Query 013368
Match_columns 444
No_of_seqs 146 out of 1762
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 03:08:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013368.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013368hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01880 Ac-peptdase-euk N-ac 100.0 5.3E-61 1.2E-65 481.6 44.1 393 25-430 6-399 (400)
2 PRK13013 succinyl-diaminopimel 100.0 4.5E-58 9.8E-63 464.6 41.3 392 23-431 9-424 (427)
3 PRK06915 acetylornithine deace 100.0 3.9E-58 8.4E-63 464.1 39.1 384 22-432 11-421 (422)
4 PRK08588 succinyl-diaminopimel 100.0 1.6E-57 3.4E-62 453.3 41.6 370 28-430 2-377 (377)
5 PRK06837 acetylornithine deace 100.0 2.7E-56 5.8E-61 450.6 40.2 381 22-431 14-424 (427)
6 PRK08596 acetylornithine deace 100.0 3.1E-56 6.7E-61 449.3 40.2 389 23-432 8-419 (421)
7 KOG2275 Aminoacylase ACY1 and 100.0 4.6E-56 9.9E-61 418.8 36.4 394 26-430 23-419 (420)
8 PRK13983 diaminopimelate amino 100.0 1.2E-55 2.5E-60 443.5 41.4 381 25-427 2-399 (400)
9 PRK09133 hypothetical protein; 100.0 1.3E-55 2.8E-60 451.1 41.2 383 25-430 34-470 (472)
10 PRK13009 succinyl-diaminopimel 100.0 3.9E-55 8.5E-60 435.9 42.0 368 29-429 3-374 (375)
11 TIGR01910 DapE-ArgE acetylorni 100.0 3.7E-56 7.9E-61 443.0 34.3 365 32-420 2-375 (375)
12 TIGR01246 dapE_proteo succinyl 100.0 5.6E-55 1.2E-59 433.9 40.2 365 31-428 2-370 (370)
13 PRK08201 hypothetical protein; 100.0 1.2E-54 2.6E-59 442.4 40.5 390 23-429 9-454 (456)
14 PRK07522 acetylornithine deace 100.0 1.5E-54 3.2E-59 433.2 38.4 367 28-429 4-384 (385)
15 PRK07906 hypothetical protein; 100.0 2.3E-54 5.1E-59 436.9 39.4 376 31-427 2-425 (426)
16 TIGR01892 AcOrn-deacetyl acety 100.0 1.5E-54 3.2E-59 430.1 36.8 357 32-424 1-363 (364)
17 PRK06446 hypothetical protein; 100.0 4.6E-54 1E-58 435.2 39.8 382 28-429 2-434 (436)
18 PRK08651 succinyl-diaminopimel 100.0 6.7E-54 1.5E-58 429.7 40.1 377 24-430 2-392 (394)
19 PRK05111 acetylornithine deace 100.0 4E-54 8.7E-59 429.7 38.3 368 28-430 5-382 (383)
20 PRK13004 peptidase; Reviewed 100.0 5.4E-54 1.2E-58 430.5 38.3 381 21-431 8-398 (399)
21 TIGR03526 selenium_YgeY putati 100.0 8.2E-54 1.8E-58 428.6 38.3 377 23-429 8-394 (395)
22 TIGR03320 ygeY M20/DapE family 100.0 7.4E-54 1.6E-58 429.1 37.8 376 24-429 9-394 (395)
23 PRK07338 hypothetical protein; 100.0 6.3E-54 1.4E-58 430.8 36.0 367 22-430 11-399 (402)
24 PRK07473 carboxypeptidase; Pro 100.0 2.2E-53 4.8E-58 421.7 38.3 363 22-428 5-375 (376)
25 PRK09104 hypothetical protein; 100.0 3.5E-53 7.5E-58 432.4 39.8 393 23-429 12-462 (464)
26 PRK06133 glutamate carboxypept 100.0 2.4E-53 5.1E-58 426.7 36.5 370 23-430 32-408 (410)
27 PRK08262 hypothetical protein; 100.0 1.6E-52 3.4E-57 429.9 41.9 385 23-430 39-485 (486)
28 PRK07907 hypothetical protein; 100.0 9.5E-53 2.1E-57 427.4 39.6 390 22-430 12-448 (449)
29 PRK08737 acetylornithine deace 100.0 1.4E-52 3E-57 413.7 37.6 353 27-426 5-362 (364)
30 PRK00466 acetyl-lysine deacety 100.0 3.9E-52 8.4E-57 409.4 36.8 338 26-431 8-345 (346)
31 PRK07079 hypothetical protein; 100.0 2.8E-51 6.1E-56 418.6 41.7 385 28-431 17-457 (469)
32 PRK08652 acetylornithine deace 100.0 2.3E-51 4.9E-56 404.7 37.8 343 28-429 2-345 (347)
33 PRK04443 acetyl-lysine deacety 100.0 2.4E-50 5.2E-55 396.9 37.8 342 27-428 5-348 (348)
34 COG0624 ArgE Acetylornithine d 100.0 7E-50 1.5E-54 402.3 39.2 381 26-430 11-408 (409)
35 TIGR01886 dipeptidase dipeptid 100.0 3.9E-50 8.4E-55 408.6 35.6 369 24-429 9-465 (466)
36 TIGR01900 dapE-gram_pos succin 100.0 1.3E-49 2.8E-54 394.6 34.3 342 33-410 1-373 (373)
37 PRK13007 succinyl-diaminopimel 100.0 6.2E-49 1.3E-53 388.0 36.8 342 27-425 6-351 (352)
38 TIGR01883 PepT-like peptidase 100.0 1.2E-48 2.5E-53 387.3 35.1 349 29-425 1-360 (361)
39 TIGR01902 dapE-lys-deAc N-acet 100.0 2.7E-48 5.9E-53 380.7 36.4 333 32-430 1-335 (336)
40 PRK13381 peptidase T; Provisio 100.0 1.2E-48 2.5E-53 392.5 34.3 360 29-430 2-404 (404)
41 PRK07318 dipeptidase PepV; Rev 100.0 1.7E-48 3.7E-53 397.6 33.6 371 23-430 9-466 (466)
42 PRK07205 hypothetical protein; 100.0 5.6E-48 1.2E-52 391.9 36.6 368 24-430 7-443 (444)
43 PLN02280 IAA-amino acid hydrol 100.0 2.6E-47 5.7E-52 385.7 38.1 368 26-430 95-475 (478)
44 PRK08554 peptidase; Reviewed 100.0 4E-46 8.8E-51 375.6 38.5 371 29-429 2-437 (438)
45 PRK06156 hypothetical protein; 100.0 5.6E-46 1.2E-50 382.7 39.8 371 25-431 43-517 (520)
46 PRK05469 peptidase T; Provisio 100.0 1.1E-46 2.4E-51 378.6 33.1 363 28-431 2-407 (408)
47 PLN02693 IAA-amino acid hydrol 100.0 1.9E-45 4.1E-50 370.1 41.0 365 26-431 45-423 (437)
48 TIGR01893 aa-his-dipept aminoa 100.0 4.1E-45 8.8E-50 373.6 38.5 352 27-428 3-476 (477)
49 TIGR01887 dipeptidaselike dipe 100.0 5.2E-45 1.1E-49 368.2 37.3 360 28-425 2-447 (447)
50 TIGR01882 peptidase-T peptidas 100.0 1.9E-45 4E-50 369.3 29.1 355 28-429 3-407 (410)
51 TIGR01891 amidohydrolases amid 100.0 1.6E-43 3.4E-48 350.5 32.9 346 31-414 2-360 (363)
52 PRK12893 allantoate amidohydro 100.0 2E-43 4.3E-48 355.8 32.9 351 25-431 7-411 (412)
53 PRK15026 aminoacyl-histidine d 100.0 1.8E-42 3.8E-47 351.5 38.9 346 26-428 8-482 (485)
54 PRK12892 allantoate amidohydro 100.0 3.9E-43 8.5E-48 353.7 32.6 348 25-429 7-410 (412)
55 PRK09290 allantoate amidohydro 100.0 1.7E-42 3.7E-47 348.7 34.7 349 25-430 4-411 (413)
56 PRK12891 allantoate amidohydro 100.0 2.6E-42 5.6E-47 347.2 33.6 350 27-431 9-411 (414)
57 PRK12890 allantoate amidohydro 100.0 5.6E-42 1.2E-46 345.2 32.4 348 26-430 7-412 (414)
58 TIGR01879 hydantase amidase, h 100.0 4.2E-41 9.2E-46 337.1 31.3 346 29-428 2-401 (401)
59 COG1473 AbgB Metal-dependent a 100.0 3.4E-40 7.3E-45 321.8 34.1 368 25-430 9-390 (392)
60 KOG2276 Metalloexopeptidases [ 100.0 5.6E-40 1.2E-44 306.4 33.7 397 19-430 7-472 (473)
61 TIGR03176 AllC allantoate amid 100.0 1.5E-39 3.2E-44 325.4 32.2 347 28-430 3-404 (406)
62 PRK13590 putative bifunctional 100.0 4.2E-38 9.2E-43 327.5 33.3 356 20-430 173-588 (591)
63 PRK13799 unknown domain/N-carb 100.0 6.3E-37 1.4E-41 318.4 33.0 359 19-429 172-589 (591)
64 PF01546 Peptidase_M20: Peptid 99.9 5E-27 1.1E-31 210.9 15.9 183 94-426 1-188 (189)
65 COG2195 PepD Di- and tripeptid 99.9 1.6E-24 3.5E-29 211.7 21.8 364 26-430 3-413 (414)
66 COG4187 RocB Arginine degradat 99.9 7.7E-21 1.7E-25 180.1 18.2 274 27-315 7-320 (553)
67 TIGR03106 trio_M42_hydro hydro 99.7 6.2E-16 1.3E-20 150.2 24.1 134 27-169 2-221 (343)
68 PRK10199 alkaline phosphatase 99.7 5.5E-17 1.2E-21 155.1 16.4 123 45-179 50-188 (346)
69 PRK09961 exoaminopeptidase; Pr 99.7 3.9E-16 8.6E-21 152.0 22.6 257 31-428 3-333 (344)
70 TIGR03107 glu_aminopep glutamy 99.7 3.7E-15 8.1E-20 144.7 24.6 254 32-428 2-341 (350)
71 COG1363 FrvX Cellulase M and r 99.7 4.4E-14 9.5E-19 135.6 24.4 152 28-193 2-236 (355)
72 PRK09864 putative peptidase; P 99.6 1.4E-13 3E-18 133.4 23.3 255 31-429 3-342 (356)
73 PF07687 M20_dimer: Peptidase 99.5 4.4E-14 9.6E-19 115.3 8.6 105 206-319 1-106 (111)
74 KOG2194 Aminopeptidases of the 98.9 1.2E-08 2.6E-13 106.4 10.5 145 27-193 56-225 (834)
75 PF04389 Peptidase_M28: Peptid 98.8 1.1E-08 2.5E-13 90.8 6.4 86 92-193 2-89 (179)
76 PF05343 Peptidase_M42: M42 gl 98.5 6.4E-07 1.4E-11 85.4 9.7 66 121-193 125-190 (292)
77 KOG3946 Glutaminyl cyclase [Po 98.1 4.9E-05 1.1E-09 69.4 12.7 133 27-179 50-200 (338)
78 COG2234 Iap Predicted aminopep 97.6 0.00016 3.5E-09 73.5 7.8 91 77-181 185-275 (435)
79 KOG2195 Transferrin receptor a 97.1 0.0017 3.8E-08 68.5 8.3 82 75-180 337-421 (702)
80 KOG2526 Predicted aminopeptida 96.9 0.0049 1.1E-07 59.9 9.0 100 76-193 193-305 (555)
81 PF05450 Nicastrin: Nicastrin; 95.5 0.046 9.9E-07 50.4 7.1 71 91-179 1-74 (234)
82 PF05343 Peptidase_M42: M42 gl 94.8 0.032 7E-07 53.3 4.3 71 347-420 220-292 (292)
83 PRK02256 putative aminopeptida 93.9 0.11 2.3E-06 52.8 5.8 76 348-426 380-460 (462)
84 PTZ00371 aspartyl aminopeptida 91.1 0.49 1.1E-05 48.4 6.3 82 347-431 372-458 (465)
85 PF00883 Peptidase_M17: Cytoso 90.9 3.9 8.4E-05 39.3 11.8 119 31-167 1-141 (311)
86 cd00433 Peptidase_M17 Cytosol 90.5 5.2 0.00011 41.0 13.1 125 30-167 156-296 (468)
87 PRK02813 putative aminopeptida 90.5 0.48 1E-05 47.9 5.6 76 348-426 346-426 (428)
88 PRK02256 putative aminopeptida 87.3 0.94 2E-05 46.1 5.1 49 121-175 251-299 (462)
89 COG4882 Predicted aminopeptida 86.8 1.4 3E-05 42.5 5.6 63 77-169 179-241 (486)
90 PRK00913 multifunctional amino 85.8 16 0.00035 37.5 13.0 122 30-167 173-310 (483)
91 COG0260 PepB Leucyl aminopepti 83.3 21 0.00044 36.7 12.4 118 30-167 169-309 (485)
92 PRK05015 aminopeptidase B; Pro 80.3 55 0.0012 32.9 13.9 127 30-168 102-248 (424)
93 PTZ00412 leucyl aminopeptidase 78.5 37 0.00079 35.3 12.3 125 30-167 214-355 (569)
94 PRK02813 putative aminopeptida 77.0 2.7 5.9E-05 42.5 3.9 48 121-175 225-275 (428)
95 PTZ00371 aspartyl aminopeptida 75.5 5.5 0.00012 40.8 5.6 53 121-175 242-295 (465)
96 PF09940 DUF2172: Domain of un 71.5 16 0.00035 35.8 7.4 64 83-179 124-187 (386)
97 COG1362 LAP4 Aspartyl aminopep 69.3 9.2 0.0002 38.0 5.3 78 347-427 353-435 (437)
98 KOG2597 Predicted aminopeptida 62.5 1.2E+02 0.0025 31.3 11.6 126 30-168 191-332 (513)
99 KOG3566 Glycosylphosphatidylin 60.0 1.5E+02 0.0033 30.9 12.0 95 55-180 93-194 (617)
100 PF02127 Peptidase_M18: Aminop 46.8 29 0.00064 35.1 4.7 75 347-424 352-431 (432)
101 PRK09929 hypothetical protein; 46.1 91 0.002 24.1 6.1 71 1-71 1-73 (91)
102 PF04114 Gaa1: Gaa1-like, GPI 42.9 1.6E+02 0.0034 30.7 9.3 75 76-180 3-78 (504)
103 COG2195 PepD Di- and tripeptid 36.4 44 0.00095 33.7 4.0 88 76-174 46-139 (414)
104 PF11131 PhrC_PhrF: Rap-phr ex 34.8 79 0.0017 19.6 3.3 21 4-24 2-22 (37)
105 PF06675 DUF1177: Protein of u 34.2 3.9E+02 0.0084 24.9 12.2 89 88-193 29-130 (276)
106 PRK06742 flagellar motor prote 33.1 3.8E+02 0.0083 24.4 10.5 14 92-105 147-160 (225)
107 KOG2596 Aminopeptidase I zinc 32.4 48 0.001 32.8 3.3 81 349-432 388-473 (479)
108 PF07172 GRP: Glycine rich pro 27.6 41 0.00088 26.2 1.7 9 1-9 1-9 (95)
109 KOG3374 Cellular repressor of 26.4 3E+02 0.0066 24.0 6.7 24 153-178 141-164 (210)
110 COG1464 NlpA ABC-type metal io 23.8 1.9E+02 0.0042 27.1 5.6 27 47-73 38-65 (268)
111 COG4635 HemG Flavodoxin [Energ 23.2 74 0.0016 27.4 2.6 34 37-72 4-37 (175)
112 COG0527 LysC Aspartokinases [A 21.7 1.7E+02 0.0036 30.0 5.3 83 47-142 117-208 (447)
113 COG1944 Uncharacterized conser 20.3 3.8E+02 0.0082 26.9 7.2 70 49-150 16-88 (398)
No 1
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=5.3e-61 Score=481.63 Aligned_cols=393 Identities=58% Similarity=1.016 Sum_probs=325.4
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
...++.+++|++|++|||+++..++.++++||+++|+++|++++.++...+++|+++.++|.++..|+|+|+|||||||.
T Consensus 6 ~~~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~ 85 (400)
T TIGR01880 6 WEEDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPV 85 (400)
T ss_pred cchHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCC
Confidence 45688999999999999998655678999999999999999988776544688999999775544589999999999999
Q ss_pred CCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
++..|+++||.+.+++||++||||++|||++++++|.|++.|++.+.+++++|.|+|+++||.|+..|++.+++++.+++
T Consensus 86 ~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~ 165 (400)
T TIGR01880 86 FREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKA 165 (400)
T ss_pred CcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccC
Confidence 87889999999987229999999999999999999999999999887888999999999999886469999998766666
Q ss_pred CceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhch-hccC
Q 013368 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGL-KAEG 263 (444)
Q Consensus 185 ~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~-~~~~ 263 (444)
.|+.++++.|..+|++...++.+++|..+++|+++|+++|+|.|...||+..++.++..|.++....++.+.... ...+
T Consensus 166 ~~~~~~~d~g~~~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~~~~~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 245 (400)
T TIGR01880 166 LNLGFALDEGLASPDDVYRVFYAERVPWWVVVTAPGNPGHGSKLMENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIG 245 (400)
T ss_pred CceEEEEcCCCcccccccceeEEeeEEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccccc
Confidence 678888887765666556889999999999999999999999865459999999999999876543333222111 1112
Q ss_pred CceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCc
Q 013368 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPIL 343 (444)
Q Consensus 264 ~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 343 (444)
..+|++++.++||. ..|+||++|++.+|+|+.|.++.+++.++|++++.....++++++.. ....|+.
T Consensus 246 ~~~t~~v~~i~gG~------~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~~~~~~~~~~------~~~~~~~ 313 (400)
T TIGR01880 246 DVTSVNLTKLKGGV------QSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAGEGVTYEFSQ------HSGKPLV 313 (400)
T ss_pred ccceeecceeccCC------cCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccCCceEEEEee------cCCCCCC
Confidence 34799999999997 88999999999999999999999999999999987533455565543 1233333
Q ss_pred cccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 013368 344 TATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYES 423 (444)
Q Consensus 344 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~ 423 (444)
...+.++++++.+.+++++.+... .+...+|+||+++++..|+|++.|||+..+...+|++||+++++++.+++++|.+
T Consensus 314 ~~~~~~~~lv~~l~~a~~~~~~~~-~~~~~~g~tDa~~~~~~gip~v~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~~~~ 392 (400)
T TIGR01880 314 TPHDDSNPWWVAFKDAVKEMGCTF-KPEILPGSTDSRYIRAAGVPALGFSPMNNTPVLLHDHNEFLNEAVFLRGIEIYQT 392 (400)
T ss_pred CCCCCCCHHHHHHHHHHHHcCCee-cceeecCcchHHHHHhCCCCeEEECCccCCcccccCCCCceEHHHHHHHHHHHHH
Confidence 345668899999999999976543 4556789999999999999999999986433468999999999999999999999
Q ss_pred HHHHHHc
Q 013368 424 IIKAYAS 430 (444)
Q Consensus 424 ~l~~l~~ 430 (444)
++..+..
T Consensus 393 ~l~~~~~ 399 (400)
T TIGR01880 393 LISALAS 399 (400)
T ss_pred HHHHhhc
Confidence 9999864
No 2
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.5e-58 Score=464.58 Aligned_cols=392 Identities=19% Similarity=0.306 Sum_probs=312.4
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC-ChhHHHHHHHHHHHHCCCceEEEeecC--------CCCeEEEEecCCCCCCCcE
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPNP-DYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSI 93 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~-~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nl~~~~~g~~~~~~~i 93 (444)
.+++.+++++++++|++|||+++.+ +|.++++||.++|+++|++++.++... +++|++++++|.++ .|+|
T Consensus 9 ~~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~-~~~i 87 (427)
T PRK13013 9 IEARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARD-GDCV 87 (427)
T ss_pred HHHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCC-CCEE
Confidence 4556788999999999999998554 567999999999999999988765321 25799999976543 4789
Q ss_pred EEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccH
Q 013368 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (444)
Q Consensus 94 ~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (444)
+|+||+||||.+ +.|+++||++.++ ||+|||||++|||++++++|.|++.|++.+.+++++|.|+|+++||.|+..|.
T Consensus 88 ~l~gH~DvVp~~-~~W~~~Pf~~~~~-dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~ 165 (427)
T PRK13013 88 HFNSHHDVVEVG-HGWTRDPFGGEVK-DGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGV 165 (427)
T ss_pred EEEeccccCCCC-CCCcCCCCCceEE-CCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHH
Confidence 999999999986 6799999999998 99999999999999999999999999998877889999999999998865588
Q ss_pred HHHHhccccc--cCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhh
Q 013368 174 EKFADSHVFN--SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRAS 250 (444)
Q Consensus 174 ~~~~~~~~~~--~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~ 250 (444)
.++++++.++ ..|++++.+ |+....+..+++|..+++|+++|+++|++.|+.| ||+..++++++.|+++...
T Consensus 166 ~~l~~~~~~~~~~~d~~i~~e-----p~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~ 240 (427)
T PRK13013 166 AYLAEQGRFSPDRVQHVIIPE-----PLNKDRICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFP 240 (427)
T ss_pred HHHHhcCCccccCCCEEEEec-----CCCCCceEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhh
Confidence 8888876555 457777653 5543468889999999999999999999999999 9999999999999754211
Q ss_pred hhHHHHhchh---ccCCceeeeeeeeccCCCCCC----CcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc---C
Q 013368 251 QFDLVKAGLK---AEGEVVSVNMAFLKAGTPSPN----GFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP---A 320 (444)
Q Consensus 251 ~~~~~~~~~~---~~~~~~t~~~~~i~~G~~~~~----~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~---~ 320 (444)
.......... .....++++++.|++|....+ ....|+||++|++++|+|+.+.++.+++.++|++.+.. .
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~ 320 (427)
T PRK13013 241 LLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRA 320 (427)
T ss_pred hhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1110000000 001247899999999973211 11239999999999999999999999999999988763 2
Q ss_pred CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcC-C-CeEEEccCCCC
Q 013368 321 SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERG-L-PAIGFSPMANT 398 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~g-i-p~v~~gp~~~~ 398 (444)
.++++++++. ....|+. ..+.++++++.+.+++++..+..+.....+|++|++++...| + |++.|||+...
T Consensus 321 ~~~~~~~~~~------~~~~~p~-~~~~~~~lv~~l~~a~~~~~g~~~~~~~~~g~~D~~~~~~~g~~~~~v~fGPg~~~ 393 (427)
T PRK13013 321 RPGFAYEIRD------LFEVLPT-MTDRDAPVVRSVAAAIERVLGRQADYVVSPGTYDQKHIDRIGKLKNCIAYGPGILD 393 (427)
T ss_pred CCCceeEEEE------cccCCcc-cCCCCCHHHHHHHHHHHHhhCCCCceeecCccCCHHHHHhcCCCCCEEEECCCCcc
Confidence 2355666553 1233333 356678999999999998765443445567889999999987 4 69999998654
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 399 PILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 399 ~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
.+|++|||++++++.+++++|+.++.++++.
T Consensus 394 --~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 394 --LAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred --ccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 6999999999999999999999999998753
No 3
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.9e-58 Score=464.07 Aligned_cols=384 Identities=21% Similarity=0.334 Sum_probs=311.8
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec-----------------CCCCeEEEEec
Q 013368 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA-----------------KNKPLILLKWP 84 (444)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~-----------------~~~~nl~~~~~ 84 (444)
.++.+.++.++++++|++|||+| ++|.+++++|+++|+++|++++.++.. .+++||++.++
T Consensus 11 ~~~~~~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~ 88 (422)
T PRK06915 11 YIESHEEEAVKLLKRLIQEKSVS--GDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLK 88 (422)
T ss_pred HHHhhHHHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEc
Confidence 35667788999999999999996 789999999999999999998765421 24689999997
Q ss_pred CCCCCCCcEEEEeecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeec
Q 013368 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (444)
Q Consensus 85 g~~~~~~~i~l~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (444)
|.++ .|+|+|+|||||||.++ +.|+++||+++++ +|++||||++|||++++++|.|++.|++.+.+++++|.|++++
T Consensus 89 g~~~-~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~ 166 (422)
T PRK06915 89 GSGG-GKSMILNGHIDVVPEGDVNQWDHHPYSGEVI-GGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVI 166 (422)
T ss_pred CCCC-CCeEEEEeeccccCCCCcccCcCCCCCceEE-CCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 7554 38999999999999976 7899999999997 9999999999999999999999999999887788999999999
Q ss_pred CcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHH
Q 013368 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (444)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~ 242 (444)
+||.|+ .|+..++.++ + ..|.+++. +|++ ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++.
T Consensus 167 dEE~g~-~G~~~~~~~~-~-~~d~~i~~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~ 237 (422)
T PRK06915 167 EEESGG-AGTLAAILRG-Y-KADGAIIP-----EPTN-MKFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVID 237 (422)
T ss_pred ccccCC-cchHHHHhcC-c-CCCEEEEC-----CCCC-ccceeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHH
Confidence 999886 5888888765 3 35776664 4654 568899999999999999999999999999 99999999999
Q ss_pred HHHhchhhhhHHHHhch-hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCC
Q 013368 243 SVRRFRASQFDLVKAGL-KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS 321 (444)
Q Consensus 243 ~l~~l~~~~~~~~~~~~-~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~ 321 (444)
.|..+....-....... ......+|++++.|+||. ..|+||+.|++.+|+|+.|.++.+++.++|++.++...
T Consensus 238 ~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~------~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 238 HLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGS------WPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELN 311 (422)
T ss_pred HHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCC------CCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 99876531100000000 001123589999999987 88999999999999999999999999999998876422
Q ss_pred C------CceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhc-CCCeEEEcc
Q 013368 322 R------NMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER-GLPAIGFSP 394 (444)
Q Consensus 322 ~------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~-gip~v~~gp 394 (444)
. ...++++... ....|. .+..++++++++.++++++.+..+.....+|++|+++|.+. |+|++.|||
T Consensus 312 ~~~~~~~~~~~~v~~~~----~~~~~~--~~~~d~~lv~~l~~a~~~~~G~~~~~~~~~g~tD~~~~~~~~giP~v~fGp 385 (422)
T PRK06915 312 DVDEWFVEHPVEVEWFG----ARWVPG--ELEENHPLMTTLEHNFVEIEGNKPIIEASPWGTDGGLLTQIAGVPTIVFGP 385 (422)
T ss_pred ccChhhhcCCceEEeec----ccCCcc--cCCCCCHHHHHHHHHHHHHhCCCCeeceeeeeccHHHHhccCCCCEEEECC
Confidence 1 1223333200 012233 35678999999999999986554344556789999999987 999999999
Q ss_pred CCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHccc
Q 013368 395 MANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 432 (444)
Q Consensus 395 ~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~ 432 (444)
+... .+|++||+++++++.+++++|+.++..+++..
T Consensus 386 g~~~--~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 386 GETK--VAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred CCcc--ccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 8654 69999999999999999999999999997654
No 4
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.6e-57 Score=453.26 Aligned_cols=370 Identities=22% Similarity=0.325 Sum_probs=308.9
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC-
Q 013368 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP- 106 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~- 106 (444)
++.+++|++|++|||+| ++|.+++++|.++|+++|++++.++...+++|+++.+ |.+ .|+|+|+||+||||+++
T Consensus 2 ~~~~~~l~~Lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~-g~~--~~~il~~~H~DtVp~~~~ 76 (377)
T PRK08588 2 EEKIQILADIVKINSVN--DNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEI-GSG--SPVLALSGHMDVVAAGDV 76 (377)
T ss_pred hHHHHHHHHHhcCCCCC--CcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEe-CCC--CceEEEEeeecccCCCCc
Confidence 57899999999999996 6889999999999999999988776555678999998 432 38999999999999965
Q ss_pred CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCc
Q 013368 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLN 186 (444)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d 186 (444)
+.|+++||.+.++ +|++||||++|||++++++|.|++.|.+.+..++++|.|+|+++||.|+ .|++++++++.+++.|
T Consensus 77 ~~w~~~Pf~~~~~-~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~-~G~~~~~~~~~~~~~d 154 (377)
T PRK08588 77 DKWTYDPFELTEK-DGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGE-LGAKQLTEKGYADDLD 154 (377)
T ss_pred ccCcCCCCCeEEE-CCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCc-hhHHHHHhcCccCCCC
Confidence 7899999999997 9999999999999999999999999999887788999999999999885 7999999987666677
Q ss_pred eEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCc
Q 013368 187 VGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (444)
Q Consensus 187 ~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~ 265 (444)
.+++.+ |+. ..++++++|..+++|+++|+++|+|.|+.| |||..+++++..|.++... +... ...-..
T Consensus 155 ~~i~~e-----p~~-~~i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~----~~~~-~~~~~~ 223 (377)
T PRK08588 155 ALIIGE-----PSG-HGIVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDS----IKKH-NPYLGG 223 (377)
T ss_pred EEEEec-----CCC-ceeEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhh----hccc-CccCCC
Confidence 766653 543 568889999999999999999999999998 9999999999999865321 1100 011134
Q ss_pred eeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCc
Q 013368 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPIL 343 (444)
Q Consensus 266 ~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~ 343 (444)
+|++++.++||. ..|+||++|++++|+|+.|.++.+++.++|+++++.. ..+++++++.. ...|++
T Consensus 224 ~t~~v~~i~gG~------~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~------~~~~p~ 291 (377)
T PRK08588 224 LTHVVTIINGGE------QVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIY------SNHRPV 291 (377)
T ss_pred CceeeeEEeCCC------cCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEe------cCCCCc
Confidence 789999999987 8999999999999999999999999999999888642 23345555531 233433
Q ss_pred cccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHh--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013368 344 TATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 344 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~--~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
..+.++++++.++++++++.+..+.....+|+||+++|.. .|+|++.|||+... .+|++||+++++++.+++++|
T Consensus 292 -~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~~~~ip~i~~Gpg~~~--~~H~~~E~i~~~~l~~~~~~~ 368 (377)
T PRK08588 292 -ASDKDSKLVQLAKDVAKSYVGQDIPLSAIPGATDASSFLKKKPDFPVIIFGPGNNL--TAHQVDEYVEKDMYLKFIDIY 368 (377)
T ss_pred -CCCCCCHHHHHHHHHHHHhhCCCCceecCCCcccHHHHhhhcCCCCEEEECCCCCc--cCCCCCceeEHHHHHHHHHHH
Confidence 3556899999999999997654434455678999999975 38999999998533 699999999999999999999
Q ss_pred HHHHHHHHc
Q 013368 422 ESIIKAYAS 430 (444)
Q Consensus 422 ~~~l~~l~~ 430 (444)
..++..+++
T Consensus 369 ~~~~~~~~~ 377 (377)
T PRK08588 369 KEIIIQYLK 377 (377)
T ss_pred HHHHHHHhC
Confidence 999988753
No 5
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.7e-56 Score=450.57 Aligned_cols=381 Identities=19% Similarity=0.273 Sum_probs=310.8
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec-----------------CCCCeEEEEec
Q 013368 22 SPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA-----------------KNKPLILLKWP 84 (444)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~-----------------~~~~nl~~~~~ 84 (444)
..+++.++.+++|++|++|||+| ++|.++++||+++|+++|++++.++.. ++++||++.+.
T Consensus 14 ~i~~~~~~~~~~l~~li~ipS~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~ 91 (427)
T PRK06837 14 AVDAGFDAQVAFTQDLVRFPSTR--GAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYR 91 (427)
T ss_pred HHHhhhHHHHHHHHHHhccCCCC--CcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEec
Confidence 45667889999999999999996 688899999999999999998765421 25789999998
Q ss_pred CCCCCCCcEEEEeecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeec
Q 013368 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (444)
Q Consensus 85 g~~~~~~~i~l~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (444)
|.+++.|+|+|+|||||||+++ +.|+++||+++++ +|++||||++|||++++++|.|++.|++.+..++++|.|+|++
T Consensus 92 g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~ 170 (427)
T PRK06837 92 PAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIV-DGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVI 170 (427)
T ss_pred CCCCCCCeEEEEeecccCCCCCccccccCCCCcEEE-CCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEe
Confidence 7655458999999999999986 7899999999998 9999999999999999999999999999887788999999999
Q ss_pred CcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHH
Q 013368 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (444)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~ 242 (444)
+||.++ .|+..++..+. ..|++++.+ |+. ..++++++|..+++|+++|+++|+|.|+.| ||+..++++++
T Consensus 171 dEE~~g-~g~~~~~~~~~--~~d~~iv~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~ 241 (427)
T PRK06837 171 EEESTG-NGALSTLQRGY--RADACLIPE-----PTG-EKLVRAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQ 241 (427)
T ss_pred ccccCC-HhHHHHHhcCc--CCCEEEEcC-----CCC-CccccccceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHH
Confidence 999876 48887776543 257766653 554 578899999999999999999999999998 99999999999
Q ss_pred HHHhchhhhhHHH-Hhc-hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC
Q 013368 243 SVRRFRASQFDLV-KAG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA 320 (444)
Q Consensus 243 ~l~~l~~~~~~~~-~~~-~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~ 320 (444)
.|..+........ ... .......++++++.++||. ..|+||++|++.+++|+.|.++.+++.++|++.++..
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~------~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~ 315 (427)
T PRK06837 242 ALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGD------WASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAA 315 (427)
T ss_pred HHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCC------CCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHH
Confidence 9987643211000 000 0001124588999999987 8899999999999999999999999999999887642
Q ss_pred CCC--------ceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHh-cCCCeEE
Q 013368 321 SRN--------MTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE-RGLPAIG 391 (444)
Q Consensus 321 ~~~--------~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~-~gip~v~ 391 (444)
... .++++.. ...+++ .++.++++++.+.+++++..+..+.+...+|++|++++.. .|+|++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~-------~~~~p~-~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~g~tDa~~~~~~~gip~v~ 387 (427)
T PRK06837 316 ARDDRFLSNNPPEVVWSG-------FLAEGY-VLEPGSEAEAALARAHAAVFGGPLRSFVTTAYTDTRFYGLYYGIPALC 387 (427)
T ss_pred HhcChhhhhCCCeEEEEe-------cccCCc-CCCCCCHHHHHHHHHHHHHhCCCCeeeEEeeccchHHHhccCCCCEEE
Confidence 111 2333321 123333 4677899999999999987554435566789999999985 7999999
Q ss_pred EccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 392 FSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 392 ~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
|||+.. .+|++||+++++++.+++++|+.++..++..
T Consensus 388 ~Gp~~~---~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~ 424 (427)
T PRK06837 388 YGPSGE---GIHGFDERVDLESVRKVTKTIALFVAEWCGV 424 (427)
T ss_pred ECCCCC---ccCCCCceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 999865 5999999999999999999999999988753
No 6
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.1e-56 Score=449.32 Aligned_cols=389 Identities=20% Similarity=0.268 Sum_probs=311.9
Q ss_pred CCCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCC-CCcEEEEeecc
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQ-LPSILLNSHTD 100 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~-~~~i~l~~H~D 100 (444)
.+...++.++++++|++|||+|+. ++|.++++||+++|+++|++++.++...+++|+++.++|.++. .|+|+|+||+|
T Consensus 8 i~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~D 87 (421)
T PRK08596 8 IELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMD 87 (421)
T ss_pred HHhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEecccc
Confidence 345668899999999999999854 3688899999999999999998776545678999999775432 36799999999
Q ss_pred cccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhc
Q 013368 101 VVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (444)
Q Consensus 101 tvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (444)
|||.++ +.|+.+||.+.++ ||+|||||++|||++++++|.|+++|++.+.+++++|.|+|+++||.|+ .|+++++++
T Consensus 88 tVp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~-~G~~~~~~~ 165 (421)
T PRK08596 88 VAEVSADEAWETNPFEPTIK-DGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGE-AGTLQCCER 165 (421)
T ss_pred ccCCCCccccccCCCCcEEE-CCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCC-cCHHHHHhc
Confidence 999987 6799999999998 9999999999999999999999999999888889999999999999986 699999987
Q ss_pred cccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeec----------CCccCCCCCC-CHHHHHHHHHHHHHhch
Q 013368 180 HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGA----------PGHGAKLYDN-SAMENLFKSIESVRRFR 248 (444)
Q Consensus 180 ~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~----------~~Hs~~p~~g-nai~~~~~~i~~l~~l~ 248 (444)
+. ..|++++.+ |+. . .+.+++|...+.++++|. .+|++.|+.| ||+..+++++..|+.+.
T Consensus 166 ~~--~~d~~i~~e-----p~~-~-~~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~ 236 (421)
T PRK08596 166 GY--DADFAVVVD-----TSD-L-HMQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELE 236 (421)
T ss_pred CC--CCCEEEECC-----CCC-C-ccccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHH
Confidence 53 358888886 443 2 257889998888888875 3699989888 99999999999998764
Q ss_pred hhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCC------
Q 013368 249 ASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR------ 322 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~------ 322 (444)
.. +.............++++++.|+||. ..|+||++|++.+|+|+.|.++.+++.++|++.+.....
T Consensus 237 ~~-~~~~~~~~~~~~~~~t~~v~~i~gG~------~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 237 RH-WAVMKSYPGFPPGTNTINPAVIEGGR------HAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HH-HhhcccCccCCCCCcceeeeeeeCCC------CCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 32 21110000001123689999999987 899999999999999999999999999999988763211
Q ss_pred --CceEEEeecc-cccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCC
Q 013368 323 --NMTFEFKQRA-SLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTP 399 (444)
Q Consensus 323 --~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~ 399 (444)
..++++.... ........|++ .++.++++++++.+++++..+..+.+...+|+||++++..+|+|++.|||+...
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~~- 387 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSL-EIDSEHPAVKTLSSAHESVLSKNAILDMSTTVTDGGWFAEFGIPAVIYGPGTLE- 387 (421)
T ss_pred hCCceeEEecccccccccccCCCc-cCCCCchHHHHHHHHHHHHhCCCCeeeEEeeecchhhhhhcCCCEEEECCCccc-
Confidence 1222221000 00001123443 467789999999999999876554555667899999999999999999999643
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHccc
Q 013368 400 ILLHDHNEFLNQAEYLKGIDIYESIIKAYASYV 432 (444)
Q Consensus 400 ~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~ 432 (444)
.+|++||+++++++.+++++|..++.++++.+
T Consensus 388 -~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 388 -EAHSVNEKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred -ccCCCCceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 69999999999999999999999999998765
No 7
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-56 Score=418.80 Aligned_cols=394 Identities=49% Similarity=0.846 Sum_probs=348.0
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChh-HHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~-~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
.+...++.++++++||++-+.++.. ++++|+.++.+.+|..++.++...+.++++.+++|++|..+.|+|++|+||||+
T Consensus 23 e~~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~ 102 (420)
T KOG2275|consen 23 EENISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPV 102 (420)
T ss_pred ccchHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCC
Confidence 3467899999999999987777766 899999999999999998888777899999999999999999999999999999
Q ss_pred CCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
..+.|+++||++..+++|.|||||++|||+..++.|+|++.|+..+.+++++|.+.|.+|||.|+..|++.+++..++.+
T Consensus 103 f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~ 182 (420)
T KOG2275|consen 103 FREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKK 182 (420)
T ss_pred CcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcc
Confidence 98999999999997569999999999999999999999999999999999999999999999997789999998666777
Q ss_pred CceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhch-hccC
Q 013368 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGL-KAEG 263 (444)
Q Consensus 185 ~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~-~~~~ 263 (444)
..+++++|+|...+..-..+.+++||..+++|++.|.+||+|.|....++.++.++++.+.+++..+++.+.+++ ...+
T Consensus 183 l~~~filDEG~~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~ 262 (420)
T KOG2275|consen 183 LNLGFILDEGGATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPPNTAIEKLEKLVESLEEFREKQVDLLASGPKLALG 262 (420)
T ss_pred cceeEEecCCCCCcccceeEEEEeeceeEEEEEecCCCCCCCCCCCccHHHHHHHHHHHHHHhHHHHHHHhhcCCceecc
Confidence 778999999977666656789999999999999999999999988889999999999999999877777776542 3456
Q ss_pred CceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHH-HHHhccCCCCceEEEeecccccccCCCCC
Q 013368 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRI-VEEWAPASRNMTFEFKQRASLHDKFGRPI 342 (444)
Q Consensus 264 ~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (444)
..+|+|++.++||. +.|++|+..++.+|+|..+..+.+++.+++ ++...+...++.+++.... ....++
T Consensus 263 ~vtT~Nv~~i~GGv------~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~~~eg~t~~f~~~~----~~~~~~ 332 (420)
T KOG2275|consen 263 DVTTINVGIINGGV------QSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEEAGEGVTLEFSQKV----ILDYPP 332 (420)
T ss_pred ceeEEeeeeeeccc------ccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhhcCCceEEeccCcc----cCCCCC
Confidence 78999999999998 999999999999999999999999999999 4444434455666666421 004445
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013368 343 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 422 (444)
Q Consensus 343 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 422 (444)
.+..+.++|++.++..++++.+++. .+..++|+||.++++..|+|++.|.|..+.+-..|..||+...+.+.+|+++|.
T Consensus 333 ~t~~~~s~p~w~~~~~a~~~~~~k~-~~~i~~gstdsr~~rn~gvp~~~fsp~~nt~~~~H~hnE~l~~~~~l~gi~~~~ 411 (420)
T KOG2275|consen 333 VTPTDDSNPFWTAFAGALKDEGGKG-YPEIGPGSTDSRHIRNEGVPAIGFSPIINTPMLLHDHNEFLNEKVFLRGIEIYY 411 (420)
T ss_pred CCCCCCCChHHHHHHHHHHHhcCcc-ceeecccccccchhhhcCcchhcccccccccceecchhhhhCchhhhhhhhHHH
Confidence 5556778899999999999999877 678889999999999999999999999887778999999999999999999999
Q ss_pred HHHHHHHc
Q 013368 423 SIIKAYAS 430 (444)
Q Consensus 423 ~~l~~l~~ 430 (444)
.++.+++.
T Consensus 412 ~~i~~~~~ 419 (420)
T KOG2275|consen 412 TIIVNLAN 419 (420)
T ss_pred HHHHhhcC
Confidence 98887753
No 8
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-55 Score=443.53 Aligned_cols=381 Identities=20% Similarity=0.308 Sum_probs=307.5
Q ss_pred CChhHHHHHHHhhhcccCCCCC---CChhHHHHHHHHHHHHCCCc-eEEEeecC----C--CCeEEEEecCCCCCCCcEE
Q 013368 25 KSDDSIIERFRAYLQIDTSQPN---PDYTNASKFILAQAEALSLE-SQTLEFAK----N--KPLILLKWPGSNPQLPSIL 94 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~---~~e~~~~~~l~~~l~~~G~~-~~~~~~~~----~--~~nl~~~~~g~~~~~~~i~ 94 (444)
...++++++|++|++|||+|+. .+|.+++++|.++|+++|++ ++.++..+ + ++|+++.++|.++ .++|+
T Consensus 2 ~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~-~~~ll 80 (400)
T PRK13983 2 ELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDG-KRTLW 80 (400)
T ss_pred chHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCC-CCeEE
Confidence 3457899999999999999853 35889999999999999998 77655321 1 6899999976543 36999
Q ss_pred EEeecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccH
Q 013368 95 LNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (444)
Q Consensus 95 l~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (444)
|+||+||||.++ +.|+.+||.+.++ +|+|||||++|||++++++|.|++.|++.+.+++++|.|+|+++||.|+..|+
T Consensus 81 l~~H~Dtvp~~~~~~W~~~p~~~~~~-~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~ 159 (400)
T PRK13983 81 IISHMDVVPPGDLSLWETDPFKPVVK-DGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGI 159 (400)
T ss_pred EEeeccccCCCCcccccCCCCcceee-CCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccH
Confidence 999999999975 7899999999997 99999999999999999999999999998878899999999999998864599
Q ss_pred HHHHhc--cccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHh-chh
Q 013368 174 EKFADS--HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRR-FRA 249 (444)
Q Consensus 174 ~~~~~~--~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~-l~~ 249 (444)
+++++. +.+.+.|++++.+.+ .|++ ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|.. +..
T Consensus 160 ~~~~~~~~~~~~~~d~~i~~~~~--~~~~-~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 236 (400)
T PRK13983 160 QYLLKKHPELFKKDDLILVPDAG--NPDG-SFIEIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHE 236 (400)
T ss_pred HHHHhhcccccCCCCEEEEecCC--CCCC-ceeEEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999986 445556878877644 3554 467889999999999999999999999998 999999999999976 322
Q ss_pred hhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCC--CCceEE
Q 013368 250 SQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS--RNMTFE 327 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~--~~~~~~ 327 (444)
. +.... ........+++++.+.+|. ...|+||++|++++|+|+.+.++.+++.++|+++++... .+.+++
T Consensus 237 ~-~~~~~--~~~~~~~~~~~~~~~~~g~-----~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~ 308 (400)
T PRK13983 237 K-FNAKD--PLFDPPYSTFEPTKKEANV-----DNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIE 308 (400)
T ss_pred h-hcccc--cccCCCCcccccceeecCC-----cCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCccee
Confidence 1 11000 0000123456677776652 278999999999999999999999999999999887432 234555
Q ss_pred EeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCc
Q 013368 328 FKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNE 407 (444)
Q Consensus 328 ~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E 407 (444)
+... ....|++ .++.++++++++.+++++..+..+.+...+|++|+++++..|+|++.|||+.. .+|++||
T Consensus 309 ~~~~-----~~~~~~~-~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~td~~~~~~~gip~v~~Gp~~~---~~H~~nE 379 (400)
T PRK13983 309 VEIV-----QREQAPP-PTPPDSEIVKKLKRAIKEVRGIEPKVGGIGGGTVAAFLRKKGYPAVVWSTLDE---TAHQPNE 379 (400)
T ss_pred EEEe-----eccCCcc-CCCCCcHHHHHHHHHHHHhcCCCceeeeecCcHHHHHHHHcCCCEEEeCCccc---cCCCCCc
Confidence 5431 1122332 46788999999999999986654455667889999999989999999999865 5999999
Q ss_pred cccHHHHHHHHHHHHHHHHH
Q 013368 408 FLNQAEYLKGIDIYESIIKA 427 (444)
Q Consensus 408 ~i~~~~l~~~~~~~~~~l~~ 427 (444)
+++++++.+++++|.+++..
