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   80 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP   80 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence            357999999999999999999999999999999987421         245689999999999999999998754     


Q ss_pred             -----------CCEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc
Q 013354          229 -----------DDKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR  295 (444)
Q Consensus       229 -----------~~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  295 (444)
                                 ...+++||||+.+++|.+++.+.  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             --------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred             ccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCC
Confidence                       45589999999999999999764  56999999999999999999999999999999999999999999


Q ss_pred             EEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC
Q 013354          296 VKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL  375 (444)
Q Consensus       296 vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~  375 (444)
                      +||+|||++.............|++.|+|||++.+.. ++.++||||||+++|||++|..||...  ......+..    
T Consensus       161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~----  233 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRD----  233 (284)
T ss_dssp             EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSC-CCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHT----
T ss_pred             EEECcchhheeccccccccccCCcccccChhhhccCC-CcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhc----
Confidence            9999999998876655555667999999999997665 899999999999999999999887431  112222222    


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ..++..++.++++||.+||+.||++|||+.|++++.|.-.
T Consensus       234 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          234 GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            1345678999999999999999999999999999987543


No 214
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=9.2e-45  Score=350.71  Aligned_cols=252  Identities=27%  Similarity=0.498  Sum_probs=200.6

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      .....+|++.+.||+|+||+||+|++.   ..||+|+++..   .......+.+.+|+.++++++|+||+++++++ ...
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~   92 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVT---APTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP   92 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCS---SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEecc---CCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence            455678999999999999999999754   35999988643   23455667899999999999999999999965 456


Q ss_pred             EEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..++||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            689999999999999999643 4699999999999999999999999999999999999999999999999999976543


Q ss_pred             C---CCcccccCCCcccCccccc--CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhc-CC---CCCCCCCC
Q 013354          310 Q---SCPLSIKGSPYWMAPEVIK--NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIG-NS---KELPAIPD  380 (444)
Q Consensus       310 ~---~~~~~~~gt~~y~APE~~~--~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~~---~~~~~~~~  380 (444)
                      .   .......||+.|+|||++.  ....++.++|||||||++|||++|+.||............. ..   .....+..
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS  252 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence            2   2223456899999999986  23347899999999999999999999998766654443322 22   22234456


Q ss_pred             CCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          381 HLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       381 ~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .+++++.+||.+||+.||++|||+.++++
T Consensus       253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            78999999999999999999999999886


No 215
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.5e-44  Score=348.64  Aligned_cols=249  Identities=23%  Similarity=0.399  Sum_probs=207.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCC---cEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE-cCC
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESG---EMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET-LDD  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g---~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-~~~  230 (444)
                      .+|++.+.||+|+||+||+|++..++   ..+|+|.+..    .......+.+.+|+.++++++||||+++++++. .++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR----ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT----CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc----CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence            47999999999999999999975433   3588887753    234556678999999999999999999999854 456


Q ss_pred             EEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..++||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            789999999999999999864 4589999999999999999999999999999999999999999999999999986644


Q ss_pred             CCC-----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          310 QSC-----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       310 ~~~-----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      ...     .....+|+.|+|||++.+.. ++.++||||||+++|||++ +.+||...........+..... ...+..++
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  258 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LLQPEYCP  258 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC-CCCCTTCC
T ss_pred             cchhccccccCCCCCccccChHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC-CCCCccCC
Confidence            321     22344778999999997665 8999999999999999999 6777877666555555544433 35577899


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .++.+||.+||+.||++|||+.|+++
T Consensus       259 ~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          259 DPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999886


No 216
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=8.8e-45  Score=354.86  Aligned_cols=252  Identities=23%  Similarity=0.332  Sum_probs=206.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE----c
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET----L  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~----~  228 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++..     ......+.+.+|+.+++.++||||+++++++.    .
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC-----HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE-----SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec-----CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            45689999999999999999999999999999998864     33455678899999999999999999999886    3


Q ss_pred             CCEEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQD----YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                      ....++||||+.+++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            4578999999999999999986    356999999999999999999999999999999999999999999999999988


Q ss_pred             ccccCCCC----------cccccCCCcccCcccccCcC--CCChhhhHHHHHHHHHHHHcCCCCCCCCC--ChhhhHHhc
Q 013354          305 KHITGQSC----------PLSIKGSPYWMAPEVIKNSN--GCNLAVDIWSLGCTVIEMATTKPPWSQYE--GVPAMFKIG  370 (444)
Q Consensus       305 ~~~~~~~~----------~~~~~gt~~y~APE~~~~~~--~~s~~sDvwSlGvil~elltG~~Pf~~~~--~~~~~~~~~  370 (444)
                      ........          .....||+.|+|||++....  .++.++|||||||++|||++|+.||....  .......+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  261 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ  261 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence            75432111          01234799999999986443  26889999999999999999999995311  111122222


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          371 NSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       371 ~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .... ...+..++.++.+||.+||+.||++|||+.+++++
T Consensus       262 ~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          262 NQLS-IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCC-CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            2222 23346789999999999999999999999999986


No 217
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.6e-45  Score=371.03  Aligned_cols=253  Identities=25%  Similarity=0.411  Sum_probs=208.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC--
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD--  230 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--  230 (444)
                      ...+|++.++||+|+||+||+|++..+++.||||++.....    ....+.+.+|+.++++++||||+++++++....  
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~   82 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF----LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG----GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC
Confidence            35689999999999999999999999999999999864221    122456778999999999999999999988754  


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE----CCCCcEEEEeccc
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQ---LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV----DPSGRVKLADFGM  303 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~vkL~DFGl  303 (444)
                      ..++||||+.+++|.+++.+...   +++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            78999999999999999976433   9999999999999999999999999999999999999    7777899999999


Q ss_pred             cccccCCCCcccccCCCcccCcccccCc-------CCCChhhhHHHHHHHHHHHHcCCCCCCCCCC----hhhhHHhcCC
Q 013354          304 AKHITGQSCPLSIKGSPYWMAPEVIKNS-------NGCNLAVDIWSLGCTVIEMATTKPPWSQYEG----VPAMFKIGNS  372 (444)
Q Consensus       304 a~~~~~~~~~~~~~gt~~y~APE~~~~~-------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~----~~~~~~~~~~  372 (444)
                      ++............||+.|+|||++...       ..++.++|||||||++|||++|+.||.....    ...+..+...
T Consensus       163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  242 (396)
T 4eut_A          163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (396)
T ss_dssp             CEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred             ceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence            9887666655667799999999998641       2378899999999999999999999975332    2223332222


Q ss_pred             CCC-----------------------CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          373 KEL-----------------------PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       373 ~~~-----------------------~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ...                       ..+...++..+.+||++||+.||++||++.|+++
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            110                       1122345678899999999999999999998754


No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.4e-44  Score=355.51  Aligned_cols=249  Identities=24%  Similarity=0.399  Sum_probs=190.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEE----
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSET----  227 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~----  227 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||+|++..     ......+.+.+|+.++.++. ||||+++++++.    
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS-----NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE-----SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC-----CchHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            34589999999999999999999999999999998853     34455678889999999996 999999999984    


Q ss_pred             ----cCCEEEEEEeccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCCCceEECCCCcEEE
Q 013354          228 ----LDDKLYIYLEYVSGGSIYKILQD---YGQLGESAIRSYTQQILSGLEYLHAKN--TVHRDIKGANILVDPSGRVKL  298 (444)
Q Consensus       228 ----~~~~~~lv~e~~~ggsL~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~vkL  298 (444)
                          ....+++||||+. |+|.+++..   .+.+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||
T Consensus       101 ~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl  179 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL  179 (337)
T ss_dssp             TSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred             ccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEE
Confidence                3456899999995 799998865   456999999999999999999999999  999999999999999999999


Q ss_pred             EeccccccccCCCCc-------------ccccCCCcccCccccc--CcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh
Q 013354          299 ADFGMAKHITGQSCP-------------LSIKGSPYWMAPEVIK--NSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV  363 (444)
Q Consensus       299 ~DFGla~~~~~~~~~-------------~~~~gt~~y~APE~~~--~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~  363 (444)
                      +|||+++........             ....||+.|+|||++.  ....++.++|||||||++|||++|+.||......
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~  259 (337)
T 3ll6_A          180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL  259 (337)
T ss_dssp             CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence            999999876543221             1345899999999983  2333789999999999999999999999764433


Q ss_pred             hhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCC
Q 013354          364 PAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHP  411 (444)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp  411 (444)
                      ....    .......+..++.++.+||++||+.||++|||+.|++++-
T Consensus       260 ~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          260 RIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ----------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             Hhhc----CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            2221    1122233566788899999999999999999999999874


No 219
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3.5e-44  Score=383.41  Aligned_cols=247  Identities=24%  Similarity=0.363  Sum_probs=208.8

Q ss_pred             eee-eeeecccCceEEEEEEE--cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEE
Q 013354          157 WKK-GRLLGRGTFGHVYLGFN--SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLY  233 (444)
Q Consensus       157 ~~~-~~~LG~G~fg~Vy~a~~--~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~  233 (444)
                      +.+ .+.||+|+||.||+|.+  +.+++.||||+++..   .......+.+.+|+.+|++++|||||++++++.. +.++
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~  445 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE---ANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWM  445 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGG---GGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccc---cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEE
Confidence            444 34799999999999965  456789999988642   2233345778999999999999999999999875 4588


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCc
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCP  313 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~  313 (444)
                      +||||+.+++|.+++.....+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+++.+......
T Consensus       446 lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             EEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            99999999999999998888999999999999999999999999999999999999999999999999999876543321


Q ss_pred             ----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          314 ----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       314 ----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                          ....+|+.|+|||++.+.. ++.++|||||||+||||++ |+.||...........+..... ...+..++.++.+
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~-~~~p~~~~~~l~~  603 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-MGCPAGCPREMYD  603 (635)
T ss_dssp             ---------CGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHH
T ss_pred             cccccCCCCceeeeChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHH
Confidence                2234678899999997655 8999999999999999998 9999998777666666665554 3667889999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHh
Q 013354          389 FVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ||.+||+.||++||++.+|++
T Consensus       604 li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          604 LMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999999875


No 220
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=8.9e-45  Score=350.05  Aligned_cols=255  Identities=26%  Similarity=0.410  Sum_probs=207.5

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcC-CCc--EEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSE-SGE--MCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~-~g~--~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ....+|++.+.||+|+||+||+|++.. +++  .||+|+++...  .......+.+.+|+.++++++||||+++++++..
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   92 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV--LSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT   92 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCc--cCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc
Confidence            345689999999999999999998643 333  68999876321  1233456788999999999999999999999887


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                      .. .++||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++...
T Consensus        93 ~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           93 PP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             SS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            65 88999999999999999874 46999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCc----ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCC
Q 013354          308 TGQSCP----LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHL  382 (444)
Q Consensus       308 ~~~~~~----~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  382 (444)
                      ......    ....++..|+|||++.+.. ++.++||||||+++|||++ |+.||...........+.........+..+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC  250 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTC
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCc
Confidence            544321    2334778899999997655 8999999999999999999 999998877666666665555555667789


Q ss_pred             CHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          383 SDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       383 s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +.++.+||.+||+.||++|||+.+++++
T Consensus       251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          251 PQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999999999873


No 221
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.4e-44  Score=345.36  Aligned_cols=248  Identities=29%  Similarity=0.495  Sum_probs=210.4

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|.+. ++..||+|++....   .   ..+.+.+|+.+++.++||||+++++++.. +.
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~   81 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS---M---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP   81 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS---S---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc---c---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CC
Confidence            34578999999999999999999876 47789999886321   1   23568899999999999999999998764 45


Q ss_pred             EEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .++||||+.+++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            899999999999999997543  699999999999999999999999999999999999999999999999999987654


Q ss_pred             CCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          310 QSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       310 ~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ...  .....++..|+|||++.+.. ++.++||||||+++|||++ |+.||...........+..... ...+..++.++
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  239 (279)
T 1qpc_A          162 NEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPEEL  239 (279)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHH
T ss_pred             cccccccCCCCccCccChhhhccCC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccC-CCCcccccHHH
Confidence            322  12334678899999997655 8999999999999999999 9999987666555555544433 35677899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHh
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .+||.+||+.||++|||+.++++
T Consensus       240 ~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          240 YQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhccChhhCCCHHHHHH
Confidence            99999999999999999999876


No 222
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.7e-44  Score=369.87  Aligned_cols=256  Identities=27%  Similarity=0.459  Sum_probs=212.7

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...++|++.+.||+|+||.||+|.+.. +..||||+++...   .   ..+.+.+|+.+|++++||||+++++++.. +.
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---M---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS---S---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC---C---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence            445789999999999999999999875 5679999886321   1   13568899999999999999999999876 66


Q ss_pred             EEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      +++||||+.+++|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            89999999999999999753  4699999999999999999999999999999999999999999999999999987643


Q ss_pred             CCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          310 QSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       310 ~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ...  .....++..|+|||++.... ++.++|||||||+||||++ |+.||......+....+...... ..+..++.++
T Consensus       333 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  410 (452)
T 1fmk_A          333 NEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESL  410 (452)
T ss_dssp             ----------CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-CCCTTSCHHH
T ss_pred             CceecccCCcccccccCHhHHhcCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHH
Confidence            321  12334678899999997665 8999999999999999999 99999887766666666655443 4677899999


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhC--CCCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEH--PFVGNAA  417 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~h--p~~~~~~  417 (444)
                      .+||.+||+.||++|||+++|++.  .++....
T Consensus       411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence            999999999999999999998874  6665543


No 223
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=2.4e-45  Score=360.46  Aligned_cols=256  Identities=23%  Similarity=0.357  Sum_probs=206.3

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ....+|++.+.||+|+||.||+|++. +++.||+|++.....    ......+.+|+.+++.++||||+++++++...+.
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  101 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERT----QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE  101 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred             HHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccC----chHHHHHHHHHHHHHhccCCCccceEEEEecCCc
Confidence            45578999999999999999999754 589999998864221    1122357899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCCCceEECCCCcEEEEecccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYG----QLGESAIRSYTQQILSGLEYLHAK---NTVHRDIKGANILVDPSGRVKLADFGMA  304 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~vkL~DFGla  304 (444)
                      .++||||+.+++|.+++....    .+++..++.++.||+.||+|||++   ||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~  181 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA  181 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSC
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccc
Confidence            999999999999999998753    389999999999999999999999   9999999999999999999999999999


Q ss_pred             ccccCCCC--cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCC-----CCChhhhHHh---cCCC-
Q 013354          305 KHITGQSC--PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQ-----YEGVPAMFKI---GNSK-  373 (444)
Q Consensus       305 ~~~~~~~~--~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~-----~~~~~~~~~~---~~~~-  373 (444)
                      ........  .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..     .........+   .... 
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 3uim_A          182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK  260 (326)
T ss_dssp             EECCSSSSCEECCCCSCGGGCCHHHHHHSE-ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred             cccCcccccccccccCCcCccCHHHhccCC-CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence            87643332  23345999999999997665 89999999999999999999999952     1111111111   0111 


Q ss_pred             --------CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCC
Q 013354          374 --------ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFV  413 (444)
Q Consensus       374 --------~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~  413 (444)
                              .....+...+.++.+||.+||+.||++|||+.|+++|-+-
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                    1112223345789999999999999999999999998653


