Your job contains 1 sequence.
>013364
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK
WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA
EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN
GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP
KKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEED
EEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLC
ESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVF
VGVNGVGKSTNLAKVKLIILIDFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013364
(444 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118701 - symbol:AT4G30600 species:3702 "Arabi... 1302 7.9e-133 1
DICTYBASE|DDB_G0277377 - symbol:srpR "signal recognition ... 295 4.5e-49 2
FB|FBgn0010391 - symbol:Gtp-bp "GTP-binding protein" spec... 326 1.2e-46 2
UNIPROTKB|F1NXV4 - symbol:SRPR "Uncharacterized protein" ... 337 1.6e-45 2
MGI|MGI:1914648 - symbol:Srpr "signal recognition particl... 310 2.7e-43 2
RGD|1311504 - symbol:Srpr "signal recognition particle re... 302 2.1e-42 2
UNIPROTKB|F1MNJ2 - symbol:SRPR "Signal recognition partic... 290 3.1e-41 2
UNIPROTKB|Q3MHE8 - symbol:SRPR "Signal recognition partic... 290 4.4e-41 2
UNIPROTKB|F1S754 - symbol:SRPR "Uncharacterized protein" ... 284 2.0e-40 2
UNIPROTKB|P08240 - symbol:SRPR "Signal recognition partic... 281 4.3e-40 2
UNIPROTKB|P06625 - symbol:SRPR "Signal recognition partic... 280 5.5e-40 2
ZFIN|ZDB-GENE-030219-11 - symbol:srpr "signal recognition... 307 1.9e-39 2
WB|WBGene00009521 - symbol:F38A1.8 species:6239 "Caenorha... 299 6.4e-38 2
UNIPROTKB|F1PLH3 - symbol:SRPR "Signal recognition partic... 280 3.3e-36 2
UNIPROTKB|J9NTJ9 - symbol:SRPR "Signal recognition partic... 280 3.7e-35 2
UNIPROTKB|J9P788 - symbol:SRPR "Signal recognition partic... 280 1.9e-31 2
ASPGD|ASPL0000006202 - symbol:AN6627 species:162425 "Emer... 214 3.0e-25 3
POMBASE|SPBC3B9.03 - symbol:SPBC3B9.03 "signal recognitio... 232 5.7e-22 2
SGD|S000002700 - symbol:SRP101 "Signal recognition partic... 215 1.5e-15 2
CGD|CAL0003010 - symbol:orf19.3952 species:5476 "Candida ... 138 3.3e-06 1
>TAIR|locus:2118701 [details] [associations]
symbol:AT4G30600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006605 "protein targeting" evidence=ISS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003924
EMBL:AL161577 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
HOGENOM:HOG000201671 OMA:LILWSSC EMBL:AY065066 EMBL:AY133612
IPI:IPI00534083 PIR:A85358 RefSeq:NP_194789.1 UniGene:At.4581
HSSP:P83749 ProteinModelPortal:Q9M0A0 SMR:Q9M0A0 STRING:Q9M0A0
PaxDb:Q9M0A0 PRIDE:Q9M0A0 EnsemblPlants:AT4G30600.1 GeneID:829183
KEGG:ath:AT4G30600 TAIR:At4g30600 InParanoid:Q9M0A0
PhylomeDB:Q9M0A0 ProtClustDB:CLSN2685629 ArrayExpress:Q9M0A0
Genevestigator:Q9M0A0 Uniprot:Q9M0A0
Length = 634
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 283/450 (62%), Positives = 319/450 (70%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKE+GNALKGSPIDTLIRSCLLEERSG SFNYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQXXXXX 120
WTFHN+LGLVFVAVYQRILHLLYVDDLL+M+KQSFSE+YDPKR Y DFDE FRQ
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120
Query: 121 XXXXXXXXXSKQVTKPMNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRGR--KL 178
+KQV KP+ + + + L
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVSTL 180
Query: 179 ENGHSNVGNVEIEE-SRVTG-VANGKENTSSNIGAFDVSKLQKLRNKG--GK----KTDT 230
NGHSN GN ++E+ S+ T +ANGKENTSSN+ A D+SKLQKLR+KG G+ KTD+
Sbjct: 181 TNGHSN-GNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDS 238
Query: 231 VVSKGSN-PDPKKKITKKNRVWDDSPP-ESKLDFTDPAGGNGSN--IEVEAADHGESMMD 286
+ +K S +P KK TKKNRVWDD+ P +SKLDFTD NG+N +++ AAD GESMMD
Sbjct: 239 IGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMD 298
Query: 287 KXXXXXXXXXXXXXXXXGKHNKP-DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
K G KP AKK GWFSS+FQSI GKANL++ DL PALKALK+R
Sbjct: 299 KEEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKER 358
Query: 346 LMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRD 405
