BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013372
MDENSALIEQILREDELEYRGLSRSYNKDEEWQTVSYKKRHSKQPNSDNSLPDRRPDDGA
TTSDVFRAIEEHSEERRRRMSVPQVATPVTGEGSKRHSDEDDDSDAEVSAAVVEVKKVKQ
KKPKKPKVTVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQF
PWLKTFRESTVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASH
QGTGKSSKKVVQQASSKSQVAIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTA
WIIAQTAQGDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILING
AVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVA
QHILTIAIKAAGEGLINSSRPPFW

High Scoring Gene Products

Symbol, full name Information P value
AT1G70770 protein from Arabidopsis thaliana 3.9e-108
AT3G11880 protein from Arabidopsis thaliana 4.8e-62

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013372
        (444 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013955 - symbol:AT1G70770 "AT1G70770" species...  1015  3.9e-108  2
TAIR|locus:2081566 - symbol:AT3G11880 "AT3G11880" species...   634  4.8e-62   1


>TAIR|locus:2013955 [details] [associations]
            symbol:AT1G70770 "AT1G70770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] [GO:0006007 "glucose catabolic process"
            evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
            [GO:0009651 "response to salt stress" evidence=RCA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0009506 GO:GO:0005634 GO:GO:0005794 GO:GO:0005774
            EMBL:AC011663 EMBL:AC008148 InterPro:IPR019308 PANTHER:PTHR13448
            Pfam:PF10151 UniGene:At.48357 UniGene:At.70098 EMBL:AY136430
            EMBL:BT008378 EMBL:AK318674 IPI:IPI00544310 PIR:C96732
            RefSeq:NP_001185367.1 RefSeq:NP_177234.1 PaxDb:Q9S791 PRIDE:Q9S791
            ProMEX:Q9S791 DNASU:843414 EnsemblPlants:AT1G70770.1
            EnsemblPlants:AT1G70770.2 GeneID:843414 KEGG:ath:AT1G70770
            TAIR:At1g70770 eggNOG:NOG256194 HOGENOM:HOG000005794
            InParanoid:Q9S791 OMA:KVTYPKR PhylomeDB:Q9S791
            ProtClustDB:CLSN2682055 ArrayExpress:Q9S791 Genevestigator:Q9S791
            Uniprot:Q9S791
        Length = 610

 Score = 1015 (362.4 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
 Identities = 192/306 (62%), Positives = 239/306 (78%)

Query:   129 TVSEAAARIDAGDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFRE 188
             ++ EAA++ID  +L AFLV+ + SY  Q +IQLMRFADYFGRA + VSS QFPW+K F+E
Sbjct:   138 SLPEAASKIDPLNLEAFLVEASESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKE 197

Query:   189 STVAKMVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTGXXXX 248
             S ++K++++PL+H+PE VYK SVDW+N R  +ALG+FVLW+ D IL DLA+ QG      
Sbjct:   198 SPLSKLIEVPLAHIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGK 257

Query:   249 XXXXXXXXXXXXXIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIAQTAQ 308
                          IFV LAMVLRRKPD L ++LP  RENPKYQGQDKLPVT W++AQ +Q
Sbjct:   258 KGGQQTTSKSQVAIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQASQ 317

Query:   309 GDLAVGLYMWVRVLLPMLSGKSSCNPQARDSILQLVERILSLPKARTILINGAVKKGERL 368
             GD+AVGLY W   LLP++ G  +CNPQ+RD ILQLVE+IL+ PKARTIL+NGAV+KGERL
Sbjct:   318 GDIAVGLYSWAHNLLPVV-GNKNCNPQSRDLILQLVEKILTNPKARTILVNGAVRKGERL 376

Query:   369 VPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQVAQHILTIAI 428
             +PP + E+L+R+TFPA S R+KATERFEAIYP+LKEVALAG+PGSKAMKQV Q I T A+
Sbjct:   377 IPPPSFEILLRLTFPASSARVKATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFAL 436

Query:   429 KAAGEG 434
             K AGEG
Sbjct:   437 KLAGEG 442

 Score = 74 (31.1 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query:    15 DELEYRGLSRSY-NKDEEWQTVSYKKRHSKQPNSDNS 50
             + +EY G   S  N D  W+ V Y KRH KQ  +D +
Sbjct:     5 ESVEYNGFETSNGNVDHGWKKVVYPKRHRKQKQADQA 41


>TAIR|locus:2081566 [details] [associations]
            symbol:AT3G11880 "AT3G11880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031348 "negative regulation
            of defense response" evidence=RCA] EMBL:CP002686 InterPro:IPR019308
            PANTHER:PTHR13448 Pfam:PF10151 eggNOG:KOG4467 EMBL:AF428353
            IPI:IPI00548234 RefSeq:NP_566403.1 UniGene:At.18742
            EnsemblPlants:AT3G11880.1 GeneID:820361 KEGG:ath:AT3G11880
            Genevestigator:Q944J9 Uniprot:Q944J9
        Length = 443

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 149/313 (47%), Positives = 195/313 (62%)

Query:   129 TVSEAAARIDA-GDLGAFLVDITGSYEKQEDIQLMRFADYFGRAFASVSSSQFPWLKTFR 187
             ++ EAAA+ID   DL A LV I+ S+    + QL++F DY       +SS Q+ WL  F+
Sbjct:     6 SLPEAAAQIDLWDDLAASLVKISKSHAFVPEEQLLKFVDYLE---IKLSSVQYLWLDMFK 62

Query:   188 ESTVAK---MVDIPLSHVPEDVYKMSVDWLNQRSFDALGSFVLWSLDSILADLASHQGTG 244
              S   K   M+D+PLSH+P  VY  SV+WL++ S   L +FV+WSL+ +L  L   Q  G
Sbjct:    63 GSPCPKLIDMIDVPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQQGG 122

Query:   245 XXXXXXXXXXXXXXXXXIFVVLAMVLRRKPDVLISLLPIKRENPKYQGQDKLPVTAWIIA 304
                              +FV LAMVLR +P+ L+ +LP  +E+ +YQG DKLP+  W++A
Sbjct:   123 HQRRTTSKFHVA-----VFVALAMVLRNEPNTLVIVLPTLKED-EYQGHDKLPILVWMMA 176

Query:   305 QTAQGDLAVGLYMWVRVLLPM-----LSGKSSCNPQARDSILQLVERILSLPKARTILIN 359
             Q +QGDL+VGLY W   LLP+     L   S  N Q+ D ILQL E ILS   ARTIL+N
Sbjct:   177 QASQGDLSVGLYSWSCNLLPVFYQENLLPVSRSNSQSMDLILQLAEMILSNLDARTILVN 236

Query:   360 GAVKKGERLVPPSALEVLMRVTFPAPSLRIKATERFEAIYPILKEVALAGSPGSKAMKQV 419
             G V   +RL+ P A E+LMR+TFPA S R+KATERFEAIYP+LKEVALA  PGS+ MKQV
Sbjct:   237 GTVIDKQRLISPYAFELLMRLTFPASSERVKATERFEAIYPLLKEVALACEPGSELMKQV 296

Query:   420 AQHILTIAIKAAG 432
              Q I   ++  AG
Sbjct:   297 TQQIFHYSLIIAG 309


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      444       386   0.00092  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  230 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.64u 0.10s 27.74t   Elapsed:  00:00:01
  Total cpu time:  27.64u 0.10s 27.74t   Elapsed:  00:00:01
  Start:  Fri May 10 14:37:29 2013   End:  Fri May 10 14:37:30 2013

Back to top