No 224
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-44  Score=363.09  Aligned_cols=250  Identities=23%  Similarity=0.395  Sum_probs=201.9

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCC---cEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc-CC
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESG---EMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL-DD  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g---~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~  230 (444)
                      ..|++.+.||+|+||+||+|++..++   ..||+|.++.    .......+.+.+|+.++++++||||+++++++.. ++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  164 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR----ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG  164 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCS----CSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCC----CCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC
Confidence            36889999999999999999876433   4578887753    2233456789999999999999999999998654 56


Q ss_pred             EEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..++||||+.+++|.+++++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus       165 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence            7899999999999999998653 589999999999999999999999999999999999999999999999999986543


Q ss_pred             CCC-----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCC
Q 013354          310 QSC-----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       310 ~~~-----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s  383 (444)
                      ...     .....+++.|+|||++.+.. ++.++|||||||++|||++ |.+||...........+..... ...+..++
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~-~~~p~~~~  322 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LLQPEYCP  322 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCC-CCCCTTCC
T ss_pred             cccccccccCCCCCcccccChHHhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCC-CCCCCCCC
Confidence            321     12334678899999997665 8999999999999999999 7888987666555555554443 35577899


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .++.+||.+||+.||++|||+.|++++
T Consensus       323 ~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          323 DPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999998875


No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.4e-44  Score=345.49  Aligned_cols=244  Identities=27%  Similarity=0.454  Sum_probs=203.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC-CE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD-DK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-~~  231 (444)
                      ..++|++.+.||+|+||.||+|.+.  ++.||+|+++..       ...+.+.+|+.++++++|+||+++++++... +.
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG   89 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--C
T ss_pred             ChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCc
Confidence            4568999999999999999999874  889999987531       1346788999999999999999999987554 47


Q ss_pred             EEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQ--LGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .++||||+.+++|.+++.+...  +++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            8999999999999999987543  89999999999999999999999999999999999999999999999999886543


Q ss_pred             CCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHH
Q 013354          310 QSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKD  388 (444)
Q Consensus       310 ~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~  388 (444)
                      ..  ....+++.|+|||++.+.. ++.++||||||+++|||++ |+.||...........+.... ....+..++.++.+
T Consensus       170 ~~--~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  245 (278)
T 1byg_A          170 TQ--DTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KMDAPDGCPPAVYE  245 (278)
T ss_dssp             --------CCTTTSCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-CCCCCTTCCHHHHH
T ss_pred             cc--cCCCccccccCHHHhCCCC-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCcccCCHHHHH
Confidence            32  2335788999999997655 8999999999999999998 999998776655555554443 34567889999999


Q ss_pred             HHHHHhhhCCCCCcCHHHHHh
Q 013354          389 FVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       389 Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ||++||+.||++|||+.|+++
T Consensus       246 li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          246 VMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCChhhCCCHHHHHH
Confidence            999999999999999999876


No 226
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=3.9e-44  Score=346.16  Aligned_cols=248  Identities=22%  Similarity=0.345  Sum_probs=201.1

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeee-EEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGS-ETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~-~~~~~~  231 (444)
                      .+++|++.+.||+|+||.||+|++..+++.||+|++....       ..+.+.+|+.+++.++|++++..+.. +...+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence            4578999999999999999999999999999999865321       22357789999999998876666655 466788


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEeccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKHI  307 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~~  307 (444)
                      .++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             eEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            99999999 9999999985 3569999999999999999999999999999999999999   78889999999999876


Q ss_pred             cCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh---hhHHhcC---CC
Q 013354          308 TGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP---AMFKIGN---SK  373 (444)
Q Consensus       308 ~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~---~~  373 (444)
                      .....        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......   .+..+..   ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  237 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence            54322        22456899999999998766 8999999999999999999999997644321   2221111   11


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          374 ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       374 ~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ..+.....+++++.+||.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            111233567999999999999999999999998876


No 227
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=2.7e-44  Score=348.40  Aligned_cols=246  Identities=29%  Similarity=0.438  Sum_probs=196.5

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHc--cCCCCeeeEeeeEEc--
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSR--LRHPNIVRYYGSETL--  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~--l~hpnIv~l~~~~~~--  228 (444)
                      ..++|++.+.||+|+||+||+|++  +++.||||++..     .   ....+.+|.+++..  ++||||+++++++..  
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS-----R---DEKSWFRETELYNTVMLRHENILGFIASDMTSR   75 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG-----G---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc-----c---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence            456899999999999999999987  589999998853     1   12334455666555  899999999998654  


Q ss_pred             --CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCcccCCCCCCceEECCCCcEEE
Q 013354          229 --DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLH--------AKNTVHRDIKGANILVDPSGRVKL  298 (444)
Q Consensus       229 --~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivH~Dlkp~NIll~~~~~vkL  298 (444)
                        ...+++||||+.+++|.++++. ..+++..++.++.||+.||+|||        +++|+||||||+|||++.++.+||
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence              3568999999999999999965 57999999999999999999999        999999999999999999999999


Q ss_pred             EeccccccccCCCCc-----ccccCCCcccCcccccCcC-----CCChhhhHHHHHHHHHHHHcC----------CCCCC
Q 013354          299 ADFGMAKHITGQSCP-----LSIKGSPYWMAPEVIKNSN-----GCNLAVDIWSLGCTVIEMATT----------KPPWS  358 (444)
Q Consensus       299 ~DFGla~~~~~~~~~-----~~~~gt~~y~APE~~~~~~-----~~s~~sDvwSlGvil~elltG----------~~Pf~  358 (444)
                      +|||+++........     ....||+.|+|||++.+..     .++.++|||||||++|||++|          ..||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            999999766443322     2346999999999997653     245799999999999999999          88886


Q ss_pred             CCCCh----hhhHH-hcCCCCCCCCC-----CCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          359 QYEGV----PAMFK-IGNSKELPAIP-----DHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       359 ~~~~~----~~~~~-~~~~~~~~~~~-----~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .....    ..... .......+.++     ..++.++.+||.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            53321    22222 22222223333     235678999999999999999999999986


No 228
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.1e-43  Score=343.19  Aligned_cols=248  Identities=22%  Similarity=0.345  Sum_probs=204.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeee-EEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGS-ETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~-~~~~~~  231 (444)
                      .+++|++.+.||+|+||.||+|++..+++.||+|++.....       .+.+.+|+.+++.++|++++..+.. +.....
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-------hhHHHHHHHHHHHhhcCCCCCccccccCCCCc
Confidence            35789999999999999999999999999999998864221       1357789999999998876665554 466788


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEEC---CCCcEEEEeccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVD---PSGRVKLADFGMAKHI  307 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~vkL~DFGla~~~  307 (444)
                      .++||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++...
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            99999999 9999999984 35699999999999999999999999999999999999994   7889999999999876


Q ss_pred             cCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh---hhhHHhcC---CC
Q 013354          308 TGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV---PAMFKIGN---SK  373 (444)
Q Consensus       308 ~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---~~~~~~~~---~~  373 (444)
                      .....        .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......   ..+..+..   ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  237 (296)
T 3uzp_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccCChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC
Confidence            55432        23456999999999998766 899999999999999999999999864322   22222111   11


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          374 ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       374 ~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ..+.+...+++++.+||.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            111234678999999999999999999999998776


No 229
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.6e-44  Score=377.56  Aligned_cols=255  Identities=27%  Similarity=0.464  Sum_probs=216.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|.+.. +..||||+++...   .   ..+.+.+|+.+|++++|+||+++++++.. +.+
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---M---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS---S---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC---C---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            34679999999999999999999875 5679999986421   1   13568899999999999999999999876 668


Q ss_pred             EEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCC
Q 013354          233 YIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQ  310 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~  310 (444)
                      ++||||+.+++|.++++..  ..+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+++.....
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  416 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  416 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence            9999999999999999753  46999999999999999999999999999999999999999999999999999876432


Q ss_pred             C--CcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHH
Q 013354          311 S--CPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGK  387 (444)
Q Consensus       311 ~--~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~  387 (444)
                      .  ......++..|+|||++.... ++.++|||||||+||||++ |+.||......+....+.....+ ..+..++.++.
T Consensus       417 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~  494 (535)
T 2h8h_A          417 EYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLH  494 (535)
T ss_dssp             HHHTTCSTTSCGGGSCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC-CCCTTCCHHHH
T ss_pred             ceecccCCcCcccccCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHH
Confidence            1  112334678899999997665 8999999999999999999 99999887766666666655444 45778999999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhC--CCCCCCC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEH--PFVGNAA  417 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~h--p~~~~~~  417 (444)
                      +||.+||+.||++|||+++|++.  .+|....
T Consensus       495 ~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          495 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence            99999999999999999998875  6665543


No 230
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=3.4e-44  Score=351.83  Aligned_cols=248  Identities=30%  Similarity=0.449  Sum_probs=206.1

Q ss_pred             CeeeeeeecccCceEEEEEEE----cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc--C
Q 013354          156 RWKKGRLLGRGTFGHVYLGFN----SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL--D  229 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~----~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~  229 (444)
                      .|++.+.||+|+||+||++.+    ..+++.||||+++..    ......+.+.+|+.++++++||||+++++++..  .
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD----AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA  107 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc----cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence            349999999999999988754    457899999998632    334556789999999999999999999999987  4


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      ..+++||||+.+++|.+++.+. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred             ceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence            6899999999999999999764 699999999999999999999999999999999999999999999999999987755


Q ss_pred             CCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCCh--------------hhhHHhcC
Q 013354          310 QSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGV--------------PAMFKIGN  371 (444)
Q Consensus       310 ~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--------------~~~~~~~~  371 (444)
                      ...    .....++..|+|||++.+.. ++.++|||||||++|||++|..||......              ........
T Consensus       187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          187 GHEYYRVREDGDSPVFWYAPECLKEYK-FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TCSEEEC---CCCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred             cccccccccCCCCCceeeChHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence            432    22345788899999997665 889999999999999999999998642211              01111222


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          372 SKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       372 ~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .......+..++.++.+||++||+.||++|||+.|+++
T Consensus       266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            23334567889999999999999999999999999885


No 231
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.9e-44  Score=347.61  Aligned_cols=243  Identities=30%  Similarity=0.522  Sum_probs=198.8

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ..++|++.+.||+|+||.||+|++.  ++.||+|++..       ....+.+.+|+.++++++||||+++++++.+  ..
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~   74 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES-------ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PV   74 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS-------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TT
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC-------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--Cc
Confidence            4468999999999999999999875  78999998742       1234678899999999999999999998764  47


Q ss_pred             EEEEeccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCCCceEECCCCc-EEEEeccccc
Q 013354          233 YIYLEYVSGGSIYKILQDYG---QLGESAIRSYTQQILSGLEYLHA---KNTVHRDIKGANILVDPSGR-VKLADFGMAK  305 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~-vkL~DFGla~  305 (444)
                      ++||||+++++|.+++....   .+++..++.++.||+.||+|||+   +||+||||||+|||++.++. +||+|||++.
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A           75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC  154 (307)
T ss_dssp             EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred             EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence            89999999999999998754   37899999999999999999999   89999999999999988876 7999999997


Q ss_pred             cccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh--hhHHhcCCCCCCCCCCCCC
Q 013354          306 HITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP--AMFKIGNSKELPAIPDHLS  383 (444)
Q Consensus       306 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~s  383 (444)
                      ......  ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......  ....+.. ...+..+..++
T Consensus       155 ~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  230 (307)
T 2eva_A          155 DIQTHM--TNNKGSAAWMAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-GTRPPLIKNLP  230 (307)
T ss_dssp             ------------CCTTSSCHHHHTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-TCCCCCBTTCC
T ss_pred             cccccc--ccCCCCCceEChhhhCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-CCCCCcccccC
Confidence            654322  2345899999999997665 8999999999999999999999997654332  2222222 23345677899


Q ss_pred             HHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          384 DEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       384 ~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .++.+||.+||+.||++|||+.+++++
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999999999999999999999998873


No 232
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.8e-44  Score=356.41  Aligned_cols=246  Identities=20%  Similarity=0.286  Sum_probs=201.0

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcC--------CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeee---
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSE--------SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVR---  221 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~--------~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~---  221 (444)
                      .+.+|++.+.||+|+||.||+|++..        +++.||+|++...          +.+.+|+.++++++||||++   
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~  109 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWK  109 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHH
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhh
Confidence            35789999999999999999999987        4889999988631          35778999999999999887   


Q ss_pred             ------------EeeeEEc-CCEEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCC
Q 013354          222 ------------YYGSETL-DDKLYIYLEYVSGGSIYKILQDY--GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGA  286 (444)
Q Consensus       222 ------------l~~~~~~-~~~~~lv~e~~~ggsL~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  286 (444)
                                  +++++.. +...++||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       110 ~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~  188 (352)
T 2jii_A          110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAE  188 (352)
T ss_dssp             HHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGG
T ss_pred             hhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHH
Confidence                        5666665 78899999999 99999999985  67999999999999999999999999999999999


Q ss_pred             ceEECCCC--cEEEEeccccccccCCCC--------cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCC
Q 013354          287 NILVDPSG--RVKLADFGMAKHITGQSC--------PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPP  356 (444)
Q Consensus       287 NIll~~~~--~vkL~DFGla~~~~~~~~--------~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~P  356 (444)
                      |||++.++  .+||+|||+++.+.....        .....||+.|+|||++.+.. ++.++|||||||+||||++|+.|
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCC
Confidence            99999988  899999999986543221        12346999999999997765 89999999999999999999999


Q ss_pred             CCCCC-ChhhhHHhcC--CCCCCCCC------CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          357 WSQYE-GVPAMFKIGN--SKELPAIP------DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       357 f~~~~-~~~~~~~~~~--~~~~~~~~------~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      |.... ..........  ......+.      ..++.++.+||.+||+.||++|||+++|++.
T Consensus       268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            97654 2222211110  01111111      2569999999999999999999999988663


No 233
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=9.9e-44  Score=350.25  Aligned_cols=257  Identities=25%  Similarity=0.378  Sum_probs=195.4

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc---
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL---  228 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~---  228 (444)
                      ...++|++.+.||+|+||.||+|++  +++.||||++...     .. .......|+..+..++|+||+++++.+..   
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~-~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~   81 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA-----NR-QNFINEKNIYRVPLMEHDNIARFIVGDERVTA   81 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG-----GH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT
T ss_pred             cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc-----ch-hhHHHHHHHHHHHhccCcchhhheeccccccc
Confidence            4457899999999999999999976  5899999998631     11 11122234444556899999999985432   


Q ss_pred             --CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CcccCCCCCCceEECCCCcEE
Q 013354          229 --DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK---------NTVHRDIKGANILVDPSGRVK  297 (444)
Q Consensus       229 --~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------~ivH~Dlkp~NIll~~~~~vk  297 (444)
                        ...+++||||+++++|.+++.. ...++..++.++.||+.||.|||++         +|+||||||+|||++.++.+|
T Consensus        82 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  160 (336)
T 3g2f_A           82 DGRMEYLLVMEYYPNGSLXKYLSL-HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV  160 (336)
T ss_dssp             TSCEEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred             CCCceEEEEEecCCCCcHHHHHhh-cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence              3367899999999999999977 4569999999999999999999999         999999999999999999999


