BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013365
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/448 (79%), Positives = 392/448 (87%), Gaps = 12/448 (2%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL 60
MAE AA E AP R VL+ISAGASHSVALLSG+IVCSWGRGEDGQLGHGDAEDR
Sbjct: 1 MAEDMAADE----VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP 56
Query: 61 SPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA 120
SPTQLSALDGH+IVSVTCGADHT AYS+S M+VYSWGWGDFGRLGHGNSSDLFTPLPIKA
Sbjct: 57 SPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA 116
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKM 180
LH +R+KQIACGDSHCLAVT+EGEVQSWGRNQNGQLGLG TEDSLVPQK+QAFEG+ IKM
Sbjct: 117 LHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKM 176
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWR 240
VAAGAEH+ AV EDG+LYGWGWGRYGNLGLGDR DRL+PE+V + EKM MVACGWR
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG--GEKMSMVACGWR 234
Query: 241 HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSD 300
HTISVS SG LY+YGWSKYGQLGHGD +DHL+P +LEAL SFISQISGGWRHTMA+TSD
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 301 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLD----QISCGWRHTLAVTERQNVFSWGR 356
GKLYGWGWNKFGQVGVG+N+D CSPVQV+FP D Q+SCGWRHTLAVTER NVF+WGR
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 357 GTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVSPSERYAVVPDDT 416
GTNGQLG GES DRN PKIIE LS+DG+ GQ+I SS DPSSGK+WVSP+ERYAVVPD+T
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDET 414
Query: 417 VQGQTSVTGRGNGSEVSVPEGDVKRIRV 444
G T + +GNG ++SVP+ DVKR+R+
Sbjct: 415 --GLTDGSSKGNGGDISVPQTDVKRVRI 440
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 221/427 (51%), Gaps = 24/427 (5%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V+CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLGH-GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLGT + PQ L++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
++G LGL D NDR +P + + L+ +K+V + CG HT +++ G ++++G YGQ
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNV 320
LGH + P ++ L S +++I+ G +HT A V S G++Y +G GQ+G G
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 321 DHCSPVQVK---FPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIE 377
+ SP VK +P + L + + F R +G G S +SP+
Sbjct: 334 NRKSPFTVKGNWYPYNG------QCLPDIDSEEYFCVKRIFSG--GDQSFSHYSSPQNCG 385
Query: 378 PLSLDGSKGQNIASSKYDPSSG--KTWVS-PSERYAVVPDDTVQGQTSVTGRGNGSEVSV 434
P D + N + + + W+S PS R+ V + + G S +G NGS ++V
Sbjct: 386 P--PDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAV 443
Query: 435 PEGDVKR 441
D R
Sbjct: 444 SNDDHYR 450
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 189/349 (54%), Gaps = 17/349 (4%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + + V CG HT + VY+
Sbjct: 1 MLC-WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + ++CG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG D
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 215 DRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPC 274
+ P+ + + L + VA G H+ ++ SG ++ +G +K+GQLG D D VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 275 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPL-- 332
L++LR I I G HT A+T +G ++ +G +GQ+G +P +V F L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FELMG 293
Query: 333 ---DQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIE 377
+I+CG +HT A V ++S+G G NGQLG G +S+R SP ++
Sbjct: 294 SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 170/321 (52%), Gaps = 21/321 (6%)
Query: 96 WGWGDFGRLGHGNSSDLFTPLPIKA--LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQN 153
WG FG+LG G + P K+ + RV+ + CG H + V +G V + G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 154 GQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL-GD 212
GQLG + P+++ A + +I V+ G H++A+ + G++Y WG G LGL G
Sbjct: 64 GQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 213 RNDRLIPEKVATV-DLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDH 270
+P + ++ D+Q +V VACG+ H++++S + ++ +G +KYGQLG G D K
Sbjct: 122 EECIRVPRNIKSLSDIQ---IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178
Query: 271 LVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 330
P L++L Q++ G H+ +T G ++GWG NKFGQ+G+ D D P +K
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 331 PLDQ----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKG 386
Q I CG HT A+T+ VF++G G GQLGH +S +P+ + L GS
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIV 296
Query: 387 QNIA-----SSKYDPSSGKTW 402
IA +S + PSSG+ +
Sbjct: 297 TEIACGRQHTSAFVPSSGRIY 317
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 136/248 (54%), Gaps = 6/248 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDGHEIVSVTCG 79
++ +S G +H++AL V +WG DGQLG +E+ + P + +L +IV V CG
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT-PLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G T P +K+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS-VSSSGRLYSYGWS 257
+G G YG LG + + P KV +L + +ACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 258 KYGQLGHG 265
GQLG G
Sbjct: 323 GNGQLGTG 330
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V +IACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ I G H+ AL V ++G G GQLGH ++P ++ L G + + C
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 301
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
G HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 175/309 (56%), Gaps = 8/309 (2%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V+CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLG-HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLG + PQ +++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
++G LGL D NDR +P + + L+ +K+V + CG HT +++ G ++++G YGQ
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNV 320
LGH + P ++ L S ++QI+ G +HT A V S G++Y +G GQ+G G
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 321 DHCSPVQVK 329
+ SP VK
Sbjct: 334 NRKSPFTVK 342
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 224/457 (49%), Gaps = 61/457 (13%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + ++ V CG HT + VY+
Sbjct: 1 MLC-WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGT-VYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + ++CG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 215 DRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPC 274
+ P+ + + L + VA G H+ ++ SG ++ +G +K+GQLG D D VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 275 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPL-- 332
L++LR I I G HT A+T +G ++ +G +GQ+G +P +V F L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FELMG 293
Query: 333 ---DQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP--LSLDGSKG 386
QI+CG +HT A V ++S+G G NGQLG G +S+R SP ++ S +G
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCP 353
Query: 387 QNIASSKY--------------------------------DPSSG---------KTWVS- 404
Q+I S Y DPS + W+S
Sbjct: 354 QDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVNEALIQKWLSY 413
Query: 405 PSERYAVVPDDTVQGQTSVTGRGNGSEVSVPEGDVKR 441
PS R+ V + + G S +G NGS ++V D R
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR 450
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 134/248 (54%), Gaps = 6/248 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG-HGDAEDRLSPTQLSALDGHEIVSVTCG 79
++ +S G +H++AL V +WG DGQLG G E P + +L +IV V CG
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT-PLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G T P IK+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS-VSSSGRLYSYGWS 257
+G G YG LG + + P KV +L + +ACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 258 KYGQLGHG 265
GQLG G
Sbjct: 323 GNGQLGTG 330
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V QIACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ I G H+ AL V ++G G GQLGH ++P ++ L G + + C
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIAC 301
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
G HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 174/309 (56%), Gaps = 8/309 (2%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLG-HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLG + PQ +++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
++G LGL D NDR +P + + L+ +K+V + CG HT +++ G ++++G YGQ
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNV 320
LGH + P ++ L S ++Q++ G +HT A V S G++Y +G GQ+G G
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 321 DHCSPVQVK 329
+ SP VK
Sbjct: 334 NRKSPFTVK 342
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 224/457 (49%), Gaps = 61/457 (13%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + ++ V CG HT + VY+
Sbjct: 1 MLC-WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGT-VYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + +ACG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG D
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 215 DRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPC 274
+ P+ + + L + VA G H+ ++ SG ++ +G +K+GQLG D D VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 275 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPL-- 332
L++LR I I G HT A+T +G ++ +G +GQ+G +P +V F L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FELMG 293
Query: 333 ---DQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP--LSLDGSKG 386
Q++CG +HT A V ++S+G G NGQLG G +S+R SP ++ S +G
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCP 353
Query: 387 QNIASSKY--------------------------------DPSSG---------KTWVS- 404
Q+I S Y DPS + W+S
Sbjct: 354 QDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVNEALIQKWLSY 413
Query: 405 PSERYAVVPDDTVQGQTSVTGRGNGSEVSVPEGDVKR 441
PS R+ V + + G S +G NGS +++ D R
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYR 450
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 135/248 (54%), Gaps = 6/248 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG-HGDAEDRLSPTQLSALDGHEIVSVTCG 79
++ ++ G +H++AL V +WG DGQLG G E P + +L +IV V CG
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G + +P IK+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS-VSSSGRLYSYGWS 257
+G G YG LG + + P KV +L + VACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 258 KYGQLGHG 265
GQLG G
Sbjct: 323 GNGQLGTG 330
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V Q+ACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ I G H+ AL V ++G G GQLGH ++P ++ L G + V C
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
G HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 179/314 (57%), Gaps = 10/314 (3%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V ++ G +HSV LL V + G GQLGH ++ P Q+ AL I+ V C
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVAC 91
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHSLRVKQIACGDSHCL 137
G H+ A S+ Q++SWG G G+LG + D + P I+ L+ + Q++CG+ HCL
Sbjct: 92 GESHSLALSDRG-QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
A+ +G+ +WG+N +GQLGLG S PQ++++ EG+ + VAAG HS A++ G
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
++GWG G LGL D DR P V L+ +K+V ++CG HT ++ SG ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 257 SKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVG 315
GQLGH D + P ++ L S ++QI+ G +HT+A V S G +Y +G GQ+G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Query: 316 VGD--NVDHCSPVQ 327
G NV SPV+
Sbjct: 329 TGHTCNVKCPSPVK 342
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 12/312 (3%)
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG 132
+ V CG +H+ E +VY+ G G+LGH + P I AL + +ACG
Sbjct: 36 VKEVACGGNHSVFLLEDG-EVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACG 92
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAV 191
+SH LA++ G++ SWG +GQLGL TTEDS+ VP+ +Q +I V+ G H +A+
Sbjct: 93 ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 152
Query: 192 AEDGELYGWGWGRYGNLGLG-DRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGR 250
A DG+ + WG +G LGLG + + P++V + L+ + VA G H+ ++S SG
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALSLSGA 210
Query: 251 LYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNK 310
++ +G + GQLG D KD PC ++ LR + IS G HT +T G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 311 FGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLAVTERQN-VFSWGRGTNGQLGHG 365
GQ+G D +P +V + QI+CG +HTLA ++++G G GQLG G
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 366 ESSDRNSPKIIE 377
+ + P ++
Sbjct: 331 HTCNVKCPSPVK 342
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P+ ++AG +HS AL V WG GQLG D +DR SP + L ++V ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
+HT ++S V+++G G G+LGH + +D P + L V QIACG H LA
Sbjct: 251 EEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF 173
V G + ++G GQLG G T + P ++ +
Sbjct: 310 VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 8/319 (2%)
Query: 4 ASAASEAASTTAAP-FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSP 62
A A AAP F + G + + + + V + G G G+LG G+++D
Sbjct: 4011 AEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVL 4070
Query: 63 TQLSALDGHEIVSV--TCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
T +SAL G + + +CG+D H+ A +ES +V+SWG GD+G+LGHGNS P I+
Sbjct: 4071 TVISALQGFVVTQLVTSCGSDGHSMALTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIE 4129
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
AL V Q++CG H VT +G++ ++G G+LGLG T + +P+++ A EG I
Sbjct: 4130 ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4189
Query: 180 MVAAGAEHSVAVAEDGEL-YGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACG 238
VA G H++AV+ DG + + +G G YG LGLG+ + P+K+ L + VACG
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKKVACG 4247
Query: 239 WRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVT 298
+ +++++ G +Y++G + L G ++H P Q+ L I ++ G HT+A+
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307
Query: 299 SDGKLYGWGWNKFGQVGVG 317
S+G +Y WG N GQ+G+G
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG 4326
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 196/371 (52%), Gaps = 19/371 (5%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG G GQL + + P +A + V CG + T ++ V + G G +G
Sbjct: 4002 WGAGRHGQLAEA-GRNVMVPA--AAPSFSQAQQVICGQNCTFVI-QANGTVLACGEGSYG 4057
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQI--ACG-DSHCLAVTVEGEVQSWGRNQNGQLGLG 159
RLG GNS DL I AL V Q+ +CG D H +A+T GEV SWG G+LG G
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117
Query: 160 TTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
++ P++++A +G + ++ G +HS V DG+L+ +G G YG LGLG+ +++ +P
Sbjct: 4118 NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP 4177
Query: 220 EKVATVDLQREKMVMVACGWRHTISVSSSGRL-YSYGWSKYGQLGHGDFKDHLVPCQLEA 278
E+V L+ ++ VACG HT++VS+ G + +++G YG+LG G+ P +++
Sbjct: 4178 ERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV 4235
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF----PLDQ 334
L I +++ G + ++A+T DG +Y +G ++ + G +H P Q+ ++
Sbjct: 4236 LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIED 4295
Query: 335 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKY 394
++ G HTLA+ +V++WG + GQLG G ++ + EP + G +G+N+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTN-----HVREPTLVTGLQGKNVRQISA 4350
Query: 395 DPSSGKTWVSP 405
W +P
Sbjct: 4351 GRCHSAAWTAP 4361
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 178/381 (46%), Gaps = 20/381 (5%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG QL G E L P + + + + T + V + G G
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE---AGQYCTFVISTDGSVRACGKG 430
Query: 100 DFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG---DSHCLAVTVEGEVQSWGRNQNGQL 156
+GRLG G+S++ T + +K+++ D H LA T EGEV SWG G+L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 157 GLGTTEDSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
G G + P+ +Q +G + V+AG HS AV EDGELY WG G +G LG GD N
Sbjct: 491 GHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS 550
Query: 216 RLIPEKVATVDLQREKMVMVACGWRHTISVSSSGR-LYSYGWSKYGQLGHGDFKDHLVPC 274
R IP V + E V+CG HTI++S GR ++S+G G+LGHGD P
Sbjct: 551 RNIPTLVKDISNVGE----VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPK 606
Query: 275 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ 334
+EAL+ FI ++ G + ++A+TS G++Y WG G + + + +
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATR 666
Query: 335 I---SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
I S G H LA++ V++WG + GQ G G S+ I +P + G G I
Sbjct: 667 IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG----PITKPKKVSGLDGIAIQQ 722
Query: 392 SKYDPSSGKTWVS-PSERYAV 411
S W + P +R V
Sbjct: 723 ISAGTSHSLAWTALPRDRQVV 743
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 161/280 (57%), Gaps = 5/280 (1%)
Query: 22 LLISAGAS-HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
L+ S G+ HS+AL V SWG G+ G+LGHG+++ + P Q+ AL G E+V ++CG
Sbjct: 4084 LVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4143
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
H+ A S +++++G GD+GRLG GN+S+ P + AL ++ Q+ACG +H LAV+
Sbjct: 4144 KHS-AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Query: 141 VEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
+G V ++G G+LGLG + PQK+ G+ IK VA G + SVA+ +DG +Y
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKY 259
+G R L G + P+++ L + VA G HT++++S+G +Y++G +
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPV--LAGVIIEDVAVGAEHTLALASNGDVYAWGSNSE 4320
Query: 260 GQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
GQLG G P + L+ + QIS G H+ A T+
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 170/315 (53%), Gaps = 15/315 (4%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGAS---HSVALLSGNIVCSWGRGEDGQLGHGDAE 57
+ +++ S T P R + +S+ H++A + V SWG G+ G+LGHG++
Sbjct: 437 LGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSS 496
Query: 58 DRLSPTQLS-ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPL 116
+ P + L G +V V+ G H+ A +E ++Y+WG GDFGRLGHG+S+ P
Sbjct: 497 TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG-ELYTWGEGDFGRLGHGDSNSRNIPT 555
Query: 117 PIKALHSLRVKQIACGDSHCLAVTVEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEG 175
+K + + V +++CG SH +A++ +G V S+G NG+LG G T P+ ++A +G
Sbjct: 556 LVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQG 613
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMV 235
+ I+ V AG++ S+A+ G++Y WG G LG G + K+ +L ++V V
Sbjct: 614 MFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE-ELAATRIVDV 670
Query: 236 ACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQISGGWRHT 294
+ G H +++S +Y++G + GQ G G+ + P ++ L I QIS G H+
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 295 MAVTS---DGKLYGW 306
+A T+ D ++ W
Sbjct: 731 LAWTALPRDRQVVAW 745
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 148/273 (54%), Gaps = 7/273 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ +S G HS + S + ++G G+ G+LG G+ ++ P +++AL+G++I V CG
Sbjct: 4136 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4195
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
+HT A S V+++G GD+G+LG GNS+ +P I L + +K++ACG +A+T
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGW 200
+G V ++G+++ L G + PQ++ GV I+ VA GAEH++A+A +G++Y W
Sbjct: 4256 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 201 GWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS-VSSSGRLYSYGWSKY 259
G G LGLG N + E LQ + + ++ G H+ + + + G S
Sbjct: 4316 GSNSEGQLGLGHTNH--VREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373
Query: 260 GQLGHGDFKDHLVPCQLEALRESFISQISGGWR 292
QLG D VP Q ALRE I + R
Sbjct: 4374 LQLGLPD----TVPPQYGALREVSIHTVRARLR 4402
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 182/355 (51%), Gaps = 19/355 (5%)
Query: 15 AAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI- 73
A F I AG + + + V + G+G G+LG GD+ ++ + +L+ I
Sbjct: 399 APSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 74 -VSVTCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHSLRVKQIA 130
VS + G+D HT A++ +V+SWG GD+G+LGHGNSS P I+ L V ++
Sbjct: 459 KVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 131 CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA 190
G H AVT +GE+ +WG G+LG G + +P ++ V V+ G+ H++A
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIA 575
Query: 191 VAEDGE-LYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSG 249
+++DG ++ +G G G LG GD N P+ + LQ + V G + +++++S+G
Sbjct: 576 LSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIRKVCAGSQSSLALTSTG 633
Query: 250 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 309
++Y++G G + L P +E L + I +S G H +A++ D ++Y WG N
Sbjct: 634 QVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNN 692
Query: 310 KFGQVGVGDNVDHCS-PVQVK----FPLDQISCGWRHTL---AVTERQNVFSWGR 356
GQ G G++ + P +V + QIS G H+L A+ + V +W R
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 12/191 (6%)
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYG 255
++Y WG GR+G L RN ++P + ++ V CG T + ++G + + G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQ----VICGQNCTFVIQANGTVLACG 4052
Query: 256 WSKYGQLGHGDFKDHLVPCQLEALRESFISQI---SGGWRHTMAVTSDGKLYGWGWNKFG 312
YG+LG G+ D V + AL+ ++Q+ G H+MA+T G+++ WG +G
Sbjct: 4053 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 313 QVGVGDNVDHCSPVQVKF----PLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 368
++G G++ P Q++ + Q+SCG++H+ VT +F++G G G+LG G +S
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTS 4172
Query: 369 DRNSPKIIEPL 379
++ P+ + L
Sbjct: 4173 NKKLPERVTAL 4183
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 157/278 (56%), Gaps = 5/278 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+++G H +AL + V +WG GEDG+LGHG+ P + L+G + + CG+ H+
Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTV 141
A + S V +WG G +GRLGHG+S D P ++AL R IAC GD+ L +T
Sbjct: 4201 AAITASG-HVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+ V SWG G+LG G ++ +P K+++ G+ + V G++ SVA+ + G +Y WG
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
G + LG G + P+KVA LQ +K++ +A G H ++ S SG +Y++G + GQ
Sbjct: 4320 KGDFHRLGHGSVDHVRRPKKVAA--LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 4377
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
LG G P + AL+ I +++ G HT+A+++
Sbjct: 4378 LGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 158/275 (57%), Gaps = 5/275 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H++AL V SWG GEDG+LGHG+ P + AL +I V CG+ H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A S S ++Y+WG G++GRLGHG+++ P + AL RV Q+ACG D+ LA+T
Sbjct: 3138 AAIS-SQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE 3196
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+G V SWG G+LG G +E S P +++ G+ + + GA+ S+A+ GE++ WG
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
G Y LG G P+ + L+ +++ VA G H ++V+ +G++Y++G + +GQ
Sbjct: 3257 KGDYYRLGHGGDQHVRKPQPIG--GLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 296
G G+ + P + L F+++++ G H++A
Sbjct: 3315 QGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 11/345 (3%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG PT + + + G+ S+ +VY+ G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDG-KVYACGEG 3046
Query: 100 DFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLG 157
GRLG G + ++ P + L VK++A G H LA+T++G+V SWG ++G+LG
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Query: 158 LGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL 217
G P+ ++A I+ VA G+ HS A++ GELY WG G YG LG GD +L
Sbjct: 3107 HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166
Query: 218 IPEKVATVDLQREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQ 275
P+ V L ++V VACG R T++++ G ++S+G +G+LG G + P +
Sbjct: 3167 KPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHE 3224
Query: 276 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV----KFP 331
+E L + QI G + ++A+T G+++ WG + ++G G + P +
Sbjct: 3225 IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRR 3284
Query: 332 LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKII 376
+ ++ G H LAVT+ V++WG +GQ G G + P ++
Sbjct: 3285 VIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 11/296 (3%)
Query: 62 PTQLSALDGHEI--VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
PT L +L + V+V G H A + +VY+WG G+ G+LGHGN P ++
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEG-EVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
L+ + V IACG +H A+T G V +WG+ + G+LG G +ED L P+ ++A G
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAI 4243
Query: 180 MVAAGA--EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVAC 237
+A G+ ++ + +D ++ WG G YG LG G + +P K+ + L +V V C
Sbjct: 4244 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVEC 4301
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 297
G + +++++ SG +Y++G + +LGHG P ++ AL+ I I+ G H +A
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4361
Query: 298 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP----LDQISCGWRHTLAVTERQ 349
+ G++Y WG N GQ+G G P V + +++CG HTLA++ Q
Sbjct: 4362 SDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQ 4417
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 3/226 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA-DH 82
I+ G++HS A+ + V +WG+G G+LGHGD+ED+L P + AL G+ + + CG+ D
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDA 4252
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
T V+SWG GD+G+LG G S P I++L L V ++ CG +A+T
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312
Query: 143 GEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGW 202
G V +WG+ +LG G+ + P+K+ A +G I +A G+ H VA ++ GE+Y WG
Sbjct: 4313 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 203 GRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
G LG G P VA LQ + +V V CG HT+++S+S
Sbjct: 4373 NDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCGSAHTLALSTS 4416
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 173/344 (50%), Gaps = 9/344 (2%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + +PT AL V + G A + ++++ G+G G
Sbjct: 4054 WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDG-KLFATGYGSGG 4112
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G S P + +L + VK++A G HCLA+T EGEV +WG ++G+LG G
Sbjct: 4113 RLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGN 4172
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ ++ G+S+ +A G+ HS A+ G + WG GRYG LG GD D+L P+
Sbjct: 4173 RMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK 4232
Query: 221 KVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALR 280
V + R + G T+ ++ ++S+G YG+LG G +P ++E+L
Sbjct: 4233 LVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA 4292
Query: 281 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC-SPVQVKF----PLDQI 335
+ ++ G + ++A+T G +Y WG F ++G G +VDH P +V + I
Sbjct: 4293 GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG-SVDHVRRPKKVAALQGKKIISI 4351
Query: 336 SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
+ G H +A ++ V++WG GQLG G + P+++ L
Sbjct: 4352 ATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAAL 4395
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 136/238 (57%), Gaps = 11/238 (4%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSES 89
H +A+ S + SWG GED +LGHGD R PT+++AL+ H + SV CG ++ A +
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI--T 684
Query: 90 C-MQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQ 146
C + +WG G + RLGHGNS D P + AL V +A GD+H LA+T EG V
Sbjct: 685 CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 147 SWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
+WG G+LG G SL P +++ ++ V AG++ SVA++ +G+LY WG
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCL 802
Query: 207 NLGLGDRNDR--LIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQL 262
L +R+ + +P V++ LQ +++V VA H +++SSSG ++ +G + Q+
Sbjct: 803 GHQLVERSVQGCSVPRLVSS--LQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 128/242 (52%), Gaps = 6/242 (2%)
Query: 145 VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
V WG N QLG VP Q + +A G++ V++DG++Y G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 205 YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 264
G LGLG ++ +P ++ + K V V G +H ++++ G+++S+G + G+LGH
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 265 GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS 324
G+ P +EALR I ++ G H+ A++S G+LY WG ++G++G GDN
Sbjct: 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167
Query: 325 PVQVKF----PLDQISCGWR--HTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP 378
P V + Q++CG R TLA+TE VFSWG G G+LG G S ++P IE
Sbjct: 3168 PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3227
Query: 379 LS 380
LS
Sbjct: 3228 LS 3229
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 19/282 (6%)
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
C H A +S YSWG G+ RLGHG++ P I AL V+ + CG S+
Sbjct: 623 CEGRHFLAI-DSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA--EHSVAVAEDG 195
A+T G + +WGR +LG G ++D +P + A + VA G+ HS+A+ +G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYG 255
++ WG G YG LG G+ N L P V ++ ++ V G + ++++SS G+LY+