LMTKNVAEEIAEKLCESV ASLEGKKL+SFTRISS VQAAME+ALVRILTPRRSIDILRD
Sbjct: 359 LMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRD 418
Query: 406 VHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 435
VHAAKEQRKPY KSTNLAKV
Sbjct: 419 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKV 448
>DICTYBASE|DDB_G0277377 [details] [associations]
symbol:srpR "signal recognition particle receptor
alpha subunit" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 dictyBase:DDB_G0277377 GO:GO:0005525
GO:GO:0005789 GO:GO:0003924 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005785 GO:GO:0005047
HSSP:P08240 RefSeq:XP_642799.1 ProteinModelPortal:Q54ZR7
STRING:Q54ZR7 EnsemblProtists:DDB0252680 GeneID:8620992
KEGG:ddi:DDB_G0277377 OMA:LILWSSC ProtClustDB:CLSZ2846855
Uniprot:Q54ZR7
Length = 615
Score = 295 (108.9 bits), Expect = 4.5e-49, Sum P(2) = 4.5e-49
Identities = 83/265 (31%), Positives = 130/265 (49%)
Query: 176 RKLENGHSNVGNVEIEE-SRVTGVANGKENTSSNIGAF--DVSKLQKLRNKGGKKTDTVV 232
R+ +N +N+ ++ ++ S + ++G ++ ++ GA + + ++ N G KK V
Sbjct: 180 RRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKK---V 236
Query: 233 SKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXXX 290
+ KK R W+D K L+ + + NG+ I E MD
Sbjct: 237 KDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSDNSNGTEIVREKIQKFNIDMD---- 292
Query: 291 XXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKN 350
++ +AK F F + G +DK DLEP L K L KN
Sbjct: 293 ---------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKN 343
Query: 351 VAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAK 410
VA ++A+K+ +S+ LEGKKLA+F ++S+V+ ME+ + RILTP+R+IDILR+V A K
Sbjct: 344 VAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVK 403
Query: 411 EQRKPYXXXXXXXXXXXKSTNLAKV 435
+R PY KSTNLAKV
Sbjct: 404 GKR-PYSIVFSGVNGVGKSTNLAKV 427
Score = 249 (92.7 bits), Expect = 4.5e-49, Sum P(2) = 4.5e-49
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ I T+GG++LW+ KE +KGSPI++LI+ LLEERS SF DS Y+LK
Sbjct: 1 MLDSFTILTKGGIVLWS-KEFAK-IKGSPINSLIKKVLLEERSAETSFQIDS----YSLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---KRTDYSDF 109
WTF NE L+FV VYQ+I LLY+++LL +K+ F ++Y K + SDF
Sbjct: 55 WTFSNEFDLIFVVVYQKIFTLLYIEELLTTVKKRFIKMYKDLLLKLKESSDF 106
Score = 37 (18.1 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 14/71 (19%), Positives = 27/71 (38%)
Query: 208 NIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAG 267
N A +++K++ K +K + + N + DDS S D + +
Sbjct: 155 NERAIKEGRVEKVKRKEQEKKEKAERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSN 214
Query: 268 GNGSNIEVEAA 278
G N + + A
Sbjct: 215 GATKNQQTDVA 225
>FB|FBgn0010391 [details] [associations]
symbol:Gtp-bp "GTP-binding protein" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007409
"axonogenesis" evidence=IEP] [GO:0050708 "regulation of protein
secretion" evidence=IEP] [GO:0005785 "signal recognition particle
receptor complex" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005789 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0003723 GO:GO:0007409 GO:GO:0050708
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 OMA:LILWSSC EMBL:AY061329
EMBL:S65640 RefSeq:NP_524887.2 UniGene:Dm.129
ProteinModelPortal:Q9U5L1 SMR:Q9U5L1 IntAct:Q9U5L1 MINT:MINT-765133
STRING:Q9U5L1 PaxDb:Q9U5L1 EnsemblMetazoa:FBtr0073480 GeneID:47251
KEGG:dme:Dmel_CG2522 CTD:47251 FlyBase:FBgn0010391
GeneTree:ENSGT00550000074936 InParanoid:Q9U5L1 OrthoDB:EOG4W0VV7
PhylomeDB:Q9U5L1 GenomeRNAi:47251 NextBio:838983 Bgee:Q9U5L1
GermOnline:CG2522 Uniprot:Q9U5L1
Length = 614
Score = 326 (119.8 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 91/242 (37%), Positives = 127/242 (52%)
Query: 205 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESK 259
T S + + K +KLR K KKT SK S P+ K KK RVWD +S +
Sbjct: 177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAAL 233
Query: 260 LDFT--DPAGGNGSNIEVEAADHGESMM-DKXXXXXXXXXXXXXXXXGK-HNKPDAKK-- 313
LD + P NI E + ++ D G+ + +KK