Q ss_pred             EEeccccccccCCC---------CcccccCCCcccCcccccCc------CCCChhhhHHHHHHHHHHHHcCCCCCCCCCC
Q 013354          298 LADFGMAKHITGQS---------CPLSIKGSPYWMAPEVIKNS------NGCNLAVDIWSLGCTVIEMATTKPPWSQYEG  362 (444)
Q Consensus       298 L~DFGla~~~~~~~---------~~~~~~gt~~y~APE~~~~~------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  362 (444)
                      |+|||+++.+....         ......||+.|+|||++.+.      ..++.++|||||||++|||++|..||.....
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            99999998764322         12244699999999998762      2366799999999999999999776643221


Q ss_pred             hh-----------------hh-HHhcCCCCCCCCCCC------CCHHHHHHHHHHhhhCCCCCcCHHHH------HhCCC
Q 013354          363 VP-----------------AM-FKIGNSKELPAIPDH------LSDEGKDFVRKCLQRNPLHRPTAAWL------LEHPF  412 (444)
Q Consensus       363 ~~-----------------~~-~~~~~~~~~~~~~~~------~s~~l~~Li~~~L~~dP~~Rpt~~el------L~hp~  412 (444)
                      ..                 .. .........+.++..      +++++.+||.+||+.||++|||+.|+      +.++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            11                 00 111122223344443      34589999999999999999999998      55788


Q ss_pred             CCCCC
Q 013354          413 VGNAA  417 (444)
Q Consensus       413 ~~~~~  417 (444)
                      -++..
T Consensus       321 ~~~~~  325 (336)
T 3g2f_A          321 ERNKS  325 (336)
T ss_dssp             CC---
T ss_pred             Hhccc
Confidence            77653


No 234
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.8e-43  Score=343.43  Aligned_cols=231  Identities=28%  Similarity=0.464  Sum_probs=190.4

Q ss_pred             CCeeee-eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHH-HccCCCCeeeEeeeEEc----
Q 013354          155 SRWKKG-RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALL-SRLRHPNIVRYYGSETL----  228 (444)
Q Consensus       155 ~~~~~~-~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l-~~l~hpnIv~l~~~~~~----  228 (444)
                      .+|.+. ++||+|+||.||+|.++.+++.||+|++..      .    ..+.+|+.++ +.++||||+++++++..    
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~   86 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------C----PKARREVELHWRASQCPHIVRIVDVYENLYAG   86 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------S----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------c----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence            467777 889999999999999999999999998852      1    2456788877 66699999999999876    


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC---CCcEEEEeccc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYG--QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP---SGRVKLADFGM  303 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~vkL~DFGl  303 (444)
                      +..+++||||+.+++|.+++.+..  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            678999999999999999998864  5999999999999999999999999999999999999988   78899999998


Q ss_pred             cccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC--CCCC--
Q 013354          304 AKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL--PAIP--  379 (444)
Q Consensus       304 a~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~--  379 (444)
                      +.....                      ..++.++|||||||++|||++|+.||..................  ..++  
T Consensus       167 a~~~~~----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (299)
T 3m2w_A          167 AKETTG----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP  224 (299)
T ss_dssp             CEECTT----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHH
T ss_pred             cccccc----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCch
Confidence            865431                      22688999999999999999999999765443322211111111  1222  


Q ss_pred             --CCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCCC
Q 013354          380 --DHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNAA  417 (444)
Q Consensus       380 --~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~~  417 (444)
                        ..++.++++||.+||+.||++|||+.|+|+||||++..
T Consensus       225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             hcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence              56899999999999999999999999999999998754


No 235
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.3e-44  Score=364.97  Aligned_cols=252  Identities=25%  Similarity=0.387  Sum_probs=196.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~  231 (444)
                      ...+|...++||+|+||+||. ....+++.||||++.....        ..+.+|+.+|+.+ +||||+++++++.....
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~   92 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQF   92 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETTE
T ss_pred             ccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCCE
Confidence            345799999999999999764 3456799999998853211        1245799999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC-----CCcEEEEeccccc
Q 013354          232 LYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP-----SGRVKLADFGMAK  305 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-----~~~vkL~DFGla~  305 (444)
                      .|+||||+. ++|.+++.... .+.+..++.++.||+.||.|||++||+||||||+|||++.     ...+||+|||+++
T Consensus        93 ~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A           93 QYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             EEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence            999999995 69999998753 3566677899999999999999999999999999999953     2358899999998


Q ss_pred             cccCCC----CcccccCCCcccCcccccC--cCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCC-
Q 013354          306 HITGQS----CPLSIKGSPYWMAPEVIKN--SNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPA-  377 (444)
Q Consensus       306 ~~~~~~----~~~~~~gt~~y~APE~~~~--~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~-  377 (444)
                      ......    ......||+.|+|||++.+  ...++.++|||||||++|||++ |..||...........+.. ..... 
T Consensus       172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~-~~~~~~  250 (432)
T 3p23_A          172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA-CSLDCL  250 (432)
T ss_dssp             CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTC-CCCTTS
T ss_pred             eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhcc-CCcccc
Confidence            765432    2234569999999999974  2347889999999999999999 9999965443332222221 11111 


Q ss_pred             -CCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          378 -IPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       378 -~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                       .....+..+++||.+||+.||++|||++|+++||||.+
T Consensus       251 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence             12334667899999999999999999999999999975


No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.1e-43  Score=361.42  Aligned_cols=253  Identities=30%  Similarity=0.447  Sum_probs=195.5

Q ss_pred             CCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCC
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDD  230 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~  230 (444)
                      .....|...++||+|+||+||.+ ...+|+.||||++...        ..+.+.+|+.+++++ +||||+++++++..++
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~--------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG--------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             hhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH--------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            34567888899999999999875 4567999999988631        124567899999876 8999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC----------
Q 013354          231 KLYIYLEYVSGGSIYKILQDYGQL-------GESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS----------  293 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~~l-------~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----------  293 (444)
                      .+++||||+. ++|.+++......       ++..++.++.||+.||+|||++||+||||||+|||++.+          
T Consensus        83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence            9999999995 6999999875432       233457899999999999999999999999999999654          


Q ss_pred             ---CcEEEEeccccccccCCCC-----cccccCCCcccCcccccC------cCCCChhhhHHHHHHHHHHHHc-CCCCCC
Q 013354          294 ---GRVKLADFGMAKHITGQSC-----PLSIKGSPYWMAPEVIKN------SNGCNLAVDIWSLGCTVIEMAT-TKPPWS  358 (444)
Q Consensus       294 ---~~vkL~DFGla~~~~~~~~-----~~~~~gt~~y~APE~~~~------~~~~s~~sDvwSlGvil~ellt-G~~Pf~  358 (444)
                         +.+||+|||+++.......     .....||+.|+|||++.+      ...++.++|||||||++|||++ |..||.
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  241 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG  241 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence               4799999999987654332     123469999999999865      2348899999999999999999 999997


Q ss_pred             CCCChhhhHHhcCCCCCCCC----CCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          359 QYEGVPAMFKIGNSKELPAI----PDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~----~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ....... ..+......+..    +..++.++++||.+||+.||++|||+.++++||||.+
T Consensus       242 ~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          242 DKYSRES-NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             STTTHHH-HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             CchhhHH-HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            6443321 111111111111    1234688999999999999999999999999999974


No 237
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-43  Score=346.43  Aligned_cols=245  Identities=26%  Similarity=0.432  Sum_probs=194.0

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHc--cCCCCeeeEeeeEEcC--
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSR--LRHPNIVRYYGSETLD--  229 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~--l~hpnIv~l~~~~~~~--  229 (444)
                      .++|++.+.||+|+||.||+|+++  ++.||||++..     . ..  ....+|.+++..  ++|+||+++++++...  
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-----~-~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFT-----T-EE--ASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEG-----G-GH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEec-----c-cc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            458999999999999999999875  89999998852     1 11  233344555544  4899999999998877  


Q ss_pred             --CEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccCCCCCCceEECCCCcEEEE
Q 013354          230 --DKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK--------NTVHRDIKGANILVDPSGRVKLA  299 (444)
Q Consensus       230 --~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivH~Dlkp~NIll~~~~~vkL~  299 (444)
                        ..+++||||+.+++|.++++. ..+++..++.++.||+.||.|||++        ||+||||||+|||++.++.+||+
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             CCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence              789999999999999999976 4799999999999999999999999        99999999999999999999999


Q ss_pred             eccccccccCCCCc-----ccccCCCcccCcccccCcCCCCh------hhhHHHHHHHHHHHHcC----------CCCCC
Q 013354          300 DFGMAKHITGQSCP-----LSIKGSPYWMAPEVIKNSNGCNL------AVDIWSLGCTVIEMATT----------KPPWS  358 (444)
Q Consensus       300 DFGla~~~~~~~~~-----~~~~gt~~y~APE~~~~~~~~s~------~sDvwSlGvil~elltG----------~~Pf~  358 (444)
                      |||++..+......     ....||+.|+|||++.+.. ...      ++|||||||++|||++|          ..||.
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~  263 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH  263 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence            99999766443322     2456999999999997654 333      49999999999999999          67775


Q ss_pred             CCCCh----hhhHH-hcCCCCCCCCCC-----CCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          359 QYEGV----PAMFK-IGNSKELPAIPD-----HLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       359 ~~~~~----~~~~~-~~~~~~~~~~~~-----~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      .....    ..... +......+.++.     .+++++.+||.+||+.||++|||+.|+++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            53221    11221 222222233332     466789999999999999999999999875


No 238
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=352.59  Aligned_cols=253  Identities=24%  Similarity=0.405  Sum_probs=208.1

Q ss_pred             CCCCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCC
Q 013354          151 TSPGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDD  230 (444)
Q Consensus       151 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~  230 (444)
                      ....++|++.+.||+|+||.||+|++..   .+|+|+++.....   ....+.+.+|+.++++++|+||+++++++...+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN---EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC---CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC---HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            3456789999999999999999998854   4999988753221   122345678999999999999999999999999


Q ss_pred             EEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccC
Q 013354          231 KLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       231 ~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~  309 (444)
                      .+++||||+.+++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            9999999999999999998754 699999999999999999999999999999999999998 67899999999875432


Q ss_pred             C------CCcccccCCCcccCcccccC--------cCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCC
Q 013354          310 Q------SCPLSIKGSPYWMAPEVIKN--------SNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKEL  375 (444)
Q Consensus       310 ~------~~~~~~~gt~~y~APE~~~~--------~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~  375 (444)
                      .      .......|++.|+|||++..        ...++.++|||||||++|||++|+.||...........+......
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  261 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP  261 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence            1      12223458999999999864        234789999999999999999999999877666555555555444


Q ss_pred             CCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          376 PAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       376 ~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ...+..++.++.+||.+||+.||++|||+.++++.
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            44445789999999999999999999999999873


No 239
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.4e-43  Score=344.83  Aligned_cols=250  Identities=26%  Similarity=0.428  Sum_probs=204.8

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYIY  235 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv  235 (444)
                      .|..++.||+|+||.||+|.+  +++.||+|++..... .......+.+.+|+.++++++||||+++++++...+..++|
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  108 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLV  108 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTT-SCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccC-cchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEE
Confidence            355568999999999999975  588999998864322 22344567889999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          236 LEYVSGGSIYKILQDY---GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       236 ~e~~~ggsL~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      |||+.+++|.+++...   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence            9999999999999743   4599999999999999999999999999999999999999999999999999986544322


Q ss_pred             ---cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHh----cC---------CCCCC
Q 013354          313 ---PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKI----GN---------SKELP  376 (444)
Q Consensus       313 ---~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~----~~---------~~~~~  376 (444)
                         .....||+.|+|||++.+.  ++.++||||||+++|+|++|..||...........+    ..         ....+
T Consensus       189 ~~~~~~~~g~~~y~aPE~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (307)
T 2nru_A          189 TVMTSRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN  266 (307)
T ss_dssp             CEECSSCCSCGGGCCHHHHTTE--ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred             cccccccCCCcCcCChHHhcCC--CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc
Confidence               2234689999999998643  789999999999999999999999765433222111    11         11222


Q ss_pred             CCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          377 AIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       377 ~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ..+..++.++.+||.+||+.||++|||+.+++++
T Consensus       267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3344556789999999999999999999999864


No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.6e-43  Score=347.98  Aligned_cols=250  Identities=30%  Similarity=0.445  Sum_probs=207.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEE----cCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFN----SESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL  228 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~----~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~  228 (444)
                      ...+|++.+.||+|+||.||+|++    ..+++.||+|++..     ......+.+.+|+.++++++|+||+++++++..
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  113 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-----STEEHLRDFEREIEILKSLQHDNIVKYKGVCYS  113 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-----CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence            456799999999999999999984    56799999998863     233455788999999999999999999998866


Q ss_pred             CC--EEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          229 DD--KLYIYLEYVSGGSIYKILQDY-GQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       229 ~~--~~~lv~e~~~ggsL~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      .+  .+++||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       114 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          114 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             ----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            43  689999999999999999875 359999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC----cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCC----------Ch------hh
Q 013354          306 HITGQSC----PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYE----------GV------PA  365 (444)
Q Consensus       306 ~~~~~~~----~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~----------~~------~~  365 (444)
                      .......    .....++..|+|||++.+.. ++.++|||||||++|||++|..||....          ..      ..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHHCE-EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hccccccccccccCCCCceeEECchhhcCCC-CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence            7654432    12234677899999997655 8999999999999999999999885321          00      01


Q ss_pred             hHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          366 MFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       366 ~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ...+.... ....+..++.++.+||++||+.||++|||+.|+++
T Consensus       273 ~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          273 IELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHTTC-CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhcCC-CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            11122222 23457789999999999999999999999999885


No 241
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=5.9e-43  Score=362.08  Aligned_cols=248  Identities=22%  Similarity=0.341  Sum_probs=204.7

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC-CCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH-PNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-pnIv~l~~~~~~~~~  231 (444)
                      .+.+|++.++||+|+||.||+|++..+++.||||++......       +++.+|+.+++.++| ++|..+..++...+.
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~   77 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGDY   77 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETTE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCE
Confidence            356899999999999999999999999999999987643221       246789999999987 566666667778889


Q ss_pred             EEEEEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE---CCCCcEEEEeccccccc
Q 013354          232 LYIYLEYVSGGSIYKILQD-YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV---DPSGRVKLADFGMAKHI  307 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~vkL~DFGla~~~  307 (444)
                      .++||||+ +++|.+++.. ...+++..++.++.||+.||+|||++|||||||||+||||   +.++.+||+|||+++.+
T Consensus        78 ~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           78 NVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99999999 9999999986 4579999999999999999999999999999999999999   57889999999999876


Q ss_pred             cCCCCc--------ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhh---hHHhcC---CC
Q 013354          308 TGQSCP--------LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPA---MFKIGN---SK  373 (444)
Q Consensus       308 ~~~~~~--------~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~---~~~~~~---~~  373 (444)
                      ......        ....||+.|+|||++.+.. ++.++|||||||+||||++|+.||........   +..+..   ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVAT  235 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHS
T ss_pred             cCCccccccccccccccCCCccccCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccc
Confidence            544321        2456999999999998766 89999999999999999999999987554322   111111   11