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESL----PRVQRVFAGSQFSVALSSEGQLYT-- 795
Query: 256 WSKYGQLGHGDFKDHL----VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKF 311
W K LGH + + VP + +L+ I ++ H +A++S G+++GWG N
Sbjct: 796 WGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDS 855
Query: 312 GQV---GVGDNVDHCSPVQVK---FPLDQISCGWRHTLAVTE 347
Q+ V +P+ V FP I+C +L T+
Sbjct: 856 QQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQ 897
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 140/299 (46%), Gaps = 21/299 (7%)
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIA- 130
+I V C S+ ++Y+W RL + PLP++ + IA
Sbjct: 573 QIKQVACCETQMLILSQEG-KLYTW------RLAKPEAE----PLPMEEVAHDVFISIAG 621
Query: 131 -CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSV 189
C H LA+ SWG ++ +LG G T VP K+ A E ++ V G +S
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 190 AVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSG 249
A+ G L WG G Y LG G+ +DR +P V + V + G H+++++S G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 250 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 309
++++G YG+LG+G+ L P +E+L + ++ G + ++A++S+G+LY WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 310 K-FGQVGVGDNVDHCSPVQVKFPLDQ-----ISCGWRHTLAVTERQNVFSWGRGTNGQL 362
G V +V CS ++ L ++ H LA++ VF WGR + Q+
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 13 TTAAPFRPVLLISAGA--SHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG 70
TA R V+ ++ G+ + ++AL V SWG G+ G+LG G +E +P ++ L G
Sbjct: 3171 VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSG 3230
Query: 71 HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIA 130
+V + CGA + A + + +V++WG GD+ RLGHG + P PI L RV +A
Sbjct: 3231 IGVVQIECGAQFSLALTRAG-EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVA 3289
Query: 131 CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA 190
G HCLAVT G+V +WG N +GQ G G T + P + + V + VA G+ HS+A
Sbjct: 3290 VGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 119/217 (54%), Gaps = 20/217 (9%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA--D 81
+ G S+S A+ G + +WGRG +LGHG+++DR PT + AL H +V V G+
Sbjct: 673 VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDA 732
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
H+ A + + V++WG GD+G+LG+GN + P+ +++L RV+++ G +A++
Sbjct: 733 HSLALTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSS 789
Query: 142 EGEVQSWGRNQ--NGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
EG++ +WG+ QL + + VP+ + + + I VA H +A++ GE++G
Sbjct: 790 EGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Query: 200 WGWGRYGNLGLGDRND--RLIPEKVATVDLQREKMVM 234
WG RND ++ P V++ L R +++
Sbjct: 850 WG-----------RNDSQQICPASVSSEPLLRTPILV 875
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Query: 145 VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+ WG N GQLG P +A + +A G + AV DG+L+ G+G
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 205 YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 264
G LG+G + IP + ++ K V V G +H +++++ G +Y++G + G+LGH
Sbjct: 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 265 GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS 324
G+ + P +E L ++ I+ G H+ A+T+ G + WG ++G++G GD+ D
Sbjct: 4171 GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4230
Query: 325 PVQVKFPLD----QISCGW--RHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP 378
P V+ L I+CG TL +T+ NV+SWG G G+LG G S P IE
Sbjct: 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4290
Query: 379 LS 380
L+
Sbjct: 4291 LA 4292
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 129/246 (52%), Gaps = 18/246 (7%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFE-GVSIKMVA 182
++KQ+AC ++ L ++ EG++ +W L E +P + A + +SI
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW--------RLAKPEAEPLPMEEVAHDVFISIAGHC 623
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHT 242
G H +A+ + Y WG G LG GD + R +P K+A L++ + V CG ++
Sbjct: 624 EG-RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA--LEQHCVQSVYCGCSYS 680
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS--GGWRHTMAVTSD 300
+++ G L ++G Y +LGHG+ D +P + AL + + ++ G H++A+TS+
Sbjct: 681 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 301 GKLYGWGWNKFGQVGVGDNVDHCSPVQVK-FP-LDQISCGWRHTLAVTERQNVFSWGRGT 358
G ++ WG +G++G G+ P+ V+ P + ++ G + ++A++ +++WG+ T
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKAT 800
Query: 359 NGQLGH 364
LGH
Sbjct: 801 C--LGH 804
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISV 245
E + A +D WG LG + + + R + + +A G + V
Sbjct: 2975 EAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIV 3034
Query: 246 SSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKL 303
S G++Y+ G G+LG G + +P QL LR+ + +++ G +H +A+T DGK+
Sbjct: 3035 SQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKV 3094
Query: 304 YGWGWNKFGQVGVGDNVDHCSPVQVKF----PLDQISCGWRHTLAVTERQNVFSWGRGTN 359
+ WG + G++G G+ P V+ + ++CG H+ A++ + +++WG G
Sbjct: 3095 FSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY 3154
Query: 360 GQLGHGESSDRNSPKIIEPLS 380
G+LGHG+++ + PK++ L+
Sbjct: 3155 GRLGHGDNTTQLKPKLVTALA 3175
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 178 IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVA- 236
IK VA + ++++G+LY W + + L E+VA + + +A
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK-------PEAEPLPMEEVA-----HDVFISIAG 621
Query: 237 -CGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTM 295
C RH +++ S+ YS+G + +LGHGD VP ++ AL + + + G ++
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 296 AVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISC------GWRHTLAVTERQ 349
A+T G L WG + ++G G++ D P V D + G H+LA+T
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 350 NVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
VF+WG G G+LG+G + P ++E L
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESL 771
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ + G+ SVAL V +WG+G+ +LGHG + P +++AL G +I+S+ G+
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 4355
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
H A S+S +VY+WG D G+LG G + + P + AL + ++ CG +H LA++
Sbjct: 4356 LHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
+ N L D L P+ L A
Sbjct: 4415 TSQLSERLRPLPNPPLEYDLVRD-LAPEALHA 4445
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS 288
R ++ VAC + +S G+LY++ +K P +E + I+
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIA 620
Query: 289 GGW--RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV----KFPLDQISCGWRHT 342
G RH +A+ S+ Y WG + ++G GD P ++ + + + CG ++
Sbjct: 621 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYS 680
Query: 343 LAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLS 380
A+T N+ +WGRGT +LGHG S DR+ P ++ LS
Sbjct: 681 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ I+ G+ H VA V +WG ++GQLG G P ++AL G IV VTC
Sbjct: 4346 KKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTC 4405
Query: 79 GADHTTAYSES 89
G+ HT A S S
Sbjct: 4406 GSAHTLALSTS 4416
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V+ ++ GA H +A+ V +WG + GQ G G+ P + LD + V C
Sbjct: 3283 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVAC 3342
Query: 79 GADHTTAY 86
G+ H+ A+
Sbjct: 3343 GSSHSIAW 3350
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 187/375 (49%), Gaps = 19/375 (5%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG P+ L +V V G+ A + +VYS G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG-KVYSCGEA 3020
Query: 100 DFGRLGHGNSSDLFTPLP--IKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQ 155
GRLG G SS P+P I AL S VK++A G H A+TV+G+V SWG +G+
Sbjct: 3021 TNGRLGLGMSSGT-VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LG + + P+ ++A + I+ +A G+ HS A+ GELY WG G YG LG GD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3139
Query: 216 RLIPEKVATVDLQREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP 273
+L P+ V L +++ VACG R T++++ G ++S+G +G+LG G + +P
Sbjct: 3140 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3197
Query: 274 CQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK---- 329
+E L + QI G + ++A+T G ++ WG + ++G G +V P V+
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 330 FPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNI 389
+ ++ G H LAVT+ V++WG +GQ G+G ++ P +++ G +GQ I
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-----GLEGQKI 3312
Query: 390 ASSKYDPSSGKTWVS 404
S W +
Sbjct: 3313 TRVACGSSHSVAWTT 3327
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 157/278 (56%), Gaps = 5/278 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H+ AL V SWG G+DG+LGH + P + AL I + CG+ H+
Sbjct: 3053 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A + S ++Y+WG G++GRLGHG+++ P +K L RV Q+ACG D+ LA+T
Sbjct: 3113 AALTSSG-ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EG V SWG G+LG G +E +PQ ++ G + + GA+ S+A+ + G ++ WG
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3231
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
G Y LG G P+ V L+ +K+V VA G H ++V+ SG++Y++G + +GQ
Sbjct: 3232 KGDYFRLGHGSDVHVRKPQVVE--GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
G+G + P ++ L I++++ G H++A T+
Sbjct: 3290 QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 171/309 (55%), Gaps = 18/309 (5%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+V+ WG D +LG S + P + L +L V Q+A G AVTVEG+V S G
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 152 QNGQLGLGTTEDSL-VPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
NG+LGLG + ++ +P+++ A +K VA +G H+ A+ DG+++ WG G G L
Sbjct: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 209 GLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 268
G R + P + L+ +++ +ACG H+ +++SSG LY++G +YG+LGHGD
Sbjct: 3081 GHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 3138
Query: 269 DHLVPCQLEALRESFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 326
L P ++ L + Q++ G R T+A+T +G ++ WG FG++G G + + C+
Sbjct: 3139 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS-EGCNIP 3197
Query: 327 QVKFPLD-----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSL 381
Q L+ QI CG + +LA+T+ V++WG+G +LGHG P+++E
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE---- 3253
Query: 382 DGSKGQNIA 390
G +G+ I
Sbjct: 3254 -GLRGKKIV 3261
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 151/281 (53%), Gaps = 5/281 (1%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVT 77
F + +++G H +AL S V SWG EDG+LGHG+ P + +L G E+V V
Sbjct: 4040 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4099
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSH 135
G H+ + + +Y+WG G +GRLGH +S D P ++AL RV IAC GD+
Sbjct: 4100 AGGAHSACVT-AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQ 4158
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDG 195
L +T + V SWG G+LG G ++ VP K+ + G+ + V G++ SVA+ + G
Sbjct: 4159 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG 4218
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYG 255
+Y WG G Y LG G + P +V LQ +K++ +A G H + + G +Y++G
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 256 WSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 296
+ GQLG G P + AL+ +++++ G HT+A
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 186/357 (52%), Gaps = 15/357 (4%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + PT AL V + G + T + ++Y+ G+G G
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 4017
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G + + TP ++++ + +K++A G HCLA++ EGEV SWG ++G+LG G
Sbjct: 4018 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 4077
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ +++ G+ + VAAG HS V G+LY WG GRYG LG D D+L P+
Sbjct: 4078 RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4137
Query: 221 KVATVDLQREKMVMVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA 278
V LQ +++ +ACG T+ ++ ++S+G YG+LG G VP ++++
Sbjct: 4138 LVEA--LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS 4195
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC-SPVQVK----FPLD 333
L + ++ G + ++A+T G +Y WG + ++G G + DH P QV+ +
Sbjct: 4196 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVI 4254
Query: 334 QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 390
I+ G H + TE V++WG GQLG G ++ P+++ +L G K +A
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA--ALQGKKVNRVA 4309
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 129/229 (56%), Gaps = 3/229 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ ++AG +HS + + + +WG+G G+LGH D+ED+L P + AL GH ++ + CG+
Sbjct: 4095 VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGS 4154
Query: 81 -DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
D T V+SWG GD+G+LG G S P+ I +L L V ++ CG +A+
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
T G V +WG+ +LG G+ + P+++Q +G + +A G+ H V EDGE+Y
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4274
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
WG G LG G N P VA LQ +K+ VACG HT++ S+S
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHTLAWSTS 4321
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ I+ G+++S A+ + + +WGRG G+LGHG +ED P ++ L G +++ V CG+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613
Query: 81 --DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
T A +E+ QV+SWG GD+G+LG G S TP I+ L L V ++ CG +A
Sbjct: 614 GDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G+V SWG+ N +LG GT E P+ L+ +G + VAAG+ H +A+ ED E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSS 247
WG R + PE A L + +V +ACG + + SS
Sbjct: 733 SWGSNDQCQHFDTLRVTK--PEPTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 173/368 (47%), Gaps = 46/368 (12%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ P Q L ++ V C S + +VY+ + +SD+ P ++
Sbjct: 441 IGPIQCEGLASLGVMQVACAEKRFLILSRNG-RVYTQAY----------NSDMLAPQLVQ 489
Query: 120 ALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS 177
L S + +IA H LA+ GEV SWG G+LG G T P+ + AF G
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 549
Query: 178 ----IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMV 233
+ +A G+ +S A+ +GELY WG G YG LG G D IP VA L+ K++
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA--GLKGLKVI 607
Query: 234 MVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGW 291
VACG T++V+ +G+++S+G YG+LG G P +E L++ + ++ G
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS 667
Query: 292 RHTMAVTSDGKLYGWGWNKFGQVGVGDN--VDHCSPVQVKFP----------LDQISCGW 339
+ ++A+T DG++Y W G GDN + H + V++P + ++ G
Sbjct: 668 QFSIALTKDGQVYSW--------GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719
Query: 340 RHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSG 399
H LA+TE V SW G+N Q H ++ P EP +L G ++I P+
Sbjct: 720 THCLALTEDSEVHSW--GSNDQCQHFDTLRVTKP---EPTALPGLDSKHIVGIACGPAQS 774
Query: 400 KTWVSPSE 407
W S SE
Sbjct: 775 FAWSSCSE 782
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 66/310 (21%)
Query: 143 GEVQSWGRNQNGQLG---------------LGT--------------------------- 160
G + WG N GQLG L T
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 161 ----------TEDSLVPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
TE P L++ + V IK VA +G +H +A++ +GE+Y WG G L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 209 GLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 268
G G+R+ P + + L+ ++V VA G H+ V+++G LY++G +YG+LGH D +
Sbjct: 4074 GHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE 4131
Query: 269 DHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-P 325
D L P +EAL+ + I+ G T+ +T D ++ WG +G++G G + D C P
Sbjct: 4132 DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVP 4190
Query: 326 VQVK----FPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSL 381
+++ + ++ CG + ++A+T+ V++WG+G +LGHG P+ ++ L
Sbjct: 4191 MKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GL 4248
Query: 382 DGSKGQNIAS 391
G K IA+
Sbjct: 4249 QGKKVIAIAT 4258
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V I GA S+AL +V +WG+G+ +LGHG P + L G +IV V GA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
H A ++S QVY+WG D G+ G+G ++ P ++ L ++ ++ACG SH +A
Sbjct: 3268 LHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 242 TISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG 301
T+S SG +Y +G + GQLG + VP EAL Q+ GG + AVT+DG
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 302 KLYGWGWNKFGQVGVGDNVDHCSPV------QVKFPLDQISCGWRHTLAVTERQNVFSWG 355
KLY G+ G++G+G +P V ++ G +H LA++ V+SWG
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 356 RGTNGQLGHGESSDRNSPKIIEPL 379
+G+LGHG S + P++IE L
Sbjct: 4067 EAEDGKLGHGNRSPCDRPRVIESL 4090
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ V+ I+ G+ H V V +WG ++GQLG G P ++AL G ++ V C
Sbjct: 4251 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4310
Query: 79 GADHTTAYSES 89
G+ HT A+S S
Sbjct: 4311 GSAHTLAWSTS 4321
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ ++ GA H +A+ V +WG + GQ G+G PT + L+G +I V C
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 79 GADHTTAYS 87
G+ H+ A++
Sbjct: 3318 GSSHSVAWT 3326
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 157/278 (56%), Gaps = 5/278 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H+ AL V SWG G+DG+LGH + P + AL I + CG+ H+
Sbjct: 3052 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A + S ++Y+WG G++GRLGHG+++ P +K L RV Q+ACG D+ LA+T
Sbjct: 3112 AALTSSG-ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EG V SWG G+LG G +E +PQ ++ G + + GA+ S+A+ + G ++ WG
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3230
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 261
G Y LG G P+ V L+ +K+V VA G H ++V+ SG++Y++G + +GQ
Sbjct: 3231 KGDYFRLGHGSDVHVRKPQVVE--GLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 262 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
G+G + P ++ L I++++ G H++A T+
Sbjct: 3289 QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 187/375 (49%), Gaps = 19/375 (5%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG P+ L +V V G+ A + +VY+ G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG-KVYACGEA 3019
Query: 100 DFGRLGHGNSSDLFTPLP--IKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQ 155
GRLG G SS P+P I AL S VK++A G H A+TV+G+V SWG +G+
Sbjct: 3020 TNGRLGLGISSGT-VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LG + + P+ ++A + I+ +A G+ HS A+ GELY WG G YG LG GD
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3138
Query: 216 RLIPEKVATVDLQREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP 273
+L P+ V L +++ VACG R T++++ G ++S+G +G+LG G + +P
Sbjct: 3139 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3196
Query: 274 CQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK---- 329
+E L + QI G + ++A+T G ++ WG + ++G G +V P V+
Sbjct: 3197 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 330 FPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNI 389
+ ++ G H LAVT+ V++WG +GQ G+G ++ P +++ G +GQ I
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-----GLEGQKI 3311
Query: 390 ASSKYDPSSGKTWVS 404
S W +
Sbjct: 3312 TRVACGSSHSVAWTT 3326
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 171/309 (55%), Gaps = 18/309 (5%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+V+ WG D +LG S + P + L +L V Q+A G AVTVEG+V + G
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3019
Query: 152 QNGQLGLGTTEDSL-VPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
NG+LGLG + ++ +P+++ A +K VA +G H+ A+ DG+++ WG G G L
Sbjct: 3020 TNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 209 GLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 268
G R + P + L+ +++ +ACG H+ +++SSG LY++G +YG+LGHGD
Sbjct: 3080 GHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 3137
Query: 269 DHLVPCQLEALRESFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 326
L P ++ L + Q++ G R T+A+T +G ++ WG FG++G G + + C+
Sbjct: 3138 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS-EGCNIP 3196
Query: 327 QVKFPLD-----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSL 381
Q L+ QI CG + +LA+T+ V++WG+G +LGHG P+++E
Sbjct: 3197 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE---- 3252
Query: 382 DGSKGQNIA 390
G +G+ I
Sbjct: 3253 -GLRGKKIV 3260
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 151/281 (53%), Gaps = 5/281 (1%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVT 77
F + +++G H +AL S V SWG EDG+LGHG+ P + +L G E+V V
Sbjct: 4038 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4097
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSH 135
G H+ + + +Y+WG G +GRLGH +S D P ++AL RV IAC GD+
Sbjct: 4098 AGGAHSACVT-AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 4156
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDG 195
L +T + V SWG G+LG G ++ VP K+ + G+ + V G++ SVA+ + G
Sbjct: 4157 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG 4216
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYG 255
+Y WG G Y LG G + P +V LQ +K++ +A G H + + G +Y++G
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 256 WSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 296
+ GQLG G P + AL+ +++++ G HT+A
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 186/357 (52%), Gaps = 15/357 (4%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + PT AL V + G + T + ++Y+ G+G G
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 4015
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G + + TP ++++ + +K++A G HCLA++ EGEV SWG ++G+LG G
Sbjct: 4016 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 4075
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ +++ G+ + VAAG HS V G+LY WG GRYG LG D D+L P+
Sbjct: 4076 RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4135
Query: 221 KVATVDLQREKMVMVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA 278
V LQ ++V +ACG T+ ++ ++S+G YG+LG G VP ++++
Sbjct: 4136 LVEA--LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS 4193
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC-SPVQVK----FPLD 333
L + ++ G + ++A+T G +Y WG + ++G G + DH P QV+ +
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVI 4252
Query: 334 QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 390
I+ G H + TE V++WG GQLG G ++ P+++ +L G K +A
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA--ALQGKKVNRVA 4307
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 3/229 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ ++AG +HS + + + +WG+G G+LGH D+ED+L P + AL GH +V + CG+
Sbjct: 4093 VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGS 4152
Query: 81 -DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
D T V+SWG GD+G+LG G S P+ I +L L V ++ CG +A+
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
T G V +WG+ +LG G+ + P+++Q +G + +A G+ H V EDGE+Y
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4272
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
WG G LG G N P VA LQ +K+ VACG HT++ S+S
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHTLAWSTS 4319
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ I+ G+++S A+ + + +WGRG G+LGHG +ED P ++ L G +++ V CG+
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 612
Query: 81 --DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
T A +E+ QV+SWG GD+G+LG G S TP I+ L L V ++ CG +A
Sbjct: 613 GDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G+V SWG+ N +LG GT E P+ L+ +G + VAAG+ H +A+ ED E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSS 247
WG R + PE A L + +V +ACG + + SS
Sbjct: 732 SWGSNDQCQHFDTLRVTK--PEPAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 130/250 (52%), Gaps = 7/250 (2%)
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGEL 197
A T+ +V WG N QLG VP + +++ VA G++ AV +G++
Sbjct: 2954 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 198 YGWGWGRYGNLGLGDRNDRL-IPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
Y G G LGLG + + IP ++ + K V V G RH +++ G+++S+G
Sbjct: 3014 YACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3073
Query: 257 SKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 316
G+LGH + P +EAL+ I I+ G H+ A+TS G+LY WG ++G++G
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH 3133
Query: 317 GDNVDHCSPVQVKFPLD----QISCGWR--HTLAVTERQNVFSWGRGTNGQLGHGESSDR 370
GDN P VK L Q++CG R TLA+T+ VFSWG G G+LG G S
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 371 NSPKIIEPLS 380
N P+ IE L+
Sbjct: 3194 NIPQNIERLN 3203
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 171/368 (46%), Gaps = 46/368 (12%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ P Q L + + C S + +VY+ + +SD P ++
Sbjct: 440 IGPIQCEGLANLGVTQIACAEKRFLILSRNG-RVYTQAY----------NSDTLAPQLVQ 488
Query: 120 ALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS 177
L S + +IA H LA+ GEV SWG G+LG G T P+ + AF G
Sbjct: 489 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 548
Query: 178 ----IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMV 233
+ +A G+ +S A+ +GELY WG G YG LG G D IP VA L+ K++
Sbjct: 549 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA--GLKGLKVI 606
Query: 234 MVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGW 291
VACG T++V+ +G+++S+G YG+LG G P +E L++ + ++ G
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 666
Query: 292 RHTMAVTSDGKLYGWGWNKFGQVGVGDN--VDHCSPVQVKFP----------LDQISCGW 339
+ ++A+T DG++Y W G GDN + H + V++P + ++ G
Sbjct: 667 QFSIALTKDGQVYSW--------GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 718
Query: 340 RHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSG 399
H LA+TE V SW G+N Q H ++ P EP +L G ++I P+
Sbjct: 719 THCLALTEDSEVHSW--GSNDQCQHFDTLRVTKP---EPAALPGLDTKHIVGIACGPAQS 773
Query: 400 KTWVSPSE 407
W S SE
Sbjct: 774 FAWSSCSE 781
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 66/310 (21%)
Query: 143 GEVQSWGRNQNGQLG---------------LGT--------------------------- 160
G + WG N GQLG L T
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 161 ----------TEDSLVPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
TE P L++ + V IK VA +G +H +A++ +GE+Y WG G L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 209 GLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 268
G G+R+ P + + L+ ++V VA G H+ V+++G LY++G +YG+LGH D +
Sbjct: 4072 GHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE 4129
Query: 269 DHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-P 325
D L P +EAL+ + I+ G T+ +T D ++ WG +G++G G + D C P
Sbjct: 4130 DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVP 4188
Query: 326 VQVK----FPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSL 381
+++ + ++ CG + ++A+T+ V++WG+G +LGHG P+ ++ L
Sbjct: 4189 MKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GL 4246
Query: 382 DGSKGQNIAS 391
G K IA+
Sbjct: 4247 QGKKVIAIAT 4256
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V I GA S+AL +V +WG+G+ +LGHG P + L G +IV V GA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3266
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
H A ++S QVY+WG D G+ G+G ++ P ++ L ++ ++ACG SH +A
Sbjct: 3267 LHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 242 TISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG 301
T+S SG +Y +G + GQLG + VP EAL Q+ GG + AVT+DG
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 302 KLYGWGWNKFGQVGVGDNVDHCSPV------QVKFPLDQISCGWRHTLAVTERQNVFSWG 355
KLY G+ G++G+G +P V ++ G +H LA++ V+SWG
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4064
Query: 356 RGTNGQLGHGESSDRNSPKIIEPL 379
+G+LGHG S + P++IE L
Sbjct: 4065 EAEDGKLGHGNRSPCDRPRVIESL 4088
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ V+ I+ G+ H V V +WG ++GQLG G P ++AL G ++ V C
Sbjct: 4249 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4308
Query: 79 GADHTTAYSES 89
G+ HT A+S S
Sbjct: 4309 GSAHTLAWSTS 4319
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ ++ GA H +A+ V +WG + GQ G+G PT + L+G +I V C
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 79 GADHTTAYS 87
G+ H+ A++
Sbjct: 3317 GSSHSVAWT 3325
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 167/299 (55%), Gaps = 6/299 (2%)
Query: 13 TTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 72
T +P +L ++G HS+ LL+ + V S G GQLG A+ P + AL+
Sbjct: 17 TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLI 76
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL-FTPLPIKALHSLRVKQIAC 131
+ V+CG +H+ A +V++WG G G+LG G ++ FTP I L+ +++ Q++C
Sbjct: 77 VDLVSCGKEHSLAVCHKG-RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVA 190
G H LA++ + +V SWG+N +GQLGLG S PQ++++ EG+ + VAAG HS A
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATV-DLQREKMVMVACGWRHTISVSSSG 249
++ G +GWG G L L RN + K +V L+ +V ++CG HT ++ G
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 250 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWG 307
+++++G ++ GQLG+ + P QL + +SQI G HT+A V + G++ +G
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGP-QLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 148/273 (54%), Gaps = 21/273 (7%)
Query: 128 QIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH 187
Q A G+ H L + V S G N GQLG + +P+ +QA E + + +V+ G EH
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 188 SVAVAEDGELYGWGWGRYGNLGLGDRND-RLIPEKVATVDLQREKMVMVACGWRHTISVS 246
