Query 013369
Match_columns 444
No_of_seqs 410 out of 3234
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:17:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aji_A 26S proteasome non-ATPa 100.0 3.5E-38 1.2E-42 289.2 22.1 222 1-248 9-230 (231)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 4.8E-38 1.6E-42 292.9 20.6 222 1-247 13-247 (253)
3 3b7b_A Euchromatic histone-lys 100.0 3.1E-37 1.1E-41 284.0 23.6 222 1-244 14-235 (237)
4 2xai_A ASB-9, ankyrin repeat a 100.0 2.5E-37 8.4E-42 289.6 21.7 218 1-249 6-223 (261)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-36 4.2E-41 286.8 26.4 223 1-248 8-245 (285)
6 4b93_B Ankyrin repeat domain-c 100.0 5.3E-38 1.8E-42 295.4 15.2 228 1-249 14-245 (269)
7 2dzn_A Probable 26S proteasome 100.0 6.8E-37 2.3E-41 279.8 21.6 209 1-229 5-218 (228)
8 1oy3_D Transcription factor in 100.0 6.9E-37 2.4E-41 288.7 21.3 211 1-230 12-269 (282)
9 1k1a_A B-cell lymphoma 3-encod 100.0 5.1E-37 1.8E-41 282.9 19.7 220 1-247 12-240 (241)
10 3d9h_A CDNA FLJ77766, highly s 100.0 1.4E-36 4.8E-41 288.3 22.1 219 1-250 62-281 (285)
11 2f8y_A Notch homolog 1, transl 100.0 1.4E-36 4.8E-41 276.9 20.5 218 9-251 2-219 (223)
12 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-36 1.1E-40 285.9 23.2 236 1-260 18-263 (285)
13 3ljn_A Hypothetical protein; a 100.0 1.6E-36 5.5E-41 297.7 21.7 226 1-250 23-271 (364)
14 4g8k_A 2-5A-dependent ribonucl 100.0 6.6E-36 2.3E-40 290.2 24.4 229 1-251 28-301 (337)
15 3utm_A Tankyrase-1; tankyrase, 100.0 8.2E-36 2.8E-40 289.9 24.8 225 1-251 27-308 (351)
16 1oy3_D Transcription factor in 100.0 3E-36 1E-40 284.3 20.8 213 31-262 3-268 (282)
17 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-35 8.3E-40 277.9 25.9 225 1-251 42-281 (285)
18 3eu9_A Huntingtin-interacting 100.0 1.4E-35 4.7E-40 272.6 23.2 224 1-250 12-237 (240)
19 1s70_B 130 kDa myosin-binding 100.0 1.8E-36 6E-41 288.8 17.2 221 1-247 43-289 (299)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 6.2E-36 2.1E-40 278.6 18.1 210 30-258 3-229 (253)
21 1n11_A Ankyrin; clathrin, BAND 100.0 4E-35 1.4E-39 294.8 24.9 196 35-251 177-372 (437)
22 2fo1_E LIN-12 protein; beta-ba 100.0 5.7E-36 2E-40 295.0 18.1 223 1-249 128-372 (373)
23 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-34 3.7E-39 291.6 25.1 224 1-251 17-240 (437)
24 3b7b_A Euchromatic histone-lys 100.0 1.3E-34 4.6E-39 266.3 23.2 209 31-259 5-217 (237)
25 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-34 4.9E-39 281.2 23.9 219 1-249 61-335 (351)
26 2dzn_A Probable 26S proteasome 100.0 2.3E-34 7.8E-39 263.0 23.0 206 37-260 2-216 (228)
27 1k1a_A B-cell lymphoma 3-encod 100.0 4.4E-34 1.5E-38 263.2 24.6 211 31-261 3-225 (241)
28 3hra_A Ankyrin repeat family p 100.0 5.4E-34 1.9E-38 255.5 21.9 194 35-246 3-201 (201)
29 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-33 3.6E-38 264.8 23.5 202 36-260 2-207 (261)
30 4g8k_A 2-5A-dependent ribonucl 100.0 1.2E-33 3.9E-38 274.4 23.2 227 1-251 62-329 (337)
31 1ikn_D Protein (I-kappa-B-alph 100.0 5.4E-35 1.8E-39 269.1 12.2 199 33-250 4-211 (236)
32 2rfa_A Transient receptor pote 100.0 9.4E-34 3.2E-38 259.9 20.1 202 36-251 2-225 (232)
33 2rfa_A Transient receptor pote 100.0 1.4E-33 4.8E-38 258.7 20.5 195 1-204 6-222 (232)
34 3aji_A 26S proteasome non-ATPa 100.0 3.9E-33 1.3E-37 255.5 23.3 204 35-258 4-211 (231)
35 1s70_B 130 kDa myosin-binding 100.0 7.6E-34 2.6E-38 270.6 18.1 243 3-261 3-274 (299)
36 3kea_A K1L; tropism, ANK repea 100.0 1E-33 3.6E-38 268.5 18.7 215 5-251 6-223 (285)
37 3kea_A K1L; tropism, ANK repea 100.0 2.1E-34 7.3E-39 273.2 13.9 213 1-251 34-249 (285)
38 3hra_A Ankyrin repeat family p 100.0 3.7E-33 1.3E-37 250.0 21.2 189 1-202 8-201 (201)
39 2fo1_E LIN-12 protein; beta-ba 100.0 2.1E-34 7.1E-39 283.9 12.2 228 1-251 97-341 (373)
40 2f8y_A Notch homolog 1, transl 100.0 1.3E-32 4.5E-37 250.5 21.9 189 1-204 28-216 (223)
41 3ljn_A Hypothetical protein; a 100.0 3.5E-33 1.2E-37 273.9 17.4 225 1-245 56-312 (364)
42 1ikn_D Protein (I-kappa-B-alph 100.0 4.7E-34 1.6E-38 262.8 10.2 212 1-228 11-228 (236)
43 4b93_B Ankyrin repeat domain-c 100.0 4.8E-33 1.6E-37 261.6 16.7 208 33-260 7-226 (269)
44 4gpm_A Engineered protein OR26 100.0 4.4E-32 1.5E-36 236.7 19.4 156 39-204 6-161 (169)
45 2pnn_A Transient receptor pote 100.0 3.2E-33 1.1E-37 263.2 11.4 213 1-223 16-271 (273)
46 2etb_A Transient receptor pote 100.0 1.8E-32 6.1E-37 255.4 15.4 197 37-250 2-248 (256)
47 2etb_A Transient receptor pote 100.0 3.1E-32 1.1E-36 253.8 15.1 200 1-204 5-246 (256)
48 2pnn_A Transient receptor pote 100.0 1.9E-32 6.6E-37 257.7 13.7 208 33-249 9-259 (273)
49 1sw6_A Regulatory protein SWI6 100.0 1.2E-32 4.1E-37 266.4 10.2 199 3-229 102-326 (327)
50 4gpm_A Engineered protein OR26 100.0 9E-31 3.1E-35 228.4 18.7 159 73-251 6-164 (169)
51 3jxi_A Vanilloid receptor-rela 100.0 8.1E-32 2.8E-36 251.5 12.9 200 1-204 8-250 (260)
52 3jxi_A Vanilloid receptor-rela 100.0 7.3E-32 2.5E-36 251.8 10.9 207 35-251 3-253 (260)
53 3eu9_A Huntingtin-interacting 100.0 1.6E-30 5.6E-35 238.6 19.7 199 33-251 5-205 (240)
54 3v30_A DNA-binding protein rfx 100.0 1.1E-30 3.9E-35 228.1 16.8 170 37-222 2-171 (172)
55 4hbd_A KN motif and ankyrin re 100.0 1.6E-30 5.4E-35 245.4 14.7 188 2-201 80-272 (276)
56 2rfm_A Putative ankyrin repeat 100.0 9.7E-30 3.3E-34 226.4 17.5 164 29-202 27-190 (192)
57 4hbd_A KN motif and ankyrin re 100.0 3.4E-30 1.2E-34 243.1 13.7 191 37-246 76-273 (276)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.6E-29 5.4E-34 218.4 15.7 160 35-204 3-162 (162)
59 3v31_A Ankyrin repeat family A 100.0 6.3E-29 2.2E-33 215.9 18.1 159 36-204 2-160 (167)
60 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.9E-29 2.7E-33 216.0 18.3 158 35-202 12-169 (169)
61 1sw6_A Regulatory protein SWI6 100.0 1.6E-29 5.4E-34 244.5 13.7 230 7-258 56-322 (327)
62 3twr_A Tankyrase-2; ankyrin re 100.0 3.4E-29 1.2E-33 217.2 14.2 160 34-203 5-164 (165)
63 3v30_A DNA-binding protein rfx 100.0 1.2E-28 4.2E-33 215.1 17.9 167 1-182 5-171 (172)
64 2rfm_A Putative ankyrin repeat 100.0 5E-29 1.7E-33 221.8 15.4 164 63-246 27-190 (192)
65 3f6q_A Integrin-linked protein 100.0 7.2E-29 2.4E-33 218.3 16.1 169 35-219 3-171 (179)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-28 4.4E-33 212.6 15.3 154 1-164 8-161 (162)
67 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.3E-28 1.1E-32 208.8 16.2 154 37-201 2-155 (156)
68 1awc_B Protein (GA binding pro 100.0 5.2E-28 1.8E-32 207.1 17.2 151 37-198 2-152 (153)
69 2vge_A RELA-associated inhibit 100.0 1.3E-30 4.6E-35 239.0 0.4 198 15-232 1-201 (229)
70 3v31_A Ankyrin repeat family A 100.0 7.6E-28 2.6E-32 209.1 16.8 159 70-248 2-160 (167)
71 2y1l_E Darpin-8.4; hydrolase-i 100.0 1E-27 3.5E-32 208.9 17.3 161 66-246 9-169 (169)
72 3f6q_A Integrin-linked protein 100.0 1.5E-27 5.1E-32 209.8 16.8 164 69-251 3-166 (179)
73 3twr_A Tankyrase-2; ankyrin re 100.0 5E-28 1.7E-32 209.8 13.3 161 67-247 4-164 (165)
74 1awc_B Protein (GA binding pro 99.9 3.4E-27 1.2E-31 202.0 17.1 148 1-159 5-152 (153)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.8E-28 9.5E-33 225.0 7.7 185 35-230 3-192 (239)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-26 3.4E-31 199.5 15.2 150 1-161 5-154 (156)
77 2vge_A RELA-associated inhibit 99.9 2.4E-29 8.4E-34 230.6 -3.6 182 1-198 24-207 (229)
78 2aja_A Ankyrin repeat family p 99.9 4.9E-28 1.7E-32 237.3 1.9 152 1-166 95-251 (376)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.4E-27 2.5E-31 215.4 8.8 213 1-227 8-226 (239)
80 1d9s_A Cyclin-dependent kinase 99.9 2.1E-25 7.1E-30 187.0 12.1 131 64-204 5-136 (136)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-25 3.6E-30 193.4 9.7 144 66-226 7-151 (156)
82 2aja_A Ankyrin repeat family p 99.9 5.8E-27 2E-31 229.7 1.3 155 34-204 89-250 (376)
83 3t8k_A Uncharacterized protein 99.9 1.5E-25 5.1E-30 198.5 9.2 157 37-202 6-177 (186)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 3.6E-25 1.2E-29 190.1 10.2 143 33-186 8-151 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 6.8E-25 2.3E-29 183.9 11.1 129 31-164 6-135 (136)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-23 4.9E-28 172.5 15.3 124 71-203 2-125 (126)
87 3t8k_A Uncharacterized protein 99.9 1.5E-24 5.2E-29 191.9 9.7 155 71-242 6-177 (186)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 9.6E-24 3.3E-28 176.8 13.0 123 35-161 12-134 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-23 9.6E-28 170.7 15.4 125 36-164 1-125 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-23 4.8E-28 175.8 12.8 127 67-202 10-136 (136)
91 3deo_A Signal recognition part 99.9 5.9E-25 2E-29 194.0 2.5 168 5-201 7-181 (183)
92 3c5r_A BARD-1, BRCA1-associate 99.9 2.9E-23 1E-27 174.0 8.8 127 66-201 5-131 (137)
93 3ui2_A Signal recognition part 99.9 4E-23 1.4E-27 191.0 9.9 142 35-204 43-185 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 4.8E-23 1.6E-27 172.6 8.0 125 33-161 6-130 (137)
95 3ehr_A Osteoclast-stimulating 99.9 4.1E-23 1.4E-27 187.9 7.6 132 65-204 67-198 (222)
96 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-22 8.1E-27 191.6 12.8 126 71-204 151-284 (301)
97 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-22 3.9E-27 193.8 10.5 142 35-192 149-299 (301)
98 3aaa_C Myotrophin, protein V-1 99.9 3.1E-22 1E-26 164.5 9.7 111 35-149 5-115 (123)
99 3ui2_A Signal recognition part 99.9 7.7E-22 2.6E-26 182.3 13.2 137 1-165 48-185 (244)
100 3deo_A Signal recognition part 99.9 8.5E-22 2.9E-26 173.7 12.4 133 1-161 47-180 (183)
101 3ehr_A Osteoclast-stimulating 99.9 2.9E-22 9.8E-27 182.2 9.0 132 30-165 66-198 (222)
102 3aaa_C Myotrophin, protein V-1 99.9 8.3E-22 2.8E-26 161.9 9.9 113 68-189 4-116 (123)
103 1dcq_A PYK2-associated protein 99.8 3.9E-21 1.3E-25 181.0 10.8 126 37-165 130-263 (278)
104 1dcq_A PYK2-associated protein 99.8 2.3E-20 8E-25 175.7 14.2 195 34-250 63-265 (278)
105 3jue_A Arfgap with coiled-coil 99.8 2.5E-20 8.5E-25 182.0 13.6 150 67-229 195-347 (368)
106 3jue_A Arfgap with coiled-coil 99.8 2.3E-20 8E-25 182.1 13.1 147 36-189 198-347 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-19 3.6E-24 141.5 11.8 90 37-129 2-91 (93)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1.8E-19 6.2E-24 183.7 14.4 125 71-204 132-265 (497)
109 3lvq_E ARF-GAP with SH3 domain 99.8 2.2E-19 7.4E-24 183.2 14.1 136 37-188 132-276 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.2E-19 1.1E-23 138.7 11.4 91 105-203 2-92 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 3.3E-19 1.1E-23 144.3 9.0 106 34-143 6-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.5E-19 1.2E-23 144.2 8.9 109 100-223 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 3.7E-17 1.3E-21 131.3 10.5 92 31-125 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.7E-16 5.7E-21 127.4 9.4 93 64-159 17-109 (110)
115 3rhw_A Avermectin-sensitive gl 42.9 64 0.0022 30.0 7.7 30 353-382 243-272 (347)
116 4ev6_A Magnesium transport pro 42.7 22 0.00075 33.2 4.4 25 358-382 283-311 (339)
117 3gvo_A Pumilio 2, pumilio homo 40.8 77 0.0026 29.5 8.0 166 32-201 68-239 (351)
118 3mkq_B Coatomer subunit alpha; 40.1 1.5E+02 0.005 24.7 8.6 129 2-162 12-140 (177)
119 2iub_A CORA, divalent cation t 29.5 20 0.0007 33.8 1.8 27 357-383 306-336 (363)
120 1gp8_A Protein (scaffolding pr 23.0 58 0.002 19.5 2.2 16 75-90 17-32 (40)
121 2jwa_A Receptor tyrosine-prote 22.0 1.1E+02 0.0037 19.0 3.5 7 395-401 14-20 (44)
122 4aq5_B Acetylcholine receptor 21.7 4.1E+02 0.014 25.9 9.7 30 353-382 270-299 (493)
No 1
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.5e-38 Score=289.16 Aligned_cols=222 Identities=21% Similarity=0.232 Sum_probs=203.8
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .+.++.+++.++.. .+..|..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+.
T Consensus 9 ~l~~A~~~g~-~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 9 MICNLAYSGK-LDELKERILADKSL----ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp HHHHHHHHTC-HHHHHHHHHHCGGG----GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHH
T ss_pred hHHHHHHhCC-HHHHHHHHHhchhh----hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHH
Confidence 5899999999 99999999987653 455668899999999999999999999999987 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++.++ +.+|..|.||||+|+..|+ .+++++|++.+ .+++..|..|.||||+|+..|+.+++++|+
T Consensus 83 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNR-HEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999998 6889999999999999999 99999999984 557888999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGL 240 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~ 240 (444)
+ .+.+++.+|.+|+||||+|+..++.+++++|+++|++ ++.+|..|+||+++|... ...++.+
T Consensus 160 ~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~l~~A~~~----~~~~i~~ 222 (231)
T 3aji_A 160 F------YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-------IYIENKEEKTPLQVAKGG----LGLILKR 222 (231)
T ss_dssp H------TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------SCCCCTTSCCHHHHSCHH----HHHHHHH
T ss_pred h------cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-------CCCCCCCCCCHHHHHHhh----HHHHHHH
Confidence 9 5567788999999999999999999999999999887 899999999999999765 4788999
Q ss_pred HHHHcCCC
Q 013369 241 ILQEASAR 248 (444)
Q Consensus 241 ~L~~~ga~ 248 (444)
+|.+.|+.
T Consensus 223 lL~~~~a~ 230 (231)
T 3aji_A 223 LAEGEEAS 230 (231)
T ss_dssp HHHHHHHC
T ss_pred HHcccccc
Confidence 99888764
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.8e-38 Score=292.93 Aligned_cols=222 Identities=18% Similarity=0.170 Sum_probs=178.9
Q ss_pred ChhHHhhcC-------------CcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccc
Q 013369 1 MFEEALRKD-------------DHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIK 67 (444)
Q Consensus 1 ~L~~A~~~g-------------~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 67 (444)
|||.|+..| + .++++.|++.++++. ...|..|.||||+|+..|+.+++++|++.+++ ++..
T Consensus 13 pL~~A~~~g~~~~~~~~~~~~~~-~~~v~~Ll~~g~~~~----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~ 86 (253)
T 1yyh_A 13 PLMIASCSGGGLETGNSEEEEDA-PAVISDFIYQGASLH----NQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQ 86 (253)
T ss_dssp --------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred HHHHHHhccccccccchhhcCCC-hHHHHHHHHccCCcc----cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCC
Confidence 799999987 8 999999999988753 33467899999999999999999999999988 6789
Q ss_pred cCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHH
Q 013369 68 NQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLA 147 (444)
Q Consensus 68 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 147 (444)
|..|+||||+|+..|+.+++++|+++++...+..+..|.||||+|+..|+ .+++++|++. +.+++..|..|+||||+|
T Consensus 87 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV-EGMLEDLINS-HADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC-SSHHHHHHHT-TCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh-HHHHHHHHHc-CCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999999999985558899999999999999999 9999999997 456888999999999999
Q ss_pred HHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHH
Q 013369 148 VKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCK 227 (444)
Q Consensus 148 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~ 227 (444)
+..|+.+++++|++ .+.+++.+|..|+||||+|++.++.+++++|+++|++ ++.+|..|+||+++|+
T Consensus 165 ~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-------~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 165 AAVNNVDAAVVLLK------NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN-------RDITDHMDRLPRDIAQ 231 (253)
T ss_dssp HHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCCHHHHHH
T ss_pred HHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-------ccccccCCCCHHHHHH
Confidence 99999999999999 5566788999999999999999999999999999887 8999999999999999
Q ss_pred HcCCchhHHHHHHHHHHcCC
Q 013369 228 ANSEDSVFKEIGLILQEASA 247 (444)
Q Consensus 228 ~~~~~~~~~~i~~~L~~~ga 247 (444)
+.+ ..+++++|.....
T Consensus 232 ~~g----~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 232 ERM----HHDIVRLLDLEHH 247 (253)
T ss_dssp HTT----CHHHHHHHHC---
T ss_pred HcC----CHHHHHHHHHHhh
Confidence 987 7788888875543
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.1e-37 Score=283.98 Aligned_cols=222 Identities=22% Similarity=0.288 Sum_probs=200.6
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++++.|++.+.+++ ..|..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+.
T Consensus 14 ~L~~A~~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 14 PLHAAAEAGH-VDICHMLVQAGANID-----TCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAK 86 (237)
T ss_dssp HHHHHHHHTC-HHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCc-HHHHHHHHHcCCCcC-----ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHH
Confidence 6899999999 999999999988753 3457799999999999999999999999987 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|+++++...+..|..|.||||+|+..|+ .+++++|++.+ .+++..|..|.||||+|+..|+.+++++|+
T Consensus 87 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH-VDLVKLLLSKG-SDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC-HHHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999999955557899999999999999999 99999999985 457888999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGL 240 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~ 240 (444)
+ .+.+++.+|..|+||||+|++.++.+++++|+++|++ ++.+|++|+||+|+|+..++.....++.+
T Consensus 165 ~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-------~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 165 A------AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD-------VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp T------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-------TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred H------cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC-------CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8 5567788999999999999999999999999999887 89999999999999998875555566666
Q ss_pred HHHH
Q 013369 241 ILQE 244 (444)
Q Consensus 241 ~L~~ 244 (444)
.|++
T Consensus 232 ~l~d 235 (237)
T 3b7b_A 232 ALQD 235 (237)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 6654
No 4
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=289.56 Aligned_cols=218 Identities=18% Similarity=0.215 Sum_probs=195.5
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++++.|++.+.+++ ..|..|.||||+|+..|+.+++++|++.+++ ++..|.+|.||||+|+.
T Consensus 6 ~L~~A~~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 6 PMHEAAIHGH-QLSLRNLISQGWAVN-----IITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACV 78 (261)
T ss_dssp HHHHHHHHTC-HHHHHHHHHTTCCSS-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 6999999999 999999999987753 4557899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++++.. .+.+|.||||+|+..|+ .+++++|++.+ .+++..|..|+||||+|+.+|+.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGH-VECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCc-HHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999999873 45669999999999999 99999999985 558889999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGL 240 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~ 240 (444)
+.|. +++ .|..|+||||+|++.++.+++++|+++|++ ++.+|.+|+||+|+|+..+ ++.+
T Consensus 155 ~~g~------~~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-------~~~~d~~g~tpl~~A~~~~------~~~~ 214 (261)
T 2xai_A 155 ESGA------DVN-QGKGQDSPLHAVARTASEELACLLMDFGAD-------TQAKNAEGKRPVELVPPES------PLAQ 214 (261)
T ss_dssp HHTC------CTT-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCCGGGGSCTTC------THHH
T ss_pred HcCC------CCC-CCCCCCChHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCChhhhccccc------cHHH
Confidence 9654 445 388999999999999999999999999887 9999999999999998543 4777
Q ss_pred HHHHcCCCC
Q 013369 241 ILQEASARS 249 (444)
Q Consensus 241 ~L~~~ga~~ 249 (444)
+|++.+..+
T Consensus 215 ~ll~~~~~~ 223 (261)
T 2xai_A 215 LFLEREGPP 223 (261)
T ss_dssp HHHHC-CCC
T ss_pred HHHhccCCc
Confidence 888876654
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-36 Score=286.83 Aligned_cols=223 Identities=18% Similarity=0.229 Sum_probs=138.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+++++.. .+..|.||||+|+..|+.+++++|++.+++ ++..|.+|.||||+|+.
T Consensus 8 ~L~~A~~~g~-~~~v~~Ll~~g~~~~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 8 LLIKAVQNED-VDLVQQLLEGGANVNFQ----EEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCcccc----cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence 4677777777 77777777777664321 135577777777777777777777777766 45667777777777777
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhcc----------ccCCCCHHHHHHHc
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKL----------TSNQDTALHLAVKN 150 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~----------d~~g~t~Lh~A~~~ 150 (444)
.|+.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++.+.+ ++.. +..|.||||+|+..
T Consensus 82 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGK-VKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCC-HHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHc
Confidence 77777777777777666 5666777777777777777 7777777766433 3332 55666777777777
Q ss_pred CCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCC----HHHHHHHHhccCCCccccccccccccCCCCHHHHH
Q 013369 151 SHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKS----IEIVKALALESSNSSSIMIRVNTLNKQGQTALEVC 226 (444)
Q Consensus 151 g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~----~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A 226 (444)
|+.+++++|++. .+..++..|..|+||||+|+..++ .+++++|+++|++ ++.+|..|.||||+|
T Consensus 159 ~~~~~v~~Ll~~-----~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-------~~~~~~~g~t~L~~A 226 (285)
T 1wdy_A 159 GHVEVLKILLDE-----MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-------VNVRGERGKTPLILA 226 (285)
T ss_dssp TCHHHHHHHHHT-----SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-------SSCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHHh-----cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-------CCCcCCCCCcHHHHH
Confidence 777777777663 133444455555555555555554 4555555555444 444555555555555
Q ss_pred HHcCCchhHHHHHHHHHH-cCCC
Q 013369 227 KANSEDSVFKEIGLILQE-ASAR 248 (444)
Q Consensus 227 ~~~~~~~~~~~i~~~L~~-~ga~ 248 (444)
+..+ ..++++.|++ .|++
T Consensus 227 ~~~~----~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 227 VEKK----HLGLVQRLLEQEHIE 245 (285)
T ss_dssp HHTT----CHHHHHHHHHSSSCC
T ss_pred HHcC----CHHHHHHHHhccCCC
Confidence 4443 3344444444 3443
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=295.43 Aligned_cols=228 Identities=23% Similarity=0.318 Sum_probs=169.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCch---HHhhhcCCCCChHHHHHHhcCCH-HHHHHHHhhCCcccccccCCCChHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSD---DVIRASSSSENNPLLTACEYGNH-QVAKEIASRWPKLAMIKNQHGQTAVH 76 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~---~~~~~~d~~g~t~Lh~Aa~~g~~-~~v~~Ll~~~~~~~~~~d~~G~tpLh 76 (444)
+|+.||+.|+ .++|+.||+.+.+... ...+..|..+.||||.|+..++. ++++.|++.|.+ ++.+|.+|+||||
T Consensus 14 ~L~~A~~~G~-~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~G~TpLh 91 (269)
T 4b93_B 14 KLLRAVADGD-LEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHTTC-HHHHHHHHTCC----------------------------------------CCCC-TTCCCTTSCCHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCCCCCHHH
Confidence 5899999999 9999999998765322 22445567799999999998876 488999999988 7889999999999
Q ss_pred HHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHH
Q 013369 77 TVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAF 156 (444)
Q Consensus 77 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv 156 (444)
+|+..|+.+++++|++.++++ +.++.+|.||+|.|+..++ .++++.|++.+ .+++.+|..|+||||+|+.+|+.+++
T Consensus 92 ~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 92 VAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGH-FQVVKCLLDSN-AKPNKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC-HHHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccCh-HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999999999998 6889999999999999999 99999999984 55888999999999999999999999
Q ss_pred HHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHH
Q 013369 157 QVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFK 236 (444)
Q Consensus 157 ~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~ 236 (444)
++|++ .+.++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|++|+||||+|++++ ...