Sbjct: 234 LDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGK 293
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
G S F+ I G + ADL+PAL+ ++D L++KNVA EIA KLC+SVAASL+GK++
Sbjct: 294 RGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMG 353
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLA 433
+F I+S V+ A+ E+LVRIL+P+R IDI+RD +K +PY KSTNLA
Sbjct: 354 TFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLA 413
Query: 434 KV 435
K+
Sbjct: 414 KI 415
Score = 193 (73.0 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 46/116 (39%), Positives = 71/116 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW GN+ S I++LIR +LEER+ A + Y+ A K
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK 58
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQ 115
NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD +R+
Sbjct: 59 --LDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRR 112
Score = 52 (23.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGN 269
K + N+ K TV S D KK + K+ + ++PP SK + P G+
Sbjct: 129 KTMRSYNESQKSKKTVASMIQ--DDKKPVEKRVNI-QEAPPPSKSQPSSPPTGS 179
>UNIPROTKB|F1NXV4 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
OMA:LILWSSC GeneTree:ENSGT00550000074936 EMBL:AADN02042027
IPI:IPI00593518 Ensembl:ENSGALT00000001579 Uniprot:F1NXV4
Length = 644
Score = 337 (123.7 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 92/281 (32%), Positives = 137/281 (48%)
Query: 174 RGRKLENGHS-NVGNVEIEESRVTGVANGKEN-TSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+G K E + N + + A KE T I + + K K G+K+
Sbjct: 173 KGSKKEGNEAVTASNKTAPGEKQSSAAGDKEELTKDEILQKNREEFFKRHMKAGEKS--- 229
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXX 289
SK PD +K+ KK RVWD +K LD+++ GN +E D ++ D+
Sbjct: 230 -SKSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPMEDFDPDMALRDRNR 288
Query: 290 X--------XXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPAL 339
+KP KK G M + + G +L + D++P L
Sbjct: 289 EPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTRQDMDPVL 348
Query: 340 KALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRS 399
+ +KD L+ KNVA EIA +LCESVA LEGK + +FT ++S V+ A++EALV+IL P+R
Sbjct: 349 EKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRR 408
Query: 400 IDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
+D+LRDV A+ R+PY KSTNLAK+ ++
Sbjct: 409 VDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLI 449
Score = 172 (65.6 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKEL-GNALKGS-PIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GGL+LW + + G A + P++ LIRS LL+ER G SF ++ A T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVRGPASAATAPVNALIRSVLLQERGGNNSFTHE----ALT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 57 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY 97
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSN 237
K++ +NKG KK SN
Sbjct: 166 KVKNKKNKGSKKEGNEAVTASN 187
>MGI|MGI:1914648 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005785 "signal recognition particle
receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 MGI:MGI:1914648 GO:GO:0005525 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:AK004967 EMBL:AK038017 EMBL:BC012512 EMBL:BC021839
IPI:IPI00119695 RefSeq:NP_080406.1 UniGene:Mm.284688
ProteinModelPortal:Q9DBG7 SMR:Q9DBG7 STRING:Q9DBG7
PhosphoSite:Q9DBG7 PaxDb:Q9DBG7 PRIDE:Q9DBG7
Ensembl:ENSMUST00000034541 GeneID:67398 KEGG:mmu:67398
UCSC:uc009osy.1 InParanoid:Q9DBG7 NextBio:324466 Bgee:Q9DBG7
Genevestigator:Q9DBG7 GermOnline:ENSMUSG00000032042 Uniprot:Q9DBG7
Length = 636
Score = 310 (114.2 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 86/274 (31%), Positives = 135/274 (49%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
RG K E + + + +G++ G EN + K ++ K GK D S
Sbjct: 170 RGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDV 406
+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+
Sbjct: 348 IAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDI 407