S+AV G ++ WG G G LG+G+ + P+K+ T L K++ V+CG H++++S
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT--LNDIKIIQVSCGHYHSLALS 144
Query: 247 SSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYG 305
+++S+G + +GQLG G +F P ++ +L ++Q++ G H+ A++ G +G
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 306 WGWNKFGQVGV-GDNVDHCSPVQVKFPLD----------QISCGWRHTLAVTERQNVFSW 354
WG N GQ+ + G NV PVQ PL ISCG HT +T+ VF++
Sbjct: 205 WGSNSAGQLALSGRNV----PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTF 260
Query: 355 GRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQ 387
G +GQLG+ + ++ P+++E +DG Q
Sbjct: 261 GDNRSGQLGYSPTPEKRGPQLVE--RIDGLVSQ 291
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 175 GVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVM 234
G + A+G HS+ + + + G G LG +PE + L+ + +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDL 79
Query: 235 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD-HLVPCQLEALRESFISQISGGWRH 293
V+CG H+++V GR++++G GQLG G+FK+ P ++ L + I Q+S G H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 294 TMAVTSDGKLYGWGWNKFGQVGVGDNV-DHCSPVQVK----FPLDQISCGWRHTLAVTER 348
++A++ D +++ WG N GQ+G+G SP +V+ PL Q++ G H+ A++
Sbjct: 140 SLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLC 199
Query: 349 QNVFSWGRGTNGQLGHGESSDRNSP-KIIEPLSLDGSKG 386
F WG + GQL S RN P + +PLS+ K
Sbjct: 200 GTSFGWGSNSAGQLA---LSGRNVPVQSNKPLSVGALKN 235
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCG 79
++ +S G HS+AL + V SWG+ GQLG G + + SP ++ +L+G + V G
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRL---GHGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
H+ A S C + WG G+L G PL + AL +L V I+CGD+H
Sbjct: 190 GAHSFALS-LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA-VAEDG 195
+T +G+V ++G N++GQLG T + PQ ++ +G+ + + G+ H++A V G
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTG 307
Query: 196 ELYGWGWG 203
++ +G G
Sbjct: 308 QVVSFGHG 315
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 183/361 (50%), Gaps = 34/361 (9%)
Query: 39 IVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G+ +R P +S + ++V G HT S+S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 156 LGL-GTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRN 214
+GL + S+VP ++Q V + VA+G +H V + DG+LY G G G LG R
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG---RV 207
Query: 215 DRLIPEKVATVDLQR---EKMVMVA--------------CGWRHTISVSSSGRLYSYGWS 257
L + L+R K VM+ CG T ++S G +Y +G S
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLS 267
Query: 258 KYGQLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVG 315
Y QLG + +P L + + S S + SGG HT+ + S+GK Y G ++G++G
Sbjct: 268 NYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 327
Query: 316 VGDNVDHCS-PVQV-KFP-LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 372
+G+ + S P + + P + ++CG AVT+ VF+WG GTN QLG G+ D S
Sbjct: 328 LGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWS 387
Query: 373 P 373
P
Sbjct: 388 P 388
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED--RLSPTQLSALDGHEIVSVTC 78
V+ AG H+V L V S+G ++G LG + + + P ++ + ++V V+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSA 126
Query: 79 GADHTTAYSESCMQVYSWG--WGDFGRLGHGNSSDLFTPL-----PIKALHSLRVKQIAC 131
G HT A ++ +V+ WG + G +G L P+ P++ + V ++A
Sbjct: 127 GDSHTAALTDDG-RVFLWGSFRDNNGVIG------LLEPMKKSMVPVQVQLDVPVVKVAS 179
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGT-----------TEDSLVPQ----KLQAFEG- 175
G+ H + +T +G++ + G + GQLG E LVP+ K + G
Sbjct: 180 GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH 239
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMV 235
V + GA + A++ +G +YG+G Y LG IP+ + + + V
Sbjct: 240 VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGF 299
Query: 236 ACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFISQISGGWRHT 294
+ G HT+ + S G+ YS G ++YG+LG G+ ++ +P + R +S ++ G
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS--RLPAVSSVACGASVG 357
Query: 295 MAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 328
AVT DG+++ WG Q+G G + D SPV++
Sbjct: 358 YAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 46/286 (16%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV+ +++G H V L + + + G GE GQLG P + G + G
Sbjct: 173 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR-------VPELFANRGGRQ------G 219
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
+ C+ + S G GH D F CG A+
Sbjct: 220 LERLLV--PKCVMLKSR-----GSRGHVRFQDAF-----------------CGAYFTFAI 255
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMV--AAGAEHSVAVAEDGEL 197
+ EG V +G + QLG TE +PQ L +F+ + V + G H+V + +G+
Sbjct: 256 SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 198 YGWGWGRYGNLGLGD-RNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
Y G YG LGLG+ ++ IP ++ + + VACG +V+ GR++++G
Sbjct: 316 YSLGRAEYGRLGLGEGAEEKSIPTLISRL----PAVSSVACGASVGYAVTKDGRVFAWGM 371
Query: 257 SKYGQLGHGDFKDHLVPCQL--EALRESFISQISGGWRHTMAVTSD 300
QLG G +D P ++ + L + +S G +HT+ + D
Sbjct: 372 GTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 6 AASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A ++ T + V ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 --SALDGHEIVSVTCGADHTT 84
L+ ++SV+ G HT
Sbjct: 392 MGKQLENRVVLSVSSGGQHTV 412
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 155/273 (56%), Gaps = 10/273 (3%)
Query: 112 LFTPLPIKALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
+FT L + S+R K G S + VT EV +G N + LG G + +LVP+K
Sbjct: 9 IFTLLSPQEAGSIR-KACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKK 67
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQ 228
L+A G IK ++ G+ H + EDG +Y WG Y LG G N + P +V T +L
Sbjct: 68 LEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLL 126
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL-EALRESFISQI 287
++++ VACG H++++++ G L+++G++ GQ+G G + P ++ L + I
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNI 186
Query: 288 SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTL 343
+ G +MAV G++YGWG+N GQ+G+G+N + +PV+V ++QI CG+ HTL
Sbjct: 187 ACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTL 246
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKII 376
A+T+ +++WG T GQLG G ++ SP I
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 14/284 (4%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+V+ +G LG G++ P ++AL ++K ++ G H L T +G V +WG
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGH 101
Query: 151 NQNGQLGLGTTEDSLVPQKLQAFEGVSIKMV---AAGAEHSVAVAEDGELYGWGWGRYGN 207
N QLG GTT + P +Q + IK V A G+ HS+A+A DGEL+ WG+ G
Sbjct: 102 NGYSQLGNGTTNQGIAP--VQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQ 159
Query: 208 LGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 267
+G G ++ P KV L +++V +ACG +++V SG +Y +G++ GQLG G+
Sbjct: 160 VGSGSTANQPTPRKVTNC-LHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN 218
Query: 268 KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQ 327
+ L P ++ AL ++QI G+ HT+A+T +G LY WG N +GQ+G G + SP Q
Sbjct: 219 GNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQ 278
Query: 328 VKFPLDQI----SCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 364
+ +++ +C HT A T+ +V+ WG RG + L H
Sbjct: 279 IMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 15 AAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIV 74
A R + A+ ++ + + V +G LG GD + L P +L AL G +I
Sbjct: 18 AGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIK 77
Query: 75 SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQ---IAC 131
S++ G+ + VY+WG + +LG+G ++ P++ +L +KQ +AC
Sbjct: 78 SLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIA--PVQVCTNLLIKQVIEVAC 135
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGAEHSVA 190
G H +A+ +GE+ +WG N GQ+G G+T + P+K+ + +A G S+A
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA 195
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGR 250
V + GE+YGWG+ G LGLG+ ++L P +VA L + + CG+ HT++++ G
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA--LHGMCVNQIVCGYAHTLALTDEGL 253
Query: 251 LYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV-TSDGKLYGWGWN 309
LY++G + YGQLG G + L P Q+ +E I + HT A T G +Y WG
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQC 313
Query: 310 KFGQVGVGDNVDH-CSPVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 368
+ GQ + ++ H C V + WR L E ++ + + E +
Sbjct: 314 R-GQSVILPHLTHFCCTDDVFACFGTPAVSWR--LLSVEHEDFLTVAESLKKEFDSPEIA 370
Query: 369 D 369
D
Sbjct: 371 D 371
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 168/300 (56%), Gaps = 15/300 (5%)
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
+ ++CG +HT A ++Y +G ++G+LG G+ + + P IKAL +VK ACG
Sbjct: 38 ICLSCGDEHT-AIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVA 192
+H L T G V + G N GQLGLG T+D ++ F +IK ++AGA S A+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 193 EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLY 252
EDG+L+ WG G +GL D+++ IP +V + + ++CG+ H+ V+ G LY
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELY 212
Query: 253 SYGWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNK 310
++G + G+LG + +H P ++ + E I Q++ G HT+ +T + +Y +G +
Sbjct: 213 TFGEPENGKLGLPNELLMNHRSPQRVLGIPERVI-QVACGGGHTVVLT-EKVVYAFGLGQ 270
Query: 311 FGQVGVGDNVDHCS-PVQVKFPLDQ----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 365
FGQ+G+G + S P ++ DQ ISCG HT +TE ++++G G +G+LG G
Sbjct: 271 FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 330
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 172/344 (50%), Gaps = 37/344 (10%)
Query: 22 LLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGAD 81
+ +S G H+ + N + +G GQLG G + PT + AL ++ CG +
Sbjct: 38 ICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRN 97
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSD--------LFTPLPIKALHSLRVKQIACGD 133
HT +++ VY+ G + G+LG G++ D FTP + +KQ++ G
Sbjct: 98 HTLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP-------ADTIKQLSAGA 149
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAE 193
+ A+T +G++ WG N GQ+GL + +P ++ G I ++ G HS V
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFVTM 207
Query: 194 DGELYGWGWGRYGNLGLGDRNDRLI----PEKVATVDLQREKMVMVACGWRHTISVSSSG 249
DGELY +G G LGL N+ L+ P++V + E+++ VACG HT+ V +
Sbjct: 208 DGELYTFGEPENGKLGLP--NELLMNHRSPQRVLGI---PERVIQVACGGGHTV-VLTEK 261
Query: 250 RLYSYGWSKYGQLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGW 308
+Y++G ++GQLG G F + P +E +++ I IS G HT +T G LY +G
Sbjct: 262 VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGD 321
Query: 309 NKFGQVGVG-DNVDH------CSPVQVKFPLDQISCGWRHTLAV 345
+ G++G+G +N + CS ++F + I+CG H L
Sbjct: 322 GRHGKLGLGMENFTNQFFPTLCSNF-LRFAVQLIACGGCHMLVF 364
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 142/258 (55%), Gaps = 16/258 (6%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ + P ++A + +K+ A G H+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
+ + G +Y G G LGLGD +DR ++ + + ++ G + +++
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFF-TPADTIKQLSAGANTSAALTED 158
Query: 249 GRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGW 308
G+L+ +G + GQ+G D + +P ++ + IS IS G+ H+ VT DG+LY +G
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKP--ISWISCGYYHSAFVTMDGELYTFGE 216
Query: 309 NKFGQVGVGDNV--DHCSPVQVK-FP--LDQISCGWRHTLAVTERQNVFSWGRGTNGQLG 363
+ G++G+ + + +H SP +V P + Q++CG HT+ +TE+ V+++G G GQLG
Sbjct: 217 PENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 275
Query: 364 HG----ESSDRNSPKIIE 377
G E+S+ PKIIE
Sbjct: 276 LGTFLFETSE---PKIIE 290
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 30/325 (9%)
Query: 5 SAASEAASTTAAPFRP--VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSP 62
S A+ T +P V L + G +H++ V + G +GQLG GD +DR +
Sbjct: 71 SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF 130
Query: 63 TQLSALD-GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 121
Q+ I ++ GA+ + A +E +++ WG G++G + S++ P
Sbjct: 131 HQIVFFTPADTIKQLSAGANTSAALTEDG-KLFMWGDNSEGQIGLEDKSNVCIP------ 183
Query: 122 HSLRVKQ----IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT--EDSLVPQKLQAFEG 175
H + V + I+CG H VT++GE+ ++G +NG+LGL + PQ++
Sbjct: 184 HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 243
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG----DRNDRLIPEKVATVDLQREK 231
I+ VA G H+V + E +Y +G G++G LGLG + ++ I E++ + +K
Sbjct: 244 RVIQ-VACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERI-----KDQK 296
Query: 232 MVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESFISQISG 289
+ ++CG HT ++ G LY++G ++G+LG G +F + P + I+
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIAC 356
Query: 290 GWRHTMAVTSDGKLYGWGWNKFGQV 314
G H M V + +L KF V
Sbjct: 357 GGCH-MLVFATPRLGTIDEPKFEDV 380
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS 244
AE V + G ++ +G ++ IP K + + + ++CG HT
Sbjct: 2 AESESLVPDTGAVFTFGKTKFA---------ENIPSKFW---FKNDIPICLSCGDEHTAI 49
Query: 245 VSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLY 304
V+ + +LY +G + +GQLG G + P ++AL+ + + G HT+ T G +Y
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVY 109
Query: 305 GWGWNKFGQVGVGDNVDHCSPVQVKF--PLD---QISCGWRHTLAVTERQNVFSWGRGTN 359
G N GQ+G+GD D + Q+ F P D Q+S G + A+TE +F WG +
Sbjct: 110 AAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE 169
Query: 360 GQLGHGESSD 369
GQ+G + S+
Sbjct: 170 GQIGLEDKSN 179
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 155/272 (56%), Gaps = 8/272 (2%)
Query: 112 LFTPLPIKALHSLRVKQI-ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL 170
+FT L + + S+R + S L VT EV +G N + LG G + +LVP+KL
Sbjct: 9 IFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL 68
Query: 171 QAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQR 229
+ G IK ++ G+ H + EDG +Y WG Y LG G N + P +V T +L
Sbjct: 69 EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLI 127
Query: 230 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL-EALRESFISQIS 288
+++V VACG H++++++ G ++++G++ GQ+G G + P ++ L + I+
Sbjct: 128 KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIA 187
Query: 289 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV----KFPLDQISCGWRHTLA 344
G +MAV +G++YGWG+N GQ+G+G+N + +PV+V ++QI CG+ HTLA
Sbjct: 188 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLA 247
Query: 345 VTERQNVFSWGRGTNGQLGHGESSDRNSPKII 376
+T+ +++WG T GQLG G ++ SP I
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 17/362 (4%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS 75
A R + AS ++ + + V +G LG GD + L P +L L G +I S
Sbjct: 19 ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKS 78
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQ---IACG 132
++ G+ S VY+WG + +LG+G ++ P++ +L +KQ +ACG
Sbjct: 79 LSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIA--PVQVCTNLLIKQVVEVACG 136
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMV---AAGAEHSV 189
H +A+ +GEV +WG N GQ+G G+T + P+K+ + IK V A G S+
Sbjct: 137 SHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACGQTSSM 194
Query: 190 AVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSG 249
AV ++GE+YGWG+ G LGLG+ ++L P +VA L + + CG+ HT++++ G
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA--LHSVCVNQIVCGYAHTLALTDEG 252
Query: 250 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV-TSDGKLYGWGW 308
LY++G + YGQLG G+ + L P + +E + + HT A T G +Y WG
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Query: 309 NKFGQVGVGDNVDHCSPVQVKFP-LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGES 367
+ GQ + ++ H S F + WR L E ++ + + E+
Sbjct: 313 CR-GQSVILPHLTHFSCTDDVFACFATPAVSWR--LLSVEHEDFLTVAESLKKEFDSPET 369
Query: 368 SD 369
+D
Sbjct: 370 AD 371
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 165/316 (52%), Gaps = 19/316 (6%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCM-----QVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ L EI S+ T+ SE+ +V+ +G LG G++ P ++
Sbjct: 10 FTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE 69
Query: 120 ALHSLRVKQIACGD-SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSI 178
L ++K ++ G H L T +G V +WG N QLG GTT + P +Q + I
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLI 127
Query: 179 KMV---AAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMV 235
K V A G+ HS+A+A DGE++ WG+ G +G G ++ P KV L +++V +
Sbjct: 128 KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNC-LHIKRVVGI 186
Query: 236 ACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTM 295
ACG +++V +G +Y +G++ GQLG G+ + L P ++ AL ++QI G+ HT+
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTL 246
Query: 296 AVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQI----SCGWRHTLAV-TERQN 350
A+T +G LY WG N +GQ+G G+ + SP + +++ +C HT A T+ +
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGH 306
Query: 351 VFSWG--RGTNGQLGH 364
V+ WG RG + L H
Sbjct: 307 VYMWGQCRGQSVILPH 322
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 13 TTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 72
T + V+ I+ G + S+A+L V WG +GQLG G+ ++L+P +++AL
Sbjct: 175 TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC 234
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG 132
+ + CG HT A ++ + +Y+WG +G+LG GN ++L +P I V+ AC
Sbjct: 235 VNQIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACH 293
Query: 133 DSHCLAVTVE-GEVQSWGR 150
+H A + G V WG+
Sbjct: 294 SAHTSAAKTQGGHVYMWGQ 312
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 183/358 (51%), Gaps = 28/358 (7%)
Query: 39 IVCSWGRGEDGQLGHGDAE-DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G++ +R P + L ++V G HT ++S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGESVLERKKPALVPLL--QDVVQAEAGGMHTVCLNQSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 156 LGL-GTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG----- 209
+GL + S+VP ++Q + + VA+G +H V + DG+LY G G G LG
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPEL 210
Query: 210 LGDRN-----DRLIPEKVATVDLQ----REKMVMVACGWRHTISVSSSGRLYSYGWSKYG 260
+R +RL+ K + + R + CG T ++S G +Y +G S Y
Sbjct: 211 FANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYH 270
Query: 261 QLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 318
QLG +P L + + S S + SGG HT+ + S+GK Y G ++G++G+G+
Sbjct: 271 QLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGE 330
Query: 319 NVDHCS-PVQV-KFPL-DQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 373
+ S P + + P+ ++CG AV++ VF+WG GTN QLG G+ D SP
Sbjct: 331 GAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP 388
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 37/337 (10%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED--RLSPTQLSALDGHEIVS 75
+ V+ AG H+V L V S+G ++G LG + + + P ++ + ++V
Sbjct: 66 LQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQ 123
Query: 76 VTCGADHTTAYSESCMQVYSWG--WGDFGRLGHGNSSDLFTPL-----PIKALHSLRVKQ 128
V+ G HT A +E +V+ WG + G +G L P+ P++ + V +
Sbjct: 124 VSAGDSHTAALTEDG-RVFLWGSFRDNNGVIG------LLEPMKKSMVPVQVQLDMPVVK 176
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-----------TEDSLVPQ----KLQAF 173
+A G+ H + +T +G++ + G + GQLG E LVP+ K +
Sbjct: 177 VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGS 236
Query: 174 EG-VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKM 232
G V + GA + A++ +G +YG+G Y LG IP+ + + +
Sbjct: 237 RGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSW 296
Query: 233 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFISQISGGW 291
V + G HTI + S G+ YS G ++YG+LG G+ ++ +P + R +S ++ G
Sbjct: 297 VGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS--RLPVVSSVACGA 354
Query: 292 RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 328
AV+ DG+++ WG Q+G G + D SPV++
Sbjct: 355 SVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 22/243 (9%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------GDAEDRLSPTQLSALD 69
PV+ +++G H V L + + + G GE GQLG +RL + L
Sbjct: 173 PVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLK 232
Query: 70 GH------EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
CGA T A S VY +G ++ +LG ++ F P + + +
Sbjct: 233 SRGSRGRVRFQDAFCGAYLTFAISREG-HVYGFGLSNYHQLGTPGTASCFIPQNLTSFKN 291
Query: 124 LRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKM 180
+ G H + + EG+ S GR + G+LGLG E+ +P + VS
Sbjct: 292 STKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVS--S 349
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWR 240
VA GA AV++DG ++ WG G LG G D P ++ L+ ++ V+ G +
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQ 409
Query: 241 HTI 243
HT+
Sbjct: 410 HTV 412
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 7 ASEAASTTAAPFRPVLL-ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T PV+ ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 SA--LDGHEIVSVTCGADHTT 84
+ L+ +++V+ G HT
Sbjct: 392 TGKQLENRVVLTVSSGGQHTV 412
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 180/358 (50%), Gaps = 28/358 (7%)
Query: 39 IVCSWGRGEDGQLGHGDAE-DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G++ +R P + L ++V G HT S+S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGESVLERKKPALVPLL--QDVVQAEAGGMHTVCLSQSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 156 LGL-GTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG----- 209
+GL + S+VP ++Q + VA+G +H V + DG+LY G G G LG
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPEL 210
Query: 210 LGDRNDR------LIPEKVATVDLQ---REKMVMVACGWRHTISVSSSGRLYSYGWSKYG 260
+R R L+P V R + CG T ++S G +Y +G S Y
Sbjct: 211 FANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYH 270
Query: 261 QLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 318
QLG +P L + + S S + SGG HT+ + S+GK Y G ++G++G+G+
Sbjct: 271 QLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE 330
Query: 319 NVDHCS-PVQV-KFPL-DQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 373
+ S P + + P+ ++CG AV++ VF+WG GTN QLG G+ D SP
Sbjct: 331 GAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP 388
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 49/367 (13%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED--RLSPTQLSALDGHEIVS 75
+ V+ AG H+V L V S+G ++G LG + + + P ++ + ++V
Sbjct: 66 LQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQ 123
Query: 76 VTCGADHTTAYSESCMQVYSWG--WGDFGRLGHGNSSDLFTPL-----PIKALHSLRVKQ 128
V+ G HT A +E +V+ WG + G +G L P+ P++ V +
Sbjct: 124 VSAGDSHTAALTEDG-RVFLWGSFRDNNGVIG------LLEPMKKSMVPVQVQLDAPVVK 176
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLG--------------LGTTEDSLVPQ----KL 170
+A G+ H + +T +G++ + G + GQLG LG LVP+ K
Sbjct: 177 VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRL---LVPRCVLLKS 233
Query: 171 QAFEG-VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQR 229
+ G V + GA + A++ +G +YG+G Y LG IP+ + +
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 230 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFISQIS 288
+ V + G HT+ + S G+ YS G ++YG+LG G+ ++ +P + R +S ++
Sbjct: 294 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS--RLPVVSSVA 351
Query: 289 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV------KFPLDQISCGWRHT 342
G AV+ DG+++ WG Q+G G + D SPV++ + +S G +HT
Sbjct: 352 CGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHT 411
Query: 343 LAVTERQ 349
+ + + Q
Sbjct: 412 VLLVKDQ 418
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 7 ASEAASTTAAPFRPVLL-ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T PV+ ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 SA--LDGHEIVSVTCGADHTT 84
+ L+ +++V+ G HT
Sbjct: 392 TGKQLENRVVLTVSSGGQHTV 412
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
+L ++G HS+ L S + V S G GQLG + P + AL+ + V+CG
Sbjct: 24 LLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGK 83
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL-FTPLPIKALHSLRVKQIACGDSHCLAV 139
+H+ A +V++WG G G+LG G ++ F P IKAL +++ Q++CG H LA+
Sbjct: 84 EHSVAVCHKG-KVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDS-LVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+ +G V SWGRN GQLGLG S +PQK+++ EG+ + VAAG HS A++ G +
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202
Query: 199 GWGWGRYGNLGL-GDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWS 257
GWG R G L L G++ I + + L+ ++ ++CG+ HT ++ G+++++G +
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 262
Query: 258 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWG 307
GQL P +E + +SQI HT+A V + G++ G
Sbjct: 263 SSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLG 312
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 165/324 (50%), Gaps = 17/324 (5%)
Query: 62 PTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA 120
P +L A G E++ G H+ S +VYS G +G+LG P PI+A
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLF-SNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIK 179
L+ L V ++CG H +AV +G+V +WG GQLG+G E S +P K++A G+ I
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR--LIPEKVATVDLQREKMVMVAC 237
V+ G HS+A++EDG ++ WG G LGLG +N R IP+KV + L+ + VA
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKVKS--LEGIPLAQVAA 187
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGH--GDFKDHLV-PCQLEALRESFISQISGGWRHT 294
G H+ ++S +G + +G ++ GQL K+ + P + AL+ + IS G+ HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 295 MAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK---FPLDQISCGWRHTLA-VTERQN 350
+T +G+++ +G N GQ+ P ++ + QI C HT+A V
Sbjct: 248 AVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQ 307
Query: 351 VFSWGRGTN--GQLGHGESSDRNS 372
V S GRG + H E+ NS
Sbjct: 308 VVSLGRGPSHTSNPTHQEAPAENS 331
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
+ + Q A G+ H L + V S G N GQLG + + P+ +QA + + +V+
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRND-RLIPEKVATVDLQREKMVMVACGWRHT 242
G EHSVAV G+++ WG G G LG+G+ + +P K+ L K++ V+CG H+
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA--LAGIKIIQVSCGHYHS 139
Query: 243 ISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG 301
+++S G ++S+G + GQLG G + + +P ++++L ++Q++ G H+ A++ G
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTG 199
Query: 302 KLYGWGWNKFGQVGV-GDNVD------HCSPVQVKFPLDQISCGWRHTLAVTERQNVFSW 354
+GWG N+ GQ+ + G+ V H + ISCG+ HT +TE VF++
Sbjct: 200 TSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTF 259
Query: 355 GRGTNGQLGHGESSDRNSPKIIE 377
G ++GQL S + P++IE
Sbjct: 260 GGNSSGQLQPSPRSGQRGPQLIE 282
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQL---GHGDAEDRLSPTQLSALDGHEIVSV 76
P+ ++AG +HS AL WG GQL G+ E P + AL ++ +
Sbjct: 181 PLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI 240
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
+CG +HT +E QV+++G G+L S P I+ + RV QI C H
Sbjct: 241 SCGYEHTAVLTEEG-QVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHT 298
Query: 137 LA-VTVEGEVQSWGR 150
+A V G+V S GR
Sbjct: 299 IAYVYTTGQVVSLGR 313
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 151/285 (52%), Gaps = 16/285 (5%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC----GDSHCLAVTVEGEVQS 147
+++ G G LG G+ P + L SL K+IAC H + T EGEV +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEP---RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 148 WGRNQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
WG N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 207 NLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD 266
+G G ++ IP +V T LQ + +V +ACG ++V +G +Y +G++ GQLG G+
Sbjct: 183 QVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 267 FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 326
+ PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301
Query: 327 QVKFPLDQI----SCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 364
V D+I +C HT A T+ +V+ WG RG + L H
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 160/288 (55%), Gaps = 17/288 (5%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N G LGLG + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQ 228
L + G I ++ G+ H V +GE++ WG Y LG G N L+P ++T +L
Sbjct: 92 LDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLS 150
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQI 287
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 288 SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTL 343
+ G MAV G++Y WG+N GQ+G+G++ + +P +V + +++CG+ HTL
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
+T+ V++WG + GQLG G S+++ P P++++ + IA+
Sbjct: 271 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPT---PVTVEKDRIIEIAA 315
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 154/279 (55%), Gaps = 6/279 (2%)
Query: 49 GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN 108
G LG GD + + P +L +L+G +I ++ G+ + + +V++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 109 SSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T + +P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 168 QKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD 226
+++ + + +A G +AV + GE+Y WG+ G LGLG+ ++ P +VA
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA-- 253
Query: 227 LQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQ 286
LQ ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++ I
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEI 313
Query: 287 ISGGWRHTMAV-TSDGKLYGWGWNKFGQVGVGDNVDHCS 324
