Query 013378
Match_columns 444
No_of_seqs 500 out of 1327
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 03:15:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013378.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013378hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.3E-38 4.9E-43 282.4 37.5 370 7-431 12-388 (394)
2 PRK03545 putative arabinose tr 100.0 4E-37 8.7E-42 288.5 38.2 365 10-431 11-382 (390)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.9E-36 6.2E-41 283.6 31.2 379 7-401 7-400 (412)
4 PRK11551 putative 3-hydroxyphe 100.0 3.3E-35 7.2E-40 277.4 38.5 349 10-397 17-371 (406)
5 PRK11663 regulatory protein Uh 100.0 1.5E-35 3.2E-40 281.1 35.8 390 11-433 26-428 (434)
6 PRK11646 multidrug resistance 100.0 4.7E-35 1E-39 274.3 38.2 368 11-426 13-385 (400)
7 COG2271 UhpC Sugar phosphate p 100.0 5.3E-36 1.1E-40 263.2 28.4 368 7-397 24-410 (448)
8 TIGR00900 2A0121 H+ Antiporter 100.0 2.6E-35 5.7E-40 274.3 34.7 350 11-397 2-364 (365)
9 PRK09705 cynX putative cyanate 100.0 3.3E-35 7.1E-40 275.1 34.8 352 25-432 26-384 (393)
10 PRK10489 enterobactin exporter 100.0 6.5E-35 1.4E-39 276.0 36.3 349 7-397 16-375 (417)
11 PRK09556 uhpT sugar phosphate 100.0 7.8E-36 1.7E-40 285.7 29.8 358 15-395 36-411 (467)
12 PRK03633 putative MFS family t 100.0 8.6E-35 1.9E-39 271.7 35.9 370 3-431 1-374 (381)
13 PRK10642 proline/glycine betai 100.0 6.1E-34 1.3E-38 274.0 41.2 365 7-397 15-405 (490)
14 PRK14995 methyl viologen resis 100.0 1.4E-34 3E-39 278.6 36.3 375 5-396 3-413 (495)
15 TIGR00903 2A0129 major facilit 100.0 2.9E-34 6.3E-39 264.4 36.3 329 19-394 2-340 (368)
16 PRK05122 major facilitator sup 100.0 2.1E-34 4.5E-39 271.3 35.6 370 5-432 12-392 (399)
17 PRK09874 drug efflux system pr 100.0 5.7E-34 1.2E-38 269.4 37.9 379 5-430 11-399 (408)
18 PRK10213 nepI ribonucleoside t 100.0 1.8E-33 3.8E-38 263.1 40.3 326 23-397 35-367 (394)
19 TIGR00893 2A0114 d-galactonate 100.0 6.3E-35 1.4E-39 274.9 29.4 357 19-397 5-374 (399)
20 TIGR01299 synapt_SV2 synaptic 100.0 3.3E-34 7.2E-39 280.7 35.2 393 14-429 173-734 (742)
21 TIGR00891 2A0112 putative sial 100.0 2.2E-34 4.7E-39 272.1 32.0 374 7-400 11-394 (405)
22 PRK10091 MFS transport protein 100.0 1.3E-33 2.9E-38 263.6 36.7 346 8-402 3-356 (382)
23 PRK09952 shikimate transporter 100.0 3.2E-33 7E-38 265.1 39.4 385 7-429 21-433 (438)
24 PRK11195 lysophospholipid tran 100.0 1.3E-33 2.8E-38 263.9 35.8 346 8-394 3-354 (393)
25 PRK12307 putative sialic acid 100.0 1.4E-33 2.9E-38 268.2 36.0 357 7-397 17-384 (426)
26 PRK11273 glpT sn-glycerol-3-ph 100.0 3.9E-33 8.4E-38 266.0 38.6 356 47-426 59-432 (452)
27 PRK15402 multidrug efflux syst 100.0 4.3E-33 9.4E-38 262.7 38.2 342 14-397 19-371 (406)
28 PRK10504 putative transporter; 100.0 8E-33 1.7E-37 266.1 40.1 370 7-397 9-416 (471)
29 PRK03699 putative transporter; 100.0 4E-33 8.6E-38 261.6 36.4 350 5-402 4-360 (394)
30 TIGR00899 2A0120 sugar efflux 100.0 2.9E-33 6.3E-38 261.6 35.3 362 14-428 3-373 (375)
31 PRK10406 alpha-ketoglutarate t 100.0 1.2E-32 2.7E-37 261.1 39.9 375 12-430 26-425 (432)
32 PRK10054 putative transporter; 100.0 3E-33 6.6E-38 261.7 35.2 352 1-397 1-360 (395)
33 TIGR00890 2A0111 Oxalate/Forma 100.0 9.7E-34 2.1E-38 265.0 31.6 332 24-397 19-358 (377)
34 PRK12382 putative transporter; 100.0 4.5E-33 9.8E-38 261.4 35.7 362 6-428 13-388 (392)
35 PRK10077 xylE D-xylose transpo 100.0 4.5E-34 9.8E-39 275.6 28.4 411 10-434 14-462 (479)
36 PF07690 MFS_1: Major Facilita 100.0 3.8E-34 8.3E-39 265.2 26.0 342 13-387 1-352 (352)
37 TIGR00710 efflux_Bcr_CflA drug 100.0 3.5E-32 7.7E-37 255.2 38.4 343 7-392 4-357 (385)
38 TIGR00887 2A0109 phosphate:H+ 100.0 7.7E-33 1.7E-37 267.4 34.7 417 10-435 18-494 (502)
39 TIGR00711 efflux_EmrB drug res 100.0 7.1E-33 1.5E-37 267.9 33.9 371 9-396 3-410 (485)
40 TIGR00897 2A0118 polyol permea 100.0 1.9E-31 4.1E-36 250.7 40.4 373 6-428 11-400 (402)
41 PF05977 MFS_3: Transmembrane 100.0 1E-31 2.2E-36 255.0 38.6 376 6-426 8-391 (524)
42 TIGR00881 2A0104 phosphoglycer 100.0 3.8E-33 8.2E-38 261.2 28.6 360 18-401 5-376 (379)
43 PRK15075 citrate-proton sympor 100.0 8.4E-32 1.8E-36 255.6 37.8 354 6-397 13-395 (434)
44 PRK11652 emrD multidrug resist 100.0 1E-31 2.2E-36 252.4 38.0 350 1-395 1-359 (394)
45 TIGR00879 SP MFS transporter, 100.0 5.9E-33 1.3E-37 268.2 30.4 403 18-433 38-474 (481)
46 PRK15403 multidrug efflux syst 100.0 8.5E-32 1.9E-36 253.2 37.3 339 15-396 23-373 (413)
47 TIGR00895 2A0115 benzoate tran 100.0 1E-32 2.2E-37 260.1 30.2 365 13-393 22-397 (398)
48 PRK10133 L-fucose transporter; 100.0 1.3E-31 2.9E-36 253.1 37.7 345 10-397 28-408 (438)
49 PRK10473 multidrug efflux syst 100.0 4.5E-31 9.7E-36 247.9 40.0 342 8-397 3-350 (392)
50 TIGR00712 glpT glycerol-3-phos 100.0 5.1E-32 1.1E-36 257.4 33.9 365 47-432 57-436 (438)
51 PLN00028 nitrate transmembrane 100.0 5.5E-32 1.2E-36 258.9 32.9 346 8-390 36-403 (476)
52 COG2223 NarK Nitrate/nitrite t 100.0 9.7E-32 2.1E-36 237.0 31.4 371 7-428 13-400 (417)
53 PRK15011 sugar efflux transpor 100.0 3.4E-31 7.4E-36 248.2 37.0 369 7-429 14-391 (393)
54 TIGR00898 2A0119 cation transp 100.0 3.2E-32 6.8E-37 264.3 29.6 363 44-430 117-496 (505)
55 TIGR00902 2A0127 phenyl propri 100.0 5.4E-31 1.2E-35 246.0 36.3 360 10-426 6-376 (382)
56 PRK11043 putative transporter; 100.0 3.4E-30 7.4E-35 242.7 39.7 339 10-396 8-357 (401)
57 PRK03893 putative sialic acid 100.0 6.6E-31 1.4E-35 254.7 35.4 366 8-397 20-429 (496)
58 PRK09528 lacY galactoside perm 100.0 4.4E-31 9.4E-36 250.0 32.8 358 7-397 9-379 (420)
59 TIGR00892 2A0113 monocarboxyla 100.0 1.4E-31 3.1E-36 254.7 29.6 346 44-404 47-403 (455)
60 TIGR00885 fucP L-fucose:H+ sym 100.0 2.5E-30 5.5E-35 242.2 37.0 344 9-397 4-382 (410)
61 TIGR00894 2A0114euk Na(+)-depe 100.0 5.8E-32 1.3E-36 259.5 25.9 361 45-429 70-450 (465)
62 cd06174 MFS The Major Facilita 100.0 1.5E-30 3.3E-35 240.9 33.8 340 12-426 3-349 (352)
63 PRK11102 bicyclomycin/multidru 100.0 2E-30 4.4E-35 242.4 34.9 328 21-389 4-342 (377)
64 PRK15034 nitrate/nitrite trans 100.0 3.4E-30 7.4E-35 238.6 35.3 364 7-427 33-452 (462)
65 PRK11010 ampG muropeptide tran 100.0 1.5E-29 3.3E-34 242.4 38.9 375 8-430 12-404 (491)
66 KOG0569 Permease of the major 100.0 8.3E-30 1.8E-34 234.7 33.5 380 44-436 54-461 (485)
67 TIGR00883 2A0106 metabolite-pr 100.0 8.3E-30 1.8E-34 239.8 34.3 350 18-397 3-376 (394)
68 PRK06814 acylglycerophosphoeth 100.0 6.4E-30 1.4E-34 270.8 37.1 358 7-396 10-396 (1140)
69 KOG2615 Permease of the major 100.0 4.6E-31 1E-35 227.8 22.8 343 47-403 64-421 (451)
70 TIGR00896 CynX cyanate transpo 100.0 3.3E-30 7.1E-35 238.7 29.4 331 22-401 14-353 (355)
71 PRK11128 putative 3-phenylprop 100.0 3.2E-29 7E-34 234.1 35.7 333 17-397 13-356 (382)
72 TIGR00889 2A0110 nucleoside tr 100.0 2.6E-29 5.6E-34 236.4 34.7 339 13-397 7-372 (418)
73 TIGR00886 2A0108 nitrite extru 100.0 6.9E-30 1.5E-34 237.9 30.2 342 9-382 2-365 (366)
74 TIGR00882 2A0105 oligosacchari 100.0 3.1E-29 6.7E-34 235.6 33.7 356 8-397 2-371 (396)
75 KOG2532 Permease of the major 100.0 2.6E-30 5.7E-35 241.1 25.8 363 44-428 66-446 (466)
76 PRK08633 2-acyl-glycerophospho 100.0 3.3E-29 7.2E-34 266.4 37.5 358 6-395 7-383 (1146)
77 PRK11902 ampG muropeptide tran 100.0 4E-28 8.6E-33 228.3 39.9 367 13-431 4-392 (402)
78 TIGR00901 2A0125 AmpG-related 100.0 2.1E-28 4.5E-33 226.8 30.3 317 24-380 4-355 (356)
79 COG0738 FucP Fucose permease [ 100.0 6.4E-27 1.4E-31 205.1 34.5 348 9-397 14-385 (422)
80 TIGR00792 gph sugar (Glycoside 100.0 1.6E-27 3.5E-32 227.4 33.6 345 18-400 9-383 (437)
81 TIGR00924 yjdL_sub1_fam amino 100.0 3.8E-27 8.3E-32 224.7 34.2 379 5-396 7-443 (475)
82 KOG1330 Sugar transporter/spin 100.0 1.6E-29 3.5E-34 224.6 15.1 363 7-402 32-418 (493)
83 TIGR02718 sider_RhtX_FptX side 100.0 3.9E-26 8.5E-31 214.1 38.9 366 10-424 3-386 (390)
84 KOG3764 Vesicular amine transp 100.0 1.1E-29 2.4E-34 220.7 12.0 351 10-397 23-430 (464)
85 PRK10207 dipeptide/tripeptide 100.0 4.9E-26 1.1E-30 217.1 34.0 373 1-393 7-438 (489)
86 PF03825 Nuc_H_symport: Nucleo 100.0 2.9E-25 6.3E-30 205.2 35.4 368 13-425 7-391 (400)
87 KOG2533 Permease of the major 100.0 5.5E-27 1.2E-31 219.3 23.1 330 44-387 74-421 (495)
88 TIGR01301 GPH_sucrose GPH fami 100.0 1.7E-24 3.6E-29 202.3 39.6 392 10-433 6-475 (477)
89 KOG0254 Predicted transporter 100.0 7.1E-26 1.5E-30 218.9 27.2 369 51-435 89-489 (513)
90 PF00083 Sugar_tr: Sugar (and 99.9 1.6E-31 3.4E-36 255.9 -13.3 409 15-439 7-446 (451)
91 KOG0252 Inorganic phosphate tr 99.9 4.3E-27 9.2E-32 208.3 15.1 409 15-429 48-498 (538)
92 COG2807 CynX Cyanate permease 99.9 4E-24 8.8E-29 184.7 30.9 329 24-401 28-364 (395)
93 KOG2504 Monocarboxylate transp 99.9 5.9E-25 1.3E-29 207.9 28.1 365 46-418 76-472 (509)
94 PF01306 LacY_symp: LacY proto 99.9 1.1E-23 2.3E-28 190.8 34.8 385 5-432 4-404 (412)
95 PF11700 ATG22: Vacuole efflux 99.9 1.4E-23 3E-28 197.6 36.1 352 51-433 70-472 (477)
96 KOG0255 Synaptic vesicle trans 99.9 1.1E-24 2.4E-29 211.9 28.6 336 47-393 114-465 (521)
97 PRK10429 melibiose:sodium symp 99.9 4.9E-23 1.1E-27 197.4 34.5 351 15-401 13-397 (473)
98 KOG0253 Synaptic vesicle trans 99.9 8.9E-24 1.9E-28 181.8 25.9 373 44-435 106-525 (528)
99 TIGR00805 oat sodium-independe 99.9 6E-25 1.3E-29 215.3 19.9 297 16-328 41-415 (633)
100 PRK09669 putative symporter Ya 99.9 1.9E-22 4.1E-27 192.2 35.5 340 21-401 22-392 (444)
101 PRK09584 tppB putative tripept 99.9 7.8E-23 1.7E-27 196.3 32.8 369 7-390 20-438 (500)
102 TIGR00806 rfc RFC reduced fola 99.9 9E-23 1.9E-27 185.6 31.0 370 45-424 55-443 (511)
103 PRK09848 glucuronide transport 99.9 1.5E-22 3.3E-27 193.2 34.3 346 15-401 15-392 (448)
104 COG2270 Permeases of the major 99.9 3E-23 6.4E-28 183.5 26.3 375 25-431 32-431 (438)
105 PF13347 MFS_2: MFS/sugar tran 99.9 2.2E-22 4.8E-27 190.8 30.4 326 44-401 30-388 (428)
106 KOG2816 Predicted transporter 99.9 9E-22 1.9E-26 183.1 31.6 373 10-404 20-400 (463)
107 TIGR00788 fbt folate/biopterin 99.9 3.9E-22 8.5E-27 189.8 28.5 391 11-429 29-446 (468)
108 PF06609 TRI12: Fungal trichot 99.9 1.8E-21 3.9E-26 184.4 31.7 354 25-395 61-466 (599)
109 TIGR01272 gluP glucose/galacto 99.9 1E-20 2.2E-25 170.3 27.2 258 107-397 10-291 (310)
110 PTZ00207 hypothetical protein; 99.9 1.6E-19 3.5E-24 172.4 35.3 373 45-426 56-549 (591)
111 COG2211 MelB Na+/melibiose sym 99.9 3.1E-19 6.8E-24 163.4 35.0 351 15-401 19-400 (467)
112 PRK11462 putative transporter; 99.9 4.3E-19 9.4E-24 169.0 37.4 344 16-401 17-391 (460)
113 PF03209 PUCC: PUCC protein; 99.9 1.3E-18 2.8E-23 154.9 35.9 357 44-429 8-398 (403)
114 KOG4686 Predicted sugar transp 99.9 1.1E-21 2.3E-26 163.2 13.6 354 44-432 72-446 (459)
115 PRK15462 dipeptide/tripeptide 99.9 3.9E-19 8.4E-24 167.1 32.3 374 7-397 8-437 (493)
116 KOG2325 Predicted transporter/ 99.9 8.1E-20 1.8E-24 167.5 21.8 363 7-401 33-454 (488)
117 KOG2563 Permease of the major 99.8 1.3E-16 2.8E-21 142.4 22.9 321 51-398 79-423 (480)
118 PF03137 OATP: Organic Anion T 99.7 2.4E-19 5.2E-24 171.4 0.1 374 14-397 9-515 (539)
119 COG3104 PTR2 Dipeptide/tripept 99.7 2.9E-15 6.4E-20 136.2 25.0 371 7-391 20-451 (498)
120 KOG3626 Organic anion transpor 99.7 1.9E-15 4.1E-20 144.7 21.7 368 15-397 104-650 (735)
121 PF03092 BT1: BT1 family; Int 99.7 1.9E-13 4.1E-18 128.7 28.1 369 46-433 20-417 (433)
122 PRK10054 putative transporter; 99.6 2E-14 4.3E-19 134.9 18.6 151 244-395 6-157 (395)
123 PF05631 DUF791: Protein of un 99.6 3.3E-13 7.2E-18 118.7 24.5 271 15-327 41-324 (354)
124 TIGR00889 2A0110 nucleoside tr 99.6 9E-14 2E-18 131.2 18.4 184 11-198 211-410 (418)
125 TIGR00924 yjdL_sub1_fam amino 99.6 1.6E-13 3.5E-18 131.4 17.9 153 244-397 9-168 (475)
126 TIGR00880 2_A_01_02 Multidrug 99.6 1.6E-14 3.5E-19 114.6 9.1 132 57-192 4-140 (141)
127 PRK11646 multidrug resistance 99.5 3.1E-13 6.8E-18 127.0 18.0 146 249-395 14-160 (400)
128 PF07690 MFS_1: Major Facilita 99.5 3.5E-13 7.6E-18 124.8 17.8 164 252-424 3-167 (352)
129 PF01770 Folate_carrier: Reduc 99.5 6.6E-11 1.4E-15 107.3 31.1 324 56-386 46-392 (412)
130 PF06963 FPN1: Ferroportin1 (F 99.5 8.5E-11 1.8E-15 108.7 32.2 371 8-388 2-410 (432)
131 TIGR01299 synapt_SV2 synaptic 99.5 7E-13 1.5E-17 131.2 18.6 138 53-195 597-738 (742)
132 PRK10642 proline/glycine betai 99.5 6.6E-13 1.4E-17 128.3 18.2 167 20-198 262-437 (490)
133 PRK15462 dipeptide/tripeptide 99.5 8.5E-13 1.8E-17 124.6 17.9 154 243-397 7-165 (493)
134 TIGR00900 2A0121 H+ Antiporter 99.5 5.4E-13 1.2E-17 124.1 16.1 146 250-397 4-155 (365)
135 PRK10489 enterobactin exporter 99.5 5.5E-13 1.2E-17 126.4 15.5 158 238-397 10-173 (417)
136 TIGR00710 efflux_Bcr_CflA drug 99.5 1.1E-12 2.3E-17 123.1 17.3 142 254-397 14-156 (385)
137 PRK09874 drug efflux system pr 99.5 1.2E-12 2.6E-17 123.8 17.3 169 17-193 228-401 (408)
138 PRK03545 putative arabinose tr 99.5 1.7E-12 3.6E-17 122.0 18.0 130 266-397 30-160 (390)
139 PRK11663 regulatory protein Uh 99.5 2.9E-12 6.4E-17 121.9 19.5 146 250-397 28-174 (434)
140 PRK09528 lacY galactoside perm 99.5 5E-13 1.1E-17 126.8 13.6 163 25-195 240-408 (420)
141 PRK12382 putative transporter; 99.5 2.2E-12 4.8E-17 121.3 17.6 152 245-397 15-175 (392)
142 PRK10213 nepI ribonucleoside t 99.5 2.9E-12 6.3E-17 120.2 18.0 133 263-397 38-171 (394)
143 PRK10504 putative transporter; 99.5 2.2E-12 4.8E-17 124.4 17.6 151 245-397 10-161 (471)
144 PRK05122 major facilitator sup 99.5 1.3E-12 2.8E-17 123.1 15.7 154 243-397 13-175 (399)
145 TIGR02332 HpaX 4-hydroxyphenyl 99.5 5.7E-12 1.2E-16 119.0 20.0 128 267-395 29-157 (412)
146 PRK11195 lysophospholipid tran 99.5 3.7E-12 8E-17 119.4 18.5 149 244-396 2-150 (393)
147 PRK10207 dipeptide/tripeptide 99.5 2.8E-12 6.1E-17 122.9 17.9 154 243-397 12-170 (489)
148 PRK10091 MFS transport protein 99.5 2.5E-12 5.4E-17 120.4 17.1 151 245-397 3-154 (382)
149 COG2814 AraJ Arabinose efflux 99.5 5.1E-12 1.1E-16 114.0 18.1 176 245-430 13-189 (394)
150 PRK03633 putative MFS family t 99.5 5.9E-12 1.3E-16 117.9 19.0 151 244-396 5-156 (381)
151 TIGR00886 2A0108 nitrite extru 99.4 1.1E-11 2.3E-16 115.6 19.4 149 247-397 3-153 (366)
152 PRK15034 nitrate/nitrite trans 99.4 2.1E-11 4.6E-16 113.9 21.1 148 245-394 34-187 (462)
153 COG2271 UhpC Sugar phosphate p 99.4 1.6E-12 3.4E-17 115.9 12.7 168 251-428 35-205 (448)
154 PRK09584 tppB putative tripept 99.4 6.4E-12 1.4E-16 121.1 18.1 154 243-397 19-177 (500)
155 PRK11043 putative transporter; 99.4 6.5E-12 1.4E-16 118.5 17.8 145 252-397 10-157 (401)
156 PLN00028 nitrate transmembrane 99.4 2.1E-11 4.5E-16 117.2 21.2 129 265-396 56-185 (476)
157 TIGR00891 2A0112 putative sial 99.4 8.1E-12 1.8E-16 118.0 18.2 148 248-397 15-163 (405)
158 TIGR00711 efflux_EmrB drug res 99.4 6.7E-12 1.4E-16 121.6 17.4 150 250-402 7-157 (485)
159 PRK14995 methyl viologen resis 99.4 8.4E-12 1.8E-16 120.7 17.9 149 247-397 8-158 (495)
160 PRK10473 multidrug efflux syst 99.4 1.1E-11 2.3E-16 116.6 18.1 150 246-397 4-154 (392)
161 PRK03699 putative transporter; 99.4 1.1E-11 2.5E-16 116.4 17.8 148 247-396 9-157 (394)
162 TIGR00895 2A0115 benzoate tran 99.4 1E-11 2.2E-16 117.0 17.2 137 263-402 35-172 (398)
163 TIGR00892 2A0113 monocarboxyla 99.4 1.4E-12 3E-17 124.7 11.2 163 10-184 243-415 (455)
164 PRK15011 sugar efflux transpor 99.4 1.3E-11 2.8E-16 115.9 17.5 162 18-192 226-392 (393)
165 TIGR00893 2A0114 d-galactonate 99.4 4.4E-12 9.5E-17 119.4 14.4 127 270-397 18-145 (399)
166 PRK03893 putative sialic acid 99.4 1.1E-11 2.3E-16 120.5 17.2 143 27-178 294-441 (496)
167 TIGR00899 2A0120 sugar efflux 99.4 1.7E-11 3.6E-16 114.7 17.6 168 251-427 3-174 (375)
168 cd06174 MFS The Major Facilita 99.4 1.1E-11 2.3E-16 114.7 16.1 166 10-186 177-348 (352)
169 PRK11551 putative 3-hydroxyphe 99.4 1.4E-11 2.9E-16 116.6 16.8 155 22-188 234-394 (406)
170 PRK15402 multidrug efflux syst 99.4 2.9E-11 6.2E-16 114.3 18.5 134 262-397 30-164 (406)
171 TIGR00897 2A0118 polyol permea 99.4 4.4E-11 9.5E-16 112.8 19.5 152 244-397 12-169 (402)
172 PRK11102 bicyclomycin/multidru 99.4 1.2E-11 2.6E-16 115.7 15.4 133 263-397 9-142 (377)
173 TIGR00890 2A0111 Oxalate/Forma 99.4 9.3E-12 2E-16 116.3 14.3 163 9-181 206-373 (377)
174 TIGR00712 glpT glycerol-3-phos 99.4 2.6E-11 5.7E-16 115.6 17.5 149 245-396 27-180 (438)