T Consensus 380 ~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 380 YAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred eeeHHHHHHHHHHHHHHHhc
Confidence 99999999999999998753
No 9
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-55 Score=451.11 Aligned_cols=383 Identities=21% Similarity=0.324 Sum_probs=306.1
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee---cCCCCeEEEEecCCCCCCCcEEEEeeccc
Q 013368 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF---AKNKPLILLKWPGSNPQLPSILLNSHTDV 101 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~---~~~~~nl~~~~~g~~~~~~~i~l~~H~Dt 101 (444)
.+.++.+++|++|++|||+++.+++.++++||.++|+++|++++.++. ..+++|+++.++|+++ .++|+|+||+||
T Consensus 34 ~~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~-~~~lll~~H~Dt 112 (472)
T PRK09133 34 ADQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDP-KKPILLLAHMDV 112 (472)
T ss_pred hhHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCC-CCcEEEEeeccc
Confidence 467889999999999999986678899999999999999998654332 2367899999977654 378999999999
Q ss_pred ccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcc-cCccccHHHHHhcc
Q 013368 102 VPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE-IGGHDGAEKFADSH 180 (444)
Q Consensus 102 vp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-~g~~~G~~~~~~~~ 180 (444)
||.+++.|+++||+++++ ||+|||||++|||++++++|.|++.|++.+..++++|.|+++++|| .| ..|++.+++++
T Consensus 113 Vp~~~~~W~~dPf~~~~~-dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g-~~G~~~l~~~~ 190 (472)
T PRK09133 113 VEAKREDWTRDPFKLVEE-NGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTP-MNGVAWLAENH 190 (472)
T ss_pred CCCChhcCCCCCCcceEe-CCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCc-cchHHHHHHHH
Confidence 999877899999999998 9999999999999999999999999998887788999999999999 56 47999999864
Q ss_pred c-cccCceEEEeccCC------CCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhh---
Q 013368 181 V-FNSLNVGIVLDEGL------ASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRAS--- 250 (444)
Q Consensus 181 ~-~~~~d~~~~~~~g~------~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~--- 250 (444)
. .-..|++++ +.+. .+|+. ..++.+++|..+++|+++|+++|||.|+..|||..+++++..|..+...
T Consensus 191 ~~~~~~~~~i~-e~~~~~~~~~gept~-~~i~~g~kG~~~~~i~v~G~~~Hss~p~~~nAi~~l~~~l~~l~~~~~~~~~ 268 (472)
T PRK09133 191 RDLIDAEFALN-EGGGGTLDEDGKPVL-LTVQAGEKTYADFRLEVTNPGGHSSRPTKDNAIYRLAAALSRLAAYRFPVML 268 (472)
T ss_pred hhccCeEEEEE-CCCccccCCCCCceE-EEeeeecceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHhhCCCCCcc
Confidence 2 112477666 6543 24543 4678999999999999999999999987559999999999999864210
Q ss_pred ------hhHHH---------------H-------------h-chhccCCceeeeeeeeccCCCCCCCcccccccCceEEE
Q 013368 251 ------QFDLV---------------K-------------A-GLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAG 295 (444)
Q Consensus 251 ------~~~~~---------------~-------------~-~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~ 295 (444)
.++.+ . . ........+|++++.+++|. ..|+||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~------~~NvVP~~a~~~ 342 (472)
T PRK09133 269 NDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGH------AENALPQRATAN 342 (472)
T ss_pred CCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCC------cCccCCCceEEE
Confidence 01000 0 0 00000135789999999987 899999999999
Q ss_pred EEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhc-CCCCCceeec
Q 013368 296 FDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKAN-GKLGKPEIFP 374 (444)
Q Consensus 296 ~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~-~~~~~~~~~~ 374 (444)
+|+|+.|.++.+++.++|+++++. .++++++.. ...+. ...+.+.++++.+++++++.. +....+..++
T Consensus 343 lDiR~~p~~~~e~v~~~I~~~i~~--~~v~v~~~~-------~~~~~-~~~~~~~~l~~~l~~~~~~~~~g~~~~~~~~~ 412 (472)
T PRK09133 343 VNCRIFPGDTIEAVRATLKQVVAD--PAIKITRIG-------DPSPS-PASPLRPDIMKAVEKLTAAMWPGVPVIPSMST 412 (472)
T ss_pred EEEEeCCchhHHHHHHHHHHHhcC--CCEEEEEcc-------CCCCC-CCCCCCcHHHHHHHHHHHHHCCCCceeccccc
Confidence 999999999999999999998863 334443321 11222 235567899999999999875 4332445567
Q ss_pred CCcchHHHHhcCCCeEE----EccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 375 ASTDARYFRERGLPAIG----FSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 375 g~tD~~~~~~~gip~v~----~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
|+||++++...|+|++. |||+... .+|++||+++++++.+++++|..++..++.
T Consensus 413 ggtDa~~~~~~gip~~~~~~i~gp~~~~--~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 413 GATDGRYLRAAGIPTYGVSGLFGDPDDT--FAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cccchHHHHhcCCCceeecCcccCcccc--cCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 89999999999999984 6766554 799999999999999999999999998854
No 10
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.9e-55 Score=435.90 Aligned_cols=368 Identities=21% Similarity=0.305 Sum_probs=299.4
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC-C
Q 013368 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-S 107 (444)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~-~ 107 (444)
++++++++|++|||.| ++|.+++++|.++|+++|++++.++. .+++|+++.+ |. +.|+|+|+||+||||.++ +
T Consensus 3 ~~~~~l~~Lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~n~~~~~-g~--~~~~i~l~~H~D~Vp~g~~~ 76 (375)
T PRK13009 3 DVLELAQDLIRRPSVT--PDDAGCQDLLAERLEALGFTCERMDF-GDVKNLWARR-GT--EGPHLCFAGHTDVVPPGDLE 76 (375)
T ss_pred hHHHHHHHHhCCCCCC--CchhhHHHHHHHHHHHcCCeEEEecc-CCCcEEEEEe-cC--CCCEEEEEeecccCCCCCcc
Confidence 5789999999999997 57889999999999999999886654 3578999987 54 348999999999999976 7
Q ss_pred CCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccc--ccC
Q 013368 108 KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--NSL 185 (444)
Q Consensus 108 ~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~~~ 185 (444)
.|+++||.++++ ||++||||++|||++++++|.|++.|++.+.+++++|.|+++++||.++..|++.+++.... ...
T Consensus 77 ~w~~~Pf~~~~~-~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~ 155 (375)
T PRK13009 77 AWTSPPFEPTIR-DGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKI 155 (375)
T ss_pred cCCCCCCCcEEE-CCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCC
Confidence 899999999997 99999999999999999999999999988777889999999999998655699998764211 135
Q ss_pred ceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCC
Q 013368 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264 (444)
Q Consensus 186 d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~ 264 (444)
|++++.+.....+.+ ..++.+++|..+++|+++|+++|++.|+.+ ||+..+++++..|..+.... . ...-.
T Consensus 156 d~~i~~ep~~~~~~~-~~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~------~-~~~~~ 227 (375)
T PRK13009 156 DYCIVGEPTSTERLG-DVIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDE------G-NEFFP 227 (375)
T ss_pred CEEEEcCCCcccCCC-CeEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccC------C-CccCC
Confidence 777766432111111 247889999999999999999999999988 99999999999997643210 0 00112
Q ss_pred ceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCcc
Q 013368 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILT 344 (444)
Q Consensus 265 ~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 344 (444)
.++++++.|++|.. ..|+||++|++.+|+|++|.++.+++.++|++.++.. +.+++++.. ....|..
T Consensus 228 ~~~~~i~~i~~G~~-----~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~--~~~~~~~~~-----~~~~p~~- 294 (375)
T PRK13009 228 PTSLQITNIDAGTG-----ATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDKH--GLDYTLEWT-----LSGEPFL- 294 (375)
T ss_pred CceEEEEEEecCCC-----CCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCCeEEEEe-----cCCCccc-
Confidence 35789999998742 6799999999999999999999999999999888632 345555431 1233433
Q ss_pred ccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 013368 345 ATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESI 424 (444)
Q Consensus 345 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 424 (444)
.+ ++++++.+.+++++..+..+.+...+|+||++++...|+|++.|||+.. .+|++||+++++++.+++++|..+
T Consensus 295 -~~-~~~~~~~l~~a~~~~~g~~~~~~~~~g~tda~~~~~~g~p~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~~~~~~ 369 (375)
T PRK13009 295 -TP-PGKLVDAVVAAIEAVTGITPELSTSGGTSDARFIADYGAQVVEFGPVNA---TIHKVNECVSVADLEKLTRIYERI 369 (375)
T ss_pred -CC-CcHHHHHHHHHHHHHhCCCceeeccCCCccHHHHHHcCCCeEEeccCcc---cCCCCCCcEEHHHHHHHHHHHHHH
Confidence 23 3899999999999876654355566788999999999999999999964 599999999999999999999999
Q ss_pred HHHHH
Q 013368 425 IKAYA 429 (444)
Q Consensus 425 l~~l~ 429 (444)
+.++.
T Consensus 370 ~~~~~ 374 (375)
T PRK13009 370 LERLL 374 (375)
T ss_pred HHHHh
Confidence 98875
No 11
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=3.7e-56 Score=443.00 Aligned_cols=365 Identities=20% Similarity=0.344 Sum_probs=298.2
Q ss_pred HHHHhhhcccCCC-CCCChhHHHHHHHHHHHHCCCceEEEeecCCCC----eEEEEecCCCCCCCcEEEEeecccccCCC
Q 013368 32 ERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALSLESQTLEFAKNKP----LILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (444)
Q Consensus 32 ~~l~~l~~i~s~s-~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~----nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~ 106 (444)
++|++|++|||+| ++++|.++++||+++|+++|++++.++...+.. |+++.+.|.+ ..|+|+|+|||||||.++
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ill~~H~DtVp~~~ 80 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNG-NEKSLIFNGHYDVVPAGD 80 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCC-CCCEEEEecccccccCCC
Confidence 6799999999976 357899999999999999999988765432333 3677777653 358999999999999975
Q ss_pred -CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccC
Q 013368 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (444)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (444)
++|+++||++.++ +|++||||++|||++++++|.|++.|.+.+..++++|.|+|+++||.|+ .|++.+++++.+++.
T Consensus 81 ~~~w~~~Pf~~~~~-~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-~G~~~~~~~~~~~~~ 158 (375)
T TIGR01910 81 LELWKTDPFKPVEK-DGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGE-AGTLYLLQRGYFKDA 158 (375)
T ss_pred hhhCcCCCCCcEEE-CCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCc-hhHHHHHHcCCCCCC
Confidence 8999999999997 9999999999999999999999999999877789999999999999886 699999988766556
Q ss_pred ceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCC
Q 013368 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264 (444)
Q Consensus 186 d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~ 264 (444)
|++++.+ |++...++.+++|..+++|+++|+++|+|.|+.+ ||+..+++++++|..+.....+.... .....
T Consensus 159 d~~i~~~-----~~~~~~v~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~--~~~~~ 231 (375)
T TIGR01910 159 DGVLIPE-----PSGGDNIVIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSY--GFIPG 231 (375)
T ss_pred CEEEECC-----CCCCCceEEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc--cccCC
Confidence 8777764 4434678899999999999999999999999988 99999999999998764321110000 01123
Q ss_pred ceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCC--CCceEEEeecccccccCCCCC
Q 013368 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPAS--RNMTFEFKQRASLHDKFGRPI 342 (444)
Q Consensus 265 ~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~ 342 (444)
.++++++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++... .++++++... ...|.
T Consensus 232 ~~t~~i~~i~gG~------~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~ 299 (375)
T TIGR01910 232 PITFNPGVIKGGD------WVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPV------VKWSG 299 (375)
T ss_pred CccccceeEECCC------CcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCe------eeecC
Confidence 5789999999987 89999999999999999999999999999999887432 3444444321 12231
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013368 343 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 420 (444)
Q Consensus 343 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~ 420 (444)
....+.++++++++.+++++..+..+.+...+|+||++++++.|+|++.|||+... .+|++||+++++++.+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 300 PNETPPDSRLVKALEAIIKKVRGIEPEVLVSTGGTDARFLRKAGIPSIVYGPGDLE--TAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred CcCCCCCCHHHHHHHHHHHHHhCCCCeEeeeccchhHHHHHHcCCcEEEECCCCcc--ccCCCCceeEHHHHHHHhhC
Confidence 12467789999999999998755443555677999999999999999999998543 69999999999999998864
No 12
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=5.6e-55 Score=433.86 Aligned_cols=365 Identities=21% Similarity=0.307 Sum_probs=296.3
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC-CCC
Q 013368 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKW 109 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~-~~W 109 (444)
+++|++|++|||+| ++|.++++||.++|+++||+++.++.. +++|+++.+ |. +.|+|+|+||+||||.++ +.|
T Consensus 2 ~~~l~~lv~ips~s--~~e~~~~~~i~~~l~~~G~~~~~~~~~-~~~~~~~~~-g~--~~~~i~~~~H~DtVp~~~~~~W 75 (370)
T TIGR01246 2 TELAKELISRPSVT--PNDAGCQDIIAERLEKLGFEIEWMHFG-DTKNLWATR-GT--GEPVLAFAGHTDVVPAGPEEQW 75 (370)
T ss_pred hHHHHHHhcCCCCC--cchHHHHHHHHHHHHHCCCEEEEEecC-CCceEEEEe-cC--CCcEEEEEccccccCCCCcccc
Confidence 57899999999997 678899999999999999998866543 567999986 43 348999999999999986 789
Q ss_pred ccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccc--cccCce
Q 013368 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV--FNSLNV 187 (444)
Q Consensus 110 ~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~--~~~~d~ 187 (444)
+++||++..+ ||++||||++|||+++++++.|++.+.+.+.+++++|+|+|+++||.++..|++.+++... ....|+
T Consensus 76 ~~~p~~~~~~-dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~ 154 (370)
T TIGR01246 76 SSPPFEPVER-DGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDY 154 (370)
T ss_pred ccCCCCcEEE-CCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCE
Confidence 9999999987 9999999999999999999999999988877788999999999999875469999886421 113577
Q ss_pred EEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCce
Q 013368 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVV 266 (444)
Q Consensus 188 ~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~ 266 (444)
+++.+.+...+.+ ..++.+++|..+++++++|+++|++.|+.+ ||+..+++++..|..+... .. ......+
T Consensus 155 ~i~~ep~~~~~~~-~~i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~------~~-~~~~~~~ 226 (370)
T TIGR01246 155 CIVGEPSSVKKLG-DVIKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWD------EG-NEFFPPT 226 (370)
T ss_pred EEEcCCCCcccCC-ceEEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhc------cC-CccCCCC
Confidence 7776532211111 247889999999999999999999999988 9999999999998764211 00 0011235
Q ss_pred eeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCcccc
Q 013368 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTAT 346 (444)
Q Consensus 267 t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 346 (444)
+++++.+++|.. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. +++++++.. ....|.. .
T Consensus 227 t~~i~~i~~g~~-----~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~--~~~~~v~~~-----~~~~p~~--~ 292 (370)
T TIGR01246 227 SLQITNIHAGTG-----ANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQH--GLDYDLEWS-----LSGEPFL--T 292 (370)
T ss_pred ceEeeeeecCCC-----CCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHc--CCCEEEEEe-----cCCccee--C
Confidence 899999998852 5799999999999999999999999999999888632 345555431 1233332 3
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 426 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~ 426 (444)
+ ++++++.+.+++++..+..+.+...+|++|++++...|+|++.|||+.. .+|++||+++++++.+++++|..++.
T Consensus 293 ~-~~~~~~~~~~a~~~~~g~~~~~~~~~g~~d~~~~~~~g~p~~~~Gp~~~---~~H~~~E~i~i~~l~~~~~~~~~~l~ 368 (370)
T TIGR01246 293 N-DGKLIDKAREAIEETNGIKPELSTGGGTSDGRFIALMGAEVVEFGPVNA---TIHKVNECVSIEDLEKLSDVYQDLLE 368 (370)
T ss_pred C-CCHHHHHHHHHHHHHhCCCCceecCCCCchHHHHHHcCCCEEEecCCcc---cCCCCCceeEHHHHHHHHHHHHHHHH
Confidence 4 8999999999999876654355566788999999999999999999975 48999999999999999999999997
Q ss_pred HH
Q 013368 427 AY 428 (444)
Q Consensus 427 ~l 428 (444)
+|
T Consensus 369 ~~ 370 (370)
T TIGR01246 369 NL 370 (370)
T ss_pred hC
Confidence 64
No 13
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-54 Score=442.43 Aligned_cols=390 Identities=19% Similarity=0.263 Sum_probs=303.6
Q ss_pred CCCChhHHHHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCCCCCcEEEEe
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~----~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~ 97 (444)
.+.+.++.+++|++|++|||+|+. +++.++++||+++|+++|++ ++..+. .+++||++.+.|. ++.|+|+|+|
T Consensus 9 ~~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~-~~~~~l~a~~~~~-~~~~~lll~g 86 (456)
T PRK08201 9 LRERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMET-AGHPIVYADWLHA-PGKPTVLIYG 86 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEec-CCCCEEEEEecCC-CCCCEEEEEe
Confidence 455778999999999999999842 24678999999999999997 444443 3678999988654 3458999999
Q ss_pred ecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHH
Q 013368 98 HTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (444)
Q Consensus 98 H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (444)
|+||||+++ +.|+++||++.++ ||+|||||++||||+++++|.|++.|++.+..++++|.|++++|||.|+ .|+..+
T Consensus 87 H~DvVp~~~~~~W~~dPf~~~~~-~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~~~~ 164 (456)
T PRK08201 87 HYDVQPVDPLNLWETPPFEPTIR-DGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGS-PNLDSF 164 (456)
T ss_pred ccCCcCCCchhcccCCCCceEeE-CCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCC-ccHHHH
Confidence 999999986 6799999999998 9999999999999999999999999988766778899999999999987 688888
Q ss_pred Hhcc--ccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCC--ccCCCC-CC-CHHHHHHHHHHHHHhchhh
Q 013368 177 ADSH--VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPG--HGAKLY-DN-SAMENLFKSIESVRRFRAS 250 (444)
Q Consensus 177 ~~~~--~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~--Hs~~p~-~g-nai~~~~~~i~~l~~l~~~ 250 (444)
+++. .+. .|++++.+.+...++. ..+++++||.++++|+++|+++ |||.|. .+ |||..++++++.|.++...
T Consensus 165 l~~~~~~~~-~d~~ii~e~~~~~~~~-~~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~ 242 (456)
T PRK08201 165 VEEEKDKLA-ADVVLISDTTLLGPGK-PAICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGT 242 (456)
T ss_pred HHhhHHhcc-CCEEEEeCCCcCCCCC-EEEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCC
Confidence 8753 233 4778887754332322 4699999999999999999998 998765 45 9999999999999764210
Q ss_pred ----------------hhHHHH----------hc-----hh---------ccCCceeeeeeeeccCCCCCCCcccccccC
Q 013368 251 ----------------QFDLVK----------AG-----LK---------AEGEVVSVNMAFLKAGTPSPNGFVMNLQPS 290 (444)
Q Consensus 251 ----------------~~~~~~----------~~-----~~---------~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~ 290 (444)
.+..+. +. .. .....+|++++.++||.. +++..|+||+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~--~~~~~NvVP~ 320 (456)
T PRK08201 243 VAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQ--GEGTKTVIPA 320 (456)
T ss_pred EecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCC--CCCCceEECc
Confidence 000000 00 00 001135889999998862 3335799999
Q ss_pred ceEEEEEeecCCCCCHHHHHHHHHHHhccC-CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCC
Q 013368 291 EAEAGFDIRVPPTTDAESLERRIVEEWAPA-SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGK 369 (444)
Q Consensus 291 ~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~ 369 (444)
+|++.+|+|++|.++.+++.++|+++++.. ..++++++.. ....|++ .++.++++++++.+++++..+..+.
T Consensus 321 ~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~~~~~~v~~~~------~~~~~~~-~~~~~~~~~~~l~~a~~~~~g~~~~ 393 (456)
T PRK08201 321 EAHAKITCRLVPDQDPQEILDLIEAHLQAHTPAGVRVTIRR------FDKGPAF-VAPIDHPAIQAAARAYEAVYGTEAA 393 (456)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCCeEEEEEE------CCCcCce-ecCCCCHHHHHHHHHHHHHhCCCce
Confidence 999999999999999999999999988742 2334555442 1233443 3677899999999999988665422
Q ss_pred ceeecCCc---chHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 370 PEIFPAST---DARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 370 ~~~~~g~t---D~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
....|++ |+.+....|+|++.||||... .++|++||+++++++.+++++|..++.+++
T Consensus 394 -~~~~gg~~~~~~~~~~~~gip~v~~GpG~~~-~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 394 -FTRMGGSIPVVETFSSQLHIPIVLMGFGLPS-ENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred -ecCCCCcHHHHHHHHHHhCCCEEEecCCCCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2234455 577777789999999999532 269999999999999999999999999884
No 14
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.5e-54 Score=433.22 Aligned_cols=367 Identities=21% Similarity=0.247 Sum_probs=295.5
Q ss_pred hHHHHHHHhhhcccCCCCCCCh-hHHHHHHHHHHHHCCCceEEEeec-CCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 28 DSIIERFRAYLQIDTSQPNPDY-TNASKFILAQAEALSLESQTLEFA-KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e-~~~~~~l~~~l~~~G~~~~~~~~~-~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
.+.+++|++|++|||+| +++ .++++||.++|+++|+++++++.. .+++|+++.+.+. ..|+|+|+||+||||.+
T Consensus 4 ~~~~~~l~~lv~i~S~s--~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~--~~~~ill~~H~Dtv~~~ 79 (385)
T PRK07522 4 MSSLDILERLVAFDTVS--RDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPA--DRGGIVLSGHTDVVPVD 79 (385)
T ss_pred hhHHHHHHHHhCCCCcC--CCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCC--CCCeEEEEeecccccCC
Confidence 56899999999999997 444 599999999999999998765432 2468999998543 24899999999999998
Q ss_pred CCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccc--c
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--N 183 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~ 183 (444)
++.|+.+||++.++ +|++||||++|||++++++|.|++.|.+.+ ++++|.|+|+++||.|+ .|++++++.... .
T Consensus 80 ~~~W~~~pf~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~dEE~g~-~G~~~l~~~~~~~~~ 155 (385)
T PRK07522 80 GQAWTSDPFRLTER-DGRLYGRGTCDMKGFIAAALAAVPELAAAP--LRRPLHLAFSYDEEVGC-LGVPSMIARLPERGV 155 (385)
T ss_pred CCCCCCCCCceEEE-CCEEEeccccccchHHHHHHHHHHHHHhCC--CCCCEEEEEEeccccCC-ccHHHHHHHhhhcCC
Confidence 88899999999997 999999999999999999999999998764 57899999999999886 799999975321 1
Q ss_pred cCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhcc
Q 013368 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (444)
Q Consensus 184 ~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 262 (444)
..|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.+ ||+..+++++..|+++....... .......
T Consensus 156 ~~d~~i~~-----ep~~-~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~~~~ 228 (385)
T PRK07522 156 KPAGCIVG-----EPTS-MRPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAP-GPFDALF 228 (385)
T ss_pred CCCEEEEc-----cCCC-CeeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhc-CCCCcCC
Confidence 24665553 4654 578899999999999999999999998888 99999999999998754321100 0000000
Q ss_pred -CCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc--------CCCCceEEEeeccc
Q 013368 263 -GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--------ASRNMTFEFKQRAS 333 (444)
Q Consensus 263 -~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--------~~~~~~~~~~~~~~ 333 (444)
...++++++.+++|. ..|+||++|++.+|+|+.+.++.+++.++|++.++. ..++++++++.
T Consensus 229 ~~~~~t~~i~~i~gG~------~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~--- 299 (385)
T PRK07522 229 DPPYSTLQTGTIQGGT------ALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP--- 299 (385)
T ss_pred CCCcceeEEeeeecCc------cccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe---
Confidence 123689999999886 889999999999999999999999999999988864 12456666654
Q ss_pred ccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHH
Q 013368 334 LHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAE 413 (444)
Q Consensus 334 ~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~ 413 (444)
....|++ ..+.++++++.+++++.+ . ......+++|+++++..|+|++.|||+... .+|++||++++++
T Consensus 300 ---~~~~~~~-~~~~~~~~v~~~~~~~~~----~-~~~~~~~~td~~~~~~~gip~v~~Gpg~~~--~~H~~~E~i~i~~ 368 (385)
T PRK07522 300 ---LSAYPGL-DTAEDAAAARLVRALTGD----N-DLRKVAYGTEAGLFQRAGIPTVVCGPGSIE--QAHKPDEFVELAQ 368 (385)
T ss_pred ---ccCCCCC-CCCCCcHHHHHHHHHhCC----C-CcceEeeecchHHhccCCCCEEEECCCChh--hCCCCCccccHHH
Confidence 2234443 356678888888765433 2 122356789999999999999999998654 6999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013368 414 YLKGIDIYESIIKAYA 429 (444)
Q Consensus 414 l~~~~~~~~~~l~~l~ 429 (444)
+.+++++|..++..++
T Consensus 369 l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 369 LAACEAFLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 15
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-54 Score=436.90 Aligned_cols=376 Identities=27% Similarity=0.467 Sum_probs=296.3
Q ss_pred HHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC
Q 013368 31 IERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~----~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~ 106 (444)
+++|++|++|||+|+. ++|.++++||.++|+++|++++.++...+++|+++.++|.+++.++|+|+||+||||.++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 6789999999999732 578899999999999999999877655567899999977655457899999999999987
Q ss_pred CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc--cccc
Q 013368 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VFNS 184 (444)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~~~ 184 (444)
+.|+++||++.++ ||++||||++|||++++++|.|++.|++.+..++++|.|+|+++||.|+..|+++++++. .++.
T Consensus 82 ~~W~~~Pf~~~~~-dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 ADWSVHPFSGEIR-DGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred ccCccCCCCceee-CCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 7899999999997 999999999999999999999999999988888999999999999998756999998753 2332
Q ss_pred CceEEEeccCCC-----CcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhh--------
Q 013368 185 LNVGIVLDEGLA-----STTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQ-------- 251 (444)
Q Consensus 185 ~d~~~~~~~g~~-----~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~-------- 251 (444)
.+ .++.+.+.. .+.....++.+++|..+++|+++|+++|+|.|+..||+..+++++..|+++....
T Consensus 161 ~~-~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VT-EAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVNDDNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hh-eEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 22 334333221 1111235889999999999999999999999865599999999999997643210
Q ss_pred -hHHHHh--c----h-------hccC---------CceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHH
Q 013368 252 -FDLVKA--G----L-------KAEG---------EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAES 308 (444)
Q Consensus 252 -~~~~~~--~----~-------~~~~---------~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~ 308 (444)
++.+.. + . ...+ ..+|++++.|+||. +.|+||++|++.+|+|+.|.++ ++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~------~~NviP~~~~~~~d~R~~p~~~-~~ 312 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGY------KVNVIPGTAEAVVDGRFLPGRE-EE 312 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccC------ccccCCCceEEEEEEeECCCCc-HH
Confidence 000000 0 0 0000 13689999999987 8899999999999999999886 77
Q ss_pred HHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCC-CCCceeecCCcchHHHHhcCC
Q 013368 309 LERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK-LGKPEIFPASTDARYFRERGL 387 (444)
Q Consensus 309 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~-~~~~~~~~g~tD~~~~~~~gi 387 (444)
+.+.|++++. ..+++++.. . .|++ .++.++++++.+.+++++..+. .+.+...+|+||++++...|+
T Consensus 313 i~~~i~~~~~---~~v~~~~~~-------~-~~~~-~~~~~~~~v~~l~~a~~~~~~~~~~~~~~~~ggtDa~~~~~~g~ 380 (426)
T PRK07906 313 FLATVDELLG---PDVEREWVH-------R-DPAL-ETPFDGPLVDAMNAALLAEDPGARVVPYMLSGGTDAKAFSRLGI 380 (426)
T ss_pred HHHHHHHHhC---CCeEEEEec-------C-CCCC-CCCCCcHHHHHHHHHHHHHCCCCeEeeeeecccCcHHHHHhcCC
Confidence 8888877663 234444332 2 3333 3567899999999999988532 223445678999999999999
Q ss_pred CeEEEccCCCC-----CCCCCCCCccccHHHHHHHHHHHHHHHHH
Q 013368 388 PAIGFSPMANT-----PILLHDHNEFLNQAEYLKGIDIYESIIKA 427 (444)
Q Consensus 388 p~v~~gp~~~~-----~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 427 (444)
|++.|||+... ...+|++||+++++++.+++++|..++..
T Consensus 381 p~~~~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 381 RCYGFAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred ceEEEeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 99999997521 13699999999999999999999999875
No 16
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.5e-54 Score=430.09 Aligned_cols=357 Identities=20% Similarity=0.265 Sum_probs=288.2
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC--CCCeEEEEecCCCCCCCcEEEEeecccccCCCCCC
Q 013368 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKW 109 (444)
Q Consensus 32 ~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W 109 (444)
++|++|++|||+|+ .++.++++||+++|+++|++++.++... +++|+++.+.++ +.++|+|+||+||||.+++.|
T Consensus 1 ~~l~~lv~i~S~s~-~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~--~~~~i~l~~H~Dtvp~~~~~w 77 (364)
T TIGR01892 1 EILTKLVAFDSTSF-RPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPS--GAGGLALSGHTDVVPYDDAAW 77 (364)
T ss_pred ChHHHhhCcCCcCC-ccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCC--CCCeEEEEcccccccCCCCcC
Confidence 46899999999973 2346899999999999999988765432 368999998543 347899999999999988899
Q ss_pred ccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEE
Q 013368 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGI 189 (444)
Q Consensus 110 ~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~ 189 (444)
+++||++.++ +|++||||++|||++++++|.|++.|++.+ ++++|.|+|+++||.|+ .|++++++++.+. .|+++
T Consensus 78 ~~~Pf~~~~~-~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~-~G~~~~~~~~~~~-~d~~i 152 (364)
T TIGR01892 78 TRDPFRLTEK-DGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGC-TGAPKMIEAGAGR-PRHAI 152 (364)
T ss_pred CCCCCcceee-CCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCC-cCHHHHHHhcCCC-CCEEE
Confidence 9999999997 999999999999999999999999998753 67899999999999985 7999999876543 47666
Q ss_pred EeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceee
Q 013368 190 VLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSV 268 (444)
Q Consensus 190 ~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~ 268 (444)
+. +|++ ..++.+++|..+++|+++|+++|++.|+.| ||+..+++++..|..+....... ..........+++
T Consensus 153 ~~-----ep~~-~~~~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~~~~~~~~~~ 225 (364)
T TIGR01892 153 IG-----EPTR-LIPVRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLRE-DLDEGFTPPYTTL 225 (364)
T ss_pred EC-----CCCC-ceeEEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccC-CCCccCCCCCceE
Confidence 54 4654 456678999999999999999999999998 99999999999998764311000 0000000124689
Q ss_pred eeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC---CCCceEEEeecccccccCCCCCccc
Q 013368 269 NMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA---SRNMTFEFKQRASLHDKFGRPILTA 345 (444)
Q Consensus 269 ~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~ 345 (444)
+++.+++|. ..|+||++|++.+|+|+.|.++.+++.++|+++++.. .++++++++. ....|++ .
T Consensus 226 ~i~~i~gg~------~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~------~~~~~~~-~ 292 (364)
T TIGR01892 226 NIGVIQGGK------AVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV------VSTDPGV-N 292 (364)
T ss_pred EEeeeecCC------CCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE------ccCCCCc-C
Confidence 999999987 8999999999999999999999999999999888642 3456666553 1234443 3
Q ss_pred cCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 013368 346 TDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESI 424 (444)
Q Consensus 346 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 424 (444)
.++++++++++.+++.. . +...+++||++++...|+|++.|||+... .+|++||+++++++.+++++|+.+
T Consensus 293 ~~~~~~~v~~~~~~~~~----~--~~~~~~~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 293 TEPDAELVAFLEELSGN----A--PEVVSYGTEAPQFQELGAEAVVCGPGDIR--QAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred CCCCCHHHHHHHHHhCC----C--CceecccccHHHHHhCCCcEEEECCCChH--hCCCCCceeeHHHHHHHHHHHHHh
Confidence 56688999888765422 2 23456789999999999999999999743 699999999999999999999876
No 17
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-54 Score=435.21 Aligned_cols=382 Identities=19% Similarity=0.238 Sum_probs=296.1
Q ss_pred hHHHHHHHhhhcccCCCCCCC-hhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC
Q 013368 28 DSIIERFRAYLQIDTSQPNPD-YTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~-e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~ 106 (444)
++.+++|++|++|||+|+.++ +.++++||.++|+++|++++.++.. +++|+++.+.+ + .+|+|+|+||+||||.++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~-~~~~lia~~~~-~-~~~~vll~gH~DvVp~~~ 78 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTK-GHPVVYGEINV-G-AKKTLLIYNHYDVQPVDP 78 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecC-CCCEEEEEecC-C-CCCEEEEEecccCCCCCc
Confidence 578999999999999984322 2789999999999999999876653 67899999853 2 358999999999999987
Q ss_pred -CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc--ccc
Q 013368 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VFN 183 (444)
Q Consensus 107 -~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~~ 183 (444)
+.|+++||++.++ ||+|||||++|||++++++|.|++.|++.+ .++.+|.|+|+++||.|+ .|++.++++. .++
T Consensus 79 ~~~W~~~Pf~~~~~-dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~-~g~~~~l~~~~~~~~ 155 (436)
T PRK06446 79 LSEWKRDPFSATIE-NGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGS-PNLEDFIEKNKNKLK 155 (436)
T ss_pred cccccCCCCceEEE-CCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCC-HhHHHHHHHHHHHhC
Confidence 8899999999998 999999999999999999999999987765 578899999999999987 6888888753 233
Q ss_pred cCceEEEeccCCCCcCCcceeeecccccEEEEEEEee--cCCccCCCCCC-CHHHHHHHHHHHHHhchh-----------
Q 013368 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAKLYDN-SAMENLFKSIESVRRFRA----------- 249 (444)
Q Consensus 184 ~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~----------- 249 (444)
.|+++ ++.....+++...++.+++|..+++++++| +++|||.|+.+ ||+..+++++++|.++..
T Consensus 156 -~d~vi-~E~~~~~~~~~~~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~ 233 (436)
T PRK06446 156 -ADSVI-MEGAGLDPKGRPQIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDV 233 (436)
T ss_pred -CCEEE-ECCCCccCCCCeEEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCC
Confidence 57654 443333244445799999999999999999 99999998888 999999999999976421
Q ss_pred -----hhhHHHH----------h--c------------hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeec
Q 013368 250 -----SQFDLVK----------A--G------------LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRV 300 (444)
Q Consensus 250 -----~~~~~~~----------~--~------------~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~ 300 (444)
.....+. . + .......+|+|++.+++|.. ++...|+||++|++++|+|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~--~~~~~nvvP~~a~~~~d~R~ 311 (436)
T PRK06446 234 RELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYT--GKGSKTIVPSRAFAKLDFRL 311 (436)
T ss_pred CCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeecccc--CCCCCcEecCceEEEEEEEc
Confidence 0000000 0 0 00011247899999988752 22267999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCce-eecCCcch
Q 013368 301 PPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPE-IFPASTDA 379 (444)
Q Consensus 301 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~-~~~g~tD~ 379 (444)
+|.++.+++.++|+++++.....+++++.. ...|.. ++.++++++++.+++++..+..+... ..+|++|+
T Consensus 312 ~p~~~~~~v~~~l~~~~~~~~~~~~~~~~~-------~~~p~~--~~~~~~~v~~l~~a~~~~~g~~~~~~~~~~g~~d~ 382 (436)
T PRK06446 312 VPNQDPYKIFELLKKHLQKVGFNGEIIVHG-------FEYPVR--TSVNSKVVKAMIESAKRVYGTEPVVIPNSAGTQPM 382 (436)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCeEEEEcC-------Ccceee--cCCCCHHHHHHHHHHHHHhCCCCceecCCCCcchH
Confidence 999999999999999987432333343331 233433 56789999999999999865432332 23466788
Q ss_pred HHHHh-cCCCeE--EEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 380 RYFRE-RGLPAI--GFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 380 ~~~~~-~gip~v--~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
++|.. .|+|++ .|||+... .++|++||+++++++.+++++|..++..++
T Consensus 383 ~~~~~~~gip~v~~~~g~g~~~-~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 383 GLFVYKLGIRDIVSAIGVGGYY-SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred HHHHHHhCCCcceeecccCCCC-cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 88755 799976 36665432 379999999999999999999999998775
No 18
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=6.7e-54 Score=429.73 Aligned_cols=377 Identities=24% Similarity=0.367 Sum_probs=303.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecCC--------CCeEEEEecCCCCCCCcEE
Q 013368 24 AKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKN--------KPLILLKWPGSNPQLPSIL 94 (444)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~--------~~nl~~~~~g~~~~~~~i~ 94 (444)
++..++.+++|++|++|||+|++ +++.++++||.++|+++|++++..+...+ ++|+++.. +. +.|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~il 78 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARR-GS--GNPHLH 78 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEe-CC--CCceEE
Confidence 34568999999999999999854 45778999999999999999887654322 35678765 33 238999
Q ss_pred EEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHH
Q 013368 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (444)
Q Consensus 95 l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (444)
|+||+||||..+..|+.+||+++++ +|++||||++|||++++++|.|++.|++.+ +++|.|+|+++||.|+ .|++
T Consensus 79 l~~HlDtvp~~~~~~~~~Pf~~~~~-~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~-~G~~ 153 (394)
T PRK08651 79 FNGHYDVVPPGEGWSVNVPFEPKVK-DGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGG-TGTG 153 (394)
T ss_pred EEeeeeeecCCCCccccCCCCcEEE-CCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccc-hhHH
Confidence 9999999999854479999999997 999999999999999999999999998765 7999999999999986 7999
Q ss_pred HHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhH
Q 013368 175 KFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFD 253 (444)
Q Consensus 175 ~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~ 253 (444)
++++++.++ .|++++.+ |++...++.+++|..+++|+++|+++|++.|+.+ ||+..++++++.|.++......
T Consensus 154 ~~~~~~~~~-~d~~i~~~-----~~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 227 (394)
T PRK08651 154 YLVEEGKVT-PDYVIVGE-----PSGLDNICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKS 227 (394)
T ss_pred HHHhccCCC-CCEEEEec-----CCCCCceEEecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhc
Confidence 999876554 47677664 4442368889999999999999999999999988 9999999999999765321110
Q ss_pred HHHhchhccCCceeeeeee--eccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEe
Q 013368 254 LVKAGLKAEGEVVSVNMAF--LKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFK 329 (444)
Q Consensus 254 ~~~~~~~~~~~~~t~~~~~--i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~ 329 (444)
... -.......++++++. +++|. ..|+||++|++.+|+|+.+.++.+++.++|+++++.. ..++++++.
T Consensus 228 ~~~-~~~~~~~~~~~~ig~~~i~gG~------~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~ 300 (394)
T PRK08651 228 KYE-YDDERGAKPTVTLGGPTVEGGT------KTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFE 300 (394)
T ss_pred ccc-ccccccCCCceeecceeeeCCC------CCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEE
Confidence 000 000112235677777 88876 8999999999999999999999999999999888642 234555555
Q ss_pred ecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccc
Q 013368 330 QRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFL 409 (444)
Q Consensus 330 ~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i 409 (444)
. ....|+. ..+.++++++.+.++++++.+..+.+....|+||+++|+..|+|++.|||+... .+|++||++
T Consensus 301 ~------~~~~~~~-~~~~~~~l~~~~~~a~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~Gpg~~~--~~H~~~E~i 371 (394)
T PRK08651 301 I------TPFSEAF-VTDPDSELVKALREAIREVLGVEPKKTISLGGTDARFFGAKGIPTVVYGPGELE--LAHAPDEYV 371 (394)
T ss_pred E------ecccCCc-cCCCCCHHHHHHHHHHHHHhCCCCceeeecCcccHHHHhhCCCcEEEECCCChH--hcCCCCcee
Confidence 3 1223333 356688999999999999655443556677999999999999999999998643 699999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHc
Q 013368 410 NQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 410 ~~~~l~~~~~~~~~~l~~l~~ 430 (444)
+++++.+++++|.+++.+|++
T Consensus 372 ~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 372 EVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred EHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999854
No 19
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4e-54 Score=429.73 Aligned_cols=368 Identities=21% Similarity=0.293 Sum_probs=294.4
Q ss_pred hHHHHHHHhhhcccCCCCCC-----ChhHHHHHHHHHHHHCCCceEEEeec--CCCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 28 DSIIERFRAYLQIDTSQPNP-----DYTNASKFILAQAEALSLESQTLEFA--KNKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~-----~e~~~~~~l~~~l~~~G~~~~~~~~~--~~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
+++++++++|++|||+|+.. ++.++++||.++|+++|++++.++.. .+++|+++++ |.+ .++|+|+||+|
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~-g~~--~~~il~~~H~D 81 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASL-GSG--EGGLLLAGHTD 81 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEe-CCC--CCeEEEEeeec
Confidence 47999999999999998432 24679999999999999998876542 2567999998 543 25799999999
Q ss_pred cccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc
Q 013368 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (444)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (444)
|||.+++.|+.+||++.++ ||++||||++||||+++++|.|++.|++.+ ++++|.|+|+++||.|+ .|++++++++
T Consensus 82 vvp~~~~~W~~~Pf~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~g~-~G~~~~~~~~ 157 (383)
T PRK05111 82 TVPFDEGRWTRDPFTLTEH-DGKLYGLGTADMKGFFAFILEALRDIDLTK--LKKPLYILATADEETSM-AGARAFAEAT 157 (383)
T ss_pred eecCCCCcCcCCCCccEEE-CCEEEecccccccHHHHHHHHHHHHHhhcC--CCCCeEEEEEeccccCc-ccHHHHHhcC
Confidence 9999877899999999997 999999999999999999999999998653 67899999999999986 6999999876
Q ss_pred ccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhch
Q 013368 181 VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (444)
Q Consensus 181 ~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~ 259 (444)
.++ .|++++. +|+. ..++++++|..+++|+++|+++|+|.|+.| ||+..+++++..|..+....-+... .+
T Consensus 158 ~~~-~d~~i~~-----ep~~-~~~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~-~~ 229 (383)
T PRK05111 158 AIR-PDCAIIG-----EPTS-LKPVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYH-NP 229 (383)
T ss_pred CCC-CCEEEEc-----CCCC-CceeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCC-Cc
Confidence 554 4766654 4654 456789999999999999999999999998 9999999999999876421100000 00
Q ss_pred hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeeccccccc
Q 013368 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDK 337 (444)
Q Consensus 260 ~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 337 (444)
......+|++++.++||. ..|+||++|++.+|+|+.|.++.+++.++|++.++.. ..+.++++... .
T Consensus 230 ~~~~~~~t~~i~~i~gg~------~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~-----~ 298 (383)
T PRK05111 230 AFTVPYPTLNLGHIHGGD------APNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL-----H 298 (383)
T ss_pred cCCCCCCceeEeeeecCC------cCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc-----c
Confidence 000135789999999987 8899999999999999999999999999999888642 23455555421 1
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHH
Q 013368 338 FGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKG 417 (444)
Q Consensus 338 ~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~ 417 (444)
...|++ ..+.++++++.+.+++ +.. +...++++|+.++...|+|++.|||+... .+|++||+++++++.++
T Consensus 299 ~~~~~~-~~~~~~~l~~~~~~~~----g~~--~~~~~~~~Da~~~~~~g~p~v~~G~g~~~--~~H~~~E~v~~~~l~~~ 369 (383)
T PRK05111 299 PPIPGY-ECPADHQLVRVVEKLL----GHK--AEVVNYCTEAPFIQQLGCPTLVLGPGSIE--QAHQPDEYLELSFIKPT 369 (383)
T ss_pred cCCCCc-CCCCCCHHHHHHHHHh----CCC--CceeeeeccHHHHHhcCCCEEEECCCchH--hCcCCCCcccHHHHHHH
Confidence 233433 3556788888876654 222 22346789999999999999999998643 69999999999999999
Q ss_pred HHHHHHHHHHHHc
Q 013368 418 IDIYESIIKAYAS 430 (444)
Q Consensus 418 ~~~~~~~l~~l~~ 430 (444)
+++|..++.+++.
T Consensus 370 ~~i~~~~~~~~~~ 382 (383)
T PRK05111 370 RELLRQLIHHFCL 382 (383)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998854
No 20
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=5.4e-54 Score=430.48 Aligned_cols=381 Identities=17% Similarity=0.189 Sum_probs=303.7
Q ss_pred cCCCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 21 SSPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 21 ~~~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
++.+++.+++++++++|++|||+| ++|.+++++|.++|+++|+++..++ ..+|+++.+.+. .|+|+|++|+|
T Consensus 8 ~~~~~~~~~~~~~l~~lv~ips~s--~~e~~~a~~l~~~l~~~G~~~~~~~---~~~n~~a~~~~~---~~~i~~~~H~D 79 (399)
T PRK13004 8 MLAEKYKADMTRFLRDLIRIPSES--GDEKRVVKRIKEEMEKVGFDKVEID---PMGNVLGYIGHG---KKLIAFDAHID 79 (399)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCcEEEEc---CCCeEEEEECCC---CcEEEEEeccC
Confidence 345667789999999999999996 7889999999999999999865443 456999988542 38999999999
Q ss_pred cccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhc
Q 013368 101 VVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (444)
Q Consensus 101 tvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (444)
|||.++ +.|+++||++.++ +|++||||++|||++++++|.|++.|++.+..++++|.++|+++||.++..|+++++++
T Consensus 80 tVp~~~~~~w~~~P~~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~ 158 (399)
T PRK13004 80 TVGIGDIKNWDFDPFEGEED-DGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEE 158 (399)
T ss_pred ccCCCChhhcccCCCccEEE-CCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHh
Confidence 999875 7899999999997 99999999999999999999999999998877889999999999996432578888876
Q ss_pred cccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhc
Q 013368 180 HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (444)
Q Consensus 180 ~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~ 258 (444)
..+. .|++++.+ |+. ..++++++|..+++|+++|+++|+|.|+.| ||+..+++++..|..+..... .