+ HT A T G +Y WG + GQ + ++ H S
Sbjct: 314 AACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 351
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 133/247 (53%), Gaps = 19/247 (7%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGW 98
V +WG QLG+G L P +S L +++ V CG+ H+ + +V++WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-GEVFAWGY 178
Query: 99 GDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
+ G++G G++ + P+P + L + V IACG C+AV GEV WG N NGQ
Sbjct: 179 NNSGQVGSGSTVN--QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LGLG + + P ++ A +G+ ++ VA G H++ + ++G++Y WG YG LG G++++
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 216 RLIPEKVATVDLQREKMV-MVACGWRHTISVSSS-GRLYSYGWSKYGQ------LGHGDF 267
+ P V +++++++ + AC HT + + G +Y +G + GQ L H
Sbjct: 297 QSYPTPVT---VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFSC 352
Query: 268 KDHLVPC 274
D + C
Sbjct: 353 TDDVFAC 359
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 151/285 (52%), Gaps = 16/285 (5%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC----GDSHCLAVTVEGEVQS 147
+++ G G LG G+ P + L SL K+IAC H + T EGEV +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEP---RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 148 WGRNQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
WG N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 207 NLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD 266
+G G ++ IP +V T LQ + +V +ACG ++V +G +Y +G++ GQLG G+
Sbjct: 183 QVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 267 FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 326
+ PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301
Query: 327 QVKFPLDQI----SCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 364
V D+I +C HT A T+ +V+ WG RG + L H
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 160/288 (55%), Gaps = 17/288 (5%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N G LGLG + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQ 228
L + G I ++ G+ H V +GE++ WG Y LG G N L+P ++T +L
Sbjct: 92 LDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLS 150
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQI 287
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 288 SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTL 343
+ G MAV G++Y WG+N GQ+G+G++ + +P +V + +++CG+ HTL
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
+T+ V++WG + GQLG G S+++ P P++++ + IA+
Sbjct: 271 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPT---PVTVEKDRIIEIAA 315
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 154/279 (55%), Gaps = 6/279 (2%)
Query: 49 GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN 108
G LG GD + + P +L +L+G +I ++ G+ + + +V++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 109 SSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T + +P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 168 QKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD 226
+++ + + +A G +AV + GE+Y WG+ G LGLG+ ++ P +VA
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA-- 253
Query: 227 LQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQ 286
LQ ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++ I
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEI 313
Query: 287 ISGGWRHTMAV-TSDGKLYGWGWNKFGQVGVGDNVDHCS 324
+ HT A T G +Y WG + GQ + ++ H S
Sbjct: 314 AACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 351
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 133/247 (53%), Gaps = 19/247 (7%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGW 98
V +WG QLG+G L P +S L +++ V CG+ H+ + +V++WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-GEVFAWGY 178
Query: 99 GDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
+ G++G G++ + P+P + L + V IACG C+AV GEV WG N NGQ
Sbjct: 179 NNSGQVGSGSTVN--QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LGLG + + P ++ A +G+ ++ VA G H++ + ++G++Y WG YG LG G++++
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 216 RLIPEKVATVDLQREKMV-MVACGWRHTISVSSS-GRLYSYGWSKYGQ------LGHGDF 267
+ P V +++++++ + AC HT + + G +Y +G + GQ L H
Sbjct: 297 QSYPTPVT---VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFSC 352
Query: 268 KDHLVPC 274
D + C
Sbjct: 353 TDDVFAC 359
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 191/394 (48%), Gaps = 36/394 (9%)
Query: 6 AASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQ 64
AA E+ T+ L I SH G V + G+G+ GQLG G D +R P
Sbjct: 12 AAEESNGTSDVKKTKALPIVTHPSHGTV---GGQVLTLGQGDVGQLGLGEDIMERKKPAL 68
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
++ + +IV G HT S +Y++G D G LG S + P K +
Sbjct: 69 VTLTE--DIVQAAAGGMHTVCLGASG-SIYTFGCNDEGALGRDTSEEGSEMQPGKVELAE 125
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQLGL-GTTEDSLVPQKLQAFEGVSIKMV 181
+V Q++ GDSH A+T +G V +G R+ NG +GL + S+VP ++Q + +
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI--NTPVIKI 183
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLG-----LGDRNDR------LIPEKVATVDLQ-- 228
A+G +H V + DG+LY G G G LG +R R L+P+ + L+
Sbjct: 184 ASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQ---CIHLKAK 240
Query: 229 ---REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFIS 285
R V CG T +VS G +Y +G S Y QLG + + P L + + S S
Sbjct: 241 GSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKS 300
Query: 286 QI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS---PVQVKFPLDQISCGWR 340
I SGG HT+ V S+GK Y G ++G++G+G+N + S P+ ++ ++ G
Sbjct: 301 WIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINSVASGAS 360
Query: 341 HTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPK 374
+ AV+ VF+WG GTN QLG GE D SP+
Sbjct: 361 VSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 394
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 177/361 (49%), Gaps = 42/361 (11%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED--RLSPTQLSALDGHEIVSVTC 78
++ +AG H+V L + + ++G ++G LG +E+ + P ++ + ++V V+
Sbjct: 75 IVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAE--KVVQVSA 132
Query: 79 GADHTTAYSESCMQVYSWG--WGDFGRLGHGNSSDLFTPL-----PIKALHSLRVKQIAC 131
G HT A +E +V+ +G + G +G L P+ P++ + V +IA
Sbjct: 133 GDSHTAALTEDG-RVFVFGSFRDNNGVIG------LLEPMKKSMVPVQVQINTPVIKIAS 185
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGL-----------GTTEDSLVPQ----KLQAFEGV 176
G+ H + +TV+G++ + G + GQLG E LVPQ K + V
Sbjct: 186 GNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRV 245
Query: 177 SIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVA 236
+ V GA + AV+++G +YG+G Y LG + P+ + + + + +
Sbjct: 246 HFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFS 305
Query: 237 CGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFISQISGGWRHTM 295
G HT+ V S G+ YS G ++YG+LG G+ ++ P + L + I+ ++ G +
Sbjct: 306 GGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPK--INSVASGASVSY 363
Query: 296 AVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV--KFPLDQ----ISCGWRHTLAVTERQ 349
AV++DG ++ WG Q+G G+ D SP Q+ K D+ +S G +HT+ + ++
Sbjct: 364 AVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKR 423
Query: 350 N 350
+
Sbjct: 424 S 424
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 7 ASEAASTTAAPFRPVL-LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T P P + +++GAS S A+ + V +WG G + QLG G+ ED SP Q+
Sbjct: 337 AEEQSEPTPIPDLPKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQM 396
Query: 66 SA--LDGHEIVSVTCGADHT 83
+ L+ E++SV+ G HT
Sbjct: 397 TGKHLEDREVLSVSSGGQHT 416
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 164/300 (54%), Gaps = 15/300 (5%)
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
V ++CG +H+ + ++Y +G ++G+LG G+ S + P +KAL +VK ACG
Sbjct: 38 VHLSCGDEHSAVVT-GNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVA 192
+H L T G V + G N GQLGLG TE+ + F IK ++AG+ S A+
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 193 EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLY 252
EDG L+ WG G +GL + ++ +P++V + + ++CG+ H+ V++ G LY
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 253 SYGWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNK 310
+G + G+LG + +H P + + E I Q++ G HT+ +T + +Y +G +
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 311 FGQVGVGDNVDHCS-PVQVKFPLDQ----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 365
FGQ+G+G + S P ++ DQ ISCG HT +T+ ++++G G +G+LG G
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 172/336 (51%), Gaps = 20/336 (5%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV L S G HS + N + +G GQLG G PT + AL ++ CG
Sbjct: 37 PVHL-SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACG 95
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL-RVKQIACGDSHCLA 138
+HT +E VY+ G + G+LG G++ + T I S ++KQ++ G + A
Sbjct: 96 RNHTLVSTEGG-NVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G + WG N GQ+GL + VPQ++ G + ++ G HS V DGELY
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELY 212
Query: 199 GWGWGRYGNLGLGDR---NDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYG 255
+G G LGL ++ N R P+ V+ + EK++ VACG HT+ ++ + +Y++G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHR-TPQLVSEI---PEKVIQVACGGEHTVVLTENA-VYTFG 267
Query: 256 WSKYGQLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV 314
++GQLG G F + P +E +R+ IS IS G HT +T G +Y +G + G++
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKL 327
Query: 315 GVG--DNVDHCSPVQ----VKFPLDQISCGWRHTLA 344
G+G + +H P ++F + ++CG H +
Sbjct: 328 GLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVV 363
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 140/260 (53%), Gaps = 16/260 (6%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ P ++A + +K+ A G H+
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
+ E G +Y G G LGLGD +R V + K+ ++ G + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFH-VISFFTSEHKIKQLSAGSNTSAALTED 158
Query: 249 GRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGW 308
GRL+ +G + GQ+G + + VP Q+ + +S IS G+ H+ VT+DG+LY +G
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP--VSWISCGYYHSAFVTTDGELYVFGE 216
Query: 309 NKFGQVGVGDNV--DHCSP---VQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLG 363
+ G++G+ + + +H +P ++ + Q++CG HT+ +TE V+++G G GQLG
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLG 275
Query: 364 HG----ESSDRNSPKIIEPL 379
G E+S+ PK+IE +
Sbjct: 276 LGTFLFETSE---PKVIENI 292
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 11/274 (4%)
Query: 5 SAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQ 64
SA S+ A V L + G +H++ G V + G +GQLG GD E+R +
Sbjct: 73 SAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHV 132
Query: 65 LSALDG-HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
+S H+I ++ G++ + A +E +++ WG G++G N S++ P +
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDG-RLFMWGDNSEGQIGLKNVSNVCVPQQVTI--G 189
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE--DSLVPQKLQAFEGVSIKMV 181
V I+CG H VT +GE+ +G +NG+LGL + PQ + I+ V
Sbjct: 190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-V 248
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRH 241
A G EH+V + E+ +Y +G G++G LGLG KV +++ + + ++CG H
Sbjct: 249 ACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIE-NIRDQTISYISCGENH 306
Query: 242 TISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVP 273
T ++ G +Y++G ++G+LG G +F +H +P
Sbjct: 307 TALITDIGLMYTFGDGRHGKLGLGLENFTNHFIP 340
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAE--DRLSPTQLSALDGHEIVSV 76
+PV IS G HS + + + +G E+G+LG + + +P +S + +++ V
Sbjct: 190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEI-PEKVIQV 248
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR---VKQIACGD 133
CG +HT +E+ VY++G G FG+LG G + LF K + ++R + I+CG+
Sbjct: 249 ACGGEHTVVLTENA--VYTFGLGQFGQLGLG--TFLFETSEPKVIENIRDQTISYISCGE 304
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTE--DSLVPQKLQAFEGVSIKMVAAGAEHSVAV 191
+H +T G + ++G ++G+LGLG + +P F +K+VA G H V
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Query: 192 A 192
A
Sbjct: 365 A 365
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 168/304 (55%), Gaps = 15/304 (4%)
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSH 135
++CG +HT + + ++Y +G ++G+LG G+ S + P +KAL +VK ACG +H
Sbjct: 40 LSCGDEHTAVVTGN-NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVAED 194
L T G+V + G N GQLGLG TE+ + F IK ++AG+ S A+ ED
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 195 GELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSY 254
GEL+ WG G +GL + + +P++V + + ++CG+ H+ V++ G+LY++
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTF 214
Query: 255 GWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 312
G + G+LG + +H +P + + + Q++ G HT+ +T +Y +G +FG
Sbjct: 215 GEPECGKLGLPNQLLVNHRMPQPVPGIPGKVV-QVACGGGHTVVLTEKA-VYTFGLGQFG 272
Query: 313 QVGVGDNVDHCS-PVQVKFPLDQ----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGES 367
Q+G+G + S P ++ DQ I+CG HT +T+ ++++G G +G+LG G
Sbjct: 273 QLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLE 332
Query: 368 SDRN 371
+ N
Sbjct: 333 NSTN 336
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 172/334 (51%), Gaps = 19/334 (5%)
Query: 23 LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADH 82
+S G H+ + N + +G GQLG G PT + AL ++ CG +H
Sbjct: 39 FLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTV 141
T +E +VY+ G + G+LG G++ + T I S R +KQ++ G + A+T
Sbjct: 99 TLVSTEGG-KVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+GE+ WG N GQ+GL + VPQ++ G I ++ G HS V +G+LY +G
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFG 215
Query: 202 WGRYGNLGLGDR---NDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSK 258
G LGL ++ N R+ P+ V + K+V VACG HT+ ++ +Y++G +
Sbjct: 216 EPECGKLGLPNQLLVNHRM-PQPVPGIP---GKVVQVACGGGHTVVLTEKA-VYTFGLGQ 270
Query: 259 YGQLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG 317
+GQLG G F + VP +E +++ IS I+ G HT +T G +Y +G + G++G+G
Sbjct: 271 FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Query: 318 --DNVDHCSPVQ----VKFPLDQISCGWRHTLAV 345
++ + P ++F + +SCG HTL
Sbjct: 331 LENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 10/255 (3%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ P ++A + +K A G H+
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
+ E G++Y G G LGLGD +R ++ QR K+ ++ G + +++
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158
Query: 249 GRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGW 308
G L+ +G + GQ+G + + VP Q+ + IS IS G+ H+ VT++G+LY +G
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTVGKP--ISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 309 NKFGQVGVGDN--VDHCSPVQVK-FP--LDQISCGWRHTLAVTERQNVFSWGRGTNGQLG 363
+ G++G+ + V+H P V P + Q++CG HT+ +TE+ V+++G G GQLG
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLG 275
Query: 364 HGESSDRNS-PKIIE 377
G S PK IE
Sbjct: 276 LGTFLFETSVPKAIE 290
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 5 SAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQ 64
S S+ A V + G +H++ G V + G +GQLG GD E+R +
Sbjct: 73 STVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132
Query: 65 LSALDGH-EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
+S +I ++ G++ + A +E +++ WG G++G N +++ P +
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDG-ELFMWGDNSEGQIGLENVTNVCVPQQVTV--G 189
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT--EDSLVPQKLQAFEGVSIKMV 181
+ I+CG H VT EG++ ++G + G+LGL + +PQ + G ++ V
Sbjct: 190 KPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-V 248
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATVDLQREKMVMVACGWR 240
A G H+V + E +Y +G G++G LGLG + +P+ + + Q K+ +ACG
Sbjct: 249 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ--KISFIACGEN 305
Query: 241 HTISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESFISQISGGWRHTMAVT 298
HT ++ G +Y++G ++G+LG G + + +P + +S G HT+
Sbjct: 306 HTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Query: 299 S 299
+
Sbjct: 366 T 366
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 150/282 (53%), Gaps = 10/282 (3%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+++ G G LG G+ P + +L ++ ++ G H + T +GEV +WG
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGH 125
Query: 151 NQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG 209
N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 210 LGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD 269
G ++ IP +V T LQ + ++ +ACG +++V +G +Y +G++ GQLG G +
Sbjct: 186 SGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN 244
Query: 270 HLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK 329
PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P V
Sbjct: 245 QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV 304
Query: 330 FPLDQI----SCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 364
D+I +C HT A T+ +V+ WG RG + L H
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 44 GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGR 103
G G LG GD + + P +L +L G +I S++ G+ + + +V++WG + +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 104 LGHGNSSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE 162
LG+G ++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 163 DSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEK 221
+ +P+++ + + +A G S+AV + GE+Y WG+ G LGLG ++ P +
Sbjct: 191 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 222 VATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRE 281
VA LQ ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308
Query: 282 SFISQISGGWRHTMAV-TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISCGWR 340
I + HT A T G +Y WG + V + + C V + WR
Sbjct: 309 RIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWR 368
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 160/288 (55%), Gaps = 17/288 (5%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N +G LG+G + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQ 228
L + G I ++ G+ H V DGE++ WG Y LG G N L+P ++T +L
Sbjct: 92 LDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLS 150
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQI 287
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 288 SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTL 343
+ G +MAV G++Y WG+N GQ+G+G + + +P +V + +++CG+ HTL
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
+T+ +++WG + GQLG G S+++ P P+ ++ + IA+
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPT---PVVVEKDRIIEIAA 315
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 130/235 (55%), Gaps = 12/235 (5%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSE 88
H V + V +WG QLG+G L P +S L +++ V CG+ H+ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 89 SCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEV 145
+V++WG+ + G++G G++++ P+P + L + V IACG +AV GEV
Sbjct: 170 D-GEVFAWGYNNSGQVGSGSTAN--QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 146 QSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
WG N NGQLGLG++ + P ++ A +G+ ++ VA G H++ + ++G++Y WG Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 206 GNLGLGDRNDRLIPEKVATVDLQREKMV-MVACGWRHTISVSSS-GRLYSYGWSK 258
G LG G+++++ P V +++++++ + AC HT + + G +Y +G +
Sbjct: 287 GQLGTGNKSNQSYPTPVV---VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR 338
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVT 77
+ V+ ++ G+ HS+ L S V +WG GQ+G G ++ P +++ L ++++
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIA 211
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
CG + A ++ +VY WG+ G+LG G+S + TP + AL +RV+++ACG +H L
Sbjct: 212 CGQMCSMAVVDT-GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH-SVAVAEDGE 196
+T EG++ +WG N GQLG G + P + + I++ A + H S A + G
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGH 330
Query: 197 LYGWGWGR 204
+Y WG R
Sbjct: 331 VYMWGQCR 338
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 5/267 (1%)
Query: 44 GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGR 103
G G LG GD + + P +L +L G +I S++ G+ + + +V++WG + +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 104 LGHGNSSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE 162
LG+G ++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 163 DSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEK 221
+ +P+++ + + +A G S+AV + GE+Y WG+ G LGLG ++ P +
Sbjct: 191 NQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 222 VATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRE 281
VA LQ ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308
Query: 282 SFISQISGGWRHTMAVTSD-GKLYGWG 307
I + HT A S G +Y WG
Sbjct: 309 RIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 160/288 (55%), Gaps = 17/288 (5%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N +G LG+G + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQ 228
L + G I ++ G+ H V DGE++ WG Y LG G N L+P ++T +L
Sbjct: 92 LDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLS 150
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQI 287
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSI 210
Query: 288 SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTL 343
+ G +MAV G++Y WG+N GQ+G+G + + +P +V + +++CG+ HTL
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
+T+ +++WG + GQLG G S+++ P P+ ++ + IA+
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPT---PVVVEKDRIIEIAA 315
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 149/282 (52%), Gaps = 10/282 (3%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+++ G G LG G+ P + +L ++ ++ G H + T +GEV +WG
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGH 125
Query: 151 NQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG 209
N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 210 LGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD 269
G ++ IP +V T LQ + ++ +ACG +++V +G +Y +G++ GQLG G +
Sbjct: 186 SGSTANQPIPRRV-TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN 244
Query: 270 HLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK 329
PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P V
Sbjct: 245 QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV 304
Query: 330 FPLDQI----SCGWRHTLAVTER-QNVFSWG--RGTNGQLGH 364
D+I +C HT A + +V+ WG RG + L H
Sbjct: 305 VEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVILPH 346
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 130/235 (55%), Gaps = 12/235 (5%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSE 88
H V + V +WG QLG+G L P +S L +++ V CG+ H+ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 89 SCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEV 145
+V++WG+ + G++G G++++ P+P + L + V IACG +AV GEV
Sbjct: 170 D-GEVFAWGYNNSGQVGSGSTAN--QPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEV 226
Query: 146 QSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
WG N NGQLGLG++ + P ++ A +G+ ++ VA G H++ + ++G++Y WG Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 206 GNLGLGDRNDRLIPEKVATVDLQREKMV-MVACGWRHTISVSSS-GRLYSYGWSK 258
G LG G+++++ P V +++++++ + AC HT + S G +Y +G +
Sbjct: 287 GQLGTGNKSNQSYPTPVV---VEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCR 338
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVT 77
+ V+ ++ G+ HS+ L S V +WG GQ+G G ++ P +++ L ++S+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIA 211
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
CG + A ++ +VY WG+ G+LG G+S + TP + AL +RV+++ACG +H L
Sbjct: 212 CGQMCSMAVVDT-GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH-SVAVAEDGE 196
+T EG++ +WG N GQLG G + P + + I++ A + H S A ++ G
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGH 330
Query: 197 LYGWGWGR 204
+Y WG R
Sbjct: 331 VYMWGQCR 338
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 172/359 (47%), Gaps = 46/359 (12%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
LS + +VS +C A +E +++SWG + G+LGHG++ + P I+AL
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEG--KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE 200
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ ACG +H LA+T G V ++G N+ GQLGLG D++ + G I +A G
Sbjct: 201 AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 260
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGD------RNDR------LIPEKVAT-VDLQREK 231
AE S+ + G LY +G YG LG R R L+P +VA ++ ++
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 232 MVM---------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQLEALR 280
++ VACG HT+ + S R++S+G+ YG+LGH + KD +VP +L
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 380
Query: 281 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISCGWR 340
+QI G+ + AV+ G L+ WG N S + K D CGWR
Sbjct: 381 GRGATQIYAGYTCSFAVSEVGGLFFWG---------ATNTSRESTMYPKAVQDL--CGWR 429
Query: 341 --------HTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 390
++ V ++ SWG T G+LG+G+ ++S E +LDG + +A
Sbjct: 430 IRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 167/350 (47%), Gaps = 41/350 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR E GQLGHGD + +P + AL IV CG +HT A +
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
++ V+++G G+LG GN +D P P + +++ + + ++ACG + + +G +
Sbjct: 217 DT-GSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + LVP+++ F V ++ VA
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHT 242
GA H++ + ++ WG+G YG LG ++ D ++P V D + G+ +
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCS 394
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 302
+VS G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 395 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADES 447
Query: 303 LYGWGWNK-FGQVGVGDNVDHCSPVQVKFPL------DQISCGWRHTLAV 345
WG + FG++G GD+ S + +Q++ G+ H+L +
Sbjct: 448 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 45/312 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 79
++L + G +H++AL V ++G + GQLG G+ D + SP Q+ +G I + CG
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACG 260
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 261 AEFSMLM--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEYDCELVPRRVAIFIEKT 317
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
I + ++ V+ +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREK 231
F G + AG S AV+E G L+ WG R + P+ V DL +
Sbjct: 378 DFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQ--DLCGWR 429
Query: 232 MVMVACGWRHTISVSSSGRLYSYGWSK-YGQLGHGDFKDH--LVPCQLEALRESFISQIS 288
+ +ACG + +I V++ S+G S +G+LG+GD K +++ L F Q++
Sbjct: 430 IRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488
Query: 289 GGWRHTMAVTSD 300
G+ H++ + D
Sbjct: 489 MGYSHSLVIARD 500
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 219 PEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA 278
P + + R + V+ H++ +++ G+L+S+G ++ GQLGHGD K P +EA
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA 196
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC-SPVQVKF---PLDQ 334
L I + G HT+A+T G ++ +G NK GQ+G+G+ D SP Q+ + P+ +
Sbjct: 197 LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITK 256
Query: 335 ISCGWRHTLAVTERQNVFSWGRGTNGQLGH 364
++CG ++ + + N++S+G GQLGH
Sbjct: 257 MACGAEFSMLMDCKGNLYSFGCPEYGQLGH 286
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 173/365 (47%), Gaps = 53/365 (14%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
LS Q+S +VS C A +E +++SWG D G+LGHG++ L P I+
Sbjct: 118 LSDVQVSC-----VVSGPCAAHSLIITTEG--KLWSWGRNDKGQLGHGDTKRLEAPKLIE 170
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
L + ACG +H LA+T G V ++G N+ GQLG G D+++ + G I
Sbjct: 171 GLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIV 230
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLG------LGDRNDR------LIPEKVAT-VD 226
VA GAE S+ V G LY +G YG LG R R LIP +VA ++
Sbjct: 231 KVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIE 290
Query: 227 LQREKMVM---------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQ 275
++ V+ VACG HT+ + S R++S+G+ YG+LGH + KD +VP +
Sbjct: 291 KTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK 350
Query: 276 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLD-Q 334
L +QI G++ + A++ G L+ WG V + S +P Q
Sbjct: 351 LFDFPGRGATQIYCGYQCSFALSEMGGLFFWG------------VTNTSRESTMYPKAVQ 398
Query: 335 ISCGW--------RHTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDGSK 385
CGW + ++ V + SWG T G+LG+G++ ++S E +LDG
Sbjct: 399 DLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVY 458
Query: 386 GQNIA 390
+ +
Sbjct: 459 SEQVV 463
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 167/353 (47%), Gaps = 41/353 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR + GQLGHGD + +P + L IV+ CG +HT A +
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQ 146
E+ VY++G G+LG GN +D + +P I+ + + ++ACG + V +G +
Sbjct: 192 ENGT-VYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + L+P+++ F V + VA
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHT 242
GA H++ + ++ WG+G YG LG ++ D ++P V D + CG++ +
Sbjct: 310 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCS 369
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 302
++S G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 370 FALSEMGGLFFWGVTNTSR------ESTMYPKAVQDLCGWKIRSLACG-KSSIIVAADDS 422