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          374 ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       374 ~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ....+...++.++.+||..||+.||++||++.+|++
T Consensus       236 ~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            112333678999999999999999999999987654


No 242
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=2e-43  Score=352.94  Aligned_cols=243  Identities=18%  Similarity=0.214  Sum_probs=195.9

Q ss_pred             CCCCCeeeeeeecccCceEEEEE-----EEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC---CCCeeeEe
Q 013354          152 SPGSRWKKGRLLGRGTFGHVYLG-----FNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR---HPNIVRYY  223 (444)
Q Consensus       152 ~~~~~~~~~~~LG~G~fg~Vy~a-----~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~---hpnIv~l~  223 (444)
                      ....+|++.+.||+|+||+||+|     .+..+++.||+|++..     ..   ...+.+|+.++..++   |+||++++
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~-----~~---~~~~~~e~~~~~~l~~~~~~~iv~~~  133 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP-----AN---PWEFYIGTQLMERLKPSMQHMFMKFY  133 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS-----CC---HHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC-----CC---hhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence            34578999999999999999999     4677899999998863     11   234566777777776   99999999


Q ss_pred             eeEEcCCEEEEEEeccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECC------
Q 013354          224 GSETLDDKLYIYLEYVSGGSIYKILQD-----YGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDP------  292 (444)
Q Consensus       224 ~~~~~~~~~~lv~e~~~ggsL~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~------  292 (444)
                      +++...+..++||||+.+++|.+++..     ...+++..++.++.||+.||+|||++|||||||||+||||+.      
T Consensus       134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred             eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence            999999999999999999999999975     346999999999999999999999999999999999999988      


Q ss_pred             -----CCcEEEEecccccccc---CCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChh
Q 013354          293 -----SGRVKLADFGMAKHIT---GQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVP  364 (444)
Q Consensus       293 -----~~~vkL~DFGla~~~~---~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~  364 (444)
                           ++.+||+|||+++.+.   .........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~  292 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKVKNEGGE  292 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCC-CCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence                 8999999999997543   223334567999999999998766 8999999999999999999999995432211


Q ss_pred             hhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          365 AMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      .  .+  .......  ..++.+.+++..||+.+|.+|++..+.+.
T Consensus       293 ~--~~--~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          293 C--KP--EGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             E--EE--CSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             e--ee--chhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence            1  11  1111111  34788999999999999999965544333


No 243
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.2e-44  Score=380.23  Aligned_cols=256  Identities=25%  Similarity=0.385  Sum_probs=209.7

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEc------
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETL------  228 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~------  228 (444)
                      .+|++.+.||+|+||.||+|.+..+|+.||||+++.    .......+.+.+|+.++++++||||+++++++..      
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~----~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ----ELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCS----CCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecc----cCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            579999999999999999999999999999998763    1344556788999999999999999999998765      


Q ss_pred             CCEEEEEEeccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCc---EEEEecc
Q 013354          229 DDKLYIYLEYVSGGSIYKILQDYG---QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGR---VKLADFG  302 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---vkL~DFG  302 (444)
                      .+..++||||+.+++|.+++....   .+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            677899999999999999998754   5899999999999999999999999999999999999987665   9999999


Q ss_pred             ccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH--------------H
Q 013354          303 MAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF--------------K  368 (444)
Q Consensus       303 la~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~--------------~  368 (444)
                      ++.............||+.|+|||++.+.. ++.++|||||||++|||++|..||........+.              .
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCSSCCSC-CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             cccccccccccccccCCcccCChHHhccCC-CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            999876665556677999999999997665 8999999999999999999999996532111100              0


Q ss_pred             hcC-----CC---CCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCC
Q 013354          369 IGN-----SK---ELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGN  415 (444)
Q Consensus       369 ~~~-----~~---~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~  415 (444)
                      ...     ..   ....+...++.++.+||.+||..||++|||+.|+++||||+.
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            000     00   011233446789999999999999999999999999999985


No 244
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.4e-42  Score=342.71  Aligned_cols=245  Identities=27%  Similarity=0.405  Sum_probs=200.9

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHc--cCCCCeeeEeeeEEcCC--
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSR--LRHPNIVRYYGSETLDD--  230 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~--l~hpnIv~l~~~~~~~~--  230 (444)
                      .+|++.+.||+|+||.||+|++  +++.||||++..     .   ..+.+.+|++++..  ++||||+++++++....  
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----R---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----G---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----h---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            5799999999999999999987  489999998852     1   12456678888877  78999999999998875  


Q ss_pred             --EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCcccCCCCCCceEECCCCcEEEEe
Q 013354          231 --KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLH--------AKNTVHRDIKGANILVDPSGRVKLAD  300 (444)
Q Consensus       231 --~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivH~Dlkp~NIll~~~~~vkL~D  300 (444)
                        .+++||||+.+++|.+++.+ ..+++..++.++.||+.||.|||        +++|+||||||+|||++.++.+||+|
T Consensus       112 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D  190 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  190 (342)
T ss_dssp             CCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECC
T ss_pred             cceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEE
Confidence              79999999999999999986 57999999999999999999999        89999999999999999999999999


Q ss_pred             ccccccccCCCC-----cccccCCCcccCcccccCcCC-----CChhhhHHHHHHHHHHHHcC----------CCCCCCC
Q 013354          301 FGMAKHITGQSC-----PLSIKGSPYWMAPEVIKNSNG-----CNLAVDIWSLGCTVIEMATT----------KPPWSQY  360 (444)
Q Consensus       301 FGla~~~~~~~~-----~~~~~gt~~y~APE~~~~~~~-----~s~~sDvwSlGvil~elltG----------~~Pf~~~  360 (444)
                      ||++........     .....||+.|+|||++.+...     ++.++|||||||++|||++|          ..||...
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            999987655432     234569999999999876532     33789999999999999999          7888664


Q ss_pred             CC----hhhh-HHhcCCCCCCCCCC-----CCCHHHHHHHHHHhhhCCCCCcCHHHHHhC
Q 013354          361 EG----VPAM-FKIGNSKELPAIPD-----HLSDEGKDFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       361 ~~----~~~~-~~~~~~~~~~~~~~-----~~s~~l~~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      ..    ...+ ..+......+.++.     .++..+.+||.+||+.||++|||+.|+++|
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          271 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             SCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            32    1222 22222223333332     344689999999999999999999999875


No 245
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.9e-42  Score=371.24  Aligned_cols=250  Identities=28%  Similarity=0.435  Sum_probs=211.4

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCC---CcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcC
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSES---GEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLD  229 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~---g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~  229 (444)
                      ...+|++.+.||+|+||.||+|++..+   +..||+|.++.    .......+.+.+|+.++++++||||+++++++. +
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN----CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSS----TTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecc----cCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            346899999999999999999998654   45788887653    234455678999999999999999999999985 4


Q ss_pred             CEEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccccc
Q 013354          230 DKLYIYLEYVSGGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHIT  308 (444)
Q Consensus       230 ~~~~lv~e~~~ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~  308 (444)
                      +..++||||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            56899999999999999998654 58999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCc--ccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHc-CCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHH
Q 013354          309 GQSCP--LSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMAT-TKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDE  385 (444)
Q Consensus       309 ~~~~~--~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~  385 (444)
                      .....  ....+++.|+|||++.... ++.++|||||||++|||++ |..||...........+...... .++..++.+
T Consensus       543 ~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~  620 (656)
T 2j0j_A          543 DSTYYKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-PMPPNCPPT  620 (656)
T ss_dssp             C----------CCGGGCCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC-CCCTTCCHH
T ss_pred             CCcceeccCCCCCcceeCHHHhcCCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC-CCCccccHH
Confidence            43322  2234678999999997655 8999999999999999997 99999887766666666554443 567889999


Q ss_pred             HHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          386 GKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       386 l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      +.+||.+||+.||++|||+.++++
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999876


No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.2e-41  Score=329.22  Aligned_cols=226  Identities=15%  Similarity=0.132  Sum_probs=189.6

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKL  232 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~  232 (444)
                      ...+|++.+.||+|+||.||+|++..+++.||||++...  .....+..+.+.+|+.++.+++|+||+++++++..++..
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~  106 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQ--GVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGG  106 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTT--CCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcc--cccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcE
Confidence            446899999999999999999999999999999988642  223355668899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC  312 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~  312 (444)
                      |+||||++|++|.+++++  ......+..++.||+.||+|||++||+||||||+|||++.++.+||++++          
T Consensus       107 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~----------  174 (286)
T 3uqc_A          107 LVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA----------  174 (286)
T ss_dssp             EEEEECCCEEEHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred             EEEEEecCCCCHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence            999999999999999964  34666788999999999999999999999999999999999999997543          


Q ss_pred             cccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhH---HhcCCCCC--CCCCCCCCHHHH
Q 013354          313 PLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMF---KIGNSKEL--PAIPDHLSDEGK  387 (444)
Q Consensus       313 ~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~---~~~~~~~~--~~~~~~~s~~l~  387 (444)
                               |++|        ++.++|||||||++|||++|+.||........+.   +.......  ..+...+++++.
T Consensus       175 ---------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (286)
T 3uqc_A          175 ---------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS  237 (286)
T ss_dssp             ---------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHH
T ss_pred             ---------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHH
Confidence                     3332        6889999999999999999999998755433221   11111111  123467899999


Q ss_pred             HHHHHHhhhCCCCCcCHHHHHhC
Q 013354          388 DFVRKCLQRNPLHRPTAAWLLEH  410 (444)
Q Consensus       388 ~Li~~~L~~dP~~Rpt~~elL~h  410 (444)
                      +||.+||++||++| |+.|+++.
T Consensus       238 ~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          238 AVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHHHHcccCCccC-CHHHHHHH
Confidence            99999999999999 99998874


No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=4.2e-43  Score=356.90  Aligned_cols=250  Identities=17%  Similarity=0.155  Sum_probs=194.6

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC-CCe--------------
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH-PNI--------------  219 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-pnI--------------  219 (444)
                      ..|+.+++||+|+||+||+|++..+|+.||||++.....  ......+.+.+|+.+++.++| .|+              
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC--ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            458999999999999999999999999999998863222  222335678899999999977 221              


Q ss_pred             -eeE------eeeEEc-----CCEEEEEEeccCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 013354          220 -VRY------YGSETL-----DDKLYIYLEYVSGGSIYKILQDY-------GQLGESAIRSYTQQILSGLEYLHAKNTVH  280 (444)
Q Consensus       220 -v~l------~~~~~~-----~~~~~lv~e~~~ggsL~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  280 (444)
                       +.+      +.++..     ...++++|+++ +++|.++++..       ..+++..++.++.||+.||+|||++||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence             111      111111     22467788876 68999998521       23778889999999999999999999999


Q ss_pred             CCCCCCceEECCCCcEEEEeccccccccCCCCcccccCCCcccCccccc---------CcCCCChhhhHHHHHHHHHHHH
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIK---------NSNGCNLAVDIWSLGCTVIEMA  351 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~---------~~~~~s~~sDvwSlGvil~ell  351 (444)
                      |||||+||||+.++.+||+|||+++.....  .....| +.|+|||++.         ....++.++|||||||++|||+
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999999998865433  344567 9999999983         2333889999999999999999


Q ss_pred             cCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhhCCCCCcCHHHHHhCCCCCCC
Q 013354          352 TTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQRNPLHRPTAAWLLEHPFVGNA  416 (444)
Q Consensus       352 tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt~~elL~hp~~~~~  416 (444)
                      +|+.||...........+..      ....+++++++||.+||+.||++||++.++++||||++.
T Consensus       312 tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          312 CADLPNTDDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HSSCCCCTTGGGSCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HCCCCCCCcchhhhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            99999976554333333322      123578999999999999999999999999999999753


No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.3e-44  Score=350.58  Aligned_cols=245  Identities=26%  Similarity=0.381  Sum_probs=184.8

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHc--cCCCCeeeEeeeEEcCC-
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSR--LRHPNIVRYYGSETLDD-  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~--l~hpnIv~l~~~~~~~~-  230 (444)
                      ..+|++.+.||+|+||.||+|++  +++.||+|++..     .   ....+.+|.+++..  ++||||+++++++.... 
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~   71 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----R---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC------T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS
T ss_pred             cceeeehhhccCCCCeEEEEEEE--cCcceEEEEecc-----c---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC
Confidence            35799999999999999999965  489999998752     1   12456677888877  79999999999988776 


Q ss_pred             ---EEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCcccCCCCCCceEECCCCcEEEE
Q 013354          231 ---KLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLH--------AKNTVHRDIKGANILVDPSGRVKLA  299 (444)
Q Consensus       231 ---~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivH~Dlkp~NIll~~~~~vkL~  299 (444)
                         .+++||||+.+++|.+++++ ..+++..++.++.||+.||.|||        +++|+||||||+|||++.++.+||+
T Consensus        72 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           72 TWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             SSEEEEEEEECCTTCCHHHHHHH-CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             ccceeEEEEeccCCCCHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence               79999999999999999976 47888999999999999999999        9999999999999999999999999


Q ss_pred             eccccccccCCCCc-----ccccCCCcccCcccccCcCC-----CChhhhHHHHHHHHHHHHcC----------CCCCCC
Q 013354          300 DFGMAKHITGQSCP-----LSIKGSPYWMAPEVIKNSNG-----CNLAVDIWSLGCTVIEMATT----------KPPWSQ  359 (444)
Q Consensus       300 DFGla~~~~~~~~~-----~~~~gt~~y~APE~~~~~~~-----~s~~sDvwSlGvil~elltG----------~~Pf~~  359 (444)
                      |||++.........     ....||+.|+|||++.+...     ++.++|||||||++|||++|          ..||..
T Consensus       151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred             ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence            99999766544322     23369999999999876532     34689999999999999999          777754


Q ss_pred             CCCh-----hhhHHhcCCCCCCCCCC-----CCCHHHHHHHHHHhhhCCCCCcCHHHHHh
Q 013354          360 YEGV-----PAMFKIGNSKELPAIPD-----HLSDEGKDFVRKCLQRNPLHRPTAAWLLE  409 (444)
Q Consensus       360 ~~~~-----~~~~~~~~~~~~~~~~~-----~~s~~l~~Li~~~L~~dP~~Rpt~~elL~  409 (444)
                      ....     .....+......+.++.     .++.++.+||.+||+.||++|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             TCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            3211     11222222233333333     23458999999999999999999999886


No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=5.3e-44  Score=352.95  Aligned_cols=247  Identities=18%  Similarity=0.246  Sum_probs=191.9

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc---cccHHHHHHHHHHHHHHHccC---------CCCeee
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD---AKSKESAQQLGQEIALLSRLR---------HPNIVR  221 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~---~~~~~~~~~~~~Ei~~l~~l~---------hpnIv~  221 (444)
                      ..+|++.+.||+|+||+||+|++  +|+.||||++......   .......+.+.+|+.+++.++         |+||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            45799999999999999999988  6899999999864321   012223456778888888885         777776


Q ss_pred             EeeeE-----------------Ec-------------CCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 013354          222 YYGSE-----------------TL-------------DDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLE  271 (444)
Q Consensus       222 l~~~~-----------------~~-------------~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~  271 (444)
                      +.+++                 ..             .+.+|+||||+.+|++.+.+.+ ..+++..++.++.||+.||+
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence            66653                 22             6789999999999976666644 57899999999999999999