T Consensus 169 ~~Ll~------~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad-------~~~~d~~G~TpL~~A~~~~---~i~ 232 (269)
T 4b93_B 169 ALLLQ------HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS-------VQVLNKRQRTAVDCAEQNS---KIM 232 (269)
T ss_dssp HHHHH------TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-------SCCCCTTSCCSGGGSCTTC---HHH
T ss_pred HHHHH------CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCCHHHHHHhCC---cHH
Confidence 99999 5667888999999999999999999999999999887 9999999999999998664 234
Q ss_pred HHHHHHHHcCCCC
Q 013369 237 EIGLILQEASARS 249 (444)
Q Consensus 237 ~i~~~L~~~ga~~ 249 (444)
++.+.+...++..
T Consensus 233 ~lL~~l~~~~~~~ 245 (269)
T 4b93_B 233 ELLQVVPSCVASL 245 (269)
T ss_dssp HHTTC--------
T ss_pred HHHHHHHHhchhh
Confidence 4555555555443
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.8e-37 Score=279.85 Aligned_cols=209 Identities=20% Similarity=0.245 Sum_probs=189.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhC--CcccccccCCCChHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRW--PKLAMIKNQHGQTAVHTV 78 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~G~tpLh~A 78 (444)
|||.|++.|+ .++++.|++.+++. ....|..|.||||+|+..|+.+++++|++.+ ++.....|..|.||||+|
T Consensus 5 ~L~~A~~~g~-~~~v~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 5 PLHQACMENE-FFKVQELLHSKPSL----LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp HHHHHHHTTC-HHHHHHHHHHCGGG----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhCC-HHHHHHHHhcCccc----cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 6999999999 99999999998764 3335678999999999999999999999999 564434889999999999
Q ss_pred HHCCCHHHHHHHhhcC--CCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHH
Q 013369 79 AERGDVEMVQFLGKQN--PESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAF 156 (444)
Q Consensus 79 a~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv 156 (444)
+..|+.+++++|++++ .+. +..|..|.||||+|+..|+ .+++++|++. +.+++..|..|+||||+|+..|+.+++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v 156 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKW-FEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLI 156 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTC-HHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCC-HhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999998 666 6889999999999999999 9999999998 556888999999999999999999999
Q ss_pred HHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHH-hccCCCccccccccccccCCCCHHHHHHHc
Q 013369 157 QVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALA-LESSNSSSIMIRVNTLNKQGQTALEVCKAN 229 (444)
Q Consensus 157 ~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll-~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~ 229 (444)
++|++.| ..+++.+|.+|+||||+|+..++.+++++|+ +.|++ ++.+|.+|+||+++|...
T Consensus 157 ~~Ll~~g-----~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-------~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 157 ELLCGLG-----KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE-------YDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHTTT-----CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC-------SCCBCTTSCBGGGGCSST
T ss_pred HHHHhcC-----cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC-------CCccCCCCCcHHHHHHHH
Confidence 9999843 1678889999999999999999999999999 88777 999999999999999643
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.9e-37 Score=288.66 Aligned_cols=211 Identities=17% Similarity=0.156 Sum_probs=177.6
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+++.. ..+.+|..|.||||+|+..|+.+++++|++++++ ++..|..|.||||+|+.
T Consensus 12 ~L~~A~~~g~-~~~v~~Ll~~g~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 12 ALHLAVIHQH-EPFLDFLLGFSAGHE--YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTALHLACR 87 (282)
T ss_dssp HHHHHHHTTC-HHHHHHHHHHHTTSG--GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCCHHHHHTT
T ss_pred HHHHHHHcCC-HHHHHHHHhcCCCcc--cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 6999999999 999999999877632 2455678899999999999999999999999988 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCC----------------------------------------------ccccCCCCCCHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPES----------------------------------------------CLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~----------------------------------------------~~~~d~~g~tpLh~Aa~ 114 (444)
.|+.+++++|++++++. .+.+|..|.||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 99999999999987652 24678899999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhcccc-CCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTS-NQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIE 193 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 193 (444)
.|+ .+++++|++.+. +++..+. .|+||||+|+.+|+.+++++|++ .+.+++.+|..|+||||+|++.++.+
T Consensus 168 ~g~-~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 168 HKD-AEMVRLLRDAGA-DLNKPEPTCGRTPLHLAVEAQAASVLELLLK------AGADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp TTC-HHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred cCC-HHHHHHHHHcCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCHHHHHHHcCCcH
Confidence 999 999999999864 4666664 59999999999999999999999 56678889999999999999999999
Q ss_pred HHHHHHhccCCCccccccccccccCCCCHHHHHHHcC
Q 013369 194 IVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANS 230 (444)
Q Consensus 194 iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~ 230 (444)
++++|+++|++ ++.+|..|.||+++|....
T Consensus 240 ~v~~Ll~~ga~-------~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 240 LARLLRAHGAP-------EPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHTTCC-------CCCCC--------------
T ss_pred HHHHHHHcCCC-------cCcCCCcccccccccCCcc
Confidence 99999999888 9999999999999997654
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.1e-37 Score=282.91 Aligned_cols=220 Identities=19% Similarity=0.194 Sum_probs=184.9
Q ss_pred ChhHHhhcCCcHHHHHHHHh----cCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLS----KIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVH 76 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~----~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh 76 (444)
|||.|++.|+ .++++.|++ .+.++ +..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||
T Consensus 12 ~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 12 PLHIAVVQGN-LPAVHRLVNLFQQGGREL-----DIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAH 84 (241)
T ss_dssp HHHHHHHTTC-HHHHHHHHHHHHHTTCCS-----CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHHHHhcCCCC-----CcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHH
Confidence 6899999999 999999997 34443 33457799999999999999999999999887 5678899999999
Q ss_pred HHHHCCCHHHHHHHhhcCC----CCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccc-cCCCCHHHHHHHcC
Q 013369 77 TVAERGDVEMVQFLGKQNP----ESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLT-SNQDTALHLAVKNS 151 (444)
Q Consensus 77 ~Aa~~g~~~~v~~Ll~~~~----~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~g 151 (444)
+|+..|+.+++++|++.++ +. +..|..|.||||+|+..|+ .+++++|++.+.+ ++..+ ..|.||||+|+.+|
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTEC-QETVQLLLERGAD-IDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCC-HHHHHHHHHcCCC-cccccccCCCcHHHHHHHcC
Confidence 9999999999999999987 44 6788899999999999999 9999999998544 56666 78999999999999
Q ss_pred CHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCC
Q 013369 152 HLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSE 231 (444)
Q Consensus 152 ~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~ 231 (444)
+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++++|+++|++ ++.+|..|+||+++|+..+
T Consensus 162 ~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~tpl~~A~~~~- 227 (241)
T 1k1a_A 162 SLSMVQLLLQ------HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD-------SSLKNCHNDTPLMVARSRR- 227 (241)
T ss_dssp CHHHHHHHHH------TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCCTTTTCSSHH-
T ss_pred CHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-------CCCcCCCCCCHHHHHHhcC-
Confidence 9999999998 4566788899999999999999999999999999887 8899999999999997664
Q ss_pred chhHHHHHHHHHHcCC
Q 013369 232 DSVFKEIGLILQEASA 247 (444)
Q Consensus 232 ~~~~~~i~~~L~~~ga 247 (444)
..++++.|.+.++
T Consensus 228 ---~~~i~~~l~~~~a 240 (241)
T 1k1a_A 228 ---VIDILRGKATRPA 240 (241)
T ss_dssp ---HHHHHTC------
T ss_pred ---cHHHHhhhccCCC
Confidence 7777777765543
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=288.27 Aligned_cols=219 Identities=18% Similarity=0.221 Sum_probs=192.6
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|+..|+ .++|+.|++.+.+++ .+|..|.||||+|+..|+.+++++|++.+++ ++..|.+|.||||+|+.
T Consensus 62 ~L~~Aa~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 62 PMHEAAIHGH-QLSLRNLISQGWAVN-----IITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACV 134 (285)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCSC-----EECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCCCC-----CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 6899999999 999999999987753 4567899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++.++. .+.+|.||||+|+..|+ .+++++|++.+ .+++..|..|+||||+|+.+|+.+++++|+
T Consensus 135 ~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 210 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGH-VECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLL 210 (285)
T ss_dssp HTCHHHHHHHHHTTCCSS--CSCTTSCHHHHHHHHTC-HHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCC-HHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 999999999999998873 34559999999999999 99999999985 458888999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGL 240 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~ 240 (444)
+.| .+++ .|..|+||||+|++.++.+++++|+++|++ ++.+|.+|+|||++|+.. .++++
T Consensus 211 ~~g------a~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-------~~~~d~~g~t~l~~A~~~------~~~~~ 270 (285)
T 3d9h_A 211 ESG------ADVN-QGKGQDSPLHAVVRTASEELACLLMDFGAD-------TQAKNAEGKRPVELVPPE------SPLAQ 270 (285)
T ss_dssp HTT------CCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCGGGGSCTT------SHHHH
T ss_pred HCC------CCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCCHHHHhcCc------cHHHH
Confidence 954 4455 488999999999999999999999999887 999999999999999843 36788
Q ss_pred HHHHc-CCCCC
Q 013369 241 ILQEA-SARSP 250 (444)
Q Consensus 241 ~L~~~-ga~~~ 250 (444)
+|++. |++..
T Consensus 271 ~Ll~~~~a~l~ 281 (285)
T 3d9h_A 271 LFLEREGASLP 281 (285)
T ss_dssp HHHHHC-----
T ss_pred HHHHhhccCCC
Confidence 88887 55543
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.4e-36 Score=276.93 Aligned_cols=218 Identities=18% Similarity=0.195 Sum_probs=196.9
Q ss_pred CCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHH
Q 013369 9 DDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQ 88 (444)
Q Consensus 9 g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~ 88 (444)
|+ .++++.|++.++++.. ..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.++++
T Consensus 2 g~-~~~i~~Ll~~g~~~~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~ 75 (223)
T 2f8y_A 2 DA-PAVISDFIYQGASLHN----QTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQ 75 (223)
T ss_dssp ----CCEETTEETTCCTTC----CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred Cc-HHHHHHHHHcCCCccc----ccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 56 8899999999887542 3357899999999999999999999999988 6789999999999999999999999
Q ss_pred HHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccc
Q 013369 89 FLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNK 168 (444)
Q Consensus 89 ~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~ 168 (444)
+|+++++...+..+..|.||||+|+..|+ .+++++|++.+ .+++..|..|+||||+|+..|+.+++++|++ .
T Consensus 76 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ 147 (223)
T 2f8y_A 76 ILIRNRATDLDARMHDGTTPLILAARLAV-EGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLK------N 147 (223)
T ss_dssp HHHHBTTSCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH------T
T ss_pred HHHHcCCCCcccCCCCCCcHHHHHHHhCc-HHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH------c
Confidence 99999986668899999999999999999 99999999974 5588889999999999999999999999999 5
Q ss_pred cccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCC
Q 013369 169 EHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASAR 248 (444)
Q Consensus 169 ~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~ 248 (444)
+.+++.+|..|+||||+|++.++.+++++|+++|++ ++.+|..|.||+++|+..+ ..+++++|.+.|+.
T Consensus 148 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~l~~A~~~~----~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 148 GANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN-------RDITDHMDRLPRDIAQERM----HHDIVRLLDEYNLV 216 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCCHHHHHHHTT----CHHHHHHHHHTTCS
T ss_pred CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-------CccccccCCCHHHHHHHhc----chHHHHHHHHcCCC
Confidence 567788999999999999999999999999999887 8999999999999999886 77899999999997
Q ss_pred CCC
Q 013369 249 SPV 251 (444)
Q Consensus 249 ~~~ 251 (444)
...
T Consensus 217 ~~~ 219 (223)
T 2f8y_A 217 RSP 219 (223)
T ss_dssp SCC
T ss_pred ccc
Confidence 654
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=285.92 Aligned_cols=236 Identities=18% Similarity=0.164 Sum_probs=187.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCC------chHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKL------SDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTA 74 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~------~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tp 74 (444)
+||.|++.|+ .+.+..++..++.. .......+|..|.||||+|+..|+.+++++|++.+.+ ++.+|.+|.||
T Consensus 18 ~lH~Aa~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 95 (285)
T 3d9h_A 18 GSHMASMDGK-QGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSP 95 (285)
T ss_dssp -------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCH
T ss_pred HHHHHhhcCC-CCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCH
Confidence 5899999999 88888877765431 1223455778899999999999999999999999988 67899999999
Q ss_pred HHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHH
Q 013369 75 VHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLE 154 (444)
Q Consensus 75 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~ 154 (444)
||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+ .+++++|++.+.+ ++. +.+|.||||+|+..|+.+
T Consensus 96 L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~g~~~ 171 (285)
T 3d9h_A 96 LHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGS-WDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVE 171 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTCC-SSC-SCTTSCHHHHHHHHTCHH
T ss_pred HHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCH-HHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999988 7899999999999999999 9999999998654 333 456999999999999999
Q ss_pred HHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchh
Q 013369 155 AFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSV 234 (444)
Q Consensus 155 iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~ 234 (444)
++++|++ .+..++.+|.+|+||||+|+..++.+++++|++.|++ ++ .|..|.||||+|+..+
T Consensus 172 ~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~-~~~~g~t~L~~A~~~~---- 233 (285)
T 3d9h_A 172 CVNSLIA------YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-------VN-QGKGQDSPLHAVVRTA---- 233 (285)
T ss_dssp HHHHHHH------TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-------TT-CCBTTBCHHHHHHHTT----
T ss_pred HHHHHHH------CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-------CC-CCCCCCCHHHHHHHcC----
Confidence 9999999 5567788999999999999999999999999999887 66 4899999999999886
Q ss_pred HHHHHHHHHHcCCCCCC----CCCCccccc
Q 013369 235 FKEIGLILQEASARSPV----QQSPQIAVG 260 (444)
Q Consensus 235 ~~~i~~~L~~~ga~~~~----~~~p~~~~~ 260 (444)
..+++++|++.|++.+. +.+|.....
T Consensus 234 ~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 234 SEELACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 67899999999998654 567766543
No 13
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.6e-36 Score=297.68 Aligned_cols=226 Identities=19% Similarity=0.189 Sum_probs=203.3
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+.++ +..|..|.||||+|+..|+.+++++|++.+++ ..+.+|.||||+|+.
T Consensus 23 ~L~~Aa~~g~-~~~v~~Ll~~g~~~-----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~g~t~L~~A~~ 93 (364)
T 3ljn_A 23 KIHVAARKGQ-TDEVRRLIETGVSP-----TIQNRFGCTALHLACKFGCVDTAKYLASVGEV---HSLWHGQKPIHLAVM 93 (364)
T ss_dssp HHHHHHHHTC-HHHHHHHHHTTCCT-----TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC---CCCBTTBCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---ccccCCCCHHHHHHH
Confidence 6999999999 99999999998775 34567899999999999999999999999985 344689999999999
Q ss_pred CCCHHHHHHHhhc----CCCCccc-----------------cCCCCCCHHHHHHHcC--CcHHHHHHHHHhCcchhhccc
Q 013369 81 RGDVEMVQFLGKQ----NPESCLV-----------------EDNLSMIPLHRAAMNG--QSVDVIRALVSICPESLEKLT 137 (444)
Q Consensus 81 ~g~~~~v~~Ll~~----~~~~~~~-----------------~d~~g~tpLh~Aa~~g--~~~~~v~~Ll~~~~~~~~~~d 137 (444)
.|+.+++++|++. +.++ +. .|..|.||||+|+..| + .+++++|++. +.+++..|
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~~~v~~Ll~~-ga~~~~~d 170 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEY-LEMIKILVQL-GASPTAKD 170 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGG-HHHHHHHHHH-TCCTTCCC
T ss_pred cCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCch-HHHHHHHHHc-CCCCcccC
Confidence 9999999999998 6655 33 7889999999999999 9 9999999999 56688999
Q ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCcccccccccccc
Q 013369 138 SNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNK 217 (444)
Q Consensus 138 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~ 217 (444)
..|+||||+|+.+|+.+++++|++.|.+. .+..++..|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-------~~~~d~ 242 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID-------VNMEDN 242 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC-------TTCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCC
Confidence 99999999999999999999999976542 3344889999999999999999999999999999887 999999
Q ss_pred CCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCC
Q 013369 218 QGQTALEVCKANSEDSVFKEIGLILQEASARSP 250 (444)
Q Consensus 218 ~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 250 (444)
.|.|||++|+..+ ..+++++|++.|+...
T Consensus 243 ~g~tpL~~A~~~g----~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 243 EHTVPLYLSVRAA----MVLLTKELLQKTDVFL 271 (364)
T ss_dssp TSCCHHHHHHHTC----CHHHHHHHHHHSCHHH
T ss_pred CCCCHHHHHHHhC----hHHHHHHHHHcCCchh
Confidence 9999999999987 7789999999987653
No 14
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.6e-36 Score=290.19 Aligned_cols=229 Identities=22% Similarity=0.230 Sum_probs=196.1
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcc-----------------
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKL----------------- 63 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~----------------- 63 (444)
+||.||++|| .|+|+.||+.+.+++.. .+..|.||||+|+..|+.++|++|+++|++.
T Consensus 28 ~L~~Av~~g~-~~~V~~LL~~Gadvn~~----~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 28 LLIKAVQNED-VDLVQQLLEGGANVNFQ----EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHTTC-HHHHHHHHHHTCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCCCCcc----CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 5899999999 99999999999886432 1245999999999999999999999987642
Q ss_pred ---------------cccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCc---------cccCCCCCCHHHHHHHcCCcH
Q 013369 64 ---------------AMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESC---------LVEDNLSMIPLHRAAMNGQSV 119 (444)
Q Consensus 64 ---------------~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~---------~~~d~~g~tpLh~Aa~~g~~~ 119 (444)
++..|..|.||||+|+..|+.+++++|+++++++. ...+..|.||||+|+..|+ .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~-~ 181 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH-V 181 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC-H
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC-H
Confidence 34678889999999999999999999999988763 2345678999999999999 9
Q ss_pred HHHHHHHHhCcchhhccccCCCCHHHHHHHcCC----HHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHH
Q 013369 120 DVIRALVSICPESLEKLTSNQDTALHLAVKNSH----LEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIV 195 (444)
Q Consensus 120 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv 195 (444)
+++++|+++.+.+++..|..|+|++|.++..++ .+++++|++ .+.++|.+|.+|+||||+|++.++.+++
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~------~gad~n~~d~~g~t~L~~a~~~~~~~~v 255 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD------HGADVNVRGERGKTPLILAVEKKHLGLV 255 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHH------TTCCTTCCCGGGCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHHhhhhHHH
Confidence 999999988778889999999999998876543 467888888 5667788999999999999999999999
Q ss_pred HHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 196 KALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 196 ~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
+.|++. .+++++.+|.+|+||||+|++.+ ..+++++|+++|++.+.
T Consensus 256 ~~Ll~~------~~~~vn~~d~~G~TpL~~A~~~g----~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 256 QRLLEQ------EHIEINDTDSDGKTALLLAVELK----LKKIAELLCKRGASTDC 301 (337)
T ss_dssp HHHHTS------TTCCTTCBCTTSCBHHHHHHHTT----CHHHHHHHHTTSCSSTT
T ss_pred HHHHHh------cCCcccCcCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCC
Confidence 999986 23349999999999999999887 67899999999998764
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=8.2e-36 Score=289.91 Aligned_cols=225 Identities=24% Similarity=0.290 Sum_probs=200.7
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
+||.|++.|+ .+.|+.++..... ..+.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 27 ~L~~A~~~g~-~~~v~~ll~~~~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 27 ELLEAARSGN-EEKLMALLTPLNV----NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHTC-HHHHHHHCCTTTT----TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred hHHHHHHcCC-HHHHHHHHHhcCC----CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHH
Confidence 5899999999 9999999986322 1344567899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhc-------------------------
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEK------------------------- 135 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~------------------------- 135 (444)
.|+.+++++|+++++++ +..|..|.||||+|+..|+ .+++++|++++.+ ++.
T Consensus 101 ~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~-~~~~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 101 YGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNR-VEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCC-CccccCCCCcchHHHhhhhhHHHHHhhh
Confidence 99999999999999998 6889999999999999999 9999999997543 222
Q ss_pred -----------------------------cccCCCCHHHHHHHc---CCHHHHHHHHHhcccccccccccccCCCCCcHH
Q 013369 136 -----------------------------LTSNQDTALHLAVKN---SHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVL 183 (444)
Q Consensus 136 -----------------------------~d~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~L 183 (444)
.+..|.||||+|+.. +..+++++|++ .+.+++.+|.+|+|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L 251 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR------KGANVNEKNKDFMTPL 251 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH------TTCCTTCCCTTCCCHH
T ss_pred cccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH------cCCCcCCcCCCCCCHH
Confidence 346688999999999 56899999999 5667888999999999
Q ss_pred HHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 184 HLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 184 h~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
|+|++.|+.+++++|+++|++ ++.+|..|+||||+|+..+ ..+++++|++.|++++.
T Consensus 252 ~~A~~~g~~~~v~~Ll~~ga~-------~n~~d~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 252 HVAAERAHNDVMEVLHKHGAK-------MNALDSLGQTALHRAALAG----HLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHT----CHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCCHHHHHHHcC----cHHHHHHHHHcCCCCCC
Confidence 999999999999999999887 9999999999999999886 77899999999998764
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3e-36 Score=284.28 Aligned_cols=213 Identities=21% Similarity=0.187 Sum_probs=183.1
Q ss_pred hhcCCCCChHHHHHHhcCCHHHHHHHHhhCCc--ccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCH
Q 013369 31 RASSSSENNPLLTACEYGNHQVAKEIASRWPK--LAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIP 108 (444)
Q Consensus 31 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~--~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 108 (444)
+..|.+|.||||+|+..|+.+++++|++.+++ .++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tp 81 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTA 81 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 34678899999999999999999999998875 36788999999999999999999999999999998 6889999999
Q ss_pred HHHHHHcCCcHHHHHHHHHhCcc----------------------------------------------hhhccccCCCC
Q 013369 109 LHRAAMNGQSVDVIRALVSICPE----------------------------------------------SLEKLTSNQDT 142 (444)
Q Consensus 109 Lh~Aa~~g~~~~~v~~Ll~~~~~----------------------------------------------~~~~~d~~g~t 142 (444)
||+|+..|+ .+++++|++.++. .++..|..|.|
T Consensus 82 L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 82 LHLACRVRA-HTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHTTTTC-HHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHcCC-cchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 999999999 9999999987543 25667889999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcccccccccccccCC-CCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCC
Q 013369 143 ALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNE-DGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQT 221 (444)
Q Consensus 143 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T 221 (444)
|||+|+..|+.+++++|++. +..++..|. .|+||||+|++.++.+++++|+++|++ ++.+|..|+|
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-------~~~~d~~g~t 227 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-------PTARMYGGRT 227 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC
T ss_pred HHHHHHHcCCHHHHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-------CcccccCCCC
Confidence 99999999999999999994 456677775 499999999999999999999999887 9999999999
Q ss_pred HHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccccccc
Q 013369 222 ALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIAVGTT 262 (444)
Q Consensus 222 ~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~~~~~ 262 (444)
|||+|+..+ ..+++++|+++|++.+. +.+|.......
T Consensus 228 pL~~A~~~~----~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 228 PLGSALLRP----NPILARLLRAHGAPEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp HHHHHHTSS----CHHHHHHHHHTTCCCCCCC-------------
T ss_pred HHHHHHHcC----CcHHHHHHHHcCCCcCcCCCcccccccccCCc
Confidence 999999886 67899999999998775 67777655443
No 17
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-35 Score=277.92 Aligned_cols=225 Identities=24% Similarity=0.239 Sum_probs=208.6
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++++.|++.+.++. .+|..|.||||+|+..|+.+++++|++++++ ++..|..|.||||+|+.
T Consensus 42 ~L~~A~~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 42 PLHNAVQMSR-EDIVELLLRHGADPV-----LRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAV 114 (285)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHH
Confidence 6899999999 999999999988753 3457899999999999999999999999988 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCcccc----------CCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHc
Q 013369 81 RGDVEMVQFLGKQNPESCLVE----------DNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKN 150 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~----------d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 150 (444)
.|+.+++++|++++.++ +.. +..|.||||.|+..|+ .+++++|++..+.+++..|..|+||||+|+..
T Consensus 115 ~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGH-VEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTC-HHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred hCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHcCC-HHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999999887 344 7889999999999999 99999999998888999999999999999999
Q ss_pred CC----HHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHh-ccCCCccccccccccccCCCCHHHH
Q 013369 151 SH----LEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALAL-ESSNSSSIMIRVNTLNKQGQTALEV 225 (444)
Q Consensus 151 g~----~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~-~ga~~~~~~v~~~~~n~~G~T~L~~ 225 (444)
++ .+++++|++ .+.+++.+|..|+||||+|++.++.+++++|++ .|++ ++.+|..|+||||+
T Consensus 193 ~~~~~~~~i~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-------~~~~~~~g~t~l~~ 259 (285)
T 1wdy_A 193 SDDSDVEAITHLLLD------HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-------INDTDSDGKTALLL 259 (285)
T ss_dssp SCTTTHHHHHHHHHH------TTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC-------TTCCCTTSCCHHHH
T ss_pred cccchHHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC-------ccccCCCCCcHHHH
Confidence 99 999999998 677899999999999999999999999999999 6665 99999999999999
Q ss_pred HHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 226 CKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 226 A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
|++.+ ..+++++|+++|++.+.
T Consensus 260 A~~~~----~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 260 AVELK----LKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHTT----CHHHHHHHHHHSSCSCC
T ss_pred HHHcC----cHHHHHHHHHcCCCCCc
Confidence 99886 77899999999998765
No 18
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=272.63 Aligned_cols=224 Identities=19% Similarity=0.189 Sum_probs=200.4
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
+||.|++.|+ .++++.|++.+.++. ..|..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|+.