T Consensus 159 ~~~~-~d~~i~~e-----~~~-~~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~----~- 226 (399)
T PRK13004 159 DKIK-PDFVVITE-----PTD-LNIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLK----E- 226 (399)
T ss_pred cCCC-CCEEEEcc-----CCC-CceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccc----c-
Confidence 4443 58777764 443 578899999999999999999999999998 999999999999987643210 0
Q ss_pred hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeec-cccc--
Q 013368 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQR-ASLH-- 335 (444)
Q Consensus 259 ~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~-~~~~-- 335 (444)
.......+++++.+.+|. ...|+||++|++.+|+|+.|.++.+++.++|+++.+....+.++++... .+.+
T Consensus 227 -~~~~~~~~~~v~~i~~g~-----~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~v~~~~~~~~~~~~ 300 (399)
T PRK13004 227 -DPFLGKGTLTVSDIFSTS-----PSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAVKKANAKVSMYNYDRPSYTG 300 (399)
T ss_pred -CCcCCCceEEEeeeecCC-----CCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhhccccceEEEecccCCCccc
Confidence 001122468888887663 2789999999999999999999999999999888542222333333210 0000
Q ss_pred ---c-cCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHH-HhcCCCeEEEccCCCCCCCCCCCCcccc
Q 013368 336 ---D-KFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYF-RERGLPAIGFSPMANTPILLHDHNEFLN 410 (444)
Q Consensus 336 ---~-~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~-~~~gip~v~~gp~~~~~~~~H~~~E~i~ 410 (444)
+ ....|++ .+++++++++.+.+++++..+..+.+...++++|++.+ +..|+|++.|||+... .+|++||+++
T Consensus 301 ~~~~~~~~~p~~-~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~td~~~~~~~~Gip~v~~Gpg~~~--~aH~~nE~i~ 377 (399)
T PRK13004 301 LVYPTECYFPTW-LYPEDHEFVKAAVEAYKGLFGKAPEVDKWTFSTNGVSIAGRAGIPTIGFGPGKEP--LAHAPNEYTW 377 (399)
T ss_pred cccccccccccc-ccCCCCHHHHHHHHHHHHHhCCCCeecccccccCCeEEehhcCCCEEEECCCccc--ccCCCCceeE
Confidence 0 0123443 36778999999999999986544344456788888766 4679999999998653 6999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcc
Q 013368 411 QAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 411 ~~~l~~~~~~~~~~l~~l~~~ 431 (444)
++++.+++++|..++..+++.
T Consensus 378 i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 378 KEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999853
No 21
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=8.2e-54 Score=428.59 Aligned_cols=377 Identities=16% Similarity=0.157 Sum_probs=298.8
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccc
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtv 102 (444)
.++..+++++++++|++|||++ ++|.+++++|.++|+++|+++...+ ...|+++.+ |. +.++|+|+||+|||
T Consensus 8 ~~~~~~~~~~~l~~Lv~ips~s--~~e~~~~~~l~~~l~~~g~~~~~~~---~~~~v~~~~-g~--~~~~l~l~~H~DtV 79 (395)
T TIGR03526 8 AEKYRGDMIRFLRDLVAIPSES--GDEGRVALRIKQEMEKLGFDKVEID---PMGNVLGYI-GH--GPKLIAMDAHIDTV 79 (395)
T ss_pred HHHHHHHHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCceEEEc---CCCcEEEEe-CC--CCCEEEEEeecccc
Confidence 4456688999999999999996 6888999999999999999853332 345899987 43 33789999999999
Q ss_pred cCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccc
Q 013368 103 PSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (444)
Q Consensus 103 p~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (444)
|+++ +.|+++||.+.++ ||++||||++|||++++++|.|++.|.+.+..++.++.++++++||.++..|..++++++.
T Consensus 80 p~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYED-EEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDK 158 (395)
T ss_pred CCCCcccccCCCCceEEE-CCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccC
Confidence 9876 7899999999997 9999999999999999999999999998876677899999999999432246777777654
Q ss_pred cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchh
Q 013368 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (444)
Q Consensus 182 ~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~ 260 (444)
+. .|++++. +|+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.... .. ..
T Consensus 159 ~~-~d~~i~~-----ep~~-~~i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~----~~-~~ 226 (395)
T TIGR03526 159 IK-PEFVVIT-----EPTD-MNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANL----VE-DP 226 (395)
T ss_pred CC-CCEEEec-----CCCC-ceEEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhh----cC-Cc
Confidence 44 5777765 3654 578899999999999999999999999999 99999999999998764311 00 00
Q ss_pred ccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeec-cccc----
Q 013368 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQR-ASLH---- 335 (444)
Q Consensus 261 ~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~-~~~~---- 335 (444)
.. ...+++++.+++|.. ..|+||++|++++|+|+.|.++.+++.++|+++++.....+++++... .+.+
T Consensus 227 ~~-~~~~~~v~~i~~g~~-----~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (395)
T TIGR03526 227 FL-GKGTLTVSEIFFSSP-----SRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQGAEAEVEMYEYDRPSYTGLV 300 (395)
T ss_pred cc-CccceeeeeeecCCC-----CCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhcCCcceEEEeccccccccccc
Confidence 11 135789999987642 789999999999999999999999999999988763222333333210 0000
Q ss_pred -c-cCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcch-HHHHhcCCCeEEEccCCCCCCCCCCCCccccHH
Q 013368 336 -D-KFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA-RYFRERGLPAIGFSPMANTPILLHDHNEFLNQA 412 (444)
Q Consensus 336 -~-~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~-~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~ 412 (444)
. ....|++ .++.++++++++.+++++..+..+.....++++|+ .++++.|+|++.|||+... ++|++||+++++
T Consensus 301 ~~~~~~~p~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~p~v~~Gpg~~~--~aH~~dE~i~i~ 377 (395)
T TIGR03526 301 YPTECYFPTW-VLPEDHLITKAALETYKRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDED--QAHAPNEKTWKE 377 (395)
T ss_pred cccccccCcc-ccCCCCHHHHHHHHHHHHHhCCCCceeeeeeecccceehhhcCCCEEEECCcchh--hccCCCceEEHH
Confidence 0 0023333 36778999999999999987765344455677888 5667789999999998643 699999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013368 413 EYLKGIDIYESIIKAYA 429 (444)
Q Consensus 413 ~l~~~~~~~~~~l~~l~ 429 (444)
++.+++++|..++..++
T Consensus 378 ~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03526 378 DLVKAAAMYAAIPTVYL 394 (395)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999886
No 22
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=7.4e-54 Score=429.06 Aligned_cols=376 Identities=15% Similarity=0.164 Sum_probs=297.5
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeeccccc
Q 013368 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (444)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp 103 (444)
++..+++++++++|++|||++ ++|.++++||.++|+++|++...++ .+.|+++.+ |. +.|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~~~~lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~---~~~n~~~~~-g~--~~~~l~l~~H~DtVp 80 (395)
T TIGR03320 9 KKYRGDMIRFLRDLVAIPSES--GDEKRVAERIKEEMEKLGFDKVEID---PMGNVLGYI-GH--GPKLIAMDAHIDTVG 80 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCCC--CchHHHHHHHHHHHHHhCCcEEEEC---CCCCEEEEe-CC--CCcEEEEEecccccC
Confidence 445688999999999999986 6788999999999999999753332 346899987 43 237899999999999
Q ss_pred CCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccc
Q 013368 104 SEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (444)
Q Consensus 104 ~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (444)
+++ +.|+++||.+.++ ||++||||++|||++++++|.|++.|++.+..++.++.|+++++||.++..+.+++++...+
T Consensus 81 ~~~~~~w~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 81 IGDSKQWQFDPYEGYED-EEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCccccccCCCceEEE-CCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 875 7899999999998 99999999999999999999999999988877788999999999997542345666665434
Q ss_pred ccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhc
Q 013368 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKA 261 (444)
Q Consensus 183 ~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~ 261 (444)
. .|++++.+ |+. ..++.+++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.... ... ..
T Consensus 160 ~-~d~~iv~e-----p~~-~~i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~----~~~-~~ 227 (395)
T TIGR03320 160 K-PEFVVITE-----PTD-MNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANL----VED-PF 227 (395)
T ss_pred C-CCEEEEcC-----CCc-cceEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhh----cCC-cc
Confidence 3 57777754 554 578899999999999999999999999999 99999999999998754311 000 01
Q ss_pred cCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeec-cccc-----
Q 013368 262 EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQR-ASLH----- 335 (444)
Q Consensus 262 ~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~-~~~~----- 335 (444)
. ...+++++.+++|.. ..|+||++|++.+|+|+.|.++.+++.++|++++......+++++... .+.+
T Consensus 228 ~-~~~t~~v~~i~~g~~-----~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (395)
T TIGR03320 228 L-GKGTLTVSEIFFSSP-----SRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQGAEAKVEMYNYDRPSYTGLVY 301 (395)
T ss_pred c-CcCceeeeeeecCCC-----CcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhcCCCceEeeeccCccccccccc
Confidence 1 135788999887642 789999999999999999999999999999988753222234433210 0000
Q ss_pred c-cCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcch-HHHHhcCCCeEEEccCCCCCCCCCCCCccccHHH
Q 013368 336 D-KFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDA-RYFRERGLPAIGFSPMANTPILLHDHNEFLNQAE 413 (444)
Q Consensus 336 ~-~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~-~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~ 413 (444)
+ ....|++ .++.++++++++.++++++.+..+.....++++|+ ++++..|+|++.|||+... ++|++|||+++++
T Consensus 302 ~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~p~v~~Gpg~~~--~aH~~nE~v~i~~ 378 (395)
T TIGR03320 302 PTECYFPTW-VLPEDHLITKAALETYKRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDED--QAHAPNEKTWKED 378 (395)
T ss_pred ccccccCcc-ccCCCCHHHHHHHHHHHHHhCCCCceeecceecccceehhhcCCCEEEECCCchh--hccCCCcEEEHHH
Confidence 0 0123333 36778999999999999987655344455677887 5677889999999999753 7999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 013368 414 YLKGIDIYESIIKAYA 429 (444)
Q Consensus 414 l~~~~~~~~~~l~~l~ 429 (444)
+.+++++|..++..++
T Consensus 379 l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03320 379 LVRAAAMYAAIPTVYL 394 (395)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999876
No 23
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-54 Score=430.84 Aligned_cols=367 Identities=19% Similarity=0.255 Sum_probs=298.1
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecC--------------CCCeEEEEecCC
Q 013368 22 SPAKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAK--------------NKPLILLKWPGS 86 (444)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------------~~~nl~~~~~g~ 86 (444)
..+.+.+++++.|++|++|||+|.. .++.++++||+++|+++|++++.++... ..+||++++.+.
T Consensus 11 ~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~ 90 (402)
T PRK07338 11 LIDDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPE 90 (402)
T ss_pred HHhhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCC
Confidence 3456788999999999999998632 1246899999999999999988654321 226999998543
Q ss_pred CCCCCcEEEEeecccccCCCCCCccCCCcce--ecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecC
Q 013368 87 NPQLPSILLNSHTDVVPSEPSKWSHHPFGAH--LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164 (444)
Q Consensus 87 ~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~--~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 164 (444)
. .++|+|+||+||||+++ +||++. ++ ||++||||++|||++++++|.|++.|.+.+.++++++.|+|+++
T Consensus 91 ~--~~~lll~gH~DvVp~~~-----~Pf~~~~~~~-~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~d 162 (402)
T PRK07338 91 A--PRQVLLTGHMDTVFPAD-----HPFQTLSWLD-DGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPD 162 (402)
T ss_pred C--CccEEEEeecCccCCCC-----CcccCCeEee-CCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECC
Confidence 2 35799999999999852 799875 76 99999999999999999999999999888777788999999999
Q ss_pred cccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCC-CCCC-CHHHHHHHHHH
Q 013368 165 EEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-LYDN-SAMENLFKSIE 242 (444)
Q Consensus 165 EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p~~g-nai~~~~~~i~ 242 (444)
||.|+ .|++.+++++.. ..+++++++.+. + ...+..+++|..+++|+++|+++|+|. |+.+ ||+..++++++
T Consensus 163 EE~g~-~g~~~~~~~~~~-~~~~~i~~ep~~--~--~~~v~~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~ 236 (402)
T PRK07338 163 EEIGS-PASAPLLAELAR-GKHAALTYEPAL--P--DGTLAGARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELAL 236 (402)
T ss_pred cccCC-hhhHHHHHHHhc-cCcEEEEecCCC--C--CCcEEeecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHH
Confidence 99986 699988886432 347778875321 1 246788899999999999999999996 7888 99999999999
Q ss_pred HHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--
Q 013368 243 SVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA-- 320 (444)
Q Consensus 243 ~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~-- 320 (444)
+|+++... ...+|++++.+++|. ..|+||++|++++|+|+.|.++.+++.++|+++++..
T Consensus 237 ~l~~l~~~------------~~~~t~~vg~i~gG~------~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~ 298 (402)
T PRK07338 237 ALHALNGQ------------RDGVTVNVAKIDGGG------PLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQ 298 (402)
T ss_pred HHHhhhcc------------CCCcEEEEEEEecCC------CCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhcccc
Confidence 99875421 123689999999987 8999999999999999999999999999999998753
Q ss_pred CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeE-EEccCCCCC
Q 013368 321 SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAI-GFSPMANTP 399 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v-~~gp~~~~~ 399 (444)
..++++++.. ....|++.....+.+++++++++.++.+.+. .....+|++|++++...|+|++ .|||+..
T Consensus 299 ~~~~~~~~~~------~~~~~p~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g~tDa~~~~~~giP~v~~~Gpg~~-- 369 (402)
T PRK07338 299 RHGVSLHLHG------GFGRPPKPIDAAQQRLFEAVQACGAALGLTI-DWKDSGGVCDGNNLAAAGLPVVDTLGVRGG-- 369 (402)
T ss_pred CCCeEEEEEc------cccCCCCCCCcchHHHHHHHHHHHHHcCCCc-ccccCCccchHHHHhhcCCCeEeccCCCCC--
Confidence 3456665542 1233443223345589999999888876544 4455678999999999999999 7999854
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 400 ILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 400 ~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
.+|++|||++++++.+++++|+.++.+++.
T Consensus 370 -~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 370 -NIHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred -CCCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 589999999999999999999999998853
No 24
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=2.2e-53 Score=421.66 Aligned_cols=363 Identities=15% Similarity=0.232 Sum_probs=293.3
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCCCCh---hHHHHHHHHHHHHCCCceEEEeecCCC-CeEEEEecCCCCCCCcEEEEe
Q 013368 22 SPAKSDDSIIERFRAYLQIDTSQPNPDY---TNASKFILAQAEALSLESQTLEFAKNK-PLILLKWPGSNPQLPSILLNS 97 (444)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~i~s~s~~~~e---~~~~~~l~~~l~~~G~~~~~~~~~~~~-~nl~~~~~g~~~~~~~i~l~~ 97 (444)
....+.++++++|++|++|||++ +++ .++++|+.++|+++|++++.++...+. +|+++.+.+.+++.|+|+|+|
T Consensus 5 ~~~~~~~~~~~~l~~Lv~i~S~s--~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~g 82 (376)
T PRK07473 5 NLPFDSEAMLAGLRPWVECESPT--WDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAG 82 (376)
T ss_pred cCCcCHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEe
Confidence 34567889999999999999997 444 367789999999999999876543332 589998865433458999999
Q ss_pred ecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHH
Q 013368 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (444)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (444)
|+||||+. ..|+.+||. ++ +|++||||++|||++++++|.|+++|.+.+..++.+|.|+|+++||.|+ .|++.++
T Consensus 83 H~DtV~~~-~~~~~~p~~--~~-~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~-~g~~~~~ 157 (376)
T PRK07473 83 HMDTVHPV-GTLEKLPWR--RE-GNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGT-PSTRDLI 157 (376)
T ss_pred cCCCCCCC-CCccCCCeE--EE-CCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCC-ccHHHHH
Confidence 99999875 359999995 66 9999999999999999999999999998887777899999999999986 7999999
Q ss_pred hccccccCceEEEeccCCCCcCC-cceeeecccccEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhhHH
Q 013368 178 DSHVFNSLNVGIVLDEGLASTTE-DYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDL 254 (444)
Q Consensus 178 ~~~~~~~~d~~~~~~~g~~~p~~-~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~l~~~~~~~ 254 (444)
+++.. ..|++++.+ |+. ...++.+++|..+++|+++|+++|+| .|+.| ||+..+++++.+|+.+..
T Consensus 158 ~~~~~-~~d~~iv~e-----p~~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~----- 226 (376)
T PRK07473 158 EAEAA-RNKYVLVPE-----PGRPDNGVVTGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT----- 226 (376)
T ss_pred HHhhc-cCCEEEEeC-----CCCCCCCEEEECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC-----
Confidence 86433 358888886 443 23689999999999999999999987 58888 999999999999986531
Q ss_pred HHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccc
Q 013368 255 VKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASL 334 (444)
Q Consensus 255 ~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 334 (444)
..++++++.|++|. ..|+||++|++.+++|....+..+++.+++.+.+. ...++++++..
T Consensus 227 ---------~~~~~~vg~i~gg~------~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~---- 286 (376)
T PRK07473 227 ---------EDCTFSVGIVHGGQ------WVNCVATTCTGEALSMAKRQADLDRGVARMLALSG-TEDDVTFTVTR---- 286 (376)
T ss_pred ---------CCceEeEeeEEcCC------CCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC-cCCCeEEEEEc----
Confidence 12578999999987 89999999999999999888888888888776665 23455666553
Q ss_pred cccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEE-EccCCCCCCCCCCCCccccHHH
Q 013368 335 HDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIG-FSPMANTPILLHDHNEFLNQAE 413 (444)
Q Consensus 335 ~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~-~gp~~~~~~~~H~~~E~i~~~~ 413 (444)
....|++.....+.++++.+.++.+..+.+. .....+|+||+++++..|+|++. |||+.. .+|++|||+++++
T Consensus 287 --~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~g~tDa~~~~~~giP~v~g~Gpg~~---~~H~~dE~v~i~~ 360 (376)
T PRK07473 287 --GVTRPVWEPDAGTMALYEKARAIAGQLGLSL-PHGSAGGGSDGNFTGAMGIPTLDGLGVRGA---DYHTLNEHIEVDS 360 (376)
T ss_pred --cccCCCCCCChhHHHHHHHHHHHHHHcCCCC-ccccCccccHhhhHHhcCCCEEEeccCCCC---CCCCCCceEeccc
Confidence 1234444222223478888888877766554 44456789999999999999995 999864 5899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 013368 414 YLKGIDIYESIIKAY 428 (444)
Q Consensus 414 l~~~~~~~~~~l~~l 428 (444)
+.+++++|+.++..+
T Consensus 361 l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 361 LAERGRLMAGLLATL 375 (376)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998754
No 25
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=3.5e-53 Score=432.36 Aligned_cols=393 Identities=20% Similarity=0.234 Sum_probs=304.1
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEee
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~----~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H 98 (444)
++.+.++.+++|++|++|||+|+.. ++.+++++|+++|+++|++++.++.. +++||++.+.|.+++.|+|+|+||
T Consensus 12 ~~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~-~~~~l~a~~~g~~~~~~~lll~gH 90 (464)
T PRK09104 12 IDANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTP-GHPMVVAHHEGPTGDAPHVLFYGH 90 (464)
T ss_pred HHHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecC-CCCEEEEEecCCCCCCCEEEEEec
Confidence 4557889999999999999998432 24688999999999999999877654 678999999765445689999999
Q ss_pred cccccCCC-CCCccCCCcceecCCC-----eEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCcccc
Q 013368 99 TDVVPSEP-SKWSHHPFGAHLDSQG-----NIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDG 172 (444)
Q Consensus 99 ~Dtvp~~~-~~W~~~Pf~~~~~~~g-----~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G 172 (444)
+||||.++ +.|+++||++.++ ++ +|||||++||||+++++|.|++.|++.+.+++++|.|+++++||.|+ .|
T Consensus 91 ~DvVp~~~~~~W~~~Pf~~~~~-~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g 168 (464)
T PRK09104 91 YDVQPVDPLDLWESPPFEPRIK-ETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGS-PS 168 (464)
T ss_pred ccCCCCCCcccCCCCCCcceEe-cCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCC-cc
Confidence 99999987 7799999999997 65 59999999999999999999999999776788999999999999997 58
Q ss_pred HHHHHhccc-cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEee--cCCccCC-CCCC-CHHHHHHHHHHHHHhc
Q 013368 173 AEKFADSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAK-LYDN-SAMENLFKSIESVRRF 247 (444)
Q Consensus 173 ~~~~~~~~~-~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~-p~~g-nai~~~~~~i~~l~~l 247 (444)
+..++.+.. ....|++++.+.+...++ ...++++++|.++++|+++| +++|||. |+.+ ||+..+++++.+|.+.
T Consensus 169 ~~~~l~~~~~~~~~d~~iv~E~~~~~~~-~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~ 247 (464)
T PRK09104 169 LVPFLEANAEELKADVALVCDTGMWDRE-TPAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDE 247 (464)
T ss_pred HHHHHHhhHHhcCCCEEEEeCCCCCCCC-CeEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCC
Confidence 877776532 113588888885433222 34788999999999999999 6899997 5667 9999999999998763
Q ss_pred hhh-------------------hhHH-------HHh--c---h---------hccCCceeeeeeeeccCCCCCCCccccc
Q 013368 248 RAS-------------------QFDL-------VKA--G---L---------KAEGEVVSVNMAFLKAGTPSPNGFVMNL 287 (444)
Q Consensus 248 ~~~-------------------~~~~-------~~~--~---~---------~~~~~~~t~~~~~i~~G~~~~~~~~~n~ 287 (444)
... .++. +.. + + ......+|++++.+++|.. +++..|+
T Consensus 248 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~--~~~~~nv 325 (464)
T PRK09104 248 TGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT--GEGFKTV 325 (464)
T ss_pred CCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC--CCCCccE
Confidence 110 0000 000 0 0 0001246899999998863 2236799
Q ss_pred ccCceEEEEEeecCCCCCHHHHHHHHHHHhccC-CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCC
Q 013368 288 QPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA-SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 366 (444)
Q Consensus 288 ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~ 366 (444)
||++|++++|+|++|.++.+++.++|+++++.. ..+.++++.. ....|+. .++.++++++.+.+++++..+.
T Consensus 326 vP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~~~~~~v~~~~------~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~ 398 (464)
T PRK09104 326 IPAEASAKVSFRLVGGQDPAKIREAFRAYVRARLPADCSVEFHD------HGGSPAI-ALPYDSPALAAAKAALSDEWGK 398 (464)
T ss_pred ecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCCeEEEEEe------cCCCCce-ECCCCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999988632 2344555442 1233443 4677899999999999988765
Q ss_pred CCCceeecCCc-chHHHH-hcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 367 LGKPEIFPAST-DARYFR-ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 367 ~~~~~~~~g~t-D~~~~~-~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
.+.....+|++ |++.|. ..|+|++.||||... ..+|++||+++++++.+++++|..++..++
T Consensus 399 ~~~~~~~~g~~~~~~~~~~~~gip~v~~g~G~~~-~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 399 PAVLIGSGGSIPIVGDFKRILGMDSLLVGFGLDD-DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred CceecCCCCcHHHHHHHHHHhCCCEEEecCCCCC-CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 42332333333 355554 469999999997432 369999999999999999999999998875
No 26
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.4e-53 Score=426.69 Aligned_cols=370 Identities=18% Similarity=0.239 Sum_probs=298.0
Q ss_pred CCCChhHHHHHHHhhhcccCCCCC-CChhHHHHHHHHHHHHCCCceEEEeecC-CCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAK-NKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~-~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
.+.+.+++++++++|++|||+|+. .++.++++||+++|+++|++++.++... ..+|+++.++|. +.|+|+|+||+|
T Consensus 32 ~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~--~~~~ill~~H~D 109 (410)
T PRK06133 32 AQQEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGT--GKRRIMLIAHMD 109 (410)
T ss_pred HHHhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCC--CCceEEEEeecC
Confidence 345667899999999999999743 2345899999999999999988765422 357999999765 248999999999
Q ss_pred cccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc
Q 013368 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (444)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (444)
|||.. ..|+++||. ++ +|++||||++|||++++++|.|++.|++.+.+++++|.|+|+++||.|+ .|++.++++.
T Consensus 110 ~Vp~~-~~w~~~Pf~--~~-~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~G~~~~~~~~ 184 (410)
T PRK06133 110 TVYLP-GMLAKQPFR--ID-GDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGS-PGSRELIAEL 184 (410)
T ss_pred ccCCC-CccCCCCEE--EE-CCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCC-ccHHHHHHHH
Confidence 99986 459999996 65 9999999999999999999999999998887778999999999999886 6999999864
Q ss_pred ccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhc
Q 013368 181 VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (444)
Q Consensus 181 ~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~ 258 (444)
. ...|++++.+++. ++ ..++.+++|..+++|+++|+++||| .|+.| ||+..+++++..|+++...
T Consensus 185 ~-~~~d~~i~~ep~~--~~--~~v~~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~~-------- 251 (410)
T PRK06133 185 A-AQHDVVFSCEPGR--AK--DALTLATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGDP-------- 251 (410)
T ss_pred h-ccCCEEEEeCCCC--CC--CCEEEeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccCC--------
Confidence 3 3458888876321 11 3578899999999999999999986 69888 9999999999998765321
Q ss_pred hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc-CCCCceEEEeeccccccc
Q 013368 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFEFKQRASLHDK 337 (444)
Q Consensus 259 ~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (444)
...++++++.++||. ..|+||++|++.+|+|+.|.++.+++.++|+++++. ...+++++++. .
T Consensus 252 ----~~~~t~~~~~i~gG~------~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~------~ 315 (410)
T PRK06133 252 ----AKGTTLNWTVAKAGT------NRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKNKLVPDTEVTLRF------E 315 (410)
T ss_pred ----CCCeEEEeeEEECCC------CCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhccCCCCeEEEEEe------c
Confidence 123678999999987 899999999999999999999999999999999875 23456666653 1
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHhcCCCCCc--eeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHH
Q 013368 338 FGRPILTATDSSNPWWNLLEEAVRKANGKLGKP--EIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYL 415 (444)
Q Consensus 338 ~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~ 415 (444)
...|++.....+.++++++.++.++.+... .+ ...+|++|+++++..|+|++.+|+|..+ .++|++||+++++++.
T Consensus 316 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~-~~aH~~nE~i~i~~~~ 393 (410)
T PRK06133 316 RGRPPLEANAASRALAEHAQGIYGELGRRL-EPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG-FGAHSNDEYIELNSIV 393 (410)
T ss_pred cccCCcccCcchHHHHHHHHHHHHHcCCCc-cccccCCCCCchHHHHHhcCCCceEecccCCC-CCCCCCCcEEEcccHH
Confidence 234443222334578888888887765443 22 4567899999999999998875443222 2699999999999999
Q ss_pred HHHHHHHHHHHHHHc
Q 013368 416 KGIDIYESIIKAYAS 430 (444)
Q Consensus 416 ~~~~~~~~~l~~l~~ 430 (444)
+++++|..++.++++
T Consensus 394 ~~~~~~~~~~~~~~~ 408 (410)
T PRK06133 394 PRLYLLTRMIMELSR 408 (410)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998864
No 27
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-52 Score=429.91 Aligned_cols=385 Identities=25% Similarity=0.365 Sum_probs=295.8
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCCCh-------hHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEE
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPNPDY-------TNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILL 95 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~~e-------~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l 95 (444)
...+.++.+++|++|++|||+|+..+. .++++||+++|+.+|++++.+... ..|+++.++|.+++.++|+|
T Consensus 39 ~~~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~--~~~vv~~~~g~~~~~~~ill 116 (486)
T PRK08262 39 VAVDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVG--GHSLLYTWKGSDPSLKPIVL 116 (486)
T ss_pred CcCCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEEC--CccEEEEEECCCCCCCeEEE
Confidence 345678899999999999999853222 257888999999999988776653 35888888776554489999
Q ss_pred EeecccccCCC---CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCcccc
Q 013368 96 NSHTDVVPSEP---SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDG 172 (444)
Q Consensus 96 ~~H~Dtvp~~~---~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G 172 (444)
+||+||||.++ ..|+++||+++++ +|+|||||++||||+++++|.|++.|++.+.+++++|.++|+++||.|+ .|
T Consensus 117 ~gH~DvVp~~~~~~~~W~~~Pf~~~~~-dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~-~G 194 (486)
T PRK08262 117 MAHQDVVPVAPGTEGDWTHPPFSGVIA-DGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGG-LG 194 (486)
T ss_pred ECcccccCCCCCCcccCccCCCceEee-CCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCC-cC
Confidence 99999999974 5799999999997 9999999999999999999999999999887789999999999999987 59
Q ss_pred HHHHHhccccccCceEEEeccC----------CCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHH
Q 013368 173 AEKFADSHVFNSLNVGIVLDEG----------LASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIE 242 (444)
Q Consensus 173 ~~~~~~~~~~~~~d~~~~~~~g----------~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~ 242 (444)
++.+++.....+.+..++++.+ ...|+ ..+..+++|..+++|+++|+++|||.|+..||+..++++++
T Consensus 195 ~~~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~--~~i~~~~kG~~~~~i~v~G~~~Hss~p~~~nai~~l~~~l~ 272 (486)
T PRK08262 195 ARAIAELLKERGVRLAFVLDEGGAITEGVLPGVKKPV--ALIGVAEKGYATLELTARATGGHSSMPPRQTAIGRLARALT 272 (486)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCceecccccCCCCceE--EeeEEeeeeeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHH
Confidence 9988864211111222222221 11233 25778899999999999999999998766799999999999
Q ss_pred HHHhchhh---------hhHHHHhc---------------------------hhccCCceeeeeeeeccCCCCCCCcccc
Q 013368 243 SVRRFRAS---------QFDLVKAG---------------------------LKAEGEVVSVNMAFLKAGTPSPNGFVMN 286 (444)
Q Consensus 243 ~l~~l~~~---------~~~~~~~~---------------------------~~~~~~~~t~~~~~i~~G~~~~~~~~~n 286 (444)
.|+++... .++.+... .......+|++++.|+||. ..|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~------~~N 346 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSP------KDN 346 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCC------ccc
Confidence 99874210 11111000 0001124789999999986 889
Q ss_pred cccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCC
Q 013368 287 LQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 366 (444)
Q Consensus 287 ~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~ 366 (444)
+||++|++.+|+|++|.++.+++.++|+++++.. ++++++.. ....|++ ..+.++++++.+.+++++.++.
T Consensus 347 vIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~--~~~v~~~~------~~~~~~~-~~~~~~~lv~~l~~a~~~~~g~ 417 (486)
T PRK08262 347 VLPQRATATVNFRILPGDSVESVLAHVRRAVADD--RVEIEVLG------GNSEPSP-VSSTDSAAYKLLAATIREVFPD 417 (486)
T ss_pred cCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC--ceEEEEec------CCCCCCC-CCCCCCHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999988643 44554442 1123333 3567899999999999998764
Q ss_pred -CCCceeecCCcchHHHHhcC-----CCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 367 -LGKPEIFPASTDARYFRERG-----LPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 367 -~~~~~~~~g~tD~~~~~~~g-----ip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
...+....|+||++++...+ +|++.|||++.. .+|++||+++++++.+++++|..++..+++
T Consensus 418 ~~~~~~~~~g~tDa~~~~~~~p~~~~~~~~~~gpg~~~--~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 418 VVVAPYLVVGATDSRHYSGISDNVYRFSPLRLSPEDLA--RFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred CccccceecccccHHHHHHhcCCeEEECCccCCccccc--CCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 22334567899999998763 344455665433 699999999999999999999999998865
No 28
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-53 Score=427.41 Aligned_cols=390 Identities=19% Similarity=0.229 Sum_probs=298.9
Q ss_pred CCCCChhHHHHHHHhhhcccCCCCC----CChhHHHHHHHHHHHHCCC-ceEEEeecCCCCeEEEEecCCCCCCCcEEEE
Q 013368 22 SPAKSDDSIIERFRAYLQIDTSQPN----PDYTNASKFILAQAEALSL-ESQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (444)
Q Consensus 22 ~~~~~~~~~~~~l~~l~~i~s~s~~----~~e~~~~~~l~~~l~~~G~-~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~ 96 (444)
+.+.+.++++++|++|++|||+|+. .++.++++||.++|+++|+ +++.++ .++++|+++.+++.. +.|+|+|+
T Consensus 12 ~i~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~nl~a~~~~~~-~~~~lll~ 89 (449)
T PRK07907 12 RVAELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVS-ADGAPAVIGTRPAPP-GAPTVLLY 89 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEe-cCCCCEEEEEecCCC-CCCEEEEE
Confidence 4556788999999999999999853 2467899999999999998 777665 236789999987643 35899999
Q ss_pred eecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHH
Q 013368 97 SHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (444)
Q Consensus 97 ~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (444)
||+||||+++ +.|+++||++.++ ||+|||||++|||++++++|.|++.| +.+++++|.|+++++||.|+ .|+++
T Consensus 90 gH~DvVp~~~~~~W~~~Pf~~~~~-~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~-~g~~~ 164 (449)
T PRK07907 90 AHHDVQPPGDPDAWDSPPFELTER-DGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGS-PSLER 164 (449)
T ss_pred cccCCCCCCCccccCCCCceeEEE-CCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCC-ccHHH
Confidence 9999999976 6899999999998 99999999999999999999999998 33567899999999999987 69999
Q ss_pred HHhccc-cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEe--ecCCccCCC-CCC-CHHHHHHHHHHHHHhchhh
Q 013368 176 FADSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKAR--GAPGHGAKL-YDN-SAMENLFKSIESVRRFRAS 250 (444)
Q Consensus 176 ~~~~~~-~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~--G~~~Hs~~p-~~g-nai~~~~~~i~~l~~l~~~ 250 (444)
++++.. ....|++++.+.+.... +.+.+++++||..+++++++ |+++|||.| ..+ ||+..+++++.+|.++...
T Consensus 165 ~l~~~~~~~~~d~~iv~E~~~~~~-~~p~i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~ 243 (449)
T PRK07907 165 LLAEHPDLLAADVIVIADSGNWSV-GVPALTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGN 243 (449)
T ss_pred HHHhchHhhcCCEEEEecCCcCCC-CCeEEEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCC
Confidence 998632 12358888887543211 12358899999999999998 889999974 445 9999999999999764210
Q ss_pred ----------hh-----H--HHHh------c---------hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEe
Q 013368 251 ----------QF-----D--LVKA------G---------LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDI 298 (444)
Q Consensus 251 ----------~~-----~--~~~~------~---------~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~ 298 (444)
.+ + .... + .......+|++++.|++|. ++...|+||++|++++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~---~g~~~nvIP~~a~~~~di 320 (449)
T PRK07907 244 VAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPP---VAGASNALPPSARARLSL 320 (449)
T ss_pred EeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCC---CCCCCCEecCceEEEEEE
Confidence 00 0 0000 0 0000135688999998753 344889999999999999
Q ss_pred ecCCCCCHHHHHHHHHHHhccCCC-CceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCc
Q 013368 299 RVPPTTDAESLERRIVEEWAPASR-NMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPAST 377 (444)
Q Consensus 299 R~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~t 377 (444)
|+.|.++.+++.+.|+++++...+ +.+++++.. ....|. .++.++++++.+.+++++..+..+.....+|++
T Consensus 321 R~~p~~~~e~v~~~l~~~l~~~~~~~~~~~~~~~-----~~~~p~--~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~g~~ 393 (449)
T PRK07907 321 RVAPGQDAAEAQDALVAHLEAHAPWGAHVTVERG-----DAGQPF--AADASGPAYDAARAAMREAWGKDPVDMGMGGSI 393 (449)
T ss_pred EcCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEC-----CCcCce--eCCCCCHHHHHHHHHHHHHhCCCceecCCCCcH
Confidence 999999999999999998874322 445555431 123343 356789999999999999866543333334443
Q ss_pred c-hHHHHh-c-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 378 D-ARYFRE-R-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 378 D-~~~~~~-~-gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
+ .+.+.. . ++|++.|||+... .++|++||+++++++.+++++|+.++..+..
T Consensus 394 ~~~~~~~~~~~~~~~v~~Gpg~~~-~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~~ 448 (449)
T PRK07907 394 PFIAELQEAFPQAEILVTGVEDPK-TRAHSPNESVHLGELERAAVAEALLLARLAA 448 (449)
T ss_pred HHHHHHHHhcCCCcEEEeccCCCC-CCCcCCCCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 3 233433 3 5899999999642 2699999999999999999999999998853
No 29
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.4e-52 Score=413.65 Aligned_cols=353 Identities=20% Similarity=0.239 Sum_probs=274.5
Q ss_pred hhHHHHHHHhhhcccCCCCC--CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 27 DDSIIERFRAYLQIDTSQPN--PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
.++.+++|++|++|||.++. .++.++++||+++|+ |++++.++...+++|+++. .| .|+|+|+||+||||.
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~-~g----~~~lll~gH~DtVp~ 77 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAV-RG----TPKYLFNVHLDTVPD 77 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEE-cC----CCeEEEEeeeCCCCC
Confidence 45789999999999998753 346889999999997 9988877654467899986 33 268999999999999
Q ss_pred CCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
++ .|+++||.+.++ +|+|||||++|||++++++|.|++. +.++|.|+|++|||.|+..|++.+++.+. +
T Consensus 78 ~~-~w~~~Pf~~~~~-~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~ 146 (364)
T PRK08737 78 SP-HWSADPHVMRRT-DDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--P 146 (364)
T ss_pred CC-CCCCCCCceEEE-CCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--C
Confidence 74 799999999997 9999999999999999999999863 35789999999999886468889888653 3
Q ss_pred CceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCC-CCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhcc
Q 013368 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (444)
Q Consensus 185 ~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p-~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 262 (444)
.|++++. +|+. ..++.+++|..+++|+++|+++|+|.| +.| |||..+++++.++.++.... ..+.. ..
T Consensus 147 ~~~~iv~-----Ept~-~~~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~---~~~~~-~~ 216 (364)
T PRK08737 147 YEAVLVA-----EPTM-SEAVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESL---AHARF-GG 216 (364)
T ss_pred CCEEEEc-----CCCC-ceeEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhh---hhhcc-CC
Confidence 5776665 5775 678999999999999999999999998 478 99999999998765432111 00000 01
Q ss_pred CCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCC
Q 013368 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPI 342 (444)
Q Consensus 263 ~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (444)
....+++++.++||. +.|+||++|++++|+|+.|.++.+++.++|+++++.. ...+++... ....|+
T Consensus 217 ~~~~t~~vg~i~GG~------~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~--~~~~~~~~~-----~~~~~~ 283 (364)
T PRK08737 217 LTGLRFNIGRVEGGI------KANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA--AATFEETFR-----GPSLPS 283 (364)
T ss_pred CCCCceEEeeEecCC------CCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc--CCceEEEec-----cCCCCC
Confidence 124589999999997 8999999999999999999999999999998776532 233333220 112222
Q ss_pred ccccCCCChHHHHH-HHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013368 343 LTATDSSNPWWNLL-EEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 343 ~~~~~~~~~l~~~~-~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
. ..++ ++++..+ .++.++.+... ....+++||+++|+..|+|++.||||... ++|++||+++++++.+++++|
T Consensus 284 ~-~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~tDa~~~~~~Gip~v~~GpG~~~--~aHt~dE~i~i~~l~~~~~~~ 357 (364)
T PRK08737 284 G-DIAR-AEERRLAARDVADALDLPI--GNAVDFWTEASLFSAAGYTALVYGPGDIA--QAHTADEFVTLDQLQRYAESV 357 (364)
T ss_pred c-ccCc-chHHHHHHHHHHhhhcCCC--CceeccccCHHHHHHcCCCEEEECCCChh--hccCCCcceeHHHHHHHHHHH
Confidence 2 1222 3566555 44444444332 23456789999999999999999999653 799999999999999999999
Q ss_pred HHHHH
Q 013368 422 ESIIK 426 (444)
Q Consensus 422 ~~~l~ 426 (444)
..++.
T Consensus 358 ~~~~~ 362 (364)
T PRK08737 358 HRIIN 362 (364)
T ss_pred HHHhc
Confidence 99875
No 30
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=3.9e-52 Score=409.42 Aligned_cols=338 Identities=22% Similarity=0.242 Sum_probs=280.1
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
..++.+++|++|++|||+| ++|.++++||.++|+++|++++.++. .|++. .| .++|+|+||+||||.
T Consensus 8 ~~~~~~~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~~~~----~~~~~--~g----~~~lll~gH~DtVp~- 74 (346)
T PRK00466 8 VKQKAKELLLDLLSIYTPS--GNETNATKFFEKISNELNLKLEILPD----SNSFI--LG----EGDILLASHVDTVPG- 74 (346)
T ss_pred HHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHcCCeEEEecC----CCcEe--cC----CCeEEEEeccccCCC-
Confidence 3478899999999999975 78899999999999999998876542 36553 23 267999999999984
Q ss_pred CCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccC
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (444)
+|++.++ +|+|||||++|||++++++|.|++.|.+.+ .++.|++++|||.|+ .|++++++++ . ..
T Consensus 75 -------~~~~~~~-~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~-~G~~~l~~~~-~-~~ 139 (346)
T PRK00466 75 -------YIEPKIE-GEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTS-IGAKELVSKG-F-NF 139 (346)
T ss_pred -------CCCceee-CCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCC-ccHHHHHhcC-C-CC
Confidence 2566776 999999999999999999999999998765 458999999999885 6999999875 3 35
Q ss_pred ceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhchhccCCc
Q 013368 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (444)
Q Consensus 186 d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~ 265 (444)
|.+++. +|++...++++++|..+++|+++|+++|+|.|+. ||+..+++++..|.++... ...
T Consensus 140 d~~i~~-----ep~~~~~i~~~~kG~~~~~i~v~G~~~Has~p~~-nAi~~~~~~l~~l~~~~~~------------~~~ 201 (346)
T PRK00466 140 KHIIVG-----EPSNGTDIVVEYRGSIQLDIMCEGTPEHSSSAKS-NLIVDISKKIIEVYKQPEN------------YDK 201 (346)
T ss_pred CEEEEc-----CCCCCCceEEEeeEEEEEEEEEEeeccccCCCCc-CHHHHHHHHHHHHHhcccc------------CCC
Confidence 776665 4665456899999999999999999999998754 9999999999988754211 123
Q ss_pred eeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccc
Q 013368 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTA 345 (444)
Q Consensus 266 ~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 345 (444)
++++++.++||. ..|+||++|++++|+|+.|.++.+++.++|++.+.. +++++. ...|+. .
T Consensus 202 ~t~~~~~i~gG~------~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~----~~~~~~--------~~~~~~-~ 262 (346)
T PRK00466 202 PSIVPTIIRAGE------SYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE----CGLKIV--------DETPPV-K 262 (346)
T ss_pred CcceeeEEecCC------cCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh----CcEeec--------cCCCCc-c
Confidence 578999999987 899999999999999999999999999999888863 344333 233333 3
Q ss_pred cCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 013368 346 TDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 425 (444)
Q Consensus 346 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 425 (444)
++.++++++++.+++++.+.++ .+...+|+||++++++.++|++.|||+... ++|++|||++++++.+++++|..++
T Consensus 263 ~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tD~~~~~~~~~~~v~fGpg~~~--~aH~~nE~i~i~~l~~~~~~~~~~i 339 (346)
T PRK00466 263 VSINNPVVKALMRALLKQNIKP-RLVRKAGTSDMNILQKITTSIATYGPGNSM--LEHTNQEKITLDEIYIAVKTYMLAI 339 (346)
T ss_pred cCCCCHHHHHHHHHHHHhCCCc-eEEecCCcCcHHHHHHhCCCEEEECCCCcc--cccCCCceeeHHHHHHHHHHHHHHH
Confidence 6678999999999999875543 555667899999999999899999998754 7999999999999999999999999
Q ss_pred HHHHcc
Q 013368 426 KAYASY 431 (444)
Q Consensus 426 ~~l~~~ 431 (444)
..++..
T Consensus 340 ~~l~~~ 345 (346)
T PRK00466 340 EELWQK 345 (346)
T ss_pred HHHHhc
Confidence 988653
No 31
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-51 Score=418.61 Aligned_cols=385 Identities=18% Similarity=0.227 Sum_probs=294.0
Q ss_pred hHHHHHHHhhhcccCCCCC-CChhHHHHHHH----HHHHHCCCceEEEeec--CCCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 28 DSIIERFRAYLQIDTSQPN-PDYTNASKFIL----AQAEALSLESQTLEFA--KNKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~----~~l~~~G~~~~~~~~~--~~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
++.+++|++|++|||+|+. .++.++++|+. ++|+++|++++.++.. .+++||++.+.+.+ +.|+|+|+||+|
T Consensus 17 ~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~-~~~~lll~gH~D 95 (469)
T PRK07079 17 GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD-ALPTVLIYGHGD 95 (469)
T ss_pred HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC-CCCEEEEEcccC
Confidence 5799999999999999853 34556777764 5899999999876643 36789999985432 348999999999
Q ss_pred cccCCCCCCc--cCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHc-CCCCcceEEEEeecCcccCccccHHHHH
Q 013368 101 VVPSEPSKWS--HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-GFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (444)
Q Consensus 101 tvp~~~~~W~--~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (444)
|||.+++.|+ ++||+++++ ||++||||++||||+++++|.|+++|.+. +.+++++|.|++++|||.|+ .|+++++
T Consensus 96 vVp~~~~~W~~~~~Pf~~~~~-dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~-~G~~~l~ 173 (469)
T PRK07079 96 VVRGYDEQWREGLSPWTLTEE-GDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGS-PGLAEVC 173 (469)
T ss_pred CCCCChHHhcccCCCCccccc-CCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCC-ccHHHHH
Confidence 9998777899 599999998 99999999999999999999999998764 46788999999999999997 6999999
Q ss_pred hccc--cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeec--CCccCCCCCC---CHHHHHHHHHHHHHhchhh
Q 013368 178 DSHV--FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGA--PGHGAKLYDN---SAMENLFKSIESVRRFRAS 250 (444)
Q Consensus 178 ~~~~--~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~--~~Hs~~p~~g---nai~~~~~~i~~l~~l~~~ 250 (444)
+++. +. .|++++.+.+...++. ..+++++||..+++|+++|+ +.||+. +.| ||+..++.++..+.+....