Q ss_pred             HHH-HCCcccCCCCCCceEECCCC--------------------cEEEEeccccccccCCCCcccccCCCcccCcccccC
Q 013354          272 YLH-AKNTVHRDIKGANILVDPSG--------------------RVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKN  330 (444)
Q Consensus       272 ~LH-~~~ivH~Dlkp~NIll~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~  330 (444)
                      ||| ++||+||||||+||||+.++                    .+||+|||+++.....    ...||+.|+|||++.+
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g  251 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG  251 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred             HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence            999 99999999999999998887                    8999999999877543    3469999999999975


Q ss_pred             cCCCChhhhHHHHHHH-HHHHHcCCCCCCCCCChh-hhHHhcCC-----CCCCCCCCCCCHHHHHHHHHHhhhCCCCCcC
Q 013354          331 SNGCNLAVDIWSLGCT-VIEMATTKPPWSQYEGVP-AMFKIGNS-----KELPAIPDHLSDEGKDFVRKCLQRNPLHRPT  403 (444)
Q Consensus       331 ~~~~s~~sDvwSlGvi-l~elltG~~Pf~~~~~~~-~~~~~~~~-----~~~~~~~~~~s~~l~~Li~~~L~~dP~~Rpt  403 (444)
                      ..  +.++|||||+++ .++++.|..||....... ....+...     ......+..+++++++||++||++|     |
T Consensus       252 ~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s  324 (336)
T 2vuw_A          252 DG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S  324 (336)
T ss_dssp             CS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S
T ss_pred             CC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----C
Confidence            54  889999998777 778888999985321100 11111111     1111123357899999999999977     9


Q ss_pred             HHHHH-hCCCCC
Q 013354          404 AAWLL-EHPFVG  414 (444)
Q Consensus       404 ~~elL-~hp~~~  414 (444)
                      ++|+| +||||+
T Consensus       325 a~e~l~~Hp~f~  336 (336)
T 2vuw_A          325 ATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHCGGGC
T ss_pred             HHHHHhcCCCcC
Confidence            99999 999995


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.5e-41  Score=366.33  Aligned_cols=242  Identities=24%  Similarity=0.370  Sum_probs=200.3

Q ss_pred             CCCCeeeeeeecccCceEEEEEEEcC-CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCE
Q 013354          153 PGSRWKKGRLLGRGTFGHVYLGFNSE-SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDK  231 (444)
Q Consensus       153 ~~~~~~~~~~LG~G~fg~Vy~a~~~~-~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~  231 (444)
                      ...+|++.+.||+|+||+||+|++.. +++.||||++..    .......+.+.+|+.++++++||||+++++++...+.
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  153 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVH----SGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR  153 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCS----SCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCc----cCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC
Confidence            34689999999999999999999976 789999998753    2334556788899999999999999999999887654


Q ss_pred             -----EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          232 -----LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       232 -----~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                           .|+||||+.|++|.+++..  .+++..++.++.||+.||.|||++|||||||||+|||++.+ .+||+|||+++.
T Consensus       154 ~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          154 HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence                 7999999999999998765  79999999999999999999999999999999999999875 899999999987


Q ss_pred             ccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHH
Q 013354          307 ITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEG  386 (444)
Q Consensus       307 ~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  386 (444)
                      ....   ....||+.|+|||++.+.  ++.++|||||||++|+|++|..||.......        ..........+.++
T Consensus       231 ~~~~---~~~~gt~~y~aPE~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~~l  297 (681)
T 2pzi_A          231 INSF---GYLYGTPGFQAPEIVRTG--PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------LPEDDPVLKTYDSY  297 (681)
T ss_dssp             TTCC---SCCCCCTTTSCTTHHHHC--SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------CCTTCHHHHHCHHH
T ss_pred             cccC---CccCCCccccCHHHHcCC--CCCceehhhhHHHHHHHHhCCCCCccccccc--------ccccccccccCHHH
Confidence            6543   345699999999998654  4899999999999999999999886421100        00000011246789


Q ss_pred             HHHHHHHhhhCCCCCcCHHHHHhCCCCC
Q 013354          387 KDFVRKCLQRNPLHRPTAAWLLEHPFVG  414 (444)
Q Consensus       387 ~~Li~~~L~~dP~~Rpt~~elL~hp~~~  414 (444)
                      .+||.+||++||++||+..+.+.|+|+.
T Consensus       298 ~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          298 GRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            9999999999999999999988888874


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=8.3e-35  Score=306.86  Aligned_cols=189  Identities=15%  Similarity=0.099  Sum_probs=138.5

Q ss_pred             eecccCceEEEEEEEcCCCcEEEEEEEeeccc-----ccccHHHHHHHHHHHHHHHcc-CCCCeeeEeeeEEcCCEEEEE
Q 013354          162 LLGRGTFGHVYLGFNSESGEMCAMKEVTLFSD-----DAKSKESAQQLGQEIALLSRL-RHPNIVRYYGSETLDDKLYIY  235 (444)
Q Consensus       162 ~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~-----~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv  235 (444)
                      .++.|++|.+..++....|+.|++|++.....     ....+...+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            46788888888888888899999999875321     122344557899999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCC-Ccc
Q 013354          236 LEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQS-CPL  314 (444)
Q Consensus       236 ~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~-~~~  314 (444)
                      ||||+|++|.++|.+.+.+++.   +|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+...... ...
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~  397 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT  397 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred             EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence            9999999999999998888875   478999999999999999999999999999999999999999998765433 334


Q ss_pred             cccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCC
Q 013354          315 SIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKP  355 (444)
Q Consensus       315 ~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~  355 (444)
                      +.+||+.|+|||++.+.  +..++|+|++|+++++|.++..
T Consensus       398 t~vGTp~YmAPE~l~g~--~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          398 NLVQSFFVFVNELFAEN--KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             HHHHHHHHHHHHHC-------------------CCCCTTHH
T ss_pred             CceechhhccHHHhCCC--CCCcccccccccchhhhccccc
Confidence            56799999999999754  5678999999999888766543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95  E-value=6.1e-29  Score=260.58  Aligned_cols=189  Identities=16%  Similarity=0.185  Sum_probs=146.0

Q ss_pred             eeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc---cccHHHHHHHHHHHHHHHccCCCCeeeEeeeEEcCCEEEE
Q 013354          158 KKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD---AKSKESAQQLGQEIALLSRLRHPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       158 ~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~---~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l  234 (444)
                      ...++||+|+||.||+|  ...++.+++|........   .......+++.+|+.++++++||||+++..++...+..|+
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            45678999999999999  345788999986542211   1222335678999999999999999955555556667799


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEeccccccccCCCC--
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSC--  312 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~--  312 (444)
                      ||||+++++|.+++.+        ++.++.||+.||+|||++||+||||||+|||++.  .+||+|||+++.......  
T Consensus       417 VmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~  486 (540)
T 3en9_A          417 MMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA  486 (540)
T ss_dssp             EEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred             EEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence            9999999999999876        5689999999999999999999999999999998  999999999998755322  


Q ss_pred             ------cccccCCCcccCcccccCc-CCCChhhhHHHHHHHHHHHHcCCCCCC
Q 013354          313 ------PLSIKGSPYWMAPEVIKNS-NGCNLAVDIWSLGCTVIEMATTKPPWS  358 (444)
Q Consensus       313 ------~~~~~gt~~y~APE~~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~  358 (444)
                            .....||+.|+|||++... ..|+..+|+|+..+-.++.+.++.+|.
T Consensus       487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence                  1245699999999999751 237788999999998888887776663


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.92  E-value=1.7e-25  Score=215.58  Aligned_cols=150  Identities=17%  Similarity=0.229  Sum_probs=118.1

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccc----cH---------HHHHHHHHHHHHHHccCCCCeee
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAK----SK---------ESAQQLGQEIALLSRLRHPNIVR  221 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~----~~---------~~~~~~~~Ei~~l~~l~hpnIv~  221 (444)
                      ..|.+++.||+|+||.||+|.+ .+|+.||+|+++.......    ..         .....+.+|+.+|++++  | ++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~  165 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA  165 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence            3455669999999999999999 7899999999864221100    00         24567889999999998  4 66


Q ss_pred             EeeeEEcCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCCcEEEEec
Q 013354          222 YYGSETLDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSGRVKLADF  301 (444)
Q Consensus       222 l~~~~~~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~vkL~DF  301 (444)
                      +.+++.. +..++||||++|++|.+ +.    .  .....++.||+.||.|||++||+||||||+|||++ ++.+||+||
T Consensus       166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DF  236 (282)
T 1zar_A          166 VPKVYAW-EGNAVLMELIDAKELYR-VR----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDF  236 (282)
T ss_dssp             SCCEEEE-ETTEEEEECCCCEEGGG-CC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred             cCeEEec-cceEEEEEecCCCcHHH-cc----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence            6665544 44699999999999988 42    1  23557999999999999999999999999999999 999999999


Q ss_pred             cccccccCCCCcccccCCCcccCccccc
Q 013354          302 GMAKHITGQSCPLSIKGSPYWMAPEVIK  329 (444)
Q Consensus       302 Gla~~~~~~~~~~~~~gt~~y~APE~~~  329 (444)
                      |+++..            ..|+|||++.
T Consensus       237 G~a~~~------------~~~~a~e~l~  252 (282)
T 1zar_A          237 PQSVEV------------GEEGWREILE  252 (282)
T ss_dssp             TTCEET------------TSTTHHHHHH
T ss_pred             CCCeEC------------CCCCHHHHHH
Confidence            998743            3478899874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.85  E-value=1.3e-21  Score=185.88  Aligned_cols=144  Identities=17%  Similarity=0.230  Sum_probs=111.0

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcE--EEEEEEeecccccc-------------------cHHHHHHHHHHHHHHHc
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEM--CAMKEVTLFSDDAK-------------------SKESAQQLGQEIALLSR  213 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~--vaiK~i~~~~~~~~-------------------~~~~~~~~~~Ei~~l~~  213 (444)
                      .-|.+.+.||+|+||.||+|.+..+|+.  ||||+++.......                   .......+.+|+.+|..
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3478899999999999999998778999  99998754211100                   11223467889999999


Q ss_pred             cCCCCe--eeEeeeEEcCCEEEEEEeccCC-C----CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCC
Q 013354          214 LRHPNI--VRYYGSETLDDKLYIYLEYVSG-G----SIYKILQDYGQLGESAIRSYTQQILSGLEYLH-AKNTVHRDIKG  285 (444)
Q Consensus       214 l~hpnI--v~l~~~~~~~~~~~lv~e~~~g-g----sL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp  285 (444)
                      +.|++|  +.+++.    ...++||||+.+ |    +|.++...   .++..+..++.||+.+|.||| ++||+||||||
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp  199 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSE  199 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            988754  344432    246899999942 3    77776533   335567889999999999999 99999999999


Q ss_pred             CceEECCCCcEEEEeccccccc
Q 013354          286 ANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       286 ~NIll~~~~~vkL~DFGla~~~  307 (444)
                      +|||++.  .++|+|||++...
T Consensus       200 ~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          200 YNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSEEESS--SEEECCCTTCEET
T ss_pred             HHEEEcC--cEEEEECcccccC
Confidence            9999988  8999999999765


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73  E-value=3.8e-18  Score=169.84  Aligned_cols=144  Identities=14%  Similarity=0.109  Sum_probs=102.2

Q ss_pred             CCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccc------------cccH-HH----HHHHHHHHHHHHccCCC
Q 013354          155 SRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDD------------AKSK-ES----AQQLGQEIALLSRLRHP  217 (444)
Q Consensus       155 ~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~------------~~~~-~~----~~~~~~Ei~~l~~l~hp  217 (444)
                      .-|++++.||+|+||.||+|.+. +|+.||||+++.....            .... ..    .....+|...|.++.+.
T Consensus        95 ~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           95 DVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             SCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            45899999999999999999875 5999999987632110            0000 11    11123577777777554


Q ss_pred             CeeeEeeeEEcCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCCC---
Q 013354          218 NIVRYYGSETLDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPSG---  294 (444)
Q Consensus       218 nIv~l~~~~~~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---  294 (444)
                      ++.-..-+....  .+|||||++|.+|.++..      ......++.||+.+|.+||++|||||||||.|||+++++   
T Consensus       174 gv~vp~p~~~~~--~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~  245 (397)
T 4gyi_A          174 GFPVPEPIAQSR--HTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAE  245 (397)
T ss_dssp             TCSCCCEEEEET--TEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSS
T ss_pred             CCCCCeeeeccC--ceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcc
Confidence            432211111222  379999999988865432      234567889999999999999999999999999998776   


Q ss_pred             -------cEEEEeccccccc
Q 013354          295 -------RVKLADFGMAKHI  307 (444)
Q Consensus       295 -------~vkL~DFGla~~~  307 (444)
                             .+.|+||+.+...
T Consensus       246 d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          246 DPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             CTTSEEEEEEECCCTTCEET
T ss_pred             cccccccceEEEEeCCcccC
Confidence                   3899999977654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.39  E-value=8.1e-13  Score=124.77  Aligned_cols=138  Identities=13%  Similarity=0.098  Sum_probs=108.4

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEEcCCEEEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSETLDDKLYI  234 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~l  234 (444)
                      .|++...++.|+++.||++..  .++.+++|+......     .....+.+|+.+++.+. +..+.++++++...+..|+
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK-----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT-----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC-----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            588888899999999999864  368899998753110     11235778999999884 6678889999888899999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHA---------------------------------------  275 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---------------------------------------  275 (444)
                      ||||++|.+|.+.+.     +......++.+++.+|+.||+                                       
T Consensus        88 v~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT  162 (263)
T ss_dssp             EEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred             EEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence            999999999987631     122344678899999999998                                       


Q ss_pred             --------------------CCcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          276 --------------------KNTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       276 --------------------~~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                                          ..++|+|+++.||+++++..+.|+||+.+.
T Consensus       163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                348999999999999876556799998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.23  E-value=1.7e-11  Score=114.82  Aligned_cols=134  Identities=16%  Similarity=0.102  Sum_probs=96.9

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC--eeeEeeeEEcCCEEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN--IVRYYGSETLDDKLY  233 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn--Iv~l~~~~~~~~~~~  233 (444)
                      .+.+..+.+.|..+.||++.. .+|+.+++|+....        ....+.+|+.+++.+.+.+  +.+++++....+..+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~   91 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   91 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence            455544445666799999853 45788999986521        1135677888888885444  566888888778899


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------------------
Q 013354          234 IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKN------------------------------------  277 (444)
Q Consensus       234 lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~------------------------------------  277 (444)
                      +||||++|.+|.  .   .....   ..++.+++..|..||+..                                    
T Consensus        92 ~v~e~i~G~~l~--~---~~~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           92 LLLGEVPGQDLL--S---SHLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             EEEECCSSEETT--T---SCCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             EEEEecCCcccC--c---CcCCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            999999998884  1   11221   245667777777777643                                    


Q ss_pred             ----------------------cccCCCCCCceEECCCCcEEEEecccccc
Q 013354          278 ----------------------TVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       278 ----------------------ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                                            ++|+|++|.||+++.++.+.|+||+.+..
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                  99999999999998776677999997653