T Consensus 12 ~l~~A~~~g~-~~~~~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 12 DIVKATQYGI-YERCRELVEAGYDVR-----QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp CHHHHHHTTC-HHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred HHHHHHHcCC-hHHHHHHHHcCCCcC-----CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 6899999999 999999999987753 3457899999999999999999999999998776777779999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCC-HHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSH-LEAFQVL 159 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~iv~~L 159 (444)
.|+.+++++|++.+.++ +..|..|.||||.|+..|+ .+++++|++.+ .+++..+..|.||||+|+..++ .+++++|
T Consensus 86 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGH-TSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred cCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCH-HHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 99999999999999988 6889999999999999999 99999999984 4588889999999999997666 8999999
Q ss_pred HHhcccccccccccccCC-CCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHH
Q 013369 160 VKVSKIHNKEHVFNWKNE-DGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEI 238 (444)
Q Consensus 160 l~~~~~~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i 238 (444)
++ .+..++..+. .|+||||+|+..++.+++++|+++|++ ++.+|..|.||+++|++.+ ..++
T Consensus 163 ~~------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~l~~A~~~~----~~~~ 225 (240)
T 3eu9_A 163 LT------FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-------VDAQNIKGESALDLAKQRK----NVWM 225 (240)
T ss_dssp HH------TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-------TTCBCTTSCBHHHHHHHTT----CHHH
T ss_pred Hh------cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHcC----cHHH
Confidence 98 5556777786 999999999999999999999999887 8999999999999999886 7789
Q ss_pred HHHHHHcCCCCC
Q 013369 239 GLILQEASARSP 250 (444)
Q Consensus 239 ~~~L~~~ga~~~ 250 (444)
+++|.+.++..+
T Consensus 226 v~~L~~~~~~~~ 237 (240)
T 3eu9_A 226 INHLQEARQAKG 237 (240)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHhhhccC
Confidence 999999887654
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-36 Score=288.82 Aligned_cols=221 Identities=21% Similarity=0.257 Sum_probs=194.4
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.||..|+ .++|+.|++.+.+++ ..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 43 ~l~~A~~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 43 VFLAACSSGD-TEEVLRLLERGADIN-----YANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAAS 115 (299)
T ss_dssp HHHHHHHHTC-HHHHHHHHHHCCCTT-----CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHH
Confidence 5899999999 999999999988753 4557899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhc-------------------------
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEK------------------------- 135 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~------------------------- 135 (444)
.|+.+++++|+++++++ +..|..|.||||+|+..|+ .++++.++...+.+++.
T Consensus 116 ~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAM-EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHH-HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred cCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcch-HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 99999999999999988 6889999999999999999 99999888764443332
Q ss_pred -cccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccc
Q 013369 136 -LTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNT 214 (444)
Q Consensus 136 -~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~ 214 (444)
.+..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad-------~~~ 260 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQ------ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD-------MEA 260 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHT------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTC
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC-------CCC
Confidence 45689999999999999999999998 5567888999999999999999999999999999887 999
Q ss_pred cccCCCCHHHHHHHcCCchhHHHHHHHHHHcCC
Q 013369 215 LNKQGQTALEVCKANSEDSVFKEIGLILQEASA 247 (444)
Q Consensus 215 ~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga 247 (444)
+|..|+||+++|.+. ....+.+++.+...
T Consensus 261 ~d~~g~t~l~~A~~~----~~~~l~~l~~~~~~ 289 (299)
T 1s70_B 261 VNKVGQTAFDVADED----ILGYLEELQKKQNL 289 (299)
T ss_dssp CCTTSCCTTTSCCSG----GGHHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHH----HHHHHHHHHHHHhh
Confidence 999999999999643 35556566555443
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.2e-36 Score=278.65 Aligned_cols=210 Identities=19% Similarity=0.237 Sum_probs=160.8
Q ss_pred hhhcCCCCChHHHHHHhcC-------------CHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCC
Q 013369 30 IRASSSSENNPLLTACEYG-------------NHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPE 96 (444)
Q Consensus 30 ~~~~d~~g~t~Lh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~ 96 (444)
++.+|.+|.||||+|+..| +.++++.|++.+++..+..|.+|+||||+|+..|+.+++++|++++++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3456788999999999988 899999999999997777899999999999999999999999999999
Q ss_pred CccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccC
Q 013369 97 SCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKN 176 (444)
Q Consensus 97 ~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d 176 (444)
+ +..|..|.||||+|+..|+ .+++++|++.++.+++..+..|.||||+|+..|+.+++++|++ .+..++.+|
T Consensus 83 ~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~d 154 (253)
T 1yyh_A 83 A-NIQDNMGRTPLHAAVSADA-QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN------SHADVNAVD 154 (253)
T ss_dssp T-TCCCTTSCCHHHHHHHHTC-HHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH------TTCCTTCBC
T ss_pred C-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH------cCCCCCCcC
Confidence 8 7889999999999999999 9999999999887889999999999999999999999999999 556788899
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----C
Q 013369 177 EDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----Q 252 (444)
Q Consensus 177 ~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~ 252 (444)
.+|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..+ ..+++++|++.|++.+. +
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~tpL~~A~~~~----~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGAN-------KDMQNNREETPLFLAAREG----SYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHT----CHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHCC----CHHHHHHHHHcCCCccccccCC
Confidence 9999999999999999999999999887 8999999999999999886 67899999999998664 4
Q ss_pred CCCccc
Q 013369 253 QSPQIA 258 (444)
Q Consensus 253 ~~p~~~ 258 (444)
.+|...
T Consensus 224 ~tpl~~ 229 (253)
T 1yyh_A 224 RLPRDI 229 (253)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 556554
No 21
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-35 Score=294.76 Aligned_cols=196 Identities=24% Similarity=0.277 Sum_probs=119.8
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..|.||||+|+..|+.+++++|++++.+ .+..+.+|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+.
T Consensus 177 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 254 (437)
T 1n11_A 177 KNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQ 254 (437)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 3445555555555555555555554444 3334444555555555555555555555555444 3445555555555555
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEI 194 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i 194 (444)
.|+ .+++++|++.+ .+.+..|..|+||||+|+..|+.+++++|++ .+..++.+|..|+||||+|+..|+.++
T Consensus 255 ~g~-~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~g~~~~ 326 (437)
T 1n11_A 255 EGH-AEMVALLLSKQ-ANGNLGNKSGLTPLHLVAQEGHVPVADVLIK------HGVMVDATTRMGYTPLHVASHYGNIKL 326 (437)
T ss_dssp TTC-HHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------HTCCTTCCCSSCCCHHHHHHHSSCSHH
T ss_pred CCC-HHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh------CCccCCCCCCCCCCHHHHHHHcCcHHH
Confidence 555 55555555542 2344555556666666666666666666655 345566777778888888888888888
Q ss_pred HHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 195 VKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 195 v~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
+++|+++|++ +|.+|..|.||||+|+..+ ..+++++|+++|++++.
T Consensus 327 v~~Ll~~gad-------~n~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 327 VKFLLQHQAD-------VNAKTKLGYSPLHQAAQQG----HTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHHTTCC-------TTCCCTTSCCHHHHHHHTT----CHHHHHHHHHTTCCSCC
T ss_pred HHHHHhcCCC-------CCCCCCCCCCHHHHHHHCC----hHHHHHHHHHCcCCCCC
Confidence 8888887666 7777888888888887765 56777788888877654
No 22
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.7e-36 Score=295.04 Aligned_cols=223 Identities=22% Similarity=0.251 Sum_probs=198.1
Q ss_pred ChhHHhhcCCcHHHHHHHH--------hcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCC
Q 013369 1 MFEEALRKDDHVDEVKLLL--------SKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQ 72 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll--------~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 72 (444)
|||.|+..|+ .++++.|+ +.+.++ +..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.
T Consensus 128 ~Lh~Aa~~g~-~~~v~~Ll~~~~~~ll~~ga~v-----n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~ 200 (373)
T 2fo1_E 128 VLHWIASNSS-AEKSEDLIVHEAKECIAAGADV-----NAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSER 200 (373)
T ss_dssp HHHHHHCTTC-CSCCTTHHHHHHHHHHHTCCCT-----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCC
T ss_pred HHHHHHHCCC-HHHHHHHHHHHHHHHHhcCCCC-----cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCC
Confidence 6999999999 98888877 566664 34567899999999999999999999999998 678999999
Q ss_pred hHHHHHHHCCCHHHHHHHhhcC---CCCccccCCCCCCHHHHHHHcC---CcHHHHHHHHHhCcchhh--------cccc
Q 013369 73 TAVHTVAERGDVEMVQFLGKQN---PESCLVEDNLSMIPLHRAAMNG---QSVDVIRALVSICPESLE--------KLTS 138 (444)
Q Consensus 73 tpLh~Aa~~g~~~~v~~Ll~~~---~~~~~~~d~~g~tpLh~Aa~~g---~~~~~v~~Ll~~~~~~~~--------~~d~ 138 (444)
||||+|+..|+.+++++|++++ .+. +..|..|.||||+|+..| + .+++++|++.+.+ ++ ..|.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~-~~~v~~Ll~~g~~-~~~~~~~~~~~~d~ 277 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQ-VASAKLLVEKGAK-VDYDGAARKDSEKY 277 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTH-HHHHHHHHHHTCC-SSCCSGGGTSSSSC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcch-HHHHHHHHHCCCC-cccccccccCcccc
Confidence 9999999999999999999987 455 688999999999999998 7 9999999998654 33 3567
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccC
Q 013369 139 NQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQ 218 (444)
Q Consensus 139 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~ 218 (444)
.|+||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~-----~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-------~~~~d~~ 345 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGE-----KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-------VEAVDAT 345 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHH-----SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------SSCCCSS
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHh-----cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------ccCCCCC
Confidence 899999999999999999999984 3477889999999999999999999999999999887 9999999
Q ss_pred CCCHHHHHHHcCCchhHHHHHHHHHHcCCCC
Q 013369 219 GQTALEVCKANSEDSVFKEIGLILQEASARS 249 (444)
Q Consensus 219 G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 249 (444)
|+|||++|+..+ ..+++++|.+.+++.
T Consensus 346 g~t~l~~A~~~g----~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 346 DHTARQLAQANN----HHNIVDIFDRCRPER 372 (373)
T ss_dssp SCCHHHHHHHTT----CHHHHHHHHTTC---
T ss_pred CCCHHHHHHHcC----CHHHHHHHHhcCccc
Confidence 999999999987 788999999988764
No 23
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-34 Score=291.63 Aligned_cols=224 Identities=25% Similarity=0.285 Sum_probs=200.5
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+.+++ ..|..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+.
T Consensus 17 ~L~~Aa~~g~-~~~v~~Ll~~g~~~~-----~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 17 PLHVASFMGH-LPIVKNLLQRGASPN-----VSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp HHHHHHHHTC-HHHHHHHHHTTCCSC-----CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHHHHHHH
T ss_pred HHHHHHHCCC-HHHHHHHHHcCCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHH
Confidence 6999999999 999999999987753 3457799999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|+++++++ +..+..|.||||+|+..|+ .++++.|++.+. ..+..+..|.||||+|+..|+.+++++|+
T Consensus 90 ~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 166 (437)
T 1n11_A 90 IGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGH-VETVLALLEKEA-SQACMTKKGFTPLHVAAKYGKVRVAELLL 166 (437)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCC-CCcCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999988 6889999999999999999 999999999854 46677889999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGL 240 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~ 240 (444)
+ .+..++..|..|.||||+|+..++.+++++|+++|++ ++..+..|.|||++|+..+ ..++++
T Consensus 167 ~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~----~~~~~~ 229 (437)
T 1n11_A 167 E------RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-------PHSPAWNGYTPLHIAAKQN----QVEVAR 229 (437)
T ss_dssp H------TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-------SCCCCTTCCCHHHHHHHTT----CHHHHH
T ss_pred h------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCcCCCCCCHHHHHHHcC----CHHHHH
Confidence 9 4556778899999999999999999999999999877 7788888999999998876 567888
Q ss_pred HHHHcCCCCCC
Q 013369 241 ILQEASARSPV 251 (444)
Q Consensus 241 ~L~~~ga~~~~ 251 (444)
.|++.|++.+.
T Consensus 230 ~Ll~~g~~~~~ 240 (437)
T 1n11_A 230 SLLQYGGSANA 240 (437)
T ss_dssp HHHHTTCCTTC
T ss_pred HHHHcCCCCCC
Confidence 88888876553
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-34 Score=266.31 Aligned_cols=209 Identities=18% Similarity=0.268 Sum_probs=191.2
Q ss_pred hhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHH
Q 013369 31 RASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLH 110 (444)
Q Consensus 31 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 110 (444)
+.+|..|.||||+|+..|+.+++++|++.+.+ ++..|.+|.||||+|+..|+.+++++|++++.++ +.++..|.||||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 82 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLH 82 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHH
Confidence 34567899999999999999999999999988 6788999999999999999999999999999987 688999999999
Q ss_pred HHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcC
Q 013369 111 RAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNK 190 (444)
Q Consensus 111 ~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 190 (444)
+|+..|+ .+++++|++.++.+++..+..|.||||+|+..|+.+++++|++ .+..++.+|..|+||||+|+..+
T Consensus 83 ~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 83 LAAKKGH-YEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS------KGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHTTC-HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCC-HHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCccCCCCCCHHHHHHHCC
Confidence 9999999 9999999999878889999999999999999999999999999 55667889999999999999999
Q ss_pred CHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCcccc
Q 013369 191 SIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIAV 259 (444)
Q Consensus 191 ~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~~ 259 (444)
+.+++++|+++|++ ++.+|..|.||||+|+..+ ..+++++|++.|++.+. +.+|....
T Consensus 156 ~~~~~~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 156 CVDIAEILLAAKCD-------LHAVNIHGDSPLHIAAREN----RYDCVVLFLSRDSDVTLKNKEGETPLQCA 217 (237)
T ss_dssp CHHHHHHHHTTTCC-------TTCCCTTCCCHHHHHHHTT----CHHHHHHHHTTTCCTTCCCTTSCCHHHHS
T ss_pred CHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHhC----CHhHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 99999999999887 8999999999999999886 67899999999998664 55665543
No 25
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-34 Score=281.17 Aligned_cols=219 Identities=22% Similarity=0.260 Sum_probs=193.0
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|+..|+ .++|+.|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 61 ~L~~A~~~g~-~~~v~~Ll~~g~~~-----~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 61 PLHLAAGYNR-VRIVQLLLQHGADV-----HAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAAS 133 (351)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCT-----TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCC-----CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 6999999999 99999999998875 34557899999999999999999999999988 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCcc-----------------------------------------------------ccCCCCCC
Q 013369 81 RGDVEMVQFLGKQNPESCL-----------------------------------------------------VEDNLSMI 107 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~-----------------------------------------------------~~d~~g~t 107 (444)
.|+.+++++|++++.++.. ..+..|.|
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t 213 (351)
T 3utm_A 134 KNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCC
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999887621 23466889
Q ss_pred HHHHHHHc---CCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHH
Q 013369 108 PLHRAAMN---GQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLH 184 (444)
Q Consensus 108 pLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 184 (444)
|||+|+.. +. .+++++|++.+ .+++.+|.+|+||||+|+.+|+.+++++|++ .+.++|.+|..|+||||
T Consensus 214 ~L~~A~~~~~~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 214 ALHCAVASLHPKR-KQVAELLLRKG-ANVNEKNKDFMTPLHVAAERAHNDVMEVLHK------HGAKMNALDSLGQTALH 285 (351)
T ss_dssp HHHHHHHCCSTTH-HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHHhCccH-HHHHHHHHHcC-CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHH
Confidence 99999999 55 79999999984 5588899999999999999999999999999 56678889999999999
Q ss_pred HHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCC
Q 013369 185 LATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARS 249 (444)
Q Consensus 185 ~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 249 (444)
+|++.++.+++++|+++|++ ++.+|..|+||+++| ..++.++|.+.+...
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad-------~~~~~~~g~tal~~a--------~~~~~~~l~~~~~~~ 335 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSD-------PSIISLQGFTAAQMG--------NEAVQQILSESTPMR 335 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHS--------CHHHHHHHHHC----
T ss_pred HHHHcCcHHHHHHHHHcCCC-------CCCcCCCCCChhhhh--------hHHHHHHHHhccccc
Confidence 99999999999999999888 999999999999998 346777777766543
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.3e-34 Score=263.02 Aligned_cols=206 Identities=25% Similarity=0.265 Sum_probs=185.0
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcC--CCCccccCCCCCCHHHHHHH
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQN--PESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~Aa~ 114 (444)
|+||||.|+..|+.++++.|++.+++..+..|.+|.||||+|+..|+.+++++|++++ .+.....|..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 7899999999999999999999999887779999999999999999999999999999 55533388999999999999
Q ss_pred cCCcHHHHHHHHHhC-cchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHH
Q 013369 115 NGQSVDVIRALVSIC-PESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIE 193 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 193 (444)
.|+ .+++++|++.+ +.+++..|..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..++.+
T Consensus 82 ~~~-~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 82 VGN-LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE------NGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HCC-HHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred cCC-HHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHH
Confidence 999 99999999985 35688889999999999999999999999999 56677889999999999999999999
Q ss_pred HHHHHHhcc-CCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHH-HcCCCCCC----CCCCccccc
Q 013369 194 IVKALALES-SNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQ-EASARSPV----QQSPQIAVG 260 (444)
Q Consensus 194 iv~~Ll~~g-a~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~-~~ga~~~~----~~~p~~~~~ 260 (444)
++++|++.| ++ ++.+|..|+||||+|+..+ ..+++++|+ +.|++.+. +.+|.....
T Consensus 155 ~v~~Ll~~g~~~-------~~~~d~~g~t~L~~A~~~~----~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 155 LIELLCGLGKSA-------VNWQDKQGWTPLFHALAEG----HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp HHHHHHTTTCCC-------SCCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred HHHHHHhcCccc-------ccCcCCCCCCHHHHHHHcC----CHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 999999997 55 8999999999999999887 668888888 88998664 566666553
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.4e-34 Score=263.21 Aligned_cols=211 Identities=22% Similarity=0.246 Sum_probs=186.5
Q ss_pred hhcCCCCChHHHHHHhcCCHHHHHHHHh----hCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCC
Q 013369 31 RASSSSENNPLLTACEYGNHQVAKEIAS----RWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSM 106 (444)
Q Consensus 31 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~----~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 106 (444)
+.+|.+|.||||+|+..|+.+++++|++ .+.+ ++..|..|.||||+|+..|+.+++++|++++.++ +..|..|.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 80 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQ 80 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCC
Confidence 3456889999999999999999999998 4444 7789999999999999999999999999999988 68899999
Q ss_pred CHHHHHHHcCCcHHHHHHHHHhCcc---hhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccC-CCCCcH
Q 013369 107 IPLHRAAMNGQSVDVIRALVSICPE---SLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKN-EDGNTV 182 (444)
Q Consensus 107 tpLh~Aa~~g~~~~~v~~Ll~~~~~---~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d-~~G~T~ 182 (444)
||||+|+..|+ .+++++|++.++. +++..|..|.||||+|+..|+.+++++|++ .+..++..| ..|.||
T Consensus 81 t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~~g~t~ 153 (241)
T 1k1a_A 81 TAAHLACEHRS-PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE------RGADIDAVDIKSGRSP 153 (241)
T ss_dssp CHHHHHHHTTC-HHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTTCCCH
T ss_pred CHHHHHHHcCC-HHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHH------cCCCcccccccCCCcH
Confidence 99999999999 9999999998753 577888999999999999999999999999 455667777 889999
Q ss_pred HHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccc
Q 013369 183 LHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIA 258 (444)
Q Consensus 183 Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~ 258 (444)
||+|++.++.+++++|+++|++ ++.+|..|.||||+|+..+ ..+++++|++.|++.+. +.+|...
T Consensus 154 L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 154 LIHAVENNSLSMVQLLLQHGAN-------VNAQMYSGSSALHSASGRG----LLPLVRTLVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-------TTCBCTTSCBHHHHHHHHT----CHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHcC----CHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 9999999999999999999887 9999999999999999886 67899999999998664 5677665
Q ss_pred ccc
Q 013369 259 VGT 261 (444)
Q Consensus 259 ~~~ 261 (444)
...
T Consensus 223 A~~ 225 (241)
T 1k1a_A 223 ARS 225 (241)
T ss_dssp CSS
T ss_pred HHh
Confidence 443
No 28
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5.4e-34 Score=255.46 Aligned_cols=194 Identities=20% Similarity=0.285 Sum_probs=177.9
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..+.||||.|+..|+.+.++.|++.++..++..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 568999999999999999999999998558889999999999999999999999999999988 6889999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCC---
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKS--- 191 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~--- 191 (444)
.|+ .+++++|++.++.+++..|..|.||||+|+..|+.+++++|++.+ ..+++.+|..|+||||+|+..++
T Consensus 82 ~~~-~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 82 QGR-TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG-----REDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp TTC-HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred cCC-HHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999 999999998888888999999999999999999999999999943 25788899999999999999988
Q ss_pred --HHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcC
Q 013369 192 --IEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEAS 246 (444)
Q Consensus 192 --~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~g 246 (444)
.+++++|+++|++ ++.+|..|.||||+|+..+ ..+++++|+++|
T Consensus 156 ~~~~~v~~Ll~~ga~-------~~~~~~~g~t~l~~A~~~~----~~~~~~~Ll~~G 201 (201)
T 3hra_A 156 LYQDIVKLLMENGAD-------QSIKDNSGRTAMDYANQKG----YTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHT----CHHHHHHHHTCC
T ss_pred hHHHHHHHHHHCCCC-------CCccCCCCCCHHHHHHHcC----CHhHHHHHHhcC
Confidence 9999999999887 8999999999999999886 678888888765
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=264.81 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=181.0
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHc
Q 013369 36 SENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMN 115 (444)
Q Consensus 36 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 115 (444)
+|.||||+|+..|+.+++++|++.+.+ ++..|.+|.||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 489999999999999999999999988 7789999999999999999999999999999988 78899999999999999
Q ss_pred CCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHH
Q 013369 116 GQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIV 195 (444)
Q Consensus 116 g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv 195 (444)
|+ .+++++|++.+.+ ++ .+.+|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++
T Consensus 80 ~~-~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 80 GS-WDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHVECVNSLIA------YGGNIDHKISHLGTPLYLACENQQRACV 150 (261)
T ss_dssp TC-HHHHHHHHHTTCC-SS-CSCTTCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCBTTTBCHHHHHHHTTCHHHH
T ss_pred CC-HHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCCcCCCCCCCHHHHHHHhCCHHHH
Confidence 99 9999999998654 33 35669999999999999999999999 5567788999999999999999999999
Q ss_pred HHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccccc
Q 013369 196 KALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIAVG 260 (444)
Q Consensus 196 ~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~~~ 260 (444)
++|+++|++ ++. |..|.||||+|+..+ ..+++++|++.|++.+. +.+|.....
T Consensus 151 ~~Ll~~g~~-------~~~-~~~g~t~Lh~A~~~~----~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 151 KKLLESGAD-------VNQ-GKGQDSPLHAVARTA----SEELACLLMDFGADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp HHHHHHTCC-------TTC-CBTTBCHHHHHHHHT----CHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHHcCCC-------CCC-CCCCCChHHHHHHcC----CHHHHHHHHHcCCCCCCcCCCCCChhhhcc
Confidence 999999887 664 889999999999886 67899999999998654 667766543
No 30
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.2e-33 Score=274.38 Aligned_cols=227 Identities=21% Similarity=0.208 Sum_probs=193.4
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchH----------------------------HhhhcCCCCChHHHHHHhcCCHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDD----------------------------VIRASSSSENNPLLTACEYGNHQV 52 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~----------------------------~~~~~d~~g~t~Lh~Aa~~g~~~~ 52 (444)
|||.|++.|+ .++|+.||+.+.++... ..+..|..|.||||+|+..|+.++
T Consensus 62 pLh~A~~~g~-~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~ 140 (337)
T 4g8k_A 62 PLHNAVQMSR-EDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 140 (337)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHH
Confidence 6999999999 99999999998765421 234467789999999999999999
Q ss_pred HHHHHhhCCccc---------ccccCCCChHHHHHHHCCCHHHHHHHhhc-CCCCccccCCCCCCHHHHHHHcCCc---H
Q 013369 53 AKEIASRWPKLA---------MIKNQHGQTAVHTVAERGDVEMVQFLGKQ-NPESCLVEDNLSMIPLHRAAMNGQS---V 119 (444)
Q Consensus 53 v~~Ll~~~~~~~---------~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~Aa~~g~~---~ 119 (444)
++.|++.+++.. ...+..|.||||+|+..|+.+++++|+++ |.++ +.+|..|.||+|.++..++. .
T Consensus 141 ~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~ 219 (337)
T 4g8k_A 141 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVE 219 (337)
T ss_dssp HHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHH
T ss_pred HHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHH
Confidence 999999987531 23466799999999999999999999975 6776 78999999999988765431 3
Q ss_pred HHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 013369 120 DVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALA 199 (444)
Q Consensus 120 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll 199 (444)
+++++|+++ +.+++.+|.+|+||||+|+..|+.++++.|++. .+.++|.+|.+|+||||+|++.|+.+++++|+
T Consensus 220 ~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~-----~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 220 AITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ-----EHIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp HHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS-----TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh-----cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 577888887 556889999999999999999999999999973 56789999999999999999999999999999
Q ss_pred hccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 200 LESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 200 ~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
++|++ +|. .+||++|+..+ ..+++++|+++||+++.
T Consensus 294 ~~GAd-------~n~-----~~~L~~A~~~~----~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 294 KRGAS-------TDC-----GDLVMTARRNY----DHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp TTSCS-------STT-----CCHHHHHHHTT----CHHHHHHHHHTTCCC--
T ss_pred HCCCC-------CCC-----CCHHHHHHHcC----CHHHHHHHHHCcCCCCC
Confidence 99987 543 46999999886 67899999999999875
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.4e-35 Score=269.12 Aligned_cols=199 Identities=21% Similarity=0.212 Sum_probs=177.0
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhhCCc---ccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHH
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASRWPK---LAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPL 109 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpL 109 (444)
.|.+|.||||+|+..|+.++++.|++.++. .++..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHH
Confidence 457899999999999999999999998763 47789999999999999999999999999999988 68999999999
Q ss_pred HHHHHcCCcHHHHHHHHHhCcc-----hhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCC-CCCcHH
Q 013369 110 HRAAMNGQSVDVIRALVSICPE-----SLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNE-DGNTVL 183 (444)
Q Consensus 110 h~Aa~~g~~~~~v~~Ll~~~~~-----~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~-~G~T~L 183 (444)
|+|+..|+ .+++++|++.+.. ..+..+..|.||||+|+..|+.+++++|++ .+..++.+|. .|+|||
T Consensus 83 ~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 83 HLACEQGC-LASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS------LGADVNAQEPCNGRTAL 155 (236)
T ss_dssp HHHHHHTC-HHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCCHH
T ss_pred HHHHHcCC-HHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCCHH
Confidence 99999999 9999999998643 356778899999999999999999999999 4556777887 999999
Q ss_pred HHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCC
Q 013369 184 HLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSP 250 (444)
Q Consensus 184 h~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 250 (444)
|+|+..++.+++++|+++|++ ++.+|..|.|||++|+..+ ..+++++|+++|++..