T Consensus 174 ~~~~~~~~-~d~~iv~e~~~~~~~~-~~i~~g~kG~~~~~v~v~G~~~~~hs~~-~~g~~~nai~~l~~ai~~l~~~~~~ 250 (469)
T PRK07079 174 RQHREALA-ADVLIASDGPRLSAER-PTLFLGSRGAVNFRLRVNLRDGAHHSGN-WGGLLRNPGTVLAHAIASLVDARGR 250 (469)
T ss_pred HHhHHhcC-CCEEEEeCCCccCCCC-eEEEEecceEEEEEEEEeeCCCCCCCCc-cccccCCHHHHHHHHHHHhCCCCCC
Confidence 8752 33 5888887754433332 56999999999999999998 456664 433 9999999999988542100
Q ss_pred -------------hh-HHHHh-----ch-----------------hccCCceeeeeeeeccCCCCCCCcccccccCceEE
Q 013368 251 -------------QF-DLVKA-----GL-----------------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEA 294 (444)
Q Consensus 251 -------------~~-~~~~~-----~~-----------------~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~ 294 (444)
.. ..+.. +. ...-..+|+|++.|++|.. ....|+||++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~---~~~~NvVP~~a~~ 327 (469)
T PRK07079 251 IQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNP---DAPVNAIPGSARA 327 (469)
T ss_pred EecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCC---CCcceEecCceEE
Confidence 00 00000 00 0001135789999999852 1257999999999
Q ss_pred EEEeecCCCCCHHHHHHHHHHHhccCC-CCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCcee-
Q 013368 295 GFDIRVPPTTDAESLERRIVEEWAPAS-RNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEI- 372 (444)
Q Consensus 295 ~~d~R~~~~~~~~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~- 372 (444)
++|+|++|.++.+++.++|+++++... ..+++++.. ...|. .++.++++++.+.+++++..+..+....
T Consensus 328 ~vdiR~~P~~~~e~v~~~l~~~i~~~~~~~v~~~~~~-------~~~p~--~~~~~~~~v~~l~~a~~~~~g~~~~~~~~ 398 (469)
T PRK07079 328 VCQLRFVVGTDWENLAPHLRAHLDAHGFPMVEVTVER-------GSPAT--RLDPDDPWVRWALASIARTTGKKPALLPN 398 (469)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC-------CCCce--ecCCCCHHHHHHHHHHHHHhCCCCceecC
Confidence 999999999999999999999987432 234444331 23333 3677899999999999998665423222
Q ss_pred ecCCcchHHHHh-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 373 FPASTDARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 373 ~~g~tD~~~~~~-~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
.+|++|+++|.. .|+|++.||++..+ ..+|++||+++++++.+++++|..++..++..
T Consensus 399 ~~g~~d~~~~~~~~giP~v~~g~~~~~-~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 399 LGGSLPNDVFADILGLPTLWVPHSYPA-CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred CCcchhHHHHHHHhCCCEEEecCCCCC-ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 346679888875 69999987654322 25799999999999999999999999999654
No 32
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.3e-51 Score=404.69 Aligned_cols=343 Identities=20% Similarity=0.254 Sum_probs=282.8
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCCC
Q 013368 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPS 107 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~ 107 (444)
+++++++++|++|||+| ++|.++++||.++|+++|++++..... +.+|+++ + +.|+|+|+|||||||...
T Consensus 2 ~~~~~~~~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~~~-~~~~~~~---~---~~~~i~l~~H~D~vp~~~- 71 (347)
T PRK08652 2 ERAKELLKQLVKIPSPS--GQEDEIALHIMEFLESLGYDVHIESDG-EVINIVV---N---SKAELFVEVHYDTVPVRA- 71 (347)
T ss_pred hhHHHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCEEEEEecC-ceeEEEc---C---CCCEEEEEccccccCCCC-
Confidence 57899999999999996 788999999999999999998765432 3567776 2 237899999999999752
Q ss_pred CCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCce
Q 013368 108 KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (444)
Q Consensus 108 ~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~ 187 (444)
+| .++ ||++||||++|||++++++|.|++.|.+.. .+++|.|+|++|||.|+ .|++.++++. . .|+
T Consensus 72 ----~~---~~~-~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~-~G~~~~~~~~--~-~d~ 137 (347)
T PRK08652 72 ----EF---FVD-GVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGG-RGSALFAERY--R-PKM 137 (347)
T ss_pred ----CC---EEE-CCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCC-hhHHHHHHhc--C-CCE
Confidence 23 365 999999999999999999999999998643 46799999999999986 6999998753 2 377
Q ss_pred EEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCce
Q 013368 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVV 266 (444)
Q Consensus 188 ~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~ 266 (444)
+++.+ |+. ..+.++++|..+++|+++|+++|++.|+.+ ||+..++++++.|..+.... ... ..+
T Consensus 138 ~i~~e-----p~~-~~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~----~~~-----~~~ 202 (347)
T PRK08652 138 AIVLE-----PTD-LKVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKAL----GKY-----FDP 202 (347)
T ss_pred EEEec-----CCC-CceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhh----hcc-----cCC
Confidence 88875 543 468899999999999999999999999988 99999999999998754321 000 113
Q ss_pred eeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCcccc
Q 013368 267 SVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTAT 346 (444)
Q Consensus 267 t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 346 (444)
+++++.+++|. ..|++|++|++.+|+|+++.++.+++.++|++.++. .++++++.. .. |+. ..
T Consensus 203 ~~~~~~i~gg~------~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~v~~~~~~-------~~-~~~-~~ 265 (347)
T PRK08652 203 HIGIQEIIGGS------PEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE--YTVKYEYTE-------IW-DGF-EL 265 (347)
T ss_pred CCcceeeecCC------CCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh--cCceEEEec-------cC-Ccc-cC
Confidence 46677788886 889999999999999999999999999999988852 345555442 22 333 35
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIK 426 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~ 426 (444)
+.++++++.+.+++++.+.++ .+...+|+||+++|+..|+|++.|||+... .+|++||+++++++.+++++|.+++.
T Consensus 266 ~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tDa~~~~~~gip~v~~Gpg~~~--~~H~~nE~i~i~~l~~~~~~l~~~~~ 342 (347)
T PRK08652 266 DEDEEIVQLLEKAMKEVGLEP-EFTVMRSWTDAINFRYNGTKTVVWGPGELD--LCHTKFERIDVREVEKAKEFLKALNE 342 (347)
T ss_pred CCCCHHHHHHHHHHHHhCCCC-CcCcCCccchhHHHHHCCCCEEEECCCchh--hcCCCCceeeHHHHHHHHHHHHHHHH
Confidence 678999999999999984433 556677899999999999999999998654 69999999999999999999999998
Q ss_pred HHH
Q 013368 427 AYA 429 (444)
Q Consensus 427 ~l~ 429 (444)
.+.
T Consensus 343 ~~~ 345 (347)
T PRK08652 343 ILL 345 (347)
T ss_pred HHh
Confidence 875
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=2.4e-50 Score=396.86 Aligned_cols=342 Identities=19% Similarity=0.220 Sum_probs=275.2
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~ 106 (444)
.+++++++++|++|||++ ++|.++++|+.++|+++|++++... ..|+++.+ |. +.|+|+|+||+||||..
T Consensus 5 ~~~~~~~l~~Lv~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~----~~n~i~~~-~~--~~~~l~~~~H~DtVp~~- 74 (348)
T PRK04443 5 ALEARELLKGLVEIPSPS--GEEAAAAEFLVEFMESHGREAWVDE----AGNARGPA-GD--GPPLVLLLGHIDTVPGD- 74 (348)
T ss_pred hHHHHHHHHHHHcCCCCC--CChHHHHHHHHHHHHHcCCEEEEcC----CCcEEEEc-CC--CCCEEEEEeeccccCCC-
Confidence 377999999999999986 6888999999999999999886432 35899987 43 24899999999999953
Q ss_pred CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCc
Q 013368 107 SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLN 186 (444)
Q Consensus 107 ~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d 186 (444)
.|| +++ +|++||||++|||++++++|.|++.| +.+++++|.|+++++||.|+ .|...++.++ . ..|
T Consensus 75 -----~p~--~~~-~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~-~~~~~~l~~~-~-~~d 140 (348)
T PRK04443 75 -----IPV--RVE-DGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPS-SGGARLVADR-E-RPD 140 (348)
T ss_pred -----CCc--Eee-CCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCC-hhHHHHHHhc-c-CCC
Confidence 365 466 99999999999999999999999998 34678999999999999987 4555555543 3 358
Q ss_pred eEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCc
Q 013368 187 VGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEV 265 (444)
Q Consensus 187 ~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~ 265 (444)
++++.+ |++...++++++|..+++|+++|+++|||.| + ||+..++++++.|..+... ..........
T Consensus 141 ~~iv~E-----pt~~~~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~-----~~~~~~~~~~ 208 (348)
T PRK04443 141 AVIIGE-----PSGWDGITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEA-----NDGRERVFDQ 208 (348)
T ss_pred EEEEeC-----CCCccceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhc-----Cccccccccc
Confidence 888774 6553468899999999999999999999976 6 9999999999999875320 0000011123
Q ss_pred eeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccc
Q 013368 266 VSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTA 345 (444)
Q Consensus 266 ~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 345 (444)
++++++.++ . ..|+||++|++.+|+|+.|.++.++++++|++.+. .+++++. ...|++ .
T Consensus 209 ~~~~i~~i~--~------~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~----~~~~~~~--------~~~~~~-~ 267 (348)
T PRK04443 209 VTPKLVDFD--S------SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP----TGTVTFT--------GAVPAY-M 267 (348)
T ss_pred cceeeeEEe--c------CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC----CcEEEEe--------cCCCce-e
Confidence 567787777 2 56899999999999999999999999999988873 2344443 223433 3
Q ss_pred cCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHh-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 013368 346 TDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESI 424 (444)
Q Consensus 346 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~-~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 424 (444)
++.++++++.+.+++++.++.+ .....+|++|++++.+ .|+|++.|||+... .+|++||+++++++.+++++|+.+
T Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~g~tD~~~~~~~~gip~v~~Gpg~~~--~~H~~dE~i~i~~l~~~~~~~~~~ 344 (348)
T PRK04443 268 VSKRTPLARAFRVAIREAGGTP-RLKRKTGTSDMNVVAPAWGCPMVAYGPGDSD--LDHTPDEHLPLAEYLRAIAVLTDV 344 (348)
T ss_pred cCCCCHHHHHHHHHHHHhcCCc-ceeccccCCcHHHHhhhcCCCEEEECCCCcc--ccCCCcccccHHHHHHHHHHHHHH
Confidence 5678999999999999987754 4445679999999986 59999999998653 689999999999999999999999
Q ss_pred HHHH
Q 013368 425 IKAY 428 (444)
Q Consensus 425 l~~l 428 (444)
+.+|
T Consensus 345 ~~~l 348 (348)
T PRK04443 345 LERL 348 (348)
T ss_pred HhhC
Confidence 8764
No 34
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-50 Score=402.29 Aligned_cols=381 Identities=24% Similarity=0.408 Sum_probs=299.7
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCC--CCeEEEEecCCCCCCCcEEEEeeccccc
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKN--KPLILLKWPGSNPQLPSILLNSHTDVVP 103 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~--~~nl~~~~~g~~~~~~~i~l~~H~Dtvp 103 (444)
..++.++++++|+++||+| ..++.+++++++++|+++|+.++.+..... .+|+++.+.+..++ |+|+|+||+||||
T Consensus 11 ~~~~~~~~l~~lv~~~s~s-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~l~l~~H~DvVP 88 (409)
T COG0624 11 LLDDILELLKELVRIPSVS-AGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGG-PTLLLGGHLDVVP 88 (409)
T ss_pred hhHHHHHHHHHHhcCCCCC-cccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCC-CeEEEeccccccC
Confidence 4577889999999999997 468889999999999999999887665322 56999999765433 8999999999999
Q ss_pred CCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccc-
Q 013368 104 SEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV- 181 (444)
Q Consensus 104 ~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~- 181 (444)
.++ +.|+++||+++++ +|+|||||++||||++++++.|++.+.+.+..++++|.+++++|||+++ .|+..++.++.
T Consensus 89 ~g~~~~W~~~Pf~~~~~-dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~-~~~~~~~~~~~~ 166 (409)
T COG0624 89 AGGGEDWTTDPFEPTIK-DGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGG-AGGKAYLEEGEE 166 (409)
T ss_pred CCCcccCccCCCccEEE-CCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCC-cchHHHHHhcch
Confidence 998 8999999999998 8999999999999999999999999999877889999999999999998 67877777653
Q ss_pred --cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCC--CCCC-CHHHHHHHHHHH----HHhchhhhh
Q 013368 182 --FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK--LYDN-SAMENLFKSIES----VRRFRASQF 252 (444)
Q Consensus 182 --~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~--p~~g-nai~~~~~~i~~----l~~l~~~~~ 252 (444)
....|++++.+.... ......++.+++|..+++|+++|+++|+|. |+.+ |++..++..+.. +.++....+
T Consensus 167 ~~~~~~d~~i~~E~~~~-~~~~~~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~ 245 (409)
T COG0624 167 ALGIRPDYEIVGEPTLE-SEGGDIIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGF 245 (409)
T ss_pred hhccCCCEEEeCCCCCc-ccCCCeEEEcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccc
Confidence 133588888765211 123356777999999999999999999998 7777 955444444444 433222110
Q ss_pred HHHHhchhccCCceeeeeeeeccCCC--CCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCC--CceEEE
Q 013368 253 DLVKAGLKAEGEVVSVNMAFLKAGTP--SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASR--NMTFEF 328 (444)
Q Consensus 253 ~~~~~~~~~~~~~~t~~~~~i~~G~~--~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~--~~~~~~ 328 (444)
. ...+++++.+.++.. ..++...|+||++|++.+|+|+.|.++.+++.+++++.++.... .++.++
T Consensus 246 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~ 315 (409)
T COG0624 246 ---------D-GPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEI 315 (409)
T ss_pred ---------c-CCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEe
Confidence 0 035667776666653 23444679999999999999999999999988888888864332 455555
Q ss_pred eecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCcc
Q 013368 329 KQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEF 408 (444)
Q Consensus 329 ~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~ 408 (444)
.. ....++. .++.++++++.+.+++++..+........++++|+.+++..++|++.|||+..+ .+|++||+
T Consensus 316 ~~------~~~~~~~-~~~~~~~~v~~l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~~~~fgp~~~~--~~H~~~E~ 386 (409)
T COG0624 316 EP------GLGEPPL-PVPGDSPLVAALAEAAEELLGLPPEVSTGGGTHDARFFARLGIPAVIFGPGDIG--LAHQPNEY 386 (409)
T ss_pred cc------ccCCccc-cCCCchHHHHHHHHHHHHhhCCCceecCCCCcchHHHHHhcCCeeEEECCCCcc--cccCCCce
Confidence 42 1123332 367789999999999999765432333444568999999999999999999864 79999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHc
Q 013368 409 LNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 409 i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
++++++.+++++|+.++..++.
T Consensus 387 v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 387 VELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred eeHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999864
No 35
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=3.9e-50 Score=408.55 Aligned_cols=369 Identities=20% Similarity=0.297 Sum_probs=282.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCC----------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcE
Q 013368 24 AKSDDSIIERFRAYLQIDTSQPN----------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (444)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i 93 (444)
+++.++++++|++|++|||+++. .++.++++++.++|+++||+++.++. .++.+.+. ++.++|
T Consensus 9 ~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~~------~~~~~~~~-~~~~~l 81 (466)
T TIGR01886 9 EARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFDN------YAGHVEYG-AGDERL 81 (466)
T ss_pred HHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEecC------CceeEEec-CCCCEE
Confidence 45678899999999999999742 34677888999999999999886542 33332221 234799
Q ss_pred EEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccH
Q 013368 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (444)
Q Consensus 94 ~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (444)
+|+||+||||++ +.|+++||++.++ ||+|||||++||||+++++|.|+++|++.+.+++++|.|++.++||+|+ .|+
T Consensus 82 ~~~gH~DvVp~~-~~W~~~Pf~~~~~-dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~ 158 (466)
T TIGR01886 82 GIIGHMDVVPAG-EGWTRDPFEPEID-EGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGW-VDM 158 (466)
T ss_pred EEEeecccCCCC-CCCcCCCCCeEEE-CCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCc-ccH
Confidence 999999999997 5699999999998 9999999999999999999999999999988899999999999999986 799
Q ss_pred HHHHhccccccCceEEEeccCCC----CcCCcce---------------------------------ee-----------
Q 013368 174 EKFADSHVFNSLNVGIVLDEGLA----STTEDYR---------------------------------AF----------- 205 (444)
Q Consensus 174 ~~~~~~~~~~~~d~~~~~~~g~~----~p~~~~~---------------------------------i~----------- 205 (444)
+++++++.. .|++++.|.+.. +++. .. ++
T Consensus 159 ~~~~~~~~~--~d~~~~~d~~~~~~~ge~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~ 235 (466)
T TIGR01886 159 DYYFKHEET--PDFGFSPDAEFPIINGEKGN-FTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAA 235 (466)
T ss_pred HHHHhcCcC--CCEEEECCCCceeEEEecce-EEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHH
Confidence 999986542 365544432110 1111 01 11
Q ss_pred ----ecccccE---------EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhc--hhhhhHHHHh---------c--
Q 013368 206 ----YAERCPW---------WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRF--RASQFDLVKA---------G-- 258 (444)
Q Consensus 206 ----~~~~G~~---------~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l--~~~~~~~~~~---------~-- 258 (444)
.+++|.. +++|+++|+++|||.|+.| |||..+++++..+..- ....++.+.. .
T Consensus 236 ~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (466)
T TIGR01886 236 YESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLG 315 (466)
T ss_pred HHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCC
Confidence 2345544 7889999999999999999 9999999988773100 0000010100 0
Q ss_pred ---hhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeeccccc
Q 013368 259 ---LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLH 335 (444)
Q Consensus 259 ---~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (444)
.......+|+|++.|++|. . | ++|++.+|+|++|.++.+++.++|++.+.. .+++++..
T Consensus 316 ~~~~~~~~g~~S~nvgvI~gG~------~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~---~~~v~~~~----- 377 (466)
T TIGR01886 316 IAFHDELMGDLAMNAGMFDFDH------A-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG---IVDVTYNG----- 377 (466)
T ss_pred CcccccCcCceEEEeEEEEEec------C-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc---ccEEEEec-----
Confidence 0011235789999999985 3 3 799999999999999999999999888863 23444321
Q ss_pred ccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHH
Q 013368 336 DKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYL 415 (444)
Q Consensus 336 ~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~ 415 (444)
....|.+ .+.++++++.+.++++++.+..+.+...+|+||+++|. .++|...|||++.. ++|++||+++++++.
T Consensus 378 -~~~~P~~--~~~ds~lv~~l~~a~~~v~G~~~~~~~~~ggTDa~~~~-~~i~~gv~gPG~~~--~aH~~dE~V~i~el~ 451 (466)
T TIGR01886 378 -HFEEPHY--VPGSDPLVQTLLKVYEKHTGKKGHEVIIGGGTYGRLLE-RGVAYGAMFEGGPD--VMHQANEFMMLDDLI 451 (466)
T ss_pred -ccCCCcc--cCCCCHHHHHHHHHHHHHhCCCCceeeecCccHHHhcc-cccccccccCCCCC--CccCCCcceEHHHHH
Confidence 1234544 56678999999999999877554555678999999998 47888889999764 799999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013368 416 KGIDIYESIIKAYA 429 (444)
Q Consensus 416 ~~~~~~~~~l~~l~ 429 (444)
+++++|..++..++
T Consensus 452 ~a~~iy~~~i~~l~ 465 (466)
T TIGR01886 452 LAAAIYAEAIYELA 465 (466)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999885
No 36
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.3e-49 Score=394.60 Aligned_cols=342 Identities=19% Similarity=0.214 Sum_probs=264.4
Q ss_pred HHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCC---CC
Q 013368 33 RFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP---SK 108 (444)
Q Consensus 33 ~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~---~~ 108 (444)
+|++|++|||+| ++|.+++++|.++|+++|+. .+... . ..||++.+.+ ++ .++|+|+|||||||.++ ..
T Consensus 1 ll~~Lv~ipS~s--~~e~~~~~~i~~~l~~~g~~~~~~~~-~--~~nvva~~~~-~~-~~~l~l~gH~DtVp~~~~~~~~ 73 (373)
T TIGR01900 1 LLQQIMDIFSPS--DHEGPIADEIEAALNNLELEGLEVFR-F--GDNVLARTDF-GK-ASRVILAGHIDTVPIADNFPPK 73 (373)
T ss_pred ChHHHhCCCCCC--chHHHHHHHHHHHHhhccccCceEEE-E--CCEEEEecCC-CC-CCeEEEeCccccccCCCCChhh
Confidence 478999999996 78899999999999999754 22222 1 2499998743 22 47899999999999863 46
Q ss_pred CccCCC--------cceecCCCeEEecCcccchhHHHHHHHHHHHHHH--cCCCCcceEEEEeecCcccCc-cccHHHHH
Q 013368 109 WSHHPF--------GAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA--SGFQPVRSVYLSFVPDEEIGG-HDGAEKFA 177 (444)
Q Consensus 109 W~~~Pf--------~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE~g~-~~G~~~~~ 177 (444)
|+++|| .+.++ ||++||||++|||++++++|.|++.|.+ .+..++++|.|+++++||.++ ..|+..++
T Consensus 74 W~~~p~~~~~~~~~~~~~~-~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~ 152 (373)
T TIGR01900 74 WLEPGDSLIREEIAHAHPE-DGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIR 152 (373)
T ss_pred hccCccccccccccccccc-CCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHH
Confidence 998775 46786 9999999999999999999999999964 344678999999999999863 25999998
Q ss_pred hccc-cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHH
Q 013368 178 DSHV-FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLV 255 (444)
Q Consensus 178 ~~~~-~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~ 255 (444)
+... +...|++++.+ |+. ..++++++|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+......
T Consensus 153 ~~~~~~~~~d~~iv~E-----pt~-~~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~-- 224 (373)
T TIGR01900 153 DAHPDWLAADFAIIGE-----PTG-GGIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVN-- 224 (373)
T ss_pred HhCcccccCCEEEEEC-----CCC-CcccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhccccc--
Confidence 8642 22457777763 654 578999999999999999999999999999 9999999999999876431110
Q ss_pred HhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc-----------CC--C
Q 013368 256 KAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-----------AS--R 322 (444)
Q Consensus 256 ~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~-----------~~--~ 322 (444)
........+++++.++||. ..|+||++|++++|+|+.|.++.+++.+.|+++++. .. .
T Consensus 225 ---~~~~~~~~t~~v~~I~GG~------~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
T TIGR01900 225 ---IDGLDYREGLNATFCEGGK------ANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFD 295 (373)
T ss_pred ---ccCCcccceEEEEEEeCCC------CCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhcccc
Confidence 0011123689999999987 899999999999999999999999999998644221 00 1
Q ss_pred C-ceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCC
Q 013368 323 N-MTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPIL 401 (444)
Q Consensus 323 ~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~ 401 (444)
+ .+++++. ....|.. .++.++++++.+.++++++.+..+. ...|+||++++...|+|++.|||++.. +
T Consensus 296 ~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~--~~~g~tD~~~~~~~gip~v~~Gpg~~~--~ 364 (373)
T TIGR01900 296 GQDGIEIAM------EDEAGGA-LPGLGAPLAQDLIDAVGEEKGRDPL--AKFGWTDVARFSALGIPALNFGAGDPL--F 364 (373)
T ss_pred ccccceEEE------cccCCCC-CCCCCCHHHHHHHHHHHhccCCCcc--cccCCccHHHHHhcCCCEEEeCCCChh--h
Confidence 1 1233332 0122222 2455789999999999998665423 367889999999889999999999764 7
Q ss_pred CCCCCcccc
Q 013368 402 LHDHNEFLN 410 (444)
Q Consensus 402 ~H~~~E~i~ 410 (444)
+|++|||++
T Consensus 365 aH~~dE~v~ 373 (373)
T TIGR01900 365 AHKHDEQCP 373 (373)
T ss_pred ccCCCCCCC
Confidence 999999985
No 37
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=6.2e-49 Score=388.03 Aligned_cols=342 Identities=18% Similarity=0.232 Sum_probs=274.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC-CCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~-G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
.+++++++++|++|||+| ++|.++++||+++|+++ |+++... ..|+++++.+ +. .++|+|+||+||||+.
T Consensus 6 ~~~~~~~l~~li~ips~s--~~e~~~~~~l~~~l~~~~~~~~~~~-----~~~~~~~~~~-~~-~~~i~l~~H~Dtvp~~ 76 (352)
T PRK13007 6 AADLAELTAALVDIPSVS--GDEKALADAVEAALRALPHLEVIRH-----GNSVVARTDL-GR-PSRVVLAGHLDTVPVA 76 (352)
T ss_pred HHHHHHHHHHHhcCCCCC--chHHHHHHHHHHHHHhCcCceEEec-----CCeEEEEccC-CC-CCeEEEEccccccCCC
Confidence 478999999999999996 78899999999999996 8876532 3489999842 22 2579999999999986
Q ss_pred CCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCcc-ccHHHHHhcc-ccc
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH-DGAEKFADSH-VFN 183 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~-~G~~~~~~~~-~~~ 183 (444)
+ ||++.++ ||++||||++|||+++|++|.|++.|. +++++|.|+|+++||.++. .|+..+++.. .+.
T Consensus 77 ~------~~~~~~~-~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~ 145 (352)
T PRK13007 77 D------NLPSRRE-GDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWL 145 (352)
T ss_pred C------CCCccee-CCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhccccc
Confidence 3 5666787 999999999999999999999999983 3678999999999998642 4888888753 233
Q ss_pred cCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhcc
Q 013368 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (444)
Q Consensus 184 ~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 262 (444)
..|++++.+ |+. ..++++++|..+++|+++|+++|||.|+.+ ||+..+++++..|..+...... ....
T Consensus 146 ~~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~-----~~~~ 214 (352)
T PRK13007 146 AGDFAILLE-----PTD-GVIEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVV-----VDGL 214 (352)
T ss_pred CCCEEEEec-----CCC-CceEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccc-----cCCC
Confidence 468888875 543 568899999999999999999999999988 9999999999999876432100 0001
Q ss_pred CCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCC
Q 013368 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPI 342 (444)
Q Consensus 263 ~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (444)
....+++++.++||. ..|+||++|++.+|+|++|.++.+++.++|++.+.... ++++.. ...|.
T Consensus 215 ~~~~~~~~~~i~gG~------~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~---~~~~~~-------~~~~~ 278 (352)
T PRK13007 215 TYREGLNAVRISGGV------AGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA---EVEVTD-------LAPGA 278 (352)
T ss_pred CccceeEeEeEecCC------cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc---EEEeec-------ccCCC
Confidence 113578999999886 89999999999999999999999999999998886322 444432 22232
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013368 343 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 422 (444)
Q Consensus 343 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 422 (444)
....++++++.+.+++ +... ....|+||+++++..|+|++.|||+... .+|++||+++++++.+++++|.
T Consensus 279 --~~~~~~~~~~~~~~~~---g~~~---~~~~g~td~~~~~~~Gip~v~~Gpg~~~--~~H~~~E~v~i~~l~~~~~~~~ 348 (352)
T PRK13007 279 --RPGLDHPAAAALVAAV---GGEV---RAKYGWTDVARFSALGIPAVNFGPGDPA--LAHQRDEHVPVAQITACARILR 348 (352)
T ss_pred --CCCCCCHHHHHHHHHh---CCCC---ccccccchHHHHHhCCCCEEEeCCCchh--hccCCCCceEHHHHHHHHHHHH
Confidence 2456889988888863 3222 2346889999999999999999998654 7999999999999999999999
Q ss_pred HHH
Q 013368 423 SII 425 (444)
Q Consensus 423 ~~l 425 (444)
.++
T Consensus 349 ~~~ 351 (352)
T PRK13007 349 RWL 351 (352)
T ss_pred HHh
Confidence 886
No 38
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.2e-48 Score=387.32 Aligned_cols=349 Identities=20% Similarity=0.233 Sum_probs=283.7
Q ss_pred HHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC---CCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~---~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
++++++++|++|||++ ++|.++++||.++|+++|++++.++... +++|+++.++|.++ .|+|+|.||+||||.+
T Consensus 1 ~~~~~~~~l~~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~l~~H~D~V~~~ 77 (361)
T TIGR01883 1 RLKKYFLELIQIDSES--GKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVK-FDTIFFCGHMDTVPPG 77 (361)
T ss_pred ChHHHHHHHeecCCCC--CcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCC-CCcEEEEeeccccCCC
Confidence 4678999999999996 6899999999999999999987654321 36799999976543 4899999999999985
Q ss_pred CCCCccCCCcceecCCCeEEecCc----ccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccc
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHV 181 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (444)
+ ||.+.++ +|++||||+ +|||++++++|.+++.|.+.+ .++++|.|+|+++||.|+ .|++.+.+..
T Consensus 78 ~------~~~~~~~-~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~-~G~~~~~~~~- 147 (361)
T TIGR01883 78 A------GPEPVVE-DGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGL-IGMRLFDESK- 147 (361)
T ss_pred C------CCCceec-CCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCc-hhHhHhChhh-
Confidence 2 3455676 999999999 999999999999999998876 467899999999999885 7999887643
Q ss_pred cccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccC-CCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhch
Q 013368 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (444)
Q Consensus 182 ~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~ 259 (444)
+. .+++++++.+ .....++.+++|..+++|+++|+++|+| .|+.| ||+..+++++.+|.....
T Consensus 148 ~~-~~~~~~~~~~----~~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~---------- 212 (361)
T TIGR01883 148 IT-AAYGYCLDAP----GEVGNIQLAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGRI---------- 212 (361)
T ss_pred cC-cceeEEEeCC----CCcceEEecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccCC----------
Confidence 22 4677887642 1124688899999999999999999986 59998 999999999988864211
Q ss_pred hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeeccccccc
Q 013368 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDK 337 (444)
Q Consensus 260 ~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 337 (444)
...++++++.+++|. ..|+||++|++.+|+|+.+..+.+.+.++|++.++.. ..+.++++...
T Consensus 213 ---~~~~~~~i~~i~gG~------~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~------ 277 (361)
T TIGR01883 213 ---DEETTANIGSFSGGV------NTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETR------ 277 (361)
T ss_pred ---CCccccccceeecCC------ccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEE------
Confidence 123578899999987 8999999999999999999998888888888877632 23455555421
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHH
Q 013368 338 FGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKG 417 (444)
Q Consensus 338 ~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~ 417 (444)
...|++ .++.++++++++.+++++.+.++ .....+|+||++++...|+|++.|||+.. .+|++||+++++++.++
T Consensus 278 ~~~~~~-~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tD~~~~~~~giP~v~~G~g~~---~~Hs~~E~v~i~~~~~~ 352 (361)
T TIGR01883 278 LIYEGF-KIHPQHPLMNIFKKAAKKIGLKT-SEIFSGGGSDANVLNEKGVPTVNLSAGYV---HAHTEKETISIEQLVKL 352 (361)
T ss_pred eccccc-cCCCCCHHHHHHHHHHHHcCCCc-EEEecCcccHHHHHhhCCCceEEECCCcc---cCcCcceeEEHHHHHHH
Confidence 223333 35678899999999999865543 44456789999999999999999999974 69999999999999999
Q ss_pred HHHHHHHH
Q 013368 418 IDIYESII 425 (444)
Q Consensus 418 ~~~~~~~l 425 (444)
+++|.+++
T Consensus 353 ~~~~~~~~ 360 (361)
T TIGR01883 353 AELVIALA 360 (361)
T ss_pred HHHHHHHh
Confidence 99999986
No 39
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=2.7e-48 Score=380.66 Aligned_cols=333 Identities=23% Similarity=0.286 Sum_probs=268.7
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCCCCCcc
Q 013368 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSH 111 (444)
Q Consensus 32 ~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~ 111 (444)
+++++|++|||+| ++|.++++||+++|+++|+++. .+ ...|+++.. +. +.|+|+|+||+||||.
T Consensus 1 ~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~-~~---~~~~~~~~~-~~--~~~~i~~~~H~D~vp~------- 64 (336)
T TIGR01902 1 ELLKDLLEIYSPS--GKEANAAKFLEEISKDLGLKLI-ID---DAGNFILGK-GD--GHKKILLAGHVDTVPG------- 64 (336)
T ss_pred ChHHHHhcCCCCC--cchHHHHHHHHHHHHHcCCEEE-EC---CCCcEEEEe-CC--CCceEEEEccccccCC-------
Confidence 3689999999986 7889999999999999999884 22 345888865 33 3589999999999985
Q ss_pred CCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEe
Q 013368 112 HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVL 191 (444)
Q Consensus 112 ~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~ 191 (444)
+|...++ ||++||||++|||++++++|.|++.|.+. +.+|.|+++++||.|+ .|++++++... .+++++.
T Consensus 65 -~~~~~~~-~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~-~G~~~~~~~~~---~~~~ii~ 134 (336)
T TIGR01902 65 -YIPVKIE-GGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSS-KGAREVIDKNY---PFYVIVG 134 (336)
T ss_pred -CcccEEe-CCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCC-ccHHHHHhhcC---CCEEEEe
Confidence 2456676 99999999999999999999999999754 4689999999999986 79999998643 2456665
Q ss_pred ccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHH-hchhhhhHHHHhchhccCCceeeee
Q 013368 192 DEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVR-RFRASQFDLVKAGLKAEGEVVSVNM 270 (444)
Q Consensus 192 ~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~-~l~~~~~~~~~~~~~~~~~~~t~~~ 270 (444)
+ |++...++.+++|..+++++++|+++|+|.|. ||+..++.+++.|. .+... .. -..+++++
T Consensus 135 e-----pt~~~~i~~~~kG~~~~~v~~~G~~~Hss~~~--~ai~~~~~~~~~l~~~~~~~--------~~--~~~~~~~~ 197 (336)
T TIGR01902 135 E-----PSGAEGITLGYKGSLQLKIMCEGTPFHSSSAG--NAAELLIDYSKKIIEVYKQP--------EN--YDKPSIVP 197 (336)
T ss_pred c-----CCCCcceeeeeeeEEEEEEEEEecCcccCCCh--hHHHHHHHHHHHHHHHhccc--------cC--CCCCccee
Confidence 4 66544688999999999999999999999765 69999999998886 23210 00 01246788
Q ss_pred eeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCC
Q 013368 271 AFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSN 350 (444)
Q Consensus 271 ~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 350 (444)
+.+++|. ..|+||++|++++|+|+.|.++.+++.++|++. ..+++++.. ...|. .++.++
T Consensus 198 ~~i~gg~------~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~~-----~~~~~~~~~-------~~~p~--~~~~~~ 257 (336)
T TIGR01902 198 TIIRFGE------SYNDTPAKLELHFDLRYPPNNKPEEAIKEITDK-----FPICLEIVD-------ETPPY--KVSRNN 257 (336)
T ss_pred EEEEccC------CCcCCCceEEEEEEEeeCCCCCHHHHHHHHHhc-----cCceEEEEe-------ccCce--ecCCCC
Confidence 8888887 899999999999999999999999998888751 223443331 23343 256789
Q ss_pred hHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhc-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 351 PWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 351 ~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~-gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
++++++.+++++.+..+ .+...+|++|++++.+. |+|++.|||+... .+|++||+++++++.+++++|..++..++
T Consensus 258 ~lv~~~~~a~~~~~~~~-~~~~~~g~tD~~~~~~~~g~p~v~~Gpg~~~--~aH~~nE~v~i~~l~~~~~~~~~~l~~l~ 334 (336)
T TIGR01902 258 PLVRAFVRAIRKQGMKP-RLKKKTGTSDMNILAPIWTVPMVAYGPGDST--LDHTPQEKISLAEYLIGIKTLMLAIEELW 334 (336)
T ss_pred HHHHHHHHHHHHcCCCe-EEeeccccCccceeccccCCCeEEECCCCcc--cCCCCcceeEHHHHHHHHHHHHHHHHHHh
Confidence 99999999999987543 44456788999999886 9999999999764 68999999999999999999999999885
Q ss_pred c
Q 013368 430 S 430 (444)
Q Consensus 430 ~ 430 (444)
.
T Consensus 335 ~ 335 (336)
T TIGR01902 335 Q 335 (336)
T ss_pred c
Confidence 4
No 40
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=1.2e-48 Score=392.54 Aligned_cols=360 Identities=19% Similarity=0.232 Sum_probs=278.7
Q ss_pred HHHHHHHhhhcccCCCCC--------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 29 SIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~--------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
..++.+.+|++|||+|.. .++.++++||.++|+++|++...++ +++||+++++|++++.|+|+|+||+|
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~---~~~nvi~~~~g~~~~~~~lll~~H~D 78 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVID---EHAIVTAKLPGNTPGAPRIGFIAHLD 78 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEc---CCeEEEEEEecCCCCCCeEEEEEEec
Confidence 367889999999999842 3678999999999999999655443 67899999987655458999999999
Q ss_pred cccCCCC--------CCccCCCccee------------------cCCCeEEecCc----ccchhHHHHHHHHHHHHHHcC
Q 013368 101 VVPSEPS--------KWSHHPFGAHL------------------DSQGNIFARGS----QDMKCVGMQYLEAIRRLKASG 150 (444)
Q Consensus 101 tvp~~~~--------~W~~~Pf~~~~------------------~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~~ 150 (444)
|||.++. .|+.+||.+.. + ++++||||+ +|||++++++|.|++.|.+.+
T Consensus 79 ~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~ 157 (404)
T PRK13381 79 TVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQG-EDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE 157 (404)
T ss_pred CCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccC-CcEEeCCCccccccccHHHHHHHHHHHHHHHhcC
Confidence 9998753 25555544332 3 667999999 999999999999999998875
Q ss_pred CCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCC-CC
Q 013368 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-LY 229 (444)
Q Consensus 151 ~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p~ 229 (444)
.+.++|.|+|+++||.|+ .|++.++.++ +. .|+++++|.+ +|+ .++.+++|..+++|+++|+++|++. |+
T Consensus 158 -~~~g~i~~~~~~dEE~g~-~G~~~~~~~~-~~-~d~~~~~~~~--~~~---~i~~~~~G~~~~~v~v~Gk~aHa~~~p~ 228 (404)
T PRK13381 158 -VEHGDIVVAFVPDEEIGL-RGAKALDLAR-FP-VDFAYTIDCC--ELG---EVVYENFNAASAEITITGVTAHPMSAKG 228 (404)
T ss_pred -CCCCCEEEEEEccccccc-ccHHHHHHhc-CC-CCEEEEecCC--Ccc---eEEEecCcceEEEEEEEeEecCCCCCcc
Confidence 467899999999999985 7999997653 33 5778888754 343 5678899999999999999999875 77
Q ss_pred CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHH
Q 013368 230 DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAES 308 (444)
Q Consensus 230 ~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~ 308 (444)
.+ |||..+++++.+|..+.... .......+++++.+++ .|++|++.+|+|+.|.++.++
T Consensus 229 ~g~NAI~~a~~~i~~l~~~~~~~--------~~~~~~~~i~v~~i~g------------~p~~~~~~~diR~~~~~~~e~ 288 (404)
T PRK13381 229 VLVNPILMANDFISHFPRQETPE--------HTEGREGYIWVNDLQG------------NVNKAKLKLIIRDFDLDGFEA 288 (404)
T ss_pred cCcCHHHHHHHHHHhCCccCCCC--------CCCCcccEEEEEeEEe------------CcceEEEEEEEecCCHHHHHH
Confidence 77 99999999999997653211 0001112355554432 289999999999999999999
Q ss_pred HHHHHHHHhccC--CCC-ceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhc
Q 013368 309 LERRIVEEWAPA--SRN-MTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER 385 (444)
Q Consensus 309 i~~~i~~~~~~~--~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~ 385 (444)
+.+.|+++++.. ... .+++++... ....|.. .+..++++++++.+++++.+.++ .....+|+||+++|...
T Consensus 289 i~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~lv~~l~~a~~~~g~~~-~~~~~~g~tDa~~~~~~ 362 (404)
T PRK13381 289 RKQFIEEVVAKINAKYPTARVSLTLTD----QYSNISN-SIKDDRRAVDLAFDAMKELGIEP-KVIPMRGGTDGAALSAK 362 (404)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEEe----CCchhhc-ccccCHHHHHHHHHHHHHcCCCe-eeccCCccchHHHHhcC
Confidence 999998887642 122 344443210 1111222 35678999999999998865443 33456789999999988
Q ss_pred CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 386 GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 386 gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
|+|++.|||+.. .+|++||+++++++.+++++|..++..+++
T Consensus 363 giP~v~~GpG~~---~aH~~dE~v~i~~l~~~~~v~~~~~~~~~~ 404 (404)
T PRK13381 363 GLPTPNLFTGAH---NFHSRFEFLPVSSFVKSYEVTITICLLAAK 404 (404)
T ss_pred CCCeEEECcccc---CCcCcceeEEHHHHHHHHHHHHHHHHHhcC
Confidence 999999999974 499999999999999999999999988753
No 41
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.7e-48 Score=397.60 Aligned_cols=371 Identities=20% Similarity=0.287 Sum_probs=275.3
Q ss_pred CCCChhHHHHHHHhhhcccCCCCC----------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCc
Q 013368 23 PAKSDDSIIERFRAYLQIDTSQPN----------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPS 92 (444)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~ 92 (444)
.+++.++.+++|++|++|||+++. .++.++++||.++|+++|++++.++ |+++.+.... +.++
T Consensus 9 ~~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~------n~~~~~~~~~-~~~~ 81 (466)
T PRK07318 9 VEKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD------NYAGHIEYGE-GEEV 81 (466)
T ss_pred HHHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec------CccceEEECC-CCCE
Confidence 345778899999999999999743 2467899999999999999988553 5565543211 3478
Q ss_pred EEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCcccc
Q 013368 93 ILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDG 172 (444)
Q Consensus 93 i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G 172 (444)
|+|+||+||||.+ +.|+++||.++++ ||++||||++||||++++++.|++.|++.+.+++++|.|+|++|||.|+ .|
T Consensus 82 l~l~gH~DvVp~~-~~W~~~Pf~~~~~-dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~-~G 158 (466)
T PRK07318 82 LGILGHLDVVPAG-DGWDTDPYEPVIK-DGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW-KC 158 (466)
T ss_pred EEEEEecCCCCCC-CCCCCCCcceEEE-CCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc-hh
Confidence 9999999999986 4799999999998 9999999999999999999999999999888888999999999999986 79
Q ss_pred HHHHHhccccccCceEEEeccCCC----C----------------------------cCCc-------------------
Q 013368 173 AEKFADSHVFNSLNVGIVLDEGLA----S----------------------------TTED------------------- 201 (444)
Q Consensus 173 ~~~~~~~~~~~~~d~~~~~~~g~~----~----------------------------p~~~------------------- 201 (444)
++++++.+... ++.++.|.... + +++.
T Consensus 159 ~~~l~~~~~~~--~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~ 236 (466)
T PRK07318 159 MDYYFEHEEAP--DFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIA 236 (466)
T ss_pred HHHHHHhCCCC--CEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHH
Confidence 99999864221 22222221000 0 1100
Q ss_pred ----ceeeecccccE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchh--hhhHHHHh-----------c
Q 013368 202 ----YRAFYAERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRA--SQFDLVKA-----------G 258 (444)
Q Consensus 202 ----~~i~~~~~G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~--~~~~~~~~-----------~ 258 (444)
..+..++||.. +++|+++|+++|++.|+.| |||..+++++..|..... ..++.+.. +
T Consensus 237 ~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
T PRK07318 237 AFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLG 316 (466)
T ss_pred HHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCC
Confidence 00112567755 7999999999999999999 999999999998864210 01111110 0
Q ss_pred --h-hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeeccccc
Q 013368 259 --L-KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLH 335 (444)
Q Consensus 259 --~-~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (444)
. ...-..+|+|++.+++|. .. +|++.+|+|+.+.++.+++.++|++.++. .++++++..
T Consensus 317 ~~~~~~~~g~~t~nvg~i~gg~------~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~--~~~~~~~~~----- 378 (466)
T PRK07318 317 IAYEDDVMGDLTMNVGVFSFDE------EK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV--TGVELSEHE----- 378 (466)
T ss_pred CcccCCCccCeEEEeeEEEEec------Cc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh--cCeEEEEcc-----
Confidence 0 000124688999888874 21 79999999999999999999999888753 234333321
Q ss_pred ccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHH
Q 013368 336 DKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYL 415 (444)
Q Consensus 336 ~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~ 415 (444)
...|.. .+.++++++.+.+++++..+..+.+...+|+||++++.. ++|...++|++.. ++|++||+++++++.