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.14  E-value=7.3e-11  Score=116.73  Aligned_cols=140  Identities=14%  Similarity=0.251  Sum_probs=103.7

Q ss_pred             eeeeecccCceEEEEEEEcCCCcEEEEEEEe--ecccccccHHHHHHHHHHHHHHHccC--CCCeeeEeeeEEcC---CE
Q 013354          159 KGRLLGRGTFGHVYLGFNSESGEMCAMKEVT--LFSDDAKSKESAQQLGQEIALLSRLR--HPNIVRYYGSETLD---DK  231 (444)
Q Consensus       159 ~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~--~~~~~~~~~~~~~~~~~Ei~~l~~l~--hpnIv~l~~~~~~~---~~  231 (444)
                      ..+.|+.|.++.||+....  +..+++|+..  ..    ........+.+|+.+++.+.  +..+++++.++...   +.
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~----~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~  115 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKS----KLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR  115 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCC----CCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence            3567899999999998653  4678888653  11    11122356788999999997  34578888887765   45


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 013354          232 LYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHA------------------------------------  275 (444)
Q Consensus       232 ~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~------------------------------------  275 (444)
                      .|+||||++|..+.+..  ...++......++.+++..|..||+                                    
T Consensus       116 ~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             CEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             eEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            88999999988775421  2347788888999999999999997                                    


Q ss_pred             ----------------------CCcccCCCCCCceEECCCCc--EEEEecccccc
Q 013354          276 ----------------------KNTVHRDIKGANILVDPSGR--VKLADFGMAKH  306 (444)
Q Consensus       276 ----------------------~~ivH~Dlkp~NIll~~~~~--vkL~DFGla~~  306 (444)
                                            ..++|||+++.|||++.++.  +.|+||+.+..
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                  35899999999999987753  69999998864


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.05  E-value=1.4e-10  Score=112.13  Aligned_cols=180  Identities=17%  Similarity=0.205  Sum_probs=121.0

Q ss_pred             eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCC--eeeEeeeEEcCC---EEEE
Q 013354          161 RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPN--IVRYYGSETLDD---KLYI  234 (444)
Q Consensus       161 ~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpn--Iv~l~~~~~~~~---~~~l  234 (444)
                      +.++.|....||+.     +..+++|+..       .......+.+|+.+|+.+. +..  +.+++......+   ..|+
T Consensus        26 ~~~~~G~~n~v~~v-----~~~~vlR~~~-------~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~   93 (304)
T 3sg8_A           26 EISGEGNDCIAYEI-----NRDFIFKFPK-------HSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA   93 (304)
T ss_dssp             CEEEECSSEEEEES-----TTSEEEEEES-------SHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred             EecCCCCcceEEEE-----CCEEEEEecC-------CcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence            55899999999986     2568888753       1234567889999998873 322  344444433332   3488


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 013354          235 YLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHA---------------------------------------  275 (444)
Q Consensus       235 v~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---------------------------------------  275 (444)
                      ||++++|.+|.+...  ..++..+...++.+++..|+.||+                                       
T Consensus        94 vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           94 GFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             EEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             EEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            999999998876443  257788888888899988888886                                       


Q ss_pred             -------------------CCcccCCCCCCceEECC--CCcEEEEeccccccccCCCCccccc-----CCC--------c
Q 013354          276 -------------------KNTVHRDIKGANILVDP--SGRVKLADFGMAKHITGQSCPLSIK-----GSP--------Y  321 (444)
Q Consensus       276 -------------------~~ivH~Dlkp~NIll~~--~~~vkL~DFGla~~~~~~~~~~~~~-----gt~--------~  321 (444)
                                         ..++|+|+++.||+++.  +..+.|+||+.+..-..........     ...        .
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~  251 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH  251 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence                               13699999999999987  4568899999886532211000000     000        0


Q ss_pred             c--cC-cccccCcCCCChhhhHHHHHHHHHHHHcCCCCC
Q 013354          322 W--MA-PEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPW  357 (444)
Q Consensus       322 y--~A-PE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf  357 (444)
                      |  .. |+....   .....+.|+++.++|.+.+|..+|
T Consensus       252 Y~~~~~~~~~~r---~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          252 YKHKDIPTVLEK---YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HTCSCHHHHHHH---HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCCCCcHHHHHH---HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            1  11 222111   123468999999999999998776


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.87  E-value=9.1e-09  Score=100.09  Aligned_cols=133  Identities=19%  Similarity=0.188  Sum_probs=99.4

Q ss_pred             eeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC----CCeeeEeeeEEcCCEE
Q 013354          157 WKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH----PNIVRYYGSETLDDKL  232 (444)
Q Consensus       157 ~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h----pnIv~l~~~~~~~~~~  232 (444)
                      ....+.++.|....||+.     +..+++|+..       .......+.+|..+++.+.+    -.+.++++.    +..
T Consensus        39 i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~-------~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~  102 (320)
T 3r70_A           39 INELRYLSSGDDSDTFLC-----NEQYVVKVPK-------RDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDR  102 (320)
T ss_dssp             CSCEEEEEECSSEEEEEE-----TTTEEEEEES-------SHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSS
T ss_pred             eEEEEeCCCCCCceEEEE-----CCEEEEEeCC-------cHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCc
Confidence            344577899999999998     6678888653       22233568889999888865    224455544    456


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
Q 013354          233 YIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKN-----------------------------------  277 (444)
Q Consensus       233 ~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-----------------------------------  277 (444)
                      ++||||++|.+|.+...  ..++......++.+++..|+.||+..                                   
T Consensus       103 ~lvme~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (320)
T 3r70_A          103 FNIMKYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL  180 (320)
T ss_dssp             CEEEECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence            89999999998874432  35677777788888888888888432                                   


Q ss_pred             ----------------------------cccCCCCCCceEECCCCcEEEEeccccccc
Q 013354          278 ----------------------------TVHRDIKGANILVDPSGRVKLADFGMAKHI  307 (444)
Q Consensus       278 ----------------------------ivH~Dlkp~NIll~~~~~vkL~DFGla~~~  307 (444)
                                                  ++|+|+++.||+++.+..+.|+||+.+..-
T Consensus       181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                        389999999999998666799999988643


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.72  E-value=1.7e-07  Score=90.50  Aligned_cols=134  Identities=22%  Similarity=0.189  Sum_probs=94.9

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCC---CeeeEeeeEE-cCCEEEEE
Q 013354          160 GRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHP---NIVRYYGSET-LDDKLYIY  235 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hp---nIv~l~~~~~-~~~~~~lv  235 (444)
                      .+.++.|....||+.     +..+++|+..       .......+.+|+.+|+.+.+.   .+.+.+.++. ..+..++|
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v   91 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK-------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVG   91 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES-------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC-------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEE
Confidence            456888998999987     5678888642       223456788999999999652   3556666654 45667899


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 013354          236 LEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAK---------------------------------------  276 (444)
Q Consensus       236 ~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------------------------------------  276 (444)
                      ||+++|.+|.+..-  ..++......++.++...|+.||+.                                       
T Consensus        92 ~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           92 YRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             EECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             EeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            99999988876422  2345555555555555555555542                                       


Q ss_pred             ---------------------CcccCCCCCCceEECC---CCc-EEEEeccccccc
Q 013354          277 ---------------------NTVHRDIKGANILVDP---SGR-VKLADFGMAKHI  307 (444)
Q Consensus       277 ---------------------~ivH~Dlkp~NIll~~---~~~-vkL~DFGla~~~  307 (444)
                                           .++|+|+++.||+++.   ++. +.|+||+.+..-
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                                 3589999999999987   455 589999987643


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.66  E-value=2.3e-07  Score=87.42  Aligned_cols=132  Identities=16%  Similarity=0.199  Sum_probs=95.7

Q ss_pred             ecccCce-EEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC-CCCeeeEeeeEEcCCEEEEEEeccC
Q 013354          163 LGRGTFG-HVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR-HPNIVRYYGSETLDDKLYIYLEYVS  240 (444)
Q Consensus       163 LG~G~fg-~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~  240 (444)
                      +..|..+ .||+......+..+++|+-..        .....+.+|...|+.+. +--+.+++.++...+..++|||+++
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~--------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~  103 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG--------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP  103 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET--------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC--------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence            3445444 699987777778899997541        13456788999998884 3336778888888899999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------------
Q 013354          241 GGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHA---------------------------------------------  275 (444)
Q Consensus       241 ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---------------------------------------------  275 (444)
                      |.++.+.....    ......+..++...|..||.                                             
T Consensus       104 G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          104 GKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             SEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             CccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            99888766431    12233455566666666663                                             


Q ss_pred             ------C-------CcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          276 ------K-------NTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       276 ------~-------~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                            .       .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                  0       278999999999999877778999987753


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.41  E-value=8.5e-07  Score=87.74  Aligned_cols=75  Identities=8%  Similarity=0.039  Sum_probs=54.7

Q ss_pred             eeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC--eeeEeeeEEcC-CEEEE
Q 013354          158 KKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN--IVRYYGSETLD-DKLYI  234 (444)
Q Consensus       158 ~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn--Iv~l~~~~~~~-~~~~l  234 (444)
                      ...+.|+.|....||+...  +++.+++|+...      .    ..+.+|+.+++.+....  +.+++.++... +..|+
T Consensus        44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~------~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~l  111 (362)
T 3ovc_A           44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSC------A----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYC  111 (362)
T ss_dssp             EEEEEEEECSSEEEEEEEE--TTEEEEEEEESC------C----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEE
T ss_pred             ceEEECCCCCcceEEEEEE--CCcEEEEEeCCc------h----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEE
Confidence            3456789999999999864  478899997631      1    14778888888886433  45677666654 67899


Q ss_pred             EEeccCCCCH
Q 013354          235 YLEYVSGGSI  244 (444)
Q Consensus       235 v~e~~~ggsL  244 (444)
                      ||||++|.+|
T Consensus       112 v~e~l~G~~l  121 (362)
T 3ovc_A          112 ISRRAQGVTL  121 (362)
T ss_dssp             EEECCCSEET
T ss_pred             EEEecCCCCc
Confidence            9999987655


No 264
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33  E-value=1e-06  Score=84.30  Aligned_cols=79  Identities=14%  Similarity=0.019  Sum_probs=57.7

Q ss_pred             CeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCC---CeeeEeeeEEcCCEE
Q 013354          156 RWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHP---NIVRYYGSETLDDKL  232 (444)
Q Consensus       156 ~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hp---nIv~l~~~~~~~~~~  232 (444)
                      .....+.|+.|.++.||++... +|+.+++|+.....     ......+.+|++.|+.|.+.   .+++++++.    ..
T Consensus        16 ~~~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~   85 (288)
T 3d1u_A           16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDA-----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DR   85 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTC-----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TT
T ss_pred             CccceeeeCCcchhheEEEEeC-CCCeEEEEecCCCC-----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----Cc
Confidence            3455678999999999999764 58889999753211     11124578899999999765   577777653    25


Q ss_pred             EEEEeccCCCCH
Q 013354          233 YIYLEYVSGGSI  244 (444)
Q Consensus       233 ~lv~e~~~ggsL  244 (444)
                      ++||||++|.++
T Consensus        86 ~lvme~l~g~~~   97 (288)
T 3d1u_A           86 TLAMEWVDERPP   97 (288)
T ss_dssp             EEEEECCCCCCC
T ss_pred             EEEEEecccCCC
Confidence            899999998874


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.25  E-value=1.2e-06  Score=87.39  Aligned_cols=81  Identities=16%  Similarity=0.174  Sum_probs=48.1

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEEeeccccccc--HHHHHHHHHHHHHHHccCC--C-CeeeEeeeEEcCCEEEE
Q 013354          160 GRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKS--KESAQQLGQEIALLSRLRH--P-NIVRYYGSETLDDKLYI  234 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h--p-nIv~l~~~~~~~~~~~l  234 (444)
                      .+.||.|.++.||++....+++.+++|...........  .....++..|.++++.+..  + .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            46799999999999976656788999976421100000  0112345678888877632  3 34456543  2344579


Q ss_pred             EEeccCCC
Q 013354          235 YLEYVSGG  242 (444)
Q Consensus       235 v~e~~~gg  242 (444)
                      |||++.+.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.17  E-value=2.4e-05  Score=75.72  Aligned_cols=30  Identities=20%  Similarity=0.323  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          276 KNTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       276 ~~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      ..++|+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            479999999999999878889999999764


No 267
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08  E-value=1.1e-06  Score=86.29  Aligned_cols=86  Identities=10%  Similarity=0.060  Sum_probs=53.0

Q ss_pred             eeeeeee-cccCceEEEEEEEc--C----CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC---CCeeeEeeeE
Q 013354          157 WKKGRLL-GRGTFGHVYLGFNS--E----SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH---PNIVRYYGSE  226 (444)
Q Consensus       157 ~~~~~~L-G~G~fg~Vy~a~~~--~----~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h---pnIv~l~~~~  226 (444)
                      ....+.| +.|....+|+....  .    +++.+++|+.........  .....+.+|+.+++.+..   -.+.+++.++
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~--~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~   99 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPV--FPTYRLDHQFEVIRLVGELTDVPVPRVRWIE   99 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCS--SSCCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcccc--CchhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence            4445778 88989999988653  1    156788886542110000  001345667777777742   3466777766


Q ss_pred             EcC---CEEEEEEeccCCCCH
Q 013354          227 TLD---DKLYIYLEYVSGGSI  244 (444)
Q Consensus       227 ~~~---~~~~lv~e~~~ggsL  244 (444)
                      ...   +..++||||++|..+
T Consensus       100 ~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          100 TTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             CSSTTTSSCEEEEECCCCBCC
T ss_pred             cCCCccCCceEEEEecCCCCh
Confidence            554   356899999987654


No 268
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.95  E-value=0.00012  Score=66.33  Aligned_cols=137  Identities=19%  Similarity=0.116  Sum_probs=93.0

Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCCCceEECCCCcEEEEeccccccccCCCCcccccC
Q 013354          241 GGSIYKILQDYG-QLGESAIRSYTQQILSGLEYLHA-KNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCPLSIKG  318 (444)
Q Consensus       241 ggsL~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~g  318 (444)
                      ..+|.++|+.++ +++|+++|.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.|.+.+ ..+.           ..
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------~~   99 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-----------AG   99 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-----------cc
Confidence            347999998764 69999999999999999887632 2212333456889999999988763 1110           02


Q ss_pred             CCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCCCCCChhhhHHhcCCCCCCCCCCCCCHHHHHHHHHHhhh--
Q 013354          319 SPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWSQYEGVPAMFKIGNSKELPAIPDHLSDEGKDFVRKCLQR--  396 (444)
Q Consensus       319 t~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~Li~~~L~~--  396 (444)
                      ...+.|||...  ...+.+.=|||||++||..+--..|                   +..+..+|+.+..||..|..-  
T Consensus       100 ~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~-------------------e~eE~eLS~~LE~LL~~Mt~~~~  158 (229)
T 2yle_A          100 EPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK-------------------ENEERELSPPLEQLIDHMANTVE  158 (229)
T ss_dssp             -------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC-------------------TTEEECCCHHHHHHHHHHTTCCC
T ss_pred             ccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC-------------------cccchhhCHHHHHHHHHHHhccc
Confidence            23467898863  2357899999999999999973322                   133456899999999999765  