Query: 407 HAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
A+ +++PY KSTNLAK+ +L
Sbjct: 408 MDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 441
Score = 179 (68.1 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>RGD|1311504 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:1311504 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:BC105782 IPI:IPI00362579 RefSeq:NP_001029322.1
UniGene:Rn.18349 SMR:Q3KRC3 STRING:Q3KRC3
Ensembl:ENSRNOT00000015177 GeneID:315548 KEGG:rno:315548
UCSC:RGD:1311504 InParanoid:Q3KRC3 NextBio:669402
Genevestigator:Q3KRC3 Uniprot:Q3KRC3
Length = 636
Score = 302 (111.4 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 85/274 (31%), Positives = 134/274 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
+G K E + + + +G+ G EN + K ++ K GK D S
Sbjct: 170 KGSKKEGSDGPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDV 406
+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+
Sbjct: 348 IAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDI 407
Query: 407 HAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
A+ +++PY KSTNLAK+ +L
Sbjct: 408 MDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 441
Score = 179 (68.1 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|F1MNJ2 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 IPI:IPI00695733
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:DAAA02063109
Ensembl:ENSBTAT00000018762 Uniprot:F1MNJ2
Length = 598
Score = 290 (107.1 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 84/277 (30%), Positives = 130/277 (46%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 348 DHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 407
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
RD+ A+ ++PY KSTNLAK+ +L
Sbjct: 408 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 444
Score = 179 (68.1 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 52 (23.4 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>UNIPROTKB|Q3MHE8 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
EMBL:BC105264 IPI:IPI00695733 RefSeq:NP_001068590.1 UniGene:Bt.5518
HSSP:P08240 ProteinModelPortal:Q3MHE8 SMR:Q3MHE8 STRING:Q3MHE8
PRIDE:Q3MHE8 GeneID:281504 KEGG:bta:281504 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 InParanoid:Q3MHE8
OrthoDB:EOG4W0XCP NextBio:20805473 Uniprot:Q3MHE8
Length = 639
Score = 290 (107.1 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 84/277 (30%), Positives = 130/277 (46%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 348 DHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 407
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
RD+ A+ ++PY KSTNLAK+ +L
Sbjct: 408 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 444
Score = 179 (68.1 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 52 (23.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>UNIPROTKB|F1S754 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:CU466237 EMBL:FP102836 EMBL:GACC01000039
Ensembl:ENSSSCT00000016593 Uniprot:F1S754
Length = 638
Score = 284 (105.0 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 80/277 (28%), Positives = 130/277 (46%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +GV G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKAVPTEKSGVPVGPEN-GVELSKEELIRRKREEFIQKHGRGVEKS 228
Query: 232 VSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
+ PK+K K RVW S + LD++ P NG+ D G
Sbjct: 229 GKSTKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGPG 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP + K G M + + G +L + D+E L ++
Sbjct: 288 GQLQDLDCSSSDDEGATQNS-TKPSSTKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMR 346
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA+ LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 347 DHLIAKNVAADIAVQLCESVASKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 406
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
RD+ A+ ++PY KSTNLAK+ +L