T Consensus 379 --~~~p~~--~~~d~~lv~~l~~a~~~~~g~~~~~~~~~ggtDa~~~~~-~i~~Gp~~pg~~~--~aH~~dE~v~i~~l~ 451 (466)
T PRK07318 379 --HQKPHY--VPKDDPLVKTLLKVYEKQTGLKGEEQVIGGGTYARLLKR-GVAFGAMFPGSED--TMHQANEYIEIDDLI 451 (466)
T ss_pred --CCCcee--eCCCCHHHHHHHHHHHHHhCCCCCeeEEcchHhHhhCCC-eEEeCCCCCCCCC--CCcCCCcceeHHHHH
Confidence 233433 467899999999999986554435566788999999974 5543333355433 599999999999999
Q ss_pred HHHHHHHHHHHHHHc
Q 013368 416 KGIDIYESIIKAYAS 430 (444)
Q Consensus 416 ~~~~~~~~~l~~l~~ 430 (444)
+++++|..++.++++
T Consensus 452 ~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 452 KAAAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998863
No 42
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-48 Score=391.86 Aligned_cols=368 Identities=19% Similarity=0.239 Sum_probs=264.5
Q ss_pred CCChhHHHHHHHhhhcccCCCCCCC--------hhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEE
Q 013368 24 AKSDDSIIERFRAYLQIDTSQPNPD--------YTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILL 95 (444)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~~--------e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l 95 (444)
+++.++.+++|++|++|||+|+... ..+.++++.++|+++|++++.++. + .++++.+ |. +.++|+|
T Consensus 7 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~-~~~~~~~-g~--~~~~lll 80 (444)
T PRK07205 7 EKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPK--G-YYGYAEI-GQ--GEELLAI 80 (444)
T ss_pred HHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCC--C-eEEEEEe-cC--CCcEEEE
Confidence 4577899999999999999974321 256788888999999998875531 3 3666665 43 3478999
Q ss_pred EeecccccCCC-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHH
Q 013368 96 NSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (444)
Q Consensus 96 ~~H~Dtvp~~~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (444)
+||+||||+++ +.|+++||++.++ ||+|||||++||||+++++|.|++.|++.+.+++++|.|+|++|||+|+ .|++
T Consensus 81 ~gH~DvVp~~~~~~W~~~Pf~~~v~-dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~-~g~~ 158 (444)
T PRK07205 81 LCHLDVVPEGDLSDWQTPPFEAVEK-DGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLW-RCMN 158 (444)
T ss_pred EEeeccCCCCCcccCCCCCCceEEE-CCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCc-ccHH
Confidence 99999999975 7899999999998 9999999999999999999999999999888888999999999999987 6888
Q ss_pred HHHhcccccc----Cc--eEEEeccC-C------CCcCCcceee-------------------------eccccc----E
Q 013368 175 KFADSHVFNS----LN--VGIVLDEG-L------ASTTEDYRAF-------------------------YAERCP----W 212 (444)
Q Consensus 175 ~~~~~~~~~~----~d--~~~~~~~g-~------~~p~~~~~i~-------------------------~~~~G~----~ 212 (444)
.+++...... .| +.+++.+. . .+|+....+. ...+|. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~ 238 (444)
T PRK07205 159 RYNEVEEQATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVK 238 (444)
T ss_pred HHHhCCCCCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeec
Confidence 8887421100 01 11111110 0 0122100000 011232 2
Q ss_pred EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhch--------------hccCCceeeeeeeeccCC
Q 013368 213 WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL--------------KAEGEVVSVNMAFLKAGT 277 (444)
Q Consensus 213 ~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~--------------~~~~~~~t~~~~~i~~G~ 277 (444)
+.+|+++|+++|||.|+.| |||..+++++..|..+.. .+.+.... ......+|+|++
T Consensus 239 ~~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg------ 310 (444)
T PRK07205 239 ENEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEPHPA--LDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIA------ 310 (444)
T ss_pred CcEEEEEeEEcccCCCccCcCHHHHHHHHHHhccHHHH--HHHHHHhcCCCCccccCCccccCCCcCCceEEeE------
Confidence 3489999999999999988 999999999988864321 11010000 000012333432
Q ss_pred CCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHH
Q 013368 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLE 357 (444)
Q Consensus 278 ~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 357 (444)
..|+||++|++.+|+|+.|.++.+++.+.|+++++. .+++++... ...|. ..+.++++++.+.
T Consensus 311 ------~~nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~--~~v~~~~~~-------~~~p~--~~~~~~~lv~~l~ 373 (444)
T PRK07205 311 ------GLTITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQE--YGLTYEEFD-------YLAPL--YVPLDSELVSTLM 373 (444)
T ss_pred ------EEEEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH--cCcEEEEec-------CCCce--eeCCCcHHHHHHH
Confidence 457999999999999999999999999999888753 234433221 22332 2567899999999
Q ss_pred HHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEc---cCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 358 EAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFS---PMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 358 ~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~g---p~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
+++++..+....+..++|++|+..+ .|++.|| |+... .+|++||+++++++.+++++|..++.+++.
T Consensus 374 ~~~~~~~g~~~~~~~~gg~~~~~~~----~~~i~~G~~~Pg~~~--~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 374 SVYQEKTGDDSPAQSSGGATFARTM----PNCVAFGALFPGAPQ--TEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred HHHHHHhCCCCceEEeccHHHHHhC----CCcEEECCccCCCCC--CCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 9999876544244445566665433 5788999 76543 699999999999999999999999998753
No 43
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=2.6e-47 Score=385.69 Aligned_cols=368 Identities=14% Similarity=0.130 Sum_probs=286.2
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
..+.+.++.+.++.+|+.+ ++|.+++++|.++|+++|++++... +..|+++.+ |.++ .|+|+|+||||+||..
T Consensus 95 ~~~~l~~l~r~lh~~PEls--~~E~~t~~~i~~~L~~~G~~~~~~~---~~~~vva~~-g~~~-~~~I~l~gh~DaVP~~ 167 (478)
T PLN02280 95 TVAWLKSVRRKIHENPELA--FEEYKTSELVRSELDRMGIMYRYPL---AKTGIRAWI-GTGG-PPFVAVRADMDALPIQ 167 (478)
T ss_pred HHHHHHHHHHHHhcCCCCC--CcHHHHHHHHHHHHHHCCCeEEecC---CCCEEEEEE-CCCC-CCEEEEEEecCCCccc
Confidence 3455666677777777764 7899999999999999999987532 467999998 5433 3899999999999997
Q ss_pred C-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 106 ~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
+ .+|+++| ++ +|++|||| +|+++|++|+|++.|.+.+.+++++|.|+|+++||.| .|++++++++.+++
T Consensus 168 e~~~w~~~p----~~-~G~~h~cG---hd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g--~Ga~~li~~g~~~~ 237 (478)
T PLN02280 168 EAVEWEHKS----KV-AGKMHACG---HDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG--NGAKRMIGDGALDD 237 (478)
T ss_pred CCCCCCCCC----CC-CCeEEeCC---CcHHHHHHHHHHHHHHhccccCCceEEEEeccccccc--chHHHHHHCCCCcC
Confidence 5 6799999 44 99999999 3569999999999998887778999999999999986 39999999887776
Q ss_pred CceEEEeccCCCCcCCc--ceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhc
Q 013368 185 LNVGIVLDEGLASTTED--YRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKA 261 (444)
Q Consensus 185 ~d~~~~~~~g~~~p~~~--~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~ 261 (444)
.|..++++.+..+|++. .......+|..+++|+++|+++|+|.|+.| ||+..+++++..|+.+.... ..
T Consensus 238 ~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~--------~~ 309 (478)
T PLN02280 238 VEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSRE--------AN 309 (478)
T ss_pred CCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcc--------cC
Confidence 77777777544345421 112233459999999999999999999999 99999999999987753210 01
Q ss_pred cCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc--CCCCceEEEeecccccccCC
Q 013368 262 EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEFKQRASLHDKFG 339 (444)
Q Consensus 262 ~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~ 339 (444)
.....+++++.++||. ..|+||++|++.+|+|+.+.++.+++.++|+++++. ..++++++++.. ...
T Consensus 310 ~~~~~tvnvg~I~GG~------~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~-----~~~ 378 (478)
T PLN02280 310 PLDSQVVSVTTMDGGN------NLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFF-----EKQ 378 (478)
T ss_pred CCCCcEEEEEEEEccC------CCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe-----ccc
Confidence 1234689999999997 899999999999999999999999999999988764 234566655521 011
Q ss_pred CCCccccCCCChHHHHHHHHHHHhcCCC--CCceeecCCcchHHHHhcCCCeEEE--ccCCC---CCCCCCCCCccccHH
Q 013368 340 RPILTATDSSNPWWNLLEEAVRKANGKL--GKPEIFPASTDARYFRERGLPAIGF--SPMAN---TPILLHDHNEFLNQA 412 (444)
Q Consensus 340 ~p~~~~~~~~~~l~~~~~~a~~~~~~~~--~~~~~~~g~tD~~~~~~~gip~v~~--gp~~~---~~~~~H~~~E~i~~~ 412 (444)
.+.++++.++.++++.+.+++.+..+.. .......|++|+++|.+. +|++.| |++.. ....+|+++|+++++
T Consensus 379 ~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~-vP~i~~glG~~~~~~G~~~~~Htp~e~id~~ 457 (478)
T PLN02280 379 NTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQV-VPAAFYYIGIRNETLGSTHTGHSPYFMIDED 457 (478)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhh-CCEEEEEEeecCCCCCCCCCCCCCCCcCCHH
Confidence 2223346668899999999988765432 111234688999999985 999866 44321 112689999999999
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 013368 413 EYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 413 ~l~~~~~~~~~~l~~l~~ 430 (444)
++..++++|+.++.++.+
T Consensus 458 ~L~~~~~~~~~~~~~~l~ 475 (478)
T PLN02280 458 VLPIGAAVHAAIAERYLI 475 (478)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988764
No 44
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=4e-46 Score=375.63 Aligned_cols=371 Identities=20% Similarity=0.242 Sum_probs=267.9
Q ss_pred HHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 29 SIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~----~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
+.+++|++|++|||+++.+ .+.++++++.++|+++|++++.++.. +.+|+++.+ |. +.++|+|.||+||||+
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~-~~~~l~~~~-~~--~~~~l~l~gH~DtVp~ 77 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKD-GYYAVYGEI-GE--GKPKLLFMAHFDVVPV 77 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecC-CceEEEEEe-CC--CCCEEEEEeccccCCC
Confidence 4789999999999987322 26789999999999999998876653 557999987 43 2378999999999999
Q ss_pred CCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc--cc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VF 182 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~ 182 (444)
+++.|+++||++.++ ||++||||++|||++++++|.|++.|++.+ ++++|.|++++|||.|+. +...++++. ..
T Consensus 78 ~~~~w~~~Pf~~~~~-~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~-~~~~~~~~~~~~~ 153 (438)
T PRK08554 78 NPEEWNTEPFKLTVK-GDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGA-MAMHIAEKLREEG 153 (438)
T ss_pred CccccccCCceeEEE-CCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCcc-ccHHHHHHHHhcC
Confidence 866799999999998 999999999999999999999999997743 678999999999999863 444665532 11
Q ss_pred ccCceEEEeccCCCCcCCcceeeecccccEEEEEE--------------------Eeec-CCccCCCCCC---CHHHHHH
Q 013368 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIK--------------------ARGA-PGHGAKLYDN---SAMENLF 238 (444)
Q Consensus 183 ~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~--------------------v~G~-~~Hs~~p~~g---nai~~~~ 238 (444)
...|++++.+ |+....++.+++|. +++++ +.|. .+|++.+..+ +++..++
T Consensus 154 ~~~~~~iv~E-----pt~~~~~~~~~kg~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~ 227 (438)
T PRK08554 154 KLPKYMINAD-----GIGMKPIIRRRKGF-GVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAAS 227 (438)
T ss_pred CCCCEEEEeC-----CCCCcchhhcCCce-EEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHH
Confidence 2357888886 44321233333433 34444 4444 4999987665 4677777
Q ss_pred HHHHHHHhchhhhhHHHHhchh-c--cCCceeeeeeeeccCCCC---CC--------------------------Ccccc
Q 013368 239 KSIESVRRFRASQFDLVKAGLK-A--EGEVVSVNMAFLKAGTPS---PN--------------------------GFVMN 286 (444)
Q Consensus 239 ~~i~~l~~l~~~~~~~~~~~~~-~--~~~~~t~~~~~i~~G~~~---~~--------------------------~~~~n 286 (444)
+++..+..+.... .-+.. . .-...++++....+|.-. ++ ....|
T Consensus 228 ~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n 303 (438)
T PRK08554 228 HFLRESNVLAVSL----EGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPN 303 (438)
T ss_pred HHHhhcCceEEEE----eeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccc
Confidence 7666554321000 00000 0 001122333222222100 00 01445
Q ss_pred cc---cCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHh
Q 013368 287 LQ---PSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKA 363 (444)
Q Consensus 287 ~i---p~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~ 363 (444)
++ |++|++++|+|+.+ .+.+++.++|++.+....++++++++. ....|+. .++.++++++.+++++++.
T Consensus 304 ~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~lv~~~~~~~~~~ 375 (438)
T PRK08554 304 VYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFNLPEAEVEIRT------NEKAGYL-FTPPDEEIVKVALRVLKEL 375 (438)
T ss_pred eEEecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhccCCCceEEEEe------ccCCCCc-CCCCChHHHHHHHHHHHHh
Confidence 55 99999999999988 689999999998886434566666653 1222332 3567899999999999986
Q ss_pred cCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 364 NGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 364 ~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
+... .+...+|+||+++++..|+|++.|||+.. .+|++|||++++++.++.++|.+++..|+
T Consensus 376 g~~~-~~~~~~GgtDa~~~~~~Gip~v~~Gp~~~---~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 376 GEDA-EPVEGPGASDSRYFTPYGVKAIDFGPKGG---NIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred CCCc-EEEecCCchHHHHHHhcCCCceEECCCCC---CCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 6443 66677899999999999999999999864 59999999999999999999999998875
No 45
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-46 Score=382.70 Aligned_cols=371 Identities=20% Similarity=0.308 Sum_probs=276.2
Q ss_pred CChhHHHHHHHhhhcccCCCCCC---Ch----hHHHHHHHHHHHHCCCceEEEeecCCCCeE-E-EEecCCCCCCCcEEE
Q 013368 25 KSDDSIIERFRAYLQIDTSQPNP---DY----TNASKFILAQAEALSLESQTLEFAKNKPLI-L-LKWPGSNPQLPSILL 95 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~---~e----~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl-~-~~~~g~~~~~~~i~l 95 (444)
++.++.+++|++|++|||+|+.+ +| ..+++||.++|+++|++++.. .|+ + +.++|. +.|+|+|
T Consensus 43 ~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~------~~~v~~~~~~g~--~~~~l~l 114 (520)
T PRK06156 43 KYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV------DNRVLEIGLGGS--GSDKVGI 114 (520)
T ss_pred hhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec------CCeEEEEEecCC--CCCeEEE
Confidence 45678999999999999997421 22 356789999999999988532 244 4 666554 3479999
Q ss_pred EeecccccCCCCCCcc-----CCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCcc
Q 013368 96 NSHTDVVPSEPSKWSH-----HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH 170 (444)
Q Consensus 96 ~~H~Dtvp~~~~~W~~-----~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 170 (444)
.|||||||.+...|++ +||.+.++ ||++||||++|||+++++++.|++.|.+.+.+++++|.|+|++|||.|+
T Consensus 115 ~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~-~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~- 192 (520)
T PRK06156 115 LTHADVVPANPELWVLDGTRLDPFKVTLV-GDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDG- 192 (520)
T ss_pred EEecCccCCCCccCccCCccCCCCceEEE-CCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCc-
Confidence 9999999998778999 99999998 9999999999999999999999999998887788999999999999986
Q ss_pred ccHHHHHhccccccCceEEEeccCC----CCcC----------------------------------Ccc----------
Q 013368 171 DGAEKFADSHVFNSLNVGIVLDEGL----ASTT----------------------------------EDY---------- 202 (444)
Q Consensus 171 ~G~~~~~~~~~~~~~d~~~~~~~g~----~~p~----------------------------------~~~---------- 202 (444)
.|++.+++++.. .++.+++|... .+|+ ...
T Consensus 193 ~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~ 270 (520)
T PRK06156 193 DPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAA 270 (520)
T ss_pred hhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHH
Confidence 699999876432 24444444210 0111 000
Q ss_pred ----------eeeecccccE---------EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHh-chhhhh----HHHHh
Q 013368 203 ----------RAFYAERCPW---------WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRR-FRASQF----DLVKA 257 (444)
Q Consensus 203 ----------~i~~~~~G~~---------~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~-l~~~~~----~~~~~ 257 (444)
....+++|.. +++|+++|+++|+|.|+.| |||..+++++..|+. +..... +.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~ 350 (520)
T PRK06156 271 LAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYIND 350 (520)
T ss_pred HHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHH
Confidence 0012233544 8999999999999999998 999999999999875 211100 11110
Q ss_pred ch--------------hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--C
Q 013368 258 GL--------------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--S 321 (444)
Q Consensus 258 ~~--------------~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~ 321 (444)
.. .......+++++.+++|. ++|++++|+|++|.++.+++.++|++.+... .
T Consensus 351 ~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~ 418 (520)
T PRK06156 351 LVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAK 418 (520)
T ss_pred hhCCCCccCcCCccccCCCccCcEEeeeEEEEeC------------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 00 000012345565555542 5899999999999999999999999887642 2
Q ss_pred CCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCC-CC
Q 013368 322 RNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANT-PI 400 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~-~~ 400 (444)
.++++++.. ....|. ..+.++++++.+.+++++..+..+.+...+|+||++++. +++.|||+..+ ..
T Consensus 419 ~gv~ve~~~------~~~~p~--~~~~d~~lv~~l~~a~~~~~G~~~~~~~~~ggTDa~~~~----~~v~fGP~~~g~~~ 486 (520)
T PRK06156 419 HQVALDIDY------YWGEPM--VRDPKGPWLKTLLDVFGHFTGLDAKPVAIAGSTNAKLFP----NAVSFGPAMPGVKY 486 (520)
T ss_pred cCceEEEee------cCCCce--eeCCCCHHHHHHHHHHHHHhCCCCceeeecChhhhhhCC----ccEEEcCCCCCCCC
Confidence 455555542 122333 356689999999999999876554666778999999884 58999996321 23
Q ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 401 LLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 401 ~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
.+|++||+++++++.+++++|..++.++++.
T Consensus 487 ~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~~ 517 (520)
T PRK06156 487 TGHTENEFKTVEQFMLDLQMYTEMLIRIGNL 517 (520)
T ss_pred CCcCcccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 5899999999999999999999999999763
No 46
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=1.1e-46 Score=378.62 Aligned_cols=363 Identities=20% Similarity=0.198 Sum_probs=277.2
Q ss_pred hHHHHHHHhhhcccCCCCC--------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC-CCCCcEEEEee
Q 013368 28 DSIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN-PQLPSILLNSH 98 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~--------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~-~~~~~i~l~~H 98 (444)
+.+++.|++|++|||+|.. .++.++++||+++|+++|++...++ ..+|+++.++|+. ++.|+|+|+||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~---~~~~v~~~~~g~~~~~~~~i~l~~H 78 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD---ENGYVMATLPANVDKDVPTIGFIAH 78 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC---CCeEEEEEecCCCCCCCCeEEEEEe
Confidence 5688999999999999743 3478999999999999999743333 3458999997753 23589999999
Q ss_pred cccccCCC----------------------CCCccCCCcceec---CCCeEEecCc----ccchhHHHHHHHHHHHHHHc
Q 013368 99 TDVVPSEP----------------------SKWSHHPFGAHLD---SQGNIFARGS----QDMKCVGMQYLEAIRRLKAS 149 (444)
Q Consensus 99 ~Dtvp~~~----------------------~~W~~~Pf~~~~~---~~g~l~GrG~----~D~k~~~a~~l~a~~~l~~~ 149 (444)
|||||..+ +.|.++||.+.+. ..+.+||||+ +|||++++++|.|++.|++.
T Consensus 79 ~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~ 158 (408)
T PRK05469 79 MDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAH 158 (408)
T ss_pred ccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhC
Confidence 99998754 2344444444332 1368999998 99999999999999999887
Q ss_pred CCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCC-C
Q 013368 150 GFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAK-L 228 (444)
Q Consensus 150 ~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p 228 (444)
+..++++|.|+|+++||.| .|++.++.+. + ..+++++++.+ |.+ .+.++.+|..+++|+++|+++|++. |
T Consensus 159 ~~~~~g~v~~~f~~dEE~g--~Ga~~~~~~~-~-~~~~~~~~~~~---~~g--~~~~~~~g~~~~~i~v~Gk~~Ha~~~p 229 (408)
T PRK05469 159 PEIKHGDIRVAFTPDEEIG--RGADKFDVEK-F-GADFAYTVDGG---PLG--ELEYENFNAASAKITIHGVNVHPGTAK 229 (408)
T ss_pred CCCCCCCEEEEEecccccC--CCHHHhhhhh-c-CCcEEEEecCC---Ccc--eEEeccCceeEEEEEEeeecCCCCCCc
Confidence 6667899999999999986 4998886442 2 24667777642 433 4677789999999999999999875 7
Q ss_pred CCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHH
Q 013368 229 YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAE 307 (444)
Q Consensus 229 ~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~ 307 (444)
+.+ ||+..+++++..|+.+.... .......+++++.+++ .|++|++++|+|+.+.++.+
T Consensus 230 ~~g~nAi~~~~~~i~~l~~~~~~~--------~~~~~~~~i~~g~i~g------------gp~~~~i~~diR~~~~e~~e 289 (408)
T PRK05469 230 GKMVNALLLAADFHAMLPADETPE--------TTEGYEGFYHLTSIKG------------TVEEAELSYIIRDFDREGFE 289 (408)
T ss_pred ccccCHHHHHHHHHHhCCCCCCCC--------CCCCceEEEEEEEEEE------------ccceEEEEEEEecCCHHHHH
Confidence 888 99999999999887542110 0001112345555443 47999999999999999999
Q ss_pred HHHHHHHHHhccC--CC-CceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHh
Q 013368 308 SLERRIVEEWAPA--SR-NMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE 384 (444)
Q Consensus 308 ~i~~~i~~~~~~~--~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~ 384 (444)
.+.++|+++++.. .. +++++++.. ....+....+.+++++++.+++++++.+... ......|++|+++++.
T Consensus 290 ~i~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lv~~~~~a~~~~g~~~-~~~~~~ggtD~~~~~~ 363 (408)
T PRK05469 290 ARKALMQEIAKKVNAKYGEGRVELEIK-----DQYYNMREKIEPHPHIVDLAKQAMEDLGIEP-IIKPIRGGTDGSQLSF 363 (408)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEe-----ehhhhhhhhhcCCHHHHHHHHHHHHHcCCCc-EEecCCCcccHHHHhh
Confidence 9999999888742 12 455555421 1122222246778999999999999875443 3345679999999998
Q ss_pred cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 385 RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 385 ~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
.|+|++.|||+.. .+|++||+++++++.+++++|..++..++.+
T Consensus 364 ~giP~v~~gpG~~---~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 364 MGLPCPNIFTGGH---NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred CCCceEEECcCcc---cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999865 4999999999999999999999999888754
No 47
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1.9e-45 Score=370.06 Aligned_cols=365 Identities=17% Similarity=0.149 Sum_probs=284.3
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
..+++++++++|+++|+.| .+|.+++++|.++|+++|++++. .. +++|+++.+ |.++ .|+|+|+|||||||..
T Consensus 45 ~~~~~~~~r~~lh~~PE~s--~~E~~ta~~i~~~L~~~G~~~~~-~~--~~~~via~~-g~~~-g~~i~l~~h~DaVp~~ 117 (437)
T PLN02693 45 VFDWMVRIRRKIHENPELG--YEEFETSKLIRSELDLIGIKYRY-PV--AITGIIGYI-GTGE-PPFVALRADMDALPIQ 117 (437)
T ss_pred hHHHHHHHHHHHHhCCCCC--CchHHHHHHHHHHHHHCCCeeEe-cC--CCcEEEEEE-CCCC-CCEEEEEeecCCCcCC
Confidence 3466899999999999996 89999999999999999998763 21 467999998 4333 4899999999999997
Q ss_pred C-CCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 106 ~-~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
+ .+|+++||. +|++|||| +|+++|+++.|++.|++.+.+++++|.|+|+++||. + .|++.+++.+.+++
T Consensus 118 e~~~~~~~p~~-----~G~~hacG---hkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~-~-~Ga~~~i~~g~~~~ 187 (437)
T PLN02693 118 EAVEWEHKSKI-----PGKMHACG---HDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEG-L-SGAKKMREEGALKN 187 (437)
T ss_pred CCCCCCCCCCC-----CCCEECCc---chHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccc-h-hhHHHHHHCCCCCC
Confidence 6 679999984 89999766 699999999999999988766789999999999994 3 59999999887765
Q ss_pred CceEEEeccCCCCcCCcceeee----cccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhch
Q 013368 185 LNVGIVLDEGLASTTEDYRAFY----AERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGL 259 (444)
Q Consensus 185 ~d~~~~~~~g~~~p~~~~~i~~----~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~ 259 (444)
.|.++..+.....+.+ .+.. ..+|..+++|+++|+++|+|.|+.| |||..+++++.+|+.+....
T Consensus 188 ~~~iig~h~~p~~~~g--~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~-------- 257 (437)
T PLN02693 188 VEAIFGIHLSPRTPFG--KAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE-------- 257 (437)
T ss_pred CCEEEEEecCCCCCCe--eEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhccc--------
Confidence 5655544332111222 1222 2468889999999999999999999 99999999999998763211
Q ss_pred hccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc--CCCCceEEEeeccccccc
Q 013368 260 KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEFKQRASLHDK 337 (444)
Q Consensus 260 ~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~ 337 (444)
.......+++++.++||. ..|+||++|++++|+|+.+. .+.+.++|+++++. ..++++++++.. .
T Consensus 258 ~~~~~~~ti~vg~i~GG~------~~NvVPd~a~~~~diR~~~~--~~~i~~~i~~i~~~~a~~~g~~~e~~~~-----~ 324 (437)
T PLN02693 258 TDPLDSKVVTVSKVNGGN------AFNVIPDSITIGGTLRAFTG--FTQLQQRIKEIITKQAAVHRCNASVNLT-----P 324 (437)
T ss_pred CCCCCCcEEEEEEEEcCC------CCceECCeEEEEEEEecCCH--HHHHHHHHHHHHHHHHHHhCCcEEEEEe-----e
Confidence 011134689999999997 89999999999999999986 46788999888764 245666665531 1
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHhcCCCCC--ceeecCCcchHHHHhcCCCeE--EEccCCC--CCCCCCCCCccccH
Q 013368 338 FGRPILTATDSSNPWWNLLEEAVRKANGKLGK--PEIFPASTDARYFRERGLPAI--GFSPMAN--TPILLHDHNEFLNQ 411 (444)
Q Consensus 338 ~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~--~~~~~g~tD~~~~~~~gip~v--~~gp~~~--~~~~~H~~~E~i~~ 411 (444)
...|+++++.++.++++++.++++++.+.... .....|++|++++++ .+|.+ .+|++.. +....|+++|+++.
T Consensus 325 ~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~~gseDf~~~~~-~vP~~~~~lG~~~~~~~~~~~H~~~f~~de 403 (437)
T PLN02693 325 NGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPEMGSEDFSYFAE-TIPGHFSLLGMQDETNGYASSHSPLYRINE 403 (437)
T ss_pred cCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCCceechHHHHHH-HhhhhEEEEecCCCCCCCCCCCCCCcCCCH
Confidence 22444455777889999999999997554311 123458999999998 58976 6676621 11369999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcc
Q 013368 412 AEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 412 ~~l~~~~~~~~~~l~~l~~~ 431 (444)
+.+..++++|+.++..+.+.
T Consensus 404 ~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 404 DVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998654
No 48
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=4.1e-45 Score=373.58 Aligned_cols=352 Identities=18% Similarity=0.231 Sum_probs=267.0
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCcEEEEeecccccC
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVVPS 104 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~i~l~~H~Dtvp~ 104 (444)
.++++++|++|++|||+| ++|.++++||.++|+++|+++++++ ..|+++.++|.. ++.|+|+|.||+||||.
T Consensus 3 ~~~~~~~l~~l~~i~s~s--~~e~~~~~~l~~~l~~~G~~~~~~~----~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~ 76 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRPS--KNEKEVSNFIVNWAKKLGLEVKQDE----VGNVLIRKPATPGYENHPPIVLQGHMDMVCE 76 (477)
T ss_pred HHHHHHHHHHHHcCCCCC--ccHHHHHHHHHHHHHHcCCeEEEeC----CCeEEEEEcCCCCCCCCCeEEEEeeccccCC
Confidence 478999999999999875 7889999999999999999987653 359999987642 23588999999999999
Q ss_pred CC----CCCccCCCcceecCCCeEEecCcc---cchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHH
Q 013368 105 EP----SKWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (444)
Q Consensus 105 ~~----~~W~~~Pf~~~~~~~g~l~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (444)
++ ..|+.+||++.++ ||++||||++ |||++++++|++++. .+. .+++|.++|++|||.|+ .|++.+.
T Consensus 77 ~~~~~~~~w~~~p~~~~~~-~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~-~~~~i~~~~~~dEE~g~-~Gs~~l~ 150 (477)
T TIGR01893 77 KNEDSLHDFEKDPIELIID-GDWLKARGTTLGADNGIGVAMGLAILED---NNL-KHPPLELLFTVDEETGM-DGALGLD 150 (477)
T ss_pred CCCCCCCCCCCCCeEEEEe-CCEEEECCccccccccHHHHHHHHHHhc---CCC-CCCCEEEEEEeccccCc-hhhhhcC
Confidence 75 3799999999997 9999999995 999999999988764 332 46799999999999885 6999987
Q ss_pred hccccccCceEEEeccCCC------CcCCc-ce----eeec--ccccEEEEEEEee-cCCccCC-CCCC--CHHHHHHHH
Q 013368 178 DSHVFNSLNVGIVLDEGLA------STTED-YR----AFYA--ERCPWWLVIKARG-APGHGAK-LYDN--SAMENLFKS 240 (444)
Q Consensus 178 ~~~~~~~~d~~~~~~~g~~------~p~~~-~~----i~~~--~~G~~~~~i~v~G-~~~Hs~~-p~~g--nai~~~~~~ 240 (444)
... +. .++.++.|.... +|+.. .. +.+. ++|..+++|+++| +++|||. |+.+ ||+..++++
T Consensus 151 ~~~-~~-~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~ 228 (477)
T TIGR01893 151 ENW-LS-GKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARV 228 (477)
T ss_pred hhh-cC-CcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHH
Confidence 643 22 255555552110 12211 01 1111 5899999999999 9999986 7665 999999999
Q ss_pred HHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC
Q 013368 241 IESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA 320 (444)
Q Consensus 241 i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~ 320 (444)
+..|..+. +++++.+.||. ..|+||++|++++|+|..+....+.+.+.+.+.+...
T Consensus 229 i~~l~~~~------------------~~~v~~~~gg~------~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~ 284 (477)
T TIGR01893 229 LNELKENL------------------NFRLSDIKGGS------KRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSE 284 (477)
T ss_pred HHhhhhcC------------------CeEEEEEeCCC------cccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHH
Confidence 99887531 24566677765 7888888888888877665555555554444333211
Q ss_pred C-------------------------------------------------------------------------------
Q 013368 321 S------------------------------------------------------------------------------- 321 (444)
Q Consensus 321 ~------------------------------------------------------------------------------- 321 (444)
.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~ 364 (477)
T TIGR01893 285 YSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVES 364 (477)
T ss_pred hcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCch
Confidence 0
Q ss_pred ---------------CCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhc-
Q 013368 322 ---------------RNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER- 385 (444)
Q Consensus 322 ---------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~- 385 (444)
.++++++. ...|++ .++.++++++.+.+++++..+..+.+...+|++|+++|.+.
T Consensus 365 ~~~~i~~~i~~~~~~~~~~v~~~--------~~~~p~-~~~~d~plv~~l~~a~~~~~g~~~~~~~~~Ggtd~~~~~~~~ 435 (477)
T TIGR01893 365 DKDYVTEKIESIAKLAGARVEVS--------AGYPSW-QPDPQSNLLDTARKVYSEMFGEDPEVKVIHAGLECGIISSKI 435 (477)
T ss_pred hHHHHHHHHHHHhhhcCeEEEEe--------cCCCcc-cCCCCCHHHHHHHHHHHHHHCCCCeEEEeecCccHHHHHhhC
Confidence 12222222 233433 36789999999999999987765455677899999999875
Q ss_pred -CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013368 386 -GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 428 (444)
Q Consensus 386 -gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 428 (444)
++|++.|||+.. .+|++||+++++++.+++++|.+++..+
T Consensus 436 ~~i~~v~~Gp~~~---~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 436 PDIDMISIGPNIY---DPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCceEEEeCCCCC---CCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 788999999764 5999999999999999999999998654
No 49
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=5.2e-45 Score=368.21 Aligned_cols=360 Identities=19% Similarity=0.288 Sum_probs=263.6
Q ss_pred hHHHHHHHhhhcccCCCC----C------CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEec-CCCCCCCcEEEE
Q 013368 28 DSIIERFRAYLQIDTSQP----N------PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP-GSNPQLPSILLN 96 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~----~------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~-g~~~~~~~i~l~ 96 (444)
++.+++|++|++|||+|. . .++.++++|+.++|+++|++++.+. |+.+... +. +.|+|+|+
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~------~~~~~~~~~~--~~~~l~l~ 73 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVD------NYAGYAEYGQ--GEEYLGIL 73 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEec------CceEEEEeCC--CCCeEEEE
Confidence 468999999999999972 1 1246899999999999999887443 3333322 22 34789999
Q ss_pred eecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHH
Q 013368 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (444)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (444)
||+||||.++ .|+++||++.++ +|+|||||++||||++++++.|++.|++.+.+++++|.|+|+.|||.|+ .|+..+
T Consensus 74 gH~D~Vp~~~-~W~~~Pf~~~~~-~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-~g~~~~ 150 (447)
T TIGR01887 74 GHLDVVPAGD-GWTSPPFEAEIK-DGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGW-ACIDYY 150 (447)
T ss_pred eecCCCCCCC-CCcCCCCceEEE-CCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCc-HhHHHH
Confidence 9999999975 699999999998 9999999999999999999999999999888888999999999999986 699988
Q ss_pred Hhccccc----cCce---EEEeccC----------------------CCCcCCcc----eeeeccc--------------
Q 013368 177 ADSHVFN----SLNV---GIVLDEG----------------------LASTTEDY----RAFYAER-------------- 209 (444)
Q Consensus 177 ~~~~~~~----~~d~---~~~~~~g----------------------~~~p~~~~----~i~~~~~-------------- 209 (444)
++..... ..|. +++.+.| ..+|++.. .++++.+
T Consensus 151 l~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~ 230 (447)
T TIGR01887 151 FEHEEAPDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFI 230 (447)
T ss_pred HHhcCCCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhh
Confidence 8753211 0111 1211111 11343311 1345544
Q ss_pred -----ccE-----EEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHH--hchhhhhHHHHhch-----------hc---c
Q 013368 210 -----CPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVR--RFRASQFDLVKAGL-----------KA---E 262 (444)
Q Consensus 210 -----G~~-----~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~--~l~~~~~~~~~~~~-----------~~---~ 262 (444)
|.. +++|+++|+++|+|.|+.| |||..+++++..+. ++....++.+..-. .. .
T Consensus 231 ~~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 310 (447)
T TIGR01887 231 AKELEGSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDV 310 (447)
T ss_pred hcCcceEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCC
Confidence 777 7999999999999999999 99999999999886 32222222111100 00 0
Q ss_pred CCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCC
Q 013368 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPI 342 (444)
Q Consensus 263 ~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (444)
...+|+|++.|++| +|++|++++|+|+++.++.+++.+++.+.+. +. .+.... ....|.
T Consensus 311 ~~~~t~nvg~I~~g-----------~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~----~~-~~~~~~-----~~~~p~ 369 (447)
T TIGR01887 311 SGDLTMNVGVIDYE-----------NAEAGLIGLNVRYPVGNDPDTMLKNELAKES----GI-VEVTEN-----GYLKPL 369 (447)
T ss_pred cCCcEEEEEEEEEe-----------CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh----Cc-EEEEEc-----cCCCCe
Confidence 12467888888875 2889999999999999999988777765442 11 122210 123455
Q ss_pred ccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCC-CCCCCCCCCccccHHHHHHHHHHH
Q 013368 343 LTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMAN-TPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 343 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~-~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
+ .+.++++++.+.+++++..+..+.+...+|+||++++. +++.|||... ...++|++||+++++++..++++|
T Consensus 370 ~--~~~~~~lv~~l~~~~~~~~g~~~~~~~~~ggtda~~~~----~~i~~Gp~~pG~~~~aH~~dE~v~i~~l~~~~~i~ 443 (447)
T TIGR01887 370 Y--VPKDDPLVQTLMKVYEKQTGDEGTPVAIGGGTYARLME----NGVAFGALFPGEEDTMHQANEYIMIDDLLLATAIY 443 (447)
T ss_pred E--ECCCCHHHHHHHHHHHHHhCCCCCeeEecchhhhhhCC----CcEEeCCCCCCCCCCccCCCcceeHHHHHHHHHHH
Confidence 4 46689999999999999876554556678889988763 4688996421 123699999999999999999999
Q ss_pred HHHH
Q 013368 422 ESII 425 (444)
Q Consensus 422 ~~~l 425 (444)
..++
T Consensus 444 ~~~~ 447 (447)
T TIGR01887 444 AEAI 447 (447)
T ss_pred HHhC
Confidence 8864
No 50
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.9e-45 Score=369.31 Aligned_cols=355 Identities=15% Similarity=0.180 Sum_probs=271.5
Q ss_pred hHHHHHHHhhhcccCCCC--------CCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCCCCC-CCcEEEEe
Q 013368 28 DSIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQ-LPSILLNS 97 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~--------~~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~~~~-~~~i~l~~ 97 (444)
+++++.+.+|++|+|+|. +.++++.+++|+++|+++|++ ++. +. +..||+|.++|..+. .|.|+|.+
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~-d~--~~gnv~~~~~~~~~~~~~~i~~~a 79 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHY-DE--KNGYVIATIPSNTDKDVPTIGFLA 79 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEE-cC--CceEEEEEecCCCCCCCCEEEEEE
Confidence 688999999999999973 114458999999999999997 554 31 256999999876431 38999999
Q ss_pred ecccccCC-CC-------------------------CCccCCCcc------e-ecCCCeEEecCcccchhHHHHHHHHHH
Q 013368 98 HTDVVPSE-PS-------------------------KWSHHPFGA------H-LDSQGNIFARGSQDMKCVGMQYLEAIR 144 (444)
Q Consensus 98 H~Dtvp~~-~~-------------------------~W~~~Pf~~------~-~~~~g~l~GrG~~D~k~~~a~~l~a~~ 144 (444)
|||||+.. .. .|.++||+. . .+ ++.+|| +|||+++|++|.|++
T Consensus 80 HmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~-g~~l~G---~D~KgglAa~l~A~~ 155 (410)
T TIGR01882 80 HVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTD-GTTLLG---ADDKAGIAEIMTAAD 155 (410)
T ss_pred ecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcC-CCEeec---ccCHHHHHHHHHHHH
Confidence 99999842 12 689999995 2 43 779999 999999999999999
Q ss_pred HHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCc
Q 013368 145 RLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGH 224 (444)
Q Consensus 145 ~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~H 224 (444)
.|++.+..++++|.|+|+++||.|. |++.+..++ + ..+++++++. +|++ .+.+..+|..+++|+++|+++|
T Consensus 156 ~L~e~~~~~~g~I~~~ft~dEE~g~--Ga~~l~~~~-~-~~~~~~~i~g---ep~g--~i~~~~~g~~~~~I~v~Gk~aH 226 (410)
T TIGR01882 156 YLINHPEIKHGTIRVAFTPDEEIGR--GAHKFDVKD-F-NADFAYTVDG---GPLG--ELEYETFSAAAAKITIQGNNVH 226 (410)
T ss_pred HHHhCCCCCCCCEEEEEECcccCCc--Ccchhhhhh-c-CccEEEEeCC---CCCC--eEEEccccceEEEEEEEEEecC
Confidence 9988643458899999999999863 888876543 2 3567777773 4655 4666668999999999999999
Q ss_pred cCCC-CCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCC
Q 013368 225 GAKL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPP 302 (444)
Q Consensus 225 s~~p-~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~ 302 (444)
++.+ +.+ ||+..+.+++..|...... ..++-+.+.+++| ..|.+|++|++.+|+|+.+
T Consensus 227 a~~~~~~g~nAi~~a~~~~~~l~~~~~~-------------~~t~~~~g~i~~g-------~i~giPd~a~l~~diR~~~ 286 (410)
T TIGR01882 227 PGTAKGKMINAAQIAIDLHNLLPEDDRP-------------EYTEGREGFFHLL-------SIDGTVEEAKLHYIIRDFE 286 (410)
T ss_pred cccChHHHHHHHHHHHHHHHhcCCcCCC-------------ccccceeEEEEEE-------eEEEecCEEEEEEEEecCC
Confidence 9975 456 9999888876655432110 0011112334444 4566999999999999999
Q ss_pred CCCHHHHHHHHHHHhccC--CCC---ceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCc
Q 013368 303 TTDAESLERRIVEEWAPA--SRN---MTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPAST 377 (444)
Q Consensus 303 ~~~~~~i~~~i~~~~~~~--~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~t 377 (444)
.++.+.+.++|+++++.. ..+ +++++.. .+.+......+++++++.+.+++++.+..+ ......|+|
T Consensus 287 ~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~-------~~~~~~~~~~~~~~lv~~~~~a~~~~G~~~-~~~~~~ggt 358 (410)
T TIGR01882 287 KENFQERKELMKRIVEKMNNEYGQDRIKLDMND-------QYYNMAEKIEKVMEIVDIAKQAMENLGIEP-KISPIRGGT 358 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEe-------eecChhhccCCCHHHHHHHHHHHHHhCCCC-cccccceec
Confidence 999999999999888642 122 3343332 122211246678999999999999876554 444567899
Q ss_pred chHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 378 DARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 378 D~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
|+++|+..|+|++.||||.. ++|++|||++++++.+++++|..++...+
T Consensus 359 Da~~~~~~Gip~~~~G~G~~---~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 359 DGSQLSYMGLPTPNIFAGGE---NMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred hHHHHHhCCCCCCeEcCCcc---cCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999863 59999999999999999999999998765
No 51
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1.6e-43 Score=350.52 Aligned_cols=346 Identities=18% Similarity=0.216 Sum_probs=270.5
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCCCCCCc
Q 013368 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWS 110 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~ 110 (444)
++++++|++|||+| ++|.++++||.++|+++|++++... .+..|+++++.+..+ .|+|+|.||+||||.++ |+
T Consensus 2 ~~~~~~L~~ips~s--~~E~~~a~~l~~~l~~~g~~~~~~~--~~~~~vva~~~~~~~-~~~i~l~gH~DtVp~~~--~~ 74 (363)
T TIGR01891 2 TDIRRHLHEHPELS--FEEFKTSSLIAEALESLGIEVRRGV--GGATGVVATIGGGKP-GPVVALRADMDALPIQE--QT 74 (363)
T ss_pred hHHHHHHhcCCCCC--CchHHHHHHHHHHHHHcCCceEecC--CCCcEEEEEEeCCCC-CCEEEEEeccCCCCccc--cc
Confidence 57899999999996 7899999999999999999987522 245799999865433 38999999999999864 67
Q ss_pred cCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEE
Q 013368 111 HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIV 190 (444)
Q Consensus 111 ~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~ 190 (444)
.+||.+. + +|++||||+ ++++++++.|++.|++.+..++++|.|+|++|||.+ .|++++++++.+++.|++++
T Consensus 75 ~~pf~~~-~-~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~~~~~~~~~~~~d~~i~ 147 (363)
T TIGR01891 75 DLPYKST-N-PGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGG--GGATKMIEDGVLDDVDAILG 147 (363)
T ss_pred CCCcccC-C-CCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCc--chHHHHHHCCCCCCcCEEEE
Confidence 7999975 5 899999997 478899999999988876667899999999999985 59999998776666788888
Q ss_pred eccCCCCcCCc--ceeeecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCcee
Q 013368 191 LDEGLASTTED--YRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVS 267 (444)
Q Consensus 191 ~~~g~~~p~~~--~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t 267 (444)
++.....+.+. .....+++|..+++|+++|+++|++.|+.+ ||+..+++++++|+.+..... ......+
T Consensus 148 ~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~--------~~~~~~~ 219 (363)
T TIGR01891 148 LHPDPSIPAGTVGLRPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNV--------DPSRPAV 219 (363)
T ss_pred ECCCCCCCCeEEEECCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccC--------CCCCCcE
Confidence 86532223321 122345688999999999999999889888 999999999999987532110 0112467
Q ss_pred eeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccc
Q 013368 268 VNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTA 345 (444)
Q Consensus 268 ~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~ 345 (444)
++++.+++|. ..|+||++|++.+|+|+.+.++.+++.++|+++++.. ..+++++++. ....|.
T Consensus 220 ~~i~~i~gG~------~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~------~~~~p~--- 284 (363)
T TIGR01891 220 VTVGIIEAGG------APNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY------DRGLPA--- 284 (363)
T ss_pred EEEEEEEcCC------CCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE------ecCCCC---
Confidence 9999999987 8999999999999999999999999999999888642 2356677664 133443
Q ss_pred cCCCChHHHHHHHHHHHhcC-CC--CCceeecCCcchHHHHhcCCCe-EEEccCCCC----CCCCCCCCccccHHHH
Q 013368 346 TDSSNPWWNLLEEAVRKANG-KL--GKPEIFPASTDARYFRERGLPA-IGFSPMANT----PILLHDHNEFLNQAEY 414 (444)
Q Consensus 346 ~~~~~~l~~~~~~a~~~~~~-~~--~~~~~~~g~tD~~~~~~~gip~-v~~gp~~~~----~~~~H~~~E~i~~~~l 414 (444)
...++++++.++++++++.+ .. ..+..++|++|++++++. +|+ +.|.|.... +...|++++.++.+-+
T Consensus 285 ~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~Da~~~~~~-~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 285 VTNDPALTQILKEVARHVVGPENVAEDPEVTMGSEDFAYYSQK-VPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCCHHHHHHHHHHHHHhcCccceeccCCCCccccCHHHHHHh-CCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 33578999999999999754 22 123356799999999986 886 467676532 1368999988887654
No 52
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-43 Score=355.80 Aligned_cols=351 Identities=17% Similarity=0.219 Sum_probs=271.0
Q ss_pred CChhHHHHHHHhhhcccCCCC--------CCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEE
Q 013368 25 KSDDSIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~--------~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~ 96 (444)
.+.+++++++++|++|+|.++ +++|.++++||.++|+++|++++.. ...|++++++|.++..|+|+|.