T Consensus 156 ~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~tpl~~A~~~~----~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKCGAD-------VNRVTYQGYSPYQLTWGRP----STRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC-------SCCCCTTCCCGGGGCTTSS----CHHHHHHHHTTSCGGG
T ss_pred HHHHHcCCHHHHHHHHHcCCC-------CCcccCCCCCHHHHHHccC----chHHHHHHHHcchhhh
Confidence 999999999999999999887 9999999999999999876 7789999999999654
No 32
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.4e-34 Score=259.90 Aligned_cols=202 Identities=20% Similarity=0.177 Sum_probs=174.3
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhh-CCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCc----cccCCCCCCHHH
Q 013369 36 SENNPLLTACEYGNHQVAKEIASR-WPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESC----LVEDNLSMIPLH 110 (444)
Q Consensus 36 ~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~g~tpLh 110 (444)
.|+||||+|+..|+.++++.|++. +.+ ++.+|.+|+||||+|+..|+.+++++|++++++.. +..|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 489999999999999999999998 555 78899999999999999999999999999998753 356778999999
Q ss_pred HHHHcCCcHHHHHHHHHhCcchhhcccc-------------CCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCC
Q 013369 111 RAAMNGQSVDVIRALVSICPESLEKLTS-------------NQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNE 177 (444)
Q Consensus 111 ~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~-------------~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~ 177 (444)
+|+..|+ .+++++|++++. +++..+. .|+||||+|+..|+.+++++|++ .+.+++.+|.
T Consensus 81 ~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~ 152 (232)
T 2rfa_A 81 IAVINQN-VNLVRALLARGA-SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------HGADIRAQDS 152 (232)
T ss_dssp HHHHTTC-HHHHHHHHHTTC-CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH------TTCCTTCCCT
T ss_pred HHHHcCC-HHHHHHHHhCCC-CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCC
Confidence 9999999 999999999854 3555544 79999999999999999999999 5667888999
Q ss_pred CCCcHHHHHHhcCCHHHH----HHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 178 DGNTVLHLATFNKSIEIV----KALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 178 ~G~T~Lh~A~~~~~~~iv----~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
+|+||||+|+..++.+++ ++|+++|++... .-..+.+|..|+||||+|+..+ ..+++++|+++|+....
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~-~~~~~~~~~~g~tpl~~A~~~g----~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHL-KSLELVPNNQGLTPFKLAGVEG----NIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSS-CCGGGCCCTTSCCHHHHHHHHT----CHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhh-hhhhccCCCCCCCHHHHHHHcC----CHHHHHHHHhcCccchh
Confidence 999999999999999988 999999887210 0011689999999999999887 77899999999876554
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-33 Score=258.73 Aligned_cols=195 Identities=20% Similarity=0.208 Sum_probs=173.5
Q ss_pred ChhHHhhcCCcHHHHHHHHhc-CCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCccc----ccccCCCChHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSK-IPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLA----MIKNQHGQTAV 75 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~-~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~G~tpL 75 (444)
|||.|++.|+ .++++.|++. +.++ +.+|..|.||||+|+..|+.+++++|++.+++.. +..|.+|.|||
T Consensus 6 ~L~~A~~~g~-~~~v~~Ll~~~g~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 6 PLLLAAKEND-VQALSKLLKFEGCEV-----HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp HHHHHHHTTC-HHHHHHHHTTTCSCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred HHHHHHHcCC-HHHHHHHHHhcCCCc-----ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 6999999999 9999999998 6553 3456789999999999999999999999998743 45678999999
Q ss_pred HHHHHCCCHHHHHHHhhcCCCCccccCC-------------CCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCC
Q 013369 76 HTVAERGDVEMVQFLGKQNPESCLVEDN-------------LSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDT 142 (444)
Q Consensus 76 h~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-------------~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t 142 (444)
|+|+..|+.+++++|+++++++ +..+. .|.||||+|+..|+ .+++++|+++ +.+++.+|.+|+|
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-ga~~~~~d~~g~t 156 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGS-EEIVRLLIEH-GADIRAQDSLGNT 156 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCC-HHHHHHHHHC-CCCCCCCCCCCCC
Confidence 9999999999999999999887 44443 79999999999999 9999999998 5568899999999
Q ss_pred HHHHHHHcCCHHHH----HHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 143 ALHLAVKNSHLEAF----QVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 143 ~Lh~A~~~g~~~iv----~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
|||+|+.+|+.+++ ++|++.|.+.......+.+|.+|+||||+|++.|+.+++++|+++|++
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999999988 999997766544445578999999999999999999999999999775
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.9e-33 Score=255.50 Aligned_cols=204 Identities=22% Similarity=0.235 Sum_probs=186.6
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..++||||.|+..|+.+.++.|++.++...+..|.+|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+.
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHH
Confidence 458999999999999999999999998888889999999999999999999999999999887 6889999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEI 194 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i 194 (444)
.|+ .+++++|++++ .+++..|..|.||||+|+..|+.+++++|++ .+..++.+|..|.||||+|+..++.++
T Consensus 83 ~~~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 154 (231)
T 3aji_A 83 AGX-DEIVKALLVKG-AHVNAVNQNGCTPLHYAASKNRHEIAVMLLE------GGANPDAKDHYDATAMHRAAAKGNLKM 154 (231)
T ss_dssp HTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred cCH-HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 999 99999999984 4578889999999999999999999999999 556678899999999999999999999
Q ss_pred HHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccc
Q 013369 195 VKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIA 258 (444)
Q Consensus 195 v~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~ 258 (444)
+++|+++|++ ++.+|..|+||||+|+..+ ..+++++|++.|++.+. +.+|...
T Consensus 155 v~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 211 (231)
T 3aji_A 155 VHILLFYKAS-------TNIQDTEGNTPLHLACDEE----RVEEAKFLVTQGASIYIENKEEKTPLQV 211 (231)
T ss_dssp HHHHHHTTCC-------SCCCCTTSCCHHHHHHHTT----CHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred HHHHHhcCCC-------ccccCCCCCCHHHHHHHCC----CHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 9999999887 8999999999999999886 67899999999998654 4555443
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-34 Score=270.56 Aligned_cols=243 Identities=23% Similarity=0.242 Sum_probs=205.0
Q ss_pred hHHhhcCCcHHHHHHHHhcCCCCchHHhh----hcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHH
Q 013369 3 EEALRKDDHVDEVKLLLSKIPKLSDDVIR----ASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTV 78 (444)
Q Consensus 3 ~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~----~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A 78 (444)
+.+++++. .+.++.++............ ..+.+|.||||.||..|+.++++.|++.+++ ++..|.+|.||||+|
T Consensus 3 ~~~a~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 80 (299)
T 1s70_B 3 MADAKQKR-NEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQA 80 (299)
T ss_dssp SHHHHHHH-HHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHH
T ss_pred hhHHHHHH-HHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHH
Confidence 46788888 89999999876654332211 1223578999999999999999999999988 678999999999999
Q ss_pred HHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHH
Q 013369 79 AERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQV 158 (444)
Q Consensus 79 a~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~ 158 (444)
+..|+.+++++|+++|+++ +..|..|.||||+|+..|+ .+++++|++++ .+++..|..|.||||+|+..++.++++.
T Consensus 81 ~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 157 (299)
T 1s70_B 81 CIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGY-LDIAEYLISQG-AHVGAVNSEGDTPLDIAEEEAMEELLQN 157 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCC-HHHHHHHHhCC-CCCCCcCCCCCCHHHHHHhcchHHHHHH
Confidence 9999999999999999998 7889999999999999999 99999999984 5578889999999999999999999998
Q ss_pred HHHhc-cccc--------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCcccccccccccc
Q 013369 159 LVKVS-KIHN--------------------KEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNK 217 (444)
Q Consensus 159 Ll~~~-~~~~--------------------~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~ 217 (444)
++... .+.+ ........|..|.||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 158 ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-------~~~~d~ 230 (299)
T 1s70_B 158 EVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-------VNIKDY 230 (299)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCT
T ss_pred HHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-------CCCcCC
Confidence 87632 1110 1112234678899999999999999999999999887 999999
Q ss_pred CCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCcccccc
Q 013369 218 QGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIAVGT 261 (444)
Q Consensus 218 ~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~~~~ 261 (444)
.|.||||+|+..+ ..+++++|++.|++.+. +.+|.....+
T Consensus 231 ~g~tpL~~A~~~~----~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 231 DGWTPLHAAAHWG----KEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TCCCHHHHHHHTT----CHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred CCCcHHHHHHhcC----CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999987 67899999999998654 7888876644
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1e-33 Score=268.47 Aligned_cols=215 Identities=13% Similarity=0.033 Sum_probs=187.9
Q ss_pred HhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCH
Q 013369 5 ALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDV 84 (444)
Q Consensus 5 A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~ 84 (444)
+++..+ .+.+..+|... + .+.+|..|.||||+|+..|+.+++++|++.+++ ++.. +|+||||+|+..|+.
T Consensus 6 ~i~~~~-~~~v~~lL~~~-~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 6 RINTWK-SKQLKSFLSSK-D-----TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp TGGGCC-HHHHHHHHHST-T-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSC
T ss_pred HHHhcC-HHHHHHHHHhC-C-----CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCH
Confidence 456677 66666666553 2 345678899999999999999999999999987 4444 599999999999999
Q ss_pred HHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCC-CCHHHHHHHcCCHHHHHHHHHhc
Q 013369 85 EMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQ-DTALHLAVKNSHLEAFQVLVKVS 163 (444)
Q Consensus 85 ~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~iv~~Ll~~~ 163 (444)
+++++|+++|+++ +.+|..|.||||+|+..|+ .+++++|+++ +.+++..|..| .||||+|+..|+.+++++|++.|
T Consensus 76 ~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g 152 (285)
T 3kea_A 76 KIVKILLFSGLDD-SQFDDKGNTALYYAVDSGN-MQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI 152 (285)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCC-HHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 9999999999998 6889999999999999999 9999999999 55688889999 89999999999999999999965
Q ss_pred ccccccccccccCC-CCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCH-HHHHHHcCCchhHHHHHHH
Q 013369 164 KIHNKEHVFNWKNE-DGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTA-LEVCKANSEDSVFKEIGLI 241 (444)
Q Consensus 164 ~~~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~-L~~A~~~~~~~~~~~i~~~ 241 (444)
.+. .|. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+|| ||+|+..+ ..+++++
T Consensus 153 ~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-------~n~~~~~g~t~~L~~A~~~~----~~~~v~~ 213 (285)
T 3kea_A 153 PST--------FDLAILLSCIHITIKNGHVDMMILLLDYMTS-------TNTNNSLLFIPDIKLAIDNK----DIEMLQA 213 (285)
T ss_dssp CTT--------CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHH-------TCTTCCCBCCTTHHHHHHHT----CHHHHHH
T ss_pred Ccc--------ccccCCccHHHHHHHcChHHHHHHHHHcCCC-------CCcccCCCCChHHHHHHHcC----CHHHHHH
Confidence 432 233 899999999999999999999999776 99999999998 99999886 6789999
Q ss_pred HHHcCCCCCC
Q 013369 242 LQEASARSPV 251 (444)
Q Consensus 242 L~~~ga~~~~ 251 (444)
|+++|++.+.
T Consensus 214 Ll~~gad~~~ 223 (285)
T 3kea_A 214 LFKYDINIYS 223 (285)
T ss_dssp HTTSCBCSTT
T ss_pred HHHcCCCCCC
Confidence 9999998775
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.1e-34 Score=273.23 Aligned_cols=213 Identities=19% Similarity=0.156 Sum_probs=189.3
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+.+++. .+|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+.
T Consensus 34 ~L~~A~~~g~-~~~v~~Ll~~g~~~~~-------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 34 ASYYAIADNN-VRLVCTLLNAGALKNL-------LENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVD 104 (285)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTGGGSC-------CTTCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHhCCCCCCC-------CCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHH
Confidence 6999999999 9999999999877533 2489999999999999999999999998 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCC-CCHHHHHHHcCCcHHHHHHHHHhCcchhhcccc-CCCCHHHHHHHcCCHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLS-MIPLHRAAMNGQSVDVIRALVSICPESLEKLTS-NQDTALHLAVKNSHLEAFQV 158 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g-~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~iv~~ 158 (444)
.|+.+++++|+++|+++ +.+|..| .||||+|+..|+ .+++++|+++++.. .+. .|+||||+|+..|+.+++++
T Consensus 105 ~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~-~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLND-VSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp TTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTC-HHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCC-HHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHH
Confidence 99999999999999998 6888889 899999999999 99999999997653 333 89999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcH-HHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHH
Q 013369 159 LVKVSKIHNKEHVFNWKNEDGNTV-LHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKE 237 (444)
Q Consensus 159 Ll~~~~~~~~~~~~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~ 237 (444)
|++. +.+++.+|..|+|| ||+|+..++.+++++|+++|++ ++..|. .++.. ...+
T Consensus 180 Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad-------~~~~~~-------~a~~~----~~~~ 235 (285)
T 3kea_A 180 LLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN-------IYSANL-------ENVLL----DDAE 235 (285)
T ss_dssp HHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC-------STTTTG-------GGGTT----TCHH
T ss_pred HHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCh-------hhhhc----CCHH
Confidence 9994 45677899999998 9999999999999999999888 777774 22333 3778
Q ss_pred HHHHHHHcCCCCCC
Q 013369 238 IGLILQEASARSPV 251 (444)
Q Consensus 238 i~~~L~~~ga~~~~ 251 (444)
++++|+++|++...
T Consensus 236 iv~~Ll~~g~~~~~ 249 (285)
T 3kea_A 236 IAKMIIEKHVEYKS 249 (285)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999987654
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.7e-33 Score=250.04 Aligned_cols=189 Identities=21% Similarity=0.222 Sum_probs=173.1
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|+..|+ .+.++.|++.++.. .+..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 8 ~L~~A~~~g~-~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 8 ALLEAANQRD-TKKVKEILQDTTYQ----VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGA 81 (201)
T ss_dssp HHHHHHHTTC-HHHHHHHHTCTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhcc-HHHHHHHHHcCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 5899999999 99999999987621 344567899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCC-----HHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSH-----LEA 155 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-----~~i 155 (444)
.|+.+++++|++.+....+..|..|.||||+|+..|+ .+++++|++.++.+++..|..|+||||+|+..++ .++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~ 160 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH-IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDI 160 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC-HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHH
Confidence 9999999999966665557899999999999999999 9999999999878899999999999999999998 999
Q ss_pred HHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q 013369 156 FQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALES 202 (444)
Q Consensus 156 v~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 202 (444)
+++|++ .+.+++.+|.+|+||||+|++.++.+++++|+++|
T Consensus 161 v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 161 VKLLME------NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHH------CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999 55677889999999999999999999999999875
No 39
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-34 Score=283.86 Aligned_cols=228 Identities=16% Similarity=0.174 Sum_probs=195.4
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcC-CCCChHHHHHHhcCCHHHHHHHH--------hhCCcccccccCCC
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASS-SSENNPLLTACEYGNHQVAKEIA--------SRWPKLAMIKNQHG 71 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d-~~g~t~Lh~Aa~~g~~~~v~~Ll--------~~~~~~~~~~d~~G 71 (444)
|||.|+. |+ .++++.|++.+ .+..| ..|.||||+|+..|+.++++.|+ +.+.+ ++..|.+|
T Consensus 97 ~L~~Aa~-~~-~~~~~~L~~~~-------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g 166 (373)
T 2fo1_E 97 KLHTEAA-GS-YAITEPITRES-------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDE 166 (373)
T ss_dssp HHHHHHH-SS-SCCCSCCSTTT-------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTS
T ss_pred HHHHHhc-CC-chHHHHhcccc-------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCC
Confidence 4788888 44 46666665432 23344 57999999999999998888776 67777 67899999
Q ss_pred ChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCc--chhhccccCCCCHHHHHHH
Q 013369 72 QTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICP--ESLEKLTSNQDTALHLAVK 149 (444)
Q Consensus 72 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~--~~~~~~d~~g~t~Lh~A~~ 149 (444)
.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+ .+++++|++.++ .+++..|..|.||||+|+.
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRD-FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTC-HHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCC-HHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 99999999999999999999999998 6899999999999999999 999999999753 5678889999999999999
Q ss_pred cC---CHHHHHHHHHhccccccc--ccccccCCCCCcHHHHHHhcCCHHHHHHHHhcc-CCCccccccccccccCCCCHH
Q 013369 150 NS---HLEAFQVLVKVSKIHNKE--HVFNWKNEDGNTVLHLATFNKSIEIVKALALES-SNSSSIMIRVNTLNKQGQTAL 223 (444)
Q Consensus 150 ~g---~~~iv~~Ll~~~~~~~~~--~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g-a~~~~~~v~~~~~n~~G~T~L 223 (444)
.+ +.+++++|++.|.+++.. ...+..|..|+||||+|+..|+.+++++|++++ ++ ++.+|..|.|||
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-------~n~~d~~g~TpL 317 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-------KDKQDEDGKTPI 317 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-------TTCCCTTCCCHH
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-------ccCcCCCCCCHH
Confidence 98 899999999977665421 123457889999999999999999999999985 54 999999999999
Q ss_pred HHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 224 EVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 224 ~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
|+|+..+ ..+++++|++.|++.+.
T Consensus 318 ~~A~~~g----~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 318 MLAAQEG----RIEVVMYLIQQGASVEA 341 (373)
T ss_dssp HHHHHHT----CHHHHHHHHHTTCCSSC
T ss_pred HHHHHcC----CHHHHHHHHHcCCCccC
Confidence 9999887 77899999999998664
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-32 Score=250.52 Aligned_cols=189 Identities=19% Similarity=0.135 Sum_probs=175.9
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++++.|++.+.++. ..|..|.||||+|+..|+.+++++|++.++...+..|..|.||||+|+.
T Consensus 28 ~L~~A~~~g~-~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 28 ALHLAARYSR-SDAAKRLLEASADAN-----IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred hHHHHHHcCC-HHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 6899999999 999999999987753 3457899999999999999999999999986688899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++. +.+++..|..|.||||+|+..|+.+++++|+
T Consensus 102 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 178 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNN-VDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLL 178 (223)
T ss_dssp HTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred hCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999988 6889999999999999999 9999999998 5568889999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
+ .+.+++.+|..|.||||+|++.++.+++++|+++|+.
T Consensus 179 ~------~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 179 D------HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp H------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred H------cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 9 4556778999999999999999999999999999886
No 41
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.5e-33 Score=273.92 Aligned_cols=225 Identities=18% Similarity=0.122 Sum_probs=190.8
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhh----CCccccc----------
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASR----WPKLAMI---------- 66 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~----~~~~~~~---------- 66 (444)
|||.|++.|+ .++|+.|++.+.+... .+|.||||+|+..|+.+++++|++. +.+ .+.
T Consensus 56 ~L~~A~~~g~-~~~v~~Ll~~g~~~~~-------~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~ 126 (364)
T 3ljn_A 56 ALHLACKFGC-VDTAKYLASVGEVHSL-------WHGQKPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREV 126 (364)
T ss_dssp HHHHHHHHCC-HHHHHHHHHHCCCCCC-------BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCE
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCCccc-------cCCCCHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhh
Confidence 6999999999 9999999999885422 4699999999999999999999998 554 333
Q ss_pred -------ccCCCChHHHHHHHCC--CHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcch----h
Q 013369 67 -------KNQHGQTAVHTVAERG--DVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPES----L 133 (444)
Q Consensus 67 -------~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~----~ 133 (444)
.|..|.||||+|+..| +.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++.+++. +
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~ 204 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRN-REALDLMMDTVPSKSSLRL 204 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHHCSCSSSCCT
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCC-HHHHHHHHhcccccccccc
Confidence 7889999999999999 999999999999998 7899999999999999999 99999999986543 7
Q ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCcc-----c
Q 013369 134 EKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSS-----I 208 (444)
Q Consensus 134 ~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~-----~ 208 (444)
+..|..|+||||+|+.+|+.+++++|++ .+.+++.+|.+|+||||+|++.|+.+++++|+++|++... .
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 278 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVE------MGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYH 278 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTB
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCccc
Confidence 8889999999999999999999999999 5667788999999999999999999999999999876100 0
Q ss_pred cccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHc
Q 013369 209 MIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEA 245 (444)
Q Consensus 209 ~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ 245 (444)
.......+..+.||++.|+..+ ...++.++|.+.
T Consensus 279 ~~~~~~~~~~~~~~l~~aa~~~---~~~~v~~ll~~~ 312 (364)
T 3ljn_A 279 NGTTVLPDRVVWLDFVPAAADP---SKQEVLQLLQEK 312 (364)
T ss_dssp SSSSBCGGGCCCCTTSCSSCCH---HHHHHHHHHHHH
T ss_pred Ccccccccccccccchhhhhcc---CHHHHHHHHHHH
Confidence 0112236778889998887654 344555555443
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.7e-34 Score=262.81 Aligned_cols=212 Identities=17% Similarity=0.179 Sum_probs=183.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|+..|+ .++++.|++.++... ..++..|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 11 ~L~~A~~~g~-~~~v~~Ll~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 87 (236)
T 1ikn_D 11 FLHLAIIHEE-KALTMEVIRQVKGDL-AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHLACE 87 (236)
T ss_dssp TTHHHHHTTC-SSSSSCCCC-----C-CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHHHHHH
T ss_pred hhHHHHHcCC-hhHHHHHHHHhhccH-HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 7999999999 999999999865421 12445567899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCC-----ccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhcccc-CCCCHHHHHHHcCCHH
Q 013369 81 RGDVEMVQFLGKQNPES-----CLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTS-NQDTALHLAVKNSHLE 154 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~-----~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~g~~~ 154 (444)
.|+.+++++|++.+++. .+..+..|.||||+|+..|+ .+++++|++.+ .+++..+. .|+||||+|+..|+.+
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 88 QGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY-LGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC-HHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC-HHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999998653 46788899999999999999 99999999985 45777776 9999999999999999
Q ss_pred HHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHH
Q 013369 155 AFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKA 228 (444)
Q Consensus 155 iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~ 228 (444)
++++|++ .+.+++.+|..|+||||+|+..++.+++++|+++|++. .....+.+|.||.+.+..
T Consensus 166 ~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-----~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 166 LVSLLLK------CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN-----LQMLPESEDEESYDTESE 228 (236)
T ss_dssp HHHHHHT------TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG-----GSSCCCCCTTTCCCCC--
T ss_pred HHHHHHH------cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh-----hhcCCccchHHHHhhhcc
Confidence 9999999 56678889999999999999999999999999999871 245789999999887644
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-33 Score=261.61 Aligned_cols=208 Identities=20% Similarity=0.189 Sum_probs=160.4
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhhCCcc-------cccccCCCChHHHHHHHCCCH-HHHHHHhhcCCCCccccCCC
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASRWPKL-------AMIKNQHGQTAVHTVAERGDV-EMVQFLGKQNPESCLVEDNL 104 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~-------~~~~d~~G~tpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~d~~ 104 (444)
+|..+.+||+.||..|+.++|++|++.+++. .+..|..|.||||.|+..++. ++++.|++.|.++ +.+|.+
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~ 85 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQD 85 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCTT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCC
Confidence 4556789999999999999999999988643 456778899999999988876 4889999999998 799999
Q ss_pred CCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHH
Q 013369 105 SMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLH 184 (444)
Q Consensus 105 g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 184 (444)
|+||||+|+..|+ .+++++|++.+ .+++..+.+|.||+|+|+..++.+++++|++ .+.++|.+|..|+||||
T Consensus 86 G~TpLh~A~~~g~-~~~v~~Ll~~~-a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~------~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 86 GSSPLHVAALHGR-ADLIPLLLKHG-ANAGARNADQAVPLHLACQQGHFQVVKCLLD------SNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp SCCHHHHHHHTTC-TTHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCc-HHHHHHHHhcC-CCcCccCCCCCCccccccccChHHHHHHHHH------CCCCCCCCCCCCCCHHH
Confidence 9999999999999 99999999985 4578889999999999999999999999999 55677889999999999
Q ss_pred HHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccccc
Q 013369 185 LATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIAVG 260 (444)
Q Consensus 185 ~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~~~ 260 (444)
+|++.|+.+++++|+++|++ +|.+|..|.||||+|+..+ ..+++++|+++|++.+. +.||.....
T Consensus 158 ~A~~~g~~~~v~~Ll~~gad-------vn~~~~~g~t~Lh~A~~~g----~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGAS-------INASNNKGNTALHEAVIEK----HVFVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCC-------TTCBCTTSCBHHHHHHHTT----CHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred HHHHCCCHHHHHHHHHCCCC-------CCccccCCCcHHHHHHHcC----CHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999887 9999999999999999987 67899999999998764 678877653
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.4e-32 Score=236.70 Aligned_cols=156 Identities=30% Similarity=0.407 Sum_probs=144.3
Q ss_pred hHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCc
Q 013369 39 NPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQS 118 (444)
Q Consensus 39 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~ 118 (444)
++|+.||+.|+.++|+.|++.|++ ++.+|.+|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~- 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH- 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC-
Confidence 579999999999999999999998 7889999999999999999999999999999998 7899999999999999999
Q ss_pred HHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHH
Q 013369 119 VDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKAL 198 (444)
Q Consensus 119 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~L 198 (444)
.+++++|++++ .+++.+|.+|+||||+|+.+|+.+++++|++ .+.+++.+|.+|+||||+|++.|+.+++++|
T Consensus 83 ~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 83 KEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLIS------KGADVNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999984 5688999999999999999999999999999 5567788999999999999999999999999
Q ss_pred HhccCC
Q 013369 199 ALESSN 204 (444)
Q Consensus 199 l~~ga~ 204 (444)
+++|++
T Consensus 156 l~~GA~ 161 (169)
T 4gpm_A 156 EKQGGW 161 (169)
T ss_dssp HTC---
T ss_pred HHCCCC
Confidence 999998
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.2e-33 Score=263.15 Aligned_cols=213 Identities=19% Similarity=0.213 Sum_probs=169.0
Q ss_pred ChhHHhhcCCcHHHHHHHHhc----CCCCchHHhhhcCCCCChHHHHHHhc---CCHHHHHHHHhhCCcc------cc--
Q 013369 1 MFEEALRKDDHVDEVKLLLSK----IPKLSDDVIRASSSSENNPLLTACEY---GNHQVAKEIASRWPKL------AM-- 65 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~----~~~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~------~~-- 65 (444)
|||.|++.|+ .++|+.|++. +.++.. .....|..|.||||+|+.. |+.+++++|++.+++. ++
T Consensus 16 ~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~-~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~ 93 (273)
T 2pnn_A 16 SIFDAVAQSN-CQELESLLPFLQRSKKRLTD-SEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNAS 93 (273)
T ss_dssp HHHHHHHTTC-SSTTTTHHHHHHHSCCCTTS-GGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHcCC-HHHHHHHHHHHhhcccccCC-cccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcc
Confidence 5899999999 9999999974 333321 1123457899999999987 9999999999997542 22
Q ss_pred --cccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCC--------------CCCCHHHHHHHcCCcHHHHHHHHHh-
Q 013369 66 --IKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDN--------------LSMIPLHRAAMNGQSVDVIRALVSI- 128 (444)
Q Consensus 66 --~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~g~tpLh~Aa~~g~~~~~v~~Ll~~- 128 (444)
..|..|.||||+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+ .+++++|++.