Sbjct: 407 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Score = 179 (68.1 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|P08240 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006613
"cotranslational protein targeting to membrane" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987 EMBL:CH471065
GO:GO:0006412 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
PDB:2GO5 PDBsum:2GO5 PDB:2FH5 PDBsum:2FH5 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X06272 EMBL:AK312377 EMBL:AP001318 EMBL:BC001162 EMBL:BC009110
EMBL:BC013583 IPI:IPI00385267 PIR:A29440 RefSeq:NP_001171313.1
RefSeq:NP_003130.2 UniGene:Hs.368376 ProteinModelPortal:P08240
SMR:P08240 IntAct:P08240 MINT:MINT-1404634 STRING:P08240
PhosphoSite:P08240 DMDM:20455516 PaxDb:P08240 PRIDE:P08240
DNASU:6734 Ensembl:ENST00000332118 GeneID:6734 KEGG:hsa:6734
UCSC:uc001qdh.3 GeneCards:GC11M126132 HGNC:HGNC:11307 MIM:182180
neXtProt:NX_P08240 PharmGKB:PA36131 InParanoid:P08240 OMA:KEGSDGP
ChiTaRS:SRPR EvolutionaryTrace:P08240 GenomeRNAi:6734 NextBio:26272
ArrayExpress:P08240 Bgee:P08240 CleanEx:HS_SRPR
Genevestigator:P08240 GermOnline:ENSG00000182934 Uniprot:P08240
Length = 638
Score = 281 (104.0 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 82/278 (29%), Positives = 135/278 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKPVPAEKSGLPVGPEN-GVELSKEELIRRKREEFIQKHGRGMEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
+K + D PK+K K RVW+ +K LD++ P NG+ + D G
Sbjct: 229 -NKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGS 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEGAAQNS-TKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
LRD+ A+ +++PY KSTNLAK+ +L
Sbjct: 406 LRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Score = 179 (68.1 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|P06625 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005789 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 Reactome:REACT_146484 GO:GO:0005047
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X03184 PIR:A24570 ProteinModelPortal:P06625 SMR:P06625
STRING:P06625 PRIDE:P06625 InParanoid:P06625 Uniprot:P06625
Length = 638
Score = 280 (103.6 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 83/278 (29%), Positives = 134/278 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
LRD+ A+ ++PY KSTNLAK+ +L
Sbjct: 406 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Score = 179 (68.1 bits), Expect = 5.5e-40, Sum P(2) = 5.5e-40
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>ZFIN|ZDB-GENE-030219-11 [details] [associations]
symbol:srpr "signal recognition particle receptor
(docking protein)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
ZFIN:ZDB-GENE-030219-11 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
CTD:6734 GeneTree:ENSGT00550000074936 EMBL:CU469519 IPI:IPI00799782
RefSeq:XP_697518.3 UniGene:Dr.79180 Ensembl:ENSDART00000086823
GeneID:569063 KEGG:dre:569063 NextBio:20889487 Uniprot:E7EZW6
Length = 650
Score = 307 (113.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 83/270 (30%), Positives = 139/270 (51%)
Query: 176 RKLENGHSNVGNVEIEESRVTGVAN---G----KENTSSNIGAFDVSKLQKLRNKGGKKT 228
+ +ENG ++ EIE +R ++ G K + S K+ ++ + GGK +
Sbjct: 195 KAVENGSESLTQDEIERNRAKFISKQLGGGKPEKPSKSPKPQGKPKGKVNRVWDMGGKSS 254
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKX 288
+ G+N + ++ +D+ E + + G+ ++ E++D + +++
Sbjct: 255 GELDYSGTNGNNSNDAKSED---NDATAEPAIQ-VESMKGDLRGVDYESSDDEDEEVEEE 310
Query: 289 XXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMF---QSIAGKANLDKADLEPALKALKDR 345
K AK++G F MF + + G NL + D+EP L +KD
Sbjct: 311 EKKVVVTNT---------KKTGAKRSG-FGGMFGMLKGLVGSKNLTQEDMEPVLDKMKDH 360
Query: 346 LMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRD 405
L+ KNVA EIA +LC+SVA LEGK + +FT ++S V+ A++++LV+IL P+R +DILRD
Sbjct: 361 LIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRD 420
Query: 406 VHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 435
V A+ QRKP+ KSTNLAK+
Sbjct: 421 VLEARSQRKPFVITFCGVNGVGKSTNLAKI 450