Q ss_pred             -----------------------CCCCCcCHHHHHhC
Q 013354          397 -----------------------NPLHRPTAAWLLEH  410 (444)
Q Consensus       397 -----------------------dP~~Rpt~~elL~h  410 (444)
                                             .+..|.++++||+.
T Consensus       159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~  195 (229)
T 2yle_A          159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKL  195 (229)
T ss_dssp             --------------------CCSCCCCCCSHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCcCCHHHHHHH
Confidence                                   24577888887763


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.77  E-value=8.6e-05  Score=74.62  Aligned_cols=78  Identities=9%  Similarity=-0.063  Sum_probs=48.0

Q ss_pred             HCCcccCCCCCCceEECCCCcEEEEeccccccccCCCCccccc--CCCcccCcccccCcC--CCChhhhHHHHHHHHHHH
Q 013354          275 AKNTVHRDIKGANILVDPSGRVKLADFGMAKHITGQSCPLSIK--GSPYWMAPEVIKNSN--GCNLAVDIWSLGCTVIEM  350 (444)
Q Consensus       275 ~~~ivH~Dlkp~NIll~~~~~vkL~DFGla~~~~~~~~~~~~~--gt~~y~APE~~~~~~--~~s~~sDvwSlGvil~el  350 (444)
                      ...++|||+++.|||++.++ ++|+||+.+..-..........  -...|++|+......  ......++..+...+|+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            45799999999999998776 9999999886532111000000  113466666543111  112345666788888887


Q ss_pred             HcC
Q 013354          351 ATT  353 (444)
Q Consensus       351 ltG  353 (444)
                      +.+
T Consensus       310 y~~  312 (420)
T 2pyw_A          310 FNK  312 (420)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764


No 270
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.62  E-value=8.1e-05  Score=71.15  Aligned_cols=71  Identities=6%  Similarity=-0.023  Sum_probs=42.1

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCe-eeEeeeEEcCCEEEEEEec
Q 013354          160 GRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNI-VRYYGSETLDDKLYIYLEY  238 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~  238 (444)
                      .+.|+.|....+|+.      +.+++|+.......      .....+|+.+++.+...++ .+++...  .+.-++++||
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~------~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~   88 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE------YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRY   88 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEEC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccc------eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEee
Confidence            678999999999998      45888876521111      1122346766666642222 4555433  3334689999


Q ss_pred             c-CCCCH
Q 013354          239 V-SGGSI  244 (444)
Q Consensus       239 ~-~ggsL  244 (444)
                      + .|.+|
T Consensus        89 i~~g~~l   95 (301)
T 3dxq_A           89 IAGAQTM   95 (301)
T ss_dssp             CTTCEEC
T ss_pred             cCCCccC
Confidence            9 66544


No 271
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.55  E-value=0.00078  Score=64.90  Aligned_cols=76  Identities=16%  Similarity=0.141  Sum_probs=58.3

Q ss_pred             eeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccC---CCCeeeEeeeEEcCCEEEEE
Q 013354          159 KGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLR---HPNIVRYYGSETLDDKLYIY  235 (444)
Q Consensus       159 ~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~---hpnIv~l~~~~~~~~~~~lv  235 (444)
                      ..+.|+.|.+..+|+...  ++..+++|+...     .   ....+.+|...|+.|.   ...+++++.+....+..++|
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~-----~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lv  109 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINER-----S---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLL  109 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEG-----G---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEE
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCc-----c---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEE
Confidence            356789999999999853  467888997642     1   1456778888888874   35678888888878889999


Q ss_pred             EeccCCCCH
Q 013354          236 LEYVSGGSI  244 (444)
Q Consensus       236 ~e~~~ggsL  244 (444)
                      |||++|..+
T Consensus       110 me~l~G~~~  118 (312)
T 3jr1_A          110 LEALNKSKN  118 (312)
T ss_dssp             EECCCCCCC
T ss_pred             EEeccCCCC
Confidence            999998754


No 272
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.47  E-value=0.00031  Score=66.61  Aligned_cols=80  Identities=16%  Similarity=0.065  Sum_probs=53.6

Q ss_pred             CCCeeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC---CCeeeEeeeEEcCC
Q 013354          154 GSRWKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH---PNIVRYYGSETLDD  230 (444)
Q Consensus       154 ~~~~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h---pnIv~l~~~~~~~~  230 (444)
                      +.+....+.+|.|..+.||+... .+|+.|++|+....  ...   ....+..|+..|+.|..   -.+++++.+.  + 
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~--~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~-   84 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDD--APA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D-   84 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTT--CCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T-
T ss_pred             CCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCC--Ccc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C-
Confidence            44567778899999999999975 46899999965321  111   12346779988888842   2344555432  2 


Q ss_pred             EEEEEEeccCCCC
Q 013354          231 KLYIYLEYVSGGS  243 (444)
Q Consensus       231 ~~~lv~e~~~ggs  243 (444)
                       -++||||+.++.
T Consensus        85 -~~lv~e~l~~~~   96 (288)
T 3f7w_A           85 -RTLAMEWVDERP   96 (288)
T ss_dssp             -TEEEEECCCCCC
T ss_pred             -ceEEEEeecccC
Confidence             368999987654


No 273
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.38  E-value=0.00045  Score=66.52  Aligned_cols=75  Identities=15%  Similarity=0.024  Sum_probs=45.0

Q ss_pred             eeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCC--CeeeEeee-----EEcCCEEE
Q 013354          161 RLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHP--NIVRYYGS-----ETLDDKLY  233 (444)
Q Consensus       161 ~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hp--nIv~l~~~-----~~~~~~~~  233 (444)
                      ..|+ |....||+... .+|+.+++|......   ..   ...+..|..+++.+...  .+++++..     ...++..+
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~---~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~  103 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPER---WT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYF  103 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTT---SC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCC---CC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEE
Confidence            4566 77889998743 346679999875211   11   23455677777766321  23334332     23356778


Q ss_pred             EEEeccCCCC
Q 013354          234 IYLEYVSGGS  243 (444)
Q Consensus       234 lv~e~~~ggs  243 (444)
                      ++|++++|..
T Consensus       104 ~l~~~i~G~~  113 (328)
T 1zyl_A          104 AVFPSVGGRQ  113 (328)
T ss_dssp             EEEECCCCEE
T ss_pred             EEEEecCCCC
Confidence            9999998743


No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.38  E-value=0.00045  Score=66.86  Aligned_cols=31  Identities=42%  Similarity=0.502  Sum_probs=26.8

Q ss_pred             CCcccCCCCCCceEECCC----CcEEEEecccccc
Q 013354          276 KNTVHRDIKGANILVDPS----GRVKLADFGMAKH  306 (444)
Q Consensus       276 ~~ivH~Dlkp~NIll~~~----~~vkL~DFGla~~  306 (444)
                      ..++|||+.+.||+++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            369999999999999874    6799999998764


No 275
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.36  E-value=0.00091  Score=64.16  Aligned_cols=140  Identities=14%  Similarity=0.120  Sum_probs=77.2

Q ss_pred             eeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC--eeeEee------eEEc
Q 013354          157 WKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN--IVRYYG------SETL  228 (444)
Q Consensus       157 ~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn--Iv~l~~------~~~~  228 (444)
                      ....+.|+.|....+|+....  +..+++|+....       ...+.+..|+.++..|...+  +.+++.      +...
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~-------~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~   94 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHTT--KDPLILTLYEKR-------VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGEL   94 (322)
T ss_dssp             EEEEEEECC---EEEEEEEES--SCCEEEEEECC----------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEE
T ss_pred             ceEeeccCCCcccceEEEEeC--CccEEEEEeCCC-------CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEE
Confidence            344567888888999998653  336889977531       11224455777766663212  233332      1223


Q ss_pred             CCEEEEEEeccCCCCHH-----------HH---HHhc-CCC--------CHHHHHH---------------HHHHHHHHH
Q 013354          229 DDKLYIYLEYVSGGSIY-----------KI---LQDY-GQL--------GESAIRS---------------YTQQILSGL  270 (444)
Q Consensus       229 ~~~~~lv~e~~~ggsL~-----------~~---l~~~-~~l--------~~~~~~~---------------i~~qi~~aL  270 (444)
                      .+..+++|+|++|..+.           ..   ++.. ..+        .......               +...+...+
T Consensus        95 ~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~  174 (322)
T 2ppq_A           95 SGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEI  174 (322)
T ss_dssp             TTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHH
T ss_pred             CCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence            46789999999876431           11   1111 011        1111010               011234455


Q ss_pred             HHHHH-------CCcccCCCCCCceEECCCCcEEEEeccccc
Q 013354          271 EYLHA-------KNTVHRDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       271 ~~LH~-------~~ivH~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +.+.+       .+++|+|+.+.|||++.++.+.|+||+.+.
T Consensus       175 ~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          175 DYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            55553       368999999999999877656899998764


No 276
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.09  E-value=0.0004  Score=68.82  Aligned_cols=135  Identities=15%  Similarity=0.148  Sum_probs=77.6

Q ss_pred             eeecccCceEEEEEEEcC-------CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCC-CCeeeEeeeEEcCCEE
Q 013354          161 RLLGRGTFGHVYLGFNSE-------SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRH-PNIVRYYGSETLDDKL  232 (444)
Q Consensus       161 ~~LG~G~fg~Vy~a~~~~-------~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-pnIv~l~~~~~~~~~~  232 (444)
                      +.|..|-...+|++....       +++.+++|+...   ..   .....+.+|..+++.|.. .-..++++.+..    
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~---~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----  125 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA---IL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----  125 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC---cc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence            456667778899987642       357888886421   11   112345578888887742 223566665543    


Q ss_pred             EEEEeccCCCCHH--------------HHHHh---c----C-CCC--HHHHHHHHHHHHH-------------------H
Q 013354          233 YIYLEYVSGGSIY--------------KILQD---Y----G-QLG--ESAIRSYTQQILS-------------------G  269 (444)
Q Consensus       233 ~lv~e~~~ggsL~--------------~~l~~---~----~-~l~--~~~~~~i~~qi~~-------------------a  269 (444)
                      .+||||++|.+|.              +.|.+   .    + ...  ...+.++..++..                   .
T Consensus       126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~  205 (379)
T 3feg_A          126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE  205 (379)
T ss_dssp             EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred             ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence            2899999875542              11111   0    0 111  3445555544422                   2


Q ss_pred             HHHHH----HC----CcccCCCCCCceEECCC----CcEEEEeccccc
Q 013354          270 LEYLH----AK----NTVHRDIKGANILVDPS----GRVKLADFGMAK  305 (444)
Q Consensus       270 L~~LH----~~----~ivH~Dlkp~NIll~~~----~~vkL~DFGla~  305 (444)
                      +..|.    ..    .++|+|+.+.||+++.+    +.+.|+||..+.
T Consensus       206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            33332    22    48999999999999876    689999998875


No 277
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.04  E-value=0.0007  Score=68.25  Aligned_cols=73  Identities=15%  Similarity=0.137  Sum_probs=46.8

Q ss_pred             eeeecccCceEEEEEEEcC-------CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCe-eeEeeeEEcCCE
Q 013354          160 GRLLGRGTFGHVYLGFNSE-------SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNI-VRYYGSETLDDK  231 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~-------~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnI-v~l~~~~~~~~~  231 (444)
                      .+.|+.|....||++....       +++.+++|+....    ..   ...+.+|+.+++.|...++ +++++.+.  + 
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-  147 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET---ESHLVAESVIFTLLSERHLGPKLYGIFS--G-  147 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T-
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C-
Confidence            4568888889999997642       2578888876310    11   1234468888887753333 56666543  2 


Q ss_pred             EEEEEeccCCCC
Q 013354          232 LYIYLEYVSGGS  243 (444)
Q Consensus       232 ~~lv~e~~~ggs  243 (444)
                       .+|+||++|.+
T Consensus       148 -g~v~e~l~G~~  158 (429)
T 1nw1_A          148 -GRLEEYIPSRP  158 (429)
T ss_dssp             -EEEECCCCEEE
T ss_pred             -CEEEEEeCCcc
Confidence             38999997633


No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.92  E-value=0.00053  Score=67.44  Aligned_cols=74  Identities=8%  Similarity=-0.006  Sum_probs=41.1

Q ss_pred             eeeecccCceEEEEEEEcC--------CCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC-eeeEeeeEEcCC
Q 013354          160 GRLLGRGTFGHVYLGFNSE--------SGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN-IVRYYGSETLDD  230 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~--------~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn-Iv~l~~~~~~~~  230 (444)
                      .+.|+.|....+|+.....        .++.+++|+.......      ......|..+++.+...+ +.++++..  .+
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~------~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE------LYNTISEFEVYKTMSKYKIAPQLLNTF--NG  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG------TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc------eecHHHHHHHHHHHHhcCCCCceEEec--CC
Confidence            4567888888999987643        1267888865421111      112346777777774333 34566543  22


Q ss_pred             EEEEEEeccCCCC
Q 013354          231 KLYIYLEYVSGGS  243 (444)
Q Consensus       231 ~~~lv~e~~~ggs  243 (444)
                        ++||||++|..
T Consensus       110 --~~v~e~i~G~~  120 (369)
T 3c5i_A          110 --GRIEEWLYGDP  120 (369)
T ss_dssp             --EEEEECCCSEE
T ss_pred             --cEEEEEecCCc
Confidence              68999998754


No 279
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.59  E-value=0.012  Score=59.79  Aligned_cols=75  Identities=13%  Similarity=0.060  Sum_probs=46.5

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCe-eeEeeeEEcCCEEEEEEec
Q 013354          160 GRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNI-VRYYGSETLDDKLYIYLEY  238 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnI-v~l~~~~~~~~~~~lv~e~  238 (444)
                      .+.|+.|-...+|++.....+..+++|+.........+      ..+|..+++.|...++ .++++.+.  +  .+||||
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id------R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~  182 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN------REREKKISCILYNKNIAKKIYVFFT--N--GRIEEF  182 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC------HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEEC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC------HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEe
Confidence            45688888899999976544578889876421111111      1468888888865444 56776652  2  259999


Q ss_pred             cCCCCH
Q 013354          239 VSGGSI  244 (444)
Q Consensus       239 ~~ggsL  244 (444)
                      ++|.+|
T Consensus       183 I~G~~l  188 (458)
T 2qg7_A          183 MDGYAL  188 (458)
T ss_dssp             CCSEEC
T ss_pred             eCCccC
Confidence            987443


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.57  E-value=0.015  Score=56.35  Aligned_cols=30  Identities=23%  Similarity=0.354  Sum_probs=26.9

Q ss_pred             CcccCCCCCCceEECCCCcEEEEecccccc
Q 013354          277 NTVHRDIKGANILVDPSGRVKLADFGMAKH  306 (444)
Q Consensus       277 ~ivH~Dlkp~NIll~~~~~vkL~DFGla~~  306 (444)
                      .++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            589999999999998878899999987754


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.25  E-value=0.011  Score=58.83  Aligned_cols=29  Identities=28%  Similarity=0.385  Sum_probs=25.7