T Consensus 94 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~~ 171 (273)
T 2pnn_A 94 YTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ-LAIVKFLLQNS 171 (273)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTC-HHHHHHHHHCS
T ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCC-HHHHHHHHhcc
Confidence 25678999999999999999999999999988 56665 79999999999999 9999999994
Q ss_pred -CcchhhccccCCCCHHHHHHHcCC---------HHHHHHHHHhcccccc-cccccccCCCCCcHHHHHHhcCCHHHHHH
Q 013369 129 -CPESLEKLTSNQDTALHLAVKNSH---------LEAFQVLVKVSKIHNK-EHVFNWKNEDGNTVLHLATFNKSIEIVKA 197 (444)
Q Consensus 129 -~~~~~~~~d~~g~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~-~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~ 197 (444)
.+.+++.+|.+|+||||+|+..|+ .+++++|++.|.+++. ...++.+|.+|+||||+|++.|+.+++++
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 367789999999999999999998 8999999997765532 12234689999999999999999999999
Q ss_pred HHhccCCCccccccccccccCCCCHH
Q 013369 198 LALESSNSSSIMIRVNTLNKQGQTAL 223 (444)
Q Consensus 198 Ll~~ga~~~~~~v~~~~~n~~G~T~L 223 (444)
|+++|+. |+......+.+|-
T Consensus 252 Ll~~ga~------dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 252 ILQREIH------EPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHTC-------------------
T ss_pred HHHCCCC------Cchhhhhhhhhcc
Confidence 9999984 2555555555543
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=1.8e-32 Score=255.45 Aligned_cols=197 Identities=17% Similarity=0.147 Sum_probs=170.4
Q ss_pred CChHHHHHHhcCCHH----HHHHHHhhCCccccc----ccCCCChHHHHHHHC---CCHHHHHHHhhcCCCCcc------
Q 013369 37 ENNPLLTACEYGNHQ----VAKEIASRWPKLAMI----KNQHGQTAVHTVAER---GDVEMVQFLGKQNPESCL------ 99 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~----~v~~Ll~~~~~~~~~----~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~------ 99 (444)
|+||||.|+..|+.+ ++++|++.+.+ ++. .|.+|+||||+|+.. |+.+++++|++.+++...
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 789999999999997 56777778887 455 799999999999999 999999999999876532
Q ss_pred ----ccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccC-------------CCCHHHHHHHcCCHHHHHHHHHh
Q 013369 100 ----VEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSN-------------QDTALHLAVKNSHLEAFQVLVKV 162 (444)
Q Consensus 100 ----~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~-------------g~t~Lh~A~~~g~~~iv~~Ll~~ 162 (444)
.+|..|.||||+|+..|+ .+++++|++.+ .+++..|.. |+||||+|+..|+.+++++|++.
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRS-LQCVKLLVENG-ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCHHHHHHHcCC-HHHHHHHHHcC-CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 234779999999999999 99999999984 457777765 99999999999999999999982
Q ss_pred cccccccccccccCCCCCcHHHHHHh--cCCHH-------HHHHHHhccCCCccccccc-------cccccCCCCHHHHH
Q 013369 163 SKIHNKEHVFNWKNEDGNTVLHLATF--NKSIE-------IVKALALESSNSSSIMIRV-------NTLNKQGQTALEVC 226 (444)
Q Consensus 163 ~~~~~~~~~~~~~d~~G~T~Lh~A~~--~~~~~-------iv~~Ll~~ga~~~~~~v~~-------~~~n~~G~T~L~~A 226 (444)
+ ..+.++|.+|.+|+||||+|+. .++.+ ++++|+++|++ + +.+|..|+||||+|
T Consensus 159 ~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~-------~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 159 P---HQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR-------LCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp S---SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH-------HSTTCCGGGCCCTTSCCHHHHH
T ss_pred c---ccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC-------cccccccccccCCCCCCHHHHH
Confidence 1 0355678899999999999999 88888 99999999776 6 89999999999999
Q ss_pred HHcCCchhHHHHHHHHHHcCCCCC
Q 013369 227 KANSEDSVFKEIGLILQEASARSP 250 (444)
Q Consensus 227 ~~~~~~~~~~~i~~~L~~~ga~~~ 250 (444)
+..+ ..+++++|+++|+...
T Consensus 229 ~~~g----~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 229 AKEG----KIEIFRHILQREFSGA 248 (256)
T ss_dssp HHTT----CHHHHHHHHHHHHHHH
T ss_pred HHhC----CHHHHHHHHhCCCCCC
Confidence 9987 7788999999887544
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=3.1e-32 Score=253.77 Aligned_cols=200 Identities=21% Similarity=0.187 Sum_probs=169.2
Q ss_pred ChhHHhhcCCcHH----HHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhc---CCHHHHHHHHhhCCcccc--------
Q 013369 1 MFEEALRKDDHVD----EVKLLLSKIPKLSDDVIRASSSSENNPLLTACEY---GNHQVAKEIASRWPKLAM-------- 65 (444)
Q Consensus 1 ~L~~A~~~g~~~~----~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~-------- 65 (444)
|||.|++.|+ .+ +++.|++.+.+++... ..+|..|.||||+|+.. |+.+++++|++.+++...
T Consensus 5 ~L~~A~~~g~-~~~v~~ll~~l~~~g~~i~~~~-~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 82 (256)
T 2etb_A 5 RLFSVVSRGV-PEELTGLLEYLRWNSKYLTDSA-YTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ 82 (256)
T ss_dssp HHHHHHHHTC-GGGGTTHHHHHHHHTCCTTSGG-GSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC
T ss_pred HHHHHHHcCC-HHHHHHHHHHHHHcCCCccccc-ccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc
Confidence 6999999999 97 5566666787764311 12467899999999999 999999999999876321
Q ss_pred --cccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCC-------------CCCHHHHHHHcCCcHHHHHHHHHh--
Q 013369 66 --IKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNL-------------SMIPLHRAAMNGQSVDVIRALVSI-- 128 (444)
Q Consensus 66 --~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-------------g~tpLh~Aa~~g~~~~~v~~Ll~~-- 128 (444)
..|..|.||||+|+..|+.+++++|+++|+++ +..|.. |.||||+|+..|+ .+++++|++.
T Consensus 83 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~~~ 160 (256)
T 2etb_A 83 CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQ-WDVVTYLLENPH 160 (256)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC-HHHHHHHHHCSS
T ss_pred cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCC-HHHHHHHHhccc
Confidence 23477999999999999999999999999998 566665 9999999999999 9999999994
Q ss_pred CcchhhccccCCCCHHHHHHH--cCCHH-------HHHHHHHhccccccccc-ccccCCCCCcHHHHHHhcCCHHHHHHH
Q 013369 129 CPESLEKLTSNQDTALHLAVK--NSHLE-------AFQVLVKVSKIHNKEHV-FNWKNEDGNTVLHLATFNKSIEIVKAL 198 (444)
Q Consensus 129 ~~~~~~~~d~~g~t~Lh~A~~--~g~~~-------iv~~Ll~~~~~~~~~~~-~~~~d~~G~T~Lh~A~~~~~~~iv~~L 198 (444)
.+.+++.+|.+|+||||+|+. +++.+ ++++|++.|.+++.... .+.+|.+|+||||+|++.|+.+++++|
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L 240 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence 467789999999999999999 88988 99999997665432111 178999999999999999999999999
Q ss_pred HhccCC
Q 013369 199 ALESSN 204 (444)
Q Consensus 199 l~~ga~ 204 (444)
+++|++
T Consensus 241 l~~g~~ 246 (256)
T 2etb_A 241 LQREFS 246 (256)
T ss_dssp HHHHHH
T ss_pred HhCCCC
Confidence 999775
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=1.9e-32 Score=257.75 Aligned_cols=208 Identities=14% Similarity=0.131 Sum_probs=170.3
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhh----CCcccc---cccCCCChHHHHHHHC---CCHHHHHHHhhcCCCCc----
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASR----WPKLAM---IKNQHGQTAVHTVAER---GDVEMVQFLGKQNPESC---- 98 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~----~~~~~~---~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~---- 98 (444)
.|..|.||||.|+..|+.++++.|++. +.++.. ..|..|+||||+|+.. |+.+++++|++.+++..
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 457899999999999999999999974 333211 4588999999999987 99999999999976431
Q ss_pred ------cccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhcccc--------------CCCCHHHHHHHcCCHHHHHH
Q 013369 99 ------LVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTS--------------NQDTALHLAVKNSHLEAFQV 158 (444)
Q Consensus 99 ------~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~g~~~iv~~ 158 (444)
...|..|.||||+|+..|+ .+++++|++.+ .+++..+. .|+||||+|+..|+.+++++
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~-~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRN-MTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCC-HHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1256789999999999999 99999999984 45777776 79999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcHHHHHHhcCC---------HHHHHHHHhccCCCccccccccccccCCCCHHHHHHHc
Q 013369 159 LVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKS---------IEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKAN 229 (444)
Q Consensus 159 Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~---------~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~ 229 (444)
|++.+. .+.+++.+|.+|+||||+|++.++ .+++++|+++|++.....-.++.+|..|+||||+|+..
T Consensus 167 Ll~~~~---~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 167 LLQNSW---QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHCSS---CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHhccc---CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 998210 345678899999999999999888 89999999998761000000136999999999999998
Q ss_pred CCchhHHHHHHHHHHcCCCC
Q 013369 230 SEDSVFKEIGLILQEASARS 249 (444)
Q Consensus 230 ~~~~~~~~i~~~L~~~ga~~ 249 (444)
+ ..+++++|+++|+..
T Consensus 244 g----~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 244 G----KIGVLAYILQREIHE 259 (273)
T ss_dssp T----CHHHHHHHHHHHTC-
T ss_pred C----hHHHHHHHHHCCCCC
Confidence 7 788999999999953
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-32 Score=266.39 Aligned_cols=199 Identities=14% Similarity=0.150 Sum_probs=163.1
Q ss_pred hHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCC
Q 013369 3 EEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERG 82 (444)
Q Consensus 3 ~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g 82 (444)
|.|+..+. .++++.|++.+.+++.. .|..|.||||+|+..|+.++|++|+++|++ ++.+|.+|+||||+|+..|
T Consensus 102 ~~a~~~~~-~~~~~~l~~~g~dvn~~----~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 102 HVSFDSLL-QEVNDAFPNTQLNLNIP----VDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSV 175 (327)
T ss_dssp --CHHHHH-HHHHHHCTTSCCCSCSC----CSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSS
T ss_pred HHHHHhhH-HHHHHHHHhcCCCcccc----cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhc
Confidence 55666666 78888888888775431 457899999999999999999999999988 6789999999999999999
Q ss_pred C---HHHHHHHhhcCCCCccccCCCCCCHHHHHHH----cCCcHHHHHHHHHhC-------------------cchhhcc
Q 013369 83 D---VEMVQFLGKQNPESCLVEDNLSMIPLHRAAM----NGQSVDVIRALVSIC-------------------PESLEKL 136 (444)
Q Consensus 83 ~---~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~----~g~~~~~v~~Ll~~~-------------------~~~~~~~ 136 (444)
+ .++++.|++.+....+.+|..|+||||+|+. .|+ .++++.|++.. +.+++..
T Consensus 176 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~-~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 254 (327)
T 1sw6_A 176 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC-SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 254 (327)
T ss_dssp HHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC-HHHHHHHHHHHHHHHHHGGGCCEEEC-----------
T ss_pred ccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc-HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc
Confidence 9 6888888887744447899999999999999 899 99999999874 5567888
Q ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccc
Q 013369 137 TSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLN 216 (444)
Q Consensus 137 d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n 216 (444)
+..|+||||.|+. +++|++. .+|.+|.+|+||||+|++.|+.+++++|+++|++ ++.+|
T Consensus 255 ~~~g~t~L~~a~~------~~~Ll~~--------~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad-------~~~~d 313 (327)
T 1sw6_A 255 NGERKDSILENLD------LKWIIAN--------MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-------PFIAN 313 (327)
T ss_dssp -----CHHHHHCS------HHHHHHH--------TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-------TTCCC
T ss_pred cccCCChhHHHHH------HHHHHHh--------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CcccC
Confidence 9999999999986 8888873 4788999999999999999999999999999888 99999
Q ss_pred cCCCCHHHHHHHc
Q 013369 217 KQGQTALEVCKAN 229 (444)
Q Consensus 217 ~~G~T~L~~A~~~ 229 (444)
.+|+||||+|++.
T Consensus 314 ~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 314 KSGLRPVDFGAGL 326 (327)
T ss_dssp TTSCCGGGGTCC-
T ss_pred CCCCCHHHHHHhc
Confidence 9999999999754
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=9e-31 Score=228.37 Aligned_cols=159 Identities=30% Similarity=0.387 Sum_probs=144.5
Q ss_pred hHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCC
Q 013369 73 TAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSH 152 (444)
Q Consensus 73 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 152 (444)
++|+.||+.|+.++|+.|+++|+++ +.+|.+|+||||+|+..|+ .++++.|++. +.+++.+|.+|+||||+|+.+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~-~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGH-KEVVKLLISK-GADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCC-HHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCC
Confidence 5799999999999999999999998 7999999999999999999 9999999998 45688999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCc
Q 013369 153 LEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSED 232 (444)
Q Consensus 153 ~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~ 232 (444)
.+++++|++ .+.++|.+|.+|+||||+|++.|+.+++++|+++|++ ++.+|.+|+|||++|+..+
T Consensus 83 ~~~v~~Ll~------~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-------~~~~d~~G~TpL~~A~~~g-- 147 (169)
T 4gpm_A 83 KEVVKLLIS------KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-------VNTSDSDGRTPLDLAREHG-- 147 (169)
T ss_dssp HHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHTT--
T ss_pred HHHHHHHHH------CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------ccccCCCCCCHHHHHHHcC--
Confidence 999999999 5667888999999999999999999999999999887 9999999999999999886
Q ss_pred hhHHHHHHHHHHcCCCCCC
Q 013369 233 SVFKEIGLILQEASARSPV 251 (444)
Q Consensus 233 ~~~~~i~~~L~~~ga~~~~ 251 (444)
..+++++|+++||+...
T Consensus 148 --~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 148 --NEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp --CHHHHHHHHTC------
T ss_pred --CHHHHHHHHHCCCCcCC
Confidence 67899999999997653
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=8.1e-32 Score=251.46 Aligned_cols=200 Identities=20% Similarity=0.197 Sum_probs=168.6
Q ss_pred ChhHHhhcCCcHHHHHHHHh----cCCCCchHHhhhcCCCCChHHHHHH---hcCCHHHHHHHHhhCCcc----------
Q 013369 1 MFEEALRKDDHVDEVKLLLS----KIPKLSDDVIRASSSSENNPLLTAC---EYGNHQVAKEIASRWPKL---------- 63 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~----~~~~~~~~~~~~~d~~g~t~Lh~Aa---~~g~~~~v~~Ll~~~~~~---------- 63 (444)
+||.|++.|+ .+.|+.|++ .+.++.... ...|..|.||||+|+ ..|+.+++++|++.+++.
T Consensus 8 ~L~~A~~~g~-~~~v~~ll~~l~~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 8 ILFDIVSRGS-PDGLEGLLSFLLTHKKRLTDEE-FREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHTC-GGGGTTHHHHHHHHTCCTTSGG-GSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHhCC-HHHHHHHHHHHHhcCCCcchhh-hhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 5899999999 996666655 777765432 223467999999999 679999999999987531
Q ss_pred cccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccC--------------CCCCCHHHHHHHcCCcHHHHHHHHHh-
Q 013369 64 AMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVED--------------NLSMIPLHRAAMNGQSVDVIRALVSI- 128 (444)
Q Consensus 64 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d--------------~~g~tpLh~Aa~~g~~~~~v~~Ll~~- 128 (444)
.+..|..|+||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|+..|+ .+++++|++.
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~~ 163 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ-PHIVHYLTENG 163 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC-HHHHHHHHHCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCC-HHHHHHHHhcc
Confidence 2345568999999999999999999999999988 5666 689999999999999 9999999994
Q ss_pred -CcchhhccccCCCCHHHHHHHcCC---------HHHHHHHHHhcccccc-cccccccCCCCCcHHHHHHhcCCHHHHHH
Q 013369 129 -CPESLEKLTSNQDTALHLAVKNSH---------LEAFQVLVKVSKIHNK-EHVFNWKNEDGNTVLHLATFNKSIEIVKA 197 (444)
Q Consensus 129 -~~~~~~~~d~~g~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~-~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~ 197 (444)
.+.+++.+|..|+||||+|+..++ .+++++|++.|.+++. ....+.+|.+|+||||+|++.|+.+++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 367789999999999999998887 7999999997765432 12237799999999999999999999999
Q ss_pred HHhccCC
Q 013369 198 LALESSN 204 (444)
Q Consensus 198 Ll~~ga~ 204 (444)
|+++|++
T Consensus 244 Ll~~g~~ 250 (260)
T 3jxi_A 244 IIRREIA 250 (260)
T ss_dssp HHHHHHH
T ss_pred HHHhCCC
Confidence 9999776
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=7.3e-32 Score=251.77 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=169.9
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHh----hCCccccccc----CCCChHHHHHH---HCCCHHHHHHHhhcCCCC------
Q 013369 35 SSENNPLLTACEYGNHQVAKEIAS----RWPKLAMIKN----QHGQTAVHTVA---ERGDVEMVQFLGKQNPES------ 97 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~----~~~~~~~~~d----~~G~tpLh~Aa---~~g~~~~v~~Ll~~~~~~------ 97 (444)
..+.|+||.|++.|+.+.++.|++ .+.+ ++..+ .+|.||||+|+ ..|+.+++++|++.+++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 568999999999999996555555 7776 33333 77999999999 779999999999987542
Q ss_pred ----ccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccc--------------cCCCCHHHHHHHcCCHHHHHHH
Q 013369 98 ----CLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLT--------------SNQDTALHLAVKNSHLEAFQVL 159 (444)
Q Consensus 98 ----~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~g~~~iv~~L 159 (444)
....|..|.||||+|+..|+ .+++++|++.+ .+++..+ ..|+||||+|+..|+.+++++|
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRC-KHYVELLVEKG-ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCC-HHHHHHHHhCC-CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 13445689999999999999 99999999984 5577777 5899999999999999999999
Q ss_pred HHhcccccccccccccCCCCCcHHHHHHhcCC---------HHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcC
Q 013369 160 VKVSKIHNKEHVFNWKNEDGNTVLHLATFNKS---------IEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANS 230 (444)
Q Consensus 160 l~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~---------~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~ 230 (444)
++.+. .+.+++.+|.+|+||||+|++.++ .+++++|+++|++........+.+|..|.||||+|+..+
T Consensus 160 l~~~~---~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 160 TENGH---KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHCSS---CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred Hhccc---cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 98321 356678899999999999998887 799999999987610000011789999999999999987
Q ss_pred CchhHHHHHHHHHHcCCCCCC
Q 013369 231 EDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 231 ~~~~~~~i~~~L~~~ga~~~~ 251 (444)
..+++++|+++|+....
T Consensus 237 ----~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 237 ----KIGIFQHIIRREIADAA 253 (260)
T ss_dssp ----CHHHHHHHHHHHHHHHC
T ss_pred ----CHHHHHHHHHhCCCccc
Confidence 77899999999886654
No 53
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=238.64 Aligned_cols=199 Identities=18% Similarity=0.223 Sum_probs=180.6
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHH
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRA 112 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 112 (444)
.|..|.||||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++++++.....+..|.||||+|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 356799999999999999999999999988 6788999999999999999999999999999998767777799999999
Q ss_pred HHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCC-
Q 013369 113 AMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKS- 191 (444)
Q Consensus 113 a~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~- 191 (444)
+..|+ .+++++|++. +.+++..+..|.||||+|+..|+.+++++|++ .+..++..|..|.||||+|+..++
T Consensus 84 ~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~------~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 84 TRQGH-LSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIA------KGQDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp HHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHcCC-HHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHh------cCCCccccCCCCCcHHHHHHHhCCh
Confidence 99999 9999999998 45578889999999999999999999999999 556678899999999999996665
Q ss_pred HHHHHHHHhccCCCcccccccccccc-CCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC
Q 013369 192 IEIVKALALESSNSSSIMIRVNTLNK-QGQTALEVCKANSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 192 ~~iv~~Ll~~ga~~~~~~v~~~~~n~-~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
.+++++|++.|++ ++..+. .|.||||+|+..+ ..+++++|++.|++.+.
T Consensus 156 ~~~~~~L~~~~~~-------~~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 156 VDPTRLLLTFNVS-------VNLGDKYHKNTALHWAVLAG----NTTVISLLLEAGANVDA 205 (240)
T ss_dssp STTHHHHHHTTCC-------TTCCCTTTCCCHHHHHHHHT----CHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHhcCCC-------cchhhccCCCcHHHHHHHcC----CHHHHHHHHHcCCCCCC
Confidence 8999999999887 888887 9999999999886 67899999999988764
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.1e-30 Score=228.12 Aligned_cols=170 Identities=16% Similarity=0.173 Sum_probs=150.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcC
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNG 116 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 116 (444)
+.||||.|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 4689999999999999999999999888899999999999999999999999999999988 688999999999999999
Q ss_pred CcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHH
Q 013369 117 QSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVK 196 (444)
Q Consensus 117 ~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~ 196 (444)
+ .+++++|++. +.+++..|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.++++
T Consensus 81 ~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 81 Y-TDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA------RGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp C-HHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred C-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 9 9999999998 45588889999999999999999999999999 55667889999999999999999999999
Q ss_pred HHHhccCCCccccccccccccCCCCH
Q 013369 197 ALALESSNSSSIMIRVNTLNKQGQTA 222 (444)
Q Consensus 197 ~Ll~~ga~~~~~~v~~~~~n~~G~T~ 222 (444)
+|+++|++ +...|..|.||
T Consensus 153 ~L~~~~~~-------~~~~~~~~~~p 171 (172)
T 3v30_A 153 VIENHILK-------LFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHH-------HSCC-------
T ss_pred HHHHHHHH-------HhcccCCCCCC
Confidence 99999765 77888888876
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=245.41 Aligned_cols=188 Identities=20% Similarity=0.214 Sum_probs=125.2
Q ss_pred hhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHH--
Q 013369 2 FEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVA-- 79 (444)
Q Consensus 2 L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa-- 79 (444)
+|.|+..|+ .+.++.+++...+ ..++.+|.+|.||||+|+..|+.+++++|++.++..++..|..|.||||+|+
T Consensus 80 l~~a~~~~~-~~~~~~l~~~~~~---~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 80 AHPELVRRH-LVTFRAMSARLLD---YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp CCHHHHHHH-HHHHHHHCHHHHH---HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred CCHHHHHHH-HHHHHHHHHHHHh---hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 456666666 6666666655432 2345556667777777777777777777777776446666777777777777
Q ss_pred ---HCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHH
Q 013369 80 ---ERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAF 156 (444)
Q Consensus 80 ---~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv 156 (444)
..++.+++++|++.+... ...|..|.||||+|+..|+ .+++++|++. +.+++.+|.+|+||||+|+..|+.+++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~-~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv 232 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGR-VDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIA 232 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCC-HHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 456667777777776555 4566667777777777777 7777777776 344666677777777777777777777
Q ss_pred HHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhc
Q 013369 157 QVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALE 201 (444)
Q Consensus 157 ~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 201 (444)
++|++. .+.+++.+|.+|+||||+|++.|+.+++++|+++
T Consensus 233 ~~Ll~~-----~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 233 GLLLAV-----PSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHTS-----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhc-----CCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 777751 3445566677777777777777777777777766
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=9.7e-30 Score=226.39 Aligned_cols=164 Identities=17% Similarity=0.172 Sum_probs=151.4
Q ss_pred HhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCH
Q 013369 29 VIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIP 108 (444)
Q Consensus 29 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 108 (444)
..+.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 104 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTP 104 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcH
Confidence 3455778899999999999999999999999987 6788999999999999999999999999999987 6889999999
Q ss_pred HHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHh
Q 013369 109 LHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATF 188 (444)
Q Consensus 109 Lh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~ 188 (444)
||+|+..|+ .+++++|++. +.+++..|..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+.