Score = 146 (56.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG F +++ +
Sbjct: 1 MLDFFAIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQERSGNNFFTHNTL----S 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ NE LVFV +Q L L YVD + ++ F + Y
Sbjct: 56 LKYKLDNEFELVFVVGFQANLMLKYVDKFIDDVQLHFRDRY 96
>WB|WBGene00009521 [details] [associations]
symbol:F38A1.8 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0048477
SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:FO080472 EMBL:FO081324 EMBL:FO081776
RefSeq:NP_741303.2 ProteinModelPortal:G4RYA5 SMR:G4RYA5
EnsemblMetazoa:F38A1.8 GeneID:185438 KEGG:cel:CELE_F38A1.8
CTD:185438 WormBase:F38A1.8 NextBio:928280 Uniprot:G4RYA5
Length = 625
Score = 299 (110.3 bits), Expect = 6.4e-38, Sum P(2) = 6.4e-38
Identities = 79/240 (32%), Positives = 122/240 (50%)
Query: 204 NTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG-SNPDPKKKITKKNRVW--DDSPPESK- 259
N++S G+ D L++ K + KG P K K+ RVW P + K
Sbjct: 194 NSASPPGSPDEEVLRRRDQMFKKMSGNTKKKGPEEPTSPKPKGKQARVWALSGKPADVKN 253
Query: 260 LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPD---AKKTG- 315
LD +DP + + + E ESM ++ + D K++G
Sbjct: 254 LDRSDPKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQESDDEDEDDNDQQVVKQSGG 313
Query: 316 WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASF 375
WFS M + + G+ L DL P ++ +++ L+ KNVA E AEK+C+SV + LEGK + +F
Sbjct: 314 WFS-MIKGLVGEKKLSAEDLNPLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNF 372
Query: 376 TRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 435
+R++ V+ A+ E+LV++LTP+ +DILRDV AK +PY KSTNLAK+
Sbjct: 373 SRVAQEVKTAVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKI 432
Score = 139 (54.0 bits), Expect = 6.4e-38, Sum P(2) = 6.4e-38
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT+GG+ LW +E + + LI+ L+EER + YT+K
Sbjct: 1 MIELFSIFTKGGVCLWNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGN----YTMK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF----SE-------IYDPKRTDYSDF 109
+ NE ++F+ +YQ I++L Y + LL ++ SF SE + P Y +F
Sbjct: 57 FQLDNEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNF 116
Query: 110 DEMFRQ 115
DE F +
Sbjct: 117 DETFHE 122
>UNIPROTKB|F1PLH3 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 RefSeq:XP_546411.3
Ensembl:ENSCAFT00000016629 GeneID:489293 KEGG:cfa:489293
Uniprot:F1PLH3
Length = 638
Score = 280 (103.6 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 83/278 (29%), Positives = 134/278 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
LRD+ A+ ++PY KSTNLAK+ +L
Sbjct: 406 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Score = 143 (55.4 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWASRGASLGFLGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|J9NTJ9 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 Ensembl:ENSCAFT00000045313
Uniprot:J9NTJ9
Length = 637
Score = 280 (103.6 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 83/278 (29%), Positives = 134/278 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 169 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 227
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 228 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 285
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 286 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 344
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 345 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 404
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
LRD+ A+ ++PY KSTNLAK+ +L
Sbjct: 405 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 442
Score = 133 (51.9 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWF-QGVSACCFGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 55 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 93
>UNIPROTKB|J9P788 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:AAEX03003376
EMBL:AAEX03003378 EMBL:AAEX03003377 EMBL:AAEX03003379
Ensembl:ENSCAFT00000047935 Uniprot:J9P788
Length = 773