175 PF05977 MFS_3: Transmembrane 99.4 9.7E-11 2.1E-15 112.2 20.8 164 10-184 220-388 (524)
176 TIGR00902 2A0127 phenyl propri 99.3 4.9E-11 1.1E-15 111.6 17.5 162 8-182 205-371 (382)
177 PRK11652 emrD multidrug resist 99.3 7.2E-11 1.6E-15 111.1 18.5 143 253-397 16-159 (394)
178 TIGR00903 2A0129 major facilit 99.3 5.5E-11 1.2E-15 110.0 16.2 134 261-397 7-141 (368)
179 PRK09705 cynX putative cyanate 99.3 1E-10 2.3E-15 109.8 18.4 132 263-397 27-159 (393)
180 PRK15403 multidrug efflux syst 99.3 8.7E-11 1.9E-15 110.9 17.8 152 265-426 36-188 (413)
181 PRK12307 putative sialic acid 99.3 3.9E-11 8.4E-16 114.2 15.2 148 248-397 21-169 (426)
182 PRK09556 uhpT sugar phosphate 99.3 6.3E-11 1.4E-15 114.0 16.7 132 263-396 47-184 (467)
183 TIGR00881 2A0104 phosphoglycer 99.3 1.4E-11 3E-16 115.2 11.7 135 259-395 9-145 (379)
184 TIGR00885 fucP L-fucose:H+ sym 99.3 1.7E-10 3.7E-15 108.6 18.4 148 247-396 5-156 (410)
185 KOG3762 Predicted transporter 99.3 3.3E-11 7.2E-16 110.3 12.8 156 240-397 366-523 (618)
186 KOG0637 Sucrose transporter an 99.3 4.1E-11 8.9E-16 107.7 12.4 377 8-401 32-475 (498)
187 TIGR00806 rfc RFC reduced fola 99.3 2.3E-10 5E-15 105.3 17.5 130 263-394 43-174 (511)
188 PRK11273 glpT sn-glycerol-3-ph 99.3 2.2E-10 4.9E-15 109.6 17.9 121 266-389 50-175 (452)
189 TIGR00882 2A0105 oligosacchari 99.3 1.1E-10 2.5E-15 109.8 15.2 172 244-427 1-181 (396)
190 TIGR00879 SP MFS transporter, 99.3 1E-10 2.2E-15 113.1 14.4 144 51-195 319-475 (481)
191 PRK10133 L-fucose transporter; 99.2 5E-10 1.1E-14 106.4 18.3 145 248-394 29-177 (438)
192 TIGR00769 AAA ADP/ATP carrier 99.2 2.9E-07 6.2E-12 86.5 35.3 356 10-394 9-437 (472)
193 KOG3764 Vesicular amine transp 99.2 1.6E-10 3.5E-15 102.0 11.7 146 277-431 102-249 (464)
194 TIGR00894 2A0114euk Na(+)-depe 99.2 2.5E-10 5.4E-15 109.9 14.1 121 275-396 70-193 (465)
195 PF11700 ATG22: Vacuole efflux 99.2 1E-09 2.2E-14 104.1 17.7 176 7-194 280-471 (477)
196 PRK11902 ampG muropeptide tran 99.2 1E-09 2.3E-14 103.4 17.7 142 251-396 5-156 (402)
197 TIGR00880 2_A_01_02 Multidrug 99.2 1.3E-10 2.7E-15 92.0 9.4 133 289-430 6-139 (141)
198 PF02487 CLN3: CLN3 protein; 99.2 1.7E-08 3.6E-13 91.9 24.0 320 53-390 61-391 (402)
199 PRK11128 putative 3-phenylprop 99.2 1.3E-09 2.9E-14 102.0 17.7 159 8-180 205-369 (382)
200 KOG1330 Sugar transporter/spin 99.2 2.3E-11 5E-16 109.6 5.4 153 272-432 59-212 (493)
201 PRK10406 alpha-ketoglutarate t 99.2 5E-09 1.1E-13 99.8 21.5 129 265-394 41-184 (432)
202 TIGR00883 2A0106 metabolite-pr 99.2 3E-10 6.6E-15 106.8 12.9 158 10-178 221-389 (394)
203 COG3104 PTR2 Dipeptide/tripept 99.2 6.6E-10 1.4E-14 101.8 13.5 180 243-431 19-208 (498)
204 KOG3098 Uncharacterized conser 99.1 1.1E-07 2.4E-12 88.2 27.8 305 57-391 56-409 (461)
205 PRK11010 ampG muropeptide tran 99.1 2.6E-08 5.6E-13 96.2 24.6 165 17-193 231-405 (491)
206 PRK09952 shikimate transporter 99.1 5.7E-09 1.2E-13 99.5 19.7 128 267-396 44-187 (438)
207 PRK10077 xylE D-xylose transpo 99.1 1.7E-09 3.6E-14 104.8 16.4 117 277-394 51-180 (479)
208 COG2223 NarK Nitrate/nitrite t 99.1 2.1E-09 4.6E-14 96.3 15.2 132 263-397 31-166 (417)
209 TIGR00805 oat sodium-independe 99.1 9.7E-10 2.1E-14 108.6 14.0 140 257-397 44-235 (633)
210 KOG2615 Permease of the major 99.1 7.8E-10 1.7E-14 97.2 11.5 117 277-395 64-181 (451)
211 PRK08633 2-acyl-glycerophospho 99.1 3.6E-09 7.9E-14 113.6 18.9 155 241-396 5-165 (1146)
212 TIGR00896 CynX cyanate transpo 99.1 3E-09 6.4E-14 98.7 15.9 131 263-397 18-149 (355)
213 TIGR00887 2A0109 phosphate:H+ 99.1 7.1E-09 1.5E-13 100.7 18.9 118 277-395 52-176 (502)
214 TIGR02718 sider_RhtX_FptX side 99.1 3.9E-09 8.4E-14 99.2 16.6 163 9-183 209-384 (390)
215 PTZ00207 hypothetical protein; 99.1 9.4E-09 2E-13 99.2 19.2 124 268-394 49-179 (591)
216 TIGR00901 2A0125 AmpG-related 99.1 7.1E-09 1.5E-13 96.1 17.9 163 264-431 7-180 (356)
217 PF01306 LacY_symp: LacY proto 99.1 1.3E-08 2.7E-13 93.3 18.5 182 8-197 220-407 (412)
218 COG2270 Permeases of the major 99.1 1.3E-09 2.7E-14 97.8 11.7 175 7-193 251-431 (438)
219 TIGR00898 2A0119 cation transp 99.1 4.4E-09 9.4E-14 102.5 16.8 135 58-195 362-499 (505)
220 TIGR01301 GPH_sucrose GPH fami 99.1 1E-08 2.3E-13 96.7 18.3 184 246-432 5-221 (477)
221 PRK06814 acylglycerophosphoeth 99.1 6.6E-09 1.4E-13 111.2 18.9 156 241-397 7-171 (1140)
222 PF03825 Nuc_H_symport: Nucleo 99.1 1.2E-08 2.7E-13 94.9 18.3 176 8-194 207-399 (400)
223 PRK15075 citrate-proton sympor 99.0 1.3E-08 2.8E-13 97.0 18.1 145 249-395 19-178 (434)
224 TIGR00792 gph sugar (Glycoside 99.0 5.7E-09 1.2E-13 99.7 13.7 148 8-166 222-377 (437)
225 COG0738 FucP Fucose permease [ 99.0 3.3E-08 7.2E-13 88.2 17.1 133 263-396 30-166 (422)
226 KOG2532 Permease of the major 98.9 1.3E-08 2.7E-13 96.1 12.8 123 273-396 65-190 (466)
227 KOG3810 Micronutrient transpor 98.9 6.1E-08 1.3E-12 84.3 15.5 353 64-432 55-424 (433)
228 PRK09848 glucuronide transport 98.9 9.3E-09 2E-13 98.5 11.5 150 7-165 227-384 (448)
229 KOG0569 Permease of the major 98.9 6.2E-08 1.3E-12 90.6 16.2 151 47-198 301-462 (485)
230 KOG4332 Predicted sugar transp 98.9 3E-08 6.5E-13 83.1 11.7 292 51-380 72-390 (454)
231 PF06609 TRI12: Fungal trichot 98.9 8.9E-08 1.9E-12 92.0 16.6 124 266-393 65-189 (599)
232 KOG2504 Monocarboxylate transp 98.9 4.8E-08 1E-12 93.4 13.7 171 8-191 298-476 (509)
233 PF13347 MFS_2: MFS/sugar tran 98.8 9.8E-08 2.1E-12 90.9 15.7 147 7-165 224-380 (428)
234 TIGR01272 gluP glucose/galacto 98.8 1.7E-07 3.6E-12 84.7 16.2 156 9-176 141-301 (310)
235 PRK10429 melibiose:sodium symp 98.8 1.1E-07 2.5E-12 91.5 15.6 147 250-397 11-170 (473)
236 PRK09669 putative symporter Ya 98.8 6.6E-08 1.4E-12 92.5 13.4 146 251-397 15-173 (444)
237 KOG4686 Predicted sugar transp 98.8 2.7E-07 5.9E-12 78.1 14.5 147 7-166 263-411 (459)
238 COG0477 ProP Permeases of the 98.7 7.8E-07 1.7E-11 80.5 17.7 159 13-179 7-174 (338)
239 TIGR00926 2A1704 Peptide:H+ sy 98.7 4E-06 8.6E-11 82.7 22.1 136 51-187 23-179 (654)
240 PF13000 Acatn: Acetyl-coenzym 98.7 9.7E-06 2.1E-10 74.8 22.5 375 11-397 3-468 (544)
241 PF06813 Nodulin-like: Nodulin 98.7 1.5E-06 3.2E-11 74.6 16.3 126 266-394 22-155 (250)
242 KOG3574 Acetyl-CoA transporter 98.7 3.5E-06 7.6E-11 74.5 18.5 351 7-397 30-432 (510)
243 PRK11462 putative transporter; 98.7 8.2E-07 1.8E-11 85.1 16.0 147 251-398 15-174 (460)
244 KOG2533 Permease of the major 98.7 1.1E-06 2.4E-11 83.3 16.5 155 273-430 73-228 (495)
245 PF06813 Nodulin-like: Nodulin 98.7 7.8E-07 1.7E-11 76.3 13.9 118 45-165 31-153 (250)
246 KOG0254 Predicted transporter 98.7 1.6E-06 3.6E-11 84.4 18.0 112 282-395 90-202 (513)
247 KOG3762 Predicted transporter 98.7 1.2E-07 2.6E-12 87.5 9.2 161 12-184 375-541 (618)
248 TIGR00788 fbt folate/biopterin 98.6 3.1E-06 6.7E-11 81.2 17.0 171 248-430 29-210 (468)
249 PF05631 DUF791: Protein of un 98.6 4.8E-05 1E-09 67.9 22.7 152 274-433 62-220 (354)
250 COG2211 MelB Na+/melibiose sym 98.6 5.7E-07 1.2E-11 83.5 11.0 150 7-165 235-392 (467)
251 KOG0253 Synaptic vesicle trans 98.6 5.8E-07 1.3E-11 79.2 10.3 127 60-192 390-520 (528)
252 KOG0255 Synaptic vesicle trans 98.5 9.6E-07 2.1E-11 86.4 12.3 120 274-395 111-231 (521)
253 COG2807 CynX Cyanate permease 98.5 9.2E-06 2E-10 71.9 16.1 166 10-188 210-383 (395)
254 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00098 2.1E-08 63.5 28.2 246 52-318 59-355 (491)
255 TIGR00926 2A1704 Peptide:H+ sy 98.4 2E-05 4.4E-10 77.8 17.5 137 260-397 2-151 (654)
256 PF03209 PUCC: PUCC protein; 98.4 2.1E-05 4.7E-10 71.2 15.9 166 10-183 210-391 (403)
257 PF12832 MFS_1_like: MFS_1 lik 98.4 1.6E-06 3.5E-11 59.5 6.7 69 14-90 6-74 (77)
258 KOG0252 Inorganic phosphate tr 98.3 7.1E-06 1.5E-10 74.7 11.9 116 278-394 81-204 (538)
259 PF06779 DUF1228: Protein of u 98.3 3.6E-06 7.8E-11 58.2 7.3 76 20-103 4-79 (85)
260 KOG2563 Permease of the major 98.3 3.5E-05 7.5E-10 70.3 14.3 129 267-397 66-203 (480)
261 KOG3880 Predicted small molecu 98.2 4.3E-06 9.3E-11 71.7 7.7 319 53-393 64-401 (409)
262 TIGR00939 2a57 Equilibrative N 98.2 0.00054 1.2E-08 64.7 22.3 50 340-389 378-427 (437)
263 PF05978 UNC-93: Ion channel r 98.2 3.4E-05 7.4E-10 61.0 11.9 102 57-163 43-145 (156)
264 PF00083 Sugar_tr: Sugar (and 98.2 2.4E-08 5.2E-13 95.8 -7.6 109 282-391 47-159 (451)
265 KOG2325 Predicted transporter/ 98.2 0.00012 2.6E-09 68.5 16.8 148 245-394 34-189 (488)
266 KOG2816 Predicted transporter 98.1 0.00016 3.5E-09 68.4 15.7 131 291-432 72-202 (463)
267 PF12832 MFS_1_like: MFS_1 lik 98.1 4.1E-05 9E-10 52.6 8.7 71 249-321 4-74 (77)
268 COG3202 ATP/ADP translocase [E 98.1 0.0096 2.1E-07 55.5 28.9 254 51-324 61-364 (509)
269 KOG1479 Nucleoside transporter 98.0 0.0038 8.2E-08 57.1 21.7 59 335-394 344-402 (406)
270 PF03092 BT1: BT1 family; Int 98.0 0.00028 6.2E-09 66.9 15.3 155 266-430 10-176 (433)
271 KOG1237 H+/oligopeptide sympor 98.0 0.0076 1.7E-07 58.8 25.1 132 52-184 74-239 (571)
272 PF05978 UNC-93: Ion channel r 97.8 0.0015 3.3E-08 51.7 14.0 103 290-394 46-149 (156)
273 PF01770 Folate_carrier: Reduc 97.7 0.0051 1.1E-07 56.8 17.4 133 262-395 20-154 (412)
274 COG0477 ProP Permeases of the 97.4 0.0093 2E-07 53.5 16.0 136 259-396 16-158 (338)
275 TIGR00769 AAA ADP/ATP carrier 97.3 0.031 6.7E-07 53.2 18.7 125 272-396 29-191 (472)
276 PF03137 OATP: Organic Anion T 97.3 5.7E-05 1.2E-09 73.2 -0.5 138 259-397 16-204 (539)
277 PF06779 DUF1228: Protein of u 97.2 0.0031 6.7E-08 43.8 8.0 75 261-337 8-82 (85)
278 KOG3626 Organic anion transpor 97.2 0.0033 7.1E-08 61.9 10.3 189 243-433 94-347 (735)
279 PF07672 MFS_Mycoplasma: Mycop 97.0 0.11 2.3E-06 44.6 16.4 48 139-186 2-58 (267)
280 KOG3098 Uncharacterized conser 96.8 0.022 4.8E-07 53.6 12.5 150 9-164 241-409 (461)
281 KOG2601 Iron transporter [Inor 96.8 0.062 1.3E-06 48.3 14.1 81 8-95 27-107 (503)
282 PF00854 PTR2: POT family; In 96.6 0.011 2.3E-07 55.2 9.0 102 82-184 2-117 (372)
283 KOG0637 Sucrose transporter an 96.6 0.0022 4.7E-08 59.0 3.8 145 245-391 32-200 (498)
284 PRK03612 spermidine synthase; 96.5 0.28 6.1E-06 47.8 17.7 142 251-395 20-170 (521)
285 KOG3574 Acetyl-CoA transporter 96.4 0.097 2.1E-06 47.4 12.8 141 244-389 30-188 (510)
286 PF00854 PTR2: POT family; In 96.3 0.027 5.9E-07 52.5 9.7 109 313-429 2-123 (372)
287 PRK03612 spermidine synthase; 96.2 0.31 6.7E-06 47.5 16.3 117 47-165 46-167 (521)
288 PF02487 CLN3: CLN3 protein; 96.2 0.16 3.4E-06 47.2 13.4 108 51-166 281-394 (402)
289 PF06963 FPN1: Ferroportin1 (F 95.9 0.22 4.9E-06 46.9 13.4 126 47-173 289-422 (432)
290 PF01733 Nucleoside_tran: Nucl 95.8 0.0032 6.9E-08 56.9 0.6 51 339-389 253-303 (309)
291 KOG3097 Predicted membrane pro 94.4 3.5 7.7E-05 36.9 17.1 69 63-136 70-139 (390)
292 TIGR00939 2a57 Equilibrative N 93.7 1 2.2E-05 42.9 11.5 111 51-163 307-428 (437)
293 KOG1237 H+/oligopeptide sympor 93.0 2.5 5.5E-05 41.7 13.4 146 250-396 42-220 (571)
294 PRK15015 carbon starvation pro 92.8 11 0.00023 37.3 21.9 101 61-169 11-114 (701)
295 PF03219 TLC: TLC ATP/ADP tran 92.4 5.6 0.00012 38.4 14.5 42 354-395 164-205 (491)
296 PF07857 DUF1632: CEO family ( 92.0 7.7 0.00017 33.6 16.6 27 262-288 195-225 (254)
297 KOG4332 Predicted sugar transp 91.9 0.96 2.1E-05 39.1 7.7 91 271-363 62-154 (454)
298 PF13000 Acatn: Acetyl-coenzym 89.8 2.6 5.6E-05 40.1 9.1 142 249-390 4-174 (544)
299 KOG1479 Nucleoside transporter 88.5 5.6 0.00012 37.0 10.2 128 26-163 261-399 (406)
300 KOG2881 Predicted membrane pro 86.4 16 0.00034 31.4 10.7 78 242-324 204-282 (294)
301 KOG4830 Predicted sugar transp 84.4 3 6.4E-05 36.0 5.7 147 242-388 198-349 (412)
302 PF01733 Nucleoside_tran: Nucl 82.6 0.44 9.6E-06 43.1 0.3 104 55-163 186-304 (309)
303 COG5336 Uncharacterized protei 81.9 11 0.00024 27.3 6.8 39 365-404 37-75 (116)
304 KOG3880 Predicted small molecu 79.8 7.6 0.00016 34.6 6.7 73 89-164 327-399 (409)
305 TIGR02840 spore_YtaF putative 74.3 51 0.0011 27.7 14.3 48 277-325 153-202 (206)
306 COG5336 Uncharacterized protei 73.3 9.8 0.00021 27.5 4.6 42 50-91 41-83 (116)
307 COG3202 ATP/ADP translocase [E 72.2 97 0.0021 29.9 18.3 117 279-396 59-210 (509)
308 KOG3097 Predicted membrane pro 71.3 67 0.0015 29.2 10.3 24 301-324 77-100 (390)
309 KOG3810 Micronutrient transpor 65.3 23 0.00051 32.3 6.4 92 304-396 64-156 (433)
310 COG3559 TnrB3 Putative exporte 56.0 1.8E+02 0.004 27.4 13.9 60 242-301 295-364 (536)
311 PRK13629 threonine/serine tran 54.7 2E+02 0.0044 27.5 16.9 33 136-168 17-49 (443)
312 COG4262 Predicted spermidine s 54.3 1.8E+02 0.0039 26.9 12.7 57 336-394 106-163 (508)
313 COG2836 Uncharacterized conser 51.9 1.5E+02 0.0032 25.2 15.8 40 278-318 161-203 (232)
314 PF06783 UPF0239: Uncharacteri 49.1 51 0.0011 22.8 4.5 19 169-187 23-41 (85)
315 PF02990 EMP70: Endomembrane p 47.0 3E+02 0.0064 27.2 13.3 22 289-311 305-326 (521)
316 PF07672 MFS_Mycoplasma: Mycop 46.0 1.2E+02 0.0027 26.5 7.5 103 54-157 144-253 (267)
317 cd02434 Nodulin-21_like_3 Nodu 41.6 1E+02 0.0023 26.3 6.5 12 261-272 147-158 (225)
318 PRK11469 hypothetical protein; 39.6 2.2E+02 0.0047 23.6 17.1 53 277-329 130-182 (188)
319 PF09527 ATPase_gene1: Putativ 37.4 85 0.0018 19.6 4.1 35 60-94 9-44 (55)
320 PF02694 UPF0060: Uncharacteri 35.6 46 0.001 24.2 2.9 50 53-102 56-105 (107)
321 KOG2601 Iron transporter [Inor 35.2 3.9E+02 0.0085 25.2 12.8 146 250-397 32-202 (503)
322 TIGR00814 stp serine transport 35.0 4E+02 0.0086 25.2 17.6 34 137-170 2-35 (397)
323 PF02694 UPF0060: Uncharacteri 34.4 1.2E+02 0.0026 22.2 4.7 51 281-332 54-104 (107)
324 PF11947 DUF3464: Protein of u 34.4 2.4E+02 0.0051 22.4 6.9 34 352-385 112-145 (153)
325 PF02554 CstA: Carbon starvati 32.3 4.2E+02 0.0091 24.7 21.1 57 111-169 24-83 (376)
326 cd02433 Nodulin-21_like_2 Nodu 31.5 2.5E+02 0.0054 24.2 7.2 31 140-170 20-50 (234)
327 PRK02237 hypothetical protein; 30.5 2E+02 0.0042 21.2 5.3 50 282-332 57-106 (109)
328 PRK02237 hypothetical protein; 29.6 97 0.0021 22.7 3.7 50 53-102 58-107 (109)
329 COG1268 BioY Uncharacterized c 29.1 94 0.002 25.5 4.0 22 59-80 90-111 (184)
330 COG4262 Predicted spermidine s 28.3 4.9E+02 0.011 24.2 13.4 83 51-134 43-132 (508)
331 TIGR01666 YCCS hypothetical me 27.7 6.7E+02 0.014 26.0 10.5 47 71-119 43-93 (704)
332 PF10183 ESSS: ESSS subunit of 26.3 1.2E+02 0.0025 22.3 3.8 30 166-195 57-86 (105)
333 PRK11469 hypothetical protein; 25.5 3.9E+02 0.0084 22.1 7.3 23 73-95 157-179 (188)
334 COG2962 RarD Predicted permeas 25.5 4.9E+02 0.011 23.2 10.8 55 281-338 99-153 (293)
335 COG1288 Predicted membrane pro 25.1 6.2E+02 0.013 24.3 9.9 32 356-388 407-438 (481)
336 PF01988 VIT1: VIT family; In 24.4 4.3E+02 0.0094 22.3 9.0 12 263-274 146-157 (213)
337 cd02432 Nodulin-21_like_1 Nodu 24.3 4.5E+02 0.0097 22.4 8.1 13 260-272 148-160 (218)
338 TIGR01667 YCCS_YHJK integral m 23.7 8.3E+02 0.018 25.3 10.9 49 69-119 41-93 (701)
339 PF04024 PspC: PspC domain; I 23.0 2.2E+02 0.0048 18.4 4.4 26 169-194 32-60 (61)
340 COG0814 SdaC Amino acid permea 21.4 7.1E+02 0.015 23.7 15.7 35 137-171 8-42 (415)
341 PF02632 BioY: BioY family; I 20.6 1.7E+02 0.0037 23.1 3.9 26 57-82 59-84 (148)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=282.38 Aligned_cols=370 Identities=16% Similarity=0.176 Sum_probs=303.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+..+..+.++.|.......+..+.+|++.+| +++|....|+..+.|.++..+++|+...+.||+.||++++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d--------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD--------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 3456677788888888899999999999844 47777999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH--
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA-- 163 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~-- 163 (444)
.+.++.++++++++++| ++.+.++|++.|+ +.|.+++...++ .+..|+++|++++++...+.+++.++|..++
T Consensus 84 ~l~lFi~~n~l~alAp~---f~~Ll~aR~~~g~-a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 84 LLALFIVSNLLSALAPS---FAVLLLARALAGL-AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 9999999999999 778999999999 9999999999999999999999988876555
Q ss_pred --HhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHh
Q 013378 164 --RFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 241 (444)
Q Consensus 164 --~~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (444)
.++|||++|++.+.++++..+..+..+| |++.+++ ...+.++.++ .