Query: 303 LYGWGWN-KFGQVGVGDNVDHCSPVQVKFPL------DQISCGWRHTLAVTER 348
WG + FG++G GDN S + +Q+ G+ H+L + +
Sbjct: 423 TISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 45/309 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR-LSPTQLSALDGHEIVSVTCG 79
++ + G +H++AL V ++G + GQLG G+ D LSP + +G IV V CG
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACG 235
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 236 AEFSMIV--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEFDCELIPRRVAIFIEKT 292
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
+ + ++ + +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 293 KDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 352
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREK 231
F G + G + S A++E G L+ WG + R + P+ V DL K
Sbjct: 353 DFPGRGATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQ--DLCGWK 404
Query: 232 MVMVACGWRHTISVSSSGRLYSYGWS-KYGQLGHGDFKDH--LVPCQLEALRESFISQIS 288
+ +ACG + +I V++ S+G S +G+LG+GD K +++ L + Q+
Sbjct: 405 IRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVV 463
Query: 289 GGWRHTMAV 297
G+ H++ +
Sbjct: 464 MGYSHSLVI 472
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 41/258 (15%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG------------DAEDRLSPTQLS 66
+P++ ++ GA S+ + + S+G E GQLGH + + L P +++
Sbjct: 227 QPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVA 286
Query: 67 AL-----DGHEIV-------SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
DG + V CGA+HT +S +V+SWG+G +GRLGH D
Sbjct: 287 IFIEKTKDGQVLPVPNVVARDVACGANHTLVL-DSQKRVFSWGFGGYGRLGHAEQKDEMV 345
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
P +K QI CG A++ G + WG + E ++ P+ +Q
Sbjct: 346 PRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPKAVQD 399
Query: 173 FEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVD-LQ 228
G I+ +A G + S+ VA D WG +G LG GD + ++V T+D +
Sbjct: 400 LCGWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVY 458
Query: 229 REKMVMVACGWRHTISVS 246
E++VM G+ H++ ++
Sbjct: 459 SEQVVM---GYSHSLVIA 473
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 171/359 (47%), Gaps = 46/359 (12%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
L+ + +VS +C A +E +++SWG + G+LGHG++ + P I+ L
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEG--KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE 202
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ ACG +H LA+T G V ++G N+ GQLGLG D++ + G I +A G
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 262
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGD------RNDR------LIPEKVAT-VDLQREK 231
AE S+ + G LY +G YG LG R R L+P +VA ++ ++
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 232 MVM---------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQLEALR 280
++ VACG HT+ + S R++S+G+ YG+LGH + KD +VP +L
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 382
Query: 281 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISCGWR 340
SQI G+ + AV+ G L+ WG N S + K D CGWR
Sbjct: 383 GRGASQIYAGYTCSFAVSEVGGLFFWG---------ATNTSRESTMYPKAVQDL--CGWR 431
Query: 341 --------HTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 390
++ V ++ SWG T G+LG+G+ ++S E +LDG + +A
Sbjct: 432 IRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 47/362 (12%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR E GQLGHGD + +P + L IVS CG +HT A +
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
E+ V+++G G+LG GN +D P P + +++ + + ++ACG + + +G +
Sbjct: 219 ET-GSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + LVP+++ F V ++ VA
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHT 242
GA H++ + ++ WG+G YG LG ++ D ++P V D + G+ +
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 302
+VS G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 397 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADES 449
Query: 303 LYGWGWNK-FGQVGVGDNVDHCSPVQVKFPL------DQISCGWRHTLAV------TERQ 349
WG + FG++G GD+ S + +Q++ G+ H+L + TE++
Sbjct: 450 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKE 509
Query: 350 NV 351
+
Sbjct: 510 KI 511
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 45/312 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 79
++ + G +H++AL V ++G + GQLG G+ D + SP Q+ +G I + CG
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACG 262
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 263 AEFSMIM--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEYDCELVPRRVAIFIEKT 319
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
I + ++ V+ +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREK 231
F G + AG S AV+E G L+ WG R + P+ V DL +
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQ--DLCGWR 431
Query: 232 MVMVACGWRHTISVSSSGRLYSYGWSK-YGQLGHGDFKDH--LVPCQLEALRESFISQIS 288
+ +ACG + +I V++ S+G S +G+LG+GD K +++ L F Q++
Sbjct: 432 IRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Query: 289 GGWRHTMAVTSD 300
G+ H++ + D
Sbjct: 491 MGYSHSLVIARD 502
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 41/258 (15%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG------------DAEDRLSPTQLS 66
+P+ ++ GA S+ + + S+G E GQLGH + + L P +++
Sbjct: 254 QPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 313
Query: 67 AL-----DGH-------EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
DG + V CGA+HT +S +V+SWG+G +GRLGH D
Sbjct: 314 IFIEKTKDGQILPVPNVVVRDVACGANHTLVL-DSQKRVFSWGFGGYGRLGHAEQKDEMV 372
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
P +K QI G + AV+ G + WG + E ++ P+ +Q
Sbjct: 373 PRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQD 426
Query: 173 FEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVD-LQ 228
G I+ +A G + S+ VA D WG +G LG GD + ++V T+D +
Sbjct: 427 LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF 485
Query: 229 REKMVMVACGWRHTISVS 246
E++ M G+ H++ ++
Sbjct: 486 SEQVAM---GYSHSLVIA 500
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIK 179
L ++ QI CGD H LA++ GE+ +WG+N +GQLG+G S PQ ++ GV +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGW 239
++AG HS+A++ G +Y WG G LGLG + P + +D Q K+ VACG
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQ--KVEFVACGG 252
Query: 240 RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
H+ ++ G L+++G K+GQLGH ++ L PC + L ++QI+ G HT+A S
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312
Query: 300 D-GKLYGWGWNKFGQVGVGDNVDHCSPVQVK 329
D GK++ +G K GQ+G G D P+ VK
Sbjct: 313 DLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 5/210 (2%)
Query: 66 SALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALHSL 124
S L +I+ +TCG H+ A S+ ++++WG G+LG G TP ++ L +
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGG-ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ QI+ G++H +A+++ G + SWG+N+ GQLGLG TE P ++ + ++ VA G
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS 244
HS + +DG L+ +G G++G LG + L P VA +L ++ +ACG HT++
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGYRVTQIACGRWHTLA 309
Query: 245 -VSSSGRLYSYGWSKYGQLGHGDFKDHLVP 273
VS G+++S+G K GQLG+G +D L+P
Sbjct: 310 YVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 25/269 (9%)
Query: 114 TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF 173
TP IK ++++ + G H L ++ +G+ + L +S++ +K
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRF----ESILQEK---- 138
Query: 174 EGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDR----NDRLIPEKVATVDLQR 229
I + G HS+A+++ GEL+ WG +G LG+G + I E +A V L +
Sbjct: 139 ---KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195
Query: 230 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISG 289
++ G H++++S SG +YS+G ++ GQLG G + P +E L + ++
Sbjct: 196 -----ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVAC 250
Query: 290 GWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLA- 344
G H+ +T DG L+ +G K GQ+G + P V + + QI+CG HTLA
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAY 310
Query: 345 VTERQNVFSWGRGTNGQLGHGESSDRNSP 373
V++ VFS+G G +GQLG+G + D+ P
Sbjct: 311 VSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 4/190 (2%)
Query: 20 PVLLISAGASHSVAL-LSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
P+ ISAG +HS+AL +SGNI SWG+ E GQLG G E + P+ + LD ++ V C
Sbjct: 192 PLAQISAGEAHSMALSMSGNIY-SWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVAC 250
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
G H+ ++ + ++++G G G+LGH ++ + P + L RV QIACG H LA
Sbjct: 251 GGSHSALLTQDGL-LFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309
Query: 139 -VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGEL 197
V+ G+V S+G ++GQLG G T D L+P ++ +K+ + +E + + G
Sbjct: 310 YVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQ 369
Query: 198 YGWGWGRYGN 207
W + N
Sbjct: 370 SILLWIKKEN 379
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 125/231 (54%), Gaps = 12/231 (5%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVT 77
+ ++ I+ G HS+AL G + +WG+ GQLG G +P + L G + ++
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
G H+ A S S +YSWG + G+LG G++ P I+ L + +V+ +ACG SH
Sbjct: 198 AGEAHSMALSMSG-NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSA 256
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAED-GE 196
+T +G + ++G ++GQLG +T++ L P + G + +A G H++A D G+
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK 316
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKV---ATVDLQRE------KMVMVACG 238
++ +G G+ G LG G D+L+P V ++ +L+ E +++M+A G
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGG 367
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
Query: 167 PQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD 226
P+ ++ + + I V GAEH + ++ DG+ + Y N + I
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF-----EYDNYSMKHLRFESI-------- 134
Query: 227 LQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFIS 285
LQ +K++ + CG H++++S G L+++G + +GQLG G F P +E L ++
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 286 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRH 341
QIS G H+MA++ G +Y WG N+ GQ+G+G P ++ ++ ++CG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 342 TLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
+ +T+ +F++G G +GQLGH + + P ++ L
Sbjct: 255 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL 292
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 297
G H + +SS G+ + Y Y + H F+ L+E I QI+ G H++A+
Sbjct: 105 GAEHMLILSSDGKPFEY--DNYS-MKHLRFES--------ILQEKKIIQITCGDYHSLAL 153
Query: 298 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK-----FPLDQISCGWRHTLAVTERQNVF 352
+ G+L+ WG N GQ+GVG + Q+ PL QIS G H++A++ N++
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 213
Query: 353 SWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 390
SWG+ GQLG G + ++ P +IE LD K + +A
Sbjct: 214 SWGKNECGQLGLGHTESKDDPSLIE--GLDNQKVEFVA 249
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V ++ G SHS L ++ ++G G+ GQLGH ++ L P ++ L G+ + + CG
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGR 304
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
HT AY +V+S+G G G+LG+G + D PLP+K S +K + S +
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK-LESHTSEKELIM 363
Query: 141 VEGEVQS---WGRNQNGQLGLGTTEDSL 165
+ G QS W + +N + L T +L
Sbjct: 364 IAGGNQSILLWIKKENSYVNLKRTIPTL 391
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 167/355 (47%), Gaps = 32/355 (9%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G + V+C
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNS--SDLFTPLPIKALHSLRVKQIACGDSHC 136
G+D T ++ Q+YS+G +G LG S S++ PL + + V Q++CGDSH
Sbjct: 416 GSDFTVCITDE-GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHI 474
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+A+T V SWG + G+LGL + +D PQK++ G+ I V G++ S + G+
Sbjct: 475 MALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGK 534
Query: 197 LYGWGWGRYGNLGL-----GDRNDRLIPEKVATVDLQREKMVM------VACGWRHTISV 245
+ G + LGL G N E T L K + ++ G HT ++
Sbjct: 535 VLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Query: 246 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 304
GRL ++G +K GQLG GD++ HL + L + ++S G T A T+D ++
Sbjct: 595 DERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIF 654
Query: 305 GWGWNKFGQVGVGDN-----VDHCS--PVQVKFPLDQI---SC-GWRHTLAVTER 348
WG G++ + N D C+ P + L + SC GW HT+ + E+
Sbjct: 655 AWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSCRGW-HTILIVEK 708
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 22/264 (8%)
Query: 125 RVKQIACGDSHCLAVTVEGEVQSW-----GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
R +Q+ GD+H VTVE E+ +W G +GQLG G P+ ++ +G S++
Sbjct: 352 RARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGW 239
V+ G++ +V + ++G+LY +G YG LG+ + E + E + V+CG
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 240 RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
H ++++ S +YS+G +YG+LG D P ++E R I + G + +T
Sbjct: 472 SHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Query: 300 DGKLYGWGWNKFGQVGVGDN----VDHCSPVQVK-------------FPLDQISCGWRHT 342
GK+ G N+ ++G+ ++H + +V + + IS G HT
Sbjct: 532 TGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHT 591
Query: 343 LAVTERQNVFSWGRGTNGQLGHGE 366
A+ ER + ++G GQLG G+
Sbjct: 592 AAIDERGRLLTFGSNKCGQLGVGD 615
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 230 EKMVMVACGWR---------HTISVSSSGRLYSY-----GWSKYGQLGHGDFKDHLVPCQ 275
+K+ + GWR H V+ LY++ G +GQLGHGD + P
Sbjct: 342 QKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKH 401
Query: 276 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNV--DHCSPVQVKF--- 330
+E L+ + ++S G T+ +T +G+LY +G + +G +GV + + P+ V F
Sbjct: 402 VEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN 461
Query: 331 -PLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIE 377
P+DQ+SCG H +A+T ++V+SWG G G+LG D SP+ +E
Sbjct: 462 EPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVE 509
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 5 SAASEAASTTAAPF---RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS 61
SA SE F PV +S G SH +AL V SWG GE G+LG +D S
Sbjct: 445 SAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYS 504
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSS------DLFTP 115
P ++ G IV+V CG+D + + + +V + G + +LG + + F
Sbjct: 505 PQKVEVQRGLCIVNVCCGSDGSFLLTLT-GKVLACGLNEHNKLGLNQYTAGIINHEAFQE 563
Query: 116 LPI-------KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
+P K L +++ I+ G +H A+ G + ++G N+ GQLG+G L
Sbjct: 564 VPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGIN 623
Query: 169 KL-QAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL 210
L G + V+ G E + A D ++ WG G G L +
Sbjct: 624 LLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 334 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 379
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKL 405
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 37/352 (10%)
Query: 62 PTQLSALDGHEIVSV---TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPI 118
P + L G ++ SV +C A E +++SWG D G+LGHG+ + P I
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEG--KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 119 KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSI 178
++L ACG +H LA+T G V ++G N+ GQLGLG D++ + G I
Sbjct: 188 ESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI 247
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGD------RNDR------LIPEKVAT-V 225
VA GAE S+ + G LY +G YG LG R R LI ++A +
Sbjct: 248 TKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFI 307
Query: 226 DLQREKMVM---------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--C 274
+ ++ ++ +ACG H++ + S R++S+G+ YG+LGH + +D +VP
Sbjct: 308 EKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLV 367
Query: 275 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQ--VKFPL 332
+L +QI G + AV+ G L+ WG + D+ + VQ + +
Sbjct: 368 KLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSR----DSTMYPKAVQDLCGWKV 423
Query: 333 DQISCGWRHTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDG 383
++CG + ++ V ++ SWG T G+LG+G++ ++S E +LDG
Sbjct: 424 RSLACG-KSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDG 474
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 41/350 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + SWGR + GQLGHGD + P + +L G V CG +HT A +
Sbjct: 150 AAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALT 209
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
E+ VY++G G+LG GN +D P P + L++ + + ++ACG + + +G +
Sbjct: 210 ENG-SVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAEFSMIMDCKGNLY 267
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + L+ +++ F V ++ +A
Sbjct: 268 SFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIA 327
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHT 242
G HS+ + ++ WG+G YG LG ++ D ++P V D + G +
Sbjct: 328 CGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCS 387
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 302
+VS G L+ +G + + + P ++ L + ++ G + ++ V +D
Sbjct: 388 FAVSEMGGLFFWGATNTSR------DSTMYPKAVQDLCGWKVRSLACG-KSSIIVAADES 440
Query: 303 LYGWGWN-KFGQVGVGDNVDHCSPVQVKFPL------DQISCGWRHTLAV 345
WG + FG++G GDN S + DQ+ G HTL V
Sbjct: 441 TISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVV 490
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 43/307 (14%)
Query: 25 SAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCGADHT 83
+ G +H++AL V ++G + GQLG G+ D + SP Q+ +G I V CGA+ +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFS 257
Query: 84 TAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTPL------------------------PI 118
C +YS+G ++G+LGH + I
Sbjct: 258 MIM--DCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQI 315
Query: 119 KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQAFEGV 176
+ ++ V+ IACG +H L + + V SWG G+LG D +VP+ KL F G
Sbjct: 316 LPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGR 375
Query: 177 SIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVA 236
+ AGA S AV+E G L+ WG R+ + P+ V DL K+ +A
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPKAVQ--DLCGWKVRSLA 427
Query: 237 CGWRHTISVSSSGRLYSYGWS-KYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRH 293
CG + +I V++ S+G S +G+LG+GD K +++ L + Q+ G H
Sbjct: 428 CG-KSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSH 486
Query: 294 TMAVTSD 300
T+ V D
Sbjct: 487 TLVVARD 493
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 43/259 (16%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIV---- 74
+P+ ++ GA S+ + + S+G E GQLGH ++ Q D I
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 75 --------------------SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
+ CG +H+ +S +V+SWG+G +GRLGH D
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLIL-DSQKRVFSWGFGGYGRLGHSEQRDEMV 363
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDS-LVPQKLQ 171
P +K QI G + AV+ G + WG T+ DS + P+ +Q
Sbjct: 364 PRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGATN-------TSRDSTMYPKAVQ 416
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVD-L 227
G ++ +A G + S+ VA D WG +G LG GD + ++V T+D +
Sbjct: 417 DLCGWKVRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGI 475
Query: 228 QREKMVMVACGWRHTISVS 246
++++M G HT+ V+
Sbjct: 476 YSDQVIM---GNSHTLVVA 491
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALD--GHEIVSVTCGAD 81
I+ G +HS+ L S V SWG G G+LGH + D + P + D G + GA
Sbjct: 326 IACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGAT 385
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+ A SE ++ WG + R S ++ P ++ L +V+ +ACG S +
Sbjct: 386 CSFAVSE-MGGLFFWGATNTSR-----DSTMY-PKAVQDLCGWKVRSLACGKSSIIVAAD 438
Query: 142 EGEVQSWGRNQN-GQLGLG--TTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAED 194
E + SWG + G+LG G + S Q+++ +G+ V G H++ VA D
Sbjct: 439 ESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 164/360 (45%), Gaps = 38/360 (10%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V I+ G HS + G + G +DGQLG G ED T +L G I V C
Sbjct: 49 RSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVAC 108
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
G D T +E+ QV S G FG+LG HG P I+ LH +V IA G H
Sbjct: 109 GWDFTIMLTEN-GQVLSCGSNSFGQLGVPHG-PRRCVVPQAIE-LHKEKVVCIAAGLRHA 165
Query: 137 LAVTVEGEVQSWG--------RNQNGQ-LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH 187
+A T G V WG R GQ L L T P ++ E V AG++H
Sbjct: 166 VAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGSDH 223
Query: 188 SVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSS 247
S ++ + GE+Y WG ++G L + +P+K+ Q EK+ + GW H ++ +
Sbjct: 224 SASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 282
Query: 248 SGRLYSYGWSKYGQLGHG---------DFKDHLVPCQLEALRE-------SFISQISGGW 291
+G+++++G + YGQLG + +D +PC + +++S G
Sbjct: 283 TGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGS 342
Query: 292 RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ----ISCGWRHTLAVTE 347
H +A+ G Y WGWN+ G G G + +P V+ L + CG H+LA+ +
Sbjct: 343 EHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 165/367 (44%), Gaps = 45/367 (12%)
Query: 48 DGQLGHGDAEDRLSPTQLSAL-DGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGH 106
GQLG G ED L P QL+ + +T G H+ ++ ++ G G+LG
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG-GDLFVCGLNKDGQLGL 83
Query: 107 GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSL 165
G++ D+ P K+L ++Q+ACG + +T G+V S G N GQLG+ +
Sbjct: 84 GHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV 143
Query: 166 VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP------ 219
VPQ ++ + +AAG H+VA G ++ WG GL RL P
Sbjct: 144 VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL 196
Query: 220 -----EKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPC 274
E L+ K + V G H+ S++ +G +Y +G +K+GQL + + VP
Sbjct: 197 FFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQ 255
Query: 275 QLEA--LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG------------DNV 320
++EA + ++ I GW H +A T GK++ WG +GQ+G D+
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSF 315
Query: 321 DHCSPVQVKFP--------LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 372
CS P ++SCG H LA+ +SWG +G G G ++ +
Sbjct: 316 LPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGV-CYSWGWNEHGMCGDGTEANVWA 374
Query: 373 PKIIEPL 379
PK ++ L
Sbjct: 375 PKPVQAL 381
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E + T + + AG+ HS +L V WG + GQL + +A P ++
Sbjct: 200 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG---------NSSDLFTP 115
A ++ ++ G H A +E+ ++++WG D+G+LG D F P
Sbjct: 259 AHCFQNEKVTAIWSGWTHLVAQTET-GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 116 L--PIKAL----HSLR-VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
P ++ H L +++CG H LA+ + G SWG N++G G GT + P+
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPK 376
Query: 169 KLQAFEGVSIKMVAAGAEHSVAVAE 193
+QA S +V GA HS+A+ +
Sbjct: 377 PVQALLSSSGLLVGCGAGHSLALCQ 401
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 163/362 (45%), Gaps = 50/362 (13%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G HS + G + G +DGQLG G E+ L T L G I V CG D T
Sbjct: 54 VTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFT 113
Query: 84 TAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+E QV S G FG+LG HG P I+ L +V +A G H LA T
Sbjct: 114 IMLTEK-GQVLSCGSNAFGQLGVPHG-PRKCVVPQAIECLRE-KVVCVAAGLRHALATTA 170
Query: 142 EGEVQSWGR-----------NQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA 190
G V WG QN L L E P ++ E + AG++HS +
Sbjct: 171 TGSVFQWGTGLASSGRRLCPGQNLPLFLTAKE----PSRVTGLENSTAVCAVAGSDHSAS 226
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRL-IPEKVATVDLQREKMVMVACGWRHTISVSSSG 249
+ + GELY WG ++G L R L +P+++ Q EK+ V GW H ++ + +G
Sbjct: 227 LTDTGELYVWGRNKHGQ--LASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 250 RLYSYGWSKYGQLGHG----------------DFK--DHLVPCQLEALRESFISQISGGW 291
+++++G + YGQLG F+ + VP L L + ++IS G
Sbjct: 285 KVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGA--TEISCGS 342
Query: 292 RHTMAVTSDGKLYGWGWNKFGQVGVG--DNVDHCSPVQVKFP----LDQISCGWRHTLAV 345
H +AV D K WGWN+ G G G NV +PVQ P L + CG H+LAV
Sbjct: 343 EHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 401
Query: 346 TE 347
+
Sbjct: 402 CQ 403
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 173/420 (41%), Gaps = 68/420 (16%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL 60
MA S ASE S A F +WG GQLG G ED
Sbjct: 1 MARESCASETVSAAAVLF-----------------------AWGANSYGQLGLGHKEDVF 37
Query: 61 SPTQLSAL-DGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
P QLS I SVT G H+ ++ ++ G G+LG G++ ++ K
Sbjct: 38 LPQQLSDFCQAGCIKSVTGGGGHSAVVTDG-GDLFVCGLNKDGQLGLGHTEEVLRFTICK 96
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSI 178
L ++Q+ACG + +T +G+V S G N GQLG+ +VPQ ++ +
Sbjct: 97 PLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLR-EKV 155
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP-----------EKVATVDL 227
VAAG H++A G ++ WG GL RL P E L
Sbjct: 156 VCVAAGLRHALATTATGSVFQWG------TGLASSGRRLCPGQNLPLFLTAKEPSRVTGL 209
Query: 228 QREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA--LRESFIS 285
+ V G H+ S++ +G LY +G +K+GQL L P ++EA ++ ++
Sbjct: 210 ENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIEAHYFQDEKVT 268
Query: 286 QISGGWRHTMAVTSDGKLYGWGWNKFGQVG--------------------VGDNVDHCSP 325
+ GW H +A T GK++ WG +GQ+G G SP
Sbjct: 269 AVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSP 328
Query: 326 VQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSK 385
+ +ISCG H LAV R SWG +G G G S+ +P ++ L S+
Sbjct: 329 LHCLTGATEISCGSEHNLAVI-RDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 21/328 (6%)
Query: 93 VYSWGWGDFGRLGHGNSSDLFTPLPIKAL-HSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+++WG +G+LG G+ D+F P + + +K + G H VT G++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 152 QNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL- 210
++GQLGLG TE+ L + G I+ VA G + ++ + E G++ G +G LG+
Sbjct: 77 KDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP 136
Query: 211 -GDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW---SKYGQLGHGD 266
G R ++P+ + + REK+V VA G RH ++ +++G ++ +G S +L G
Sbjct: 137 HGPRKC-VVPQAIECL---REKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQ 192
Query: 267 ----FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDH 322
F P ++ L S G H+ ++T G+LY WG NK GQ+ V
Sbjct: 193 NLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL-ASRAVFL 251
Query: 323 CSPVQVK---FPLDQISC---GWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKII 376
P +++ F ++++ GW H +A TE VF+WGR GQLG +
Sbjct: 252 PLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVE 311
Query: 377 EPLSLDGSKGQNIASSKYDPSSGKTWVS 404
+ SL QN S +G T +S
Sbjct: 312 QDSSLAFQGPQNSVPSPLHCLTGATEIS 339
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRL----SPTQLSALDGHEI 73
V+ ++AG H++A + V WG G +L G P++++ L+
Sbjct: 155 VVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTA 214
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLP--IKA--LHSLRVKQI 129
V G+DH+ + +++ ++Y WG G+L S +F PLP I+A +V +
Sbjct: 215 VCAVAGSDHSASLTDT-GELYVWGRNKHGQLA---SRAVFLPLPQRIEAHYFQDEKVTAV 270
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGL---------GTTEDS---------LVPQKLQ 171
G +H +A T G+V +WGR GQLG +DS VP L
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREK 231
G + ++ G+EH++AV D + WGW +G G G ++ P V + +
Sbjct: 331 CLTGAT--EISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Query: 232 MVMVACGWRHTISV 245
+++V CG H+++V
Sbjct: 388 LLLVGCGAGHSLAV 401
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 27/209 (12%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E + T + AG+ HS +L + WGR + GQL L P ++
Sbjct: 200 AKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG------------HGNSSDL 112
A ++ +V G H A +E+ +V++WG D+G+LG +SS
Sbjct: 259 AHYFQDEKVTAVWSGWTHLVAKTET-GKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLA 317
Query: 113 F------TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV 166
F P P+ L +I+CG H LAV + + SWG N++G G GT +
Sbjct: 318 FQGPQNSVPSPLHCLTG--ATEISCGSEHNLAV-IRDKCCSWGWNEHGMCGDGTESNVWT 374
Query: 167 PQKLQAFEGVS--IKMVAAGAEHSVAVAE 193
P +QA + +V GA HS+AV +
Sbjct: 375 PTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 32/349 (9%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-----AEDRLSPTQLSAL----DGH 71
V+ +S G + + + + +W E +G G+ A +++ P +S G
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITW---EAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGV 398
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC 131
I SV+CG TT ++ + + ++G G G LGHGN +D+ P ++AL + Q++C
Sbjct: 399 TIKSVSCGDLFTTCLTDRGI-IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSC 457
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAV 191
G SH LAVT E EV SWGR NG+LGL T + PQ++ + V G + S+ +
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIM 517
Query: 192 AEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD------------LQREKMVMVACGW 239
+ ++ G R+ LGL + P V+ L EK+V + G
Sbjct: 518 STQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGT 577
Query: 240 RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