Score = 280 (103.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 83/278 (29%), Positives = 134/278 (48%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 305 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 363
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 364 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 421
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 422 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 480
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 481 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 540
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVKLIIL 440
LRD+ A+ ++PY KSTNLAK+ +L
Sbjct: 541 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 578
Score = 101 (40.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 17 TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQ 76
TC+ + T R+ EER G SF ++ A TLK+ N+ LVFV +Q
Sbjct: 151 TCRRRSGHTEVGARRTGPRARAAEERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQ 206
Query: 77 RILHLLYVDDLLAMMKQSFSEIY 99
+IL L YVD L+ + + F + Y
Sbjct: 207 KILTLTYVDKLIDDVHRLFRDKY 229
>ASPGD|ASPL0000006202 [details] [associations]
symbol:AN6627 species:162425 "Emericella nidulans"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 EMBL:BN001301 SUPFAM:SSF64356
EMBL:AACD01000110 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 HOGENOM:HOG000201671
OrthoDB:EOG42Z7ZQ RefSeq:XP_664231.1 ProteinModelPortal:Q5AYK3
STRING:Q5AYK3 EnsemblFungi:CADANIAT00007408 GeneID:2870372
KEGG:ani:AN6627.2 OMA:THETGRR Uniprot:Q5AYK3
Length = 636
Score = 214 (80.4 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 48/126 (38%), Positives = 71/126 (56%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRIS 379
+ ++I G L +ADLE LKA++D L+ KNVA E A +LCE V L GKK +F +
Sbjct: 326 LLRNIVGGKILTEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVKQELVGKKTGNFQSVD 385
Query: 380 SIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRK-----PYXXXXXXXXXXXKSTNLAK 434
+ +++AME +L +ILTP S+D+L ++ + K PY KSTNL K
Sbjct: 386 AALKSAMESSLRKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISIVGVNGVGKSTNLGK 445
Query: 435 VKLIIL 440
+ +L
Sbjct: 446 ICYFLL 451
Score = 131 (51.2 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
MLE I + G++LW+ K + +++L+ +EE++ L + +
Sbjct: 1 MLEAFEILSTSGVVLWS-KSYA-PVGAHVVNSLVNDVFIEEKAQLQNATNSVSPIFKKEK 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y
Sbjct: 59 YTLKWRKSKDFNLIFVAVYQSLLHLGWIDKLLDNISTIFVDLY 101
Score = 48 (22.0 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 229 DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPA 266
D V KG P KK+ RVWD D LD++ PA
Sbjct: 221 DEQVRKGKTPKSGKKL----RVWDADGLADEDDGRVLDYSAPA 259
>POMBASE|SPBC3B9.03 [details] [associations]
symbol:SPBC3B9.03 "signal recognition particle receptor
alpha subunit Srp101 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISM] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPBC3B9.03
GO:GO:0005525 GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
GO:GO:0003924 GenomeReviews:CU329671_GR SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 HSSP:Q6MTB9 HOGENOM:HOG000201671
PIR:T40342 RefSeq:NP_596660.1 ProteinModelPortal:O43032
STRING:O43032 EnsemblFungi:SPBC3B9.03.1 GeneID:2540909
KEGG:spo:SPBC3B9.03 OMA:PVEANND OrthoDB:EOG42Z7ZQ NextBio:20802024
Uniprot:O43032
Length = 547
Score = 232 (86.7 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 70/245 (28%), Positives = 108/245 (44%)
Query: 200 NGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK 259
N + S + A + + +K +N+ K SK +N PKK K+ R WDD E +
Sbjct: 126 NETDTKSLPVEANNDNSARK-KNEYEMKKKGAQSKQTNA-PKKG-KKQLRKWDDQITEEE 182
Query: 260 ---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGW 316
L+++ A ++ +K + K
Sbjct: 183 QAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASS 242
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFT 376
S+F ++ G L + DL P LK +++ L KNVA IA +LCESV ASL KK+ SF
Sbjct: 243 AFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFD 302