T Consensus 7 ~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~----~~~n~~a~~~g~~~~~~~l~l~ 82 (412)
T PRK12893 7 INGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD----AIGNLFGRRAGTDPDAPPVLIG 82 (412)
T ss_pred cCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEeCCCCCCCCEEEEE
Confidence 356889999999999998642 3448899999999999999998753 3459999997754335889999
Q ss_pred eecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC----cccc
Q 013368 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDG 172 (444)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G 172 (444)
||+||||.+ |. .|+|++++++|.|++.|++.+..++++|.|+|++|||.| ++.|
T Consensus 83 ~H~DtVp~~----------------g~------~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G 140 (412)
T PRK12893 83 SHLDTQPTG----------------GR------FDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLG 140 (412)
T ss_pred ecccCCCCC----------------Cc------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEcccccccccccccc
Confidence 999999964 22 356789999999999999988888999999999999986 2468
Q ss_pred HHHHHhccccc------c-------------------------CceEEEec--cCCC---CcCCcceeeecccccEEEEE
Q 013368 173 AEKFADSHVFN------S-------------------------LNVGIVLD--EGLA---STTEDYRAFYAERCPWWLVI 216 (444)
Q Consensus 173 ~~~~~~~~~~~------~-------------------------~d~~~~~~--~g~~---~p~~~~~i~~~~~G~~~~~i 216 (444)
+.++......+ . .+.++.++ .|.. .+. ...++++++|..+++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i 219 (412)
T PRK12893 141 SGVFTGALPLDDALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEV 219 (412)
T ss_pred HHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEE
Confidence 88887542200 0 01111111 1100 111 3568899999999999
Q ss_pred EEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccC-CCCCCCcccccccCce
Q 013368 217 KARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSEA 292 (444)
Q Consensus 217 ~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G-~~~~~~~~~n~ip~~~ 292 (444)
+++|+++|+|. |+ .| |||..+++++..|+.+... ....++++++.+++| . ..|+||++|
T Consensus 220 ~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~-----------~~~~~~~~vg~i~ggg~------~~NvVP~~a 282 (412)
T PRK12893 220 TVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAAA-----------LAPDGVATVGRLRVEPN------SRNVIPGKV 282 (412)
T ss_pred EEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHHh-----------cCCCceEEEEEEEeeCC------CceEECCee
Confidence 99999999986 74 67 9999999999999875321 112357899999874 4 889999999
Q ss_pred EEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCc
Q 013368 293 EAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKP 370 (444)
Q Consensus 293 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~ 370 (444)
++++|+|+.|.++.+++.++|+++++.. .+++++++.. ....|+ ...++++++.+.+++++.+.+. .+
T Consensus 283 ~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~------~~~~~~---~~~d~~l~~~l~~~~~~~g~~~-~~ 352 (412)
T PRK12893 283 VFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVET------VWDFPP---VPFDPALVALVEAAAEALGLSH-MR 352 (412)
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE------EecCCC---cCCCHHHHHHHHHHHHHcCCCc-cc
Confidence 9999999999999999999999888642 2456666553 122332 3457899999999998865443 34
Q ss_pred eeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 371 EIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 371 ~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
...+|+||+++|+..+.+++.|||+... .+|++||+++++++.+++++|..++..++++
T Consensus 353 ~~~~g~tD~~~~~~~~p~~v~~gp~~~~--~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 353 MVSGAGHDAMFLARVAPAAMIFVPCRGG--ISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred cCCccHHHHHHHHhhCCEEEEEeecCCC--CCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 4567899999999875447899998654 6899999999999999999999999998654
No 53
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.8e-42 Score=351.55 Aligned_cols=346 Identities=16% Similarity=0.187 Sum_probs=262.4
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCC--CCCCcEEEEeeccccc
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVVP 103 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~--~~~~~i~l~~H~Dtvp 103 (444)
..+++++++++|++|||+| ++|.++++||.++++++|++++..+ ..|+++..++.. .+.|.|+|.|||||||
T Consensus 8 ~~~~~~~~l~~Lv~ips~S--~~e~~~~~~l~~~~~~~G~~~~~d~----~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~ 81 (485)
T PRK15026 8 SPQPLWDIFAKICSIPHPS--YHEEQLAEYIVGWAKEKGFHVERDQ----VGNILIRKPATAGMENRKPVVLQAHLDMVP 81 (485)
T ss_pred CHHHHHHHHHHHhCCCCCC--CCHHHHHHHHHHHHHhCCCEEEEEe----cCeEEEEEcCCCCCCCCCEEEEEeeecccC
Confidence 4678999999999999985 7888999999999999999987643 348999876431 2358899999999999
Q ss_pred CCC----CCCccCCCcceecCCCeEEecCc---ccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHH
Q 013368 104 SEP----SKWSHHPFGAHLDSQGNIFARGS---QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (444)
Q Consensus 104 ~~~----~~W~~~Pf~~~~~~~g~l~GrG~---~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (444)
+.+ .+|+.+||++.++ ||++||||+ +|||++++++|.++ .+.+. .+++|.++|++|||.|+ .|++.+
T Consensus 82 ~~~~~~~~~w~~~P~~~~i~-~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~-~ga~~l 155 (485)
T PRK15026 82 QKNNDTVHDFTKDPIQPYID-GEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGM-DGAFGL 155 (485)
T ss_pred CCCCCccccCCCCCceEEEc-CCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCc-HhHHHh
Confidence 975 2699999999997 999999999 59999999988776 34444 37899999999999985 799998
Q ss_pred HhccccccCceEEEeccCCCCcCCcceeeecc------------------cccEEEEEEEee-cCCccCC-CCCC--CHH
Q 013368 177 ADSHVFNSLNVGIVLDEGLASTTEDYRAFYAE------------------RCPWWLVIKARG-APGHGAK-LYDN--SAM 234 (444)
Q Consensus 177 ~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~------------------~G~~~~~i~v~G-~~~Hs~~-p~~g--nai 234 (444)
.. ..+ ..++++++|.. ....++.++ +|..+++|+++| +++|||. ++.| ||+
T Consensus 156 ~~-~~~-~~~~~i~~e~~-----~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi 228 (485)
T PRK15026 156 QS-NWL-QADILINTDSE-----EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNAN 228 (485)
T ss_pred hh-ccC-CcCEEEEeCCC-----CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHH
Confidence 65 233 35889999753 112343333 567889999999 9999995 7766 999
Q ss_pred HHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecC-------------
Q 013368 235 ENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVP------------- 301 (444)
Q Consensus 235 ~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~------------- 301 (444)
..+++++..+.. .++++++.++||. +.|+||.+|++.+++|..
T Consensus 229 ~~la~~l~~~~~------------------~~~~~v~~i~GG~------~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~ 284 (485)
T PRK15026 229 KLLVRFLAGHAE------------------ELDLRLIDFNGGT------LRNAIPREAFATIAVAADKVDALKSLVNTYQ 284 (485)
T ss_pred HHHHHHHHHhHh------------------hCCeEEEEEeCCC------ccCCCCCCcEEEEEEChhHHHHHHHHHHHHH
Confidence 999999988541 1345555555555 555555555555555544
Q ss_pred --------------------------------------------------------------------------------
Q 013368 302 -------------------------------------------------------------------------------- 301 (444)
Q Consensus 302 -------------------------------------------------------------------------------- 301 (444)
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~ 364 (485)
T PRK15026 285 EILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLI 364 (485)
T ss_pred HHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEe
Confidence
Q ss_pred ---CCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcc
Q 013368 302 ---PTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTD 378 (444)
Q Consensus 302 ---~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD 378 (444)
+..+.+++.++|+.+.+ ..+.++++. ..+|++ ..++++++++.+.++++++.+..+.+....+++|
T Consensus 365 Rs~~~~~~~~i~~~i~~~~~--~~g~~~~~~--------~~~p~w-~~~~ds~lv~~l~~~y~e~~G~~~~~~~ihaglE 433 (485)
T PRK15026 365 RSLIDSGKDYVVSMLDSLGK--LAGAKTEAK--------GAYPGW-QPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLE 433 (485)
T ss_pred cCCCchHHHHHHHHHHHHHH--HcCcEEEEe--------CCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEEeh
Confidence 33333333333333221 112222222 346665 4678999999999999999887656677889999
Q ss_pred hHHHHhc--CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013368 379 ARYFRER--GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 428 (444)
Q Consensus 379 ~~~~~~~--gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 428 (444)
++.|.+. ++|++.|||... .+|++||+++++++....+++..+|.++
T Consensus 434 cG~~~~~~p~i~~VsfGP~~~---~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 434 CGLFKKPYPEMDMVSIGPTIT---GPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred HHHHHhhCCCCCEEEECCCCC---CCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 9999864 899999999975 4999999999999988888888888877
No 54
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.9e-43 Score=353.72 Aligned_cols=348 Identities=17% Similarity=0.157 Sum_probs=270.0
Q ss_pred CChhHHHHHHHhhhcccC-------CCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEe
Q 013368 25 KSDDSIIERFRAYLQIDT-------SQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s-------~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~ 97 (444)
.+.+++++++.+|++|+| +|.+++|.++++||.++|+++|++++.. +++|++++++|.+++ |.|+|.|
T Consensus 7 ~~~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~----~~~nl~a~~~g~~~~-~~l~l~g 81 (412)
T PRK12892 7 IDGQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID----GIGNVFGRLPGPGPG-PALLVGS 81 (412)
T ss_pred ccHHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEecCCCCC-CeEEEEc
Confidence 346789999999999998 4445678899999999999999998753 456999999876554 8899999
Q ss_pred ecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC----ccccH
Q 013368 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGA 173 (444)
Q Consensus 98 H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~ 173 (444)
|+||||.+ |++|| |+|++++|.|++.|++.+..++++|.|++++|||.+ +..|+
T Consensus 82 H~DtVp~~----------------g~~dg------~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs 139 (412)
T PRK12892 82 HLDSQNLG----------------GRYDG------ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGS 139 (412)
T ss_pred cccCCCCC----------------Ccccc------hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccH
Confidence 99999974 34433 469999999999999998888999999999999984 45799
Q ss_pred HHHHhcccc----------cc-------------CceEEEe-------------ccCC-CCcCC-cceeeecccccEEEE
Q 013368 174 EKFADSHVF----------NS-------------LNVGIVL-------------DEGL-ASTTE-DYRAFYAERCPWWLV 215 (444)
Q Consensus 174 ~~~~~~~~~----------~~-------------~d~~~~~-------------~~g~-~~p~~-~~~i~~~~~G~~~~~ 215 (444)
+.++++... +. .|.+++. +.|. .+|++ ...++.+++|..+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~ 219 (412)
T PRK12892 140 RAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYR 219 (412)
T ss_pred HHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCCcEEEEEEeccceEEE
Confidence 998853110 00 0111111 1111 01211 246899999999999
Q ss_pred EEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccC-CCCCCCcccccccCc
Q 013368 216 IKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSE 291 (444)
Q Consensus 216 i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G-~~~~~~~~~n~ip~~ 291 (444)
|+++|+++|+|. |+ .+ ||+..+++++..|+.+... .. ..++++++.+++| . ..|+||++
T Consensus 220 i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~----------~~-~~~~~~vg~i~gg~~------~~NvIP~~ 282 (412)
T PRK12892 220 ITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPR----------VC-GPAVVTVGRVALDPG------SPSIIPGR 282 (412)
T ss_pred EEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh----------cC-CCcEEEEEEEEecCC------CCeEECCe
Confidence 999999999876 64 56 9999999999999864221 01 1268999999976 4 88999999
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCC
Q 013368 292 AEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGK 369 (444)
Q Consensus 292 ~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~ 369 (444)
|++++|+|+.|.++.+++.++|+++++.. .+++++++.. ....|+ ...++++++.+.+++++.+... .
T Consensus 283 a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~------~~~~~~---~~~d~~lv~~~~~a~~~~g~~~-~ 352 (412)
T PRK12892 283 VEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDR------IAEYAP---APCDAALVDALRAAAEAAGGPY-L 352 (412)
T ss_pred EEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE------EecCCC---cCCCHHHHHHHHHHHHHcCCCc-c
Confidence 99999999999999999999999888742 3456666553 122333 3457899999999999954443 3
Q ss_pred ceeecCCcchHHHHhcCCC-eEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 370 PEIFPASTDARYFRERGLP-AIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 370 ~~~~~g~tD~~~~~~~gip-~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
+...+|++|+++|++. +| ++.|||+... .+|++||+++++++.+++++|..++..++
T Consensus 353 ~~~~~g~tDa~~~~~~-ip~~~~~gp~~~~--~~H~~~E~v~i~~l~~~~~il~~~l~~~~ 410 (412)
T PRK12892 353 EMPSGAGHDAQNMARI-APSAMLFVPSKGG--ISHNPAEDTSPADLAQGARVLADTLRRLA 410 (412)
T ss_pred ccCcchHHHHHHHHhH-CCEEEEEeccCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4456789999999887 88 4679998654 68999999999999999999999998875
No 55
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.7e-42 Score=348.74 Aligned_cols=349 Identities=19% Similarity=0.237 Sum_probs=268.9
Q ss_pred CChhHHHHHHHhhhcc-cCC-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEE
Q 013368 25 KSDDSIIERFRAYLQI-DTS-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i-~s~-------s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~ 96 (444)
.+.+++++.+++|++| +.. |.+++|.++++||.++|+++|++++.. .++|++++++|.++..|.|+|.
T Consensus 4 ~~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~----~~~nl~a~~~g~~~~~~~l~l~ 79 (413)
T PRK09290 4 IDAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD----AVGNLFGRLEGRDPDAPAVLTG 79 (413)
T ss_pred cCHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEecCCCCCCCEEEEe
Confidence 4568899999999999 422 335678999999999999999998753 4569999997643334789999
Q ss_pred eecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC----cccc
Q 013368 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDG 172 (444)
Q Consensus 97 ~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G 172 (444)
||+||||++ |..|+|+++|+++.|++.|++.+.+++++|.|++++|||.| +..|
T Consensus 80 gH~DtVp~~----------------------g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G 137 (413)
T PRK09290 80 SHLDTVPNG----------------------GRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLG 137 (413)
T ss_pred cCccCCCCC----------------------CCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCcccc
Confidence 999999974 12478999999999999999988878899999999999984 3468
Q ss_pred HHHHHhcc-----------------------ccccCceEEEe---------------ccC-CCCcCC-cceeeecccccE
Q 013368 173 AEKFADSH-----------------------VFNSLNVGIVL---------------DEG-LASTTE-DYRAFYAERCPW 212 (444)
Q Consensus 173 ~~~~~~~~-----------------------~~~~~d~~~~~---------------~~g-~~~p~~-~~~i~~~~~G~~ 212 (444)
++.+++.. .++ .|++++. +.| ..+|+. ...++.+++|..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i~~~~kG~~ 216 (413)
T PRK09290 138 SRVFTGALTPEDALALRDADGVSFAEALAAIGYD-GDEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGVVTGIVGQR 216 (413)
T ss_pred HHHHHcccCHHHHHhccCCCCCCHHHHHHHcCCC-hhhccccccCCCCccEEEEEEeccCHHHHHCCCcEEEEeeeeccE
Confidence 88776431 011 2332221 000 002332 246889999999
Q ss_pred EEEEEEeecCCccC-CC-CCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccC-CCCCCCcccccc
Q 013368 213 WLVIKARGAPGHGA-KL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQ 288 (444)
Q Consensus 213 ~~~i~v~G~~~Hs~-~p-~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G-~~~~~~~~~n~i 288 (444)
+++|+++|+++|+| .| +.| |||..+++++..|+.+.... ....+++++.+++| . ..|+|
T Consensus 217 ~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~-----------~~~~~~~~g~i~~g~~------~~NvI 279 (413)
T PRK09290 217 RYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH-----------GPDLVATVGRLEVKPN------SVNVI 279 (413)
T ss_pred EEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEEcCC------CCeEE
Confidence 99999999999998 58 467 99999999999997653210 12357889998864 4 88999
Q ss_pred cCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCC
Q 013368 289 PSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGK 366 (444)
Q Consensus 289 p~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~ 366 (444)
|++|++++|+|+.|.++.+++.++|+++++.. ..++++++.. ....|+ ...++++++.+.+++++.+..
T Consensus 280 P~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~------~~~~~~---~~~d~~lv~~l~~a~~~~g~~ 350 (413)
T PRK09290 280 PGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIEL------ISRRPP---VPFDPGLVAALEEAAERLGLS 350 (413)
T ss_pred CCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE------EecCCC---ccCCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999888742 2356666553 123333 346789999999999887533
Q ss_pred CCCceeecCCcchHHHHhcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 367 LGKPEIFPASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 367 ~~~~~~~~g~tD~~~~~~~gip~-v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
. .+...+|++|+++|+. ++|+ +.|||+... .+|++||+++++++.+++++|+.++..+++
T Consensus 351 ~-~~~~~~g~tDa~~~~~-~iP~~~~~gp~~~~--~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 351 Y-RRLPSGAGHDAQILAA-VVPTAMIFVPSVGG--ISHNPAEFTSPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred c-cccCCccchHHHHHhc-cCCEEEEEeccCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 3 3445678999999964 6997 678887654 689999999999999999999999998864
No 56
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.6e-42 Score=347.18 Aligned_cols=350 Identities=17% Similarity=0.209 Sum_probs=268.2
Q ss_pred hhHHHHHHHhhhcccC-C-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEee
Q 013368 27 DDSIIERFRAYLQIDT-S-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s-~-------s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H 98 (444)
.+++++.+.+|-+|.+ + +.+++|.++++||.++|+++|++++.. ...|++++++|.+++.|.|+|.||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~----~~gNl~a~~~g~~~~~~~l~~~~H 84 (414)
T PRK12891 9 GERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD----AMGNLFARRAGRDPDAAPVMTGSH 84 (414)
T ss_pred HHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC----CCCCEEEEecCCCCCCCeEEEEec
Confidence 4588899999988843 2 235678999999999999999998864 345999999876555589999999
Q ss_pred cccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCc----cccHH
Q 013368 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----HDGAE 174 (444)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----~~G~~ 174 (444)
+||||.+ |..|||+|++++|+|++.|++.+.+++++|.|++++|||.++ +.|++
T Consensus 85 ~DtVp~g----------------------g~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~ 142 (414)
T PRK12891 85 ADSQPTG----------------------GRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSG 142 (414)
T ss_pred ccCCCCC----------------------ccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHH
Confidence 9999974 235999999999999999999998899999999999999752 34776
Q ss_pred HHH------------------------hccccc-------cCceEEE--eccCCC-CcCC-cceeeecccccEEEEEEEe
Q 013368 175 KFA------------------------DSHVFN-------SLNVGIV--LDEGLA-STTE-DYRAFYAERCPWWLVIKAR 219 (444)
Q Consensus 175 ~~~------------------------~~~~~~-------~~d~~~~--~~~g~~-~p~~-~~~i~~~~~G~~~~~i~v~ 219 (444)
.+. +.+... +.+..+. ++.|.. ++++ ...++.+++|..+++|+++
T Consensus 143 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~ 222 (414)
T PRK12891 143 VFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLT 222 (414)
T ss_pred HHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEE
Confidence 442 222110 0011122 221111 1111 3579999999999999999
Q ss_pred ecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEE
Q 013368 220 GAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGF 296 (444)
Q Consensus 220 G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~ 296 (444)
|+++|+|. |+ .+ |||..+++++..|+.+... .....+++++.|++|. ...|+||++|++.+
T Consensus 223 Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~-----------~~~~~t~~vg~I~gG~-----~~~NvVP~~~~~~~ 286 (414)
T PRK12891 223 GVDAHAGTTPMAFRRDALVGAARMIAFLDALGRR-----------DAPDARATVGMIDARP-----NSRNTVPGECFFTV 286 (414)
T ss_pred eECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh-----------cCCCeEEEEEEEEeeC-----CCcceECCeEEEEE
Confidence 99999984 76 46 9999999999999865321 0123589999999862 17899999999999
Q ss_pred EeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeec
Q 013368 297 DIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 374 (444)
Q Consensus 297 d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~ 374 (444)
|+|+.|.++.+++.++|+++++.. .+++++++.. ....|+ ...++++++.+.+++++.+.+. .....+
T Consensus 287 diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~d~~lv~~l~~a~~~~G~~~-~~~~~~ 356 (414)
T PRK12891 287 EFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ------IFGYAP---APFAPGCIDAVRDAARALGLSH-MDIVSG 356 (414)
T ss_pred EeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE------EecCCC---cCCCHHHHHHHHHHHHHcCCCc-eecCCc
Confidence 999999999999999999888632 3456666653 123333 3457899999999997765443 334567
Q ss_pred CCcchHHHHhcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHcc
Q 013368 375 ASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYASY 431 (444)
Q Consensus 375 g~tD~~~~~~~gip~-v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 431 (444)
|++|+.++. .|+|+ +.|||+... .+|++||+++++++..++++|..++..++..
T Consensus 357 ggtDa~~~~-~giPt~~~~gp~~~~--~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~ 411 (414)
T PRK12891 357 AGHDACFAA-RGAPTGMIFVPCVDG--LSHNEAEAITPEWFAAGADVLLRAVLQSAQE 411 (414)
T ss_pred chHHHHHHH-hhCCEEEEEEcCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhhh
Confidence 899988874 48997 779998764 6899999999999999999999999998653
No 57
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.6e-42 Score=345.19 Aligned_cols=348 Identities=16% Similarity=0.182 Sum_probs=267.9
Q ss_pred ChhHHHHHHHhhhcccCC-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEee
Q 013368 26 SDDSIIERFRAYLQIDTS-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSH 98 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~-------s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H 98 (444)
+.+++++.+.+|.+||-. |.+++|.++++||.++|+++|++++.. .+.|++++++|..++.|+|+|.||
T Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~----~~~nlia~~~g~~~~~~~l~~~~H 82 (414)
T PRK12890 7 NGERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD----AAGNLFGRLPGRDPDLPPLMTGSH 82 (414)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc----CCCcEEEEeCCCCCCCCEEEEeCc
Confidence 356888999999988821 224689999999999999999998864 345999999775444589999999
Q ss_pred cccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCc----cccHH
Q 013368 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----HDGAE 174 (444)
Q Consensus 99 ~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----~~G~~ 174 (444)
+||||.+ |..|||++++++|.|++.|.+.+..++++|.|++++|||.|+ +.|++
T Consensus 83 ~DtVp~~----------------------g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~ 140 (414)
T PRK12890 83 LDTVPNG----------------------GRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSR 140 (414)
T ss_pred ccCCCCC----------------------CCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHH
Confidence 9999974 346999999999999999998887789999999999999742 35776
Q ss_pred HHHhccc-----------------------cccCceEEE--ec-------------cCCC---CcCCcceeeecccccEE
Q 013368 175 KFADSHV-----------------------FNSLNVGIV--LD-------------EGLA---STTEDYRAFYAERCPWW 213 (444)
Q Consensus 175 ~~~~~~~-----------------------~~~~d~~~~--~~-------------~g~~---~p~~~~~i~~~~~G~~~ 213 (444)
.+..... + ..|.+.+ .+ .|.. .++ ...++.+++|..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~ 218 (414)
T PRK12890 141 ALAGTLDVEAVLATRDDDGTTLAEALRRIGG-DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRR 218 (414)
T ss_pred HHHcccChHHHHhccCCCCCCHHHHHHHcCC-ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEE
Confidence 6654211 0 0121111 11 0100 011 2568899999999
Q ss_pred EEEEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccC-CCCCCCccccccc
Q 013368 214 LVIKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQP 289 (444)
Q Consensus 214 ~~i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G-~~~~~~~~~n~ip 289 (444)
++|+++|+++|+|. |+ .+ |||..+++++.+|+.+.... ...++++++.+++| . ..|+||
T Consensus 219 ~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~-----------~~~~~~~~g~i~~gg~------~~NvIP 281 (414)
T PRK12890 219 QAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARAL-----------LHDLVATVGRLDVEPN------AINVVP 281 (414)
T ss_pred EEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEECCC------CceEEC
Confidence 99999999999986 75 55 99999999999998753211 02357889999874 4 899999
Q ss_pred CceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCC
Q 013368 290 SEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKL 367 (444)
Q Consensus 290 ~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~ 367 (444)
++|++++|+|+.|.++.+++.++|+++++.. ..+++++++. ....|+ ...++++++.+.+++++.+...
T Consensus 282 ~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~l~~~l~~~~~~~g~~~ 352 (414)
T PRK12890 282 GRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELER------LSRSEP---VPCDPALVDAVEAAAARLGYPS 352 (414)
T ss_pred CeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE------eecCCC---cCCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999998887642 2356666553 122333 3457899999999998865443
Q ss_pred CCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 368 GKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 368 ~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
.....+|+||+++|+..+++++.|||+... .+|++||+++++++.+++++|+.++..+++
T Consensus 353 -~~~~~~g~tDa~~~~~~gp~~~~~gp~~~~--~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 353 -RRMPSGAGHDAAAIARIGPSAMIFVPCRGG--ISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred -eecCCcccHHHHHHHhhCCEEEEEecCCCC--CCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 334467899999999988667789998654 699999999999999999999999998854
No 58
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=4.2e-41 Score=337.13 Aligned_cols=346 Identities=15% Similarity=0.176 Sum_probs=262.3
Q ss_pred HHHHHHHhhhcccC-C-------CCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecc
Q 013368 29 SIIERFRAYLQIDT-S-------QPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTD 100 (444)
Q Consensus 29 ~~~~~l~~l~~i~s-~-------s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~D 100 (444)
++++.+..+-++.+ + +.+++|.++++||+++|+++|++++.. ..+||+++++|.+++.|.|+|.||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G~~~~~~----~~~nl~a~~~g~~~~~~~l~~~~H~D 77 (401)
T TIGR01879 2 RLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAGLEVRFD----EVGNLIGRKEGTEPPLEVVLSGSHID 77 (401)
T ss_pred hHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCCCEEEEe----cCCcEEEEecCCCCCCCEEEEecccc
Confidence 34556666666522 1 235679999999999999999998754 34699999987654458999999999
Q ss_pred cccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC----ccccHHHH
Q 013368 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGAEKF 176 (444)
Q Consensus 101 tvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~~~~ 176 (444)
|||.+ |++ |++.|++++|++++.|++.+.+++++|.|+++++||.+ ++.|++.+
T Consensus 78 tV~~g----------------g~~------dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~ 135 (401)
T TIGR01879 78 TVVNG----------------GNF------DGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNM 135 (401)
T ss_pred cCCCC----------------Ccc------CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHH
Confidence 99974 333 33458999999999999999889999999999999973 35799888
Q ss_pred Hhccccc--------------------cCceEEEe---------------ccCCC-C-cCCcceeeecccccEEEEEEEe
Q 013368 177 ADSHVFN--------------------SLNVGIVL---------------DEGLA-S-TTEDYRAFYAERCPWWLVIKAR 219 (444)
Q Consensus 177 ~~~~~~~--------------------~~d~~~~~---------------~~g~~-~-p~~~~~i~~~~~G~~~~~i~v~ 219 (444)
+.....+ ..+..++. +.|.. + .+....++.+++|..+++|+++
T Consensus 136 ~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~ 215 (401)
T TIGR01879 136 VGLANPEDVRNICDAKGISFAEAMKACGPDLPNQPLRPRGDIKAYVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLN 215 (401)
T ss_pred hcccchhHHHhCcCCCCCCHHHHHHHcCCCcccccccccccccEEEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEE
Confidence 7532000 00111111 11110 0 1112578999999999999999
Q ss_pred ecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEE
Q 013368 220 GAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGF 296 (444)
Q Consensus 220 G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~ 296 (444)
|+++|+|. |+ .+ ||+..+++++..|+.+.... ....+.+++.+++|. ...|+||++|++.+
T Consensus 216 G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~-----------~~~~~~~vg~i~~g~-----~~~NvVP~~a~~~~ 279 (401)
T TIGR01879 216 GESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM-----------GDPTVGTVGKVEARP-----NGVNVIPGKVTFTL 279 (401)
T ss_pred EECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc-----------CCCeEEEEEEEEecC-----CceEEECCEEEEEE
Confidence 99999986 43 46 99999999999998754211 112467899988752 17899999999999
Q ss_pred EeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeec
Q 013368 297 DIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFP 374 (444)
Q Consensus 297 d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~ 374 (444)
|+|+.|.++.+++.++|++.++.. ..+++++++. ....|+ ...++++++.+.+++++.+.+. ....++
T Consensus 280 diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~d~~lv~~l~~a~~~~g~~~-~~~~~~ 349 (401)
T TIGR01879 280 DLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER------WMDEEP---VPCSEELVAALTELCERLGYNA-RVMVSG 349 (401)
T ss_pred EeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE------eecCCC---cCCCHHHHHHHHHHHHHcCCCc-cccccc
Confidence 999999999999999999888642 2456666653 122332 4568999999999999876544 334567
Q ss_pred CCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013368 375 ASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 428 (444)
Q Consensus 375 g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 428 (444)
|+||+++|+..++|++.|||+... .+|++||+++++++.+++++|..++..+
T Consensus 350 ggtDa~~~~~~~~~~v~fgPg~~~--~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 350 AGHDAQILAPIVPIGMIFIPSING--ISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred hHHHHHHHHhhCCEEEEEecCCCC--CcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 899999999988899999999764 6899999999999999999999998753
No 59
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=3.4e-40 Score=321.80 Aligned_cols=368 Identities=22% Similarity=0.241 Sum_probs=298.8
Q ss_pred CChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
...++++++.|+|+++|+.+ .+|.+++++|.++|+++|+++. +...+...+++.+.|.+++ |+|+|+++||.+|.
T Consensus 9 ~~~~~l~~~rr~lH~~PEL~--f~E~~Ta~~i~~~L~~~g~~~~--~~~~~~TGvva~~~~g~~g-~tIalRAD~DALPi 83 (392)
T COG1473 9 ELKDELIEWRRDLHEHPELG--FEEYRTAAYIAEKLEELGFEVV--EVGGGKTGVVATLKGGKPG-PTIALRADMDALPI 83 (392)
T ss_pred hhhHHHHHHHHHHhhCCccc--hhHHHHHHHHHHHHHHcCCeeE--eccCCceEEEEEEcCCCCC-CEEEEEeecccCcc
Confidence 56688999999999999996 7999999999999999999933 3222356899999866554 69999999999999
Q ss_pred CCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
.++ +.-||.++. .|++|+||+. ++++++|.+++.|++...+++++|+|+|+|+||.++ |++.|++++.+++
T Consensus 84 ~E~--t~~~~~S~~--~G~mHACGHD---~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~--Ga~~mi~~G~~~~ 154 (392)
T COG1473 84 QEE--TGLPFASKN--PGVMHACGHD---GHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG--GAKAMIEDGVFDD 154 (392)
T ss_pred ccc--cCCCcccCC--CCCcccCCch---HHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc--cHHHHHhcCCccc
Confidence 763 457998865 7899999975 789999999999999866799999999999999885 9999999998888
Q ss_pred -CceEEEeccCCCCcCCcceeeec--ccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchh
Q 013368 185 -LNVGIVLDEGLASTTEDYRAFYA--ERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (444)
Q Consensus 185 -~d~~~~~~~g~~~p~~~~~i~~~--~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~ 260 (444)
+|.++.++..+..|.+...+..| ..+...++++++|+++|++.|+.+ ||+.+++.++..|+.+.....+
T Consensus 155 ~vD~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~------- 227 (392)
T COG1473 155 FVDAVFGLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVD------- 227 (392)
T ss_pred cccEEEEecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccC-------
Confidence 89888888654325555555555 356788999999999999999999 9999999999999876543211
Q ss_pred ccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc--CCCCceEEEeecccccccC
Q 013368 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEFKQRASLHDKF 338 (444)
Q Consensus 261 ~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~ 338 (444)
+-....++++.+++|. +.|+||+.+++.+++|+.+.+..+.+.++|+++++. ...++++++... .
T Consensus 228 -p~~~~vv~vg~~~aG~------a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~------~ 294 (392)
T COG1473 228 -PLDSAVVTVGKIEAGT------AANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYE------R 294 (392)
T ss_pred -CccCeEEEEEEecCCC------cCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEec------C
Confidence 1123578999999998 889999999999999999999999999999988874 356777777742 2
Q ss_pred CCCCccccCCCChHHHHHHHHHHHhcCCC---CCce-eecCCcchHHHHhcCCCeEEEccCCCC----CCCCCCCCcccc
Q 013368 339 GRPILTATDSSNPWWNLLEEAVRKANGKL---GKPE-IFPASTDARYFRERGLPAIGFSPMANT----PILLHDHNEFLN 410 (444)
Q Consensus 339 ~~p~~~~~~~~~~l~~~~~~a~~~~~~~~---~~~~-~~~g~tD~~~~~~~gip~v~~gp~~~~----~~~~H~~~E~i~ 410 (444)
.. +.+.+|..+++.+++++++..+.. .... .+.|++|+++|.+. +|...|-.|... ....|++...++
T Consensus 295 ~~---p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsEDf~~~~~~-~Pg~~~~lG~~~~~~~~~~~H~p~~~~d 370 (392)
T COG1473 295 GY---PPVVNDPALTDLLAEAAEEVGGEEVVVVELPPSMAGSEDFGYYLEK-VPGAFFFLGTGSADGGTYPLHHPKFDFD 370 (392)
T ss_pred CC---CCccCCHHHHHHHHHHHHHhccccceecccCCCCCccchHHHHHHh-CCeeEEEeecCcCCCCcccccCCcCCCC
Confidence 23 347889999999999999998632 1222 23499999999998 886544344222 124899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 013368 411 QAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 411 ~~~l~~~~~~~~~~l~~l~~ 430 (444)
.+.+..+++++..+...+..
T Consensus 371 e~~l~~g~~~~~~~~~~~~~ 390 (392)
T COG1473 371 EAALATGVKLLAALALLYLA 390 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999988754
No 60
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=306.43 Aligned_cols=397 Identities=21% Similarity=0.323 Sum_probs=302.3
Q ss_pred HhcCCCCChhHHHHHHHhhhcccCCCCCC----ChhHHHHHHHHHHHHCCCceEEEeecC----------CCCeEEEEec
Q 013368 19 IFSSPAKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFAK----------NKPLILLKWP 84 (444)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~l~~i~s~s~~~----~e~~~~~~l~~~l~~~G~~~~~~~~~~----------~~~nl~~~~~ 84 (444)
.|..++.+.+++++.|+++++|+|+|..+ ...++++|++++|.++|-.++..+... ..|-+++++
T Consensus 7 ~fq~id~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~- 85 (473)
T KOG2276|consen 7 VFQSIDLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVL- 85 (473)
T ss_pred HHHHhhccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcc-
Confidence 55678899999999999999999998543 356889999999999997777655431 112344443
Q ss_pred CCCCCCCcEEEEeecccccCC-CCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeec
Q 013368 85 GSNPQLPSILLNSHTDVVPSE-PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (444)
Q Consensus 85 g~~~~~~~i~l~~H~Dtvp~~-~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (444)
|++|++++++++||+|++|.. +++|..+||+.+++ +|++||||+.|+||++++++.|++++++.++.++.||+++|..
T Consensus 86 Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~-~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~Eg 164 (473)
T KOG2276|consen 86 GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTED-DGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEG 164 (473)
T ss_pred cCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEE-CCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEe
Confidence 888889999999999999998 59999999999998 9999999999999999999999999999999999999999999
Q ss_pred CcccCccccHHHHHhcc---ccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEee--cCCccCCCCCC---CHHH
Q 013368 164 DEEIGGHDGAEKFADSH---VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARG--APGHGAKLYDN---SAME 235 (444)
Q Consensus 164 ~EE~g~~~G~~~~~~~~---~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G--~~~Hs~~p~~g---nai~ 235 (444)
-||.|+ .|...++++. .+..+|+.++.| ..+.-+..+-+.+|.||...|.++|.| +-.|||.. +| -|+.
T Consensus 165 mEEsgS-~~L~~l~~~~kD~~~~~vD~vciSd-nyWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvf-GG~~hE~m~ 241 (473)
T KOG2276|consen 165 MEESGS-EGLDELIEKEKDKFFKDVDFVCISD-NYWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVF-GGVVHEAMN 241 (473)
T ss_pred chhccC-ccHHHHHHHHhhhhhccCCEEEeeC-ceeccCCCcccccccccceeEEEEEeecccccccccc-cchhHHHHH
Confidence 999997 6888888753 456678655544 333333345678899999999999999 67899973 33 7888
Q ss_pred HHHHHHHHHHhchhh----------------h---hH-------HHHhc--------------hhccCCceeeeeeeecc
Q 013368 236 NLFKSIESVRRFRAS----------------Q---FD-------LVKAG--------------LKAEGEVVSVNMAFLKA 275 (444)
Q Consensus 236 ~~~~~i~~l~~l~~~----------------~---~~-------~~~~~--------------~~~~~~~~t~~~~~i~~ 275 (444)
.+..++..|.+...+ + ++ .+... +......+++.+..|.|
T Consensus 242 dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeG 321 (473)
T KOG2276|consen 242 DLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEG 321 (473)
T ss_pred HHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecccc
Confidence 888888887653211 1 00 00000 11224567888888887
Q ss_pred CCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc----CCCCceEEEeecccccccCCCCCccccCCCCh
Q 013368 276 GTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP----ASRNMTFEFKQRASLHDKFGRPILTATDSSNP 351 (444)
Q Consensus 276 G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 351 (444)
.- ++.++..+||.++.-.|.+|++|.++.+.+.+.+.+.++. ....=++++... ....|.. .+++++
T Consensus 322 aF--s~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~-----~~~~~Wv--~d~~~~ 392 (473)
T KOG2276|consen 322 AF--SGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMG-----HAGAPWV--SDPDDP 392 (473)
T ss_pred ee--eCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeec-----CCCCcee--cCCCch
Confidence 54 3445888999999999999999999999998888777652 111223333331 2455554 678999
Q ss_pred HHHHHHHHHHHhcCCCCCceeecCCc-chHHHHhc-CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 352 WWNLLEEAVRKANGKLGKPEIFPAST-DARYFRER-GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 352 l~~~~~~a~~~~~~~~~~~~~~~g~t-D~~~~~~~-gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
-+.++++|++.+.+-.+.....+|+- -..-|++. |-+++...-|.. ...+|+.||++++..+.+|.++++.++.+++
T Consensus 393 ~y~a~krA~~~v~gvePd~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~-dD~aHsqNEkl~i~N~~~G~k~l~ay~~el~ 471 (473)
T KOG2276|consen 393 HYLALKRAIETVYGVEPDFTREGGSIPVTLTFQDITGKSVLLLPYGAS-DDGAHSQNEKLNITNYVEGTKVLAAYISELA 471 (473)
T ss_pred hHHHHHHHHHHhhCCCCCccccCCccceehHHHHHhCCCeEEeccccc-ccchhhhcccccHHHHhhhHHHHHHHHHHHh
Confidence 99999999999987653333333332 34456665 788876644422 2479999999999999999999999999986
Q ss_pred c
Q 013368 430 S 430 (444)
Q Consensus 430 ~ 430 (444)
+
T Consensus 472 ~ 472 (473)
T KOG2276|consen 472 Q 472 (473)
T ss_pred c
Confidence 4
No 61
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1.5e-39 Score=325.39 Aligned_cols=347 Identities=14% Similarity=0.169 Sum_probs=266.8
Q ss_pred hHHHHHHHhhhcccC-CC-------CCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeec
Q 013368 28 DSIIERFRAYLQIDT-SQ-------PNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s-~s-------~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~ 99 (444)
.++++.+.+|-+|.+ .. .+..+.++.+|+++||+++|++++... ..|++++++|..++.|.|++.+||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~----~gN~~~~~~g~~~~~~~i~~gsHl 78 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDD----VGNLYGRLVGTEFPEETILTGSHI 78 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcC----CCcEEEEecCCCCCCCeEEEeccc
Confidence 467777778877732 21 245688999999999999999987543 349999999988778999999999
Q ss_pred ccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC----ccccHHH
Q 013368 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGAEK 175 (444)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~~~ 175 (444)
||||.+ |.-|.+.|+++.|++++.|++++..++++|.++++.+||.+ ++.|++.
T Consensus 79 Dtv~~g----------------------G~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~ 136 (406)
T TIGR03176 79 DTVVNG----------------------GNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKN 136 (406)
T ss_pred cCCCCC----------------------CccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHH
Confidence 999986 33456669999999999999998899999999999999965 2468887
Q ss_pred HHhcc------ccc--------------------------cCceE--EEeccCCCC--cCCcceeeecccccEEEEEEEe
Q 013368 176 FADSH------VFN--------------------------SLNVG--IVLDEGLAS--TTEDYRAFYAERCPWWLVIKAR 219 (444)
Q Consensus 176 ~~~~~------~~~--------------------------~~d~~--~~~~~g~~~--p~~~~~i~~~~~G~~~~~i~v~ 219 (444)
+...- .+. .++.. +-++.|+.. .....+++.+.+|..+++|+++
T Consensus 137 ~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~ 216 (406)
T TIGR03176 137 IFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLK 216 (406)
T ss_pred HhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEE
Confidence 76310 000 01111 222223321 2224688999999999999999
Q ss_pred ecCCccCCCC-C-C-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeecc-CCCCCCCcccccccCceEEE
Q 013368 220 GAPGHGAKLY-D-N-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKA-GTPSPNGFVMNLQPSEAEAG 295 (444)
Q Consensus 220 G~~~Hs~~p~-~-g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~-G~~~~~~~~~n~ip~~~~~~ 295 (444)
|+++|+|.|+ . + ||+.++++++..|..+... ....++++++.+++ |. ..|+||++|+++
T Consensus 217 GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~-----------~~~~~~~tvG~I~~gg~------~~NvIP~~a~~~ 279 (406)
T TIGR03176 217 GEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE-----------IGDPLVLTFGKVEPVPN------TVNVVPGETTFT 279 (406)
T ss_pred EECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh-----------cCCCcEEEEEEEEEcCC------ceEEECCeEEEE
Confidence 9999999854 3 3 9999999999998764321 11235789999985 44 899999999999
Q ss_pred EEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceee
Q 013368 296 FDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIF 373 (444)
Q Consensus 296 ~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~ 373 (444)
+|+|+.+.++.+.+.++|++.++.. ..++++++... ....| ...|+++++.+.+++++.++.. ....+
T Consensus 280 ~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~-----~~~~p----~~~d~~lv~~l~~a~~~~~~~~-~~~~s 349 (406)
T TIGR03176 280 IDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLW-----MDEAP----VPMNKEIVAIIEQLAKAEKLNY-RLMHS 349 (406)
T ss_pred EEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEE-----ecCCC----CCCCHHHHHHHHHHHHHcCCCc-eecCc
Confidence 9999999999999988888877642 34566666531 11222 3457899999999999987654 33456
Q ss_pred cCCcchHHHHhcCCCe-EEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 374 PASTDARYFRERGLPA-IGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 374 ~g~tD~~~~~~~gip~-v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
+|++|+++|++. +|+ +.|||+..+ .+|++||+++++++.+++++|..++..+++
T Consensus 350 ggg~Da~~~~~~-vP~~~ifgp~~~g--~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 350 GAGHDAQIFAPR-VPTAMIFVPSIGG--ISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred ccHHHHHHHHHH-CCEEEEEEeCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 689999999987 886 679998654 689999999999999999999999999876
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=4.2e-38 Score=327.53 Aligned_cols=356 Identities=16% Similarity=0.152 Sum_probs=267.9
Q ss_pred hcCCCCChhHHHHHHHhhhcccCCC-----------CCCChhHHHHHHHHHHHHCCC-ceEEEeecCCCCeEEEEecCCC
Q 013368 20 FSSPAKSDDSIIERFRAYLQIDTSQ-----------PNPDYTNASKFILAQAEALSL-ESQTLEFAKNKPLILLKWPGSN 87 (444)
Q Consensus 20 ~~~~~~~~~~~~~~l~~l~~i~s~s-----------~~~~e~~~~~~l~~~l~~~G~-~~~~~~~~~~~~nl~~~~~g~~ 87 (444)
+.......+++++.+.+|-+|+... .+..+.++++|+.+||+++|+ +++.. ...|++++++|.+
T Consensus 173 ~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D----~~GNl~~~~~g~~ 248 (591)
T PRK13590 173 FGAEPVLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID----AVGNVVGRYKGST 248 (591)
T ss_pred hCCCchHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC----CCCCEEEEecCCC
Confidence 4445566788999999999986522 134567999999999999999 76643 3459999999877
Q ss_pred CCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCccc
Q 013368 88 PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 88 ~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (444)
++.|.|++.+|+||||.+ |+ .|+++|++++|++++.|++.+..++++|.|+++++||.
T Consensus 249 ~~~~~v~~gsHlDTV~~g----------------G~------~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg 306 (591)
T PRK13590 249 PQAKRLLTGSHYDTVRNG----------------GK------YDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEG 306 (591)
T ss_pred CCCCeEEEecccccCCCC----------------CC------cccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCcc
Confidence 666899999999999864 33 47778999999999999999988889999999999996
Q ss_pred C----ccccHHHHH--------hc----cc----------c------------ccCceEEE--eccCCC--CcCCcceee
Q 013368 168 G----GHDGAEKFA--------DS----HV----------F------------NSLNVGIV--LDEGLA--STTEDYRAF 205 (444)
Q Consensus 168 g----~~~G~~~~~--------~~----~~----------~------------~~~d~~~~--~~~g~~--~p~~~~~i~ 205 (444)
+ ++.|++.+. +. +. + ..+..++- ++.|+. ......+++
T Consensus 307 ~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV 386 (591)
T PRK13590 307 QRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIV 386 (591)
T ss_pred ccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEE
Confidence 3 246777532 10 00 0 00011111 222211 001135799
Q ss_pred ecccccEEEEEEEeecCCccCC-CCC-C-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeecc-CCCCCC
Q 013368 206 YAERCPWWLVIKARGAPGHGAK-LYD-N-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKA-GTPSPN 281 (444)
Q Consensus 206 ~~~~G~~~~~i~v~G~~~Hs~~-p~~-g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~-G~~~~~ 281 (444)
.+.+|..+++|+++|+++|+|. |.. + ||+..+++++..++.+... ...++++++.+.. |.
T Consensus 387 ~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~------------~~~~v~tVG~i~~~Gg---- 450 (591)
T PRK13590 387 TSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ------------DGDSVGTVGMLEVPGG---- 450 (591)
T ss_pred eeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc------------CCCcEEEEEEEEECCC----
Confidence 9999999999999999999997 543 4 9999999999998764210 1123567777763 32
Q ss_pred CcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHH
Q 013368 282 GFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEA 359 (444)
Q Consensus 282 ~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a 359 (444)
..|+||++|++++|+|+.+.++.+.+.++|++.++.. ..+++++++.. ...| ++..++++++.+.++
T Consensus 451 --~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~~------~~~~---~~~~d~~lv~~~~~a 519 (591)
T PRK13590 451 --SINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEET------MRAA---AAPSAPAWQQRWEAA 519 (591)
T ss_pred --CCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEe------ecCC---CcCCCHHHHHHHHHH
Confidence 7899999999999999999999999988888777642 35667776641 2222 356688999999999
Q ss_pred HHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 360 VRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 360 ~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
+++.+... ....++|++|+++|+..+++++.|||+... ..+|+++|+++++++.+++++|..++..++.