H+++V+ G+ +++G +++GQLG + VP Q+ L+ I+ + G T+A+ +
Sbjct: 578 AHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLAIGA 635
Query: 300 DGKLYGWGWNKFGQVGVG-DNVDHCSPVQV----KFPLDQISCGWRHTL 343
+G++Y WG G++G ++ PVQ+ F + ++C +TL
Sbjct: 636 EGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVACCHGNTL 684
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 24/283 (8%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K ++CGD +T G + ++G NG LG G D P+ ++A G + V+ GA
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGA 459
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDLQREKMVMVACGWRHTIS 244
H +AV + E++ WG G G LGL ++ P++V+ D + ++ V CG ++
Sbjct: 460 SHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR---VLCGVDCSMI 516
Query: 245 VSSSGRLYSYGWSKYGQLGHGDFKDHLVP---CQLE-----------ALRESFISQISGG 290
+S+ ++ + G +++ +LG P CQ+E L I I G
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 291 WRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP--LDQISCGWRHTLAVTER 348
H++AVT G+ + +G N+ GQ+G P QV + +CG TLA+
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMAACGDAFTLAIGAE 636
Query: 349 QNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
V++WG+G G+LG E D PK P+ LD S + S
Sbjct: 637 GEVYTWGKGARGRLGRKE-EDFGIPK---PVQLDESHAFTVTS 675
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 231 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQ---- 286
+++ V+ G + V+ SGRL ++ G + +P +E ++ FIS+
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGS------GEPTLPGAVEQMQPQFISRFLEG 394
Query: 287 --------ISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQ 334
+S G T +T G + +G G +G G+ D P V+ + L Q
Sbjct: 395 QSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454
Query: 335 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPK 374
+SCG H LAVT + VFSWGRG NG+LG N P+
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQ 494
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 273 PCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG--QVGVGDNVDHCSPVQVKF 330
P +L L I Q+S G M VT G+L W G + + V+ P +
Sbjct: 332 PLRLPMLNTEVI-QVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISR 390
Query: 331 PLD--------QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
L+ +SCG T +T+R + ++G G+NG LGHG +D PKI+E L
Sbjct: 391 FLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL 447
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 32/355 (9%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G I V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHC 136
G D T ++ Q+Y++G +G +G + ++ P+ + S V+Q++CGD+H
Sbjct: 434 GDDFTVCVTDE-GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+ +T EV SWG + G+LGL + ED PQK+ + + I V G + + + + G+
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEK-------VATVDLQRE----KMVMVACGWRHTISV 245
+ G + LGL +I + + L ++ K+ +A G HT ++
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 246 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 304
GRL ++G +K GQLG G++K L + L + ++S G T+A T D ++
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 305 GWGWNKFGQVGVGDN-VDHCSPVQVKFP---------LDQISC-GWRHTLAVTER 348
WG G++ + H S + +P + +SC GW HT+ + E+
Sbjct: 673 AWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGW-HTILIVEK 726
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS-LRVKQIACGDSHCLAVTVEGEVQSW-- 148
+VY WG G TP + + S +Q+ G++H VTVE E+ +W
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVN 395
Query: 149 ---GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G +GQLG G P+ ++ +G +I+ V+ G + +V V ++G+LY +G Y
Sbjct: 396 MQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYY 455
Query: 206 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 265
G +G+ + E + + V+CG H + ++ + +YS+G +YG+LG
Sbjct: 456 GCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 515
Query: 266 DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD---- 321
+D+ P +++ + I + G T +T GK+ G N+F ++G+ +
Sbjct: 516 SEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 575
Query: 322 ----HCSPVQVKFPLDQ---------ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 368
H P F L + I+ G HT A+ ER + ++G GQLG G
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK 635
Query: 369 DR 370
R
Sbjct: 636 KR 637
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV +S G +H V L V SWG GE G+LG ED +P ++ IV+V CG
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLPI-------KALHSLRV 126
D T ++S +V + G +F +LG + + + +P K L ++
Sbjct: 541 CDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 127 KQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGA 185
+ IA G +H A+ G + ++G N+ GQLG+G + L L G + V+ G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGL 210
E ++A +D ++ WG G G L +
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSV 76
F + I+ G +H+ A+ + ++G + GQLG G+ + RL L L G +++ V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLG-------HGNSSDLFTPLPIKALHSL-RVKQ 128
+CG + T A ++ +++WG G GRL HG SD+ T P SL V
Sbjct: 656 SCGDEFTIAATDD-NHIFAWGNGGNGRLAMTPTERPHG--SDICTSWPRPIFGSLHHVPD 712
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++C H + + + R+ + L +GT S P
Sbjct: 713 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVFQSSSP 751
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 334 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 379
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL 423
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 32/355 (9%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G I V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHC 136
G D T ++ Q+Y++G +G +G S ++ P+ + S V+Q++CGD+H
Sbjct: 434 GDDFTVCVTDE-GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+ +T EV SWG + G+LGL + ED PQ++ + + I V G + + + + G+
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEK-------VATVDLQRE----KMVMVACGWRHTISV 245
+ G + LGL +I + + L ++ K+ +A G HT ++
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 246 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 304
GRL ++G +K GQLG G++K L + L + ++S G T+A T D ++
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 305 GWGWNKFGQVGVGDN-VDHCSPVQVKFP---------LDQISC-GWRHTLAVTER 348
WG G++ + H S + +P + +SC GW HT+ + E+
Sbjct: 673 AWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGW-HTILIVEK 726
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS-LRVKQIACGDSHCLAVTVEGEVQSW-- 148
+VY WG G TP + + S +Q+ G++H VTVE E+ +W
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVN 395
Query: 149 ---GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G +GQLG G P+ ++ +G +I V+ G + +V V ++G+LY +G Y
Sbjct: 396 MQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYY 455
Query: 206 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 265
G +G+ + + E + + V+CG H + ++ + +YS+G +YG+LG
Sbjct: 456 GCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 515
Query: 266 DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD---- 321
+D+ P +++ + I + G T +T GK+ G N+F ++G+ +
Sbjct: 516 SEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 575
Query: 322 ----HCSPVQVKFPLDQ---------ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 368
H P F L + I+ G HT A+ ER + ++G GQLG G
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK 635
Query: 369 DR 370
R
Sbjct: 636 KR 637
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 26/205 (12%)
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTIS 244
A +V + E+Y WG G+ P+K+ + V G H
Sbjct: 337 APIAVVTSRTSEVYVWGGGKS------------TPQKLDVIK-SGCSARQVCAGNTHFAV 383
Query: 245 VSSSGRLYSY-----GWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 299
V+ LY++ G +GQLGHGD + P +E L+ I Q+S G T+ VT
Sbjct: 384 VTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 300 DGKLYGWGWNKFGQVGVGDNV---DHCSPVQVKF----PLDQISCGWRHTLAVTERQNVF 352
+G+LY +G + +G +GV D V + P+Q+ F P++Q+SCG H + +T + V+
Sbjct: 444 EGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVY 502
Query: 353 SWGRGTNGQLGHGESSDRNSPKIIE 377
SWG G G+LG D +P+ ++
Sbjct: 503 SWGCGEYGRLGLDSEEDYYTPQRVD 527
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV +S G +H V L V SWG GE G+LG ED +P ++ IV+V CG
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLPI-------KALHSLRV 126
D T ++S +V + G +F +LG + + + +P K L ++
Sbjct: 541 CDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 127 KQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGA 185
+ IA G +H A+ G + ++G N+ GQLG+G + L L G + V+ G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGL 210
E ++A +D ++ WG G G L +
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSV 76
F + I+ G +H+ A+ + ++G + GQLG G+ + RL L L G +++ V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLG-------HGNSSDLFTPLPIKALHSL-RVKQ 128
+CG + T A ++ +++WG G GRL HG SD+ T P SL V
Sbjct: 656 SCGDEFTIAATDD-NHIFAWGNGGNGRLAMTPTERPHG--SDICTSWPRPIFGSLHHVPD 712
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++C H + + + R+ + L +GT S P
Sbjct: 713 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSP 751
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 334 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 379
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL 423
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 151/296 (51%), Gaps = 18/296 (6%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
L G I V CG T ++ + + ++G G G LGHG+ +D+ P ++AL
Sbjct: 385 LEGQSGVTIKHVACGDFFTACLTDRGI-IMTFGSGSNGCLGHGSLTDISQPTIVEALLGY 443
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ Q+ACG SH LA++ E E+ +WGR +G+LGLGT E PQ++ G + V G
Sbjct: 444 EMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG 503
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRN--DRLIPEK----------VATVDLQREKM 232
+ S+ + G+ G R+ LGL + + +P + + + L +E +
Sbjct: 504 IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPL 563
Query: 233 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR 292
+ + G H+ +V++SG Y++G +++GQLG + PC+++ L ++ ++ G
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDA 623
Query: 293 HTMAVTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQV----KFPLDQISCGWRHTL 343
T+A+ ++ ++Y WG G++G D + PVQ+ + + +SC +TL
Sbjct: 624 FTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTL 679
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 138/285 (48%), Gaps = 26/285 (9%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K +ACGD +T G + ++G NG LG G+ D P ++A G + VA GA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISV 245
H +A++ + EL+ WG G G LGLG R P++V Q + V+ CG ++ +
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVV--CGIDSSMIL 510
Query: 246 SSSGRLYSYGWSKYGQLG--HGDFKDHLVPCQL--EAL-----------RESFISQISGG 290
+ G+ + G +++ +LG H + VP Q EAL +E +S I G
Sbjct: 511 TVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLS-IDLG 569
Query: 291 WRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLAVT 346
H+ AVT+ G Y +G N+ GQ+G +P +V+ + ++CG T+A+
Sbjct: 570 TAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIG 629
Query: 347 ERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
V+SWG+G G+LG D P+ P+ LD + + S
Sbjct: 630 AESEVYSWGKGARGRLGR-RDEDAGLPR---PVQLDETHPYTVTS 670
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 20/281 (7%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G + L I+ ++G G +G LGHG D PT + AL G+E+V V CGA H
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 455
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
A S ++++WG GD GRLG G P + +++ CG + +TV G
Sbjct: 456 LALSTE-RELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPG 514
Query: 144 EVQSWGRNQNGQLGLG--TTEDSLVPQKLQAFEGVSIKMVAA-------------GAEHS 188
+ + G N+ +LGL + + VP + Q E +S ++ + G HS
Sbjct: 515 QALACGSNRFNKLGLDHLSLGEEPVPHQ-QVEEALSFTLLGSAPLDQEPLLSIDLGTAHS 573
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
AV G+ Y +G ++G LG R P KV L+ KM MVACG T+++ +
Sbjct: 574 AAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQ--GLEGIKMAMVACGDAFTVAIGAE 631
Query: 249 GRLYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQIS 288
+YS+G G+LG D L P QL+ ++ +S
Sbjct: 632 SEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVS 672
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
+Y WG G LG R + + ++V VA G V+ SGRL +
Sbjct: 314 VYAWG----GGLGTPLR-----------LPMLNTEVVQVAAGRTQKAGVTRSGRLILWEA 358
Query: 257 SKYGQLGHGDFKDHLVPCQLEALRESFISQ------------ISGGWRHTMAVTSDGKLY 304
G G L+P +E + FIS+ ++ G T +T G +
Sbjct: 359 PPLGAGG-----GSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIM 413
Query: 305 GWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLAVTERQNVFSWGRGTNG 360
+G G +G G D P V+ + + Q++CG H LA++ + +F+WGRG +G
Sbjct: 414 TFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSG 473
Query: 361 QLGHGESSDRNSPK 374
+LG G + P+
Sbjct: 474 RLGLGTRESHSCPQ 487
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 9 EAASTT---AAPF--RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPT 63
EA S T +AP P+L I G +HS A+ + ++G + GQLG +P
Sbjct: 546 EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPC 605
Query: 64 QLSALDGHEIVSVTCGADHTTAY-SESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKAL 121
++ L+G ++ V CG T A +ES +VYSWG G GRLG + + L P+ +
Sbjct: 606 KVQGLEGIKMAMVACGDAFTVAIGAES--EVYSWGKGARGRLGRRDEDAGLPRPVQLDET 663
Query: 122 HSLRVKQIAC 131
H V ++C
Sbjct: 664 HPYTVTSVSC 673
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 273 PCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG---VGDNVDHCSPV--- 326
P +L L + Q++ G VT G+L W G G + V+ P
Sbjct: 324 PLRLPMLNTEVV-QVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS 382
Query: 327 -----QVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
Q + ++CG T +T+R + ++G G+NG LGHG +D + P I+E L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL 440
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 164/364 (45%), Gaps = 38/364 (10%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
I+ G HS + + G +DGQLG G E+ L T +L G I V CG D T
Sbjct: 54 ITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFT 113
Query: 84 TAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+E+ QV S G FG+LG HG + P I+ L +V IA G H LA T
Sbjct: 114 IILTEN-GQVLSCGSNSFGQLGVPHGPRRCVI-PQAIELLRE-KVVSIAAGLRHALAATA 170
Query: 142 EGEVQSWGR---NQNGQLGLGTTEDSLV----PQKLQAFEGVSIKMVAAGAEHSVAVAED 194
G V WG + +L G T + P + E V AG++HS ++ +
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 195 GELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSY 254
GELY WG ++G L L+P+++ Q EK+ V GW H ++ + +G+++++
Sbjct: 231 GELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 255 GWSKYGQLGH------------------GDFKDHLVPCQLEALRESFISQISGGWRHTMA 296
G + YGQLG G P L L + ++IS G H +A
Sbjct: 290 GRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGA--TEISCGSEHNLA 347
Query: 297 VTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV---KFPLD-QISCGWRHTLAVTERQNVF 352
V G + WGWN+ G G G D +P V +F L + CG H+LA+ + +
Sbjct: 348 VIG-GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQLPALP 406
Query: 353 SWGR 356
+ G+
Sbjct: 407 ALGQ 410
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 166/344 (48%), Gaps = 31/344 (9%)
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL-HSLRVKQIACGDSHCLAVT 140
H++ + +++WG +G+LG G+ D+ + + S +K+I G H VT
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGW 200
EG + G N++GQLGLG TE+ L ++ G +I+ VA G + ++ + E+G++
Sbjct: 66 DEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSC 125
Query: 201 GWGRYGNLGLGDRNDR-LIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW--- 256
G +G LG+ R +IP+ ++L REK+V +A G RH ++ ++SG ++ +G
Sbjct: 126 GSNSFGQLGVPHGPRRCVIPQ---AIELLREKVVSIAAGLRHALAATASGTVFQWGTGLA 182
Query: 257 SKYGQLGHGD----FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 312
S +L G F P + L S + G H+ ++T G+LY WG NK G
Sbjct: 183 SSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHG 242
Query: 313 QVGVGDNVDHCSPVQVK---FPLDQISC---GWRHTLAVTERQNVFSWGRGTNGQLG--- 363
Q+ P +++ F ++I+ GW H +A T VF+WGR GQLG
Sbjct: 243 QL-ASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTV 301
Query: 364 ---HGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVS 404
G S++ P SL GS Q S +G T +S
Sbjct: 302 ETREGWESEKQDP------SLPGSGPQKGTPSCLPCLTGATEIS 339
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 167/388 (43%), Gaps = 49/388 (12%)
Query: 31 SVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSAL-DGHEIVSVTCGADHTTAYSES 89
S A+ + + +WG GQLG G ED LS QLS I +T G H+ ++
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 90 CMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG 149
++ G G+LG G++ ++ P K+L ++Q+ACG + +T G+V S G
Sbjct: 68 -GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCG 126
Query: 150 RNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNL 208
N GQLG+ ++PQ ++ + +AAG H++A G ++ WG
Sbjct: 127 SNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATASGTVFQWG------T 179
Query: 209 GLGDRNDRLIP-----------EKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWS 257
GL RL P E L+ + V V G H+ S++ +G LY +G +
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN 239
Query: 258 KYGQLGHGDFKDHLVPCQLEA--LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 315
K+GQL L+P ++EA + I+ + GW H +A T GK++ WG +GQ+G
Sbjct: 240 KHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Query: 316 ----------------------VGDNVDHCSPVQVKFPLDQISCGWRHTLAVTERQNVFS 353
C P +ISCG H LAV S
Sbjct: 299 RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTG--ATEISCGSEHNLAVI-GGVCHS 355
Query: 354 WGRGTNGQLGHGESSDRNSPKIIEPLSL 381
WG +G G G +D +PK + L
Sbjct: 356 WGWNEHGMCGDGTEADVWAPKPVPGLRF 383
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 34/262 (12%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRL----SPTQLSALDGHEI 73
V+ I+AG H++A + V WG G +L G P+ ++ L+ +
Sbjct: 155 VVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQA 214
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHSLRVKQIAC 131
V V G+DH+ + +++ ++Y WG G+L ++ L P I+A + ++ +
Sbjct: 215 VCVLAGSDHSASLTDA-GELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWS 272
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGL------------------GTTEDSLVPQKLQAF 173
G +H +A TV G+V +WGR GQLG G+ P L
Sbjct: 273 GWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCL 332
Query: 174 EGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMV 233
G + ++ G+EH++AV G + WGW +G G G D P+ V L+ +
Sbjct: 333 TGAT--EISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVP--GLRFFLGL 387
Query: 234 MVACGWRHTISVSSSGRLYSYG 255
V CG H++++ L + G
Sbjct: 388 HVGCGAGHSLALCQLPALPALG 409
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E ++ T + + AG+ HS +L + WG + GQL A L P ++
Sbjct: 200 AKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGH------------------ 106
A +I +V G H A + + +V++WG D+G+LG
Sbjct: 259 ARCFQNEKIAAVWSGWTHLVAQTVT-GKVFTWGRADYGQLGRTVETREGWESEKQDPSLP 317
Query: 107 GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV 166
G+ TP + L +I+CG H LAV + G SWG N++G G GT D
Sbjct: 318 GSGPQKGTPSCLPCLTG--ATEISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWA 374
Query: 167 PQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
P+ + V GA HS+A+ + L G
Sbjct: 375 PKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALG 409
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 149/316 (47%), Gaps = 62/316 (19%)
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEG--VSIKMVA 182
R + IACG H L ++ G++ +WG N+ GQ G+G S L +G +I+ +A
Sbjct: 777 RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG---HSFRIANLHQVDGDWPAIEKIA 833
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRN--DRLIPEKVATVDLQREKMVMVACGWR 240
G HS + DG L+ +GWG +G LG G RN ++L+P +V + K+ +ACG
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLIC---KVTQIACGRA 890
Query: 241 HTISVSSSGRLYSYGWSKYGQLG-HGDFKD--HLVPCQLEALRESFISQISGGWRHTMAV 297
HT+ ++ +GR+ G YGQ+G D K P L LR + I+ + H++ +
Sbjct: 891 HTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYYHSICI 947
Query: 298 TSDGKLYGWGWN------------KFGQVGVGDNVDHCSPV------------------- 326
T D +++ WG N K + + D SP
Sbjct: 948 TEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIP 1007
Query: 327 -------QVKFPLD----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP-K 374
+VK LD ++CG H+ +T +++WG+G + QLGHG ++R P +
Sbjct: 1008 REDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQ 1067
Query: 375 IIEPLSLDGSKGQNIA 390
+ EP +G+K N++
Sbjct: 1068 VFEP---NGAKWVNVS 1080
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 204/478 (42%), Gaps = 78/478 (16%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH--EIVSVTCGAD 81
I+ GA H + L S + +WG GQ G G + L +DG I + CG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS---FRIANLHQVDGDWPAIEKIACGQF 837
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
H +A+ S ++++GWG +G+LGHG N+S+ P + L +V QIACG +H + +
Sbjct: 838 H-SAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRAHTVVL 895
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS-----IKMVAAGAEHSVAVAED 194
T G V G GQ+G+ +D + +K+ AF + ++ +A HS+ + ED
Sbjct: 896 TDTGRVLVCGSGSYGQMGV---DDDI--KKVFAFTPLPLGPLRVRDIATHYYHSICITED 950
Query: 195 GELYGWGWG--------------RYGNL--------------GLGDRNDRLIPEKVATVD 226
++ WG R L G R + +P ++ D
Sbjct: 951 NRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPRED 1010
Query: 227 L-QRE-------KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA 278
L RE +V VACG H+ ++S G LY++G QLGHG+ + + P Q+
Sbjct: 1011 LGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFE 1070
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISCG 338
+ +S G HT+A T DG ++ WG N FGQ GV + S K Q G
Sbjct: 1071 PNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVTKKFFFQARDG 1130
Query: 339 WRHTLAVTERQNVFSWG-----RGTNGQLGHGESSDRNSPKIIEPLSL-DGSKGQNIASS 392
R V E Q V G R N E D+ +I++ L D + Q ++
Sbjct: 1131 RRFMPNVDESQFVQKPGLIPDVRVRNLNEDGNEGVDKE--EIVDRLKASDVNVVQAVSKH 1188
Query: 393 KYDPSSGKTWVSPSERYAVVPDDTVQGQTSVTGRGNGSE---------VSVPEGDVKR 441
Y P GK +++ D+ G+ + +G + V + GDVKR
Sbjct: 1189 LYSPIEGKC------NGSIIEDEPRNGKIQKQNKYDGEDGPLCTTTALVHLIAGDVKR 1240
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 166 VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATV 225
+P+ L+ + G + +A GAEH + ++ G+L WG R+G G+G + R+ + V
Sbjct: 767 LPRVLE-YPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRI--ANLHQV 822
Query: 226 DLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESF 283
D + +ACG H+ + S G L+++GW +GQLGHG + + LVP ++ L
Sbjct: 823 DGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CK 881
Query: 284 ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHC---SPVQV-KFPLDQISCGW 339
++QI+ G HT+ +T G++ G +GQ+GV D++ +P+ + + I+ +
Sbjct: 882 VTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHY 941
Query: 340 RHTLAVTERQNVFSWGRG 357
H++ +TE VF WGR
Sbjct: 942 YHSICITEDNRVFEWGRN 959
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
++ ++ G SHS + S + +WG+G D QLGHG+ +R+ P Q+ +G + V+V+ G
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGN 1083
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLG-----HGNSSDL 112
+HT A ++ V++WG DFG+ G +GNS+D+
Sbjct: 1084 NHTIASTDDG-SVFAWGKNDFGQCGVLTKKNGNSADV 1119
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 287 ISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK--FP-LDQISCGWRHTL 343
I+ G H + ++S G+L WG N+FGQ GVG + + QV +P +++I+CG H+
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKIACGQFHSA 840
Query: 344 AVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWV 403
+ +++++G G GQLGHG RN+ + P ++G + T +
Sbjct: 841 FICSDGSLWTFGWGVWGQLGHG---GRNNSNQLVPTRVNGLICK------------VTQI 885
Query: 404 SPSERYAVVPDDTVQGQTSVTGRGNGSEVSVPEGDVKRI 442
+ + VV DT G+ V G G+ ++ V + D+K++
Sbjct: 886 ACGRAHTVVLTDT--GRVLVCGSGSYGQMGV-DDDIKKV 921
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 173/378 (45%), Gaps = 59/378 (15%)
Query: 40 VCSWGRGEDGQLGHGDAE------DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQV 93
V +G G +LG G+ E RL+P + + D +V + G H+ A S +V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNP--ILSTDKVGVVDLAVGGMHSAALSHDG-RV 129
Query: 94 YSWGWGD---FGRL--------GHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAV 139
Y+WG D GRL G +DL P K AL LRV ++ C D+ A+
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 140 TVEGEVQSWG--RNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
T G +WG R +G LG ++ P +++ E I +A G +H +A+ G+
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTGK 246
Query: 197 LYGWGWGRYGNLGLGDRNDR----LIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLY 252
+Y WG G+ LG R L P+ +A + ++ V G H+ ++ + GR+Y
Sbjct: 247 VYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL-----KNIISVGAGSYHSFAIDNKGRVY 301
Query: 253 SYGWSKYGQLGHG--DFKDHLV---PCQLEALRESFISQISGGWRHTMAVTSDGKLYGWG 307
++G + Q G D ++ V P ++AL + I+GG HT+A+ DG++ WG
Sbjct: 302 AWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 308 WNKFGQVGVGDNV------------DHCSPVQVKFP----LDQISCGWRHTLAVTERQNV 351
+ Q+G+ DN ++ P + Q+ CG H LAVT V
Sbjct: 362 RDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKV 421
Query: 352 FSWGRGTNGQLGHGESSD 369
+SWG N ++G G++ +
Sbjct: 422 YSWGSAENYEVGQGDNDE 439
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 151/339 (44%), Gaps = 51/339 (15%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG---------HGDAEDRL----SPTQLS- 66
V+ ++ G HS AL V +WG +D LG +GD D +P+++
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 67 ALDGHEIVSVTCGADHTTAYSES-CMQVYSWGWGDF----GRLGHGNSSDLFTPLPIKAL 121
AL + V C + T A +++ C + WG F G LG+ +S T P + +
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGC----CFTWGTFRCSDGVLGYSDSQK-RTAEPTQ-M 223
Query: 122 HSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE----DSLVPQKLQAFEGVS 177
+ Q+A G H +A+T G+V +WG Q QLG E L PQ L +S
Sbjct: 224 RLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIIS 283
Query: 178 IKMVAAGAEHSVAVAEDGELYGWGWG--RYGNLGLGDRNDRLIPEKVATVD-LQREKMVM 234
V AG+ HS A+ G +Y WG R + + D + + K VD L+ +
Sbjct: 284 ---VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS 340
Query: 235 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-------FKDHL-------VPCQLEALR 280
+ G HT+++ GR+ ++G QLG D KD P + L
Sbjct: 341 ITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL- 399
Query: 281 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDN 319
+ + Q+ G H +AVTSDGK+Y WG + +VG GDN
Sbjct: 400 -TNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDN 437
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 40/254 (15%)
Query: 8 SEAASTTAAP----FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR---- 59
S++ TA P + ++ G H +AL + V +WG G+ QLG E R
Sbjct: 211 SDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG-----HGNSSDLFT 114
L+P L+ I+SV G+ H+ A ++ +VY+WG + G + +
Sbjct: 271 LTPQPLAL---KNIISVGAGSYHSFAI-DNKGRVYAWGLNITRQCGIEVEDEEEGAVITK 326
Query: 115 PLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFE 174
P + AL VK I G+ H LA+ +G V +WGR+ QLG+ D+ +P+ + E
Sbjct: 327 PTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI---PDNALPETVVKDE 383
Query: 175 G---------------VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
++ V G H++AV DG++Y WG +G GD ND
Sbjct: 384 KGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGD-ND---- 438
Query: 220 EKVATVDLQREKMV 233
E VA L R K +
Sbjct: 439 EDVAVPTLVRSKAI 452
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR------LSPTQLSALDGH 71
+ ++ + AG+ HS A+ + V +WG Q G + ED PT + AL+G+
Sbjct: 278 LKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI-EVEDEEEGAVITKPTLVDALEGY 336
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG--------------HGNSSDLFTPLP 117
+ S+T G HT A E +V +WG D +LG GN+ L TP
Sbjct: 337 NVKSITGGEHHTLALLEDG-RVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTI 395
Query: 118 IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQ--KLQAFE 174
I L + V Q+ CG H LAVT +G+V SWG +N ++G G ED VP + +A +
Sbjct: 396 IPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIK 453
Query: 175 GVSIKMVAAGAEHSV 189
V+I++ AG + S+
Sbjct: 454 EVAIRVAGAGGQFSI 468
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 36/303 (11%)
Query: 115 PLPIKALHSL-RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV--PQ--K 169
P P++ S R+ +I + L V V +G +LG+G E +V P+
Sbjct: 48 PKPVRVPGSAKRINKIPELPTERLNVYV------FGSGSMNELGMGEEEMDVVYRPRLNP 101
Query: 170 LQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL---------GDR--NDRL- 217
+ + + V + +A G HS A++ DG +Y WG LG GD+ ND L
Sbjct: 102 ILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLE 161
Query: 218 -IPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKY--GQLGHGDFKDHLV-P 273
P KV L ++ V C T +++ +G +++G + G LG+ D + P
Sbjct: 162 GTPSKVEGA-LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEP 220
Query: 274 CQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG----VGDNVDHCSPVQVK 329
Q+ R I Q++ G H +A+T+ GK+Y WG + Q+G + +P +
Sbjct: 221 TQM---RLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLA 277
Query: 330 FP-LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQN 388
+ + G H+ A+ + V++WG Q G + I +P +D +G N
Sbjct: 278 LKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYN 337
Query: 389 IAS 391
+ S
Sbjct: 338 VKS 340
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats.
Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 70/371 (18%)
Query: 71 HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALH---SLRVK 127
+IV ++ GA H++ ++ +Y++G G G+LGHGN +P ++ SLRV
Sbjct: 188 QKIVLISTGAIHSSFITDQG-NLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV 246
Query: 128 QIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT---TEDSLVPQKLQ------------- 171
IA G H LA+T+ G+V SWG N + QLGLG + +PQ +
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 172 ---------------------------AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+ I ++ G S + + G L+ +G G
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 205 YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 264
+G LGLG+++ + LQ ++ ++ G H++ +++ G ++S+G + GQLG
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI 426
Query: 265 GDFKD-HLVPCQLEALRESF--------ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 315
G F + +P Q++ + S I ++S G H++A++ + Y WG + +G +G
Sbjct: 427 GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Query: 316 VGDNV--DHCSPV----------QVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLG 363
+V D PV VKF +D +S G++H +A++ +++SWG +LG
Sbjct: 487 TSIDVQGDRNLPVLINSNSVVVDNVKF-ID-VSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Query: 364 HGESSDRNSPK 374
++ +PK
Sbjct: 545 FKSDENQLTPK 555
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 19/242 (7%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSVTC 78
++ +S G + S + ++ ++GRG+ G+LG G+ + +P + +L GH I+ ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS 399
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT-PLPIKALHS--------LRVKQI 129
G H+ + + V+S+G D G+LG G S+ T P I+ + + + ++
Sbjct: 400 GGGHSLVLTNKGL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLG--LGTTEDSLVPQKLQA----FEGVSIKMVAA 183
+ G H +A++ + +WGR+ G LG + D +P + + + V V++
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTI 243
G +H+VA++ DG LY WG LG ++L P+K ++ + K ++ CG TI
Sbjct: 519 GFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK-CFINSKDSKPLLFTCGEIITI 577
Query: 244 SV 245
V
Sbjct: 578 IV 579
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 56/214 (26%)
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRES---FIS 285
++K+V+++ G H+ ++ G LY++G G+LGHG+ + + P +E + +
Sbjct: 187 QQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV 246
Query: 286 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS---PVQVKFPLD--------- 333
I+ G +H++A+T GK+Y WG N Q+G+G+ P + F +
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 334 -----------------------------------QISCGWRHTLAVTERQNVFSWGRGT 358
++SCG + +T++ +F++GRG
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 359 NGQLGHGESS--DRNSPKIIEPLS----LDGSKG 386
+G+LG GE S +++PK+++ L +D S G
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSG 400
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 277 EALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF------ 330
E + I IS G H+ +T G LY +G G++G G+ + SP V+F
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPS 242
Query: 331 -PLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 365
+ I+ G +H+LA+T V+SWG + QLG G
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 18/291 (6%)
Query: 70 GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQI 129
G I V CG T ++ + + ++G G G LGHGN +D+ P ++AL + Q+
Sbjct: 396 GVTIKHVACGDLFTACLTDRGI-IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQV 454
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSV 189
ACG SH LA++ +GE+ +WGR G+LGLGT E PQ++ G + V G + S+
Sbjct: 455 ACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSM 514
Query: 190 AVAEDGELYGWGWGRYGNLGLG--DRNDRLIPEK----------VATVDLQREKMVMVAC 237
+ G + G R+ LGL ++ +P + + + L +E ++ V
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 297
G H+ ++++SG Y++G +++GQLG + PC+++ L + ++ G T+AV
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 298 TSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQV----KFPLDQISCGWRHTL 343
++G++Y WG G++G D + PVQ+ + + +SC +TL
Sbjct: 635 GAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTL 685
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 26/285 (9%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K +ACGD +T G + ++G NG LG G D P ++A G + VA GA
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISV 245
H +A++ DGEL+ WG G G LGLG R P++V Q + V+ CG ++ +
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVV--CGIDSSMIL 516
Query: 246 SSSGRLYSYGWSKYGQLG--HGDFKDHLVPCQL--EAL-----------RESFISQISGG 290
+S GR+ + G +++ +LG H + VP Q EAL +E + + G
Sbjct: 517 TSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLC-VDLG 575
Query: 291 WRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLAVT 346
H+ A+T+ G Y +G N+ GQ+G +P +V+ + ++CG T+AV
Sbjct: 576 TAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVG 635
Query: 347 ERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 391
V+SWG+GT G+LG D P+ P+ LD + + S
Sbjct: 636 AEGEVYSWGKGTRGRLGR-RDEDAGLPR---PVQLDETHPYMVTS 676
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 20/281 (7%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G + L I+ ++G G +G LGHG+ D PT + AL G+E+V V CGA H
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
A S ++++WG GD GRLG G P + +++ CG + +T G
Sbjct: 462 LALSTD-GELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPG 520
Query: 144 EVQSWGRNQNGQLGLG--TTEDSLVPQKLQAFEGVS-------------IKMVAAGAEHS 188
V + G N+ +LGL + ++ VP + Q E +S + V G HS
Sbjct: 521 RVLACGSNRFNKLGLDHLSLDEEPVPYQ-QVEEALSFTPLGSAPLDQEPLLCVDLGTAHS 579
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSS 248
A+ G+ Y +G ++G LG R P +V ++ + MV ACG T++V +
Sbjct: 580 AAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMV--ACGDAFTVAVGAE 637
Query: 249 GRLYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQIS 288
G +YS+G G+LG D L P QL+ ++ +S
Sbjct: 638 GEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVS 678
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 9 EAASTT---AAPF--RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPT 63
EA S T +AP P+L + G +HS A+ + ++G + GQLG +P
Sbjct: 552 EALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 64 QLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALH 122
++ L+G ++V V CG T A +VYSWG G GRLG + + L P+ + H
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAVGAE-GEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETH 670
Query: 123 SLRVKQIAC 131
V ++C
Sbjct: 671 PYMVTSVSC 679
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 42/233 (18%)
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
+Y WG G L L N ++V VA G V+ SGRL +
Sbjct: 320 VYAWGGGLSSPLRLPMLNT---------------EVVQVAAGRTQKAGVTRSGRLILWEA 364
Query: 257 SKYGQLGHGDFKDHLVPCQLEALRESFISQ------------ISGGWRHTMAVTSDGKLY 304
G G L+P +E + F+S+ ++ G T +T G +
Sbjct: 365 PPLGAGG-----GTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIM 419
Query: 305 GWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRHTLAVTERQNVFSWGRGTNG 360
+G G +G G+ D P V+ + + Q++CG H LA++ +F+WGRG G
Sbjct: 420 TFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGG 479
Query: 361 QLGHGESSDRNSPKIIEPLSLDGSKGQNIA----SSKYDPSSGKTWVSPSERY 409
+LG G N P+ + P++ G + Q + SS S G+ S R+
Sbjct: 480 RLGLGTRESHNCPQQV-PVA-PGQEAQRVVCGIDSSMILTSPGRVLACGSNRF 530
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
LR +Q+ G H L + G+V SWG ++GQLG GT E L P+ L+A +G+++ VAA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAA 217
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTI 243
G HSV V+E G++Y WGW G L L RN E VA RE + G
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVA-----REATGLNEDG----S 268
Query: 244 SVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKL 303
V +GR+ + + P L+ S ++S G RHT VT G+L
Sbjct: 269 QVKRTGRVEDGAPAPF-------IAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGEL 321
Query: 304 YGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ------ISCG-WRHTLAVTER 348
Y WGW K+GQ+G D P +V++ +D+ ++CG W + E+
Sbjct: 322 YTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEK 373
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 42/182 (23%)
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 297
G H + + ++G+++S+G ++GQLGHG + L P LEAL+ +++++ G H++ V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 298 TSDGKLYGWGWNKFGQVGV-----------------GDNVD------------------- 321
+ G +Y WGWN+ GQ+ + G N D
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFI 285
Query: 322 --HCSPVQVKFPLD----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKI 375
P + PL ++SCG RHT VT +++WG G GQLGH +++ + P+
Sbjct: 286 AVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRR 345
Query: 376 IE 377
+E
Sbjct: 346 VE 347
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSH 135
+ GA+H ++ QV+SWG G G+LGHG P ++AL L + ++A G H
Sbjct: 163 LELGAEHALLL-DAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWH 221
Query: 136 CLAVTVEGEVQSWGRNQNGQLGL-----------------------------GTTEDSL- 165
+ V+ G++ WG N++GQL L G ED
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAP 281
Query: 166 --------VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL 217
P L G V+ G+ H+ V GELY WGWG+YG LG D
Sbjct: 282 APFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD 341
Query: 218 IPEKVATVDLQREKMVMVACG-WRHTISVSSSGR 250
P +V ++ ++ V CG W + G+
Sbjct: 342 WPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 325 PVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
P+ + Q+ G H L + VFSWG G +GQLGHG P+++E L
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL 207
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 286 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRH 341
Q+ G H + + + G+++ WG + GQ+G G P ++ + +++ G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWH 221
Query: 342 TLAVTERQNVFSWGRGTNGQL 362
++ V+E +++ WG +GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 175/373 (46%), Gaps = 51/373 (13%)
Query: 34 LLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG-HEIVSVTCGADHTTAYSESCMQ 92
+L +VC G G+ GQLG G ED L +LS + G + V ++ G H ++S
Sbjct: 40 VLGNVLVC--GNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSG-D 94
Query: 93 VYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQ 146
+YS+G D G LG S D LP KAL I+ GDSH + +G V
Sbjct: 95 IYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC------ISAGDSHSACLLEDGRVF 148
Query: 147 SWG--RNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+WG R+ +G +GL + P L EG +A+GA+H V + G+++ G
Sbjct: 149 AWGSFRDSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAE 206
Query: 205 YGNLG-LGDRN----------DRLIPEKVATVDLQREKMVMV--ACGWRHTISVSSSGRL 251
G LG L +R+ D L P ++ + R K A + + S + +
Sbjct: 207 QGQLGRLSERSISGEGRRGKRDLLRPTQLI---ITRAKPFEAIWATNYCTFMRESQTQVI 263
Query: 252 YSYGWSKYGQLGH----GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWG 307
++ G + + QL H +F L P + E L++ I I+GG HT+ +T+D K G
Sbjct: 264 WATGLNNFKQLAHETKGKEFA--LTPIKTE-LKD--IRHIAGGQHHTVILTTDLKCSVVG 318
Query: 308 WNKFGQVGVGDNVDHC-SPVQVKFPLDQI---SCGWRHTLAVTERQNVFSWGRGTNGQLG 363
++G++G+GD D P VK ++I CG + AVT ++SWG G N QLG
Sbjct: 319 RPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLG 378
Query: 364 HGESSDRNSPKII 376
G+ D P ++
Sbjct: 379 VGDGDDELEPIVV 391
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGH-------GD----AEDRLSPTQLSALDGHE 72
I++GA H V L + V + G E GQLG G+ D L PTQL
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 73 IVSVTCGADHTTAYSESCMQV-YSWGWGDFGRLGHGNSSDLFTPLPIKA-LHSLRVKQIA 130
++ ++ T ES QV ++ G +F +L H F PIK L +R IA
Sbjct: 243 FEAI-WATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIR--HIA 299
Query: 131 CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH--S 188
G H + +T + + GR + G+LGLG +D V +K + ++ K+V+ G S
Sbjct: 300 GGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKD--VVEKPTIVKKLTEKIVSVGCGEVCS 357
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTI 243
AV DG+LY WG G LG+GD +D L P V + + Q + M++ + G +H I
Sbjct: 358 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAI 412
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 116/270 (42%), Gaps = 28/270 (10%)
Query: 22 LLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGAD 81
L ISAG SHS LL V +WG D G D T + ++G S+ GAD
Sbjct: 129 LCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD 188
Query: 82 HTTAYSESCMQVYSWG---WGDFGRL--------GHGNSSDLFTPLPIKALHSLRVKQIA 130
H + + +V++ G G GRL G DL P L R K
Sbjct: 189 HLVILT-TAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT---QLIITRAKPFE 244
Query: 131 C--GDSHCLAVTVEGEVQ---SWGRNQNGQLGLGT--TEDSLVPQKLQAFEGVSIKMVAA 183
++C + E + Q + G N QL T E +L P K + + I+ +A
Sbjct: 245 AIWATNYCTFMR-ESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD---IRHIAG 300
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTI 243
G H+V + D + G YG LGLGD D + EK V EK+V V CG +
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKD--VVEKPTIVKKLTEKIVSVGCGEVCSY 358
Query: 244 SVSSSGRLYSYGWSKYGQLGHGDFKDHLVP 273
+V+ G+LYS+G QLG GD D L P
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 138/329 (41%), Gaps = 40/329 (12%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED-RLSPTQLSALDGHEIVSVTCGADH 82
ISAG H++ L + S+G ++G LG +ED S L L G + ++ G H
Sbjct: 79 ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC-ISAGDSH 137
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
+ E + WG F R HGN + D PI + IA G H + +
Sbjct: 138 SACLLEDG---RVFAWGSF-RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVIL 193
Query: 140 TVEGEVQSWGRNQNGQLGLGT-----------TEDSLVPQKL-----QAFEGV-SIKMVA 182
T G+V + G + GQLG + D L P +L + FE + +
Sbjct: 194 TTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCT 253
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR--LIPEKVATVDLQREKMVMVACGWR 240
E V ++ G + L + L P K D++ +A G
Sbjct: 254 FMRESQTQV-----IWATGLNNFKQLAHETKGKEFALTPIKTELKDIRH-----IAGGQH 303
Query: 241 HTISVSSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTS 299
HT+ +++ + G +YG+LG GD KD + P ++ L E +S + G + AVT
Sbjct: 304 HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTI 362
Query: 300 DGKLYGWGWNKFGQVGVGDNVDHCSPVQV 328
DGKLY WG Q+GVGD D P+ V
Sbjct: 363 DGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGASHSVALLSGN-----------IVCSWGRGEDG 49
++E S + E RP LI A A+ + N ++ + G
Sbjct: 213 LSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFK 272
Query: 50 QLGHGDA--EDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG 107
QL H E L+P + D I G H T + ++ G ++GRLG G
Sbjct: 273 QLAHETKGKEFALTPIKTELKDIRHIA----GGQHHTVILTTDLKCSVVGRPEYGRLGLG 328
Query: 108 NSSDLF-TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV 166
+ D+ P +K L + ++ + CG+ AVT++G++ SWG N QLG+G +D L
Sbjct: 329 DVKDVVEKPTIVKKL-TEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELE 387
Query: 167 PQKL--QAFEGVSIKMVAAGAEHSVAVAE 193
P + + +G + + + G +H++ + +
Sbjct: 388 PIVVVSKNTQGKHMLLASGGGQHAIFLVK 416
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKM-VAAGAEHSVAVAEDGELY 198
TV G V G GQLGLG ED L ++L G+ + ++AG H++ + + G++Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSK 258
+G G LG D ++ K +DL K + ++ G H+ + GR++++G +
Sbjct: 97 SFGCNDEGALGR-DTSEDGSESKPDLIDLP-GKALCISAGDSHSACLLEDGRVFAWGSFR 154
Query: 259 --YGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 315
+G +G + P L + + I+ G H + +T+ GK++ G + GQ+G
Sbjct: 155 DSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 27/233 (11%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
LRV+Q+ G H L + G+V SWG ++GQLG GT E L P+ L+A +G+ + VAA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRN-DRLIPEKVATVDLQREKMVMVACGWRHT 242
G HSV ++E G++Y WGW G L L R+ E+ +L + G +
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNED-------GLKEE 273
Query: 243 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 302
++V+ +G + P L+ S S G RHT VT G+
Sbjct: 274 LAVADAGAPAHF------------IAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 303 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ------ISCG-WRHTLAVTER 348
LY WGW K+GQ+G D+ P V++ +++ ++CG W + ER
Sbjct: 322 LYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMER 374
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG 132
+ + GA+H + QV+SWG G G+LGHG P ++AL LR+ ++A G
Sbjct: 163 VRQLELGAEHVLLLC-AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGT----------------TEDSL----------- 165
H + ++ G++ WG N++GQL L T ED L
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGA 281
Query: 166 ---------VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR 216
P L G M + G+ H+ V GELY WGWG+YG LG D
Sbjct: 282 PAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL 341
Query: 217 LIPEKVATVDLQREKMVMVACG 238
P V ++ ++ V CG
Sbjct: 342 DRPCCVEYFVERQLEVRAVTCG 363
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 41/202 (20%)
Query: 217 LIPEKVATVDLQREKMV-MVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQ 275
+ PE L E V + G H + + ++G+++S+G ++GQLGHG + L P
Sbjct: 147 VTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRL 206
Query: 276 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD----------------N 319
LEAL+ +++++ G H++ ++ G +Y WGWN+ GQ+ + N
Sbjct: 207 LEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELN 266
Query: 320 VDHCS--------------------PVQVKFPL--DQI--SCGWRHTLAVTERQNVFSWG 355
D P + PL D + SCG RHT VT +++WG
Sbjct: 267 EDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWG 326
Query: 356 RGTNGQLGHGESSDRNSPKIIE 377
G GQLGH +S+ + P +E
Sbjct: 327 WGKYGQLGHKDSTSLDRPCCVE 348
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 69/178 (38%), Gaps = 37/178 (20%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS 75
AP V + GA H + L + V SWG G GQLGHG E L P L AL G +
Sbjct: 158 APELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLG------------------------------ 105
V G H+ SE+ +Y WGW + G+L
Sbjct: 218 VAAGGWHSVCLSET-GDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAV 276
Query: 106 --HGNSSDLFTPLPIKALHSLRVKQIA----CGDSHCLAVTVEGEVQSWGRNQNGQLG 157
G + P AL L + A CG H VT GE+ +WG + GQLG
Sbjct: 277 ADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 323 CSPVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
C P+ + + Q+ G H L + VFSWG G +GQLGHG P+++E L
Sbjct: 154 CQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEAL 210
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 1 MAEASAASEAASTTAAPFRPVL---------LISAGASHSVALLSGNIVCSWGRGEDGQL 51
+A A A + A PF +L + S G+ H+ + + +WG G+ GQL
Sbjct: 274 LAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Query: 52 GHGDAE--DRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
GH D+ DR + E+ +VTCG +T Y+
Sbjct: 334 GHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 151/348 (43%), Gaps = 38/348 (10%)
Query: 59 RLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG--DFGRLGHGNSSDLFT-- 114
R+ P H+I S CG T S++ WG G +LG S T
Sbjct: 92 RIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRG 151
Query: 115 ----------PLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDS 164
PLP+ +V Q++CG +H L +T V S G N +GQ G ED
Sbjct: 152 YEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDE 211
Query: 165 LVPQ-----KLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
+ + ++Q F+G +++V G +HS+ + + GE+Y GWG G GLG N P
Sbjct: 212 VYSESHKVHRMQDFDGQVVQVV-CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP 270
Query: 220 EKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH-GDFKDHLVPCQLEA 278
K+ DL +V VA +++S+ G ++ +G S+Y QL D VP L
Sbjct: 271 SKLGG-DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPF 329
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP------- 331
+ Q++ G + ++G ++ WG +G +G G + + ++ P
Sbjct: 330 SGVGKVKQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTE 386
Query: 332 ------LDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 373
+ QI CG H A+T + +F WG+ G LG G D+ P
Sbjct: 387 FNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 434
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 45/370 (12%)
Query: 16 APFRPVL---LISAGASHSVALLSG---NIVCSWGRG--EDGQLG-HGDAEDRLS----- 61
P+R L + SA + LLS ++ WG G +D QLG H +D+
Sbjct: 96 VPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 62 ------PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTP 115
P L +++ V+CG H+ ++ V+S G G+ G D
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDR-EGVFSMGNNSHGQCGRKVVEDEVYS 214
Query: 116 LPIKALHSLR-----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL 170
K +H ++ V Q+ CG H L +T +GEV S G +GQ GLG + P KL
Sbjct: 215 ESHK-VHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKL 273
Query: 171 QA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG-LGDRNDRLIPEKVATVDLQ 228
GV++ VA + +A++ DG ++GWG Y L + D +P + +
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 333
Query: 229 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-----FKDHLVPCQLEALRESF 283
+ K V ACG +++ G ++ +G YG LG G ++P L L E
Sbjct: 334 KVKQV--ACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFN 388
Query: 284 ----ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLD--QISC 337
+SQI G H A+T+ G+L+ WG N G +G+G D P +V P + ++C
Sbjct: 389 PEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVAC 448
Query: 338 GWRHTLAVTE 347
G H + + +
Sbjct: 449 GVDHMVTLAK 458
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
I G SH AL + + WG+ G LG G ED+ P +++ + G E V V CG DH
Sbjct: 396 IRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPG-EPVDVACGVDHM 453
Query: 84 TAYSESCM 91
++S +
Sbjct: 454 VTLAKSFI 461
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 91/190 (47%), Gaps = 36/190 (18%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
LR +Q+ G H L + G+V SWG ++GQLG GT E L P+ L+A +G+ + VAA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVA-------------------- 223
G HSV V+E G++Y WGW G L L RN E VA
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAE 277
Query: 224 ---------------TVDLQR-EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 267
+DL V +CG RHT V+ +G LY++GW KYGQLGH D
Sbjct: 278 DGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDT 337
Query: 268 KDHLVPCQLE 277
P ++E
Sbjct: 338 TSLDRPRRVE 347
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 42/182 (23%)
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 297