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-----------------------------~~~~~~~~~~-~ 207 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS-----------------------------LPGPLRTLLR-L 207 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-----------------------------CCcchhHHHH-H
Confidence 4569999999999999999999999999 2111111 0012233232 6
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
+++|+++...+..++...+.+..++|+.+++++..|+|.+..++.+..++++..+++ ..+|++.|| +.++.+.....+
T Consensus 208 l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 208 LRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred hcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999998 666999999 888888888777
Q ss_pred HHHHHHHhhhccC-CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 013378 322 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 399 (444)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 399 (444)
..+.++.+.+..+ .+.... .+++++..............+.. ++.+..+.+++....|+|..+|..++|.++|+. +
T Consensus 286 ~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g 363 (394)
T COG2814 286 LALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-G 363 (394)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Confidence 7777776666554 333333 44456665555555566666633 588999999999999999999999999999985 4
Q ss_pred cCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 400 KGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
+.. ..++.+++.+++..+.....++
T Consensus 364 ~~~-------~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 364 YAA-------TGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred hHH-------HHHHHHHHHHHHHHHHHHHHhc
Confidence 433 3366666666666665544443
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=4e-37 Score=288.45 Aligned_cols=365 Identities=14% Similarity=0.135 Sum_probs=274.1
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
++.+.+..++.........|.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQ--------SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHh--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 344444444444444555667787763 446677899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh---
Q 013378 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF--- 165 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~--- 165 (444)
+.+++++.+++++| ++.+++.|+++|+ +.+...+...++ .|++|+|||++++++.+.+.++|..+||.+++.
T Consensus 83 ~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 83 LFIASHVLSALAWN---FTVLLISRIGIAF-AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999 9999999999999 447777888899 999999999999999999999999999988765
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 166 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 166 -l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
.+||+.|++.+++.++..+..+..+||+++++++ +.++ .+..+++
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------~~~~-~~~~~~~ 204 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG---------------------------------SLKS-LPLLFRR 204 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc---------------------------------hHHH-HHHHHhC
Confidence 4899999999888766666555556664321100 1111 2335667
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
|.++......++..........+.+.|+++..|.+..+.+......+++.++++ +..+++.||+++|+.. .+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~-~~~~~~~~ 282 (390)
T PRK03545 205 PALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLL-IAIALLLV 282 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHH-HHHHHHHH
Confidence 777665555555555555556778888888889999999999999999999997 5558999999987654 34444444
Q ss_pred HHHH-hhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCC
Q 013378 325 NMFI-CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 402 (444)
Q Consensus 325 ~~~~-~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 402 (444)
+... ....++.+..+. .++.|++.....+...+.+.+..| ++++++.|+.+...++|..+||.+.|.+.|.. +.+.
T Consensus 283 ~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~ 360 (390)
T PRK03545 283 CLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSS 360 (390)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhH
Confidence 4333 333444444333 556677776667777788888766 68899999999999999999999999999976 4332
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 403 PFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
.+.+.+.+.+++.+......++
T Consensus 361 -------~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 361 -------IGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred -------HHHHHHHHHHHHHHHHHHHccc
Confidence 4456666666666665555443
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.9e-36 Score=283.64 Aligned_cols=379 Identities=12% Similarity=0.081 Sum_probs=268.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.+..+++..+++.++........|.+. +|++.+..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~--------~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMG--------KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhH--------hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 44555666666777777777777777554 3446777899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.++.+++.+++++++| ++.+++.|+++|+ +.+...|....+ .|++|+++|++++++++...++|..++|.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 79 IMVLWGIASTATMFATG---PESLYLLRILVGI-AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 446677888888 999999999999999999999999999988765
Q ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-CCCCCCcccccccccccCCCCCCCcCCccccCCch
Q 013378 166 ----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD-DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 234 (444)
Q Consensus 166 ----------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (444)
.+||+.|++.+++.++..++.++++||+|++.+. .+++++..++..+.+..+ .+++ ++...++....
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLT-LEQP-EGAFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhcccc-cccc-ccccccccccH
Confidence 3899999998888777666777788998754321 011100000000000000 0000 00000111111
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhc-cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 313 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (444)
++.++.++ ++.++...+..++.........+++|.|+++. .|.+..+.+.......++..++. +..++++||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22333344 46677777777777777888899999999873 46788888888888999988987 66689999998766
Q ss_pred H-HHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 314 L-LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 314 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
. .........++..+.....+....+. ..+.+++.....+.......|.+|+++|+++.|+.+...++|++++|.+.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 4 33344444444332222222222222 222223332333444455567889999999999999999999999999999
Q ss_pred HHHHhhhhcC
Q 013378 392 PLTALFLSKG 401 (444)
Q Consensus 392 ~l~~~~~~~~ 401 (444)
.+.|..+++.
T Consensus 391 ~i~~~~g~~~ 400 (412)
T TIGR02332 391 ILKDATGSFN 400 (412)
T ss_pred cccccCCCCc
Confidence 9998764443
No 4
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3.3e-35 Score=277.41 Aligned_cols=349 Identities=15% Similarity=0.131 Sum_probs=267.5
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
+.+.+...+++.++.....+..|.+.++. +.+..+.|++.+.+.++..++.++.|+++||+|||+++..+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQEF--------GLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 44445566777777777888888776443 5566888999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh---
Q 013378 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF--- 165 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~--- 165 (444)
+..++.+++.++++ ++.+++.|++.|+ +.+...+...++ .|++|+|+|++++++.+....+|..++|.++..
T Consensus 89 ~~~~~~~~~~~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 89 LFGLFSLATAQAWD---FPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999 9999999999999 446677788899 999999999999999999999999999988765
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 166 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 166 -l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
.+||+.|++.+++.++..+.....+||++++.+++++. + ++++..++.++ ..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------------~---~~~~~~~~~~~-~~~~ 219 (406)
T PRK11551 165 DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG---------------------K---QRAPVLRALFG-EGRA 219 (406)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc---------------------h---hhhhhHHHHhh-hhhh
Confidence 37999999888766666666666788876532221000 0 00000011111 0111
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+..+......+...........+.|.|+++. |+++.+.+......+++.++++ +..+++.||+++|+.+..+.....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVGQ-GLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGILA 297 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2223333333343444555677889998774 9999999999999999999997 5668999999999988877776666
Q ss_pred HHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 325 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.+.+...++.+.... .++.+++.+...+...++..|.+|+++|+++.|+.+....++..++|.+.|.+.++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 6666665555544433 455677777778888899999999999999999999999999999999999999864
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.5e-35 Score=281.12 Aligned_cols=390 Identities=12% Similarity=0.067 Sum_probs=269.4
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (444)
...++..+...+......+.+|.+.++ ++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLAD--------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 334455555556556667778877644 466668889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----
Q 013378 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF---- 165 (444)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~---- 165 (444)
.+++.++++++++ ++.+++.|++.|++. +...+...++ .|++|+++|++++++.+...++|..++|.+.+.
T Consensus 98 ~~~~~~~~~~~~~---~~~l~~~~~l~g~~~-g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 98 TGIINILFGFSSS---LWAFALLWVLNAFFQ-GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHhH---HHHHHHHHHHHHHHH-HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999 999999999999944 6666778889 999999999999999999999999999888776
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH-Hhccc
Q 013378 166 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC-LLRSS 244 (444)
Q Consensus 166 l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (444)
++||+.|++.+++.++..+...+.+||+|++....+..++..+ ..+.+ ++. ++++.+.++.++ ..+++
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~------~~~-~~~~~~~~~~~~~~~~~~ 242 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHD----ALELA------QQQ-EGAGLSRKEILTKYVLLN 242 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccc----ccccc------hhc-cccCCChhhhHHHHHhcC
Confidence 4899999998877665555556677887643321110000000 00000 000 001112233222 35667
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CchhHH-HH---H
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SL---G 318 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~---~ 318 (444)
+.++......++..........++|.|+++.+|++..+.+...+...+++.+++ +..|++.||+ ++|+.. .. +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~~~~~~~~~~ 321 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRGPMNLIFAAG 321 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCccHHHHHHHHH
Confidence 888887777777677777778899999988889999999999999999999997 6668999998 333222 22 1
Q ss_pred HHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 319 LFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.....++..... ..+...... .+.+|++.............|..|+++||++.|+.+...++|++++|.+.|.+.|+.
T Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 400 (434)
T PRK11663 322 ILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW 400 (434)
T ss_pred HHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc
Confidence 111111221111 112111111 222233222222333456688899999999999999999999999999999999975
Q ss_pred hhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCCC
Q 013378 398 LSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 433 (444)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (444)
++.. .+.+.+++.+++.+..+...++++
T Consensus 401 -g~~~-------~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 401 -HWTG-------FFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred -ccHH-------HHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3332 445555555555555554444443
No 6
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=4.7e-35 Score=274.29 Aligned_cols=368 Identities=13% Similarity=0.102 Sum_probs=277.7
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (444)
.+++...++..++.....|.+|.+..+. .+.+..+.|++.+...++..+.+++.|+++||+|||+++..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQ-------LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 6677888899999999999999887543 356678899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh---
Q 013378 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 166 (444)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--- 166 (444)
.+++.+.+.++++ ++.+++.|+++|+ +.+...|...++ .|+.|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGL-GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988 8999999999999 447777888899 9999999999999999999999999999988875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchh
Q 013378 167 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 246 (444)
Q Consensus 167 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (444)
+||+.|++.+...++..+...+..||.++++.+ ++.++.++..+++|+
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 209 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVR--------------------------------TPVREGMTRVLRDKR 209 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccccc--------------------------------hhhHHHHHHHHcCch
Confidence 899999988877665555555555553211000 011223334566777
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
++...+..+...........+.|.|.++..+ ++.+.+.+++..++..........++..||++.++.+..+..+..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 6655444444333333345678999888744 777888888877777666654554444456666666677777777777
Q ss_pred HHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcc
Q 013378 327 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFN 405 (444)
Q Consensus 327 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 405 (444)
+.+...++.+.... ..+.+.+.+...|...++..+..|+++||+++|+.+....+|..+||.+.|.+.|+.+++.
T Consensus 289 ~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~---- 364 (400)
T PRK11646 289 FPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALN---- 364 (400)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcC----
Confidence 76766666554433 4556777777888889999999999999999999999999999999999999999863332
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 013378 406 FPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~ 426 (444)
.....+...+.+.+++.....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 365 QPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred CcchHHHHHHHHHHHHHHHHH
Confidence 222344455555555544443
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-36 Score=263.21 Aligned_cols=368 Identities=13% Similarity=0.112 Sum_probs=286.0
Q ss_pred hhhhHHHHHHHHHHHHHHHh----HhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchH
Q 013378 7 IKTLSHLFVTVFLWGFATMM----VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (444)
||..+-++++.++.+.++.. ..-..|.+.++ .+.|..+.|++.+++.+++.++..+.|.++||.+.|+
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~--------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED--------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 44444555555555555443 34455665533 2466688999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHH
Q 013378 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTL 161 (444)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 161 (444)
.+..++++.++.+++++++++ ++.+.+..+++|. .+|.-.|.+... +.|++++|||+..++.+.+.++|..+.|.
T Consensus 96 fm~~gLilsai~nil~Gfs~s---~~~~~~l~~lng~-fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 96 FMAFGLILSAIVNILFGFSPS---LFLFAVLWVLNGW-FQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred eehHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHH-HhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 999999999999999999999 9999999999999 557777888888 99999999999999999999999998887
Q ss_pred hH--Hhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCcccc-CCch
Q 013378 162 AA--RFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK-IPSI 234 (444)
Q Consensus 162 l~--~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (444)
+. +.+ +||..|++.++++++..++.++..+|+|+...-.+-++.. +++.+..+++++++ ....
T Consensus 172 ~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~----------~d~~e~~~~~~~~~~ls~~ 241 (448)
T COG2271 172 VALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYR----------GDPLEIYEEEKENEGLTAW 241 (448)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhh----------cCchhhhhhhccCCCccHH
Confidence 77 553 8999999999999999999999999998765432111000 00000000011111 1123
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh--Cch
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEA 312 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~ 312 (444)
....+.+++||.+|.+.+..++....-+++..|.|.|+.|..|+|..+++...+.+-.+++.+. ++.|+++||. |||
T Consensus 242 ~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgrR 320 (448)
T COG2271 242 QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGRR 320 (448)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhccccc
Confidence 4456789999999999999999999999999999999999999999999999999999999997 6669999986 455
Q ss_pred hHH-HHHHHHHHHHHHHhhhccCC--chHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHH-HHHHhH
Q 013378 313 KLL-SLGLFAACINMFICSISWSA--WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSP 387 (444)
Q Consensus 313 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~ 387 (444)
... .+..+...++.+.+...++. ++... .+.+|+...+..-..-....|..|++..|++.|+...+.++ |...+.
T Consensus 321 ~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~ 400 (448)
T COG2271 321 GPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAG 400 (448)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcC
Confidence 443 34444455555555555543 33332 45557666666666666789999999999999999999999 888888
Q ss_pred HHHHHHHHhh
Q 013378 388 LIFSPLTALF 397 (444)
Q Consensus 388 ~~~g~l~~~~ 397 (444)
...|++.|.+
T Consensus 401 ~~~g~i~d~~ 410 (448)
T COG2271 401 LPLGYIADTW 410 (448)
T ss_pred CcceeeEecC
Confidence 8888888863
No 8
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.6e-35 Score=274.34 Aligned_cols=350 Identities=15% Similarity=0.155 Sum_probs=279.6
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (444)
+.++...++..++.++..+.+|.+..+. +.+..+.|++.+++.++..+++++.|+++||+|||+++..+..+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~ 73 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAG--------TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLI 73 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHH
Confidence 3466788889999999999999988554 55667889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcc-----CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 91 SIIPLAILAYRR-----SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 91 ~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
..++..+..+++ + ++.+++.|++.|+ +.+...+...++ .|+.|+++|++++++.+...++|.++||.+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 74 RAVLVAVLPFVALLGGLN---IWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 988888888776 7 8999999999999 557778889999 99999999999999999999999999998887
Q ss_pred h----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHH
Q 013378 165 F----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 240 (444)
Q Consensus 165 ~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (444)
. .+||+.|++.++..++..+..+ .+++++++++++++ . +++..++.++.++.
T Consensus 150 ~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------------~--~~~~~~~~~~~~~~ 205 (365)
T TIGR00900 150 LMYATLGIKWAIWVDAVGFAISALLIV-SVRIPELAASEIQA---------------------L--SNAVLRDTREGIKF 205 (365)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHH-hcccccCCCccccc---------------------c--chhHHHHHHhHHHH
Confidence 6 4899999888776544443333 23322111111000 0 00001122344555
Q ss_pred hccchhHHHHHHHHHHHHhhhcchh-HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
.+++|.++......++......... .+.|.|.++.+|.++.+.+.......++..++. +..+++.||.++++.+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 284 (365)
T TIGR00900 206 VLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAI 284 (365)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHH
Confidence 7788888887777777776666665 788999888789999999999999999988887 55589999999999888887
Q ss_pred HHHHHHHHHhhhccC-CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 320 FAACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+..++...+.+.++ .+.... .++.+++.+...+...++..|.+|+++|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 285 FVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777777776666553 444333 566788888889999999999999999999999999999999999999999999864
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=3.3e-35 Score=275.06 Aligned_cols=352 Identities=11% Similarity=0.029 Sum_probs=260.2
Q ss_pred HhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc
Q 013378 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (444)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (444)
....|.+|.+.+| ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.++++++
T Consensus 26 ~~~~~~lp~i~~~--------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQLRQA--------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 5566888887644 4667788999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----hhHHHHHHHHHH
Q 013378 105 SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 178 (444)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----~~~~~f~~~~~~ 178 (444)
++.+++.|+++|++. +...+....+ .|++| ++|+++++++..+..+|..+|+.+++.+ +||+.+...++.
T Consensus 97 --~~~ll~~r~l~Gig~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGVGI-GIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHhHH-HHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 999999999999954 6777778888 99887 7899999999988888888877766652 799988766555
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHH
Q 013378 179 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 258 (444)
Q Consensus 179 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (444)
.++..+ .++...+.+++++++ ++ . +.++ .+++++.+...+..++..
T Consensus 173 ~~~~~~-~~~~~~~~~~~~~~~-----------------------~~---~---~~~~----~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 173 AVVALF-AWWWQSAREVASSHK-----------------------TT---T---TPVR----VVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred HHHHHH-HHHHHhcCCCccccC-----------------------CC---c---CCcc----cccCHhHHHHHHHHHHHH
Confidence 433322 222222211110000 00 0 0011 234556666666666666
Q ss_pred hhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchH
Q 013378 259 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 338 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (444)
..+.....+.|.|+++ +|.+..+.+...+..+++.++++ +..+++.||+++|+....+..+..++...+...+.....
T Consensus 219 ~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 7777788899999987 59999999999999999999998 556899999999998888877777766655433322222
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhccC-CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHH
Q 013378 339 YATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLA 417 (444)
Q Consensus 339 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (444)
....+.+++.+...|.......+..+ ++++|+..|+.+...+++..++|.+.|++.|..++++. .+.+.+++
T Consensus 297 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~-------~~~~~~~~ 369 (393)
T PRK09705 297 LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLM-------DWAFHALC 369 (393)
T ss_pred HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH-------HHHHHHHH
Confidence 22345577777777777766666665 57889999999999999999999999999998743322 34555455
Q ss_pred HHHHHHHHHhcccCC
Q 013378 418 SMVAFIQSLMMSHTP 432 (444)
Q Consensus 418 ~~~~~~~~~~~~~~~ 432 (444)
.+.........++|+
T Consensus 370 ~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 370 VVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHhcccc
Confidence 555555545555544
No 10
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=6.5e-35 Score=276.00 Aligned_cols=349 Identities=14% Similarity=0.122 Sum_probs=271.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|.+..++...++..++.++..+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQIQMM--------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45677777888899999999999999998664 3455788999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHh-----ccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHH
Q 013378 87 PLTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGT 160 (444)
Q Consensus 87 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~ 160 (444)
+..+.+++....+. .++ ++.+++.|++.|+ +.+...+...++ .|+.|+++|+++.++.+...++|..+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 88887777665442 345 7888999999999 446666778888 9999999999999999999999999999
Q ss_pred HhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHH
Q 013378 161 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 236 (444)
Q Consensus 161 ~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (444)
.+++.+ +|++.|++.++..++.. +..+.+||++++++++ + +..++.++
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~------------------------~---~~~~~~~~ 215 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITL-LPLLRLPALPPPPQPR------------------------E---HPLRSLLA 215 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHhCCCCCCCCccc------------------------c---cchHHHHH
Confidence 988764 78999988776654443 3445567654321110 0 00112344
Q ss_pred HHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHH
Q 013378 237 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 316 (444)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (444)
.++..+++|.++...+..++... ......++|.|.++.+|.++.+.+++.+..+++..++. +..+++.||.++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLML 293 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHH
Confidence 45556777777665555444333 34567788999998789999999999999999988887 55689999877777777
Q ss_pred HHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 317 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
.+..+..++.+.+...++.+.... .++.|++.+...+...+++.+..|++.||+++|+.+...++|..+||.+.|.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 777777777776666555444333 5556777777777888899999999999999999999999999999999999999
Q ss_pred hh
Q 013378 396 LF 397 (444)
Q Consensus 396 ~~ 397 (444)
..
T Consensus 374 ~~ 375 (417)
T PRK10489 374 MM 375 (417)
T ss_pred Hh
Confidence 76
No 11
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=7.8e-36 Score=285.73 Aligned_cols=358 Identities=12% Similarity=0.054 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (444)
+..++..+......+..|.+.+ +++.+..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.++.
T Consensus 36 ~~~~~~y~~r~~~~~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 107 (467)
T PRK09556 36 IGYLTMYLIRKNFKAAQNDMIS--------TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC 107 (467)
T ss_pred HHHHHHHHHhcChhhhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH
Confidence 3334445556666677787763 44667788999999999999999999999999999999999888888777
Q ss_pred HHHHHh-----ccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--
Q 013378 95 LAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 166 (444)
Q Consensus 95 ~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-- 166 (444)
....++ +++ ++.+++.|+++|+ +.+...|...++ .|++|+++|++++++.+.+.++|.++++.+...+
T Consensus 108 ~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 108 MLGFGASLGSGSVS---LGLMIALWALSGF-FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHhcccch---HHHHHHHHHHHHH-HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 766655 577 9999999999999 446666788889 9999999999999999999999999998776431
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHH-HHH
Q 013378 167 -----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICL 240 (444)
Q Consensus 167 -----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 240 (444)
+||..|.+.+++.++..+..++..+|+|++.+..++++.. + +.. .++.++ .+ +++.+.++. .+.
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~-~---~~~--~~~~~~-~~---~~~~~~~~~~~~~ 253 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF-G---EPI--SEEDKE-TE---STDMTKWQIFVEY 253 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc-c---Ccc--chhhhc-cc---cccCcHHHHHHHH
Confidence 4888888888777666666666667765432221111100 0 000 000000 00 001111222 233
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
.+++|.+|...+..++......+...+.|.|+++.+|++..+.+.......++..++. +..|+++||+++|+.......
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHHHHH
Confidence 6788899988888888877777788999999999899999999998888888888887 666899999998887655443
Q ss_pred HHHHHHHH--hhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHH-HHHHhHHHHHHHHH
Q 013378 321 AACINMFI--CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTA 395 (444)
Q Consensus 321 ~~~~~~~~--~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~ 395 (444)
...++... +...++.+.... .++.|+..............|.+|++.+|++.|+.+...++ |.+++|.+.|.+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 33333222 222223322222 33444433333333345667999999999999999999997 77999999999999
No 12
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=271.70 Aligned_cols=370 Identities=15% Similarity=0.105 Sum_probs=272.8
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchH
Q 013378 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (444)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (444)
|++++++++.++...++..++.+...|.+|.+.++. +.|..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQE--------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 466788899999999999999999999999998554 556688999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHH
Q 013378 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTL 161 (444)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 161 (444)
++..+..+.+++..+++++++ ++.++++|+++|++ .+...+...+. .|..++++|+++++..+...++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGIG-CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999999994 46666777777 88889999999999999999999999999
Q ss_pred hHHhhhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 162 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 162 l~~~l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
+++.+.. +...+..+........ .. ..+.+++++++ + +..+.++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~------------------------~-----~~~~~~~-- 195 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAILP-LL-FTRILNQQAEN------------------------H-----DSTSIWP-- 195 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHHHH-HH-HhcccCCCCCC------------------------C-----CCCCHHH--
Confidence 9887532 2223332222211111 11 12221111000 0 0011222
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
..++|.++......+...........++|.|.++. |.++.+.+...+...+..++++ +..+++.||+++|+.+..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 196 --MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred --HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHH
Confidence 33455555444334444444555677889999875 9999999998888888888987 5568999999999988888
Q ss_pred HHHHHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhh
Q 013378 319 LFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 398 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 398 (444)
.....++...+. ..........+.+.+.....|...+.+.|..|+++++...+..+...++|..+||.+.|++.|+.