T Consensus 105 L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 105 LMWSIIFGY-SEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLE------LGADISARDLTGLTAEASARI 176 (192)
T ss_dssp HHHHHHHTC-HHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHcCC-HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHH
Confidence 999999999 9999999998 45588889999999999999999999999999 556678899999999999999
Q ss_pred cCCHHHHHHHHhcc
Q 013369 189 NKSIEIVKALALES 202 (444)
Q Consensus 189 ~~~~~iv~~Ll~~g 202 (444)
.++.+++++|++.|
T Consensus 177 ~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 FGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCcHHHHHHHHhcc
Confidence 99999999999873
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.4e-30 Score=243.12 Aligned_cols=191 Identities=20% Similarity=0.223 Sum_probs=172.0
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCc-ccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHH--
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPK-LAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAA-- 113 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~-~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa-- 113 (444)
..+++|.|+..|+.+.++.+++.+.+ .++..|.+|+||||+|+..|+.+++++|++.++...+..|..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 57889999999999999999887654 467889999999999999999999999999998445899999999999999
Q ss_pred ---HcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcC
Q 013369 114 ---MNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNK 190 (444)
Q Consensus 114 ---~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 190 (444)
..++ .++++.|++.+ ...+..|..|+||||+|+.+|+.+++++|++ .+.++|.+|.+|+||||+|+..|
T Consensus 156 ~~~~~~~-~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~------~gad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 156 TLKTQDD-IETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLA------CEADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp CCCSHHH-HHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred Hhhhhhh-HHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCCHHHHHHHCC
Confidence 6688 99999999985 5567778899999999999999999999999 56678889999999999999999
Q ss_pred CHHHHHHHHh-ccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcC
Q 013369 191 SIEIVKALAL-ESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEAS 246 (444)
Q Consensus 191 ~~~iv~~Ll~-~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~g 246 (444)
+.+++++|++ .|++ ++.+|.+|+|||++|+..+ ..+++++|++.+
T Consensus 228 ~~~iv~~Ll~~~gad-------~~~~d~~g~TpL~~A~~~g----~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 228 HKEIAGLLLAVPSCD-------ISLTDRDGSTALMVALDAG----QSEIASMLYSRM 273 (276)
T ss_dssp CHHHHHHHHTSTTCC-------TTCCCTTSCCHHHHHHHHT----CHHHHHHHHHHC
T ss_pred CHHHHHHHHhcCCCC-------CcCcCCCCCCHHHHHHHcC----CHHHHHHHHhcc
Confidence 9999999999 7776 9999999999999999887 677888887764
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.6e-29 Score=218.38 Aligned_cols=160 Identities=22% Similarity=0.300 Sum_probs=145.1
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
....||||.|+..|+.++++.|++.+++ ++..|..|+||||+|+. |+.+++++|++++.++ +.+|..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 3478999999999999999999999988 67889999999999999 9999999999999988 6889999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEI 194 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i 194 (444)
.|+ .+++++|++.+ .+++.+|.+|+||||+|+..|+.+++++|++.|.+ .++.+|..|+||||+|+..++.++
T Consensus 80 ~~~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 80 AGF-LDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS-----NVGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp HTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC-----CTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCC-HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC-----CCCCcCCCCCcHHHHHHHcCCHHH
Confidence 999 99999999985 56888999999999999999999999999995432 257899999999999999999999
Q ss_pred HHHHHhccCC
Q 013369 195 VKALALESSN 204 (444)
Q Consensus 195 v~~Ll~~ga~ 204 (444)
+++|+++|+|
T Consensus 153 ~~~Ll~~GAd 162 (162)
T 1ihb_A 153 VSLMQANGAG 162 (162)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhCCC
Confidence 9999999875
No 59
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=6.3e-29 Score=215.92 Aligned_cols=159 Identities=14% Similarity=0.163 Sum_probs=147.4
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHc
Q 013369 36 SENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMN 115 (444)
Q Consensus 36 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 115 (444)
.|.||||.|+..|+.++++.|++.+++ ++..|..|.||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 489999999999999999999999877 7789999999999999999999999999999888 68899999999999999
Q ss_pred CCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHH
Q 013369 116 GQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIV 195 (444)
Q Consensus 116 g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv 195 (444)
|+ .+++++|++.+ .+++..|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++
T Consensus 80 ~~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 80 GY-TDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE------SGADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp TC-HHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CC-HHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99 99999999984 5588889999999999999999999999999 5566788999999999999999999999
Q ss_pred HHHHhccCC
Q 013369 196 KALALESSN 204 (444)
Q Consensus 196 ~~Ll~~ga~ 204 (444)
++|++++++
T Consensus 152 ~~L~~~~~~ 160 (167)
T 3v31_A 152 QVIESHLLK 160 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998654
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=7.9e-29 Score=215.98 Aligned_cols=158 Identities=24% Similarity=0.315 Sum_probs=146.3
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..+.++||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++++.++ +..|..|.||||+|+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAAL 89 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence 4578999999999999999999999988 6788999999999999999999999999999988 6889999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEI 194 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i 194 (444)
.|+ .+++++|++.+ .+++..|.+|+||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|++.++.++
T Consensus 90 ~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 90 FGH-LEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLK------NGADVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp TTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCC-HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 999 99999999984 5588889999999999999999999999999 456678899999999999999999999
Q ss_pred HHHHHhcc
Q 013369 195 VKALALES 202 (444)
Q Consensus 195 v~~Ll~~g 202 (444)
+++|++.|
T Consensus 162 ~~~L~~~G 169 (169)
T 2y1l_E 162 AEILQKLN 169 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHcC
Confidence 99999874
No 61
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1.6e-29 Score=244.49 Aligned_cols=230 Identities=17% Similarity=0.126 Sum_probs=172.8
Q ss_pred hcCCcHHHHHHHHhcCCCCchHHhh------------hcCCCCChHHHHHHhcCCHHHHHHHHhhCCccccc-ccCCCCh
Q 013369 7 RKDDHVDEVKLLLSKIPKLSDDVIR------------ASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMI-KNQHGQT 73 (444)
Q Consensus 7 ~~g~~~~~v~~Ll~~~~~~~~~~~~------------~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~-~d~~G~t 73 (444)
..|+ .++|+.|++++.+....... .+.....+.+|+|+..+..++++.|++.+.+ ++. +|.+|+|
T Consensus 56 ~~g~-~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~T 133 (327)
T 1sw6_A 56 DNEQ-KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN-LNIPVDEHGNT 133 (327)
T ss_dssp CHHH-HHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCC
T ss_pred cCch-hHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCC-cccccCCCCCc
Confidence 3478 99999999987553221110 0111123446888888899999999999988 566 8999999
Q ss_pred HHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCc--HHHHHHHHHhCcchhhccccCCCCHHHHHHH--
Q 013369 74 AVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQS--VDVIRALVSICPESLEKLTSNQDTALHLAVK-- 149 (444)
Q Consensus 74 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~--~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~-- 149 (444)
|||+|+..|+.++|++|+++|+++ +.+|.+|+||||+|+..|+. .++++.|++....+++.+|..|+||||+|+.
T Consensus 134 pLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~ 212 (327)
T 1sw6_A 134 PLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 212 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHc
Confidence 999999999999999999999998 69999999999999998851 2788888888767799999999999999999
Q ss_pred --cCCHHHHHHHHHhcccc--------------cccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCcccccccc
Q 013369 150 --NSHLEAFQVLVKVSKIH--------------NKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVN 213 (444)
Q Consensus 150 --~g~~~iv~~Ll~~~~~~--------------~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~ 213 (444)
.|+.+++++|++.+... ..+..++.+|..|.||||.|+. +++|+++ +++
T Consensus 213 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---------~~n 277 (327)
T 1sw6_A 213 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN---------MLN 277 (327)
T ss_dssp TSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH---------TTT
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh---------CCC
Confidence 99999999999875321 1267889999999999999986 8899987 288
Q ss_pred ccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCCC----CCCCccc
Q 013369 214 TLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSPV----QQSPQIA 258 (444)
Q Consensus 214 ~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~----~~~p~~~ 258 (444)
.+|..|+||||+|+..+ ..+++++|+++|++.+. +.||...
T Consensus 278 ~~d~~G~TpLh~A~~~g----~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLG----NISIVDALLDYGADPFIANKSGLRPVDF 322 (327)
T ss_dssp CCCTTSCCHHHHHHHHC----CHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred CCCCCCCCHHHHHHHcC----CHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 89999999999999987 67899999999998764 5666554
No 62
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.4e-29 Score=217.17 Aligned_cols=160 Identities=23% Similarity=0.263 Sum_probs=146.3
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHH
Q 013369 34 SSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAA 113 (444)
Q Consensus 34 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa 113 (444)
|.+|.||||.|+..|+.++++.|++.++...+..|..|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHH
Confidence 4678999999999999999999999877667788899999999999999999999999999988 789999999999999
Q ss_pred HcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHH
Q 013369 114 MNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIE 193 (444)
Q Consensus 114 ~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 193 (444)
..|+ .+++++|++. +.+++..|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+. ++.+
T Consensus 84 ~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 84 SYGH-YEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ------HGADPTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp HTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCTGGGSCT-TCHH
T ss_pred HcCc-HHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCChhHhHhc-CChH
Confidence 9999 9999999998 45588889999999999999999999999999 556778899999999999877 8999
Q ss_pred HHHHHHhccC
Q 013369 194 IVKALALESS 203 (444)
Q Consensus 194 iv~~Ll~~ga 203 (444)
++++|+++|+
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999999875
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.2e-28 Score=215.14 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=146.4
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .+.++.|++.++.. .+.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 5 ~L~~A~~~g~-~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 5 SIHQLAAQGE-LDQLKEHLRKGDNL----VNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLAST 78 (172)
T ss_dssp CHHHHHHTTC-HHHHHHHHTTCSGG----GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHH
T ss_pred hHHHHHHcCC-HHHHHHHHHcCccc----ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHHH
Confidence 7999999999 99999999998753 455668899999999999999999999999988 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++.++ +.+|..|.||||+|+..|+ .+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNH-VKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp TTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999998 7899999999999999999 99999999984 568889999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcH
Q 013369 161 KVSKIHNKEHVFNWKNEDGNTV 182 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~G~T~ 182 (444)
+++.+ +...+..|.||
T Consensus 156 ~~~~~------~~~~~~~~~~p 171 (172)
T 3v30_A 156 NHILK------LFQSNLVPADP 171 (172)
T ss_dssp HHHHH------HSCC-------
T ss_pred HHHHH------HhcccCCCCCC
Confidence 96553 44566667665
No 64
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=5e-29 Score=221.76 Aligned_cols=164 Identities=19% Similarity=0.123 Sum_probs=150.8
Q ss_pred ccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCC
Q 013369 63 LAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDT 142 (444)
Q Consensus 63 ~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t 142 (444)
+.+.+|..|+||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++.+ .+++..|..|.|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g-~~~~~~~~~g~t 103 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNR-LGIAEKLLSKG-SNVNTKDFSGKT 103 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHHT-CCTTCCCTTSCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCC-HHHHHHHHHCC-CCCCCCCCCCCc
Confidence 35678999999999999999999999999999887 6889999999999999999 99999999985 458888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCH
Q 013369 143 ALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTA 222 (444)
Q Consensus 143 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~ 222 (444)
|||+|+..|+.+++++|++ .+..++.+|..|+||||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~ 170 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLE------HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD-------ISARDLTGLTA 170 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCBCTTSCBH
T ss_pred HHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCCH
Confidence 9999999999999999999 5567788999999999999999999999999999887 89999999999
Q ss_pred HHHHHHcCCchhHHHHHHHHHHcC
Q 013369 223 LEVCKANSEDSVFKEIGLILQEAS 246 (444)
Q Consensus 223 L~~A~~~~~~~~~~~i~~~L~~~g 246 (444)
+++|+..+ ..+++++|.+.|
T Consensus 171 l~~A~~~~----~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 171 EASARIFG----RQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHTT----CHHHHHHHHHHH
T ss_pred HHHHHHhC----cHHHHHHHHhcc
Confidence 99999887 667888887754
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=7.2e-29 Score=218.29 Aligned_cols=169 Identities=17% Similarity=0.184 Sum_probs=152.8
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
+++.++||.|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|++++.++ +..|..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 458899999999999999999999987778899999999999999999999999999999998 6889999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEI 194 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~i 194 (444)
.|+ .+++++|++.+ .+++..|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|.||||+|+..++.++
T Consensus 82 ~~~-~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~ 153 (179)
T 3f6q_A 82 HGH-RDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVA------NGALVSICNKYGEMPVDKAKAPLRELL 153 (179)
T ss_dssp TTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCSSBCCTTSCCGGGGSCHHHHHHH
T ss_pred cCC-HHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCcchhccCCCCcHHHHHHHHHHHH
Confidence 999 99999999984 5688899999999999999999999999999 556778899999999999999999999
Q ss_pred HHHHHhccCCCccccccccccccCC
Q 013369 195 VKALALESSNSSSIMIRVNTLNKQG 219 (444)
Q Consensus 195 v~~Ll~~ga~~~~~~v~~~~~n~~G 219 (444)
+++|++.|++ ++..+.++
T Consensus 154 ~~~L~~~g~~-------~~~~~~~~ 171 (179)
T 3f6q_A 154 RERAEKMGQN-------LNRIPYKD 171 (179)
T ss_dssp HHHHHHTTCC-------CSCBCCCC
T ss_pred HHHHHHhhcC-------cccCCccc
Confidence 9999999888 55555443
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.3e-28 Score=212.64 Aligned_cols=154 Identities=23% Similarity=0.291 Sum_probs=143.1
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++++.|++.+.++ +..|..|.||||+|+. |+.+++++|++.+++ ++.+|..|.||||+|+.
T Consensus 8 ~L~~A~~~g~-~~~v~~Ll~~~~~~-----~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 8 ELASAAARGD-LEQLTSLLQNNVNV-----NAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp HHHHHHHHTC-HHHHHHHTTSCCCT-----TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHhCCCCc-----cccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 5899999999 99999999998775 3445789999999999 999999999999988 67889999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|++++.++ +.+|..|.||||+|+..|+ .+++++|++++++.++..|..|+||||+|+.+|+.+++++|+
T Consensus 80 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGH-LRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC-HHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999988 7899999999999999999 999999999988778899999999999999999999999999
Q ss_pred Hhcc
Q 013369 161 KVSK 164 (444)
Q Consensus 161 ~~~~ 164 (444)
++|+
T Consensus 158 ~~GA 161 (162)
T 1ihb_A 158 ANGA 161 (162)
T ss_dssp HTC-
T ss_pred HhCC
Confidence 9664
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.3e-28 Score=208.78 Aligned_cols=154 Identities=23% Similarity=0.268 Sum_probs=139.9
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcC
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNG 116 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 116 (444)
+.||||.|+..|+.++++.|++..+...+..|..|.||||+ +..|+.+++++|+++|.++ +.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcC
Confidence 56899999999999999999998544577889999999999 9999999999999999888 688999999999999999
Q ss_pred CcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHH
Q 013369 117 QSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVK 196 (444)
Q Consensus 117 ~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~ 196 (444)
+ .+++++|++.+ .+++..|.+|+||||+|+.+|+.+++++|++ . .+++.+|.+|+||||+|+..++.++++
T Consensus 80 ~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~-~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 80 F-LDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAA------E-SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp C-HHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT------T-SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred c-HHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHh------c-cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9 99999999985 5588889999999999999999999999998 4 667889999999999999999999999
Q ss_pred HHHhc
Q 013369 197 ALALE 201 (444)
Q Consensus 197 ~Ll~~ 201 (444)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99875
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=5.2e-28 Score=207.12 Aligned_cols=151 Identities=19% Similarity=0.259 Sum_probs=134.7
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcC
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNG 116 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 116 (444)
..||||.|+..|+.+++++|++.+++.. .|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 4689999999999999999999988743 6888999999999999999999999999887 688899999999999999
Q ss_pred CcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHH
Q 013369 117 QSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVK 196 (444)
Q Consensus 117 ~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~ 196 (444)
+ .+++++|++. +.+++..|..|+||||+|+.+|+.+++++|++ .+.+++.+|..|+||||+|+..|+.++++
T Consensus 79 ~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 79 H-ANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIK------YGADVHTQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp C-HHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred h-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 9 9999999997 45578889999999999999999999999998 45667788999999999999999999998
Q ss_pred HH
Q 013369 197 AL 198 (444)
Q Consensus 197 ~L 198 (444)
+|
T Consensus 151 ~L 152 (153)
T 1awc_B 151 IL 152 (153)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.3e-30 Score=238.97 Aligned_cols=198 Identities=18% Similarity=0.137 Sum_probs=161.7
Q ss_pred HHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcC
Q 013369 15 VKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQN 94 (444)
Q Consensus 15 v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 94 (444)
|+.||+++.+... .+..+.++.||||.|+..|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~~~~~~~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRK--ARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCC--CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCcc--ccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 4677777666432 223446688999999999999999999999987 6789999999999999999999999999999
Q ss_pred CCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccc-cCCCCHHHHH--HHcCCHHHHHHHHHhccccccccc
Q 013369 95 PESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLT-SNQDTALHLA--VKNSHLEAFQVLVKVSKIHNKEHV 171 (444)
Q Consensus 95 ~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A--~~~g~~~iv~~Ll~~~~~~~~~~~ 171 (444)
+++ +.+|..|.||||+|+..|+ .+++++|++.+. +++..+ .+|+||||+| +..|+.+++++|++.| .+
T Consensus 78 a~~-n~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g------a~ 148 (229)
T 2vge_A 78 ANV-NSPDSHGWTPLHCAASCND-TVICMALVQHGA-AIFATTLSDGATAFEKCDPYREGYADCATYLADVE------QS 148 (229)
T ss_dssp CCT-TCCCTTCCCHHHHHHHTTC-HHHHHHHHTTTC-CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH------HH
T ss_pred CCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC------CC
Confidence 998 7899999999999999999 999999999854 466665 7999999999 9999999999999954 45
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCc
Q 013369 172 FNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSED 232 (444)
Q Consensus 172 ~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~ 232 (444)
++.+|..|.||+|.++..... ++|++.|++ ++++.+|.+|+||||+|+..+..
T Consensus 149 ~~~~~~~~~~~l~~~~~~~~~---~~ll~~ga~-----~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 149 MGLMNSGAVYALWDYSAEFGD---ELSFREGES-----VTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp TTTSGGGEEEESSCBCCSSTT---BCCBCTTCE-----EEEEESSCTTCSSEEEEEETTEE
T ss_pred cccccCCchHHHHHHhhcccc---ccCcccccc-----ccccccCCCcccHHHHHHHcCCc
Confidence 677899999999976555433 577777664 45888999999999999988733
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=7.6e-28 Score=209.06 Aligned_cols=159 Identities=19% Similarity=0.242 Sum_probs=145.3
Q ss_pred CCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHH
Q 013369 70 HGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVK 149 (444)
Q Consensus 70 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 149 (444)
+|.||||.|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+ .+++++|++. +.+++..|..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQ-IAVVEFLLQN-GADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCC-HHHHHHHHHc-CCCCCCcCCCCCcHHHHHHH
Confidence 5899999999999999999999999886 7899999999999999999 9999999998 55688889999999999999
Q ss_pred cCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHc
Q 013369 150 NSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKAN 229 (444)
Q Consensus 150 ~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~ 229 (444)
.|+.+++++|++ .+..++.+|..|+||||+|+..++.+++++|+++|++ ++.+|..|.||+++|+..
T Consensus 79 ~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 79 KGYTDIVKMLLD------CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-------PTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HTCHHHHHHHHH------HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHH------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHc
Confidence 999999999999 4566788999999999999999999999999999887 899999999999999988
Q ss_pred CCchhHHHHHHHHHHcCCC
Q 013369 230 SEDSVFKEIGLILQEASAR 248 (444)
Q Consensus 230 ~~~~~~~~i~~~L~~~ga~ 248 (444)
+ ..+++++|.+++++
T Consensus 146 ~----~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 146 G----YRSVQQVIESHLLK 160 (167)
T ss_dssp T----CHHHHHHHHHHHHH
T ss_pred C----cHHHHHHHHHHHHH
Confidence 7 56777777766543
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1e-27 Score=208.89 Aligned_cols=161 Identities=28% Similarity=0.376 Sum_probs=145.1
Q ss_pred cccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHH
Q 013369 66 IKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALH 145 (444)
Q Consensus 66 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 145 (444)
.....+.||||.|++.|+.+++++|++++.++ +.+|..|.||||+|+..|+ .+++++|++. +.+++..|..|+||||
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGH-LEIVEVLLKN-GADVNAVDHAGMTPLR 85 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHc-CCCCCccCCCCCCHHH
Confidence 34566789999999999999999999999988 6889999999999999999 9999999998 4558888999999999
Q ss_pred HHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHH
Q 013369 146 LAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEV 225 (444)
Q Consensus 146 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~ 225 (444)
+|+..|+.+++++|++ .+..++.+|.+|+||||+|++.++.+++++|+++|++ ++.+|..|.||+++
T Consensus 86 ~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~l~~ 152 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLK------NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-------VNAQDKFGKTAFDI 152 (169)
T ss_dssp HHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHH
Confidence 9999999999999999 5566788999999999999999999999999999887 89999999999999
Q ss_pred HHHcCCchhHHHHHHHHHHcC
Q 013369 226 CKANSEDSVFKEIGLILQEAS 246 (444)
Q Consensus 226 A~~~~~~~~~~~i~~~L~~~g 246 (444)
|+..+ ..+++++|++.|
T Consensus 153 A~~~~----~~~~~~~L~~~G 169 (169)
T 2y1l_E 153 SIDNG----NEDLAEILQKLN 169 (169)
T ss_dssp HHHTT----CHHHHHHHHTC-
T ss_pred HHHhC----CHHHHHHHHHcC
Confidence 99886 678888888765
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.5e-27 Score=209.81 Aligned_cols=164 Identities=22% Similarity=0.267 Sum_probs=148.9
Q ss_pred CCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHH
Q 013369 69 QHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAV 148 (444)
Q Consensus 69 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 148 (444)
.++.+|||.|+..|+.+++++|++.++...+..|..|.||||+|+..|+ .+++++|++. +.+++..|..|+||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGR-SAVVEMLIMR-GARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCc-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHH
Confidence 4678999999999999999999999776668999999999999999999 9999999998 4568888999999999999
Q ss_pred HcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHH
Q 013369 149 KNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKA 228 (444)
Q Consensus 149 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~ 228 (444)
..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++++|+++|++ ++.+|..|.||+++|+.
T Consensus 81 ~~~~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 81 SHGHRDIVQKLLQ------YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL-------VSICNKYGEMPVDKAKA 147 (179)
T ss_dssp HTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------SSBCCTTSCCGGGGSCH
T ss_pred HcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------cchhccCCCCcHHHHHH
Confidence 9999999999999 5667888999999999999999999999999999887 99999999999999976
Q ss_pred cCCchhHHHHHHHHHHcCCCCCC
Q 013369 229 NSEDSVFKEIGLILQEASARSPV 251 (444)
Q Consensus 229 ~~~~~~~~~i~~~L~~~ga~~~~ 251 (444)
. ...++.+.|.+.|++.+.
T Consensus 148 ~----~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 148 P----LRELLRERAEKMGQNLNR 166 (179)
T ss_dssp H----HHHHHHHHHHHTTCCCSC
T ss_pred H----HHHHHHHHHHHhhcCccc
Confidence 5 488999999999998875
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=5e-28 Score=209.81 Aligned_cols=161 Identities=27% Similarity=0.276 Sum_probs=144.4
Q ss_pred ccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHH
Q 013369 67 KNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHL 146 (444)
Q Consensus 67 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 146 (444)
.|.+|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+ .+++++|++.+ .+++..|.+|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g-~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR-VSVVEYLLQHG-ADVHAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcCh-HHHHHHHHhcC-CCCCccCCCCCCHHHH
Confidence 467889999999999999999999997776667888899999999999999 99999999984 5588899999999999
Q ss_pred HHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHH
Q 013369 147 AVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVC 226 (444)
Q Consensus 147 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A 226 (444)
|+..|+.+++++|++ .+..++.+|..|+||||+|+..++.+++++|+++|++ ++.+|.+|+||+++|
T Consensus 82 A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~l~~a 148 (165)
T 3twr_A 82 ACSYGHYEVAELLVK------HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-------PTKKNRDGNTPLDLV 148 (165)
T ss_dssp HHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCTGGGS
T ss_pred HHHcCcHHHHHHHHh------CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCChhHhH
Confidence 999999999999999 5667888999999999999999999999999999887 899999999999998
Q ss_pred HHcCCchhHHHHHHHHHHcCC
Q 013369 227 KANSEDSVFKEIGLILQEASA 247 (444)
Q Consensus 227 ~~~~~~~~~~~i~~~L~~~ga 247 (444)
.. + ..+++++|.+.|+
T Consensus 149 ~~-~----~~~i~~~L~~~gA 164 (165)
T 3twr_A 149 KD-G----DTDIQDLLRGDAA 164 (165)
T ss_dssp CT-T----CHHHHHHHHTC--
T ss_pred hc-C----ChHHHHHHhhccc
Confidence 65 3 4589999998876
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.4e-27 Score=202.01 Aligned_cols=148 Identities=21% Similarity=0.321 Sum_probs=138.2
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
+||.|++.|+ .++++.|++.+++.. .|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 5 ~L~~A~~~g~-~~~v~~Ll~~g~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 5 KLLEAARAGQ-DDEVRILMANGAPFT------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHTC-HHHHHHHHHHTCCCC------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 5899999999 999999999988754 347799999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVL 159 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~L 159 (444)
.|+.+++++|+++++++ +.+|..|.||||+|+..|+ .+++++|+++ +.+++.+|..|+||||+|+.+|+.+++++|
T Consensus 77 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 77 EGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNH-QEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC-HHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999998 6889999999999999999 9999999998 456888999999999999999999999987
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.8e-28 Score=224.99 Aligned_cols=185 Identities=12% Similarity=0.061 Sum_probs=128.2
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..|.||||.|+..|+.+.++.|+++|.+. + .+..|.||||.|+..|+.+++++|++.++++ +.+|..|.||||+|+.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRV-K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCc-c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 46999999999999999999999999884 3 4578999999999999999999999999987 7899999999999999
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCC-cHHHHH--HhcCC
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGN-TVLHLA--TFNKS 191 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~-T~Lh~A--~~~~~ 191 (444)
.|+ .+++++|+++ +.+++.+|.+|+||||+|+.+|+.+++++|++ .+.+++.+|..|. ||||+| +..|+
T Consensus 80 ~g~-~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 80 AGH-TEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVE------SGAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HTC-HHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred cCC-HHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCcceecCCCCcchHHHHHHhhhcc
Confidence 999 9999999998 45688999999999999999999999999999 5566778888877 999999 78899
Q ss_pred HHHHHHHHhccCCCcc--ccccccccccCCCCHHHHHHHcC
Q 013369 192 IEIVKALALESSNSSS--IMIRVNTLNKQGQTALEVCKANS 230 (444)
Q Consensus 192 ~~iv~~Ll~~ga~~~~--~~v~~~~~n~~G~T~L~~A~~~~ 230 (444)
.+++++|+++|++... .+......+..++++++++...+
T Consensus 152 ~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 152 TQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp CCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred HHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC
Confidence 9999999999876211 01112233666777777665544
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1e-26 Score=199.53 Aligned_cols=150 Identities=21% Similarity=0.319 Sum_probs=137.7
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .+.++.|++. ... ..+..|..|.||||+ +..|+.+++++|++.+++ ++..|..|.||||+|+.
T Consensus 5 ~L~~A~~~g~-~~~v~~ll~~-~~~---~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 5 RLSGAAARGD-VQEVRRLLHR-ELV---HPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHTC-HHHHHHHHHT-TCC---CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhCC-HHHHHHHHHh-hCc---CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH
Confidence 5899999999 9999999998 311 133455789999999 999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLV 160 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll 160 (444)
.|+.+++++|+++|.++ +.+|..|.||||+|+..|+ .+++++|++. .+++..|.+|.||||+|+..|+.+++++|+
T Consensus 78 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGH-TAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTC-HHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhCh-HHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 99999999999999988 7899999999999999999 9999999998 668889999999999999999999999998
Q ss_pred H
Q 013369 161 K 161 (444)
Q Consensus 161 ~ 161 (444)
+
T Consensus 154 ~ 154 (156)
T 1bd8_A 154 G 154 (156)
T ss_dssp T
T ss_pred h
Confidence 7
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.4e-29 Score=230.57 Aligned_cols=182 Identities=13% Similarity=0.068 Sum_probs=156.8
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .++|+.|++.+.+++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+.