G H + + ++G+++S+G ++GQLGHG + L P LEAL+ +++++ G H++ V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 298 TSDGKLYGWGWNKFGQVGV--------GDNVDHCS------------------------- 324
+ G +Y WGWN+ GQ+ + G+ V +
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFI 285
Query: 325 -----PVQVKFPLD----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKI 375
P + P+ + SCG RHT VT +++WG G GQLGH +++ + P+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRR 345
Query: 376 IE 377
+E
Sbjct: 346 VE 347
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 51/257 (19%)
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVA----AGAEHSVAVAEDGE 196
EGE G Q G+L L + V + + ++ ++ A GAEH++ + G+
Sbjct: 119 AEGEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQ 178
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGW 256
++ WG GR+G LG G L P + LQ M VA G H++ VS +G +Y +GW
Sbjct: 179 VFSWGGGRHGQLGHGTLEAELEPRLLEA--LQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 257 SKYGQLG-----------------------------HGDFKD---------HLVPCQLEA 278
++ GQL G +D P L+
Sbjct: 237 NESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDL 296
Query: 279 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ---- 334
S + S G RHT VT G+LY WGW K+GQ+G D P +V++ +D+
Sbjct: 297 PMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQV 356
Query: 335 --ISCG-WRHTLAVTER 348
++CG W + E+
Sbjct: 357 KAVTCGPWNTYVYAVEK 373
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 40/214 (18%)
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSH 135
+ GA+H ++ QV+SWG G G+LGHG P ++AL L + ++A G H
Sbjct: 163 LELGAEHALLL-DAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGT-----------------TED-SLVPQKLQAFEGVS 177
+ V+ G++ WG N++GQL L T ED S V + A +G
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAP 281
Query: 178 IKMVAA--------------------GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL 217
+A G+ H+ V GELY WGWG+YG LG D
Sbjct: 282 APFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD 341
Query: 218 IPEKVATVDLQREKMVMVACG-WRHTISVSSSGR 250
P +V ++ ++ V CG W + G+
Sbjct: 342 RPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 44/211 (20%)
Query: 17 PFRPVLL---ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI 73
P P L + GA H++ L + V SWG G GQLGHG E L P L AL G +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLG---------------------------- 105
V G H+ SE+ +Y WGW + G+L
Sbjct: 213 AEVAAGGWHSVCVSETG-DIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Query: 106 ------HGNSSDLFTPLPIKALHSLRVK----QIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
G + P AL L + + +CG H VT GE+ +WG + GQ
Sbjct: 272 RTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ 331
Query: 156 LGLGTTEDSLVPQKLQAF--EGVSIKMVAAG 184
LG T P++++ F + + +K V G
Sbjct: 332 LGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 121
P L G + V +CG+ HT + + ++Y+WGWG +G+LGH +++ L P ++
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Query: 122 --HSLRVKQIACGDSHCLAVTVE 142
L+VK + CG + VE
Sbjct: 350 VDKQLQVKAVTCGPWNTYVYAVE 372
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 325 PVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 379
P+ + Q+ G H L + VFSWG G +GQLGHG P+++E L
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL 207
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 286 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVK----FPLDQISCGWRH 341
Q+ G H + + + G+++ WG + GQ+G G P ++ + +++ G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 342 TLAVTERQNVFSWGRGTNGQL 362
++ V+E +++ WG +GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 33/283 (11%)
Query: 21 VLLISAGASHSVALLSGNIVCSWG--RGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSV 76
V+ ++A + S AL S V +WG R +G LG + ++ +P ++ + IV +
Sbjct: 167 VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQL 226
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL----FTPLPIKALHSLRVKQIACG 132
G DH E M V++WG G +LG P P H VK IA G
Sbjct: 227 APGKDHILFLDEEGM-VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRH---VKYIASG 282
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGT-TED-SLV--PQKLQAFEGVSIKMVAAGAEHS 188
++HC A+T + ++ SWG NQ GQ G+ ED +LV P++L + V I+ +AAG HS
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE--------KVATVDLQRE-----KMVMV 235
+ +++DG+LY G +G+ N +PE K V L + K V
Sbjct: 343 LILSQDGDLYSCGRLDMFEVGIPKDN---LPEYTYKDVHGKARAVPLPTKLNNVPKFKSV 399
Query: 236 ACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLE 277
A G H+++V+ +G YS+G+ + +G G F+D VP +++
Sbjct: 400 AAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIK 442
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 53 HGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG---NS 109
+GDA ++S I++ H S + ++ WG G LG G +
Sbjct: 9 NGDASGAHRAKKMSKTHASHIINAQEDYKHMY-LSVQPLDIFCWGTGSMCELGLGPLAKN 67
Query: 110 SDLFTPL--PIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT------ 161
++ P P ++ A G H LA+ E V SWG N G LG T+
Sbjct: 68 KEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQL 127
Query: 162 -----------------EDSLVPQKL--QAF----EGVSIKMVAAGAEHSVAVAEDGELY 198
E P K+ ++F EG + +AA S A+ +GE+Y
Sbjct: 128 KDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVY 187
Query: 199 GWGWGRYGNLGLGDRNDRL----IPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSY 254
WG R LG D++ P KV T + +V +A G H + + G ++++
Sbjct: 188 AWGTFRCNEGILGFYQDKIKIQKTPWKVPT--FSKYNIVQLAPGKDHILFLDEEGMVFAW 245
Query: 255 GWSKYGQLGHG---DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKF 311
G + QLG F+ + + LR + I+ G H A+T D KL WG N+F
Sbjct: 246 GNGQQNQLGRKVMERFRLKTLDPRPFGLRH--VKYIASGENHCFALTKDNKLVSWGLNQF 303
Query: 312 GQVGVGDNVDH----CSPVQVKFP----LDQISCGWRHTLAVTERQNVFSWGR 356
GQ GV ++V+ P ++ P + I+ G H+L +++ +++S GR
Sbjct: 304 GQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGR 356
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 59/369 (15%)
Query: 17 PFRP-----VLLISAGASHSVALLSGNIVCSWGRGEDGQLGH--GDAEDRL--------- 60
PF P ++ + G H++AL + V SWG + G LG +A+++L
Sbjct: 77 PFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSS 136
Query: 61 ------------SPTQLS------ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG--D 100
+P ++ +GH++V + D+ + S +VY+WG +
Sbjct: 137 DDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLA-ATDNMSCALFSNGEVYAWGTFRCN 195
Query: 101 FGRLGHGNSSDLF--TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGL 158
G LG TP + + Q+A G H L + EG V +WG Q QLG
Sbjct: 196 EGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR 255
Query: 159 GTTED-SLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRNDR 216
E L + F +K +A+G H A+ +D +L WG ++G G+ D D
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDG 315
Query: 217 LIPEKVATVDLQREKMVM-VACGWRHTISVSSSGRLYSYGWSKYGQLG------------ 263
+ K + L ++ +A G H++ +S G LYS G ++G
Sbjct: 316 ALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYK 375
Query: 264 --HGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 321
HG + +P +L + + ++ G H++AV +G Y WG+ + VG+G D
Sbjct: 376 DVHGKARAVPLPTKLNNVPK--FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFED 433
Query: 322 HCS-PVQVK 329
P ++K
Sbjct: 434 DTEVPTRIK 442
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 23/244 (9%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED-RLSPTQLSALDGHEIVSVTCG 79
++ ++ G H + L +V +WG G+ QLG E RL + + G
Sbjct: 223 IVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASG 282
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD----LFTPLPIKALHSLRVKQIACGDSH 135
+H A ++ ++ SWG FG+ G + + P + ++ ++ IA G+ H
Sbjct: 283 ENHCFALTKD-NKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHH 341
Query: 136 CLAVTVEGEVQSWGRNQNGQLGL--------------GTTEDSLVPQKLQAFEGVSIKMV 181
L ++ +G++ S GR ++G+ G +P KL K V
Sbjct: 342 SLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP--KFKSV 399
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATVDLQREKMVMVACGWR 240
AAG+ HSVAVA++G Y WG+G +GLG +D +P ++ Q +++V CG +
Sbjct: 400 AAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQ 459
Query: 241 HTIS 244
++S
Sbjct: 460 FSVS 463
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 55/265 (20%)
Query: 179 KMVAAGAEHSVAVAEDG----------ELYGWGWGRYGNLGLGD--RNDRLI-PEKVATV 225
KM A H + ED +++ WG G LGLG +N + P +
Sbjct: 20 KMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFL 79
Query: 226 DLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH--GDFKDHL------------ 271
K++ A G HT+++ ++S+G + G LG + K+ L
Sbjct: 80 PRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDE 139
Query: 272 ---------VPCQLEALRESF--------ISQISGGWRHTMAVTSDGKLYGWGWNKFGQV 314
P ++ RESF + Q++ + A+ S+G++Y WG + +
Sbjct: 140 DGDLNELESTPAKIP--RESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEG 197
Query: 315 GVGDNVDHCS--------PVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE 366
+G D P K+ + Q++ G H L + E VF+WG G QLG +
Sbjct: 198 ILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR-K 256
Query: 367 SSDRNSPKIIEPLSLDGSKGQNIAS 391
+R K ++P + IAS
Sbjct: 257 VMERFRLKTLDPRPFGLRHVKYIAS 281
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 71 HEIVSVTCGADHTTAYSESCMQVYSWGWG--DFGRLG-HGNSSD-------LFTP----L 116
+I S CG T S++ WG G +LG H + D + P L
Sbjct: 107 QKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 117 PIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ-----KLQ 171
P+ RV Q++CG +H L +T V S G N GQ G E+ + + ++Q
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREK 231
F+G + VA G +HS+ + + GE+Y GWG G GLG N P K+ DL
Sbjct: 227 DFDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGG-DLAGVN 284
Query: 232 MVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH-GDFKDHLVPCQLEALRESFISQISGG 290
++ VA ++VS+ G L+ +G S+Y QL D VP L + Q + G
Sbjct: 285 VIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Query: 291 WRHTMAVTSDGKLYGWGWNKFGQVGVGDN-VDHCSPVQV------------KFPLDQISC 337
+ +G ++ WG +G +G G N V+ P + + + +I C
Sbjct: 345 GTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRC 401
Query: 338 GWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 373
G H A+T + +F WG+ G LG G D+ P
Sbjct: 402 GLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 171/371 (46%), Gaps = 47/371 (12%)
Query: 16 APFRPVL---LISAGASHSVALLS---GNIVCSWGRG--EDGQLG-HGDAEDR------- 59
P+R L + SA + LLS ++ WG G +D QLG H +D+
Sbjct: 99 VPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 158
Query: 60 LSPTQLS-ALDGHE---IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN-SSDLFT 114
L P+ +S LD + ++ V+CG H+ ++ V+S G +G+ G +++++
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR-EGVFSMGNNSYGQCGRKVVENEIYS 217
Query: 115 PLPIKALHSLR-----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
+H ++ V Q+ACG H L +T +GEV S G +GQ GLG + P K
Sbjct: 218 E--SHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTK 275
Query: 170 LQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG-LGDRNDRLIPEKVATVDL 227
L GV++ VA + +AV+ DG L+GWG Y L + D +P + +
Sbjct: 276 LGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGV 335
Query: 228 QREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-----DFKDHLVPCQLEALRES 282
K+ ACG ++ G ++ +G YG LG G ++P L L E
Sbjct: 336 G--KVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEF 390
Query: 283 F----ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLD--QIS 336
+S+I G H A+T+ G+L+ WG N G +G+G D P +V P + ++
Sbjct: 391 NPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVA 450
Query: 337 CGWRHTLAVTE 347
CG H + + +
Sbjct: 451 CGVDHMVTLAK 461
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCG 79
V+ ++ G HS+ L V S G G DGQ G G SPT+L L G ++ V
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQV--- 288
Query: 80 ADHTTAYSESCMQVYS----WGWGDFGRLGHGNSSDLFTPLPIKALHSL---RVKQIACG 132
Y + C+ V + +GWG+ L + +D + LH +V+Q ACG
Sbjct: 289 ----ATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQK-------LQAFEG-VSIKMVAA 183
+ C + EG V WG G LG G +S VP+ L F + + +
Sbjct: 345 GTGCAVLNGEGHVFVWGY---GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRC 401
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTI 243
G H A+ GEL+ WG G LG+G D+ P +V + V VACG H +
Sbjct: 402 GLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPG----EPVDVACGVDHMV 457
Query: 244 SVSSS 248
+++ S
Sbjct: 458 TLAKS 462
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 272 VPCQLEALRESFISQISGGWRHTM--AVTSD-GKLYGWGWNKFGQVGVGDNVDH------ 322
VP +LE ++ IS + G+ T+ + T+D K++G G NK Q+G +
Sbjct: 99 VPYRLELDQK--ISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 323 --CSPVQVKFPLD--------QISCGWRHTLAVTERQNVFSWGRGTNGQLGH 364
P V PLD Q+SCG H+L +T+R+ VFS G + GQ G
Sbjct: 157 YVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGR 208
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 28/294 (9%)
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALHSLRVKQIACGDSHCL 137
G +H+ A +E+ ++Y WG +L + + + P+ I+ + + RVK I+CG +
Sbjct: 42 GYNHSLALTETG-ELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSA 100
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVA----- 192
A+ G + WG G G +S P K+ +GV+ V+ G H VA
Sbjct: 101 AIMENGLLYVWGTLIEG----GKCTES--PTKVDLLKGVT--CVSIGINHCAVVADSPTT 152
Query: 193 -EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRL 251
E +Y WG R G LG+ + P +V K + V CG T ++ +
Sbjct: 153 PEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTL----GSKAISVCCGEEFTAAIVEGNEV 208
Query: 252 YSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKF 311
+ +G++K Q+ + D ++ ++ I ++S + A + G + WG N+
Sbjct: 209 FVWGYNKSRQICSNN-SDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNE- 266
Query: 312 GQV-GVGDNVDHCSPVQVKFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQLGH 364
QV +GD+ P ++K QIS H L ++E+ +FSWG + QL H
Sbjct: 267 -QVCRIGDDKFINFPNKIK----QISASTSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 33/303 (10%)
Query: 14 TAAPFRP-VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGH 71
T P P + + G +HS+AL + WG QL A + P ++ +
Sbjct: 28 TFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQ 87
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC 131
+ S++CG + + A E+ + +Y WG G G ++ +P + L V ++
Sbjct: 88 RVKSISCGGNFSAAIMENGL-LYVWGTLIEG----GKCTE--SPTKVDLLKG--VTCVSI 138
Query: 132 GDSHCLAV-----TVEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
G +HC V T E V +WG N+ GQLG+ + P+++ G V G
Sbjct: 139 GINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTL--GSKAISVCCGE 196
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISV 245
E + A+ E E++ WG+ + + + +D +I V L R+ +V ++C + +
Sbjct: 197 EFTAAIVEGNEVFVWGYNKSRQIC-SNNSDEIISIPVKPF-LGRD-IVELSCTKNYIAAR 253
Query: 246 SSSGRLYSYGWS-KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLY 304
S G + +G + + ++G F + P + I QIS H + ++ G+++
Sbjct: 254 SGVGNVCVWGSNEQVCRIGDDKFINF--PNK--------IKQISASTSHILVLSEKGEIF 303
Query: 305 GWG 307
WG
Sbjct: 304 SWG 306
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 36/239 (15%)
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+G + WG +G+ T + L+P +I + G HS+A+ E GELYGWG
Sbjct: 13 QGVLYCWGDKFSGK----PTFNPLIP---------NICFMDNGYNHSLALTETGELYGWG 59
Query: 202 WGRYGNLGLGDRNDRL-IPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYG 260
R+ L + P K+ + QR K ++CG + ++ +G LY +G G
Sbjct: 60 DNRHHQLSSNKAITSIDKPIKIQVIPNQRVK--SISCGGNFSAAIMENGLLYVWGTLIEG 117
Query: 261 QLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG-------KLYGWGWNKFGQ 313
G + P +++ L+ ++ +S G H AV +D +Y WG N+ GQ
Sbjct: 118 ----GKCTES--PTKVDLLKG--VTCVSIGINHC-AVVADSPTTPEKRSVYTWGTNRKGQ 168
Query: 314 VG-VGDNVDHCSPVQVKFPLDQIS--CGWRHTLAVTERQNVFSWGRGTNGQLGHGESSD 369
+G VGD++ + +P +V IS CG T A+ E VF WG + Q+ S +
Sbjct: 169 LGVVGDSITN-APRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDE 226
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 12 STTAAPFRPVL-----LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
S T AP R L + G + A++ GN V WG + Q+ ++++ +S +
Sbjct: 175 SITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDEIIS-IPVK 233
Query: 67 ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGD-FGRLGHGNSSDLFTPLPIKALHSLR 125
G +IV ++C ++ A S V WG + R+G D F P K
Sbjct: 234 PFLGRDIVELSCTKNYIAARS-GVGNVCVWGSNEQVCRIG----DDKFINFPNK------ 282
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG 157
+KQI+ SH L ++ +GE+ SWG +++ QL
Sbjct: 283 IKQISASTSHILVLSEKGEIFSWGNSEDNQLS 314
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 238 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMA 296
G+ H+++++ +G LY +G +++ QL + P +++ + + IS G + A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 297 VTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQISCGWRHTLAVT------ERQN 350
+ +G LY WG + G + + V + + +S G H V E+++
Sbjct: 102 IMENGLLYVWG----TLIEGGKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRS 157
Query: 351 VFSWGRGTNGQLGHGESSDRNSPK 374
V++WG GQLG S N+P+
Sbjct: 158 VYTWGTNRKGQLGVVGDSITNAPR 181
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 41/213 (19%)
Query: 219 PEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH-------------- 264
P+ + + + ++V V+CG RH+I++SS +Y +G +K+GQL +
Sbjct: 220 PKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNN 279
Query: 265 --GDFKDHLV---PCQLEALRESFISQISGGWRHTMAVTSDGK-LYGWGWNKFGQVGVGD 318
D D +V P + E I QIS G++HT+ + + K + +G NKFGQ+G G+
Sbjct: 280 NINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGN 339
Query: 319 NVDHCSPVQV----------------KFPLDQISCGWRHTLAVTERQNVFSWGRGTNGQL 362
+D +P + + +I CGW ++ +T + ++ GRG G L
Sbjct: 340 FIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGIL 399
Query: 363 GHG-----ESSDRNSPKIIEPLSLDGSKGQNIA 390
G ++S+ N K++ S + +K +N +
Sbjct: 400 GDNRDLSLDNSNSNQFKLLNSESFNENKIKNFS 432
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 32/176 (18%)
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNL-GLGDRN---------------DRLIP 219
+ I V+ G HS+A++ + ++YGWG ++G L L D N D ++
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQ 290
Query: 220 EKVATVDLQRE-KMVMVACGWRHTISVSSSGR-LYSYGWSKYGQLGHGDFKDHLVPCQLE 277
+ ++ + E K++ ++CG++HT+ + + + + S+G +K+GQLG+G+F D PC ++
Sbjct: 291 DSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVID 350
Query: 278 ------------ALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 321
+L + I +I GW ++ +T+ KLY G ++G +GDN D
Sbjct: 351 ISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGI--LGDNRD 404
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 55/268 (20%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------------GDAEDRL---S 61
++ +S G HS+AL S N V WG + GQL + D D + S
Sbjct: 233 IVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQDS 292
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPI--- 118
P ++ + +I+ ++CG HT + V S+G FG+LG+GN D P I
Sbjct: 293 PKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVIDIS 352
Query: 119 ---------KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG----LGTTEDSL 165
K+L+ +++K+I CG S+ +T + ++ GR + G LG L +
Sbjct: 353 SFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNSNS 412
Query: 166 VPQKL---QAFEGVSIKMVAAGAEHSV----------AVAEDGELYGWGWGRYGNLGL-- 210
KL ++F IK + G+EH + + +Y +GW + LGL
Sbjct: 413 NQFKLLNSESFNENKIKNFSIGSEHILIQVYSNDNNNNNNNNNNIYSFGWNEHYQLGLCE 472
Query: 211 -----GDRNDRLIPEKVATVDLQREKMV 233
D +++ P+ + ++ + +V
Sbjct: 473 PIIIGKDGDNKSFPQLLPSIKGNDKSLV 500
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 33/152 (21%)
Query: 91 MQVYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGE 144
M++YSWG G+ G+LG GN+ D L P K + + V I G H + + G+
Sbjct: 1 MKIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEI-VNDIVGGGCHSMMIIDNGD 59
Query: 145 VQSWGRNQNGQLGLGTTEDS------------------------LVPQKLQAFE--GVSI 178
+ ++G N +GQLG+ + E +P L F+ + I
Sbjct: 60 LYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKI 119
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL 210
K + G HS+A +G +Y WG +G LG+
Sbjct: 120 KNCSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 196 ELYGWGWGRYGNLGLGDRNDRL-IPEKVATVDLQREKMVM--VACGWRHTISVSSSGRLY 252
++Y WG G G LG+G+ +D + P V D +++ ++ + G H++ + +G LY
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 253 SYGWSKYGQLGHGDFKD------------------------HLVPCQLEALRESFIS--Q 286
++G + GQLG + +P L + + I
Sbjct: 62 TFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKN 121
Query: 287 ISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 316
SGGW H++A ++G +Y WG N GQ+G+
Sbjct: 122 CSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 33/151 (21%)
Query: 144 EVQSWGRNQNGQLGLGTTEDS-------LVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
++ SWG GQLG+G T+DS L P + +E V+ + G HS+ + ++G+
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVN--DIVGGGCHSMMIIDNGD 59
Query: 197 LYGWGWGRYGNLGLGDRND------------------------RLIPEKVATVDLQREKM 232
LY +G G LG+ + IP + + K+
Sbjct: 60 LYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKI 119
Query: 233 VMVACGWRHTISVSSSGRLYSYGWSKYGQLG 263
+ GW H+++ ++G +YS+G + +GQLG
Sbjct: 120 KNCSGGWAHSLACDNNGNIYSWGSNSHGQLG 150
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 35/158 (22%)
Query: 250 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRE-----SFISQISGGWRHTMAVTSDGKLY 304
++YS+G GQLG G+ D + L + ++ I GG H+M + +G LY
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 305 GWGWNKFGQVGVGDN-------------------------VDHCSPVQVKFPLDQI---- 335
+G N GQ+G+ N + F ++ I
Sbjct: 62 TFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKN 121
Query: 336 -SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 372
S GW H+LA N++SWG ++GQLG + NS
Sbjct: 122 CSGGWAHSLACDNNGNIYSWGSNSHGQLGIDTTCSLNS 159
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLS-PTQLSALDG---HEIVSVTCGADHTTAYSESCMQVYS 95
+ SWG G GQLG G+ +D +S PT + DG +EIV+ G + +Y+
Sbjct: 3 IYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLYT 62
Query: 96 WGWGDFGRLGHGNSSD--------------------------LFTPLPIKALHSLRVKQI 129
+G D G+LG ++ + T L ++S+++K
Sbjct: 63 FGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKNC 122
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT 161
+ G +H LA G + SWG N +GQLG+ TT
Sbjct: 123 SGGWAHSLACDNNGNIYSWGSNSHGQLGIDTT 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,648,977
Number of Sequences: 539616
Number of extensions: 7863802
Number of successful extensions: 14369
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 12174
Number of HSP's gapped (non-prelim): 593
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)