T Consensus 520 a~~~G~~~-~~~~sggg~Da~~~a~~~p~~mifgpg~~~-g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~ 588 (591)
T PRK13590 520 VAALGLPL-FRMPSGAGHDAMKLHEIMPQAMLFVRGENA-GISHNPLESSTADDMQLAVQAFQHLLDQLAA 588 (591)
T ss_pred HHHcCCCc-ccCCcchhHHHHHHHHHCCEEEEEEeeCCC-CCCCCCccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 98876554 334567899999999987778999998531 2689999999999999999999999988853
No 63
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=6.3e-37 Score=318.40 Aligned_cols=359 Identities=13% Similarity=0.094 Sum_probs=269.5
Q ss_pred HhcCCCCChhHHHHHHHhhhcccCC---C--------CCCChhHHHHHHHHHHHHCCCc-eEEEeecCCCCeEEEEecCC
Q 013368 19 IFSSPAKSDDSIIERFRAYLQIDTS---Q--------PNPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGS 86 (444)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~l~~i~s~---s--------~~~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nl~~~~~g~ 86 (444)
.....+...+++++.+.+|.+|+.+ . .+..+.++.+|+.+||+++|++ ++.++ ..||+++++|.
T Consensus 172 l~~~~~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~----~gNv~~~~~g~ 247 (591)
T PRK13799 172 KFGYTPAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA----VGNVVGRYKAA 247 (591)
T ss_pred HhCCChhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC----CCCEEEEcCCC
Confidence 3445666778999999999999631 1 1334678999999999999998 87543 35999999887
Q ss_pred CCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcc
Q 013368 87 NPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE 166 (444)
Q Consensus 87 ~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 166 (444)
+++.|.|++.+|+||||. +|+++|+ .|+++.|++++.|++.+.+++++|.|+++.+||
T Consensus 248 ~~~~p~v~~gSHlDTV~~----------------gG~~DG~------~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EE 305 (591)
T PRK13799 248 DDDAKTLITGSHYDTVRN----------------GGKYDGR------EGIFLAIACVKELHEQGERLPFHFEVIAFAEEE 305 (591)
T ss_pred CCCCCeEEEeccccccCC----------------CCccccH------HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCC
Confidence 666799999999999985 6666665 599999999999999999999999999999999
Q ss_pred cC----ccccHHHHHh------------ccc-----cccCce-----------------E--EEeccCCC--CcCCccee
Q 013368 167 IG----GHDGAEKFAD------------SHV-----FNSLNV-----------------G--IVLDEGLA--STTEDYRA 204 (444)
Q Consensus 167 ~g----~~~G~~~~~~------------~~~-----~~~~d~-----------------~--~~~~~g~~--~p~~~~~i 204 (444)
.. ++.|++.+.- ++. ++..++ . +-++.|+. ......++
T Consensus 306 g~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igv 385 (591)
T PRK13799 306 GQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGI 385 (591)
T ss_pred ccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEE
Confidence 62 3568888761 111 000010 0 11111111 00123579
Q ss_pred eecccccEEEEEEEeecCCccCC-CC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCC
Q 013368 205 FYAERCPWWLVIKARGAPGHGAK-LY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPN 281 (444)
Q Consensus 205 ~~~~~G~~~~~i~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~ 281 (444)
+.+.+|..+++|+++|+++|+|. |. .+ ||+.++++++..++.+... ......+++++.++++.
T Consensus 386 V~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~----------~~~~~~v~tVG~I~~~~---- 451 (591)
T PRK13799 386 VTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQ----------DQHASLVATMGQLNVPS---- 451 (591)
T ss_pred EeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHh----------cCCCCcEEEEEEEEecC----
Confidence 99999999999999999999997 43 35 9999999999999764221 01122467788887542
Q ss_pred CcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccC--CCCceEEEeecccccccCCCCCccccCCCChHHHHHHHH
Q 013368 282 GFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPA--SRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEA 359 (444)
Q Consensus 282 ~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a 359 (444)
+..|+||++|++++|+|+.+.++.+.+.++|++.++.. ..+++++++. ....| ++..++++++.+.++
T Consensus 452 -ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~------~~~~~---~~~~d~~lv~~~~~a 521 (591)
T PRK13799 452 -GSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAEL------AMKAA---AAPCAPELMKQLEAA 521 (591)
T ss_pred -CCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE------EecCC---CcCCCHHHHHHHHHH
Confidence 17899999999999999999999999888877766532 2455665553 12222 256678999999999
Q ss_pred HHHhcCCCCCceeecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHH
Q 013368 360 VRKANGKLGKPEIFPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYA 429 (444)
Q Consensus 360 ~~~~~~~~~~~~~~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 429 (444)
.++.+... ....+++++|+++|++.+++++.|+|+... ..+|+++|+++++++.+++++|..++..++
T Consensus 522 ~~~~G~~~-~~~~sgag~Da~~~a~~~p~amif~~~g~~-g~sHsp~E~v~~edL~~g~~vl~~~l~~l~ 589 (591)
T PRK13799 522 TDAAGVPL-FELASGAGHDAMKIAEIMDQAMLFTRCGNA-GISHNPLESMTADDMELSADAFLDFLNNFA 589 (591)
T ss_pred HHHcCCCc-eecCcchHHHHHHHHhhCCEEEEEEecCCC-CCCCCccccCCHHHHHHHHHHHHHHHHHHh
Confidence 88766544 334557899999999998889999886431 158999999999999999999999998875
No 64
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.95 E-value=5e-27 Score=210.91 Aligned_cols=183 Identities=31% Similarity=0.533 Sum_probs=150.7
Q ss_pred EEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccH
Q 013368 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (444)
Q Consensus 94 ~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (444)
+|++||||||. .+.|+++||++..+ +|++||||++|+|+++++++.|++.|++.+.+++++|.|+|+++||.|+..|+
T Consensus 1 ll~~H~Dtv~~-~~~w~~~pf~~~~~-~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVPG-PEGWKHDPFELSIE-DGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCST-GGGSSSSTTSEEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccCC-cCcCCCCCcccEEE-CCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 68999999994 78999999999998 99999999999999999999999999988889999999999999999974499
Q ss_pred HHHHhcc--ccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhh
Q 013368 174 EKFADSH--VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQ 251 (444)
Q Consensus 174 ~~~~~~~--~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~ 251 (444)
+.+++++ .....|+.++.+ |+......
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e-----~~~~~~~~---------------------------------------------- 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGE-----PTGKGGVG---------------------------------------------- 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECE-----CETTSEEE----------------------------------------------
T ss_pred hhhhhhccccccccccccccc-----cccccccc----------------------------------------------
Confidence 9999873 112245555443 32211111
Q ss_pred hHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeec
Q 013368 252 FDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQR 331 (444)
Q Consensus 252 ~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 331 (444)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHH---hcCCCeEEEccCCCCCCCCCCCCcc
Q 013368 332 ASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFR---ERGLPAIGFSPMANTPILLHDHNEF 408 (444)
Q Consensus 332 ~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~---~~gip~v~~gp~~~~~~~~H~~~E~ 408 (444)
...+.++++.+.+++++.++....+...+|++|++++. ..++|++.|||+.. .+|++||+
T Consensus 108 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~~---~~H~~~E~ 170 (189)
T PF01546_consen 108 --------------SDNDPPLVQALQAAAQEVGGEPPEPVASGGGTDAGFLAEVKGLGIPAIGFGPGGS---NAHTPDEY 170 (189)
T ss_dssp --------------HCTCHHHHHHHHHHHHHTTSSEEEEEEESSSSTHHHHHCHHHTTEEEEEEESCEE---STTSTT-E
T ss_pred --------------ccccHHHHHHHHHHHHHHhhccccccceeccccchhhhhhhccccceeeeCCCCC---CCCCCCcE
Confidence 13356799999999999987333667888999999999 56999999999983 69999999
Q ss_pred ccHHHHHHHHHHHHHHHH
Q 013368 409 LNQAEYLKGIDIYESIIK 426 (444)
Q Consensus 409 i~~~~l~~~~~~~~~~l~ 426 (444)
++++++.+++++|++++.
T Consensus 171 i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 171 IDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp EEHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHHHh
Confidence 999999999999999986
No 65
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=1.6e-24 Score=211.72 Aligned_cols=364 Identities=19% Similarity=0.161 Sum_probs=267.2
Q ss_pred ChhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceE-EEeec----CCC--Ce-EEEEecCCCCCCCcEEEEe
Q 013368 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ-TLEFA----KNK--PL-ILLKWPGSNPQLPSILLNS 97 (444)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~-~~~~~----~~~--~n-l~~~~~g~~~~~~~i~l~~ 97 (444)
..+++++.+.++++||+.| .++.+++.++.+|++.+|+.++ ..... ... .| +.+++++..+--|.+-+.+
T Consensus 3 ~~~~l~~~F~~~~kI~~~S--~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~s 80 (414)
T COG2195 3 KMERLLDRFLELVKIPTQS--KHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFIS 80 (414)
T ss_pred chHHHHHHHHHHeeCCCCC--CCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccc
Confidence 4678999999999999996 7888999999999999999883 11111 011 22 5566777654457899999
Q ss_pred ecccccCC-----CCCC---------------------ccCCCcceecCCCeEEecCc----ccchhHHHHHHHHHHHHH
Q 013368 98 HTDVVPSE-----PSKW---------------------SHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLK 147 (444)
Q Consensus 98 H~Dtvp~~-----~~~W---------------------~~~Pf~~~~~~~g~l~GrG~----~D~k~~~a~~l~a~~~l~ 147 (444)
|+||+|-. ...| .+.|......-+..+.-.|+ +|+|+|++.++.++..+.
T Consensus 81 h~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~ 160 (414)
T COG2195 81 HHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLR 160 (414)
T ss_pred cccccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHh
Confidence 99999631 1223 13444333220123334455 799999999999999999
Q ss_pred HcC-CCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccC
Q 013368 148 ASG-FQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA 226 (444)
Q Consensus 148 ~~~-~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~ 226 (444)
+.. .-+.++|.+.|+++||.|+ +|+..+.-. ++. +++++.+|+| + .+.+.+...+...+++++.|+.+|++
T Consensus 161 ~~~~~i~h~~i~~g~s~~Ee~g~-rg~~~~~~a-~f~-a~~ay~iDGg---~--~g~i~~ea~~~~~~~~~~~g~~~h~~ 232 (414)
T COG2195 161 EKHPEIPHGGIRGGFSPDEEIGG-RGAANKDVA-RFL-ADFAYTLDGG---P--VGEIPREAFNAAAVRATIVGPNVHPG 232 (414)
T ss_pred hcCccccccCeEEEecchHHhhh-hhhhhccHH-hhh-cceeEecCCC---c--cCeeeeeccchheeeeeeeccCcCcc
Confidence 662 3467999999999999986 788876654 343 5889999943 2 24788899999999999999999998
Q ss_pred CCC-CC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccccccCceEEEEEeecCCCC
Q 013368 227 KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTT 304 (444)
Q Consensus 227 ~p~-~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~ 304 (444)
... .. ||+..+.++...+..-.. ...++...+..+.++ ..|.|.+.+.....+|...+.
T Consensus 233 ~a~~~~i~a~~~a~e~~~~~~~~~~-------------~e~t~~~~Gv~~~~~------~~~~V~~~s~~~~~iR~~d~~ 293 (414)
T COG2195 233 SAKGKMINALLLAAEFILELPLEEV-------------PELTEGPEGVYHLGD------STNSVEETSLNLAIIRDFDNL 293 (414)
T ss_pred chHHHHhhHHHhhhhhhhcCCcccc-------------cccccccceEEeccc------cccchhhhhhhhhhhhhcchh
Confidence 743 23 777766655554432110 123556677777776 888999999999999999987
Q ss_pred CHHHHHHHHHHHhcc----CCCCceEEEeecccccccCCCCCccccCCCChHHHHHHHHHHHhcCCCCCceeecCCcchH
Q 013368 305 DAESLERRIVEEWAP----ASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEEAVRKANGKLGKPEIFPASTDAR 380 (444)
Q Consensus 305 ~~~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~ 380 (444)
..+.....+++.+.. ......++++. ...+|.+ ...+++.+++.+++++++++.++ ......||+|++
T Consensus 294 ~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~Yp~~-~~~~~~~iv~~a~~a~~~l~~~p-~v~~i~gGtd~~ 365 (414)
T COG2195 294 LFRARKDSMKDVVEEMAASLGKLAGAELEV------KDSYPGW-KIKPDSPLVDLAKKAYKELGIKP-KVKPIHGGTDGG 365 (414)
T ss_pred HHHHhHHHHHHHHHHHHHHhhhccceEEEE------eccccCc-CCCCCchHHHHHHHHHHHhCCCc-eEEEeecccchh
Confidence 777777777766652 12123444443 1456665 47788999999999999999984 777888999999
Q ss_pred HHHhcCCCeE--EEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHc
Q 013368 381 YFRERGLPAI--GFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAYAS 430 (444)
Q Consensus 381 ~~~~~gip~v--~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 430 (444)
.++..|+|+. ..|| .. +.|+++|+++++++.+.++++..++..+..
T Consensus 366 ~is~~g~p~~~i~~Gp-~~---n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~~ 413 (414)
T COG2195 366 VLSFKGLPTPNISTGP-GE---NPHSPDEFVSIESMEKAVQVLVELLKLAAA 413 (414)
T ss_pred hhhccCCCCceEeccc-cc---CCCCccceeehHHHHHHHHHHHHHHHHhhc
Confidence 9999988865 5566 44 599999999999999999999999887653
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.87 E-value=7.7e-21 Score=180.10 Aligned_cols=274 Identities=17% Similarity=0.155 Sum_probs=191.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCC-c-----eEEE--eecC-CCCeEEEEecCCCCCCCcEEEEe
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSL-E-----SQTL--EFAK-NKPLILLKWPGSNPQLPSILLNS 97 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~-~-----~~~~--~~~~-~~~nl~~~~~g~~~~~~~i~l~~ 97 (444)
.+++.++..+|++.||++++.+|...+++|...|+++.. + +..+ +++. ++.||+|-++|. .++++|++.|
T Consensus 7 ~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~-~~k~tvvl~g 85 (553)
T COG4187 7 SERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGG-TSKRTVVLHG 85 (553)
T ss_pred HHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecC-CCCceEEEee
Confidence 689999999999999999999999999999998887742 1 1111 2111 678999999984 3568999999
Q ss_pred ecccccCCC-CCCccCCCcc-----------e---------ecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcce
Q 013368 98 HTDVVPSEP-SKWSHHPFGA-----------H---------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRS 156 (444)
Q Consensus 98 H~Dtvp~~~-~~W~~~Pf~~-----------~---------~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 156 (444)
|+|||..++ ....+-.|.+ . .++|+|++|||+.|||+|+|+.|++++.+.+++ ...||
T Consensus 86 H~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~-~~~GN 164 (553)
T COG4187 86 HFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART-DRQGN 164 (553)
T ss_pred ccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC-CCCCc
Confidence 999999974 2222223332 0 115899999999999999999999999999874 68999
Q ss_pred EEEEeecCcccCccccHHHHHhcc-cc-c--cCce--EEEeccCCC-CcCC-cceeeecccccEEEEEEEeecCCccCCC
Q 013368 157 VYLSFVPDEEIGGHDGAEKFADSH-VF-N--SLNV--GIVLDEGLA-STTE-DYRAFYAERCPWWLVIKARGAPGHGAKL 228 (444)
Q Consensus 157 i~~~~~~~EE~g~~~G~~~~~~~~-~~-~--~~d~--~~~~~~g~~-~p~~-~~~i~~~~~G~~~~~i~v~G~~~Hs~~p 228 (444)
|.|+.+||||..+ .|++..+... .+ + ..++ +|..|.-.. .++. .-.++.|..|.+-.-.-|.|...|.|.|
T Consensus 165 lLf~a~pdEE~~s-~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~ 243 (553)
T COG4187 165 LLFMAVPDEEVES-RGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYP 243 (553)
T ss_pred EEEEeccchhhhc-ccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCc
Confidence 9999999999986 7988877531 11 1 1222 344432111 1111 2368889999999999999999999999
Q ss_pred CCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcccc-cccCceEEEEEeecCCCCCH
Q 013368 229 YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMN-LQPSEAEAGFDIRVPPTTDA 306 (444)
Q Consensus 229 ~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~~n-~ip~~~~~~~d~R~~~~~~~ 306 (444)
..| ||-..+.+++.+|+ ++.+..+... +...+ +.+.+...+++- ..| ..|.++.+.|++=+.. .+.
T Consensus 244 f~Gvnan~maSei~~~le-~N~~l~dr~~-Ge~t~-PPs~L~qkDlKe--------~Y~VqTp~~a~~~fN~l~h~-~ta 311 (553)
T COG4187 244 FEGVNANFMASEITRRLE-LNADLADRVD-GEITP-PPSCLEQKDLKE--------SYNVQTPERAWLYFNWLYHS-RTA 311 (553)
T ss_pred ccCCCHHHHHHHHHHHhh-cChhhhhhhC-CeeCC-CcHhhhhhhhhh--------hccccCcchhhhhheehhhc-CCH
Confidence 999 99999999988885 3333222111 10000 111122333443 234 3689999999987775 456
Q ss_pred HHHHHHHHH
Q 013368 307 ESLERRIVE 315 (444)
Q Consensus 307 ~~i~~~i~~ 315 (444)
+++.+++++
T Consensus 312 ~~~~d~l~~ 320 (553)
T COG4187 312 KELFDRLKE 320 (553)
T ss_pred HHHHHHHHH
Confidence 666666543
No 67
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.74 E-value=6.2e-16 Score=150.19 Aligned_cols=134 Identities=21% Similarity=0.248 Sum_probs=106.7
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccC--
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS-- 104 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~-- 104 (444)
.++.+++|++|+++||+| +.|.++++++.++|+++|++++. + +..|+++.++|.. +.++|+|.||||+|+.
T Consensus 2 ~~~~~~lLk~Lv~~~s~S--G~E~~V~~~l~~~l~~~g~ev~~-D---~~Gnlia~~~g~~-~~~~v~l~aHmDevG~~V 74 (343)
T TIGR03106 2 TDYLTETLLALLAIPSPT--GFTDAVVRYVAERLEDLGIEYEL-T---RRGAIRATLPGRE-ATPARAVVTHLDTLGAMV 74 (343)
T ss_pred hHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHcCCeEEE-C---CCeEEEEEECCCC-CCCeEEEEEeecccccee
Confidence 467889999999999985 88999999999999999998874 3 4569999987743 2478999999999933
Q ss_pred --------------CC----------------CC---------Cc------------cCCCc---c--------------
Q 013368 105 --------------EP----------------SK---------WS------------HHPFG---A-------------- 116 (444)
Q Consensus 105 --------------~~----------------~~---------W~------------~~Pf~---~-------------- 116 (444)
++ .+ .. .++++ .
T Consensus 75 ~~I~~~G~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~ 154 (343)
T TIGR03106 75 RELKDNGRLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVR 154 (343)
T ss_pred eEECCCCeEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHH
Confidence 10 00 00 01111 0
Q ss_pred ----------------eecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCc
Q 013368 117 ----------------HLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG 169 (444)
Q Consensus 117 ----------------~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 169 (444)
.. +++++|||+ .|||+++++++.+++.|.+.+.+++.+|+++|+.+||.|+
T Consensus 155 lGV~~Gd~v~~~~~~~~~-~~~~i~gr~-~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ 221 (343)
T TIGR03106 155 LGISVGDFVAFDPQPEFL-ANGFIVSRH-LDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGS 221 (343)
T ss_pred cCCCCCCEEEECCccEEe-cCCEEEEEe-cccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCc
Confidence 02 388999998 9999999999999999998877788999999999999984
No 68
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.74 E-value=5.5e-17 Score=155.12 Aligned_cols=123 Identities=18% Similarity=0.219 Sum_probs=97.3
Q ss_pred CCCChhHHHHHHHHHHHHCCCceEEEeec--------C--------CCCeEEEEecCCCCCCCcEEEEeecccccCCCCC
Q 013368 45 PNPDYTNASKFILAQAEALSLESQTLEFA--------K--------NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSK 108 (444)
Q Consensus 45 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~--------~--------~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~ 108 (444)
++++|.++++||+++|+++|++++.++.. . ...||++.++|.. .+.|+|.||+|||++...
T Consensus 50 gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~--~~~Ill~AH~DTV~p~~~- 126 (346)
T PRK10199 50 GSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKA--PQQIIIMAHLDTYAPQSD- 126 (346)
T ss_pred CCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCC--CCeEEEEEEcCcCCCCCC-
Confidence 46789999999999999999998754321 0 1257999998853 378999999999975421
Q ss_pred CccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhc
Q 013368 109 WSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (444)
Q Consensus 109 W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (444)
...++. .+.++++|++|||+|++++|++++.|++.+ ++.+|.|+++++||.|. .|+++++++
T Consensus 127 -~~~~~~-----~~g~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl-~GS~~~~~~ 188 (346)
T PRK10199 127 -ADVDAN-----LGGLTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGK-LGAENLLKR 188 (346)
T ss_pred -CccccC-----CCCcccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCc-HHHHHHHHh
Confidence 111222 233899999999999999999999998654 67899999999999984 899999986
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=99.74 E-value=3.9e-16 Score=152.04 Aligned_cols=257 Identities=16% Similarity=0.216 Sum_probs=175.6
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC-----
Q 013368 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE----- 105 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~----- 105 (444)
+++|++|+++||+| +.|.+++++++++|+++|++++. + +..|+++.+.|. +.|+|+|.||||+|+.-
T Consensus 3 ~~~L~~L~~~~s~s--G~E~~v~~~i~~~l~~~~~~v~~-D---~~Gnvi~~~~g~--~~~~v~l~aHmDevg~~V~~I~ 74 (344)
T PRK09961 3 LSLLKALSEADAIA--SSEQEVRQILLEEADRLQKEVRF-D---GLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSIS 74 (344)
T ss_pred HHHHHHHHhCCCCC--CChHHHHHHHHHHHHhhCCEEEE-C---CCCCEEEEEcCC--CCCEEEEEeccceeceEEEEEC
Confidence 46799999999996 89999999999999999998764 3 566999988663 23799999999999431
Q ss_pred --------C-CCCcc----------------------------CCCc-ceec----------------------------
Q 013368 106 --------P-SKWSH----------------------------HPFG-AHLD---------------------------- 119 (444)
Q Consensus 106 --------~-~~W~~----------------------------~Pf~-~~~~---------------------------- 119 (444)
+ .+|+. +++. ..++
T Consensus 75 ~~G~l~~~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~ 154 (344)
T PRK09961 75 REGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQV 154 (344)
T ss_pred CCceEEEEeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEE
Confidence 0 12211 1111 0000
Q ss_pred -CCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEeccCCCCc
Q 013368 120 -SQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLAST 198 (444)
Q Consensus 120 -~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~g~~~p 198 (444)
+++++.||. .|++.++++++++++.+++. +++.+++++|+..||.|. +|++..... ++ .|+++++|... .|
T Consensus 155 ~~~~~i~gka-lDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~-rGa~~aa~~--i~-pd~~I~vDv~~-~~ 226 (344)
T PRK09961 155 LPHQRVMGKA-FDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGL-RGGQTATRA--VS-PDVAIVLDTAC-WA 226 (344)
T ss_pred ecCCEEEEee-chhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccch-HHHHHHHhc--cC-CCEEEEEeccC-CC
Confidence 366777866 99999999999999999755 368999999999999995 799887652 43 47788887321 00
Q ss_pred CCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCC
Q 013368 199 TEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTP 278 (444)
Q Consensus 199 ~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~ 278 (444)
. .|... ......+..|
T Consensus 227 d---------------------------~~~~~-----------------------------------~~~~~~lg~G-- 242 (344)
T PRK09961 227 K---------------------------NFDYG-----------------------------------AANHRQIGNG-- 242 (344)
T ss_pred C---------------------------CCCCC-----------------------------------CCcccccCCC--
Confidence 0 00000 0000011111
Q ss_pred CCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccCCCChHHHHHHH
Q 013368 279 SPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATDSSNPWWNLLEE 358 (444)
Q Consensus 279 ~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~ 358 (444)
..+.+.. . ....+..+++.+.+
T Consensus 243 ---------------------------------------------p~i~~~D--------~-----~~i~~~~l~~~l~~ 264 (344)
T PRK09961 243 ---------------------------------------------PMLVLSD--------K-----SLIAPPKLTAWIET 264 (344)
T ss_pred ---------------------------------------------ceEEEcc--------C-----CcCCCHHHHHHHHH
Confidence 1111110 0 02235567777777
Q ss_pred HHHHhcCCCCCceeecCCcchHHHHh--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHH
Q 013368 359 AVRKANGKLGKPEIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESIIKAY 428 (444)
Q Consensus 359 a~~~~~~~~~~~~~~~g~tD~~~~~~--~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 428 (444)
++++.+.+.......+|+||++.+.. .|+|++.+||+.. ..|+++|+++++++..+++++..++..+
T Consensus 265 ~A~~~~Ip~Q~~~~~ggGTDa~~~~~~~~Giptv~ig~p~r---y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 265 VAAEIGIPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPATR---HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHcCCCcEEEecCCCcchHHHHHHhCCCCCEEEechhhh---cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 77777654411112346799997755 7999999999865 5999999999999999999999998765
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.71 E-value=3.7e-15 Score=144.69 Aligned_cols=254 Identities=16% Similarity=0.186 Sum_probs=172.2
Q ss_pred HHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC------
Q 013368 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE------ 105 (444)
Q Consensus 32 ~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~------ 105 (444)
++|++|+++|++| +.|.+++++++++|++++.+++.. ...|+++.+.|.+.+.|+|+|.||||+|+.-
T Consensus 2 ~~L~~L~~~~gpS--G~E~~v~~~i~~~l~~~~~~v~~D----~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~ 75 (350)
T TIGR03107 2 NKIKEVTELQGTS--GFEHPIRDYLRQDITPLVDQVETD----GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKP 75 (350)
T ss_pred hHHHHHHhCCCCC--CCcHHHHHHHHHHHHhhCCEEEEC----CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECC
Confidence 5699999999986 899999999999999999887643 3459999876631234799999999999211
Q ss_pred -------C-CCCc-------------c-C-C------------------------Cc-ce--------------------
Q 013368 106 -------P-SKWS-------------H-H-P------------------------FG-AH-------------------- 117 (444)
Q Consensus 106 -------~-~~W~-------------~-~-P------------------------f~-~~-------------------- 117 (444)
+ .+|+ . . + +. ..
T Consensus 76 ~G~l~~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd 155 (350)
T TIGR03107 76 DGTFRVVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGD 155 (350)
T ss_pred CceEEEEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCC
Confidence 0 1111 0 0 0 00 00
Q ss_pred ----------ecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCce
Q 013368 118 ----------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (444)
Q Consensus 118 ----------~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~ 187 (444)
..+++++.||. .|++.|+++++++++.|++. +++.+++++|+..||.| .+|++.... .++ .|+
T Consensus 156 ~v~~~~~~~~~~~~~~i~~ka-lDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG-~rGA~~aa~--~i~-pD~ 228 (350)
T TIGR03107 156 VIVPQTETILTANGKNVISKA-WDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVG-LRGAHVSTT--KFN-PDI 228 (350)
T ss_pred EEEECCCeEEEcCCCEEEEec-cccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcC-chhhhhHHh--hCC-CCE
Confidence 10245677777 89999999999999999765 36789999999999999 489997655 343 488
Q ss_pred EEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhchhccCCcee
Q 013368 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVS 267 (444)
Q Consensus 188 ~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t 267 (444)
+|++|.+... . .|.. ..
T Consensus 229 aI~vDv~~~~-d---------------------------~~~~-~~---------------------------------- 245 (350)
T TIGR03107 229 FFAVDCSPAG-D---------------------------IYGD-QG---------------------------------- 245 (350)
T ss_pred EEEEecCCcC-C---------------------------CCCC-Cc----------------------------------
Confidence 8998843210 0 0000 00
Q ss_pred eeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccC
Q 013368 268 VNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATD 347 (444)
Q Consensus 268 ~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 347 (444)
..+..| ..+.+.. . ...
T Consensus 246 ---~~lg~G-----------------------------------------------p~i~~~D-------~------~~i 262 (350)
T TIGR03107 246 ---GKLGEG-----------------------------------------------TLLRFFD-------P------GHI 262 (350)
T ss_pred ---cccCCC-----------------------------------------------ceEEEec-------C------CCC
Confidence 000001 1110000 0 012
Q ss_pred CCChHHHHHHHHHHHhcCCCCCceeecCCcchH--HHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 013368 348 SSNPWWNLLEEAVRKANGKLGKPEIFPASTDAR--YFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 425 (444)
Q Consensus 348 ~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~--~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 425 (444)
.+..+.+.+.+++++.+.+. .....+|+||++ ++...|+|++.+|.+.. ..|++.|.++++++...++++..++
T Consensus 263 ~~~~l~~~l~~~A~~~~I~~-Q~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R---y~Hs~~e~i~~~D~~~~~~Ll~~~i 338 (350)
T TIGR03107 263 MLPRMKDFLLTTAEEAGIKY-QYYVAKGGTDAGAAHLKNSGVPSTTIGVCAR---YIHSHQTLYSIDDFLAAQAFLQAIV 338 (350)
T ss_pred CCHHHHHHHHHHHHHcCCCc-EEecCCCCchHHHHHHhCCCCcEEEEccCcc---cccChhheeeHHHHHHHHHHHHHHH
Confidence 24456666666666666554 223345789999 56678999999887655 4999999999999999999999999
Q ss_pred HHH
Q 013368 426 KAY 428 (444)
Q Consensus 426 ~~l 428 (444)
..+
T Consensus 339 ~~l 341 (350)
T TIGR03107 339 KKL 341 (350)
T ss_pred Hhc
Confidence 876
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.65 E-value=4.4e-14 Score=135.56 Aligned_cols=152 Identities=19% Similarity=0.302 Sum_probs=113.9
Q ss_pred hHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC--
Q 013368 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE-- 105 (444)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~-- 105 (444)
++.+++|++|..++++| +.|.++.+++++.|++++.+++.. +..|+++.++|.+ +.+.|++.+|||++..-
T Consensus 2 ~~~~~~LkeL~~~~gps--G~E~eVr~~~~~el~~~~~ev~~D----~lGnlia~~~g~~-g~~~imi~AHmDEiG~mV~ 74 (355)
T COG1363 2 EELLELLKELLEAPGPS--GYEEEVRDVLKEELEPLGDEVEVD----RLGNLIAKKGGKN-GPPKVMIAAHMDEIGFMVK 74 (355)
T ss_pred hHHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHHHhCCceEEc----CCCcEEEEecCCC-CCccEEEEeecceeeeeEE
Confidence 56789999999999986 899999999999999999988743 4559999998732 34679999999999210
Q ss_pred -----------C-CCCccC---------------CCcce-------------------------e---------------
Q 013368 106 -----------P-SKWSHH---------------PFGAH-------------------------L--------------- 118 (444)
Q Consensus 106 -----------~-~~W~~~---------------Pf~~~-------------------------~--------------- 118 (444)
+ .+|... ++.+. +
T Consensus 75 ~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI 154 (355)
T COG1363 75 EIEDDGFLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGI 154 (355)
T ss_pred EECCCceEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCC
Confidence 0 122111 00000 0
Q ss_pred --------------cCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcccccc
Q 013368 119 --------------DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNS 184 (444)
Q Consensus 119 --------------~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 184 (444)
-.++++-+|. .|+|.+++++|++++.| + +.+++.+++++|+..||.| ++|++..... ++
T Consensus 155 ~vGd~v~~~~~~~~l~~~~i~ska-lDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVG-lrGA~~~a~~--i~- 227 (355)
T COG1363 155 RVGDFVVFDPRFRELANGRVVSKA-LDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVG-LRGAKTSAFR--IK- 227 (355)
T ss_pred CCCCEEEEcCceEEecCCcEEeee-ccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhc-cchhhccccc--cC-
Confidence 0235565655 89999999999999999 4 6678999999999999999 5898886653 43
Q ss_pred CceEEEecc
Q 013368 185 LNVGIVLDE 193 (444)
Q Consensus 185 ~d~~~~~~~ 193 (444)
.|+++.+|.
T Consensus 228 pd~aiavd~ 236 (355)
T COG1363 228 PDIAIAVDV 236 (355)
T ss_pred CCEEEEEec
Confidence 377787764
No 72
>PRK09864 putative peptidase; Provisional
Probab=99.61 E-value=1.4e-13 Score=133.41 Aligned_cols=255 Identities=15% Similarity=0.176 Sum_probs=170.6
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEecCCCCCCCcEEEEeecccccCC-----
Q 013368 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE----- 105 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~----- 105 (444)
+++|++|+++|++| +.|.++++++.++|++++.+++. + ...|+++.. |. +.++|+|.||||+|+.-
T Consensus 3 ~~~L~~L~~~~g~S--G~E~~v~~~l~~~l~~~~dev~~-D---~~GNli~~~-g~--~~~kvml~AHmDevG~mV~~I~ 73 (356)
T PRK09864 3 IELLQQLCEASAVS--GDEQEVRDILINTLEPCVNEITF-D---GLGSFVARK-GN--KGPKVAVVGHMDEVGFMVTHID 73 (356)
T ss_pred HHHHHHHHcCCCCC--CchHHHHHHHHHHHHHhCCEEEE-C---CCCCEEEEe-CC--CCcEEEEEecccccCEEEEEEC
Confidence 56799999999986 89999999999999999998764 3 345999986 53 23699999999999221
Q ss_pred --------C-CCCcc--------------C-CCcce--------------------------------------------
Q 013368 106 --------P-SKWSH--------------H-PFGAH-------------------------------------------- 117 (444)
Q Consensus 106 --------~-~~W~~--------------~-Pf~~~-------------------------------------------- 117 (444)
+ .+|+. . ++.+.
T Consensus 74 ~~G~l~~~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD 153 (356)
T PRK09864 74 ESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGD 153 (356)
T ss_pred CCCeEEEEeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCC
Confidence 0 12211 1 11110
Q ss_pred ----------ecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCce
Q 013368 118 ----------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (444)
Q Consensus 118 ----------~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~ 187 (444)
. .++++.||. .|++.|+++++++++.|++ ++.+++++|+..||.| .+|++..... ++ .|+
T Consensus 154 ~v~~~~~~~~l-~~~~i~~ka-lDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvG-lrGA~~aa~~--i~-PDi 223 (356)
T PRK09864 154 FISPEANFACW-GEDKVVGKA-LDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVG-LRGAQTSAEH--IK-PDV 223 (356)
T ss_pred EEEECCCcEEE-cCCEEEEEe-CccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcc-hHHHHHHHhc--CC-CCE
Confidence 1 256676766 8999999999999999854 6799999999999999 5899987653 43 488
Q ss_pred EEEeccCCCCcCCcceeeecccccEEEEEEEeecCCccCCCCCCCHHHHHHHHHHHHHhchhhhhHHHHhchhccCCcee
Q 013368 188 GIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDNSAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVS 267 (444)
Q Consensus 188 ~~~~~~g~~~p~~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t 267 (444)
+|++|.+.. .. .|... . .
T Consensus 224 aIavDvt~~-~d---------------------------~p~~~--------------~--------------------~ 241 (356)
T PRK09864 224 VIVLDTAVA-GD---------------------------VPGID--------------N--------------------I 241 (356)
T ss_pred EEEEecccC-CC---------------------------CCCCc--------------c--------------------c
Confidence 999885321 00 00000 0 0
Q ss_pred eeeeeeccCCCCCCCcccccccCceEEEEEeecCCCCCHHHHHHHHHHHhccCCCCceEEEeecccccccCCCCCccccC
Q 013368 268 VNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEFKQRASLHDKFGRPILTATD 347 (444)
Q Consensus 268 ~~~~~i~~G~~~~~~~~~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 347 (444)
-....+-.|. . +|+. . . ...
T Consensus 242 ~~~~~lG~Gp------~-------------i~~~----------------------------D-----------~--~~i 261 (356)
T PRK09864 242 KYPLKLGQGP------G-------------LMLF----------------------------D-----------K--RYF 261 (356)
T ss_pred ccccccCCCC------e-------------EEEc----------------------------c-----------C--Ccc
Confidence 0001111111 0 0111 0 0 012
Q ss_pred CCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHh--cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 013368 348 SSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRE--RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYESII 425 (444)
Q Consensus 348 ~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~--~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 425 (444)
.+..+.+.+.+++++.+.+........|+||+..++. .|+|++..+...+ ..|++.|-++++++...++++..++
T Consensus 262 ~~~~l~~~l~~~A~~~~Ip~Q~~~~~~ggTDa~~i~~~~~Gvpt~~isiP~R---Y~Hs~~e~~~~~D~e~~~~Ll~~~~ 338 (356)
T PRK09864 262 PNQKLVAALKSCAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTR---YLHANSGMISKADYDALLTLIRDFL 338 (356)
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEcCCCCchHHHHHHhCCCCcEEEEeeccC---cCCCcceEeEHHHHHHHHHHHHHHH
Confidence 2445666666666666655411122347899988754 5899987775444 4999999999999999999999999
Q ss_pred HHHH
Q 013368 426 KAYA 429 (444)
Q Consensus 426 ~~l~ 429 (444)
..+.
T Consensus 339 ~~l~ 342 (356)
T PRK09864 339 TTLT 342 (356)
T ss_pred Hhcc
Confidence 8763
No 73
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.52 E-value=4.4e-14 Score=115.26 Aligned_cols=105 Identities=22% Similarity=0.295 Sum_probs=88.4
Q ss_pred ecccccEEEEEEEeecCCccCCCCCC-CHHHHHHHHHHHHHhchhhhhHHHHhchhccCCceeeeeeeeccCCCCCCCcc
Q 013368 206 YAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFV 284 (444)
Q Consensus 206 ~~~~G~~~~~i~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~i~~G~~~~~~~~ 284 (444)
++++|..+++|+++|+++|+|.|+.+ ||+..+++++..|..+..+.... ........++++++.+++|. .
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~---~~~~~~~~~~~~~~~i~gG~------~ 71 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFR---PEEFFPGPPTLNIGSIEGGT------A 71 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTST---HHHCTCTSEEEEEEEEEEES------S
T ss_pred CcCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccc---cccccccccceeEeecccCC------c
Confidence 47899999999999999999999988 99999999999998764321000 00122345889999999998 9
Q ss_pred cccccCceEEEEEeecCCCCCHHHHHHHHHHHhcc
Q 013368 285 MNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP 319 (444)
Q Consensus 285 ~n~ip~~~~~~~d~R~~~~~~~~~i~~~i~~~~~~ 319 (444)
.|+||++|++++++|+.|.++.+++.+.|++.+++
T Consensus 72 ~n~ip~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~ 106 (111)
T PF07687_consen 72 PNVIPDEATLTVDIRYPPGEDLEEIKAEIEAAVEK 106 (111)
T ss_dssp TTEESSEEEEEEEEEESTCHHHHHHHHHHHHHHHH
T ss_pred CCEECCEEEEEEEEECCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988863
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.85 E-value=1.2e-08 Score=106.38 Aligned_cols=145 Identities=27% Similarity=0.340 Sum_probs=108.9
Q ss_pred hhHHHHHHHhhhcc-cCCCCC-CChhHHHHHHHHHHHHCCCceEE----Eeec-----------------CCCCeEEEEe
Q 013368 27 DDSIIERFRAYLQI-DTSQPN-PDYTNASKFILAQAEALSLESQT----LEFA-----------------KNKPLILLKW 83 (444)
Q Consensus 27 ~~~~~~~l~~l~~i-~s~s~~-~~e~~~~~~l~~~l~~~G~~~~~----~~~~-----------------~~~~nl~~~~ 83 (444)
.+|..+.+.++.++ |.+..+ .+|..+.+++.+.+.++.-..+. .+.+ .+..||++++
T Consensus 56 ~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki 135 (834)
T KOG2194|consen 56 EARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKI 135 (834)
T ss_pred HHHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEec
Confidence 46788889999998 555433 35668888988887776322221 1110 2446999998
Q ss_pred cCCCC-CCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEee
Q 013368 84 PGSNP-QLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFV 162 (444)
Q Consensus 84 ~g~~~-~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 162 (444)
.+... +..-|++.+|+|+||.++ ||.|+..++|++|+++|.+.+....+..+|+++|.
T Consensus 136 ~~k~~~~~~~lLlnaHfDSvpt~~---------------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfN 194 (834)
T KOG2194|consen 136 SPKNGNDKNALLLNAHFDSVPTGP---------------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFN 194 (834)
T ss_pred CCCCCCccceeeeeccccccCCCC---------------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEec
Confidence 65443 333799999999999874 77899999999999999999988788999999999
Q ss_pred cCcccCccccHHHHHhcccc-ccCceEEEecc
Q 013368 163 PDEEIGGHDGAEKFADSHVF-NSLNVGIVLDE 193 (444)
Q Consensus 163 ~~EE~g~~~G~~~~~~~~~~-~~~d~~~~~~~ 193 (444)
.+||.+ +.|+..++.++.. ..+...+.+|.
T Consensus 195 gaEE~~-L~gsH~FItQH~w~~~~ka~INLea 225 (834)
T KOG2194|consen 195 GAEESG-LLGSHAFITQHPWSKNIKAVINLEA 225 (834)
T ss_pred Ccccch-hhhcccceecChhhhhhheEEeccc
Confidence 999988 6899999986644 33455666664
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.77 E-value=1.1e-08 Score=90.78 Aligned_cols=86 Identities=28% Similarity=0.391 Sum_probs=66.4
Q ss_pred cEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccc
Q 013368 92 SILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHD 171 (444)
Q Consensus 92 ~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~ 171 (444)
.|++.||+|+++... ++ -++.|+.|+.+|++++|++++.|.+.+.+++.+|+|+++.+||.| +.
T Consensus 2 ~ivi~aH~Ds~~~~~--------------~~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~g-l~ 65 (179)
T PF04389_consen 2 YIVIGAHYDSVGGDA--------------DG-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQG-LL 65 (179)
T ss_dssp EEEEEEE--BESCCC---------------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGT-SH
T ss_pred EEEEEeecCCCCCcC--------------CC-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccC-cc
Confidence 589999999998221 22 566799999999999999999999977778899999999999998 58
Q ss_pred cHHHHHhcc--ccccCceEEEecc
Q 013368 172 GAEKFADSH--VFNSLNVGIVLDE 193 (444)
Q Consensus 172 G~~~~~~~~--~~~~~d~~~~~~~ 193 (444)
|++.++++. ...++.+.+.+|.
T Consensus 66 GS~~~~~~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 66 GSRAFVEHDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHHHHHHHHCHHHHEEEEEEECS
T ss_pred chHHHHHhhhcccccceeEEeccc
Confidence 999999732 2334456777774
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.49 E-value=6.4e-07 Score=85.39 Aligned_cols=66 Identities=29% Similarity=0.383 Sum_probs=54.5
Q ss_pred CCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhccccccCceEEEecc
Q 013368 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDE 193 (444)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~d~~~~~~~ 193 (444)
++++.||. .|++.++++++++++.|++.+ +..+++++|++.||.|. +|+...... ++ .|+++++|.
T Consensus 125 ~~~i~gka-lDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~-rGA~~aa~~--i~-PD~ai~vD~ 190 (292)
T PF05343_consen 125 NGRIVGKA-LDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGL-RGAKTAAFR--IK-PDIAIAVDV 190 (292)
T ss_dssp TTEEEETT-HHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTS-HHHHHHHHH--H--CSEEEEEEE
T ss_pred CCEEEEEe-CCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecC-cceeecccc--cC-CCEEEEEee
Confidence 66688887 899999999999999998764 46999999999999994 899987663 33 478888874
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=4.9e-05 Score=69.43 Aligned_cols=133 Identities=18% Similarity=0.168 Sum_probs=95.9
Q ss_pred hhHHHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC-------CCCeEEEEecCCCCCCCcEEEEeec
Q 013368 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK-------NKPLILLKWPGSNPQLPSILLNSHT 99 (444)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~-------~~~nl~~~~~g~~~~~~~i~l~~H~ 99 (444)
..+..+.|.-+. +|-+-++.+..++.+||.+.|.++|+.++.....+ .-.|+++++... ....+++.+|+
T Consensus 50 ~~~~~~~L~p~l-v~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~--A~r~lVlachy 126 (338)
T KOG3946|consen 50 WNRLWENLLPIL-VPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPN--ASRYLVLACHY 126 (338)
T ss_pred HHHHHHhhhhhh-ccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCC--cchheeeeccc
Confidence 344555544433 34433467888999999999999999888654322 134899998654 33678999999
Q ss_pred ccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcC----CCCcceEEEEeecCcc-------cC
Q 013368 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASG----FQPVRSVYLSFVPDEE-------IG 168 (444)
Q Consensus 100 Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE-------~g 168 (444)
|+--.. ++. =+|+.|...+||+++..++.|.+.- ......+.++|.-+|| ..
T Consensus 127 dsk~~p---------------~~~--~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~D 189 (338)
T KOG3946|consen 127 DSKIFP---------------GGM--FVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPED 189 (338)
T ss_pred ccccCC---------------Ccc--eEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCcc
Confidence 996543 222 2489999999999999999987632 2345789999999998 24
Q ss_pred ccccHHHHHhc
Q 013368 169 GHDGAEKFADS 179 (444)
Q Consensus 169 ~~~G~~~~~~~ 179 (444)
+..|++.+.++
T Consensus 190 SlYGsRhLA~~ 200 (338)
T KOG3946|consen 190 SLYGSRHLAAK 200 (338)
T ss_pred ccchHHHHHHH
Confidence 57899998874
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.59 E-value=0.00016 Score=73.54 Aligned_cols=91 Identities=24% Similarity=0.257 Sum_probs=67.0
Q ss_pred CeEEEEecCCCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcce
Q 013368 77 PLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRS 156 (444)
Q Consensus 77 ~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 156 (444)
.|+++++.+.......+...+|.|.+-... .++ +..-.+.|+.|+..|++++|+++|.|+... ++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------a~~--~s~~~~~GA~DNasGva~llEiAr~l~~~~--p~~~ 251 (435)
T COG2234 185 KNVAATISGSSQIIEAIIGTAHSDSLGLLG---------AHI--DSVPTGPGADDNASGVAALLELARVLKGNP--PKRT 251 (435)
T ss_pred EEEeeeeecccccceEEEeccCCCceeeec---------ccc--cCCcCCCCcccccHHHHHHHHHHHHHhcCC--CCce
Confidence 366666665522234566666666665542 111 334445699999999999999999998875 7899
Q ss_pred EEEEeecCcccCccccHHHHHhccc
Q 013368 157 VYLSFVPDEEIGGHDGAEKFADSHV 181 (444)
Q Consensus 157 i~~~~~~~EE~g~~~G~~~~~~~~~ 181 (444)
|.|++...||.| +.|+.+++.+..