Q ss_pred             CcccCCCCCCceEECCC------CcEEEEeccccc
Q 013354          277 NTVHRDIKGANILVDPS------GRVKLADFGMAK  305 (444)
Q Consensus       277 ~ivH~Dlkp~NIll~~~------~~vkL~DFGla~  305 (444)
                      .++|+|+.+.||+++.+      +.+.|+||..+.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            48999999999999876      789999998765


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.24  E-value=0.25  Score=49.32  Aligned_cols=74  Identities=8%  Similarity=0.007  Sum_probs=44.0

Q ss_pred             eeeecccCceEEEEEEEcCC-------CcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCC-eeeEeeeEEcCCE
Q 013354          160 GRLLGRGTFGHVYLGFNSES-------GEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPN-IVRYYGSETLDDK  231 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~-------g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpn-Iv~l~~~~~~~~~  231 (444)
                      .+.|..|-...+|+......       ++.+++|+........      -...+|..+++.+...+ ..++++.+  .+ 
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~------idR~~E~~~l~~L~~~gi~P~l~~~~--~~-  145 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF------YDSKVELDVFRYLSNINIAPNIIADF--PE-  145 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC------CCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh------cCHHHHHHHHHHHHhcCCCCCEEEEc--CC-
Confidence            35567777888999876521       5778888753211111      12245777777764222 34555533  22 


Q ss_pred             EEEEEeccCCCC
Q 013354          232 LYIYLEYVSGGS  243 (444)
Q Consensus       232 ~~lv~e~~~ggs  243 (444)
                       ++||||++|..
T Consensus       146 -~~I~efI~G~~  156 (424)
T 3mes_A          146 -GRIEEFIDGEP  156 (424)
T ss_dssp             -EEEEECCCSEE
T ss_pred             -CEEEEEeCCcc
Confidence             68899998865


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.91  E-value=0.15  Score=50.47  Aligned_cols=28  Identities=29%  Similarity=0.475  Sum_probs=24.3

Q ss_pred             cccCCCCCCceEE------CCCCcEEEEeccccc
Q 013354          278 TVHRDIKGANILV------DPSGRVKLADFGMAK  305 (444)
Q Consensus       278 ivH~Dlkp~NIll------~~~~~vkL~DFGla~  305 (444)
                      ++|+|+.+.|||+      +.+..+.|+||.+|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            6799999999999      445679999999875


No 284
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.83  E-value=0.096  Score=53.04  Aligned_cols=62  Identities=10%  Similarity=0.024  Sum_probs=16.1

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEE------EEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeeeEE
Q 013354          160 GRLLGRGTFGHVYLGFNSESGEMCAM------KEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGSET  227 (444)
Q Consensus       160 ~~~LG~G~fg~Vy~a~~~~~g~~vai------K~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~  227 (444)
                      .+.||   ||.||++........||+      |..+   ......+....+.+|..+++.++|+|+++.+++..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~---~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTG---QDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccc---cccccccccccccccccccccccccccCCCcceEE
Confidence            34565   999999988765567888      5443   12233444567888999999999999999887643


No 285
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=82.93  E-value=20  Score=37.79  Aligned_cols=79  Identities=22%  Similarity=0.333  Sum_probs=46.5

Q ss_pred             EeeeEEcCCEEEEEEeccCCCCHHHHHHhcCC---------------C--CHHHHHHHHHHHH--HHHHHHHHCCcccCC
Q 013354          222 YYGSETLDDKLYIYLEYVSGGSIYKILQDYGQ---------------L--GESAIRSYTQQIL--SGLEYLHAKNTVHRD  282 (444)
Q Consensus       222 l~~~~~~~~~~~lv~e~~~ggsL~~~l~~~~~---------------l--~~~~~~~i~~qi~--~aL~~LH~~~ivH~D  282 (444)
                      .|.+........+ .|+++..+|.+++.+++.               +  .......+++.++  +.+.|+=  |  -+|
T Consensus       478 ~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL--G--lGD  552 (696)
T 2x6h_A          478 PYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL--G--VGD  552 (696)
T ss_dssp             CCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH--T--CCC
T ss_pred             ccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc--c--CCC
Confidence            3444444333333 455555566666554321               1  1233445555542  3344442  2  269


Q ss_pred             CCCCceEECCCCcEEEEeccccc
Q 013354          283 IKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       283 lkp~NIll~~~~~vkL~DFGla~  305 (444)
                      -.++||||+.+|.+.-+|||.+.
T Consensus       553 RH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          553 RHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCcceEEeCCCCEEEEeehhhh
Confidence            99999999999999999999874


No 286
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.65  E-value=2.6  Score=37.71  Aligned_cols=115  Identities=12%  Similarity=0.066  Sum_probs=78.4

Q ss_pred             CCCCeeeEeeeEEcCCEEEEEEeccC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEECCC
Q 013354          215 RHPNIVRYYGSETLDDKLYIYLEYVS-GGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILVDPS  293 (444)
Q Consensus       215 ~hpnIv~l~~~~~~~~~~~lv~e~~~-ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  293 (444)
                      .||+++.. .+...++.+.+.++.-. ..++.. +   ..++....++++.+|+....+++  .-+|--|.|+||+++.+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i---k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~  115 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I---KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRD  115 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G---GGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H---HhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCC
Confidence            58888876 46667777777777654 222222 2   35788889999999988775443  33677799999999999


Q ss_pred             CcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCC
Q 013354          294 GRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWS  358 (444)
Q Consensus       294 ~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~  358 (444)
                      +.+++.=.|+-..                ++|.-      .+...=+-.+=|++..+++++..|.
T Consensus       116 ~~p~i~~RGik~~----------------l~P~~------~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          116 GLPIAKTRGLQNV----------------VDPLP------VSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             SCEEESCCEETTT----------------BSCCC------CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             CCEEEEEccCccC----------------CCCCC------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999976664332                23321      2333334456688999999988874


No 287
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.48  E-value=5.1  Score=35.87  Aligned_cols=115  Identities=9%  Similarity=0.079  Sum_probs=76.2

Q ss_pred             CCCCeeeEeeeEEcCCEEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHHCCcccCCCCCCceEECCC
Q 013354          215 RHPNIVRYYGSETLDDKLYIYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLE-YLHAKNTVHRDIKGANILVDPS  293 (444)
Q Consensus       215 ~hpnIv~l~~~~~~~~~~~lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~-~LH~~~ivH~Dlkp~NIll~~~  293 (444)
                      .||++  -..+...++.+.+.++.-+++.=+..++   .++....++++.+|+.... ++  ..-+|--|.|+||+++.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC
Confidence            57887  3334467788888887664433333343   5788888988888877655 33  345677899999999999


Q ss_pred             CcEEEEeccccccccCCCCcccccCCCcccCcccccCcCCCChhhhHHHHHHHHHHHHcCCCCCC
Q 013354          294 GRVKLADFGMAKHITGQSCPLSIKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVIEMATTKPPWS  358 (444)
Q Consensus       294 ~~vkL~DFGla~~~~~~~~~~~~~gt~~y~APE~~~~~~~~s~~sDvwSlGvil~elltG~~Pf~  358 (444)
                      +.++|.=.|+-.                -++|.-+      +...=+-.+=|++..++.++..|.
T Consensus       121 ~~p~i~hRGi~~----------------~lpP~e~------~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          121 LEPFFLHVGVKE----------------SLPPDEW------DDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             CCEEESCCEETT----------------TBSSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             CcEEEEEcCCcc----------------cCCCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999997666432                2344322      222223455578888888887763


No 288
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=79.58  E-value=40  Score=34.91  Aligned_cols=81  Identities=16%  Similarity=0.338  Sum_probs=48.5

Q ss_pred             eeEeeeEEcCCEEEEEEeccCCCCHHHHHHh----------cCC-------CCHHHHHHHHHHHH--HHHHHHHHCCccc
Q 013354          220 VRYYGSETLDDKLYIYLEYVSGGSIYKILQD----------YGQ-------LGESAIRSYTQQIL--SGLEYLHAKNTVH  280 (444)
Q Consensus       220 v~l~~~~~~~~~~~lv~e~~~ggsL~~~l~~----------~~~-------l~~~~~~~i~~qi~--~aL~~LH~~~ivH  280 (444)
                      ++.|.+........+ .|++++.++.+++.+          ..+       +.......+++.++  +.+.|+=  ||  
T Consensus       402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL--Gi--  476 (614)
T 3ls8_A          402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL--GV--  476 (614)
T ss_dssp             CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred             eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee--ec--
Confidence            344555555444443 566666555555433          211       11334455555543  3444443  32  


Q ss_pred             CCCCCCceEECCCCcEEEEeccccc
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +|=.++||||+.+|++.=+|||.+-
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            6889999999999999999999874


No 289
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=69.65  E-value=67  Score=30.57  Aligned_cols=137  Identities=14%  Similarity=0.158  Sum_probs=74.3

Q ss_pred             eeeeeeecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEeee-----------
Q 013354          157 WKKGRLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYGS-----------  225 (444)
Q Consensus       157 ~~~~~~LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~-----------  225 (444)
                      ++..+..-.|.. .||.+.-  ++..|+||-.        ..-..+.+..++...-.+..|++.-+.-.           
T Consensus        71 v~~I~~s~~Gst-gvff~~t--d~~~~VVK~s--------~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L  139 (342)
T 1cja_A           71 FKGIERSEKGTE-GLFFVET--ESGVFIVKRS--------TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECL  139 (342)
T ss_dssp             EEEEEECCSTTS-CEEEEEE--SSCEEEEECC--------TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHH
T ss_pred             eeEEEeccCCCC-CeEEEEe--CCCEEEEeCc--------HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHH
Confidence            555555566654 4555544  4778889933        11233455556666666677764322211           


Q ss_pred             -----------EEcCCEEEEEEeccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC----ccc-CCCCCCc
Q 013354          226 -----------ETLDDKLYIYLEYVSGGSIYKILQD--YGQLGESAIRSYTQQILSGLEYLHAKN----TVH-RDIKGAN  287 (444)
Q Consensus       226 -----------~~~~~~~~lv~e~~~ggsL~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~----ivH-~Dlkp~N  287 (444)
                                 ...+...+++|+|+.|..|...-..  ...+.++....+.+  +-+++.+..+.    .+. .--.+.|
T Consensus       140 ~~~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~N  217 (342)
T 1cja_A          140 AAIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDN  217 (342)
T ss_dssp             HHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred             HHhhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhh
Confidence                       0012346799999987665532110  01134444333221  34566666552    222 1247889


Q ss_pred             eEECCCC-cEEEEecccccc
Q 013354          288 ILVDPSG-RVKLADFGMAKH  306 (444)
Q Consensus       288 Ill~~~~-~vkL~DFGla~~  306 (444)
                      ||++.++ .+.++|-+.+..
T Consensus       218 IL~~~~n~~~~~IDhn~af~  237 (342)
T 1cja_A          218 IMLSERGATVVPIDSKIIPL  237 (342)
T ss_dssp             EEEESBTTCEEECSCCCCCC
T ss_pred             eEEeCCCCeEEEEcCCcccc
Confidence            9997654 499999988854


No 290
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=52.07  E-value=1.5e+02  Score=32.84  Aligned_cols=25  Identities=32%  Similarity=0.473  Sum_probs=23.2

Q ss_pred             CCCCCCceEECCCCcEEEEeccccc
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +|=.++||||+.+|.+.-+|||.+-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            7999999999999999999999864


No 291
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=40.56  E-value=2.3e+02  Score=28.69  Aligned_cols=139  Identities=20%  Similarity=0.187  Sum_probs=91.1

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEeecccccccHHHHHHHHHHHHHHHccCCCCeeeEee------------------
Q 013354          163 LGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSKESAQQLGQEIALLSRLRHPNIVRYYG------------------  224 (444)
Q Consensus       163 LG~G~fg~Vy~a~~~~~g~~vaiK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~------------------  224 (444)
                      |.-|--|.|-.+... -+-.++.|+|+-. .....+-..+.+.+...+.++  |..+=++.+                  
T Consensus       314 ~APGikGmVM~VFTL-PSf~~VFKvIKD~-F~p~K~~tr~~Vk~KY~LVK~--hDRVGRMADT~Efsn~~fp~~Rfs~eL  389 (578)
T 3eps_A          314 EAPGIRGMVMLVFTL-PGFDRVFKVIKDK-FAPQKEMSAAHVRACYQLVKE--HDRVGRMADTQEFENFVLEKRHISPAL  389 (578)
T ss_dssp             ECSSCCCSSEEEEEC-TTCSEEEEEECSS-CCTTCCCCHHHHHHHHHHHHT--SCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred             ECCCCCceEEEEEcC-CCCceEEEEEccC-CCCccccCHHHHHHHHHHHHh--hhhhhhhhhhhhhhcccCchhhCCHHH
Confidence            677888988888654 4788999998632 111111222334444444443  322222211                  


Q ss_pred             -----------eEEcCCEEE---EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCCCceEE
Q 013354          225 -----------SETLDDKLY---IYLEYVSGGSIYKILQDYGQLGESAIRSYTQQILSGLEYLHAKNTVHRDIKGANILV  290 (444)
Q Consensus       225 -----------~~~~~~~~~---lv~e~~~ggsL~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  290 (444)
                                 +..+++.+.   +.+|.- -..|.-+|++   -+..++...+.+--.||+.|-..+|.-||.-.+|+=|
T Consensus       390 L~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~---a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNFGV  465 (578)
T 3eps_A          390 MELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQ---VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGV  465 (578)
T ss_dssp             HHHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHH---CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             HHHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhh---CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCc
Confidence                       112233332   233332 3578888876   3566788888899999999999999999999999999


Q ss_pred             CCCCcEEEEeccccccccC
Q 013354          291 DPSGRVKLADFGMAKHITG  309 (444)
Q Consensus       291 ~~~~~vkL~DFGla~~~~~  309 (444)
                      +..|+|..-|+.-.+.+.+
T Consensus       466 TRhgRVVFYDYDEI~ylTd  484 (578)
T 3eps_A          466 TRHGRVVFYDYDEICYMTE  484 (578)
T ss_dssp             CTTCCEEECCGGGCEESTT
T ss_pred             cccceEEEecccceeeecc
Confidence            9999999999987766544


No 292
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=37.18  E-value=1.8e+02  Score=31.82  Aligned_cols=25  Identities=28%  Similarity=0.454  Sum_probs=22.7

Q ss_pred             CCCCCCceEECCCCcEEEEeccccc
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +|=.++||||+.+|++.-+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            7999999999999999999999875


No 293
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=32.01  E-value=1.6e+02  Score=32.23  Aligned_cols=25  Identities=32%  Similarity=0.449  Sum_probs=23.1

Q ss_pred             CCCCCCceEECCCCcEEEEeccccc
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +|=.++||||+.+|++.-+|||.+-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            7999999999999999999999764


No 294
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=31.95  E-value=2.3e+02  Score=31.46  Aligned_cols=25  Identities=32%  Similarity=0.457  Sum_probs=23.0

Q ss_pred             CCCCCCceEECCCCcEEEEeccccc
Q 013354          281 RDIKGANILVDPSGRVKLADFGMAK  305 (444)
Q Consensus       281 ~Dlkp~NIll~~~~~vkL~DFGla~  305 (444)
                      +|=.++||||+.+|++.=+|||.+-
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhh
Confidence            6889999999999999999999874


Done!