T Consensus 272 ~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~- 348 (381)
T PRK03633 272 VFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY- 348 (381)
T ss_pred HHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 777776655443 22222223455566666678999999999999888888888888889999999999999999976
Q ss_pred hcCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 399 SKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
+... .+.+.+.+.++..+..++.+++
T Consensus 349 g~~~-------~f~~~~~~~l~~~~~~~~~~~~ 374 (381)
T PRK03633 349 SDNL-------LFIMIASVSFIYLLMLLRKAGH 374 (381)
T ss_pred CccH-------HHHHHHHHHHHHHHHHHhccCC
Confidence 3332 3455555555555555444433
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.1e-34 Score=273.99 Aligned_cols=365 Identities=15% Similarity=0.101 Sum_probs=251.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHH-HHHHHHHHHHHHhhhccccccccCchHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF-QQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~-~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (444)
++.+....++.+++.++..++....|.+.++.. ++.++ ..+ ....+ +.++..+++.+++++.|+++||+|||+++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~-~~~-~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 91 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADP-SVQ-MIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCc-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 345556677889999999998888887665542 22222 111 11122 358889999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhccCchhhH--------HHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhh
Q 013378 86 LPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASF 156 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~ 156 (444)
.+.+++++++++++++++ ++ .++++|+++|++. |...+...++ .|++|+++|++..++.+.+..+|.
T Consensus 92 ~~~~l~~i~~~~~a~~~~---~~~~g~~a~~~l~~~R~l~G~g~-g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPS---YATIGIWAPILLLLCKMAQGFSV-GGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhHh-HhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999 65 3899999999955 6777888899 999999999999999998888888
Q ss_pred hhHHHhHH------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCc
Q 013378 157 VCGTLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 224 (444)
Q Consensus 157 ~~g~~l~~------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (444)
.+|+.+.. .++||++|++.+++.++ .++....+||+|++..++++.++. .+++. .
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~---------~~~~~---~ 234 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQG---------DREGL---Q 234 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhh---------ccccc---c
Confidence 88765432 24899999998766543 444556788887643221100000 00000 0
Q ss_pred CCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013378 225 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 304 (444)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (444)
++++.++++.++. ..+.+.......++....++....++|.|+++.+|++..+.+.......++..++. ...++
T Consensus 235 ---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~ 308 (490)
T PRK10642 235 ---DGPKVSFKEIATK--HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGL 308 (490)
T ss_pred ---ccccCCHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0111133433221 11222222233344456666778899999988889988877777677777777776 55689
Q ss_pred HhhhhCchhHHHHHHHHHHHH-HHHhhh--ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHH
Q 013378 305 LAPILGEAKLLSLGLFAACIN-MFICSI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 380 (444)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 380 (444)
++||+|||+.+..+.+...+. ...+.. ..+....+. .++.+++.+........+..+.+|++.|+++.|+.+....
T Consensus 309 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~ 388 (490)
T PRK10642 309 LSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV 388 (490)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH
Confidence 999999999887776543322 221222 222223332 3444555555566677778899999999999998766677
Q ss_pred HHHHHhHHHHHHHHHhh
Q 013378 381 FANIVSPLIFSPLTALF 397 (444)
Q Consensus 381 ~g~~~~~~~~g~l~~~~ 397 (444)
.++.++|.+.+++.+..
T Consensus 389 ~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 389 LVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88889999999998764
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.4e-34 Score=278.57 Aligned_cols=375 Identities=16% Similarity=0.092 Sum_probs=288.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
+++..+..+.+..++..++..++...+|.+..+. +.+..+.+|+.+.+.++...+.++.|+++||+|||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l--------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l 74 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL--------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL 74 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3345567778888999999999999999997443 55667889999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hcc-CChhhhhHHHHHHHHHHHhhhhhHHHh
Q 013378 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADN-ISERQRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~-~~~~~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
+.+..+..++++++++++| ++.++++|+++|++. +...+..... .+. .|+++|+++++++....++|..+||.+
T Consensus 75 ~~~~~~~~~~~~~~~~a~~---~~~li~~r~l~G~g~-~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~l 150 (495)
T PRK14995 75 MLGGTLFGLASLAAAFSPT---ASWLIATRALLAIGA-AMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLV 150 (495)
T ss_pred HHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999955 6666666666 555 478999999999999999999999999
Q ss_pred HHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccc----------ccccccCCCCCCC-----
Q 013378 163 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE----------TEGVNQNESNSPV----- 223 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----- 223 (444)
++.+ +||+.|++...+.++..++..+.+||+++++++ +.|...... .............
T Consensus 151 gg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~--~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 228 (495)
T PRK14995 151 GGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQ--PLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLT 228 (495)
T ss_pred HHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC--CCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 8875 899999998887777777777778876532211 111111000 0000000000000
Q ss_pred -----------cCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHH
Q 013378 224 -----------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL 292 (444)
Q Consensus 224 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 292 (444)
...+.+.+++..+ + .++++|.+....+..++......+...+.|.|+++..|+++.++|..+....+
T Consensus 229 ~~~~~~~l~~f~~~e~~~~~p~~~-~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~ 306 (495)
T PRK14995 229 LLTGALLLGLFIRTQLAASRPMID-M-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMV 306 (495)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcC-H-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 0000111112222 1 25667888777777777777777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc---CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcc
Q 013378 293 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQ 368 (444)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 368 (444)
...++. ...|++.||+++|+.+..+..+..++...+.... +.+..+. .++.|++.+...+.......+.+|++++
T Consensus 307 ~~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~ 385 (495)
T PRK14995 307 ASGFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKA 385 (495)
T ss_pred HHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhc
Confidence 988887 5568999999999988888888777766554322 3333333 5667888888888888888999999999
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 369 GKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 369 g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+.+.++.+..+++|+.+|+.+.|.+++.
T Consensus 386 g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 386 AAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.9e-34 Score=264.38 Aligned_cols=329 Identities=13% Similarity=0.018 Sum_probs=245.1
Q ss_pred HHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHH
Q 013378 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (444)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 98 (444)
.+......+.|.+|.+.+| ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+....
T Consensus 2 ~~~~~~~~~~~~lp~i~~~--------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAED--------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred hhhHHHHHHHhhHHHHHHH--------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 3456677888999988744 46667889999999999999999999999999999998776655554544333
Q ss_pred HhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHH
Q 013378 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQ 173 (444)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~ 173 (444)
...++ ++.+++.|+++|++. +.. +..... +|++|+|+|++++++.+.+..+|..+++.++..+ +||+.|+
T Consensus 74 ~~~~~---~~~l~~~R~l~G~g~-~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~ 148 (368)
T TIGR00903 74 LDPFN---YEWLLACQLLAALGQ-PFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLII 148 (368)
T ss_pred HHhcc---HHHHHHHHHHHHhHh-HHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 33367 999999999999944 554 456667 9999999999999999999999999998887775 9999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHH
Q 013378 174 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 253 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (444)
+.++++++..++.++.+||+|++++++ .+. + +..+.++.++++|.+|...+.
T Consensus 149 ~~~~l~~~~~~~~~~~lp~~p~~~~~~-----------------------~~~-~----~~~~~~~~ll~~~~~~~~~~~ 200 (368)
T TIGR00903 149 PIAAVAAAGIILVLAALPALPFQAAEG-----------------------FGF-K----DAVKEFGALAGRKDLWIIGAI 200 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC-----------------------cch-H----HHHHHHHHHHcChhHHHHHHH
Confidence 988888777777788899976543210 000 0 001124457788999999999
Q ss_pred HHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc---hhH-HHHHHHHHHHHHHHh
Q 013378 254 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---AKL-LSLGLFAACINMFIC 329 (444)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~~~ 329 (444)
.++....++++.+|+|.|+++. |++.. .+.......+.+.++. ++++||..| |+. ......+.++....+
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~-g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPA-GLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999774 78764 5665555555555554 566666543 333 222333344444444
Q ss_pred hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 330 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 330 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
....+.+.... ..+.+++.....+..+++.+|.+|++.||++.|+.+...++++.++|.+.+.+.
T Consensus 275 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 275 AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 44444433333 344456666677778899999999999999999999999999999999998777
No 16
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.1e-34 Score=271.27 Aligned_cols=370 Identities=12% Similarity=0.144 Sum_probs=268.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
|+++.+..+.+..++..++.++..|.+|.++++++ +.+..+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~-------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL-------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 45778888999999999999999999998875542 55668899999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHhc---cCc--hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhh
Q 013378 85 TLPLTLSIIPLAILAYR---RSI--SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVC 158 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~~---~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~ 158 (444)
..+.++.+++.+.+.++ ++. ..++.+++.|+++|+ +.+...+...++ .|+.|+|+|++++++.+...++|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGI-GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHh-hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 99999888877666543 221 116789999999999 447777778888 99999999999999999999999999
Q ss_pred HHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCch
Q 013378 159 GTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 234 (444)
Q Consensus 159 g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (444)
||.+++.+ +||..+++..++.++..+ . .++.++.++++ + ++.+.
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~-----------------------~-----~~~~~ 211 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLL-L---ARPRPAVPPVK-----------------------G-----ERLPF 211 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHH-H---HhcCCCCCCCC-----------------------c-----cchhH
Confidence 88887763 899888776655433222 1 12211111000 0 00012
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
++.++ +.+.......+....+.....+.+.|.++. |++ +.+......+++.++++ +..+++.||+++|+.
T Consensus 212 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 212 RRVLG------RVWPYGMGLALASIGFGTIATFITLYYAAR-GWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHH
Confidence 22221 112222222333444455567778887664 653 34556667777777776 555899999999998
Q ss_pred HHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 315 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
+..+..+..++.+.+...++.+..+. .++.|++.+..++.......|..|+++||++.|+.+...++|..++|.+.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 361 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV 361 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888887777776666554444 56678888888888888888899999999999999999999999999999999
Q ss_pred HHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCC
Q 013378 394 TALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 432 (444)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (444)
.+.. +++. .+.+.+++.+++.+.....++++
T Consensus 362 ~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 362 ASWF-GYPS-------IFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHc-CHHH-------HHHHHHHHHHHHHHHHHHhcccc
Confidence 9875 3322 44555556666666655555443
No 17
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=5.7e-34 Score=269.38 Aligned_cols=379 Identities=16% Similarity=0.172 Sum_probs=282.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
+|+|....+++..++..++.+...|.+|.+.++. +.++.+....+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL---GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 3677788888999999999999999999998775 4443333334579999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
..+....+++.+++.+.++ ++.+++.|++.|+++ +. .+....+ .|..|+++|++++++......+|..++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN---IWQFLILRALLGLLG-GF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHhh-hh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888 999999999999943 44 4667778 9999999999999999999999999999888
Q ss_pred Hh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 164 RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 164 ~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
+. .+||+.|++.+++.++..+...+.+||++++.+++ + ..+.++..+
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~------~~~~~~~~~ 213 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-----------------------E------MLHMREVVT 213 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-----------------------h------hhHHHHHHH
Confidence 76 48999999988877666666666677754321110 0 001122233
Q ss_pred HhccchhHHH-HHHHHHHHHhhhcchhHHHHHHHhhccCcCch---hHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 240 LLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 240 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
. .++++++. .....+...........+++.|..+..+.... ..+.+....+++..++. ...+++.||+++|+.+
T Consensus 214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~ 291 (408)
T PRK09874 214 S-LKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKIL 291 (408)
T ss_pred h-CcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhH
Confidence 2 34444433 33333444444445567788887775332221 23455555666777776 4558999999999998
Q ss_pred HHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 316 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
..+.....++.+.....++.+..+. .++.|++.+...|...+...+..|++++|+.+++.+...++|..+||.+.|.+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~ 371 (408)
T PRK09874 292 ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS 371 (408)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHH
Confidence 8888877777766666666555544 556788888888999999999999999999999999999999999999999998
Q ss_pred HhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 395 ALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
+.. +++. .+.+.+++.+++.+..+...+
T Consensus 372 ~~~-g~~~-------~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 372 ANY-GFRA-------VFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred hhc-chhH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 875 3332 445566666666655554333
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.8e-33 Score=263.13 Aligned_cols=326 Identities=12% Similarity=0.154 Sum_probs=249.1
Q ss_pred HHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhcc
Q 013378 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (444)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (444)
......+.+|.+. ++++.++.+.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+++
T Consensus 35 ~~~~~~~~l~~~~--------~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 106 (394)
T PRK10213 35 VEFLPVSLLTPMA--------QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN 106 (394)
T ss_pred HHHHHHhhHHHHH--------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC
Confidence 3345556777765 34467778899999999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHH
Q 013378 103 SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATI 177 (444)
Q Consensus 103 ~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~ 177 (444)
+ ++.+++.|+++|++. +...+...++ .|++|+|+|++++++.....++|..+||.+++.+ +||+.|++.++
T Consensus 107 ~---~~~l~~~r~l~G~~~-g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 182 (394)
T PRK10213 107 S---FSLLLIGRACLGLAL-GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV 182 (394)
T ss_pred h---HHHHHHHHHHHHHhh-HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 9 999999999999944 6777889999 9999999999999999999999999999888764 89999999887
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHH
Q 013378 178 VSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFS 257 (444)
Q Consensus 178 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (444)
+.++..+......||+++++++ .. ++ .+..+++|.++...+..++.
T Consensus 183 l~~~~~l~~~~~~p~~~~~~~~------------------------------~~---~~-~~~~l~~~~~~~~~~~~~~~ 228 (394)
T PRK10213 183 MGVLCIFWIIKSLPSLPGEPSH------------------------------QK---QN-TFRLLQRPGVMAGMIAIFMS 228 (394)
T ss_pred HHHHHHHHHHHHCCCCCccccc------------------------------ch---hH-HHHHhcCHHHHHHHHHHHHH
Confidence 7655554444456664321100 00 01 12355677777766655555
Q ss_pred HhhhcchhHHH-HHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCc
Q 013378 258 GLSEGGMQASF-LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW 336 (444)
Q Consensus 258 ~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (444)
.........+. |.|. +++|+++.+.+..+...+++..++. +..+++.||.+++..............++....++.+
T Consensus 229 ~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 306 (394)
T PRK10213 229 FAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKI 306 (394)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 55555555666 5555 5569999999999999999999997 5668999996544334333333344344444445555
Q ss_pred hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 337 VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 337 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.... .++.|++.+...+...+.+++..| ++++++.+......++|..+||.+.|.++|..
T Consensus 307 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 307 VATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444 566788888888989989988887 56778888888889999999999999999975
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=6.3e-35 Score=274.94 Aligned_cols=357 Identities=16% Similarity=0.140 Sum_probs=261.3
Q ss_pred HHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHH
Q 013378 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (444)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 98 (444)
+..++.....+..|.+.+ +++.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQE--------DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHHHHhhhHhHHHHHH--------hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 344455555666666543 335666788999999999999999999999999999999999999999999999
Q ss_pred HhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHH
Q 013378 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQ 173 (444)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~ 173 (444)
+++++ ++.+++.|++.|++ .+...+....+ .|++|+|+|++.+++.+...++|..++|.+++. .+||+.|+
T Consensus 77 ~~~~~---~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 152 (399)
T TIGR00893 77 AFAGA---YVSLYILRVLLGAA-EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFI 152 (399)
T ss_pred HHHcC---HHHHHHHHHHHHHH-HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHH
Confidence 99999 99999999999995 47777888899 999999999999999999999999999988876 38999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHH
Q 013378 174 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 253 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (444)
+.+++.++..+...+..||++++++..+++++....... .++.++ +++.+++ ++..+..+++|+++...+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~ 223 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGL----LAEQQG-KGPSTPK----KYQIKELLKDRRVWGLALG 223 (399)
T ss_pred HHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhh----cccccc-ccccCCC----ccchHHHhcCHHHHHHHHH
Confidence 988887666666666677765433221111110000000 000000 0011111 1123335678888888888
Q ss_pred HHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh--HHHHHHH--HH--HHHHH
Q 013378 254 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLF--AA--CINMF 327 (444)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~--~~--~~~~~ 327 (444)
.++..........+.|.|+++.+|.++.+.+.......+...++. +..+++.||+++|+ ....... .. ..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 888888888889999999998889999999999999899988887 56689999999885 1111111 11 01111
Q ss_pred Hhhh--ccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 328 ICSI--SWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 328 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.... .++.+........+.+.....+...++..|..|+++|+++.|+.+...++|..++|.+.|.+.|..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 303 MFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 1111 112222222333333333478899999999999999999999999999999999999999999875
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.3e-34 Score=280.66 Aligned_cols=393 Identities=15% Similarity=0.127 Sum_probs=275.7
Q ss_pred HHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHH
Q 013378 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (444)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (444)
.++.+...+....+.+++|.+..+. +.+..+.+++.+++.++.+++++++|+++||+|||++++++.++.++
T Consensus 173 ~l~~~~~g~d~~~is~ilp~i~~~~--------gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i 244 (742)
T TIGR01299 173 GLALMADGVEVFVVGFVLPSAEKDL--------CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF 244 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3344444555566777777776443 55567889999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-------
Q 013378 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF------- 165 (444)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~------- 165 (444)
+.++++++++ ++.++++|++.|++. +...+...++ .|++|+++|++.++++..+..+|.++++.++..
T Consensus 245 ~~ll~afa~s---~~~llv~R~l~G~g~-g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 245 FAFFSSFVQG---YGFFLFCRLLSGFGI-GGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHhh---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 999999999999955 6666889999 999999999999999999999999998876532
Q ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC---ccccccccccc----------------
Q 013378 166 ----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRP---IITEETEGVNQ---------------- 216 (444)
Q Consensus 166 ----------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~~~~~---------------- 216 (444)
.+||+.+++.+++.+ ..++..+++||+|++...+.+.++ ..++..+.+..
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~l-l~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCV-FAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 258999988877654 445566789999987433222221 11111110000
Q ss_pred CCCCC---CCcCCcc--------cc---CCchHHHHHHhccc---hhHHHHHHHHHHHHhhhcchhHHHHHHHhhc----
Q 013378 217 NESNS---PVKIPVC--------KK---IPSIRDLICLLRSS---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ---- 275 (444)
Q Consensus 217 ~~~~~---~~~~~~~--------~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 275 (444)
.++.+ +..+... +. ....+..++.++++ ++.+.+.+..+...+.++++..|+|.++++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~ 479 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADD 479 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 00 00111122223332 3344556667777788888899999775331
Q ss_pred c-----------------CcCc----------------------------------------------------------
Q 013378 276 F-----------------HFNK---------------------------------------------------------- 280 (444)
Q Consensus 276 ~-----------------g~~~---------------------------------------------------------- 280 (444)
+ +++.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 559 (742)
T TIGR01299 480 YAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENT 559 (742)
T ss_pred HHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcccc
Confidence 0 0000
Q ss_pred -----------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHH
Q 013378 281 -----------------------------------NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 325 (444)
Q Consensus 281 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (444)
........+.+++.+++. ++.+++.||+|||+++..+.++.+++
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 560 DFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred chhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 011233445567777776 66689999999999999999999988
Q ss_pred HHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCc
Q 013378 326 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 404 (444)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 404 (444)
.+++.+.++....+. .++.+++.+...+..+.++.|.+|++.|++++|+.+....+|.+++|.+.|.+.+..
T Consensus 639 ~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~------- 711 (742)
T TIGR01299 639 CFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT------- 711 (742)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------
Confidence 888877766444443 455677777778889999999999999999999999999999999999999887642
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 405 NFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
...++++.+++.+++.++...++
T Consensus 712 --~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 712 --KAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhCC
Confidence 12255666666666666666553
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.2e-34 Score=272.08 Aligned_cols=374 Identities=13% Similarity=0.138 Sum_probs=267.4
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.+..+++..+.+.++.....+..|.+.++. +.+..+.|++.+++.++..+++++.|+++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF--------GLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45566777888899999999999999886443 5666788999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.++.+++.++++++++ ++.+++.|++.|++. +...+...++ .|++|+++|+++.++.+...++|..+++.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPG---YITMFIARLVIGIGM-GGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHhhh-hhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999944 6677788899 999999999999999999999999999988765
Q ss_pred h----h--hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 166 L----S--TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 166 l----~--~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
+ + ||+.|++.++..++ .+.....+||++++++++++.+...+..++..+ +++..++..++ ......+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 231 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG---GEHRIANIVMT---LAAAMVQ 231 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc---cchhhhhhhhh---hhHHhhh
Confidence 3 4 99999887655433 344455677765432221111000000000000 00000000000 0000000
Q ss_pred Hhccch-hHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 240 LLRSSV-TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
...+++ .+........+.+........++|.|+++.+|++..+.+.+....+++.+++. +..+++.||+++|+.+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 232 SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVCS 310 (405)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHHH
Confidence 011111 12222333333344444566788999988889999999999999999999997 5558999999999988777
Q ss_pred HHHHHHHHH-HhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 319 LFAACINMF-ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
.....+... .+....+.+.... .++.+.......+....++.|.+|+++|+++.|+.+...+++..++|.+.|.+.|.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 311 LLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665533322 2333333333333 34455555666777788899999999999999999999999999999999999998
Q ss_pred hhhc
Q 013378 397 FLSK 400 (444)
Q Consensus 397 ~~~~ 400 (444)
.+.+
T Consensus 391 ~g~~ 394 (405)
T TIGR00891 391 LDEY 394 (405)
T ss_pred cccc
Confidence 7334
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.3e-33 Score=263.65 Aligned_cols=346 Identities=13% Similarity=0.149 Sum_probs=258.6
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+.++.+....+....+.....|.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 74 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDV--------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFL 74 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHc--------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 4567777888888888899999999887443 55667889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF- 165 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~- 165 (444)
..+.+++.++++++++ ++.+++.|+++|+ +.+...+....+ .|+.|+++|++++++...+..+|..+||.+++.
T Consensus 75 ~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 75 VALCVIGNAMFTLSSS---YLMLAIGRLVSGF-PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 9999999999999999 9999999999999 446666777788 999999999999999999999999999888766
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhc
Q 013378 166 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 242 (444)
Q Consensus 166 ---l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (444)
.+||+.|++.+++.++..+..++.+||.+++++. +.++.++ ..
T Consensus 151 ~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------------~~~~~~~-~~ 196 (382)
T PRK10091 151 SQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---------------------------------GLREQFH-FL 196 (382)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---------------------------------CHHHHHH-Hh
Confidence 3899999999887766666666667775321100 0011122 23
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
+++..+......++..........+.+.|+++.+|+++.+.+.+....+++.++++ +..+++.||+++++.+..+..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 197 RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHHH
Confidence 44555554444444444444445667778887789999999999999999999997 56689999999999988888777
Q ss_pred HHHHHHhhh-ccCCchHHH-HHHHHhhhhhhhHHHH-HHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 013378 323 CINMFICSI-SWSAWVPYA-TTAFSVLVVFATPSFR-SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 399 (444)
Q Consensus 323 ~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 399 (444)
.++.+.+.. .++.+.... .++.+.+.....+... ....+..|++.++.+ ..+...++|..+||.+.|.+.|...+
T Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~ 353 (382)
T PRK10091 276 VLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLA 353 (382)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccC
Confidence 777655543 333333322 3344444443344333 344444454555544 34677899999999999999997534
Q ss_pred cCC
Q 013378 400 KGA 402 (444)
Q Consensus 400 ~~~ 402 (444)
++.
T Consensus 354 ~~~ 356 (382)
T PRK10091 354 YNY 356 (382)
T ss_pred cch
Confidence 443
No 23
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3.2e-33 Score=265.09 Aligned_cols=385 Identities=13% Similarity=0.113 Sum_probs=258.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.....++..+++.++......+.|.+..+.+.++.++. ..........++..+++.+++++.|+++||+|||+++..