T Consensus 24 ~L~~A~~~g~-~~~v~~Ll~~g~~~~-----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 24 LLLDAALTGE-LEVVQQAVKEMNDPS-----QPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp HHHHHHHHTC-HHHHHHHHHHSSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHhcCCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 5899999999 999999999988753 4567899999999999999999999999988 67899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHH--HHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRA--AMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQV 158 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A--a~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~ 158 (444)
.|+.+++++|+++|+++....+.+|.||||+| +..|+ .+++++|++. +.+++..|..|.|+++.++..+.. ++
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~-~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~~---~~ 171 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY-ADCATYLADV-EQSMGLMNSGAVYALWDYSAEFGD---EL 171 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH-HHHHHHHHHH-HHHTTTSGGGEEEESSCBCCSSTT---BC
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh-HHHHHHHHHc-CCCcccccCCchHHHHHHhhcccc---cc
Confidence 99999999999999998433457999999999 99999 9999999998 456888899999999976555433 45
Q ss_pred HHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHH
Q 013369 159 LVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKAL 198 (444)
Q Consensus 159 Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~L 198 (444)
|++.|.+ ..++.+|.+|+||||+|++.|+.++++.+
T Consensus 172 ll~~ga~----~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 172 SFREGES----VTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp CBCTTCE----EEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred Ccccccc----ccccccCCCcccHHHHHHHcCCcceeehh
Confidence 5654322 23778999999999999999999888653
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=4.9e-28 Score=237.35 Aligned_cols=152 Identities=15% Similarity=0.091 Sum_probs=121.3
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcc--cccccCCCChHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKL--AMIKNQHGQTAVHTV 78 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~G~tpLh~A 78 (444)
|||.|++.|+ .++|+.|++.+..... ....|..|.||||+||..|+.++|++|++++++. .+..+.+ .||||+|
T Consensus 95 ~Lh~Aa~~G~-~e~v~~Ll~~ga~~~~--~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 95 ICFVAAITGC-SSALDTLCLLLTSDEI--VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHCC-HHHHHHHTTC--CCSS--CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCcHHH--HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 6899999999 9999999998762110 0011234788999999999999999999999741 1222233 8999999
Q ss_pred HHCCCHHHHHHHhhcCCCCccc--cCCCCCCHHHHHH-HcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHH
Q 013369 79 AERGDVEMVQFLGKQNPESCLV--EDNLSMIPLHRAA-MNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEA 155 (444)
Q Consensus 79 a~~g~~~~v~~Ll~~~~~~~~~--~d~~g~tpLh~Aa-~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~i 155 (444)
|..|+.++|++|+++|+++ +. .|..|.||||+|+ ..|+ .+++++|++.+ . .|.||||+|+.+|+.++
T Consensus 171 a~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~-~eiv~~Ll~~g-a-------~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGH-HNVINFLLDCP-V-------MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCC-HHHHHHHTTSH-H-------HHHHHHHCTTTTTTTTH
T ss_pred HHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCC-HHHHHHHHhCC-C-------ccchHHHHHHHCCCHHH
Confidence 9999999999999999886 34 7788999999999 9999 99999999853 2 27899999999999999
Q ss_pred HHHHHHhcccc
Q 013369 156 FQVLVKVSKIH 166 (444)
Q Consensus 156 v~~Ll~~~~~~ 166 (444)
+++|++.|.+.
T Consensus 241 v~lL~~~ga~~ 251 (376)
T 2aja_A 241 NPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhcCccc
Confidence 99999977653
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=7.4e-27 Score=215.38 Aligned_cols=213 Identities=16% Similarity=0.122 Sum_probs=150.3
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAE 80 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~ 80 (444)
|||.|++.|+ .+.++.|++.+.++... ..|.||||.|+..|+.++++.|++.+++ ++.+|..|.||||+|+.
T Consensus 8 ~L~~a~~~~~-~~~~~~ll~~g~~~~~~------~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 8 SLPPGKRTNL-RKTGSERIAHGMRVKFN------PLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHH
T ss_pred cCchhhhhhh-HHHHHHHhccCCCcccC------chhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 7999999999 99999999999886532 5689999999999999999999999987 78899999999999999
Q ss_pred CCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCC-CHHHHH--HHcCCHHHHH
Q 013369 81 RGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQD-TALHLA--VKNSHLEAFQ 157 (444)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A--~~~g~~~iv~ 157 (444)
.|+.+++++|+++++++ +.+|..|.||||+|+..|+ .+++++|++++ .+++..+..|. ||||+| +..|+.++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNN-VQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTC-HHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC-HHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 99999999999999998 7899999999999999999 99999999985 45777777666 999999 8889999999
Q ss_pred HHHHhcccccc---cccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHH
Q 013369 158 VLVKVSKIHNK---EHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCK 227 (444)
Q Consensus 158 ~Ll~~~~~~~~---~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~ 227 (444)
+|++.+.+.+. +......|..+.++++++.+.|. +++.|.+.+.+.. .-......++.|.+|.++..
T Consensus 157 ~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~-~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 157 FLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEI-EWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp HHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCS-SEEEEEETTEEEEEEGGGEE
T ss_pred HHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCC-CEEEEEECCcEEEeehHHee
Confidence 99998776532 22233458899999999988886 4444444433200 00113355677888887764
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=2.1e-25 Score=187.01 Aligned_cols=131 Identities=18% Similarity=0.200 Sum_probs=98.1
Q ss_pred cccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccC-CCC
Q 013369 64 AMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSN-QDT 142 (444)
Q Consensus 64 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~-g~t 142 (444)
++..|..|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+. |+ .+++++|++.+ .+++.+|.. |+|
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~-~~~v~~Ll~~g-~~~~~~~~~~g~t 80 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GS-AQVAELLLLHG-AEPNCADPATLTR 80 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SC-HHHHHHHHHHT-CCSSCCBTTTTBC
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CC-HHHHHHHHHCC-CCCCCcCCCCCCC
Confidence 4567777777777777777777777777777766 5677777777777777 77 77777777764 346667777 778
Q ss_pred HHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 143 ALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 143 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
|||+|+..|+.+++++|++ .+.+++.+|..|+||||+|++.++.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHR------AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8888887778888887777 4455667777888888888888888888888877664
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.1e-25 Score=193.45 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=88.5
Q ss_pred cccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCC-HH
Q 013369 66 IKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDT-AL 144 (444)
Q Consensus 66 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t-~L 144 (444)
..+..|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+ .|+ .+++++|++. +.+++.+|..|+| ||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~-~~~v~~Ll~~-g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGS-ARVAELLLLH-GAEPNCADPATLTRPV 82 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTC-HHHHHHHHTT-TCCCCCCCTTTCCCHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCC-HHHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 44566677777777777777777777776665 566667777777764 666 7777777766 3446666777777 77
Q ss_pred HHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHH
Q 013369 145 HLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALE 224 (444)
Q Consensus 145 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~ 224 (444)
|+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++++|+++|++ ++.+|..|.||.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHR------AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG-------TRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHTCHHHHHHHHH------HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------------
T ss_pred HHHHHCCCHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-------CCccCcCcCcccc
Confidence 77777777777777777 3445666777788888888887888888888877666 7777777777766
Q ss_pred HH
Q 013369 225 VC 226 (444)
Q Consensus 225 ~A 226 (444)
-+
T Consensus 150 ~~ 151 (156)
T 1bi7_B 150 GP 151 (156)
T ss_dssp --
T ss_pred cC
Confidence 43
No 82
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=5.8e-27 Score=229.70 Aligned_cols=155 Identities=13% Similarity=0.107 Sum_probs=129.3
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCcc--cccccCCCChHHHHHHHCCCHHHHHHHhhcCCCC--ccccCCCCCCHH
Q 013369 34 SSSENNPLLTACEYGNHQVAKEIASRWPKL--AMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPES--CLVEDNLSMIPL 109 (444)
Q Consensus 34 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpL 109 (444)
+.+++||||+|+..|+.+++++|++.++.. ....|..|.||||+||..|+.++|++|++++++. .+..+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 345679999999999999999999998721 1234567889999999999999999999999752 1233333 8999
Q ss_pred HHHHHcCCcHHHHHHHHHhCcchhhc--cccCCCCHHHHHH-HcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHH
Q 013369 110 HRAAMNGQSVDVIRALVSICPESLEK--LTSNQDTALHLAV-KNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLA 186 (444)
Q Consensus 110 h~Aa~~g~~~~~v~~Ll~~~~~~~~~--~d~~g~t~Lh~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 186 (444)
|+|+..|+ .+++++|++++++ ++. .|.+|.||||+|+ .+|+.+++++|++.|. .|+||||+|
T Consensus 168 h~Aa~~G~-~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------------~~~taL~~A 232 (376)
T 2aja_A 168 RLAAENGH-LHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------------MLAYAEIHE 232 (376)
T ss_dssp HHHHHTTC-HHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------------HHHHHHHCT
T ss_pred HHHHHCCC-HHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------------ccchHHHHH
Confidence 99999999 9999999999654 444 7888999999999 9999999999998432 278999999
Q ss_pred HhcCCHHHHHHHHhccCC
Q 013369 187 TFNKSIEIVKALALESSN 204 (444)
Q Consensus 187 ~~~~~~~iv~~Ll~~ga~ 204 (444)
++.|+.+++++|+++|++
T Consensus 233 a~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp TTTTTTTHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCcc
Confidence 999999999999999775
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.5e-25 Score=198.47 Aligned_cols=157 Identities=9% Similarity=0.036 Sum_probs=113.7
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCH----HHHHHHhhcCCCCccccCCCCCCHHHHH
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDV----EMVQFLGKQNPESCLVEDNLSMIPLHRA 112 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 112 (444)
+.++|+.|++.|+.+.++.+++.+.+. ..+..|+||||+|+..|+. +++++|+++|+++ +.+|.+|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 456778888888888887777776542 1236678888888877764 4788888888777 67777788888888
Q ss_pred HHcCCc-----HHHHHHHHHhCcchhhccccCCC-CHHHHHHHcC-----CHHHHHHHHHhcccccccccccccCCCCCc
Q 013369 113 AMNGQS-----VDVIRALVSICPESLEKLTSNQD-TALHLAVKNS-----HLEAFQVLVKVSKIHNKEHVFNWKNEDGNT 181 (444)
Q Consensus 113 a~~g~~-----~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~g-----~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T 181 (444)
+..|+. .+++++|+++ +.+++.+|..|+ ||||+|+..+ +.+++++|++. .+.+++.+|..|+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-----~gad~~~~d~~G~T 156 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-----SGLQLLIKDKWGLT 156 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-----TTCCTTCCCTTSCC
T ss_pred HHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-----cCCCCcccCCCCCC
Confidence 777651 3667788876 455777788887 8888887744 34577888761 34556778888888
Q ss_pred HHHHHHhcCCHHHHHHHHhcc
Q 013369 182 VLHLATFNKSIEIVKALALES 202 (444)
Q Consensus 182 ~Lh~A~~~~~~~iv~~Ll~~g 202 (444)
|||+|++.++.+++++|.+..
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 888888888888888887763
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.6e-25 Score=190.09 Aligned_cols=143 Identities=17% Similarity=0.152 Sum_probs=116.6
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCC-HHHH
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMI-PLHR 111 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t-pLh~ 111 (444)
.+..|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+|+ .|+.+++++|++++.++ +.+|..|.| |||+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD 84 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 346799999999999999999999999987 6789999999999985 99999999999999988 789999999 9999
Q ss_pred HHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHH
Q 013369 112 AAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLA 186 (444)
Q Consensus 112 Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 186 (444)
|+..|+ .+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++ .+..++.+|..|.||.+-+
T Consensus 85 A~~~~~-~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGF-LDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRA------AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTC-HHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS------CC-----------------
T ss_pred HHHCCC-HHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHH------cCCCCCccCcCcCcccccC
Confidence 999999 9999999998 45688899999999999999999999999998 5667888999999998754
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=6.8e-25 Score=183.87 Aligned_cols=129 Identities=18% Similarity=0.219 Sum_probs=119.9
Q ss_pred hhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCC-CCCHH
Q 013369 31 RASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNL-SMIPL 109 (444)
Q Consensus 31 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-g~tpL 109 (444)
+..|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+. |+.+++++|+++++++ +.+|.. |.|||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L 82 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPV 82 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHH
Confidence 34567899999999999999999999999987 67899999999999999 9999999999999998 688888 99999
Q ss_pred HHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Q 013369 110 HRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSK 164 (444)
Q Consensus 110 h~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 164 (444)
|+|+..|+ .+++++|++.+ .+++.+|..|+||||+|+.+|+.+++++|+++|+
T Consensus 83 ~~A~~~~~-~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 83 HDAAREGF-LDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTC-HHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHcCC-HHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999 99999999985 5588899999999999999999999999999764
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-23 Score=172.46 Aligned_cols=124 Identities=34% Similarity=0.504 Sum_probs=65.5
Q ss_pred CChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHc
Q 013369 71 GQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKN 150 (444)
Q Consensus 71 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 150 (444)
|+||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++.+ .+++..|..|.||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGH-LEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCc-HHHHHHHHHcC-CCCcccCCCCCcHHHHHHHc
Confidence 455555555555555555555554444 3444555555555555555 55555555542 23444455555555555555
Q ss_pred CCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccC
Q 013369 151 SHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESS 203 (444)
Q Consensus 151 g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga 203 (444)
|+.+++++|++ .+..++.+|.+|+||||+|+..++.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLE------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 55555555555 233344555555555555555555555555555554
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.5e-24 Score=191.92 Aligned_cols=155 Identities=17% Similarity=0.055 Sum_probs=131.2
Q ss_pred CChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcH----HHHHHHHHhCcchhhccccCCCCHHHH
Q 013369 71 GQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSV----DVIRALVSICPESLEKLTSNQDTALHL 146 (444)
Q Consensus 71 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 146 (444)
++++||.|++.|+.+.++.+++.+.+. ..+..|+||||+|+..|+ . +++++|+++ +.+++.+|.+|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~-~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNN-DEARYKISMFLINK-GADIKSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSC-HHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCC-cchHHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Confidence 568999999999999999999987543 334779999999999997 5 489999998 56699999999999999
Q ss_pred HHHcCC------HHHHHHHHHhcccccccccccccCCCCC-cHHHHHHhcC-----CHHHHHHHHh-ccCCCcccccccc
Q 013369 147 AVKNSH------LEAFQVLVKVSKIHNKEHVFNWKNEDGN-TVLHLATFNK-----SIEIVKALAL-ESSNSSSIMIRVN 213 (444)
Q Consensus 147 A~~~g~------~~iv~~Ll~~~~~~~~~~~~~~~d~~G~-T~Lh~A~~~~-----~~~iv~~Ll~-~ga~~~~~~v~~~ 213 (444)
|+..++ .+++++|++ .|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++ ++
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~------~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-------~~ 148 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLE------KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-------LL 148 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH------TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-------TT
T ss_pred HHHcCCcchhhHHHHHHHHHH------CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-------Cc
Confidence 999987 688999999 6677889999999 9999999944 4579999999 8887 99
Q ss_pred ccccCCCCHHHHHHHcCCchhHHHHHHHH
Q 013369 214 TLNKQGQTALEVCKANSEDSVFKEIGLIL 242 (444)
Q Consensus 214 ~~n~~G~T~L~~A~~~~~~~~~~~i~~~L 242 (444)
.+|..|+||||+|++.+.....+.+.++.
T Consensus 149 ~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 149 IKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999887444343333333
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=9.6e-24 Score=176.81 Aligned_cols=123 Identities=21% Similarity=0.313 Sum_probs=85.5
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..+.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 3466777777777777777777777666 4566777777777777777777777777777665 5666677777777777
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVK 161 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~ 161 (444)
.|+ .+++++|++++ .+++..|.+|+||||+|+.+|+.+++++|++
T Consensus 90 ~~~-~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 90 IGH-LEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCC-HHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 777 77777777663 3456666667777777777777777776665
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.8e-23 Score=170.69 Aligned_cols=125 Identities=29% Similarity=0.451 Sum_probs=116.7
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHc
Q 013369 36 SENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMN 115 (444)
Q Consensus 36 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 115 (444)
+|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 489999999999999999999999988 6778999999999999999999999999999988 68899999999999999
Q ss_pred CCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Q 013369 116 GQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSK 164 (444)
Q Consensus 116 g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 164 (444)
|+ .+++++|++.+ .+++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 79 ~~-~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GH-LEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred Ch-HHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99 99999999984 5578889999999999999999999999999664
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.4e-23 Score=175.83 Aligned_cols=127 Identities=20% Similarity=0.263 Sum_probs=116.2
Q ss_pred ccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHH
Q 013369 67 KNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHL 146 (444)
Q Consensus 67 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 146 (444)
....|.||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..|+ .+++++|++. +.+++..|..|.||||+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGH-LEIVEVLLKN-GADVNAVDAIGFTPLHL 86 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC-HHHHHHHHHc-CCCCCcCCCCCCCHHHH
Confidence 4566889999999999999999999999988 7889999999999999999 9999999998 45688899999999999
Q ss_pred HHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhcc
Q 013369 147 AVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALES 202 (444)
Q Consensus 147 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 202 (444)
|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++++|++.|
T Consensus 87 A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLK------HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHH------cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999 55667889999999999999999999999999875
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=5.9e-25 Score=194.02 Aligned_cols=168 Identities=20% Similarity=0.169 Sum_probs=136.7
Q ss_pred HhhcCCcHHHHHHHHhcCCCCchH------HhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHH
Q 013369 5 ALRKDDHVDEVKLLLSKIPKLSDD------VIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTV 78 (444)
Q Consensus 5 A~~~g~~~~~v~~Ll~~~~~~~~~------~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A 78 (444)
|++.|+ .+.++.|++........ .....+..|.||||.|+..|+.++++.|++ +.+ ++.+|..|+||||+|
T Consensus 7 aa~~~~-~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A 83 (183)
T 3deo_A 7 GSRTAG-EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFV 83 (183)
T ss_dssp EEEEET-TTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHH
T ss_pred HHHhcC-CchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHH
Confidence 455566 66666666542221111 011112468999999999999999999999 666 778999999999999
Q ss_pred HHCCCHHHHHHHhhcCCCCccccC-CCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHH
Q 013369 79 AERGDVEMVQFLGKQNPESCLVED-NLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQ 157 (444)
Q Consensus 79 a~~g~~~~v~~Ll~~~~~~~~~~d-~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~ 157 (444)
+..|+.+++++|+++++++ +.+| ..|.||||+|+..|+ .+++++|++++ .+++.+|.+|+||||+|+..+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~------ 154 (183)
T 3deo_A 84 AGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVR-PEVVEALVELG-ADIEVEDERGLTALELAREIL------ 154 (183)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTTC-HHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHH------
T ss_pred HHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcCc-HHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhc------
Confidence 9999999999999999998 4555 889999999999999 99999999984 568889999999999998632
Q ss_pred HHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhc
Q 013369 158 VLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALE 201 (444)
Q Consensus 158 ~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 201 (444)
....+.++|++|+..|+.+++++|.++
T Consensus 155 -----------------~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 155 -----------------KTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp -----------------HTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -----------------cCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 124567999999999999999999875
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=2.9e-23 Score=173.96 Aligned_cols=127 Identities=22% Similarity=0.314 Sum_probs=83.0
Q ss_pred cccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHH
Q 013369 66 IKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALH 145 (444)
Q Consensus 66 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 145 (444)
.+|.+|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+ .+++++|++. +.+++..|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~-g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGH-LKVVELLLQH-KALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCC-HHHHHHHHHc-CCcccCcCCCCCCHHH
Confidence 35666667777777777777777777666665 4666667777777777776 6777777665 3345666666777777
Q ss_pred HHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhc
Q 013369 146 LAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALE 201 (444)
Q Consensus 146 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 201 (444)
+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..+..+++++|.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLS------YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 7777777777777776 3445566677777777777766666666655554
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=4e-23 Score=191.01 Aligned_cols=142 Identities=21% Similarity=0.195 Sum_probs=127.3
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccC-CCCCCHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVED-NLSMIPLHRAA 113 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~tpLh~Aa 113 (444)
..|.||||+|+..|+.++++.|++ +.+ ++.+|..|+||||+|+..|+.+++++|+++++++ +.+| ..|.||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHH
Confidence 458999999999999999999999 766 7789999999999999999999999999999998 4555 88999999999
Q ss_pred HcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHH
Q 013369 114 MNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIE 193 (444)
Q Consensus 114 ~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 193 (444)
..|+ .+++++|+++ +.+++.+|..|+||||+|+.. . .+..+.||||+|+..|+.+
T Consensus 120 ~~g~-~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~---------~--------------~~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 120 GYVR-PEVVEALVEL-GADIEVEDERGLTALELAREI---------L--------------KTTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp HTTC-HHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH---------H--------------TTCCCSSHHHHHHHHHHHH
T ss_pred HcCC-HHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHH---------H--------------hccCCCCHHHHHHHcChHH
Confidence 9999 9999999998 556888999999999999851 1 2356899999999999999
Q ss_pred HHHHHHhccCC
Q 013369 194 IVKALALESSN 204 (444)
Q Consensus 194 iv~~Ll~~ga~ 204 (444)
++++|++++.+
T Consensus 175 iv~~L~~~~~~ 185 (244)
T 3ui2_A 175 VINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHEE
T ss_pred HHHHHHHhccc
Confidence 99999997544
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=4.8e-23 Score=172.65 Aligned_cols=125 Identities=19% Similarity=0.219 Sum_probs=115.1
Q ss_pred cCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHH
Q 013369 33 SSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRA 112 (444)
Q Consensus 33 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 112 (444)
+|..|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHH
Confidence 457899999999999999999999999988 6789999999999999999999999999999987 68899999999999
Q ss_pred HHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHH
Q 013369 113 AMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVK 161 (444)
Q Consensus 113 a~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~ 161 (444)
+..|+ .+++++|++. +.+++.+|..|.||||+|+..+..+++++|.+
T Consensus 84 ~~~~~-~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGH-VDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTC-HHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCC-HHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 99999 9999999998 55688999999999999999999998887766
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=4.1e-23 Score=187.87 Aligned_cols=132 Identities=18% Similarity=0.159 Sum_probs=111.2
Q ss_pred ccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHH
Q 013369 65 MIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTAL 144 (444)
Q Consensus 65 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~L 144 (444)
+..|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+ .+++++|++..+.+++.+|..|+|||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGH-KDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC-HHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCC-HHHHHHHHcCCCCCccccCCCCCCHH
Confidence 345677899999999999999999999999887 6888999999999999999 99999999986777888999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 145 HLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 145 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
|+|+..|+.+++++|++ .++.++.+|.+|+||||+|+..++.++++.|++.|+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLA------KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHHHHTCHHHHHHHHH------HTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HHHHHcCCHHHHHHHHH------cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 99999999999999998 4556778999999999999999999999999999776
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.4e-22 Score=191.58 Aligned_cols=126 Identities=17% Similarity=0.156 Sum_probs=71.1
Q ss_pred CChHHHHHHHCCCHHHHHHHhhcCCCCccc-----cCCCCCCHHHHHHHc---CCcHHHHHHHHHhCcchhhccccCCCC
Q 013369 71 GQTAVHTVAERGDVEMVQFLGKQNPESCLV-----EDNLSMIPLHRAAMN---GQSVDVIRALVSICPESLEKLTSNQDT 142 (444)
Q Consensus 71 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~-----~d~~g~tpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~~d~~g~t 142 (444)
+.++||.|+..|+.+.++.|++.++++... .|..|.||||+|+.. |+ .+++++|++.+ .+++.+|.+|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~-~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTT-HHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCc-HHHHHHHHhcC-CCCCCCCCCCCC
Confidence 345566666666666666555555554221 355555666666554 55 56666666552 335555555666
Q ss_pred HHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 143 ALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 143 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
|||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..++.+++++|+++|++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 6666666666666666655 3344455555666666666666666666666666555
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=193.81 Aligned_cols=142 Identities=18% Similarity=0.108 Sum_probs=122.4
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCccccc------ccCCCChHHHHHHHC---CCHHHHHHHhhcCCCCccccCCCC
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMI------KNQHGQTAVHTVAER---GDVEMVQFLGKQNPESCLVEDNLS 105 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g 105 (444)
....++||.|+..|+.+.++.|++.++++ +. .|..|.||||+|+.. |+.+++++|+++++++ +.+|.+|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G 226 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 226 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCC
Confidence 45789999999999999999999999884 44 689999999999997 8999999999999988 7899999
Q ss_pred CCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHH
Q 013369 106 MIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHL 185 (444)
Q Consensus 106 ~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~ 185 (444)
.||||+|+..|+ .+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|++.|.+ .|+||||+
T Consensus 227 ~TpLh~A~~~g~-~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------------~g~tpLh~ 292 (301)
T 2b0o_E 227 NTALHYAALYNQ-PDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------------TFAFPLHV 292 (301)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------------TTSSCCC-
T ss_pred CCHHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------------CCCChhHH
Confidence 999999999999 9999999998 556889999999999999999999999999997664 47899999
Q ss_pred HHhcCCH
Q 013369 186 ATFNKSI 192 (444)
Q Consensus 186 A~~~~~~ 192 (444)
|++.|+.
T Consensus 293 A~~~g~~ 299 (301)
T 2b0o_E 293 DYSWVIS 299 (301)
T ss_dssp -------
T ss_pred HHhcCCc
Confidence 9998874
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=3.1e-22 Score=164.50 Aligned_cols=111 Identities=19% Similarity=0.245 Sum_probs=87.2
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHH
Q 013369 35 SSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAM 114 (444)
Q Consensus 35 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 114 (444)
..|+||||.|+..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 4577888888888888888888888776 5677888888888888888888888888888776 6778888888888888
Q ss_pred cCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHH
Q 013369 115 NGQSVDVIRALVSICPESLEKLTSNQDTALHLAVK 149 (444)
Q Consensus 115 ~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 149 (444)
.|+ .+++++|+++ +.+++.+|.+|+||||+|..