T Consensus 252 v~f~~~~aEE~G-l~GS~~~~~~~~ 275 (435)
T COG2234 252 VRFVAFGAEESG-LLGSEAYVKRLS 275 (435)
T ss_pred EEEEEecchhhc-ccccHHHHhcCC
Confidence 999999999998 589999998754
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=97.07 E-value=0.0017 Score=68.49 Aligned_cols=82 Identities=26% Similarity=0.325 Sum_probs=64.5
Q ss_pred CCCeEEEEecCCCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHH---HHcCC
Q 013368 75 NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL---KASGF 151 (444)
Q Consensus 75 ~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l---~~~~~ 151 (444)
...||++.++|+.....-|++.+|-|+.-. |+.|..+|.+.+++..+.+ ++.++
T Consensus 337 ki~NIig~I~Gs~epD~~ViigahrDSw~~-----------------------Ga~dp~sGta~Ll~i~~~~~~~~k~gw 393 (702)
T KOG2195|consen 337 KIQNIIGKIEGSEEPDRYVIIGAHRDSWTF-----------------------GAIDPNSGTALLLEIARALSKLKKRGW 393 (702)
T ss_pred eeeeEEEEEecCcCCCeEEEEecccccccc-----------------------CCcCCCccHHHHHHHHHHHHHHHHcCC
Confidence 356999999995543468999999887443 3677777877777766655 55789
Q ss_pred CCcceEEEEeecCcccCccccHHHHHhcc
Q 013368 152 QPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (444)
Q Consensus 152 ~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (444)
++.++|+|+.+.+||-|. .|+-.+++..
T Consensus 394 rP~RtI~F~sWdAeEfGl-iGStE~~E~~ 421 (702)
T KOG2195|consen 394 RPRRTILFASWDAEEFGL-LGSTEWAEEY 421 (702)
T ss_pred CccceEEEEEccchhccc-cccHHHHHHH
Confidence 999999999999999984 7999888854
No 80
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0049 Score=59.87 Aligned_cols=100 Identities=17% Similarity=0.276 Sum_probs=72.0
Q ss_pred CCeEEEEec-C-----CCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHc
Q 013368 76 KPLILLKWP-G-----SNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS 149 (444)
Q Consensus 76 ~~nl~~~~~-g-----~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~ 149 (444)
.+|+.+++. | ++...|+|++.+|+||....+. +--|+..+.+|+.++|+.++.+.+.
T Consensus 193 i~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~-----------------lsvgADSNGSGvvaLLelarlfSkl 255 (555)
T KOG2526|consen 193 ILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPG-----------------LSVGADSNGSGVVALLELARLFSKL 255 (555)
T ss_pred cceEEeecccccccccccccCCeEEEEEeccccccCCC-----------------CCCCCCCCCccHHHHHHHHHHHHHH
Confidence 468999886 3 2346899999999999988641 1125555667888999999988773
Q ss_pred ----CCCCcceEEEEeecCcccCccccHHHHHhc--cccc-cCceEEEecc
Q 013368 150 ----GFQPVRSVYLSFVPDEEIGGHDGAEKFADS--HVFN-SLNVGIVLDE 193 (444)
Q Consensus 150 ----~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~--~~~~-~~d~~~~~~~ 193 (444)
.-..+.|+.|+.+.+.-.. ..|.+.+++- ..++ .+|+++|+|.
T Consensus 256 y~ypsTrakYnLlF~lt~aG~lN-yqGTkkWLe~dd~~lq~nVdfaiCLdt 305 (555)
T KOG2526|consen 256 YDYPSTRAKYNLLFILTAAGKLN-YQGTKKWLEFDDADLQKNVDFAICLDT 305 (555)
T ss_pred hcCcccccceeEEEEEccCcccc-ccchhhhhhcchHHHHhcccEEEEhhh
Confidence 1245789999999876655 3688888763 2333 5789999873
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.47 E-value=0.046 Score=50.39 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=57.5
Q ss_pred CcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHc---CCCCcceEEEEeecCccc
Q 013368 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS---GFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 91 ~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~ 167 (444)
|.|++.+.||+...-. +- +.|+.+.-.|++++|++++.|.+. ...++.+|.|.|..+|--
T Consensus 1 ~iIlv~armDs~s~F~--------------~~---s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~ 63 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH--------------DL---SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESF 63 (234)
T ss_pred CEEEEEecccchhccc--------------CC---CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccc
Confidence 5799999999987641 11 358888889999999999999875 235789999999999999
Q ss_pred CccccHHHHHhc
Q 013368 168 GGHDGAEKFADS 179 (444)
Q Consensus 168 g~~~G~~~~~~~ 179 (444)
|. .|+..|+.+
T Consensus 64 dY-iGS~R~vyD 74 (234)
T PF05450_consen 64 DY-IGSSRFVYD 74 (234)
T ss_pred cc-cchHHHHHH
Confidence 85 799888864
No 82
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=94.84 E-value=0.032 Score=53.34 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=55.1
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCceeecCCcchHHHHhc--CCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLGKPEIFPASTDARYFRER--GLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDI 420 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~g~tD~~~~~~~--gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~ 420 (444)
..+..+.+.+.+++++.+.+........|+||++.++.. |+|++.++.... ..|++.|.++++++...+++
T Consensus 220 i~~~~l~~~l~~~A~~~~Ip~Q~~~~~~ggTDa~~~~~~~~Gi~t~~i~iP~r---y~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEENGIPYQREVFSGGGTDAGAIQLSGGGIPTAVISIPCR---YMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp ESHHHHHHHHHHHHHHTT--EEEEEESSSSSTHHHHHTSTTSSEEEEEEEEEB---STTSTTEEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEecCCcccHHHHHHHcCCCCCEEEEecccc---cCCCcceEEEHHHHHHHhhC
Confidence 446789999999999988765222445689999999865 899988875544 49999999999999988764
No 83
>PRK02256 putative aminopeptidase 1; Provisional
Probab=93.86 E-value=0.11 Score=52.83 Aligned_cols=76 Identities=14% Similarity=0.200 Sum_probs=61.7
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee-----ecCCcchHHHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013368 348 SSNPWWNLLEEAVRKANGKLGKPEI-----FPASTDARYFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 422 (444)
Q Consensus 348 ~~~~l~~~~~~a~~~~~~~~~~~~~-----~~g~tD~~~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 422 (444)
.+..++..+.+++++.+.+...... .+|+||+.+++..|+|++-+|.... .+|++.|-+..+++...++++.
T Consensus 380 ~~~~~~~~i~~iA~~~~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l---~MHS~rE~~~~~D~~~~~~ll~ 456 (462)
T PRK02256 380 ANAEFVAEVRNLFNKNNVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL---SMHSPFEIASKADIYETYKAYK 456 (462)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh---ccccHHHHhhHHHHHHHHHHHH
Confidence 3778888899999888776522112 2589998888888999999997766 4999999999999999999998
Q ss_pred HHHH
Q 013368 423 SIIK 426 (444)
Q Consensus 423 ~~l~ 426 (444)
.++.
T Consensus 457 ~f~~ 460 (462)
T PRK02256 457 AFLE 460 (462)
T ss_pred HHHh
Confidence 8764
No 84
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=91.10 E-value=0.49 Score=48.36 Aligned_cols=82 Identities=12% Similarity=0.128 Sum_probs=62.4
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCce---eecCCcchHHHH--hcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLGKPE---IFPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~~~~---~~~g~tD~~~~~--~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
..|..+...+++++++.+.+..... ..++|++++.+. ..|+|++-+|+.-. .+|++.|-+..+++...++++
T Consensus 372 ~td~~~~a~i~~la~~~~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l---~MHS~rE~~~~~D~~~~~~l~ 448 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKANIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQL---AMHSIREMCGVVDIYYLVKLI 448 (465)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhc---ccccHHHHccHHHHHHHHHHH
Confidence 3468889999999998876542211 223467766553 47999999998776 399999999999999999999
Q ss_pred HHHHHHHHcc
Q 013368 422 ESIIKAYASY 431 (444)
Q Consensus 422 ~~~l~~l~~~ 431 (444)
..++..+...
T Consensus 449 ~af~~~~~~~ 458 (465)
T PTZ00371 449 KAFFTNYSKV 458 (465)
T ss_pred HHHHHhhhhh
Confidence 9988764433
No 85
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=90.93 E-value=3.9 Score=39.26 Aligned_cols=119 Identities=14% Similarity=0.140 Sum_probs=73.7
Q ss_pred HHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeecC-----------------CCC-eEEEEecCCC-CCCC
Q 013368 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK-----------------NKP-LILLKWPGSN-PQLP 91 (444)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~-----------------~~~-nl~~~~~g~~-~~~~ 91 (444)
+.+-|+|++.|.-- -.....++++++.++++|++++.++... ..| -++.+|.|.+ ...+
T Consensus 1 vn~aRdL~n~P~n~--~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~ 78 (311)
T PF00883_consen 1 VNLARDLVNTPPNI--LTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKK 78 (311)
T ss_dssp HHHHHHHHHS-TTT--SSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSE
T ss_pred ChHHHhhhCCChhh--cCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCc
Confidence 35678899998842 4566889999999999999998776420 122 2445666654 3445
Q ss_pred cEEEEee---cccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCccc
Q 013368 92 SILLNSH---TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 92 ~i~l~~H---~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (444)
+|+|.|= +||=... .+- .+.+. +=-.+++|.|+.+.+++++.+.+ ++.+|..+....|-.
T Consensus 79 ~i~LVGKGiTFDtGG~~----------lKp--~~~M~--~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN~ 141 (311)
T PF00883_consen 79 PIALVGKGITFDTGGLS----------LKP--SGGME--GMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAENM 141 (311)
T ss_dssp EEEEEEEEEEEEE-TTS----------SSC--STTGG--GGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE-
T ss_pred cEEEEcceEEEecCCcc----------CCC--Ccchh--hcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEccccc
Confidence 6777664 3332221 000 11110 11334578889999999999876 568898888888753
No 86
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=90.55 E-value=5.2 Score=40.96 Aligned_cols=125 Identities=15% Similarity=0.125 Sum_probs=75.8
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
.+.+.|+|++-|.-- -.....++++++.+++.|++++.++.. .+.+.+++.=+|+.. .|.++..-+... .
T Consensus 156 ~~~~aRdL~n~P~n~--~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~-~p~lv~l~Y~g~---~ 229 (468)
T cd00433 156 GVNLARDLVNTPAND--LTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEE-PPRLIVLEYKGK---G 229 (468)
T ss_pred HHHHHHHhhcCCccc--CCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCC-CCEEEEEEECCC---C
Confidence 456788888888842 345678899999999999999987743 245556666556543 355544333221 1
Q ss_pred CCCCccCCCcceecCCCeEEecC---------cccc---hhHHHHHHHHHHHHHHcCCCCcceEEEEeecCccc
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARG---------SQDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG---------~~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (444)
+ ...|... +- .|.-|=-| =.+| ++|.|+.+.+++++.+.+ ++.+|..+....|-.
T Consensus 230 ~---~~~~i~L-VG-KGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN~ 296 (468)
T cd00433 230 A---SKKPIAL-VG-KGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAENM 296 (468)
T ss_pred C---CCCcEEE-Ec-CceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeecC
Confidence 1 0111111 10 11111111 1223 367789999999999876 588999988888853
No 87
>PRK02813 putative aminopeptidase 2; Provisional
Probab=90.46 E-value=0.48 Score=47.87 Aligned_cols=76 Identities=9% Similarity=0.055 Sum_probs=58.5
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcee---ecCCcchHHHH--hcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHH
Q 013368 348 SSNPWWNLLEEAVRKANGKLGKPEI---FPASTDARYFR--ERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYE 422 (444)
Q Consensus 348 ~~~~l~~~~~~a~~~~~~~~~~~~~---~~g~tD~~~~~--~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 422 (444)
.+......+.+++++.+.+...... .+||+|++.+. +.|+|++-.|..-. .+|++.|-+..+++...++++.
T Consensus 346 t~~~~~a~~~~ia~~~~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l---~MHS~~E~~~~~D~~~~~~l~~ 422 (428)
T PRK02813 346 TDAESAAVFKLLCEKAGVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML---AMHSARELAGVKDHAYLIKALT 422 (428)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc---ccccHHHHccHHHHHHHHHHHH
Confidence 4678888899999888765422112 23677777664 46999999997766 4999999999999999999998
Q ss_pred HHHH
Q 013368 423 SIIK 426 (444)
Q Consensus 423 ~~l~ 426 (444)
.++.
T Consensus 423 ~f~~ 426 (428)
T PRK02813 423 AFFS 426 (428)
T ss_pred HHhc
Confidence 7653
No 88
>PRK02256 putative aminopeptidase 1; Provisional
Probab=87.29 E-value=0.94 Score=46.15 Aligned_cols=49 Identities=33% Similarity=0.457 Sum_probs=38.5
Q ss_pred CCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHH
Q 013368 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (444)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (444)
++.|.|++ -|++.++.+++.+++.+. ++...++++++..||+|+ .|+..
T Consensus 251 ~efI~s~r-LDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs-~ga~g 299 (462)
T PRK02256 251 RSLIGAYG-QDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS-EGNTG 299 (462)
T ss_pred cceeeccc-cccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC-cchhh
Confidence 66777765 899999999999987653 356789999999999995 45544
No 89
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=86.80 E-value=1.4 Score=42.47 Aligned_cols=63 Identities=24% Similarity=0.171 Sum_probs=44.5
Q ss_pred CeEEEEecCCCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcce
Q 013368 77 PLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRS 156 (444)
Q Consensus 77 ~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 156 (444)
.|+++.-.+ .+.++++.+|+|+=-. |..|+-.|++..++++..|..++ ..
T Consensus 179 y~~Ia~~~~---en~vv~i~AH~DHW~~-----------------------G~tDN~lg~~~AV~~~~~lr~~~----~~ 228 (486)
T COG4882 179 YNVIAVDGG---ENGVVLIGAHLDHWYT-----------------------GFTDNILGVAQAVETAGRLRGRG----LA 228 (486)
T ss_pred EEEEEecCC---CCCceEEeechhhhhh-----------------------cccchhhhHHHHHHHHHHHhhcC----cc
Confidence 366665322 2368999999998444 44566669999999999988765 34
Q ss_pred EEEEeecCcccCc
Q 013368 157 VYLSFVPDEEIGG 169 (444)
Q Consensus 157 i~~~~~~~EE~g~ 169 (444)
..++..+.||.|+
T Consensus 229 ~~lv~FtAEE~g~ 241 (486)
T COG4882 229 AGLVVFTAEEHGM 241 (486)
T ss_pred eeEEEEeccccCC
Confidence 6677778888775
No 90
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=85.80 E-value=16 Score=37.53 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=74.4
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
.+.+.|+|++.|.-- -.....++++++.++++|++++..+.. .+...+++.=+|+.. .|.++..-+. |..
T Consensus 173 ~~~~aRdL~n~P~n~--~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~-~prli~l~Y~---g~~ 246 (483)
T PRK00913 173 GVNLARDLVNEPPNI--LTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSAN-PPRLIVLEYK---GGK 246 (483)
T ss_pred HHHHHHHhhCCChhh--cCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCC-CCeEEEEEEC---CCC
Confidence 455678888888742 345678888888899999999877643 245567776566542 3454443332 100
Q ss_pred CCCCccCCCcceecCCCeEEecC---------ccc---chhHHHHHHHHHHHHHHcCCCCcceEEEEeecCccc
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARG---------SQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG---------~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (444)
.|.. -+- .|.-|=-| -.+ +.+|.|+.+.+++++.+.+ ++.+|+.+....|-.
T Consensus 247 ------~~i~-LVG-KGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~ENm 310 (483)
T PRK00913 247 ------KPIA-LVG-KGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACENM 310 (483)
T ss_pred ------CeEE-EEc-CceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeeccC
Confidence 1111 010 11111111 112 2367788999999998876 688999998888864
No 91
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=83.31 E-value=21 Score=36.68 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=69.0
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCC-CceEEEeec----CCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALS-LESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G-~~~~~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
.+.+.|+|++.|.-. -.....++. .+.|++.+ ++++.++.. .+.+.+++.=+|+. ..|+++.. +=-+.
T Consensus 169 ~v~~aRdLvN~P~n~--l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~-~~Prlivl---~y~g~ 241 (485)
T COG0260 169 GVNLARDLVNTPANI--LTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSA-RPPRLIVL---EYNGK 241 (485)
T ss_pred HHHHHHHHhhCCccc--CCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCC-CCCeEEEE---EcCCC
Confidence 467889999999853 344566667 67777765 888876643 24445666655543 23544422 11111
Q ss_pred CCCCCccCCCcceecCCCeEEecCc---------------ccch---hHHHHHHHHHHHHHHcCCCCcceEEEEeecCcc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARGS---------------QDMK---CVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE 166 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG~---------------~D~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 166 (444)
.. +..|. .+.|.|. .+|| +|.|+.+.++.++.+.+ ++.+++.+....|-
T Consensus 242 ~~---~~~~i--------aLVGKGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~EN 308 (485)
T COG0260 242 GK---AKKPI--------ALVGKGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVEN 308 (485)
T ss_pred CC---CCceE--------EEEcCceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeecc
Confidence 00 00010 1222221 2233 57788899999998876 67889888888875
Q ss_pred c
Q 013368 167 I 167 (444)
Q Consensus 167 ~ 167 (444)
.
T Consensus 309 m 309 (485)
T COG0260 309 M 309 (485)
T ss_pred C
Confidence 4
No 92
>PRK05015 aminopeptidase B; Provisional
Probab=80.35 E-value=55 Score=32.88 Aligned_cols=127 Identities=15% Similarity=0.107 Sum_probs=71.6
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHC---CCceEEEeec----CCCCeEEEEecCCCCCCCcEEEEeecccc
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL---SLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~---G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtv 102 (444)
...+.|+|++-|.-- -.....++...++++++ +++++.++.. .+...+++.=+|+. .|..++.-++ -
T Consensus 102 ~~~~aRdLvn~P~n~--ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~--~pP~lv~L~Y--~ 175 (424)
T PRK05015 102 IIDWVRDTINAPAEE--LGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSE--RPPVLLALDY--N 175 (424)
T ss_pred HHHHHHHHhcCCccc--CCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCC--CCCEEEEEEe--c
Confidence 466789999999842 34456677777777776 5777766543 24445666655653 3444443333 2
Q ss_pred cCCCCCCccCCCc-ceecCCCeEEecCc---------cc---chhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC
Q 013368 103 PSEPSKWSHHPFG-AHLDSQGNIFARGS---------QD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (444)
Q Consensus 103 p~~~~~W~~~Pf~-~~~~~~g~l~GrG~---------~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (444)
|.+.. ..|.. .-+- .|.-|=-|- .. +.+|.|+.+.+++.+.+.+ ++.+|..++...|-.-
T Consensus 176 ~~g~~---~~~v~~aLVG-KGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~~--l~~nV~~il~~aENmi 248 (424)
T PRK05015 176 PTGDP---DAPVYACLVG-KGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITRG--LNKRVKLFLCCAENLI 248 (424)
T ss_pred CCCCC---CCCeeEEEec-CceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhcC--CCceEEEEEEecccCC
Confidence 32211 11210 1111 122211111 11 2256678888888887775 6789999999888643
No 93
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=78.52 E-value=37 Score=35.33 Aligned_cols=125 Identities=12% Similarity=0.067 Sum_probs=72.6
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceE-EEeec----CCCCeEEEEecCCCCCCCcEEEEeecccccC
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ-TLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPS 104 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~-~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~ 104 (444)
.+.+.|+|++-|.-- -.....++.+++.+++.|++++ ..+.. .+...+++.=+|+.. .|.++.. ++. +.
T Consensus 214 ~vn~ARdLvn~P~N~--ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~-pPrli~L-~Y~--g~ 287 (569)
T PTZ00412 214 CVNEARNLGNLREDE--GVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRH-EPYLVVF-EYI--GN 287 (569)
T ss_pred HHHHHHHhccCChhh--cCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCC-CCEEEEE-EeC--CC
Confidence 455788999988842 3445677888887888899986 55432 244456666556532 2444433 332 11
Q ss_pred CCCCCccCCCcceecCCCeEEecC---------cccc---hhHHHHHHHHHHHHHHcCCCCcceEEEEeecCccc
Q 013368 105 EPSKWSHHPFGAHLDSQGNIFARG---------SQDM---KCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (444)
Q Consensus 105 ~~~~W~~~Pf~~~~~~~g~l~GrG---------~~D~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (444)
.+ ...|... +- .|.-|=-| -.+| .+|.|+.+.+++++.+.+ ++.+|+.+....|-.
T Consensus 288 ~~---~~~~iaL-VG-KGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaENm 355 (569)
T PTZ00412 288 PR---SSAATAL-VG-KGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAENA 355 (569)
T ss_pred CC---CCCcEEE-Ec-CceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhcC
Confidence 11 0112211 11 22222111 1222 367788899999998875 678999988888864
No 94
>PRK02813 putative aminopeptidase 2; Provisional
Probab=77.04 E-value=2.7 Score=42.51 Aligned_cols=48 Identities=23% Similarity=0.156 Sum_probs=36.6
Q ss_pred CCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccc---cHHH
Q 013368 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHD---GAEK 175 (444)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~---G~~~ 175 (444)
++.+.|. .-|++.++.+++.|+..+.+ ...++++++..||+|+ . |+..
T Consensus 225 ~e~i~s~-~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs-~~~~GA~s 275 (428)
T PRK02813 225 GEFISSG-RLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGS-ATKQGADS 275 (428)
T ss_pred CCEEEEe-cchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCC-CCCcccCc
Confidence 3445444 48999999999999876532 5789999999999996 5 6663
No 95
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=75.46 E-value=5.5 Score=40.77 Aligned_cols=53 Identities=13% Similarity=0.079 Sum_probs=35.6
Q ss_pred CCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEe-ecCcccCccccHHH
Q 013368 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSF-VPDEEIGGHDGAEK 175 (444)
Q Consensus 121 ~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~-~~~EE~g~~~G~~~ 175 (444)
++.+.|.+ -|++.++.+++.|+..+.....+.+..+.+++ +..||+|+ .|+.-
T Consensus 242 ~e~i~s~r-lDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs-~ga~G 295 (465)
T PTZ00371 242 EEFISSPR-LDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS-SSSQG 295 (465)
T ss_pred CCeEEEec-chhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC-Ccchh
Confidence 55666655 89999999999998876432001234455555 88999996 55554
No 96
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=71.54 E-value=16 Score=35.84 Aligned_cols=64 Identities=20% Similarity=0.172 Sum_probs=40.7
Q ss_pred ecCCCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCcceEEEEee
Q 013368 83 WPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFV 162 (444)
Q Consensus 83 ~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 162 (444)
++|. ....|+|.+|+.+-.. |+|+-+|++..+..++.|++.. ...+..|+|.
T Consensus 124 ipG~--s~~EillsthiCHPsm------------------------ANdnLSG~~v~~~La~~L~~~~--~rytYRflf~ 175 (386)
T PF09940_consen 124 IPGE--SDEEILLSTHICHPSM------------------------ANDNLSGPAVLTFLAKWLKQLP--NRYTYRFLFV 175 (386)
T ss_dssp E--S--SS-EEEEEEE----S-------------------------TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE
T ss_pred ecCC--CCCeEEEEEeccCccc------------------------ccccccHHHHHHHHHHHHhcCC--cCceEEEEEc
Confidence 3665 3479999999976332 3677789999999999998765 3499999999
Q ss_pred cCcccCccccHHHHHhc
Q 013368 163 PDEEIGGHDGAEKFADS 179 (444)
Q Consensus 163 ~~EE~g~~~G~~~~~~~ 179 (444)
|+ ..|+-.++.+
T Consensus 176 Pe-----TIGsI~yLsk 187 (386)
T PF09940_consen 176 PE-----TIGSITYLSK 187 (386)
T ss_dssp -T-----THHHHHHHHH
T ss_pred cc-----cHHHHHHHHH
Confidence 94 2466555554
No 97
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=69.32 E-value=9.2 Score=38.00 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=59.1
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCc----eeecCCcchH-HHHhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLGKP----EIFPASTDAR-YFRERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~~~----~~~~g~tD~~-~~~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
..|+..+..+++++++.+.+.... ...+|+|=.. ..++.|++++-+|+.-.. +|++.|-....++....+.|
T Consensus 353 ~td~~~~a~~~~l~~~~~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~~Ls---MHS~rE~~g~~D~~~~~~~~ 429 (437)
T COG1362 353 ATDSEGIALLRKLAQKAGVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPALLS---MHSIRELSGSADLYEAYKAL 429 (437)
T ss_pred ccCchHHHHHHHHHHHcCCceEEEEecccCCCCcccchhHHhhcCCceeecchhhhh---hccHHHHcchhHHHHHHHHH
Confidence 337888899999998887644111 1223555444 556779999999998774 99999999999999999999
Q ss_pred HHHHHH
Q 013368 422 ESIIKA 427 (444)
Q Consensus 422 ~~~l~~ 427 (444)
..++.+
T Consensus 430 ~aFf~~ 435 (437)
T COG1362 430 SAFFEN 435 (437)
T ss_pred HHHHhc
Confidence 887764
No 98
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=62.47 E-value=1.2e+02 Score=31.34 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=72.6
Q ss_pred HHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEeec----CCCCeEEEEecCCCCCCCcEEEEeecccccCC
Q 013368 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (444)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~----~~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~ 105 (444)
...+-|+|...|.-- -.....++++.+++.+.|+.++.++.. .+...+.+.-.++. ..|.++...|..+-|..
T Consensus 191 ~~~lar~l~d~PaN~--Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~-~pP~ll~lsY~g~~~~~ 267 (513)
T KOG2597|consen 191 AQNLARRLGDTPANR--MTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASC-EPPRLLELSYKGTSGAD 267 (513)
T ss_pred HHHHHHHhccCChhh--cCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccC-CCCEEEEEEEcCCCCCc
Confidence 344556666555521 245678899999999999887765432 12223333333432 34666766666654332
Q ss_pred CCCCccCCCcceecCCCeEEecCcc------------cchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccC
Q 013368 106 PSKWSHHPFGAHLDSQGNIFARGSQ------------DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (444)
Q Consensus 106 ~~~W~~~Pf~~~~~~~g~l~GrG~~------------D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (444)
.|+- .+- .|.-|--|-. -+++|.|+++.+++++.+.+ ++.++.+++.-.|-.-
T Consensus 268 ------~~i~-lvG-KGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~ 332 (513)
T KOG2597|consen 268 ------KTIL-LVG-KGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMP 332 (513)
T ss_pred ------ceEE-EEe-cceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCC
Confidence 1111 111 2333322221 13356788999999998876 4588888888888644
No 99
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=60.00 E-value=1.5e+02 Score=30.93 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=60.0
Q ss_pred HHHHHHHHCCCceEEEeecC------CCCeEEEEecCCC-CCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEec
Q 013368 55 FILAQAEALSLESQTLEFAK------NKPLILLKWPGSN-PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFAR 127 (444)
Q Consensus 55 ~l~~~l~~~G~~~~~~~~~~------~~~nl~~~~~g~~-~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~Gr 127 (444)
+....+++.|.++..+.+.. +..|+++.+++.. .+...++| +||.+.. +
T Consensus 93 ~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~-------------~------ 148 (617)
T KOG3566|consen 93 WAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRS-------------S------ 148 (617)
T ss_pred HHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccC-------------C------
Confidence 46677777798876554421 2469999987433 34455665 5665421 1
Q ss_pred CcccchhHHHHHHHHHHHHHHcCCCCcceEEEEeecCcccCccccHHHHHhcc
Q 013368 128 GSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (444)
Q Consensus 128 G~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (444)
|. +..+++.+++.++.++... -...+|+++++-++ ..|...+++.+
T Consensus 149 ~~--~~~~v~l~lsla~~f~r~~-yWsKDII~v~~d~~----~~g~~AwLeaY 194 (617)
T KOG3566|consen 149 GS--NSASVALLLSLADYFSRWV-YWSKDIIFVFTDGP----ALGLDAWLEAY 194 (617)
T ss_pred Cc--chhHHHHHHHHHHHhcCCe-eecccEEEEEeCCc----cccHHHHHHHh
Confidence 11 1357777777777766544 36789999998763 35888888764
No 100
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M18, (clan MH). The proteins have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal aminoacid, usually neutral or hydrophobic, from a polypeptide []. The type example is aminopeptidase I from Saccharomyces cerevisiae (Baker's yeast), the sequence of which has been deduced, and the mature protein shown to consist of 469 amino acids []. A 45-residue presequence contains both positively- and negatively-charged and hydrophobic residues, which could be arranged in an N-terminal amphiphilic alpha-helix []. The presequence differs from signal sequences that direct proteins across bacterial plasma membranes and endoplasmic reticulum or into mitochondria. It is unclear how this unique presequence targets aminopeptidase I to yeast vacuoles, and how this sorting utilises classical protein secretory pathways [].; GO: 0004177 aminopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1Y7E_A 2GLJ_R 4DYO_A 2IJZ_B 3VAT_A 3VAR_A 2GLF_B.
Probab=46.75 E-value=29 Score=35.15 Aligned_cols=75 Identities=11% Similarity=0.076 Sum_probs=51.2
Q ss_pred CCCChHHHHHHHHHHHhcCCCC----CceeecCCcchHHH-HhcCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHH
Q 013368 347 DSSNPWWNLLEEAVRKANGKLG----KPEIFPASTDARYF-RERGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIY 421 (444)
Q Consensus 347 ~~~~~l~~~~~~a~~~~~~~~~----~~~~~~g~tD~~~~-~~~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~ 421 (444)
..|..-...+.+..++.+.... +....+|+|=...+ ++.|++++=+|..-.. +|++.|-....++...+++|
T Consensus 352 atd~~~~a~~~~i~~~~~ip~Q~f~~r~d~~~GsTiGpi~sa~~gi~tvDiG~P~Ls---MHS~rE~~g~~D~~~~~~~~ 428 (432)
T PF02127_consen 352 ATDAASAAVFREICEKAGIPWQEFVNRSDDPGGSTIGPILSARLGIRTVDIGIPQLS---MHSIRETAGKKDIYYLYKAF 428 (432)
T ss_dssp SS-HHHHHHHHHHHHHHH--EEEEESSSTSSS--HHHHHHHHCCTSEEEEEE-EEES---TTSSSEEEEHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCeEEEEecCCCCCCccHHHHHHHhcCCCEEEechhhhh---cccHHHHhccccHHHHHHHH
Confidence 3355666777777777764331 11233567777766 5579999999988774 99999999999999999988
Q ss_pred HHH
Q 013368 422 ESI 424 (444)
Q Consensus 422 ~~~ 424 (444)
..+
T Consensus 429 ~aF 431 (432)
T PF02127_consen 429 KAF 431 (432)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 101
>PRK09929 hypothetical protein; Provisional
Probab=46.12 E-value=91 Score=24.07 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=38.0
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCCChhHHHHHHHhhhcccCCC--CCCChhHHHHHHHHHHHHCCCceEEEe
Q 013368 1 MRNRHRLLHICFVFYQLIIFSSPAKSDDSIIERFRAYLQIDTSQ--PNPDYTNASKFILAQAEALSLESQTLE 71 (444)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~i~s~s--~~~~e~~~~~~l~~~l~~~G~~~~~~~ 71 (444)
|++...+++..+.++....+...+.+.++.-..-..|-++.++| ..+....+.+-|.+.-.+.|-...++.
T Consensus 1 ~~~~~~~~~~al~~lS~~A~AA~~i~~~qa~~~~~~l~kiGtVSvs~~~s~~d~~~~La~KAd~~GA~yY~Ii 73 (91)
T PRK09929 1 MKIISKMLLGALAFAVTNVYAAELMTKAEFEKVESQYEKIGTISTSNEMSTADAKEDLIKKADEKGADVLVLT 73 (91)
T ss_pred ChhHHHHHHHHHHHhchhhhhhhhhCHHHhhhhhcccceeEEEEEcCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 66665555544554443344333333333211122334444433 223566788888999999999876554
No 102
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=42.94 E-value=1.6e+02 Score=30.72 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=50.6
Q ss_pred CCeEEEEecC-CCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHHHHcCCCCc
Q 013368 76 KPLILLKWPG-SNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPV 154 (444)
Q Consensus 76 ~~nl~~~~~g-~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~ 154 (444)
+.|+++.++. ++++...+++..-+++. ++.. +.++++.+++.++.+++... ..
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~------------------~~~~-------n~~~v~l~lal~~~~~~~~~-ws 56 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDS------------------DGEY-------NAGGVALALALARYFRRQSY-WS 56 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCC------------------Cccc-------chhhHHHHHHHHHHhhhchh-hh
Confidence 3489998864 33345567776544321 1111 14588999999999988764 68
Q ss_pred ceEEEEeecCcccCccccHHHHHhcc
Q 013368 155 RSVYLSFVPDEEIGGHDGAEKFADSH 180 (444)
Q Consensus 155 ~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (444)
.+|+++++.+|. .|++..++++
T Consensus 57 KDii~l~~~~~~----~g~~awl~~Y 78 (504)
T PF04114_consen 57 KDIIFLFTDDEL----AGMQAWLEAY 78 (504)
T ss_pred ccEEEEecCCcc----hHHHHHHHHH
Confidence 999999986542 4788888764
No 103
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=36.42 E-value=44 Score=33.67 Aligned_cols=88 Identities=24% Similarity=0.228 Sum_probs=56.5
Q ss_pred CCeEEEEecCCCC-CCCcEEEEeecccccCCC----CCCccCCCcceecCCCeEE-ecCcccchhHHHHHHHHHHHHHHc
Q 013368 76 KPLILLKWPGSNP-QLPSILLNSHTDVVPSEP----SKWSHHPFGAHLDSQGNIF-ARGSQDMKCVGMQYLEAIRRLKAS 149 (444)
Q Consensus 76 ~~nl~~~~~g~~~-~~~~i~l~~H~Dtvp~~~----~~W~~~Pf~~~~~~~g~l~-GrG~~D~k~~~a~~l~a~~~l~~~ 149 (444)
.+|+....+.... +...+.|-||+|-||.-. -+...+|....++ +.++- .+|+ |+ .++++.++.+.-
T Consensus 46 ~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~-~~~l~~~~Ga-d~-i~~~~~~a~L~~---- 118 (414)
T COG2195 46 LGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVN-PQILKATLGA-DN-IGLAIGLAVLSP---- 118 (414)
T ss_pred hccccccccccCCCCeeeEEeeccccccccccccccccccccccccccC-CceeeeccCc-ch-hhhhhHHhhcCc----
Confidence 3455555433221 234577999999999542 2334577778886 88887 6774 44 555555544321
Q ss_pred CCCCcceEEEEeecCcccCccccHH
Q 013368 150 GFQPVRSVYLSFVPDEEIGGHDGAE 174 (444)
Q Consensus 150 ~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (444)
...++.+.++.+||++. .|+.
T Consensus 119 ---~~~P~~~~~t~~~ei~~-dGa~ 139 (414)
T COG2195 119 ---EHFPLEVLLTGDEEITT-DGAT 139 (414)
T ss_pred ---ccCCceeeeecceEEec-cCcc
Confidence 36789999999999874 5666
No 104
>PF11131 PhrC_PhrF: Rap-phr extracellular signalling
Probab=34.76 E-value=79 Score=19.62 Aligned_cols=21 Identities=19% Similarity=0.385 Sum_probs=14.3
Q ss_pred cchHHHHHHHHHHHHHhcCCC
Q 013368 4 RHRLLHICFVFYQLIIFSSPA 24 (444)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ 24 (444)
|.+++++|+.+...+......
T Consensus 2 KsKl~l~CLA~aavF~~a~va 22 (37)
T PF11131_consen 2 KSKLFLICLAAAAVFTAAGVA 22 (37)
T ss_pred chhHHHHHHHHHHHHHhhccc
Confidence 567788999888755544443
No 105
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=34.19 E-value=3.9e+02 Score=24.86 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=56.6
Q ss_pred CCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEEecCcccchhHHHHHHHHHHHH--HHcCCCCcceEEEEe--ec
Q 013368 88 PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRL--KASGFQPVRSVYLSF--VP 163 (444)
Q Consensus 88 ~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~GrG~~D~k~~~a~~l~a~~~l--~~~~~~~~~~i~~~~--~~ 163 (444)
++.|++-+.|-+=-+..-|+ . -|.+ +|..|.++++..|++.+ ++.+..+++++++.- ++
T Consensus 29 g~aptlGIiGRLGgigARP~----------~--iGlV-----SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp 91 (276)
T PF06675_consen 29 GSAPTLGIIGRLGGIGARPE----------R--IGLV-----SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICP 91 (276)
T ss_pred CCCCeeEEEeeccccccccc----------c--eeee-----ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCC
Confidence 45678887777655544321 0 2222 77778888888777765 467888999999874 33
Q ss_pred Cc-----c----cCccccHHHHHhccccccCceEEEecc
Q 013368 164 DE-----E----IGGHDGAEKFADSHVFNSLNVGIVLDE 193 (444)
Q Consensus 164 ~E-----E----~g~~~G~~~~~~~~~~~~~d~~~~~~~ 193 (444)
+= | .++..+...+.++......|..+.+|.
T Consensus 92 ~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 92 DAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred CCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 31 1 344567777776654455677777773
No 106
>PRK06742 flagellar motor protein MotS; Reviewed
Probab=33.11 E-value=3.8e+02 Score=24.44 Aligned_cols=14 Identities=36% Similarity=0.612 Sum_probs=11.8
Q ss_pred cEEEEeecccccCC
Q 013368 92 SILLNSHTDVVPSE 105 (444)
Q Consensus 92 ~i~l~~H~Dtvp~~ 105 (444)
.|.+.||.|..|..
T Consensus 147 ~I~I~GHTD~~~~~ 160 (225)
T PRK06742 147 PIVVEGHTDSRPIH 160 (225)
T ss_pred eEEEEEeCCCCCCc
Confidence 59999999998864
No 107
>KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism]
Probab=32.35 E-value=48 Score=32.78 Aligned_cols=81 Identities=12% Similarity=0.166 Sum_probs=60.6
Q ss_pred CChHHHHHHHHHHHhcCCC----CCceeecCCcchHHHHh-cCCCeEEEccCCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 013368 349 SNPWWNLLEEAVRKANGKL----GKPEIFPASTDARYFRE-RGLPAIGFSPMANTPILLHDHNEFLNQAEYLKGIDIYES 423 (444)
Q Consensus 349 ~~~l~~~~~~a~~~~~~~~----~~~~~~~g~tD~~~~~~-~gip~v~~gp~~~~~~~~H~~~E~i~~~~l~~~~~~~~~ 423 (444)
+..-..++++.+++...+. ++-...+|+|=...++. .|+.++-+|..... +|+..|...-.++..++++|-.
T Consensus 388 n~v~~~l~kevA~~~~vplQ~fvVrNdspcGsTIGPiLAS~~G~RTlDlG~pqLs---MHSiRe~~gs~dv~~~~~lFk~ 464 (479)
T KOG2596|consen 388 NSVGSALVKEVAELAKVPLQDFVVRNDSPCGSTIGPILASKTGIRTLDLGIPQLS---MHSIREMCGSKDVEQAVKLFKG 464 (479)
T ss_pred cchhHHHHHHHHHHcCCCceeEEEecCCCCccccchhhhhhcCceeeecCchhhh---hHHHHHHhCcccHHHHHHHHHH
Confidence 4455556666666665433 12223458888888865 59999999877764 9999999999999999999999
Q ss_pred HHHHHHccc
Q 013368 424 IIKAYASYV 432 (444)
Q Consensus 424 ~l~~l~~~~ 432 (444)
+.+++..+.
T Consensus 465 Ff~~f~sv~ 473 (479)
T KOG2596|consen 465 FFERFSSVE 473 (479)
T ss_pred HHHHhhHHH
Confidence 999886554
No 108
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=27.64 E-value=41 Score=26.22 Aligned_cols=9 Identities=33% Similarity=0.349 Sum_probs=4.4
Q ss_pred CCccchHHH
Q 013368 1 MRNRHRLLH 9 (444)
Q Consensus 1 m~~~~~~~~ 9 (444)
|-.|..+||
T Consensus 1 MaSK~~llL 9 (95)
T PF07172_consen 1 MASKAFLLL 9 (95)
T ss_pred CchhHHHHH
Confidence 665543333
No 109
>KOG3374 consensus Cellular repressor of transcription [Transcription]
Probab=26.36 E-value=3e+02 Score=23.95 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=14.4
Q ss_pred CcceEEEEeecCcccCccccHHHHHh
Q 013368 153 PVRSVYLSFVPDEEIGGHDGAEKFAD 178 (444)
Q Consensus 153 ~~~~i~~~~~~~EE~g~~~G~~~~~~ 178 (444)
+.|.+..+-.++||..- ....+..
T Consensus 141 lsG~v~k~~~~~~~~~~--~~~alf~ 164 (210)
T KOG3374|consen 141 LSGQVKKMDPSDKSYQP--SLDALFR 164 (210)
T ss_pred ecceEEEeCCcchhhhh--hhhhHhh
Confidence 56777777777776542 4444443
No 110
>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]
Probab=23.83 E-value=1.9e+02 Score=27.15 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=20.2
Q ss_pred CChhHHHH-HHHHHHHHCCCceEEEeec
Q 013368 47 PDYTNASK-FILAQAEALSLESQTLEFA 73 (444)
Q Consensus 47 ~~e~~~~~-~l~~~l~~~G~~~~~~~~~ 73 (444)
..+.+..+ +.+..+++.|++.+.++..
T Consensus 38 ~p~a~ile~~~k~~~~k~Gi~l~i~~Ft 65 (268)
T COG1464 38 GPHAEILEVVVKPALKKKGLDLKIVEFT 65 (268)
T ss_pred CchHHHHHHHHHHHHHhcCceEEEEEec
Confidence 34456666 7888888999999887754
No 111
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=23.19 E-value=74 Score=27.36 Aligned_cols=34 Identities=6% Similarity=0.194 Sum_probs=27.5
Q ss_pred hhcccCCCCCCChhHHHHHHHHHHHHCCCceEEEee
Q 013368 37 YLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF 72 (444)
Q Consensus 37 l~~i~s~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~ 72 (444)
|+-..|. +|+-.+++++|...|++.|.+++.++.
T Consensus 4 LIlYstr--~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 4 LILYSTR--DGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred EEEEecC--CCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 4445554 588899999999999999999987664
No 112
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=21.74 E-value=1.7e+02 Score=29.96 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=46.0
Q ss_pred CChhHHHHHHHHHHHHCCCceEEEeecCCCCeEEEEec--CCCC----CCCc-EEEEeecccccCCCCCCccCCCcceec
Q 013368 47 PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP--GSNP----QLPS-ILLNSHTDVVPSEPSKWSHHPFGAHLD 119 (444)
Q Consensus 47 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nl~~~~~--g~~~----~~~~-i~l~~H~Dtvp~~~~~W~~~Pf~~~~~ 119 (444)
.+|.-.+..+..+|++.|++.+.++.. ...+.+-. +..+ .... +...-+-+.||.-. -|.+..+
T Consensus 117 ~GE~~Sa~lla~~L~~~Gv~A~~~~~~---~~~i~t~~~~~~a~i~~~~~~~~l~~~~~~~~v~Vv~------GF~G~~~ 187 (447)
T COG0527 117 LGERLSAALLAAALNALGVDARSLDGR---QAGIATDSNHGNARILDEDSERRLLRLLEEGKVPVVA------GFQGINE 187 (447)
T ss_pred hchHHHHHHHHHHHHhCCCceEEEchH---HceeeecCcccccccchhhhhhhHHHHhcCCcEEEec------CceeecC
Confidence 467788889999999999999977642 12232211 1110 0001 22223344455431 2555554
Q ss_pred CCC--eEEecCcccchhHHHHHHHH
Q 013368 120 SQG--NIFARGSQDMKCVGMQYLEA 142 (444)
Q Consensus 120 ~~g--~l~GrG~~D~k~~~a~~l~a 142 (444)
+| ..+|||-+| -.|+.|++
T Consensus 188 -~G~~tTLGRGGSD---~SA~~laa 208 (447)
T COG0527 188 -DGETTTLGRGGSD---YSAAALAA 208 (447)
T ss_pred -CCCEEEeCCCcHH---HHHHHHHH
Confidence 55 578999988 44444444
No 113
>COG1944 Uncharacterized conserved protein [Function unknown]
Probab=20.25 E-value=3.8e+02 Score=26.90 Aligned_cols=70 Identities=14% Similarity=0.165 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHCCCc-eEEEeecC--CCCeEEEEecCCCCCCCcEEEEeecccccCCCCCCccCCCcceecCCCeEE
Q 013368 49 YTNASKFILAQAEALSLE-SQTLEFAK--NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIF 125 (444)
Q Consensus 49 e~~~~~~l~~~l~~~G~~-~~~~~~~~--~~~nl~~~~~g~~~~~~~i~l~~H~Dtvp~~~~~W~~~Pf~~~~~~~g~l~ 125 (444)
..++.++++..|+++|++ +..+..-+ +.|++++..+-. ..+. .-.
T Consensus 16 p~et~~~~q~~l~~~gitrI~~~t~Ld~~gIPv~~a~rp~~----~~~~----------------------------~~~ 63 (398)
T COG1944 16 PEETLAAFQPLLAALGITRIEDITWLDRLGIPVVWAVRPRA----LGLS----------------------------VSQ 63 (398)
T ss_pred HHHHHHHHHHHHHhcCceeeeeeeccccCCCceEEEeeecc----ccce----------------------------eec
Confidence 345889999999999997 55443322 556666654321 1111 335
Q ss_pred ecCcccchhHHHHHHHHHHHHHHcC
Q 013368 126 ARGSQDMKCVGMQYLEAIRRLKASG 150 (444)
Q Consensus 126 GrG~~D~k~~~a~~l~a~~~l~~~~ 150 (444)
|.|+++...-+.+++++++.+....
T Consensus 64 GKGat~~~A~vSAimE~~Er~sAe~ 88 (398)
T COG1944 64 GKGATKAAARVSALMEALERLSAEY 88 (398)
T ss_pred CCCCCHHHHHHHHHHHHHHHhhccc
Confidence 6799998899999999999987654
Done!