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHH
Confidence 4455566677888888888877777766554332222321 111111223356667888999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhH--------HHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhh
Q 013378 87 PLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFV 157 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~ 157 (444)
+..++++++++++++++ ++ .+++.|+++|++. |...+....+ .|+.|+|+|++..+..+.+..+|.+
T Consensus 100 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~R~l~G~~~-g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 100 TVWMMGIATALIGLLPS---FSTIGWWAPVLLVTLRAIQGFAV-GGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhhh-cccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999 55 5889999999944 6666778889 9999999999999999999999998
Q ss_pred hHHHhHH------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcC
Q 013378 158 CGTLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 225 (444)
Q Consensus 158 ~g~~l~~------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (444)
+++.+.. .++||++|++.+++.++ .+......||++++.+++++. ++
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~~~~~~~~~~--------------------~~ 234 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESAEFEQQQHEQ--------------------AA 234 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHHhhc--------------------cc
Confidence 8865543 25899999988776533 334444567765432211000 00
Q ss_pred CccccCCchHHHHHHhccchhHHHHHH-HHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013378 226 PVCKKIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 304 (444)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (444)
. +++.+.. +.++++|+.+.... ..+...+..+....+.|.|.++.+|++...........++...++. ...|+
T Consensus 235 -~-~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g~ 308 (438)
T PRK09952 235 -A-KKRIPVI---EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFAW 308 (438)
T ss_pred -c-cccCCHH---HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0 0000111 12344555544433 3444455566677889999988889888765555555666666675 55589
Q ss_pred HhhhhCchhHHHHHHHHHHHHHHHhhh---ccC-CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHH
Q 013378 305 LAPILGEAKLLSLGLFAACINMFICSI---SWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS 379 (444)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 379 (444)
++||++||+.+..+.++..++.+.+.. ..+ .+.... .++.+++.+...+..+++..|.+|++.|+++.|+.+...
T Consensus 309 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~ 388 (438)
T PRK09952 309 LADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVA 388 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHH
Confidence 999999999888776665544332222 122 222222 334466667777888899999999999999999876554
Q ss_pred -HHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 380 -SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 380 -~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
.+++.++|.+.+++.+..++ ++ . ..+...+++.+++.+..+..+
T Consensus 389 ~~lgg~~~p~i~g~l~~~~~~-~~----~-~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 389 SVVGGGFTPFIAAALVTYFGG-SW----H-SVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-Cc----h-HHHHHHHHHHHHHHHHHHHcc
Confidence 58999999999999886421 11 1 133444445555555555443
No 24
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.3e-33 Score=263.92 Aligned_cols=346 Identities=12% Similarity=0.115 Sum_probs=256.3
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.++.++++.++..++........+.+.++. +.+..+.+++.+.+.+++.+..++.|+++||+|||++++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKEL--------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 3567788889999988777777677665443 34446789999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
..+.+++.+.+.++.+ . ++.|+++|+ +.+...|+..++ .|++|+|+|++++++.+...++|.++||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~-~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGI-GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888877766 4 678999999 558888999999 9999999999999999999999999999999885
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhcc
Q 013378 167 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 243 (444)
Q Consensus 167 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (444)
.|+..+.+.+...++. .+..+.+||+++++++++ .+..+...+.++..+.+++
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~ 203 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS-----------------------WNPIALLRDFFHACRVLWR 203 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC-----------------------CCHHHHHHHHHHHHHHHHh
Confidence 3455555554443222 344466777653221110 0000000122333445667
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
+|.+........+............|.|+++.+|.++.+.|......+++.++++ +..+++.||.++++.+..+... .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~~-~ 281 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGILM-G 281 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHHH-H
Confidence 7776665555444455555556677888888899999999999999999999997 5558999998888877776533 3
Q ss_pred HHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc-chhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 324 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
+....+...++.+.... .++.|++.+...+..++..++..|++. +|++.++.+..++++..++..+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 282 LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33334444444443333 456788888777888888888766554 799999999999999999999988663
No 25
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=268.18 Aligned_cols=357 Identities=13% Similarity=0.121 Sum_probs=256.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.+...++..+.+.++.....+.+|.+.++. +.++.+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADL--------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 44566667777788888888888888876443 5666788999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.++.+++..+++++++ ++.++++|+++|++. +...+....+ .|++|+|+|+++.++.+.+.++|.++++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~g~-g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 89 SIVAYSVGTGLSGLASG---VIMLTLSRFIVGMGM-AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHH-hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999 999999999999954 6666788888 999999999999999999999999999887765
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHh
Q 013378 166 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 241 (444)
Q Consensus 166 ----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (444)
.+||+.|++..... +..+......||++++++++ .+ +++++ .+..++ ..+...+..
T Consensus 165 l~~~~~w~~~f~i~~~~~-~~~~~~~~~~p~~~~~~~~~--~~----------~~~~~----~~~~~~---~~~~~~~~~ 224 (426)
T PRK12307 165 FAEAYGWRAAFFVGLLPV-LLVIYIRARAPESKEWEEAK--LS----------GKGKH----SQSAWS---VFSLSMKGL 224 (426)
T ss_pred HcccCCHHHHHHHHHHHH-HHHHHHHHHCCCChHHHHhh--hh----------ccccc----cccchh---hhhHHHHHH
Confidence 48999998865432 22222222334433211110 00 00000 000000 111123335
Q ss_pred ccchhHHHHHHHHH---HHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 242 RSSVTLSQAAVVAF---FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 242 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
++++.++....... ...........++|.|+++. |+++.+.+...+...++.++++ +..+++.||+++|+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 55666554333222 22222233567889998775 9999998988888889988887 5568999999999988888
Q ss_pred HHHHHHHHHHhhhccCC-chHHHHHHHHhh--hhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 319 LFAACINMFICSISWSA-WVPYATTAFSVL--VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
..+..+..+......+. .......+++.+ .....+....++.|.+|+++||++.|+.+...++++.++|.+.|++.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 303 LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 77766655544433322 222222333332 223345566778999999999999999999999999999999999998
Q ss_pred hh
Q 013378 396 LF 397 (444)
Q Consensus 396 ~~ 397 (444)
..
T Consensus 383 ~~ 384 (426)
T PRK12307 383 TM 384 (426)
T ss_pred cc
Confidence 75
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=3.9e-33 Score=266.03 Aligned_cols=356 Identities=13% Similarity=0.081 Sum_probs=246.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhcc----CchhhHHHHHHHHhhhhccc
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR----SISFFYAYYALRTLTAMVCE 122 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~~ 122 (444)
+.+..+.|++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+.+++.+ + ++.+++.|++.|++ .
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~l~gi~-~ 134 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWF-Q 134 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccccc---HHHHHHHHHHHHHH-H
Confidence 66678899999999999999999999999999999999999999999998888764 5 78889999999994 4
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhh-hhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASF-VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 196 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~-~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 196 (444)
+...+..... .|++|+++|++++++.+.+.++|. +.+|+++.. .+||+.|++.+++.++..++..+++||++++
T Consensus 135 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 135 GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred hccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 6666666777 999999999999999999999886 456654322 3899999998887777666777778887654
Q ss_pred CCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHH-HHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhc
Q 013378 197 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ 275 (444)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (444)
...+++++. .+ +..++.++ ++ ++..+.++. .+..++++.+|...+..++.....+....++|.|+++.
T Consensus 215 ~~~~~~~~~-~~---~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~ 283 (452)
T PRK11273 215 CGLPPIEEY-KN---DYPDDYNE----KH---EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV 283 (452)
T ss_pred cCCCChhhh-hh---cccccccc----cc---CCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221111100 00 00000000 00 001122332 23367788898888888777777777888999999988
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CchhHH-HHHHHHHHHHHHHhhhcc--CCchHHH-HHHHHhhhh
Q 013378 276 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVV 349 (444)
Q Consensus 276 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~ 349 (444)
.|++..+.+.......++..++. ++.|+++||+ +||... .....+..++.+.+.... +.+..+. ...++....
T Consensus 284 ~g~s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 362 (452)
T PRK11273 284 KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIY 362 (452)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHH
Confidence 89999888888888888888886 5668999998 444332 222222333333222222 2222222 233333332
Q ss_pred hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHH-hHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHH
Q 013378 350 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV-SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
........+..|.+|++.||+++|+.+...++|+.+ +|.+.|.+.|+. +++. .|.+.+...+++++...
T Consensus 363 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~-------~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 363 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDG-------GFMVMIGGSILAVILLI 432 (452)
T ss_pred hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchH-------HHHHHHHHHHHHHHHHH
Confidence 233334456779999999999999999999998765 799999999987 4332 33445455555555444
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.3e-33 Score=262.72 Aligned_cols=342 Identities=12% Similarity=0.075 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHH
Q 013378 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (444)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (444)
.+..++..++...+.|.+|.+.++. +.+..+.++..+.+.++..+++++.|+++||+|||+++..+..+.++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 19 VLFEFATYIANDMIQPGMLAVVEDF--------NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHhhhhhHhcchHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 3444555667888889999877443 55667889999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhh
Q 013378 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 168 (444)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~ 168 (444)
+.+.+.++++ ++.+++.|+++|+ +.+...+...++ .|.+|+++|.+..++......+|..+||.+++. .+|
T Consensus 91 ~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 91 TCLAILLAQS---IEQFTLLRFLQGI-GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHcc---HHHHHHHHHHHHh-HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9999999999 8999999999999 446666778888 999999999999999988888888999888765 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHH
Q 013378 169 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 248 (444)
Q Consensus 169 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (444)
|+.|++.+++.++..+..++..||++++++++ . +..+..+.++..+++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~----~~~~~~~~~~~~~~~~~~~ 218 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEK------------------------L----SLKELGRDYKLVLKNRRFV 218 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCcccccc------------------------c----cHHHHHHHHHHHHcCcHHH
Confidence 99999988887666665656667654321110 0 0012233445577888888
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHH
Q 013378 249 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 328 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (444)
...+..++..........+.|.|+++.+|+++.+.+.......++..++. +..+++.||+++|+.+..+.+...++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 219 AGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 77776666665555666778888888889999998888777777777776 55689999999999988888777766665
Q ss_pred hhhcc-----CCchHH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 329 CSISW-----SAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 329 ~~~~~-----~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.... +.+... ...+.+++.+...+..+..... .+++++|++.+..+..+.++..+|+.+.+.+++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 298 AALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 55422 222222 2556677777777766666544 34589999999999999999999999999988764
No 28
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=8e-33 Score=266.11 Aligned_cols=370 Identities=13% Similarity=0.060 Sum_probs=279.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.++.+....++..++.....+.+|.+.++. +.+..+.|++.+.+.++..++.++.|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSL--------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 44667788888888888899999999998553 5566778999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+..+.+++.+++.++++ ++.+++.|+++|++. +...+...++ .|++|+++|+++.++.....++|..+||.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT---LNELLLARVLQGVGG-AMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHhCC---HHHHHHHHHHHHhhh-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999988 899999999999944 7777888888 999999999999999999999999999988876
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccc-----------ccccccCCCCCC--------
Q 013378 166 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE-----------TEGVNQNESNSP-------- 222 (444)
Q Consensus 166 ----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-------- 222 (444)
.+||+.|++......+..+......|+.+....+ .|...... .+..+.......
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR---FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAV 233 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC---CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHH
Confidence 4899999998877666655555555554322211 11110000 000000000000
Q ss_pred ----------CcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHH
Q 013378 223 ----------VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL 292 (444)
Q Consensus 223 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 292 (444)
+++...++..+. .+++||.++......++..........+.|.|+++..|.++.+.++......+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 308 (471)
T PRK10504 234 GVVALLLYLLHARNNNRALFSL-----KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVL 308 (471)
T ss_pred HHHHHHHHHHHHhcCCCCccCH-----HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 000000111111 15678888887777777777776667788999988789999999988888777
Q ss_pred HHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc-CCch--HH-HHHHHHhhhhhhhHHHHHHHhhccCCCcc
Q 013378 293 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-SAWV--PY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQ 368 (444)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 368 (444)
...++. ...+++.||+++|+.+..+..+..+...++.+.. ..+. .. ..++.|++.+...+..+....+.+|++++
T Consensus 309 ~~~~~~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (471)
T PRK10504 309 GSMGMK-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLA 387 (471)
T ss_pred HHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhc
Confidence 777775 5558999999999999888887776665555432 2222 22 24455677778888888999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 369 GKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 369 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
|+++|+.++...+|..+|+.+.|.+.+..
T Consensus 388 g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 388 SSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887
No 29
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=4e-33 Score=261.56 Aligned_cols=350 Identities=13% Similarity=0.097 Sum_probs=265.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
+++|..+..++..++.........+.+|.+.++ ++.+..+.+++.+.+.++..+++++.|+++||+|||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~--------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEY--------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 334556666677777777777788888887644 366668889999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
..+.++.+++.++++++++ ++.+++.|+++|+ +.+...+...++ .|++|+++|+++++..+...++|..++|.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~---~~~~~~~~~l~G~-~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHS---LALFSIAMFVLGV-VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHcch---HHHHHHHHHHHHH-hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 8999999999999 446666778888 9999999999999999888888888888776
Q ss_pred Hh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 164 RF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 164 ~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
+. .+||++|.+.+++.++..++.++ ++.|+.+++++ + +. ++ .. ++
T Consensus 152 ~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~---------------~-~~---~~-~~------~~-- 201 (394)
T PRK03699 152 AYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP---------------K-AD---KP-VA------KE-- 201 (394)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc---------------c-cc---Cc-cc------cc--
Confidence 54 48999999888776554433322 22222111100 0 00 00 00 00
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
..++.++...+..++..........+.|.|+++.+|+|+.+.+.+.+...++..+++ +..+++.||+++|+.+...
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 202 ---KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred ---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHH
Confidence 112445555556666666666778899999988889999999999998888888987 5568999999999988877
Q ss_pred HHHHHHHHHHhhhccCCchHH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 319 LFAACINMFICSISWSAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..+..+...++...++.+... ..++.|++.+..++...+...+..| +++++..|......++|..++|.+.|++.|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~ 356 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF 356 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 776666666655555544333 3566677777778888888887776 45678889999999999999999999999976
Q ss_pred hhcCC
Q 013378 398 LSKGA 402 (444)
Q Consensus 398 ~~~~~ 402 (444)
+...
T Consensus 357 -g~~~ 360 (394)
T PRK03699 357 -GLQA 360 (394)
T ss_pred -Cchh
Confidence 4443
No 30
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=2.9e-33 Score=261.59 Aligned_cols=362 Identities=14% Similarity=0.114 Sum_probs=264.7
Q ss_pred HHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH-HHHHhH
Q 013378 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI 92 (444)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~ 92 (444)
.+..++..++.++..|.+|.+.+++ ++.+..+.|++.+++.+...+.+++.|+++||+||||.++. +.....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 4557888899999999999987443 35666889999999999999999999999999999887654 556666
Q ss_pred HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHH--HHHHHHHHHhhhhhHHHhHHh----
Q 013378 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASA--FGILLGVLSASFVCGTLAARF---- 165 (444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~--~~~~~~~~~lg~~~g~~l~~~---- 165 (444)
++.++++++++ ++.+++.|++.|.+. +...|...++ .|+.|+++|++. .+......++|..+||.+++.
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSSFA-STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77788889998 888999999988844 5566778888 888887777754 577888888999999888775
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccch
Q 013378 166 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 245 (444)
Q Consensus 166 l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (444)
.+||+.|++.+++.++..+..++.+||++++++++ ++ +.+.++ .+++|
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~-----~~~~~~----~~~~~ 199 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA-----------------------LT-----RLEVRG----LLASR 199 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc-----------------------cC-----cchhhh----hhcCc
Confidence 48999999998877666666666788865432211 00 001111 33455
Q ss_pred hHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHH
Q 013378 246 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 325 (444)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (444)
+++......++..........+.|.|+++.+|.++.+.+...........++. ...+++.||+++|+.+..+.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 55554444444444444456678888888889999998888777666666665 55689999999999888777666655
Q ss_pred HHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCc
Q 013378 326 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 404 (444)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 404 (444)
...+...++.+.... ..+.+++.+...+....+..|..|+ +++++.|+.+...++|..++|.+.|.+.+.. +++.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~-- 354 (375)
T TIGR00899 279 YTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHA-- 354 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh--
Confidence 555544455554443 4555777777778888888888875 5679999999999999999999999999875 3332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhc
Q 013378 405 NFPGFSIMCIGLASMVAFIQSLMM 428 (444)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~ 428 (444)
.+.+.+++.+++.+...+.
T Consensus 355 -----~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 355 -----VYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred -----HHHHHHHHHHHHHHHHhee
Confidence 3455555555555554443
No 31
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=261.13 Aligned_cols=375 Identities=12% Similarity=0.041 Sum_probs=248.7
Q ss_pred HHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHh
Q 013378 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (444)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (444)
...+..+++.++...+....|.+.++....+.++ .+..+.+.+.+...++..+++++.|+++||+|||+++..+..++
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 103 (432)
T PRK10406 26 GASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTT--TQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3445677888888887777776655542111122 22234455566677777799999999999999999999999999
Q ss_pred HHHHHHHHhccCch-----hhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH-
Q 013378 92 IIPLAILAYRRSIS-----FFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR- 164 (444)
Q Consensus 92 ~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~- 164 (444)
++++++++++++.. .+..+++.|+++|+ +.|...+...++ .|+.|+++|++..++.+.+...|.++++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGL-SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHh-hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998821 12368999999999 447777889999 99999999999999998888888887765432
Q ss_pred -----------hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCc
Q 013378 165 -----------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 233 (444)
Q Consensus 165 -----------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (444)
..+||++|++.+++.++. +.....+||+++++.++ . ++..+
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~-----------------------~----~~~~~ 234 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQETRA-----------------------L----KEAGS 234 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHHHhh-----------------------h----ccccc
Confidence 358999999888776543 33444566654321110 0 00112
Q ss_pred hHHHHHHhccchhHHHHHHHHHH-HHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch
Q 013378 234 IRDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 312 (444)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 312 (444)
+++ ++++++.+...+...+ ....++....++|.|+++.+|.+..+.+.......+...+++. ..|+++||++||
T Consensus 235 ~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l~Dr~grr 309 (432)
T PRK10406 235 LKG----LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQP-LIGALSDKIGRR 309 (432)
T ss_pred HHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCch
Confidence 333 4456666654444433 3556667788999999888899998888888887888888864 458999999999
Q ss_pred hHHHHHHHHHHHHHHHhh--hc--cCCchHHHHHH-HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHH-HHHHh
Q 013378 313 KLLSLGLFAACINMFICS--IS--WSAWVPYATTA-FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVS 386 (444)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~ 386 (444)
+.+..+..+..+....+. .. ++.+....... .....+...+..+.+.+|.+|++.|+++.|+.+...+. .+...
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~ 389 (432)
T PRK10406 310 TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSA 389 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHH
Confidence 877665554333322111 11 12222222222 22233334456677889999999999999999887665 34457
Q ss_pred HHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 387 PLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 387 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
|.+.+.+ +..+.+. ..++..++..+++.+..+..++
T Consensus 390 p~~~~~l-~~~g~~~-------~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 390 EYVALSL-KSIGMET-------AFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHH-HHhCCCc-------HHHHHHHHHHHHHHHHHHHhhh
Confidence 7777744 5431111 1234444455555555444433
No 32
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=3e-33 Score=261.65 Aligned_cols=352 Identities=15% Similarity=0.172 Sum_probs=272.1
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCc
Q 013378 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (444)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (444)
||.+. ||.++.+.+..++...+.+...|.+|.+++++ ++.+..+.|++.+.+.++..+++++.|+++||+||
T Consensus 1 ~~~~~-~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~ 72 (395)
T PRK10054 1 MNLSL-RRSTSALLASSLLLTIGRGATLPFMTIYLSRQ-------YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDK 72 (395)
T ss_pred CCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 55444 66778888889999999999999999988553 35666888999999999999999999999999999
Q ss_pred hHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH
Q 013378 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG 159 (444)
Q Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g 159 (444)
|++++.+.++..++.++.+++++ ++.+++.|.+.|. ..+...+...++ .|..|+++|++++++.....++|..+|
T Consensus 73 k~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 73 KRYMLLAITAFASGFIAIPLVNN---VTLVVLFFALINC-AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred chhHHHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 8888888988887 335666778888 999999999999999999999999999
Q ss_pred HHhHHhh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHH
Q 013378 160 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 236 (444)
Q Consensus 160 ~~l~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (444)
|.+++.+ +|+.+|++.+++.++..+...+.+||++++++++ ++ + . .+
T Consensus 149 p~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-----------------------~~---~---~-~~ 198 (395)
T PRK10054 149 PPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-----------------------TG---S---V-WS 198 (395)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-----------------------hh---h---h-hh
Confidence 9998875 8999999888776665555555566654321110 00 0 0 01
Q ss_pred HHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhc--cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH
Q 013378 237 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
.+...++|+++......++..+.......+.+.|..+. .+.+....+.......+.....+ ...+++.||.++|+.
T Consensus 199 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 199 -PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPL 276 (395)
T ss_pred -hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhH
Confidence 12356778887777777776666555555666666432 35556666777777776666665 455799999999998
Q ss_pred HHHHHHHHHHHHHHhhhc-cCCchHH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHH
Q 013378 315 LSLGLFAACINMFICSIS-WSAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 392 (444)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 392 (444)
+..+..+..++...+... ++.+... ...+.+++.+...|...+.+.+..|++.++++.+..+ ...+|..+||.++|.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 888887777777666654 3343333 3566778877778888889999999999999998655 677999999999999
Q ss_pred HHHhh
Q 013378 393 LTALF 397 (444)
Q Consensus 393 l~~~~ 397 (444)
++|+.
T Consensus 356 l~~~~ 360 (395)
T PRK10054 356 ILTTL 360 (395)
T ss_pred HHHHc
Confidence 99986
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=9.7e-34 Score=264.96 Aligned_cols=332 Identities=16% Similarity=0.094 Sum_probs=253.0
Q ss_pred HHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccC
Q 013378 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (444)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 103 (444)
.....+..|.+.++ ++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++
T Consensus 19 ~~~~~~~~~~~~~~--------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPLGRY--------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 34455667766533 3666788999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHHHHHHH
Q 013378 104 ISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIV 178 (444)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~~~~~~ 178 (444)
++.+++.|++.|++. +...+..... .+++| |+|+++.++...+.++|..+++.+.+. .+||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASAGV-GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhHHH-HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999944 6555666777 88876 679999999999999998765444433 3799999999988
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHH
Q 013378 179 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 258 (444)
Q Consensus 179 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (444)
.++..+..++.+||+++++++++ .+ .+++ +...+...+++.++......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~----------------------~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTN----------------------IE-VSVK----DYTVWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHHHHHHHHHheecCchhccccC----------------------cc-cchh----hhhHHHHHcCccHHHHHHHHHHHh
Confidence 77776666666666543221110 00 0000 011223556777776666655555
Q ss_pred hhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCch-
Q 013378 259 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV- 337 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 337 (444)
........+.+.|.++ +|.+..+.+.......+...+++ +..+++.||++||+.+..+.....++.+.+...++...
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDV 296 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhH
Confidence 5555555667777655 58888888888899999999987 55589999999999988888888888777666554322
Q ss_pred -HHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 338 -PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 338 -~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
... ..+.+++.+...+...++..|.+|+++|+++.|+.+...++|..++|.+.|.+.+..