T Consensus 83 ~~~-~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGH-VSCVKLLLSK-GADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHCCC
T ss_pred cCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHhCC
Confidence 888 8888888887 34467777888888888743
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=7.7e-22 Score=182.34 Aligned_cols=137 Identities=20% Similarity=0.164 Sum_probs=122.7
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCccccccc-CCCChHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKN-QHGQTAVHTVA 79 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa 79 (444)
|||.|++.|+ .++|+.|++ +.++ +.+|..|.||||+|+..|+.+++++|++.+++ ++.+| ..|+||||+|+
T Consensus 48 ~L~~A~~~g~-~~~v~~Ll~-~~~~-----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 48 PWWTAARKAD-EQALSQLLE-DRDV-----DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHTTTC-HHHHHHTTT-TCCT-----TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHc-CCCC-----CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHH
Confidence 6899999999 999999999 6553 44568899999999999999999999999998 55566 88999999999
Q ss_pred HCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHH
Q 013369 80 ERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVL 159 (444)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~L 159 (444)
..|+.+++++|+++|+++ +.+|..|.||||+|+..++ +..+.||||+|+..|+.+++++|
T Consensus 120 ~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~-------------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADI-EVEDERGLTALELAREILK-------------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT-------------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh-------------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 999999999999999998 6899999999999997655 25689999999999999999999
Q ss_pred HHhccc
Q 013369 160 VKVSKI 165 (444)
Q Consensus 160 l~~~~~ 165 (444)
++.+.+
T Consensus 180 ~~~~~~ 185 (244)
T 3ui2_A 180 EGQVFE 185 (244)
T ss_dssp HHHHEE
T ss_pred HHhccc
Confidence 986543
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=8.5e-22 Score=173.67 Aligned_cols=133 Identities=20% Similarity=0.183 Sum_probs=120.0
Q ss_pred ChhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCccccccc-CCCChHHHHHH
Q 013369 1 MFEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKN-QHGQTAVHTVA 79 (444)
Q Consensus 1 ~L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa 79 (444)
|||.|++.|+ .++++.|++ +.++ +.+|..|.||||+|+..|+.+++++|++.+++ ++.+| ..|+||||+|+
T Consensus 47 ~L~~A~~~g~-~~~v~~Ll~-~~~~-----~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 47 PWWTAARKAD-EQALSQLLE-DRDV-----DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHTTC-HHHHHHHTT-TSCT-----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHHHh-cCCC-----CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHH
Confidence 6899999999 999999999 6553 44568899999999999999999999999998 55566 89999999999
Q ss_pred HCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHH
Q 013369 80 ERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVL 159 (444)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~L 159 (444)
..|+.+++++|+++|+++ +.+|.+|.||||+|+..++ . ..+.++|++|+..|+.+++++|
T Consensus 119 ~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~-~------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 119 GYVRPEVVEALVELGADI-EVEDERGLTALELAREILK-T------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHH-T------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhcc-C------------------cccccHHHHHHHcCHHHHHHHH
Confidence 999999999999999998 7899999999999998765 1 4578999999999999999999
Q ss_pred HH
Q 013369 160 VK 161 (444)
Q Consensus 160 l~ 161 (444)
.+
T Consensus 179 ~~ 180 (183)
T 3deo_A 179 EG 180 (183)
T ss_dssp HT
T ss_pred HH
Confidence 76
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.9e-22 Score=182.24 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=115.1
Q ss_pred hhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhc-CCCCccccCCCCCCH
Q 013369 30 IRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQ-NPESCLVEDNLSMIP 108 (444)
Q Consensus 30 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tp 108 (444)
.+..|..|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++. +.++ +.+|..|.||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tp 143 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTA 143 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCH
Confidence 344556789999999999999999999999988 678999999999999999999999999999 7776 7899999999
Q ss_pred HHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhccc
Q 013369 109 LHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKI 165 (444)
Q Consensus 109 Lh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~ 165 (444)
||+|+..|+ .+++++|+++ +.+++.+|.+|+||||+|+..++.++++.|++.+..
T Consensus 144 L~~A~~~~~-~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 144 LHAAAWKGY-ADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHHHHHTC-HHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HHHHHHcCC-HHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 999999999 9999999999 556889999999999999999999999999986554
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=8.3e-22 Score=161.88 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=94.4
Q ss_pred cCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHH
Q 013369 68 NQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLA 147 (444)
Q Consensus 68 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 147 (444)
+..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+ .+++++|++. +.+++.+|..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQ-LEILEFLLLK-GADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTC-HHHHHHHHTT-TCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCC-HHHHHHHHHc-CCCCCcCCCCCCCHHHHH
Confidence 456889999999999999999999998887 6888889999999999999 9999999987 455788888899999999
Q ss_pred HHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhc
Q 013369 148 VKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFN 189 (444)
Q Consensus 148 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 189 (444)
+..|+.+++++|++ .+.+++.+|.+|+||||+|...
T Consensus 81 ~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 81 VYEGHVSCVKLLLS------KGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHCCCH
T ss_pred HHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHhCCH
Confidence 99999999999998 4556777889999999988443
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=3.9e-21 Score=181.05 Aligned_cols=126 Identities=15% Similarity=0.144 Sum_probs=113.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcc-----cccccCCCChHHHHHHHC---CCHHHHHHHhhcCCCCccccCCCCCCH
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKL-----AMIKNQHGQTAVHTVAER---GDVEMVQFLGKQNPESCLVEDNLSMIP 108 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~tp 108 (444)
..++|+.|+..|+.+.++.+++.+++. ++..|..|.||||+|+.. |+.+++++|+++|+++ +.+|..|.||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCH
Confidence 457899999999999999999999875 334588999999999999 8999999999999998 7889999999
Q ss_pred HHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhccc
Q 013369 109 LHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKI 165 (444)
Q Consensus 109 Lh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~ 165 (444)
||+|+..|+ .+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.|++
T Consensus 209 Lh~A~~~g~-~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 209 LHYCCLTDN-AECLKLLLRG-KASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHcCC-HHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999 9999999997 456889999999999999999999999999997653
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.3e-20 Score=175.74 Aligned_cols=195 Identities=19% Similarity=0.241 Sum_probs=127.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHH
Q 013369 34 SSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAA 113 (444)
Q Consensus 34 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa 113 (444)
|..+.+.|+.+...|+..+.+.+...-+.....+-..+....+ ....-..+++...........+....++|+.|+
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~ 138 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARKKHADTAAKLHSLCEAV 138 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhcccccccccchhhhhhhhHh
Confidence 4567778888888787666555443322211000011111111 111111223322222111112222346888888
Q ss_pred HcCCcHHHHHHHHHhCcch-----hhccccCCCCHHHHHHHc---CCHHHHHHHHHhcccccccccccccCCCCCcHHHH
Q 013369 114 MNGQSVDVIRALVSICPES-----LEKLTSNQDTALHLAVKN---SHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHL 185 (444)
Q Consensus 114 ~~g~~~~~v~~Ll~~~~~~-----~~~~d~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~ 185 (444)
..|+ .+.+..+++.+.+. ++..|..|+||||+|+.. |+.+++++|++ .++++|.+|.+|+||||+
T Consensus 139 ~~~d-~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~------~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 139 KTRD-IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ------NSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HTTC-HHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH------HCSCTTCCCTTCCCHHHH
T ss_pred hhcc-cHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH------CCCCccccCCCCCCHHHH
Confidence 8888 88888888876553 233377888888888888 78888888888 455677788888888888
Q ss_pred HHhcCCHHHHHHHHhccCCCccccccccccccCCCCHHHHHHHcCCchhHHHHHHHHHHcCCCCC
Q 013369 186 ATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTALEVCKANSEDSVFKEIGLILQEASARSP 250 (444)
Q Consensus 186 A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 250 (444)
|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..+ ..+++++|+++|+...
T Consensus 212 A~~~g~~~~v~~Ll~~gad-------~~~~d~~g~tpL~~A~~~~----~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKAS-------IEIANESGETPLDIAKRLK----HEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC-------CCCccCCCCCHHHHHHHcC----CHHHHHHHHHcCCCCC
Confidence 8888888888888888777 8888888888888888876 5678888888887644
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2.5e-20 Score=181.97 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=104.1
Q ss_pred ccCCCChHHHHHHHC-CCHHHHHHHhhcCCCCccccC--CCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCH
Q 013369 67 KNQHGQTAVHTVAER-GDVEMVQFLGKQNPESCLVED--NLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTA 143 (444)
Q Consensus 67 ~d~~G~tpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~ 143 (444)
.+..+.||||.|+.. |+.++++.|+++|+++ +..+ ..|.||||+|+..|+ .+++++|+++ +.+++..|..|+||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~-~~iv~~LL~~-Gadvn~~d~~G~Tp 271 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANS-LLACEFLLQN-GANVNQADSAGRGP 271 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCC-HHHHHHHHHc-CCCCCCCCCCCCCH
Confidence 445667888888888 8888888888888887 4555 778888888888888 8888888887 45577888888888
Q ss_pred HHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHH
Q 013369 144 LHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTAL 223 (444)
Q Consensus 144 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L 223 (444)
||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..++.+++++|++.+.. ..+....+..+.|++
T Consensus 272 Lh~A~~~g~~~~v~~LL~------~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~----~~~~~~~~~~~~t~l 341 (368)
T 3jue_A 272 LHHATILGHTGLACLFLK------RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR----EAEAAQGQAGDETYL 341 (368)
T ss_dssp HHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred HHHHHHcCcHHHHHHHHH------CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----cccccccCCCCCCHH
Confidence 888888888888888888 4556777888888888888888888888888887765 455677788888888
Q ss_pred HHHHHc
Q 013369 224 EVCKAN 229 (444)
Q Consensus 224 ~~A~~~ 229 (444)
+++...
T Consensus 342 ~i~~~~ 347 (368)
T 3jue_A 342 DIFRDF 347 (368)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 888754
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2.3e-20 Score=182.14 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=115.2
Q ss_pred CCChHHHHHHhc-CCHHHHHHHHhhCCccccccc--CCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHH
Q 013369 36 SENNPLLTACEY-GNHQVAKEIASRWPKLAMIKN--QHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRA 112 (444)
Q Consensus 36 ~g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 112 (444)
.+.|+||.|+.. |+.++++.|++.+++ ++..| ..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A 275 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHA 275 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 356899999999 999999999999988 56677 88999999999999999999999999998 68999999999999
Q ss_pred HHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhc
Q 013369 113 AMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFN 189 (444)
Q Consensus 113 a~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 189 (444)
+..|+ .+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++.+. ........+..+.|+++++...
T Consensus 276 ~~~g~-~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~---~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 276 TILGH-TGLACLFLKR-GADLGARDSEGRDPLTIAMETANADIVTLLRLAKM---REAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHTC-HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------------
T ss_pred HHcCc-HHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CcccccccCCCCCCHHHHHHHH
Confidence 99999 9999999998 45688999999999999999999999999998764 3334455677788988887654
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=1.1e-19 Score=141.50 Aligned_cols=90 Identities=28% Similarity=0.424 Sum_probs=72.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcC
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNG 116 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 116 (444)
|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcC
Confidence 77888888888888888888888777 5677888888888888888888888888888777 577788888888888888
Q ss_pred CcHHHHHHHHHhC
Q 013369 117 QSVDVIRALVSIC 129 (444)
Q Consensus 117 ~~~~~v~~Ll~~~ 129 (444)
+ .+++++|++.+
T Consensus 80 ~-~~~~~~Ll~~g 91 (93)
T 1n0q_A 80 H-LEVVKLLLEAG 91 (93)
T ss_dssp C-HHHHHHHHHTT
T ss_pred C-HHHHHHHHHcC
Confidence 8 88888888764
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=1.8e-19 Score=183.73 Aligned_cols=125 Identities=18% Similarity=0.162 Sum_probs=111.2
Q ss_pred CChHHHHHHHCCCHHHHHHHhhcCCCCcccc------CCCCCCHHHHHHH---cCCcHHHHHHHHHhCcchhhccccCCC
Q 013369 71 GQTAVHTVAERGDVEMVQFLGKQNPESCLVE------DNLSMIPLHRAAM---NGQSVDVIRALVSICPESLEKLTSNQD 141 (444)
Q Consensus 71 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~~~v~~Ll~~~~~~~~~~d~~g~ 141 (444)
..+.||.|+..|+.++++.|++.|+++ +.. |..|.||||+|+. .|+ .+++++|++++ .+++.+|.+|+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~-~~~v~~Ll~~g-a~vn~~d~~g~ 208 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNG-GHLDAKAADGN 208 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTT-HHHHHHHHHHS-CCTTCCCSSSC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhccccc-HHHHHHHHHcC-CCCCccCCCCC
Confidence 347899999999999999999999887 444 8889999999965 899 99999999985 56889999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhccCC
Q 013369 142 TALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLATFNKSIEIVKALALESSN 204 (444)
Q Consensus 142 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 204 (444)
||||+|+.+|+.+++++|++ .+++++.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHH------TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred cHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999998 5667888999999999999999999999999999887
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=2.2e-19 Score=183.15 Aligned_cols=136 Identities=18% Similarity=0.124 Sum_probs=114.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcccccc------cCCCChHHHHHHH---CCCHHHHHHHhhcCCCCccccCCCCCC
Q 013369 37 ENNPLLTACEYGNHQVAKEIASRWPKLAMIK------NQHGQTAVHTVAE---RGDVEMVQFLGKQNPESCLVEDNLSMI 107 (444)
Q Consensus 37 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~G~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~g~t 107 (444)
..+.||.|+..|+.+.++.|++.|++ ++.. |..|.||||+|+. .|+.+++++|+++|+++ +.+|.+|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 45789999999999999999999988 4444 8899999999966 99999999999999998 799999999
Q ss_pred HHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHHHH
Q 013369 108 PLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHLAT 187 (444)
Q Consensus 108 pLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~ 187 (444)
|||+|+..|+ .+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|+++|++. +. +|+|.+.
T Consensus 210 pLh~A~~~g~-~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~------~~------~~~h~~~ 275 (497)
T 3lvq_E 210 ALHYAALYNQ-PDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT------FA------FPLHVDY 275 (497)
T ss_dssp HHHHHTTTTC-HHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------------
T ss_pred HHHHHHHcCC-HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC------CC------Ccceeec
Confidence 9999999999 9999999998 5568999999999999999999999999999965543 22 6888765
Q ss_pred h
Q 013369 188 F 188 (444)
Q Consensus 188 ~ 188 (444)
.
T Consensus 276 ~ 276 (497)
T 3lvq_E 276 S 276 (497)
T ss_dssp -
T ss_pred c
Confidence 4
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=3.2e-19 Score=138.71 Aligned_cols=91 Identities=36% Similarity=0.521 Sum_probs=46.6
Q ss_pred CCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHH
Q 013369 105 SMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLH 184 (444)
Q Consensus 105 g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 184 (444)
|+||||+|+..|+ .+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||
T Consensus 2 g~t~L~~A~~~~~-~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 2 GRTPLHLAARNGH-LEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLE------AGADVNAKDKNGRTPLH 73 (93)
T ss_dssp -CCHHHHHHHHTC-HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCC-HHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHH
Confidence 4455555555555 55555555442 2344445555555555555555555555555 23334445555555555
Q ss_pred HHHhcCCHHHHHHHHhccC
Q 013369 185 LATFNKSIEIVKALALESS 203 (444)
Q Consensus 185 ~A~~~~~~~iv~~Ll~~ga 203 (444)
+|++.++.+++++|+++|+
T Consensus 74 ~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHHTTCHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCC
Confidence 5555555555555555544
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=3.3e-19 Score=144.32 Aligned_cols=106 Identities=21% Similarity=0.313 Sum_probs=59.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHH
Q 013369 34 SSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAA 113 (444)
Q Consensus 34 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa 113 (444)
|.+|.||||+|+..|+.++++.|++.+++ ++..|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAK 83 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHH
Confidence 34556666666666666666666665555 4455555666666666666666666666555554 455555555555555
Q ss_pred HcCCcHHHHHHHHHhCcchhhccccCCCCH
Q 013369 114 MNGQSVDVIRALVSICPESLEKLTSNQDTA 143 (444)
Q Consensus 114 ~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~ 143 (444)
..|+ .+++++|+++ +.+++..+..|.+|
T Consensus 84 ~~~~-~~~~~~Ll~~-ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGH-HEIVKLLDAK-GADVNARSWGSSHH 111 (115)
T ss_dssp TTTC-HHHHHHHHTT-SSSHHHHSCCCC--
T ss_pred HCCC-HHHHHHHHHc-CCCCCcCCcccccc
Confidence 5555 5555555554 23345555555544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=3.5e-19 Score=144.20 Aligned_cols=109 Identities=33% Similarity=0.398 Sum_probs=72.0
Q ss_pred ccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCC
Q 013369 100 VEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDG 179 (444)
Q Consensus 100 ~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G 179 (444)
.+|.+|+||||+|+..|+ .+++++|++.+ .+++..|..|+||||+|+..|+.+++++|++ .+..++.+|..|
T Consensus 4 ~~d~~g~t~L~~A~~~~~-~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~d~~g 75 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGH-AEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLA------KGADVNARSKDG 75 (115)
T ss_dssp CCSCSSCCHHHHHHHHTC-HHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTT------TTCCTTCCCTTC
T ss_pred ccCCCCCCHHHHHHHcCC-HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCcccCCCC
Confidence 345666666666666666 66666666653 3355666667777777777777777777776 344556677777
Q ss_pred CcHHHHHHhcCCHHHHHHHHhccCCCccccccccccccCCCCHH
Q 013369 180 NTVLHLATFNKSIEIVKALALESSNSSSIMIRVNTLNKQGQTAL 223 (444)
Q Consensus 180 ~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~~~v~~~~~n~~G~T~L 223 (444)
+||||+|+..++.+++++|+++|++ +|.++..|.+|-
T Consensus 76 ~tpl~~A~~~~~~~~~~~Ll~~ga~-------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIVKLLDAKGAD-------VNARSWGSSHHH 112 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTSSS-------HHHHSCCCC---
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC-------CCcCCccccccc
Confidence 7777777777777777777777666 777777776653
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=3.7e-17 Score=131.29 Aligned_cols=92 Identities=21% Similarity=0.320 Sum_probs=72.8
Q ss_pred hhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHH
Q 013369 31 RASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLH 110 (444)
Q Consensus 31 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 110 (444)
...|.+|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~ 95 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFD 95 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHH
Confidence 33456788888888888888888888888776 5677888888888888888888888888888776 677888888888
Q ss_pred HHHHcCCcHHHHHHH
Q 013369 111 RAAMNGQSVDVIRAL 125 (444)
Q Consensus 111 ~Aa~~g~~~~~v~~L 125 (444)
+|+..|+ .+++++|
T Consensus 96 ~A~~~~~-~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGN-EDLAEIL 109 (110)
T ss_dssp HHHHHTC-HHHHHHH
T ss_pred HHHHcCC-HHHHHHh
Confidence 8888888 8888765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.7e-16 Score=127.44 Aligned_cols=93 Identities=19% Similarity=0.278 Sum_probs=66.1
Q ss_pred cccccCCCChHHHHHHHCCCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCH
Q 013369 64 AMIKNQHGQTAVHTVAERGDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTA 143 (444)
Q Consensus 64 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~ 143 (444)
....|.+|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+ .+++++|+++ +.+++.+|..|+||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~-~~~v~~Ll~~-ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGH-LEVVKLLLEA-GADVXAQDKFGKTA 93 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC-HHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC-HHHHHHHHHc-CCCccccccCCCcH
Confidence 3456677778888888888888888888777766 5667777777777777777 7777777776 34466677777777
Q ss_pred HHHHHHcCCHHHHHHH
Q 013369 144 LHLAVKNSHLEAFQVL 159 (444)
Q Consensus 144 Lh~A~~~g~~~iv~~L 159 (444)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 7777777777777665
No 115
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=42.92 E-value=64 Score=30.02 Aligned_cols=30 Identities=10% Similarity=0.006 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCccch
Q 013369 353 HFRTILLFLVTCVCIVYVIIVDELMPKLVV 382 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (444)
+-|-.+.+.++-.+.+|...+...+|...+
T Consensus 243 ~~Rv~lgit~lLt~tv~~~~~~~~lP~~S~ 272 (347)
T 3rhw_A 243 PARVTLGVTTLLTMTAQSAGINSQLPPVSY 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred cceEEEEeehHHHHHHHHHHHHhhCCCccc
Confidence 344445555555667788888888997644
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=42.66 E-value=22 Score=33.17 Aligned_cols=25 Identities=4% Similarity=0.070 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHhc----cCccch
Q 013369 358 LLFLVTCVCIVYVIIVDEL----MPKLVV 382 (444)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~----~~~~~~ 382 (444)
-.+++.++..+|++|+|.+ +|...|
T Consensus 283 Tiit~IflP~T~IaGiyGMNf~~mPel~~ 311 (339)
T 4ev6_A 283 TMVTTIFAVPMWITGIYGMNFSYLPLANN 311 (339)
T ss_dssp HHHHHHSSHHHHHHHHTTCCCSCCTTSSC
T ss_pred HHHHHHHHHHHHHHhhccCcCCCCCCccC
Confidence 3566677888999999966 565433
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=40.78 E-value=77 Score=29.45 Aligned_cols=166 Identities=10% Similarity=0.037 Sum_probs=84.7
Q ss_pred hcCCCCChHHHHHHhcCCHHHHHHHHhhCC-cc-cccccCCCChHHHHHHHCCCHHHHHHHhhcC-CCC-ccccCCCCCC
Q 013369 32 ASSSSENNPLLTACEYGNHQVAKEIASRWP-KL-AMIKNQHGQTAVHTVAERGDVEMVQFLGKQN-PES-CLVEDNLSMI 107 (444)
Q Consensus 32 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~-~~-~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~-~~~~d~~g~t 107 (444)
..|..|+..+.-....|+.+....+++.-. .+ .-..|..|.-.+..+......+-...+++.- +.. .-..|..|..
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 356778888887788888877777765422 11 1245777777777777766665444444321 111 1134555544
Q ss_pred HHHHHHHcCCcHHHHHHHHHhCcchh--hccccCCCCHHHHHHHcCCHHHHHHHHHhcccccccccccccCCCCCcHHHH
Q 013369 108 PLHRAAMNGQSVDVIRALVSICPESL--EKLTSNQDTALHLAVKNSHLEAFQVLVKVSKIHNKEHVFNWKNEDGNTVLHL 185 (444)
Q Consensus 108 pLh~Aa~~g~~~~~v~~Ll~~~~~~~--~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~ 185 (444)
.+......+. .+....+++.-.... -..+..|...+.-.......+-...+++... .....-..|..||-.+..
T Consensus 148 ViQk~l~~~~-~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~---~~~~~L~~d~~Gn~ViQ~ 223 (351)
T 3gvo_A 148 VVQKCIECVQ-PQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH---QHTEQLVQDQYGNYVIQH 223 (351)
T ss_dssp HHHHHHHHSC-GGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHH---TTHHHHHTSTTHHHHHHH
T ss_pred HHHHHHHhCC-HHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHh---hhHHhcCCCchHHHHHHH
Confidence 4444444443 333333333211111 0113344444444444333332222222110 111222468888888888
Q ss_pred HHhcCCHHHHHHHHhc
Q 013369 186 ATFNKSIEIVKALALE 201 (444)
Q Consensus 186 A~~~~~~~iv~~Ll~~ 201 (444)
....+..+..+.+++.
T Consensus 224 ~l~~~~~~~~~~i~~~ 239 (351)
T 3gvo_A 224 VLEHGRPEDKSKIVSE 239 (351)
T ss_dssp HHHHSCHHHHHHHHHT
T ss_pred HHHhCchhhHHHHHHH
Confidence 8888777766666654
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=40.12 E-value=1.5e+02 Score=24.70 Aligned_cols=129 Identities=15% Similarity=0.025 Sum_probs=78.3
Q ss_pred hhHHhhcCCcHHHHHHHHhcCCCCchHHhhhcCCCCChHHHHHHhcCCHHHHHHHHhhCCcccccccCCCChHHHHHHHC
Q 013369 2 FEEALRKDDHVDEVKLLLSKIPKLSDDVIRASSSSENNPLLTACEYGNHQVAKEIASRWPKLAMIKNQHGQTAVHTVAER 81 (444)
Q Consensus 2 L~~A~~~g~~~~~v~~Ll~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~ 81 (444)
|-.|+..|+ ++....+.+...+. .. -+..=..|...|+.++++....+-.+.. ..+.+....
T Consensus 12 F~LAL~lg~-l~~A~e~a~~l~~~-~~--------Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~--------~L~~Ly~~t 73 (177)
T 3mkq_B 12 FDLALEYGN-LDAALDEAKKLNDS-IT--------WERLIQEALAQGNASLAEMIYQTQHSFD--------KLSFLYLVT 73 (177)
T ss_dssp HHHHHHTTC-HHHHHHHHHHHCCH-HH--------HHHHHHHHHHTTCHHHHHHHHHHTTCHH--------HHHHHHHHH
T ss_pred HHHHHhcCC-HHHHHHHHHHhCCH-HH--------HHHHHHHHHHcCChHHHHHHHHHhCCHH--------HHHHHHHHh
Confidence 346889999 98888877652111 11 1222346677899999998888765532 344555567
Q ss_pred CCHHHHHHHhhcCCCCccccCCCCCCHHHHHHHcCCcHHHHHHHHHhCcchhhccccCCCCHHHHHHHcCCHHHHHHHHH
Q 013369 82 GDVEMVQFLGKQNPESCLVEDNLSMIPLHRAAMNGQSVDVIRALVSICPESLEKLTSNQDTALHLAVKNSHLEAFQVLVK 161 (444)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~ 161 (444)
|+.+-++.|.+.. ...++.....+.+...|+..+.++.|.+.+ .... +...|-.+|..++.+.+++
T Consensus 74 g~~e~L~kla~iA-----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~-r~~e--------A~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 74 GDVNKLSKMQNIA-----QTREDFGSMLLNTFYNNSTKERSSIFAEGG-SLPL--------AYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp TCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTT-CHHH--------HHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-----HHCccHHHHHHHHHHcCCHHHHHHHHHHCC-ChHH--------HHHHHHHcCcHHHHHHHHH
Confidence 7777776664421 122233456777777887334555555543 2222 3466777888888887775
Q ss_pred h
Q 013369 162 V 162 (444)
Q Consensus 162 ~ 162 (444)
.
T Consensus 140 ~ 140 (177)
T 3mkq_B 140 Q 140 (177)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=29.52 E-value=20 Score=33.78 Aligned_cols=27 Identities=11% Similarity=0.303 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHhc----cCccchh
Q 013369 357 ILLFLVTCVCIVYVIIVDEL----MPKLVVR 383 (444)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 383 (444)
.-.+++.++..+|++|+|.+ +|...|.
T Consensus 306 LTiit~IflP~T~IaGiyGMNf~~mPel~~~ 336 (363)
T 2iub_A 306 LTIIATIFMPLTFIAGIYGMNFEYMPELRWK 336 (363)
T ss_dssp HHHHHHHHHHHHHHTTSCC------------
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCcccCc
Confidence 34567778888999999865 6765453
No 120
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=23.03 E-value=58 Score=19.50 Aligned_cols=16 Identities=38% Similarity=0.559 Sum_probs=10.9
Q ss_pred HHHHHHCCCHHHHHHH
Q 013369 75 VHTVAERGDVEMVQFL 90 (444)
Q Consensus 75 Lh~Aa~~g~~~~v~~L 90 (444)
+..||+.|+.+.++.|
T Consensus 17 iyvA~seGd~etv~~L 32 (40)
T 1gp8_A 17 MDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 4567777777777666
No 121
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=22.04 E-value=1.1e+02 Score=19.05 Aligned_cols=7 Identities=29% Similarity=0.354 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 013369 395 MWSLVLA 401 (444)
Q Consensus 395 ~~~~~~~ 401 (444)
++..+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333434
No 122
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=21.72 E-value=4.1e+02 Score=25.91 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCccch
Q 013369 353 HFRTILLFLVTCVCIVYVIIVDELMPKLVV 382 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (444)
+-|-.+.+.++-.+..|...+...+|....
T Consensus 270 ~eRvsLgiT~LLt~tvfl~~v~~~LP~tS~ 299 (493)
T 4aq5_B 270 GEKMSLSISALLALTVFLLLLADKVPETSL 299 (493)
T ss_dssp GGGGTHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred CceEEehHHHHHHHHHHHHHHHhcCCcccc
Confidence 334445555555667788888888887544
Done!