Query: 377 RISSIVQAAMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKV 435
+ + V A + L +ILTP S+D+L + + K + +PY KST LAK+
Sbjct: 303 TVKNTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKI 362
Query: 436 KLIIL 440
+L
Sbjct: 363 AYWLL 367
Score = 87 (35.7 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLL-EERSGLASFNYDSAGAAYTL 59
M++ I +GG++LW K+ + + + L L E+R+ + +D YT+
Sbjct: 1 MIDLFAIVNKGGIVLW--KKTNSLVNLKCLQVLFHEAFLSEQRTVNNTVTFDR----YTM 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD 105
++ + +VFV V+Q + + Y LL F ++ K D
Sbjct: 55 QYQEATQYSIVFVVVFQDLKCMAYSQSLLNSAHNIFLNLFKEKLED 100
>SGD|S000002700 [details] [associations]
symbol:SRP101 "Signal recognition particle (SRP) receptor
alpha subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005525
"GTP binding" evidence=IEA;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA;IC;TAS]
[GO:0005047 "signal recognition particle binding" evidence=ISS;IMP]
[GO:0005785 "signal recognition particle receptor complex"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0045047 "protein targeting to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SGD:S000002700 GO:GO:0005525
EMBL:BK006938 GO:GO:0017111 SUPFAM:SSF64356 EMBL:U51031
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 RefSeq:NP_010578.3
GeneID:851886 KEGG:sce:YDR292C KO:K13431 RefSeq:NP_010582.3
GeneID:851890 KEGG:sce:YDR296W GO:GO:0005785 TCDB:3.A.5.8.1
GO:GO:0005047 PDB:1NRJ PDBsum:1NRJ HOGENOM:HOG000201671
GeneTree:ENSGT00550000074936 OrthoDB:EOG42Z7ZQ EMBL:M77274
PIR:S70121 ProteinModelPortal:P32916 SMR:P32916 DIP:DIP-1672N
IntAct:P32916 MINT:MINT-364995 STRING:P32916 PaxDb:P32916
PeptideAtlas:P32916 EnsemblFungi:YDR292C CYGD:YDR292c OMA:HVENLAQ
EvolutionaryTrace:P32916 NextBio:969862 Genevestigator:P32916
GermOnline:YDR292C InterPro:IPR015284 Pfam:PF09201 Uniprot:P32916
Length = 621
Score = 215 (80.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 65/239 (27%), Positives = 118/239 (49%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGK 327
++ + +S D+ ++ +AK +G+ S+ F + + G
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGN 303
Query: 328 ANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAME 387
++++DL+ L+ L +L+TKNVA E A+ L + V+ L G K A++T + + + ++
Sbjct: 304 KTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLT 363
Query: 388 EALVRILTPRRSIDILRDVHAAK----EQRK--PYXXXXXXXXXXXKSTNLAKVKLIIL 440
+AL +ILTP S+D+LR++ + + E+ K PY KSTNL+K+ +L
Sbjct: 364 KALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLL 422
Score = 48 (22.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCL---LEERSGLASFNYD 51
M +QL +FT G +L+ LG I++ I + + + +A+ N D
Sbjct: 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTD 54
>CGD|CAL0003010 [details] [associations]
symbol:orf19.3952 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045047 "protein targeting to ER" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 CGD:CAL0003010 GO:GO:0005525
GO:GO:0003924 EMBL:AACQ01000012 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
RefSeq:XP_721861.1 ProteinModelPortal:Q5AK68 STRING:Q5AK68
GeneID:3636513 KEGG:cal:CaO19.3952 Uniprot:Q5AK68
Length = 535
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
+G+FS + + G N+D+ K +++L+TKN+ IA + + + L K
Sbjct: 228 SGFFSKISSYLGGTINVDEVS-----KKFREQLITKNITPGIATTIIDKIKTKLSANKKV 282
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKE-QRKPYXXXXXXXXXXXKSTNL 432
+ ++ + A+ + L +ILTP S D+L D+ E +PY KSTNL
Sbjct: 283 TM----AVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRPYVISVVGVNGVGKSTNL 338
Query: 433 AKV 435
AK+
Sbjct: 339 AKL 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 444 370 0.00086 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 607 (65 KB)
Total size of DFA: 221 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.87u 0.11s 28.98t Elapsed: 00:00:02
Total cpu time: 28.88u 0.11s 28.99t Elapsed: 00:00:02
Start: Fri May 10 14:03:29 2013 End: Fri May 10 14:03:31 2013