T Consensus 297 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 297 LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 212 344566666667777788999999999999999999999999999999999999876
No 34
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.5e-33 Score=261.45 Aligned_cols=362 Identities=15% Similarity=0.152 Sum_probs=260.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHH
Q 013378 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (444)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (444)
+++.++.+.+..++..++.++..|.+|.++.++ ++.+..+.|++.+++.++..+++++.|+++||+||||++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL 85 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH
Confidence 466778888888999999999999999887543 3566688999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHH---Hhc-----cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhh
Q 013378 86 LPLTLSIIPLAIL---AYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASF 156 (444)
Q Consensus 86 ~~~~~~~~~~~~~---~~~-----~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~ 156 (444)
.+.+...++.+.. .+. ++ ++.+++.|+++|+ +.+...+...++ .|+.|+|+|++++++.+.+.+.|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~ 161 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFK---FALLVVGRLILGF-GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGAL 161 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHH
Confidence 9988777665433 222 34 7899999999999 446666778888 999999999999999999999999
Q ss_pred hhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCC
Q 013378 157 VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 232 (444)
Q Consensus 157 ~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (444)
.+||.+++. ++||+.+.+..+..++.. ...++.++.++++ + +++
T Consensus 162 ~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------------------~-----~~~ 209 (392)
T PRK12382 162 AAGAPLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTVRKVPAHA-----------------------G-----ERP 209 (392)
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhccCCCCCc-----------------------c-----cCc
Confidence 999988876 478877665544432221 1122221111000 0 000
Q ss_pred chHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch
Q 013378 233 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 312 (444)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 312 (444)
+.++..+.+++ +. ...++..........+.|.|+++. |++. .+......+++.++++ +..+++.||+++|
T Consensus 210 ~~~~~~~~~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~ 279 (392)
T PRK12382 210 SLWSVVGLIWK-PG-----LGLALQGVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGGV 279 (392)
T ss_pred hHHHHHHHHHH-hH-----HHHHHHHHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCCC
Confidence 12222222221 11 122223334445567778888764 6653 4555666677777776 5558999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 313 KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
+.+..+..+..++.+.+...++.+..+. ..+.+++.+...+...+...|..|+++||++.|+.+...++|..++|.+.|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 280 KVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred eehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888888777766665544443 556677777778888888899999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhc
Q 013378 392 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 428 (444)
Q Consensus 392 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (444)
.+.|+. +++. .+.+.+.+.+++.+.....
T Consensus 360 ~l~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 360 MLATSF-GYPS-------VFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHh-CchH-------HHHHHHHHHHHHHHHHHhh
Confidence 999976 4333 3355555555555554433
No 35
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=4.5e-34 Score=275.64 Aligned_cols=411 Identities=14% Similarity=0.108 Sum_probs=264.4
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
.....++.+.+.++...+.+..|.+.++...+...+++.+..+.+++.+++.++.+++++++|+++||+|||++++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~ 93 (479)
T PRK10077 14 TLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAV 93 (479)
T ss_pred HHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34445566777777888888888877665433345667888899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhc---------cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH
Q 013378 90 LSIIPLAILAYR---------RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG 159 (444)
Q Consensus 90 ~~~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g 159 (444)
+..++.+.++++ ++.+.++.+++.|+++|+ +.|...+...++ .|++|+++|++++++.+.+..+|..++
T Consensus 94 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 94 LFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI-GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred HHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh-hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 999988887763 222225678899999999 447777889999 999999999999999999999999988
Q ss_pred HHhHHh------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCc
Q 013378 160 TLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPV 227 (444)
Q Consensus 160 ~~l~~~------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (444)
+.++.. .+||++|++.+++.++.. +..+++||+|++..++++.++..+..++... .++ . +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~-~~~--~-~--- 244 (479)
T PRK10077 173 YFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMG-NTL--A-T--- 244 (479)
T ss_pred HHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcC-Chh--H-H---
Confidence 876542 489999999887765554 4456789987643221111111000000000 000 0 0
Q ss_pred cccCCchHHHHHH-hccchhHH-----HHHHH----HHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHH
Q 013378 228 CKKIPSIRDLICL-LRSSVTLS-----QAAVV----AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 297 (444)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 297 (444)
...++.++..+. ..+.+..+ ..... .+...........+.|.+.++ .|.+...........++...++
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~ 322 (479)
T PRK10077 245 -QALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTF 322 (479)
T ss_pred -HHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHH
Confidence 000001111000 00001100 00100 111111112223445665554 5888777677667777788888
Q ss_pred HHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc--C-CchHH--HHHHHHhhhhh-hhHHHHHHHhhccCCCcchhH
Q 013378 298 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--S-AWVPY--ATTAFSVLVVF-ATPSFRSIVSKQVGPNEQGKA 371 (444)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~--~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~ 371 (444)
. +..+++.||+|||+.+..+.++.+++.+.+.... + .+... ..++.+.+.+. ..|..+.+++|.+|+++|+++
T Consensus 323 ~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 401 (479)
T PRK10077 323 T-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKA 401 (479)
T ss_pred H-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHH
Confidence 6 6668999999999999999888888777665332 2 22111 23333333332 347788999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCCCC
Q 013378 372 QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPAS 434 (444)
Q Consensus 372 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (444)
.|+.+..++++.++++.+.+.+.+. ++..........+.+.++..+++.+..+...+|+++
T Consensus 402 ~g~~~~~~~~g~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 402 LAIAVAAQWIANYFVSWTFPMMDKN--SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhc--cchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 9999999999999998877655521 000000011124455555555555555555555443
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=3.8e-34 Score=265.17 Aligned_cols=342 Identities=24% Similarity=0.323 Sum_probs=262.2
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhH
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (444)
+++..++..++.....|.+|.+.. ++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLA-------EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHH-------CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH-------HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 356678888899999999994332 3446666788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----h
Q 013378 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 167 (444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~ 167 (444)
++..+..++++ .+.+++.|++.|+ +.+...+...++ .|++|+|+|++++++.+...++|..+||.+++.+ +
T Consensus 74 ~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 74 LGSLLLAFASN---FWLLLIARFLLGI-GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred hHHHHhhhhhh---HHHHhhhcccccc-ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 99777777677 7899999999999 447778889999 9999999999999999999999999999998874 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhH
Q 013378 168 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 247 (444)
Q Consensus 168 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (444)
||+.|++.+++.++..++.....++++++++++++.++. ++.+++.++.++.+++++.+
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE---------------------SKKPKPLKPGFKSLFKNPVL 208 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----------------------HHHCCCH-CTHHHHHHCC
T ss_pred cccccccccchhhhhhhhHhhhhhhcccccccccccccc---------------------cccccccccccccccccchh
Confidence 999999999887777665445666655444332110000 00111112223345666766
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcC-chhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
|......+...........+.|.|+++.+|++ ..+.+......++...++. +..+++.||+++++..........+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 65555555555666678899999988888999 7888988999999999886 555899999998777666666655555
Q ss_pred HHhhhcc---CCc-hHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhH
Q 013378 327 FICSISW---SAW-VPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 387 (444)
Q Consensus 327 ~~~~~~~---~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 387 (444)
+.+.... +.. .....++.|++.+...+...++..+.+|++++|++.|+.+...+++..++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 288 LGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5444333 223 333466778888889999999999999999999999999999999999987
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=3.5e-32 Score=255.18 Aligned_cols=343 Identities=16% Similarity=0.152 Sum_probs=265.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++....+....++..++.....|.+|.+.++. +.+..+.|++.+++.++..+++++.|+++||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 75 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADL--------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL 75 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 44455555556677788899999999887544 5566788999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.++..++.+.+.++++ ++.+++.|++.|+ +.+...+...++ .|++|+++|++++++.+....+|..+||.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 76 GLFIFALSSLGLALSNN---IETLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHHHHHHHHcc---HHHHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 446677788899 999999999999999999999999999988876
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHh
Q 013378 166 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 241 (444)
Q Consensus 166 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (444)
+ +||+.|++.++..++..+..++..||++++++++ +.+...+.++..
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~ 202 (385)
T TIGR00710 152 ILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI-----------------------------QISTYFETFLLL 202 (385)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-----------------------------CHHHHHHHHHHH
Confidence 3 8999999888777666666666667654322110 000112234446
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
+++|+++...+...+..........+.|.++++.+|.++.+.+.+.....++.++++ +..+++.||+++|+.+..+..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHH
Confidence 677888776666666666666667778888888889999999999998888888887 5568999999999988887777
Q ss_pred HHHHHHHhhhcc----CCc-hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHH
Q 013378 322 ACINMFICSISW----SAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 392 (444)
Q Consensus 322 ~~~~~~~~~~~~----~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 392 (444)
..++.+++.... +.+ .... ..+.+++.+...+.......|..| ++++++.++.+.....++.+.+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 282 FAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666655554322 112 2222 445677778888888888888776 679999999998887766666666663
No 38
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=7.7e-33 Score=267.37 Aligned_cols=417 Identities=13% Similarity=0.109 Sum_probs=264.3
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
..+..+..+.+.++.+......|.+..+.. .++.+.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 18 ~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~ 94 (502)
T TIGR00887 18 IVIAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELI 94 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 444556677888888888888887654421 12334556677999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCch---hhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 90 LSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+..++.++++++++.. .++.+++.|+++|++. +...+....+ .|++|+++|+++.++.+....+|.++++.++..
T Consensus 95 ~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 95 IMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGI-GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888876421 1578999999999944 7777888999 999999999999999999999999988876542
Q ss_pred ---------------------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC-cc---ccccc-c
Q 013378 166 ---------------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRP-II---TEETE-G 213 (444)
Q Consensus 166 ---------------------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~---~~~~~-~ 213 (444)
.+||++|.+.+++.++ ..+..+++||+|++...+++.++ .. .+... +
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i-~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~ 252 (502)
T TIGR00887 174 VLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL-ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK 252 (502)
T ss_pred HHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH-HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc
Confidence 2699999888777644 44456789999986432222111 11 11100 0
Q ss_pred -cccCCCCCCCcCCccccCCchHHHHHHhccchh---HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHH----
Q 013378 214 -VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD---- 285 (444)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 285 (444)
.++.++.++.+++.+..+.++++.++...+++. .+......+...+.+++...+.|.++++ .|++..+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~ 331 (502)
T TIGR00887 253 IEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYE 331 (502)
T ss_pred cccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHH
Confidence 000000000000001111234444332212222 1111222333344455566678888865 4776542211
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC---CchHHH-HHHH-Hhhhhhhh
Q 013378 286 --------LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS---AWVPYA-TTAF-SVLVVFAT 352 (444)
Q Consensus 286 --------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~-g~~~~~~~ 352 (444)
......++.+++. +..+++.||+|||+.+..+..+..++..++....+ ...... ..+. .++.....
T Consensus 332 ~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (502)
T TIGR00887 332 ELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPN 410 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC
Confidence 1222233444454 56689999999999988887777766655543221 111111 1111 22223345
Q ss_pred HHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC---CCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 353 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG---APFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
+..+.+..|.+|++.|+++.|+.+...+++++++|.+.+.+.+.....+ ... .....+.+.+++.+++.+..+++
T Consensus 411 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~i~~~~l- 488 (502)
T TIGR00887 411 ATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI-WMGHVLEIFALFMFLGILFTLLI- 488 (502)
T ss_pred chhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc-cchHHHHHHHHHHHHHHHHheEe-
Confidence 6677888999999999999999999999999999999999987531110 001 11224455555555555554444
Q ss_pred cCCCCC
Q 013378 430 HTPASS 435 (444)
Q Consensus 430 ~~~~~~ 435 (444)
+|++.+
T Consensus 489 pEt~~~ 494 (502)
T TIGR00887 489 PETKGK 494 (502)
T ss_pred ccCCCC
Confidence 455443
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=7.1e-33 Score=267.91 Aligned_cols=371 Identities=11% Similarity=0.079 Sum_probs=285.1
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
.+..+.+..++..++..+..+.+|.+.++. +.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDL--------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 345667778888899999999999987554 555577899999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
++..++.++++++++ ++.+++.|+++|++. +...+...++ .|++|+++|++++++......+|..+||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~---~~~l~~~~~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 75 FAFTLGSLLCGVAPN---LELMIIFRVIQGFGG-GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 999999999999999 999999999999944 6777888999 9999999999999999999999999999988874
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccc-----------cccccccCCCCCCCc--------
Q 013378 167 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITE-----------ETEGVNQNESNSPVK-------- 224 (444)
Q Consensus 167 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-------- 224 (444)
+||+.|++.+.+.++..+...+..||+++.+.+ +.|+.... .....++++..++..
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASE--NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITG 228 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccC--CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHH
Confidence 899999998888776666666677775432211 11111000 000000000000000
Q ss_pred --------CCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHH
Q 013378 225 --------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 296 (444)
Q Consensus 225 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 296 (444)
..+.+++++..+ . ..+++|.++...+..++..+.......+.|.|+++.+|+++.+.+.......++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~ 306 (485)
T TIGR00711 229 LVAIIAFVVWELTDDNPLVD-L-RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPML 306 (485)
T ss_pred HHHHHHHHHHHHcCCCCccC-H-HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 000001111111 1 245677777777777777777777888999999998999999999999999999888
Q ss_pred HHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc--cC--CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhH
Q 013378 297 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--WS--AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 371 (444)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 371 (444)
+. ...+++.||+++|+.+..+..+..++..++.+. ++ .+.... ..+.|++.+...+.......+..|++++|++
T Consensus 307 ~~-~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~ 385 (485)
T TIGR00711 307 SS-PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARG 385 (485)
T ss_pred HH-HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHH
Confidence 87 555899999999999988888888877766532 21 222222 5667888888777777788888999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 372 QGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 372 ~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
.|+.+..+++|+.+|+.+.|.+.++
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 40
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.9e-31 Score=250.75 Aligned_cols=373 Identities=12% Similarity=0.129 Sum_probs=264.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHH
Q 013378 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (444)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (444)
++|.+...+++.++...+.+...+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~ 82 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKAL--------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM 82 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHh--------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 578888889999999999888888888887443 566678899999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHH---hc-cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhh-hhH
Q 013378 86 LPLTLSIIPLAILA---YR-RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASF-VCG 159 (444)
Q Consensus 86 ~~~~~~~~~~~~~~---~~-~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~-~~g 159 (444)
.+..+.+++.+++. +. ++ ++.+++.|++.|++. +...+...+. .+..|+|+|++++|+.+...++|. .+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~g~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGLGY-PLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHcch-HHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988876553 32 45 788889999999954 5555667777 899999999999999999999997 578
Q ss_pred HHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchH
Q 013378 160 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 235 (444)
Q Consensus 160 ~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (444)
|.+++. ++|+..++.......+..++..+..+|.+++++++ + ++ +..+.+
T Consensus 159 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~----~~----~~~~~~ 212 (402)
T TIGR00897 159 SYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ------------------T----RE----KFSELG 212 (402)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc------------------C----Cc----chhhHH
Confidence 888765 46665555444333333333344445432211110 0 00 001222
Q ss_pred HHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 236 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
+..+.++++|.++...+..++..........+.|.|.++ +|++..+.+.......++..++. +..|+++||+++|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHH
Confidence 334457788888887777777777777788899999866 69999998888888888889997 5558999999988765
Q ss_pred H-HHHHHHHHHHHHhhh-----ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHH
Q 013378 316 S-LGLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 388 (444)
Q Consensus 316 ~-~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 388 (444)
. .+.....++.+.+.. .++.+..+. .++.|++.+...+ ..+...+. ++++||++.|+.+...++++.++|.
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHH
Confidence 3 333333332222221 122333322 4555666655444 34555665 5578999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhc
Q 013378 389 IFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 428 (444)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (444)
+.|.+.|.. +.. ..+.+.+++.+++.....+.
T Consensus 369 i~g~l~~~~-g~~-------~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 369 IAVLFIGFF-GAI-------GVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHhhc-chH-------HHHHHHHHHHHHHHHHHHHh
Confidence 999999975 221 14455555555555555444
No 41
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=1e-31 Score=255.01 Aligned_cols=376 Identities=16% Similarity=0.189 Sum_probs=302.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHH
Q 013378 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (444)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (444)
++|.+..++.+.+++.+|..+....++.++.+. +-|+...+++.++..++.++.+++.|.++||++|||+++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l--------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL--------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 467888999999999999999999999998665 445578899999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhc--cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHh
Q 013378 86 LPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
.+.++.++..+..++. .+....+.+++.-++.|+ +.+...|+.+++ .|..|+++..+++++.+...++..++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9998877665544432 111127899999999999 558899999999 999999999999999999999999999999
Q ss_pred HHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 163 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
+|.+ |-.+.|.+.++..++... .....+.++++++. ..++..+++++.+
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~-~l~~~~~~~~~~~~--------------------------~~e~~~~~l~~G~ 211 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISIL-ALLRWKPPPPPSSL--------------------------PRERFFSALREGL 211 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcccccccccc--------------------------chhhhhhhHHHHH
Confidence 9874 668888888766544333 33333332211111 0112234678888
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
+..+++|.+...++..++.++........+|.+.++.+|.++...|++.+..+++.+++. +..+++.+|+++++++..+
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLA 290 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHH
Confidence 999999998887777777777766777889999999999999999999999999999998 4558999999999988888
Q ss_pred HHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 319 LFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+..+++.+.+++.++.+.... .++.|++........++..++..|++.||++++++++....+..+|..+.|.+.+..
T Consensus 291 ~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 291 SLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888888888888777665 566788888888899999999999999999999999999999999999999999986
Q ss_pred hhcCCCcccchhHHHHHHHHHHHHHHHHH
Q 013378 398 LSKGAPFNFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
+.. ..+.+.++..+++.+...
T Consensus 371 -g~~-------~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 371 -GVR-------TALLIAGAALLLSALIAL 391 (524)
T ss_pred -CHH-------HHHHHHHHHHHHHHHHHH
Confidence 322 234455554444444443
No 42
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.8e-33 Score=261.15 Aligned_cols=360 Identities=14% Similarity=0.080 Sum_probs=260.4
Q ss_pred HHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHH
Q 013378 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (444)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (444)
+..........+..|.+.++ ++.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEE--------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHH--------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 34455566666667766533 3556678899999999999999999999999999999999999999999999
Q ss_pred HHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHH-HhHHh----hhhHHH
Q 013378 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGT-LAARF----LSTTSA 171 (444)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~-~l~~~----l~~~~~ 171 (444)
++++++ ++.+++.|++.|++. +...+...++ .|++|+++|++++++.+...++|..++| .++.. .+||+.
T Consensus 77 ~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T TIGR00881 77 FGFSTS---LWVMAALWALNGIFQ-GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWV 152 (379)
T ss_pred HHHhhh---HHHHHHHHHHHHhhc-cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhH
Confidence 999999 999999999999944 6777888889 9999999999999999999999999998 45443 489999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHH
Q 013378 172 FQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAA 251 (444)
Q Consensus 172 f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (444)
|++.+++.++..+..++..||++++++.++++++. .+ +.++. +++.+++....+...+..+++|.++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP-NE------EPDGD---AEKKEEELTKKQIFLQYVLLNKVLWYIS 222 (379)
T ss_pred HHHHHHHHHHHHHHHheeeCCCccccccCccccCc-cc------ccccc---cccccccccchHHHHHHHHhcchHHHHH
Confidence 99888777666666666777765443221111000 00 00000 0000111112233344567788888888
Q ss_pred HHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc-hhH-HHHH-HHHHHHHHHH
Q 013378 252 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKL-LSLG-LFAACINMFI 328 (444)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~-~~~~~~~~~~ 328 (444)
+..++..........+.|.|+++.+|+++.+.+.......+...++. +..+++.||..+ |+. .... .....++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMALIIVSLLV 301 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 88887777777888899999998889999999999999999998987 556899998643 332 2211 1222222222
Q ss_pred hhhcc--CCchHH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 329 CSISW--SAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 329 ~~~~~--~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
..... +.+... ..++.|.......+....+..|.+|+++||++.|+.+...++|+.++|.+.|.+.|.. +++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~ 376 (379)
T TIGR00881 302 YWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWA 376 (379)
T ss_pred HhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-ccc
Confidence 22211 222222 2344455444555666778899999999999999999999999999999999999976 443
No 43
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=8.4e-32 Score=255.64 Aligned_cols=354 Identities=13% Similarity=0.034 Sum_probs=239.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHH-HHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLS-GFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~-g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
|++....+++..+++.++.....+..|.+.++. +.++.+...... -.......+...+++++.|+++||+|||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTF---FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 455667778899999999999999999887765 222222211110 1122333445567889999999999999999
Q ss_pred HHHHHHhHHHHHHHHhccCchhhH--------HHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhh
Q 013378 85 TLPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSAS 155 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg 155 (444)
+.+..+..++..+++++++ ++ .+++.|+++|++. +...+....+ .|++|+++|++++++.+...++|
T Consensus 90 ~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~l~~~R~l~G~~~-g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g 165 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPG---YATIGLAAPLLVLLGRLLQGFSA-GVELGGVSVYLAEIATPGRKGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhhccc-cccHHHHHHHHHhhCCcccchHHHHHHHHHHHHH
Confidence 9999999999999999998 55 4689999999944 6666778889 99999999999999998888877
Q ss_pred hhhHHHhHHh------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCC
Q 013378 156 FVCGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPV 223 (444)
Q Consensus 156 ~~~g~~l~~~------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (444)
..+|+.+++. ++||++|++..... ..........||+++..+++
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~----------------------- 221 (434)
T PRK15075 166 VVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARK----------------------- 221 (434)
T ss_pred HHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhh-----------------------
Confidence 7776665543 48999998755432 22222222222221100000
Q ss_pred cCCccccCCchHHHHHHhccchhHHHH-HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHH
Q 013378 224 KIPVCKKIPSIRDLICLLRSSVTLSQA-AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFM 302 (444)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (444)
++. +.++.++...++++.+.. ....+...........+.|.|+++.+|++..+.++......++..++. ...
T Consensus 222 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 294 (434)
T PRK15075 222 HRP------SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-PIG 294 (434)
T ss_pred hcc------ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHH
Confidence 000 011112223334433332 233334445555678889999998889999888888888888888886 556
Q ss_pred HHHhhhhCchhHHHHHHHHHHHHHH-Hh-hhccCCc--hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHH
Q 013378 303 PLLAPILGEAKLLSLGLFAACINMF-IC-SISWSAW--VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 377 (444)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 377 (444)
|+++||++||+....+..+..+... .. ....+.. .... ..+.+++.+...+....+..|.+|++.|+++.|+.+.
T Consensus 295 g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~ 374 (434)
T PRK15075 295 GALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYS 374 (434)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHH
Confidence 8999999999987765544332211 11 1112222 2222 3344566666667777888999999999999999765
Q ss_pred HHH-HHHHHhHHHHHHHHHhh
Q 013378 378 ISS-FANIVSPLIFSPLTALF 397 (444)
Q Consensus 378 ~~~-~g~~~~~~~~g~l~~~~ 397 (444)
... +++.++|.+.|++.|..
T Consensus 375 ~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 375 LATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHhhhHHHHHHHHHHhc
Confidence 555 45888999999999986
No 44
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1e-31 Score=252.41 Aligned_cols=350 Identities=15% Similarity=0.103 Sum_probs=261.7
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCc
Q 013378 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (444)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (444)
||.++.+|.+.......++..+......|.+|.+.++. +.+..+.+++.+.+.++..+++++.|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDL--------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 55555566666667777777788888899999887443 6666888999999999999999999999999999
Q ss_pred hHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH
Q 013378 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG 159 (444)
Q Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g 159 (444)
|+++..+..+..++..++.++++ ++.+++.|++.|++. +...+....+ .|.+++++|+++.+..+.+..+|..+|
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGLGT-GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHhhh-hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999944 6666777788 999999999999999999999999999
Q ss_pred HHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchH
Q 013378 160 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 235 (444)
Q Consensus 160 ~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (444)
|.+++.+ +||+.|++.++..++..+...+..||++++++++ ++.+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 197 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------------------------------TRVL 197 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------------------------------hHHH
Confidence 9887763 8999999988776655555556677754321110 0123
Q ss_pred HHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 236 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
+.++..+++|+++...+..+........+....+.++++.+|.++.+.+.......++..+++ ...+++.||.+++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~ 276 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMWQ 276 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 444556777877765555555554455556667788888789999998988877777777776 5558889988733322
Q ss_pred HHH-HHHHHHHHHHhhhc--cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 316 SLG-LFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 316 ~~~-~~~~~~~~~~~~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
... .....+........ .+.+.... ..+.+++.+...|...+...+..| +++|++.++.+....+|..+++.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 12222222222221 22333333 566678888889999999988887 67899999999999999999998888
Q ss_pred HHHH
Q 013378 392 PLTA 395 (444)
Q Consensus 392 ~l~~ 395 (444)
.+.+
T Consensus 356 ~~~~ 359 (394)
T PRK11652 356 MLPQ 359 (394)
T ss_pred HccC
Confidence 7654
No 45
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.9e-33 Score=268.25 Aligned_cols=403 Identities=14% Similarity=0.097 Sum_probs=263.3
Q ss_pred HHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHH
Q 013378 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (444)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (444)
++..++.....+.+|....+.-.....+.+.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 117 (481)
T TIGR00879 38 LMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAIL 117 (481)
T ss_pred HhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 44455566677777766655411111222355688999999999999999999999999999999999999999999999
Q ss_pred HHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH---Hh----hhhH
Q 013378 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA---RF----LSTT 169 (444)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~---~~----l~~~ 169 (444)
+.+..+...++.+++.|+++|++. +...+...++ .|++|+++|++++++.+.+.++|..+++.++ .. .+||
T Consensus 118 ~~~~~~~~~~~~~~~~r~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~ 196 (481)
T TIGR00879 118 MGLAAFALSVEMLIVGRVLLGIGV-GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWR 196 (481)
T ss_pred HHHhccccchHHHHHHHHHHHhhh-hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHH
Confidence 876554322678999999999954 6777788889 9999999999999999999999999999998 33 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCC-c----------CCccccCCchHHHH
Q 013378 170 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPV-K----------IPVCKKIPSIRDLI 238 (444)
Q Consensus 170 ~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~ 238 (444)
+.|++.++..+ ..+...+++||+++....+++.++..+...+....+++..+. + .+.+..++..++.+
T Consensus 197 ~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAG-LLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHH-HHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 99999665543 444455678887643211111111000000000000000000 0 00000011112211
Q ss_pred HHhcc---chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 239 CLLRS---SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
+ ..+ ++.++...+..+...........+.|.+.++ .|++..+.+.......++.+++. +..+++.||+++|+.+
T Consensus 276 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~ 352 (481)
T TIGR00879 276 S-STRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPLL 352 (481)
T ss_pred h-cCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHH
Confidence 1 111 2233333333333333334445566666654 59999888888888888888887 5558999999999998
Q ss_pred HHHHHHHHHHHHHhhh---ccC-------CchHH-HHHHHHhhhh-hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHH
Q 013378 316 SLGLFAACINMFICSI---SWS-------AWVPY-ATTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 383 (444)
Q Consensus 316 ~~~~~~~~~~~~~~~~---~~~-------~~~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 383 (444)
..+..+..++.+.+.. ... .+... ...+++.+.+ ...+....+..|.+|+++|+++.|+.+...++++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~ 432 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLAN 432 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHH
Confidence 8887777777666552 111 11111 2222222222 3346667777999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCCC
Q 013378 384 IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 433 (444)
Q Consensus 384 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (444)
+++|.+.+.+.+.. ++...+ .+.+++++++.+......++++
T Consensus 433 ~i~~~~~~~~~~~~-~~~~~f-------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 433 FIVGFLFPTMLESI-GVGGVF-------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHHhc-Ccccee-------hhHHHHHHHHHHHHheecccCC
Confidence 99999999998875 443333 5555555555555555544443
No 46
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=8.5e-32 Score=253.22 Aligned_cols=339 Identities=12% Similarity=0.080 Sum_probs=250.8
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (444)
+..+...++..++.|.+|.+.++. +.+..+.++..+++.+++.+++++.|+++||+|||++++.+.++.+++
T Consensus 23 ~~~~~~~~~~~~~~p~l~~i~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 94 (413)
T PRK15403 23 LYDFAAYLTTDLIQPGIINVVRDF--------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA 94 (413)
T ss_pred HHHHHHHHHHHhhccCHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH
Confidence 344556667788899999876443 555577899999999999999999999999999999999999999999
Q ss_pred HHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhH
Q 013378 95 LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTT 169 (444)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~ 169 (444)
.+++.++++ ++.++++|+++|++. +...+...++ .|++|+++|++++++.....++|..+||.+++. .+||
T Consensus 95 ~~~~~~a~~---~~~l~~~r~l~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 95 CAATLFTTS---MTQFLIARFIQGTSI-CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred HHHHHHcCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 999999999 999999999999954 5555666777 999999999999999999999999999988875 3899
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHH
Q 013378 170 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 249 (444)
Q Consensus 170 ~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (444)
+.|++.+++.++..+..++.+||++++++++ . ......+.++..+++|.++.
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~------------------------~----~~~~~~~~~~~ll~~~~~~~ 222 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETVKRGAVP------------------------F----SAKSVLRDFRNVFRNRLFLT 222 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccCCC------------------------C----ChHHHHHHHHHHHcCHHHHH
Confidence 9999998887766665566678865321110 0 00012233455778899998
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh-hhhCchhHHHHHHHHHHHHHHH
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA-PILGEAKLLSLGLFAACINMFI 328 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 328 (444)
..+..++.......+..+.|.++++.+|.++.+.++.......+..+++.+. +++. |+.++| .......+..++..+
T Consensus 223 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~-~~~~~~~~~~~-~~~~~~~~~~ig~~l 300 (413)
T PRK15403 223 GAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIV-ARFVKDPTEPR-FIWRAVPIQLVGLAL 300 (413)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCchh-HHHHHHHHHHHHHHH
Confidence 7777777777777777788999999999999999998877777777776455 4554 444444 322222222222222
Q ss_pred hh----hccCCch--HHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 329 CS----ISWSAWV--PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 329 ~~----~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+. ...+.+. ....++.+++.+...|...+..... .+..+|++.++.+.....+..+++...|++.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 301 LIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 21 1223221 2235566778887888777544322 223479999999999999999999999988776
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1e-32 Score=260.09 Aligned_cols=365 Identities=16% Similarity=0.149 Sum_probs=257.1
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhH
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (444)
.....+...+......+..|.+.++ .+.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+..+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAE--------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 3444455555566666777777633 35566788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----h
Q 013378 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 167 (444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~ 167 (444)
++.++..++++ ++.+++.|++.|++. +...+...++ .|++|+++|++++++.+....+|..++|.+++.+ +
T Consensus 94 ~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 169 (398)
T TIGR00895 94 VFTLLCALATN---VTQLLILRFLAGLGL-GGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHccc---hHHHHHHHHHHhccc-ccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc
Confidence 99999999998 899999999999944 6677888999 9999999999999999999999999999888764 8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC--CcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc-
Q 013378 168 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR--PIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS- 244 (444)
Q Consensus 168 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (444)
||+.|++.+++..+..+.....+||+++...++++++ +..+....... +++.+. .++.+++.+..++..+.++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQ-AEAQSA-LPEQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcc-cccccc-ccccccccchhhHHHHHHhcch
Confidence 9999998876666666666677888765322211100 00000000000 000000 000001111112222223322
Q ss_pred --hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 245 --VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
+..+......++..........+.|.+. +.+|.++.+.+.......++..++. +..+++.||+++|+.........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 325 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLLGA 325 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHHHH
Confidence 3333334444455555556677788444 5569999999999999999999997 55689999999985544443333
Q ss_pred HHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 323 CINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
....++.....+.+..+. .++.+++.+...+...++..|.+|+++|+++.|+.+...++|..++|.+.|.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 326 VFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333332334443333 56678888888999999999999999999999999999999999999998875
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=253.10 Aligned_cols=345 Identities=13% Similarity=0.085 Sum_probs=258.1
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
+..+.+..++..+......+.+|.+.+ +++.++.+.|++.+.+.+++.+++++.|++.||+|||+++..+..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i~~--------~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~ 99 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQFQQ--------AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLF 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 455566667777778888888888743 336667889999999999999999999999999999999999999
Q ss_pred HhHHHHHHH---HhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 90 LSIIPLAIL---AYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 90 ~~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.+++.+++ .++++ ++.++++|+++|+ +.+...+..+.+ .|+.++++|.+.+++.+..+++|..+||.++..
T Consensus 100 ~~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~-g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 100 LYALGAALFWPAAEIMN---YTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999876 46788 9999999999999 447777888899 998888888778999999999999999877542
Q ss_pred ------------------------------hhhHHHHHHHHHH-HHHHHHHHHHhccCCCCCCCCCCCCCCccccccccc
Q 013378 166 ------------------------------LSTTSAFQAATIV-SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGV 214 (444)
Q Consensus 166 ------------------------------l~~~~~f~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 214 (444)
.+||++|+....+ .++..+......||.++++++
T Consensus 176 l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--------------- 240 (438)
T PRK10133 176 LILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--------------- 240 (438)
T ss_pred HHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc---------------
Confidence 2466666543333 222222222233432111000
Q ss_pred ccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHH-hhccCcCchhHHHHHHHHHHH
Q 013378 215 NQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFADLMLIAGLA 293 (444)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 293 (444)
+++ ..+..+..+.++++|.++...+..++..........+.+.|+ ++.+|+++.+.+..+....++
T Consensus 241 ---------~~~----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~ 307 (438)
T PRK10133 241 ---------DAK----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVC 307 (438)
T ss_pred ---------ccc----ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHH
Confidence 000 001111223356678777766666677777766777888885 567899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHH
Q 013378 294 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 373 (444)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 373 (444)
.++++ +..+++.||+++|+++..+..+..+.+++..+.++.+......+.+++.+..+|..++...+..|+ +.+++.+
T Consensus 308 ~~vG~-~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~ 385 (438)
T PRK10133 308 FFIGR-FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSS 385 (438)
T ss_pred HHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchh
Confidence 99998 666899999999999888877776666555554444333446678999999999999999998875 5678888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 374 CISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 374 ~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.. ....|+.++|.+.|.+.|..
T Consensus 386 l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 386 FIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred HHh-HHhccchHHHHHHHHHHHhc
Confidence 776 45578899999999998875
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=4.5e-31 Score=247.92 Aligned_cols=342 Identities=16% Similarity=0.121 Sum_probs=253.0
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.+...+...+....+.....+.+|.+.++. +.+..+.++..+.+.++..+++++.|+++||+|||++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADL--------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 4566677777888888889999999987554 55557889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
..+..++..++.++++ ++.+++.|+++|+ +.+...+...++ .|.+|+++|+++.++.+....+|..++|.+++.+
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGI-GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 8899999999999 446666778888 9999999999999999999999999999887763
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhc
Q 013378 167 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 242 (444)
Q Consensus 167 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (444)
+||+.|++.+.+.++..+...+.+||++++++++ ++ +..+..+..+
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------~~-------~~~~~~~~~~ 200 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-----------------------AS-------SKPRENSESL 200 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-----------------------cc-------chHHHHHHHH
Confidence 8999999988877776666666777764322110 00 0011112234
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
++++++.......+..........+.|.+.++.+|+++.+.+......++..+++. +..+++.||+++|+.+..+..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 55665554444444433334455666778888889999999998888999999997 55589999999999998888887
Q ss_pred HHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 323 CINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.++.+.+...++.+.... ..+.+.+.+...+.. ...+..|.++|+ |..+....+++.+++.+.+++.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 280 LAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777776666554432222 333334433333332 334444555443 4445556677888888888888876
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=5.1e-32 Score=257.43 Aligned_cols=365 Identities=13% Similarity=0.095 Sum_probs=246.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc-hhhHHHHHHHHhhhhcccchh
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~~ 125 (444)
+.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++.++.++. ..++.+.+.|++.|++ .+..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~-~g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF-QGMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH-hhcc
Confidence 5666788999999999999999999999999999999999999999998887765321 1167788999999994 4666
Q ss_pred hhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 013378 126 NCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 199 (444)
Q Consensus 126 ~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 199 (444)
.+..... .|++|+++|++++++.+...++|..++|.+.+. .+||+.|++.+++.++..+..++.+||++++...
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 6777788 999999999999999999999999888765443 4899999998888777666677778887643221
Q ss_pred CCCCCCcccccccccccCCCCCCCcCCccccCCchHHH-HHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCc
Q 013378 200 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 278 (444)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (444)
++.+ +. + ++..++..++ .+ ++ .+.++. .+..++++.++...+..++.....++...+.|.|+++..|+
T Consensus 216 ~~~~-~~-~---~~~~~~~~~~--~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 216 PPIE-EY-R---NDYPDDYNEK--AE---QE-LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred CCch-hc-c---cccccccccc--cc---cc-cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 1000 00 0 0000000000 00 00 011222 23467888888877777777777677888999999988899
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH---HHHHHHhhhcc--CCchHHH-HHHHHhhhhhhh
Q 013378 279 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA---CINMFICSISW--SAWVPYA-TTAFSVLVVFAT 352 (444)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~ 352 (444)
++.+.+.......+..++++ +..+++.||+++++....+.... .++.+.+...+ +.+.... .+..+.+.....
T Consensus 285 s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 363 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV 363 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH
Confidence 99999998888888888887 56689999996433222222221 12222222221 2232222 233333322222
Q ss_pred HHHHHHHhhccCCCcchhHHHHHHHHHHHHH-HHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 353 PSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
........|.+|+++||++.|+.+...++++ .++|.+.|.+.|+. +++. .+.+..+..+++.+......++
T Consensus 364 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 364 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDG-------GFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchH-------HHHHHHHHHHHHHHHHHHHHhh
Confidence 2333457789999999999999999888875 68999999999976 3322 3344444444555555444444
Q ss_pred C
Q 013378 432 P 432 (444)
Q Consensus 432 ~ 432 (444)
+
T Consensus 436 ~ 436 (438)
T TIGR00712 436 E 436 (438)
T ss_pred c
Confidence 3
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5.5e-32 Score=258.90 Aligned_cols=346 Identities=13% Similarity=0.069 Sum_probs=236.6
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+.+...+...+....+.....|.+|.+.++ ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~ 107 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDN--------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL 107 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 344445555666666666777888877644 356667889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF- 165 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~- 165 (444)
.++.+++.++++++++ ++.+++.|++.|++. +... ....+ .|++|+++|++++++.....++|..+++.+...
T Consensus 108 ~~~~~~~~~~~~~~~s---~~~l~~~r~l~G~~~-~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 108 LMLTAPAVFCMSLVSS---ATGFIAVRFFIGFSL-ATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH-HhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 899999999999955 4443 35667 999999999999999987666666665433321
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCc
Q 013378 166 ------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 233 (444)
Q Consensus 166 ------------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (444)
.+||+.|++.+++.++..+..++..++.|+.+.++ . +++. + .++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~--~-----------~~~~-----~----~~~~~ 240 (476)
T PLN00028 183 FPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE--L-----------KKSG-----T----MPKDS 240 (476)
T ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh--H-----------HhcC-----c----ccccc
Confidence 37999999999887666555554443333211000 0 0000 0 00011
Q ss_pred hHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch-
Q 013378 234 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA- 312 (444)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 312 (444)
..+.++...+++++|...+..+...........+.|.|+.+.+|++..+.+.+.+..+++..+++ +..|+++||+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r~ 319 (476)
T PLN00028 241 FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhc
Confidence 22334445667777776666555555555667788999988889999999999999999999997 6668999999765
Q ss_pred ------hHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHH
Q 013378 313 ------KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 385 (444)
Q Consensus 313 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 385 (444)
........+..+..+.+...++.+.... .++++++.+...+...++..+.. ++++|++.|+.+...++|+.+
T Consensus 320 ~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i 398 (476)
T PLN00028 320 GMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVL 398 (476)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHH
Confidence 2222333333333333333433333222 44455555555555666666654 478999999987777666666
Q ss_pred hHHHH
Q 013378 386 SPLIF 390 (444)
Q Consensus 386 ~~~~~ 390 (444)
+|.+.
T Consensus 399 ~~~l~ 403 (476)
T PLN00028 399 TQLLF 403 (476)
T ss_pred HHHHH
Confidence 66543
No 52
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-32 Score=236.97 Aligned_cols=371 Identities=15% Similarity=0.106 Sum_probs=295.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|+++.-.....+....+.+..|+-+.+. +++++|+.|.+++.++..+...+..++.|.+.||+|.|++...
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~--------~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~ 84 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIK--------SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL 84 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHH
Confidence 55666666666666666777777776663 6778999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhh----HHH
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVC----GTL 161 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~----g~~ 161 (444)
+.++..+-++..+++...+.++.+++.+.+.|+++ + .+.+.... +.++|||++|.++|+.. ..|+|..+ +|.
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G-a-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG-A-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccc-c-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 99999999999999977555679999999999933 4 44678888 99999999999999998 77777554 677
Q ss_pred hHHhhh---hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchH-HH
Q 013378 162 AARFLS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR-DL 237 (444)
Q Consensus 162 l~~~l~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (444)
+....+ ||....+..+..++..+..++...|.|+.+.+.+ +.+ +.
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~-------------------------------~~~~~~ 210 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK-------------------------------PQLPAQ 210 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc-------------------------------ccchhH
Confidence 777777 9998888888777778888888888776433210 111 33
Q ss_pred HHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHH
Q 013378 238 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (444)
++.+.++++.|.+.+.++.....+.++..++|.|++++||.++.++|.......+.+.+.+ .++|+++||+|.+|.+..
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~~ 289 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTLA 289 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHHH
Confidence 4557789999999999999999999999999999999999999999999999999999998 666999999999999998
Q ss_pred HHHHHHHHHHHhhhcc-------CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 318 GLFAACINMFICSISW-------SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 318 ~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
....++++........ +.+.... ....++..+......+.++...+| ++.|.+.|+...++.+|++.-|..
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHH
Confidence 8888888877776654 1222222 333455566666666777777776 578999999999999999999999
Q ss_pred HHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhc
Q 013378 390 FSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 428 (444)
Q Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (444)
.|..++..+++.. .+.+...+.+++....+..
T Consensus 369 ~g~~~~~tg~~~~-------~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 369 FGVSLDLTGSYTG-------AFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHhcccHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 9999998733322 4455555555556555433
No 53
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=3.4e-31 Score=248.24 Aligned_cols=369 Identities=13% Similarity=0.110 Sum_probs=251.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH-H
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML-T 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l-~ 85 (444)
+...+.+++..++..++.++..|.+|.+..+++ +.+..+.|++.+...+...+.+++.|.++||+||||.+ .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~-------~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~ 86 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEV-------HARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIV 86 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 556677888899999999999999999875543 55667889988776664454444555459999999875 5
Q ss_pred HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhh--hHHHHHHHHHHHhhhhhHHHh
Q 013378 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQR--ASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r--~~~~~~~~~~~~lg~~~g~~l 162 (444)
.+.+..+++..+.+++++ ++.+++.+.+.|... +...|...++ .|+.++++| +...++.+.+.++|.++||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i 162 (393)
T PRK15011 87 FCCLLGVLACTLFAWNRN---YFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL 162 (393)
T ss_pred HHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence 566666677778888888 777766555544424 4566778888 887776655 345578888999999999998
Q ss_pred HHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 163 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
++.+ |||..|++.++..++..+..++.+||+++++++++ ++ .+ ..+
T Consensus 163 ~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~----~~-------~~~--- 212 (393)
T PRK15011 163 AYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT----------------GT----LE-------APR--- 212 (393)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc----------------cc----cc-------ccc---
Confidence 8764 99999999988777776666677887653222100 00 00 000
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
.+++..+...............+..+.|.|+++.+|+++.+.+.+.....+..+++. +..|+++||+++|+.+..+
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~~~~ 288 (393)
T PRK15011 213 ---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLMRVA 288 (393)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHH
Confidence 011222222333333334444556789999988889999998988777666666665 6668999999999987776
Q ss_pred HHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 319 LFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.....+........++.+.... ..+.++..+...+....+..|..| +++|++.++++...++|..++|.+.|.+.|..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~ 367 (393)
T PRK15011 289 AVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW 367 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6555554444444444443333 333445555555556677788887 46999999999999999999999999999875
Q ss_pred hhcCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 398 LSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
+++. .+.+.+++.+++.+..+..+
T Consensus 368 -g~~~-------~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 368 -NYHA-------VFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred -hhHH-------HHHHHHHHHHHHHHHHHhhc
Confidence 3322 33555556666666555553
No 54
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.2e-32 Score=264.31 Aligned_cols=363 Identities=17% Similarity=0.152 Sum_probs=254.5
Q ss_pred cchhhH---HHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhc
Q 013378 44 DECSLA---IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMV 120 (444)
Q Consensus 44 ~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 120 (444)
+|++++ ..+.+++.+++.++.++++++.|+++||+|||++++.+.++.+++.++.+++++ ++.+++.|++.|++
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~~ 193 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGMG 193 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHhh
Confidence 566776 788999999999999999999999999999999999999999999999999999 99999999999995
Q ss_pred ccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013378 121 CEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 198 (444)
Q Consensus 121 ~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 198 (444)
. +...+...++ .|++|+++|+++.++.+.+..+|.+++|.++..+ +||+.|++.+++.++..+.. +++||+|++..
T Consensus 194 ~-~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~ 271 (505)
T TIGR00898 194 I-GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLS-WFVPESPRWLI 271 (505)
T ss_pred c-cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhcCCChHHHH
Confidence 4 6666789999 9999999999999999999999999999988765 79999999988866555444 67999987543
Q ss_pred CCCCCCCccccc---ccccccCCCCC------CCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHH
Q 013378 199 DDDLTRPIITEE---TEGVNQNESNS------PVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFL 269 (444)
Q Consensus 199 ~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (444)
.+++.++..+.. .+.+......+ +.++...+++.+ .+.++++|.++...+......+.........+
T Consensus 272 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (505)
T TIGR00898 272 SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYS----FLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLV 347 (505)
T ss_pred HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCc----HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332222111111 00000000000 000000011112 33466777777666555544444333333333
Q ss_pred HHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCC--chHHH-HHHHHh
Q 013378 270 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVPYA-TTAFSV 346 (444)
Q Consensus 270 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~g~ 346 (444)
.+. +.++.+.. ......++..+++. +..+++.||+|||+.+..+.++.+++.+.+.+.++. +.... .++.++
T Consensus 348 ~~~-~~~~~~~~---~~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 422 (505)
T TIGR00898 348 LDL-GNLGGNIY---LDLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKF 422 (505)
T ss_pred ccc-cccCCChH---HHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Confidence 333 33355433 22334456666665 556899999999999999888888887777766543 32323 344456
Q ss_pred hhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHH
Q 013378 347 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
+.+..++..+.+..|.+|++.|+++.|+.+....+|++++|.+.+ +.+. +.. ..+.+.+++.+++.+...
T Consensus 423 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--~~~-------~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 423 GITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK--WLF-------LPLVLFGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--HHh-------hHHHHHHHHHHHHHHHHH
Confidence 666778888899999999999999999999999999999999988 4332 211 134555555555555555
Q ss_pred hccc
Q 013378 427 MMSH 430 (444)
Q Consensus 427 ~~~~ 430 (444)
.+++
T Consensus 493 ~lpe 496 (505)
T TIGR00898 493 FLPE 496 (505)
T ss_pred cCcC
Confidence 5543
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=5.4e-31 Score=245.95 Aligned_cols=360 Identities=12% Similarity=-0.005 Sum_probs=271.8
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH----H
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML----T 85 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l----~ 85 (444)
...+....+....+.++..|.+|.+.++. +.+..+.|++.+++.+...++++++|+++||+|||+.. .
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~--------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 77 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGI--------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLA 77 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34466777888888999999999998554 56668999999999999999999999999999985433 2
Q ss_pred HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
.+..+..+ ..+..+++ ++.+++.|+++|.+. +...|...++ .++ +++|++.++......++|.++||.+++
T Consensus 78 ~~~~l~~~--~~~~~~~~---~~~l~~~~~l~~~~~-~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g 149 (382)
T TIGR00902 78 LASAIFAA--AFSAGAHN---AWLLFIAIGLFALFF-SAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFG 149 (382)
T ss_pred HHHHHHHH--HHHHhhhh---HHHHHHHHHHHHHHH-ccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHH
Confidence 22222222 23446777 899999999999855 4456778888 664 578899999999999999999998877
Q ss_pred hh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHH
Q 013378 165 FL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 240 (444)
Q Consensus 165 ~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (444)
.+ |||..|++..... +..+.. +.++|++++++++ + + +..+ ..+ ..+.
T Consensus 150 ~l~~~~g~~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~---------------------~-~~~~---~~~-~~~~ 200 (382)
T TIGR00902 150 GLIGMFDEQNILAILTAGL-AFMLIG-FLIKPTIPPKDAI-P---------------------E-DESQ---GDS-AFIA 200 (382)
T ss_pred HHHHHcChhHHHHHHHHHH-HHHHHH-HHcCCCCCCCccc-c---------------------c-cccc---cch-hHHH
Confidence 64 8999998876542 222222 3344432111110 0 0 0000 011 1233
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
++|+|+++...+..++..........+.|.|+++ .|.++.+.|.++....+..++.. ...+++.||+++|+.+..+.+
T Consensus 201 ~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 201 LLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHH
Confidence 6788999988888888888888889999999987 69999999999988777777775 666899999999999999999
Q ss_pred HHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHH-HHHHHHHHhHHHHHHHHHhhh
Q 013378 321 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLTALFL 398 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~ 398 (444)
...+....+.+.++.+..+. ..+.++..+...+....++++. |++++++.+++++. ...+|..++|.++|.++|+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~- 356 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL- 356 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999988888888776665 6777999999999999999988 99999999999874 56799999999999999986
Q ss_pred hcCCCcccchhHHHHHHHHHHHHHHHHH
Q 013378 399 SKGAPFNFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
+. ..+...+++.+++.+...
T Consensus 357 g~--------~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 357 GA--------GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred cH--------HHHHHHHHHHHHHHHHHH
Confidence 22 134556566666555443
No 56
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=3.4e-30 Score=242.71 Aligned_cols=339 Identities=15% Similarity=0.079 Sum_probs=251.2
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
+..+.+..++..++.+++.|.+|.+.++. +.+..+.|++.+++.++..++++++|+++||+|||+++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 79 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADL--------QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLS 79 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHH--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHH
Confidence 33444445666777888889988876443 5666889999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh---
Q 013378 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF--- 165 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~--- 165 (444)
+..++.+++.++++ ++.+++.|+++|++. +...+...++ .|++|++++++..+.......+|..++|.+++.
T Consensus 80 ~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 80 LFALGSLGMLWVES---AAQLLVLRFVQAVGV-CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHHHHHHHHHhcC---HHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 999999999999954 5555667788 999999999999999888888888888888776
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 166 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 166 -l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
.+||+.|++.+++.++..+.. +.++|++++++++ +.++.++...++
T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~ 202 (401)
T PRK11043 156 HFGWQAIFATLFAITLLLILPT-LRLKPSKKARKQS--------------------------------QDALTFKQLLKS 202 (401)
T ss_pred cCChHHHHHHHHHHHHHHHHHH-HHcCCCCCccccc--------------------------------hHHHHHHHHHcC
Confidence 489999998887766554444 3455443211100 001223335566
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
|+++...+..............+.|.+.++ .|+++.+.+.......++..+++ +..+++.||+++|+..........+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~~ 280 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFAV 280 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 776655555444455555667778888866 59999999988777777777776 5558999999988866555444443
Q ss_pred HHHH---hhh--ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 325 NMFI---CSI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 325 ~~~~---~~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+.+. ... .++.+.... ..+.+++.+..+|...+...+..| +++|++.|+.+..+..+...++.+.|.+.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 281 SVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 3322 222 122222222 455677788888888888777776 6799999999999999999999999888763
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.6e-31 Score=254.67 Aligned_cols=366 Identities=14% Similarity=0.158 Sum_probs=252.9
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+.+..+++..+++.++.....+.+|.+.++ ++.+..+.+++.+.+.++..++.++.|+++||+|||+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 91 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGE--------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 455677778888888999989989887644 356667889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
.++.+++.++++++++ ++.+++.|++.|++. +...+....+ .|.+|+++|++++++.....++|..++|.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 92 IVLFSVGTLACGFAPG---YWTLFIARLVIGMGM-AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999944 6666778888 9999999999999999999999999999887764
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCch--------
Q 013378 167 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI-------- 234 (444)
Q Consensus 167 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 234 (444)
+||+.|++..+.. +..+......||++++++++++.++. ++..+.. .+..++.....
T Consensus 168 ~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 236 (496)
T PRK03893 168 VPVWGWRALFFIGILPI-IFALWLRKNLPEAEDWKEKHAGKAPV-RTMVDIL---------YRGEHRIINILLTLAAAAA 236 (496)
T ss_pred hccCCHHHHHHHHHHHH-HHHHHHHHhCCCchhhhhhccccccc-hhHHHHH---------hcchhHHHHHHHHHHHHHH
Confidence 8999998755443 33333344556654322111000000 0000000 00000000000
Q ss_pred -HHHHH-------------------------H-h-ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHH
Q 013378 235 -RDLIC-------------------------L-L-RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADL 286 (444)
Q Consensus 235 -~~~~~-------------------------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 286 (444)
..... . . .+.+.........+...........++|.|+++.+|++..+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~ 316 (496)
T PRK03893 237 LWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANV 316 (496)
T ss_pred HHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHH
Confidence 00000 0 0 000111111111111111112346789999987789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCc--hHHH-HHHHHhhhhhhhHHHHHHHhhcc
Q 013378 287 MLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW--VPYA-TTAFSVLVVFATPSFRSIVSKQV 363 (444)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~g~~~~~~~~~~~~~~~~~~ 363 (444)
.+...++..++. +..+++.||+++|+.+..+..+..+..+......+.. .... .++.+.......+...+++.|.+
T Consensus 317 ~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (496)
T PRK03893 317 LFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF 395 (496)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC
Confidence 999999999987 5668999999999988877666555544333332222 2212 22222222334566677889999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 364 GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 364 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
|+++||+++|+.+....+|+.++|.+.|.+.|..
T Consensus 396 ~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 396 DTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999875
No 58
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=4.4e-31 Score=250.03 Aligned_cols=358 Identities=11% Similarity=0.023 Sum_probs=243.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.++.+.+..++..++.+...|.+|.+.+++ .+.+..+.|++.+++.++..+++++.|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDI-------NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 56777778888888998999999999998664 36667889999999999999999999999999999999988
Q ss_pred HHHHhHHHHHHHH---hccCc--hhhHHHHHHHHhhhhcccchhhhhhhhhhccCChhhhhHHHHHHHHHHHhhhhhHHH
Q 013378 87 PLTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYADNISERQRASAFGILLGVLSASFVCGTL 161 (444)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 161 (444)
+..+.+++..... .++.. ......++.++..|.+. ....+....+.+.. ++++++.++......++|..++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~ 159 (420)
T PRK09528 82 IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGF-LAGAGAIEAYIERV-SRRSGFEYGRARMWGSLGWALCAF 159 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-ccchhhhhhHHHHH-HhhccccchhhHHhhhHHHHHHHH
Confidence 7666554433221 11110 00112233344344311 12222222221111 345677888888888999999999
Q ss_pred hHHhh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 162 AARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 162 l~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
+++.+ +|+.+|++.+++.++..+..++..||++++.+.+ ++ +. ++ +++.+.++ .
T Consensus 160 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~---~~---~~~~~~~~-~ 216 (420)
T PRK09528 160 IAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-NA---------------LG---AN---ASAVSLKD-A 216 (420)
T ss_pred HHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-cc---------------hh---cc---cccccHHH-H
Confidence 98875 7899999888776655555444444432211110 00 00 00 01112233 2
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhcc---CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
+..+++|.++...+..+...........+.|.|+.+.+ +.+..+.|.+.+...+...++. +..+++.||+++|+.+
T Consensus 217 ~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 217 LALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchhh
Confidence 33556777666555544444444444556677765443 5566677888888888888886 6668999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHH-HHHHHHHHHHHhHHHHHHH
Q 013378 316 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l 393 (444)
..+..+..++..++.+.++++..+. ..+.+++.+...+....+..+..|++.+++..+. .+....+|.+++|.+.|++
T Consensus 296 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l 375 (420)
T PRK09528 296 LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNL 375 (420)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888877777765554 4555666666667777888999999999988766 6778899999999999999
Q ss_pred HHhh
Q 013378 394 TALF 397 (444)
Q Consensus 394 ~~~~ 397 (444)
.|..
T Consensus 376 ~~~~ 379 (420)
T PRK09528 376 YDSI 379 (420)
T ss_pred HHhh
Confidence 9976
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.4e-31 Score=254.74 Aligned_cols=346 Identities=11% Similarity=0.047 Sum_probs=245.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHH-HHHhhhhccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCE 122 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~ 122 (444)
++++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++ ++.+++ .|+++|++.
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~G~~~- 122 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---VIELYLTAGFITGLGL- 122 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcc-
Confidence 444666788899999999999999999999999999999999999999999999999988 777765 579999954
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 197 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 197 (444)
+...+...++ .++++ ++|+++.++.+.+..+|..++|.+++. .+||++|++.+++.++..+..++..|+.+.++
T Consensus 123 ~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~ 201 (455)
T TIGR00892 123 AFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR 201 (455)
T ss_pred hhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 5444556677 88885 789999999999999999998887765 48999999998876655444444333322111
Q ss_pred CCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccC
Q 013378 198 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 277 (444)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 277 (444)
..++++++ .. +.....++ .. .+...++..+..+ + ..+++|.++......++..........++|.|.++ .|
T Consensus 202 ~~~~~~~~--~~--~~~~~~~~-~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g 272 (455)
T TIGR00892 202 VSKSKSKE--GL--PPDGSTKK-LS-KKSTAEKINRFLD-F-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KG 272 (455)
T ss_pred cccccccc--cC--CCCCcccc-cc-ccchhhhhhhhcc-h-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cC
Confidence 10000000 00 00000000 00 0000000001100 1 25577888887777777777777778889999877 59
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CchhHHHH--HHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhh
Q 013378 278 FNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLLSL--GLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 352 (444)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 352 (444)
++..+.+...+..+++.++++ ...+++.||. ++++.... +.....++.++....++.+..+. .++.|++.+...
T Consensus 273 ~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 273 VDEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 999999999999999988887 4557999873 33433322 33333444444445555554444 566788888888
Q ss_pred HHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCc
Q 013378 353 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 404 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 404 (444)
+...+.+.|.+|+++++++.|+.+...++|+++||.+.|.+.|..+++...+
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f 403 (455)
T TIGR00892 352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403 (455)
T ss_pred HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHH
Confidence 8999999999999999999999999999999999999999999764455544
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=2.5e-30 Score=242.25 Aligned_cols=344 Identities=15% Similarity=0.111 Sum_probs=261.2
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
.+..+....+...+..++..|.+|.+.++ ++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~--------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~ 75 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQA--------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL 75 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 34556667777888888999999988643 3666788999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhc---cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 89 TLSIIPLAILAYR---RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 89 ~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
++.+++.+++..+ ++ ++.+++.|++.|+| .+...+..+.+ .+..|+++|++.+++.+...++|..+||.++.
T Consensus 76 ~l~~~g~~l~~~~~~~~~---~~~~l~~~~l~G~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 76 FLYALGAFLFWPAAEIMN---YTLFLVGLFILTAG-LGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHhh-HHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998886543 46 89999999999994 47777788888 99999999999999999999999999988766
Q ss_pred hh------------------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccccccc
Q 013378 165 FL------------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGV 214 (444)
Q Consensus 165 ~l------------------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 214 (444)
.+ +||++|++.+++.++..+... ..|+++.+++++
T Consensus 152 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~-------------- 216 (410)
T TIGR00885 152 QLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA-------------- 216 (410)
T ss_pred HHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc--------------
Confidence 43 499999988877655443332 222221111000
Q ss_pred ccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhcc-CcCchhHHHHHHHHHHH
Q 013378 215 NQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAGLA 293 (444)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 293 (444)
++ .+.++..+.++++|+++...+..+++........++++.|.++.. +.+....+...+.....
T Consensus 217 ---------~~------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~ 281 (410)
T TIGR00885 217 ---------KQ------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVI 281 (410)
T ss_pred ---------cc------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 00 011111223567788888777788877777777888999987642 33434444455555566
Q ss_pred HHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHH
Q 013378 294 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 373 (444)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 373 (444)
..+++ ++++++.||+++|+.+.+......+..++....++....+...+.+++.+..+|..++...+..+++.+....+
T Consensus 282 ~~vGR-~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 282 FFISR-FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred HHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 77777 66689999999999988888888888777777666555555777889999999999999999999766544555
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 374 CISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 374 ~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.... +|+.+.|.+.|.+.|..
T Consensus 361 l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 361 LVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHH--hccchHHHHHHHHHHHh
Confidence 44443 99999999999999964
No 61
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=5.8e-32 Score=259.47 Aligned_cols=361 Identities=12% Similarity=0.052 Sum_probs=252.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc--cCchhhHHHHHHHHhhhhccc
Q 013378 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCE 122 (444)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~ 122 (444)
|++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.++ .+ ++.+++.|+++|+ +.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~ 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGL-AQ 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHH-hc
Confidence 678888999999999999999999999999999999999999999999988887554 45 7889999999999 55
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPN 196 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 196 (444)
+...+....+ .|++|+++|++++++...+.++|..++|.+++.+ +||++|++.+++.++..+..+...||+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 7777888899 9999999999999999999999999999887653 899999999888766666666666666543
Q ss_pred CCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhcc
Q 013378 197 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 276 (444)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (444)
+++.+++++ +...+.. +++ + ...+.+.+ ++..++++.++...+..+........+..++|.|+++.+
T Consensus 226 ~~~~~~~~~--~~i~~~~--~~~----~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~ 292 (465)
T TIGR00894 226 HPCISKFEK--KYINSSL--QGQ----K-GSTRQSLP----IKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVL 292 (465)
T ss_pred CCCCCHHHH--HHHHhhc--ccc----c-CCCCCCCC----HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322111100 0000000 000 0 00011112 334678889999888888888888888899999999999
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH--------HHHHHHHH--HHHHHHhhh-ccCCchHHH-HHHH
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL--------LSLGLFAA--CINMFICSI-SWSAWVPYA-TTAF 344 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~--~~~~~~~~~-~~~~~~~~~-~~~~ 344 (444)
|.+..+.++..+...++..++. +..|+++||.++|+. +..+.... .+..+.... ..+.+..+. ..+.
T Consensus 293 g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (465)
T TIGR00894 293 RVSGKENGLLSSLPYLFAWLCS-IFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLA 371 (465)
T ss_pred CcChHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 9999999999988889888887 566899998754321 11111111 111111222 122222222 2333
Q ss_pred HhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHH
Q 013378 345 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 424 (444)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (444)
+.+.+...+.......+..| +.+|.+.|+.+..+.+++.++|.+.|.+.+.. +. . .....+.+.++..+++.+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~-~~-~---~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 372 NAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQD-SK-N---VWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCC-Cc-h---HHHHHHHHHHHHHHHHHHH
Confidence 34444445555555667666 58999999999999999999999999887642 10 0 1122445555556665555
Q ss_pred HHhcc
Q 013378 425 SLMMS 429 (444)
Q Consensus 425 ~~~~~ 429 (444)
.....
T Consensus 446 ~~~~~ 450 (465)
T TIGR00894 446 YLIFG 450 (465)
T ss_pred eeeee
Confidence 44433
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1.5e-30 Score=240.90 Aligned_cols=340 Identities=22% Similarity=0.320 Sum_probs=284.2
Q ss_pred HHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHh
Q 013378 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (444)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (444)
.+....+...++.....+..|.+.++. +.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~ 74 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL--------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHH
Confidence 455667788888899999999987554 445578899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----
Q 013378 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 166 (444)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l---- 166 (444)
.++.....+.++ ++.+++.|++.|+ +.+...+...++ .|+.|+|+|++.+++.+...++|..++|.+++.+
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 75 ALGSLLLAFASS---LWLLLVGRFLLGL-GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHc-ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 9999999999999 447777888999 9999999999999999999999999999888774
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchh
Q 013378 167 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 246 (444)
Q Consensus 167 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (444)
+||+.+++.+++.++..+...+ .+ |.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------~~ 176 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLF-LL-----------------------------------------------------RL 176 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH-----------------------------------------------------HH
Confidence 6999999888776655544433 33 23
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh-HHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-LLSLGLFAACIN 325 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 325 (444)
++...+..+...........+.|.+.++.+|.+..+.+.......++..++. ...+++.||+++|+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3445666667777777888899999988889999999999999999999997 55589999999999 898999988888
Q ss_pred HHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCc
Q 013378 326 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 404 (444)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 404 (444)
.+.+...++.+.... ..+.+++.+...+...++..|..|+++|++..|+.+...+++..++|.+.|.+.+.. +++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~-- 332 (352)
T cd06174 256 LLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGG-- 332 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-Ccch--
Confidence 888887776555544 667788899999999999999999999999999999999999999999999999754 3332
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 013378 405 NFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
.+.+.+++.+++.+...
T Consensus 333 -----~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 333 -----VFLILAALALLAALLLL 349 (352)
T ss_pred -----HHHHHHHHHHHHHHHhe
Confidence 34555555555555443
No 63
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=2e-30 Score=242.44 Aligned_cols=328 Identities=13% Similarity=0.143 Sum_probs=241.8
Q ss_pred HHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHh
Q 013378 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (444)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (444)
.++.++..|.+|.+.++. +.+..+.+++.+++.++..++.++.|+++||+|||+++..+..+.+++...+.+
T Consensus 4 ~~~~~~~~p~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAADF--------GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred chHHHHHhccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 456778889999998554 566688899999999999999999999999999999999999999999999999
Q ss_pred ccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHH
Q 013378 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAA 175 (444)
Q Consensus 101 ~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~ 175 (444)
+++ ++.+++.|++.|++. +...+...++ .|++|+++|++++++.+....+|..++|.+++.+ +||+.|++.
T Consensus 76 ~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 76 AQT---IDQLIYMRFLHGLAA-AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred Hcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 999 899999999999944 6666778889 9999999999999999999999999999887763 899999988
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHH
Q 013378 176 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 255 (444)
Q Consensus 176 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (444)
+.+.++..+...+..||++++++++ +.+ .+ +..+.++..+++|+++...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ-----------------------PFH---LR-TTIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC-----------------------CCC---hH-HHHHHHHHHHcChHHHHHHHHHH
Confidence 8877666666666777754322110 000 00 11122334566777776666655
Q ss_pred HHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh---hhc
Q 013378 256 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC---SIS 332 (444)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 332 (444)
+..........+.|.+..+.+|+++.+.+.......+..++++ +..+++.||+++|+.+..+..+..+..+.+ ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566667778878789999999999999999988887 556899999999998887776543332222 112
Q ss_pred c-CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHH-HHHHHhHHH
Q 013378 333 W-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS-FANIVSPLI 389 (444)
Q Consensus 333 ~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~~~~~ 389 (444)
+ +.+.... ..+.+.+.+...+.......|..| +++|++.++.+.... ++..+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 284 DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2222222 223334444445555666777666 889999998876643 444444443
No 64
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=3.4e-30 Score=238.63 Aligned_cols=364 Identities=14% Similarity=0.097 Sum_probs=260.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|++....+..++......+..|+.+.+.+ .++++|..+.+++.+++.+++.++.++.|++.||+|.|+++..
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~-------~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNK-------IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 366777777777777778888887776642 3457888899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhc-----cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH-
Q 013378 87 PLTLSIIPLAILAYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG- 159 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g- 159 (444)
+.++.++.++..+++ ++ ++.+++.|++.|+ + +..++..... ++++|+++||+++|+.....++|..++
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gi-g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGF-A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHH-H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 999999999999987 67 9999999999999 4 4466778888 999999999999999976666666544
Q ss_pred ---HHhHH------------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCC
Q 013378 160 ---TLAAR------------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 218 (444)
Q Consensus 160 ---~~l~~------------------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (444)
|.+.. ..+||..+++..++.++..++.++..+|.++. +.
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~~------------------- 240 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-RA------------------- 240 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-cc-------------------
Confidence 43221 22477777777777666666666655543321 11
Q ss_pred CCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHH
Q 013378 219 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 298 (444)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 298 (444)
+.++.. ..+|+|+.|...+..++....+.++..++|.|.++.+ +............+...+.+
T Consensus 241 --------------~~~~~~-~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r 303 (462)
T PRK15034 241 --------------SIADQL-PVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR 303 (462)
T ss_pred --------------CHHHHH-HHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH
Confidence 223322 3678899999899988888888888889999998865 33332333344456666776
Q ss_pred HHHHHHHhhhhCchhHHHHHHHHHHHHHHHh-hhcc-----CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCC------
Q 013378 299 LLFMPLLAPILGEAKLLSLGLFAACINMFIC-SISW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP------ 365 (444)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~------ 365 (444)
.++|+++||+|+++++..+.+...++.... ...+ +.+.... .+.+.++.+..+...+.++.+.+|+
T Consensus 304 -plgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~ 382 (462)
T PRK15034 304 -SVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRV 382 (462)
T ss_pred -HhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcc
Confidence 566999999999999988887666654322 2222 1222222 2222344455555566666666653
Q ss_pred ---------------CcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHh
Q 013378 366 ---------------NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 427 (444)
Q Consensus 366 ---------------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (444)
++.|.+.|+....+.+|+++-|.+.|...+..+++.. .+....+..+++....+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~-------~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 383 KMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVG-------AMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred cccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHH-------HHHHHHHHHHHHHHHHHH
Confidence 1568999999999999999999999999988744333 335555555555555543
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=1.5e-29 Score=242.42 Aligned_cols=375 Identities=12% Similarity=0.069 Sum_probs=261.4
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-----CchH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA 82 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~ 82 (444)
|....++...+..++......+.+|.+.++. +.+..+.|.+ +...... ++.+++|+++||+ ||||
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~--------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMTVE--------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 3455666677788888999999999998654 4444566665 3334443 5889999999999 9988
Q ss_pred H-HHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHH
Q 013378 83 M-LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGT 160 (444)
Q Consensus 83 ~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~ 160 (444)
. +..+.+..+++...+++.+....++.+.+.+++.|++. +...+...++ .|++|+|||+++.++...+..+|.++++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~-a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCS-ASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH
Confidence 5 66777778788877777643333888999999999955 6677788899 9999999999999999999999999988
Q ss_pred HhHHh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchH
Q 013378 161 LAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 235 (444)
Q Consensus 161 ~l~~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (444)
.++.. .|||..|++.+++.++..+.. +..||++++++++ ++ .++ +..
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~~-----------------------~~-~~~---~~~ 212 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPVP-----------------------KT-LEQ---AVV 212 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCccccccc-----------------------cc-hhh---hHH
Confidence 66543 489999999887765554433 4477754321100 00 000 111
Q ss_pred HHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHH-HHHHHHHHHHHHHHHhhhhCchhH
Q 013378 236 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA-GLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
+.++.+++++..+......++..........+.+.|+.+..|++..+.+...... .++.+++. +..|++.||+++|+.
T Consensus 213 ~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 213 APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHH
Confidence 2233345566666655555666666656677788888777899999999987544 45666775 777999999999887
Q ss_pred HHHHHHHHHHHHHH---hhhcc-CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 315 LSLGLFAACINMFI---CSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 315 ~~~~~~~~~~~~~~---~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
+..+..+..+..+. +.... +.+.... .++..+..+...+...++..+..+++.+++..|+.+....+|..+++.+
T Consensus 292 l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 292 LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 76655544443322 22222 2222222 3333444555567778888899999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 390 FSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
.|.+.|.. ++. ..|.+.+++.+.+.+.....++
T Consensus 372 ~G~l~~~~-G~~-------~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 372 AGWFVEAH-GWP-------TFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHh-ChH-------HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999976 332 2456666666666666655543
No 66
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-30 Score=234.71 Aligned_cols=380 Identities=17% Similarity=0.151 Sum_probs=269.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (444)
++.+.+ ..-+.+.+++.+|.+++++..|.++||+|||..+.++.++..++.+++.++...+.+++++++|++.|+ ..|
T Consensus 54 s~~~~~-~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl-~~g 131 (485)
T KOG0569|consen 54 SDSTLD-LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGL-ACG 131 (485)
T ss_pred ChHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HhH
Confidence 443444 456888999999999999999999999999999999999988888888776544449999999999999 557
Q ss_pred hhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013378 124 SINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 196 (444)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 196 (444)
........+ .|..|++.||..-...+.+..+|.++|..++.- -.|++.+....+++++. +....++||+|++
T Consensus 132 l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 132 LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPKY 210 (485)
T ss_pred HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcch
Confidence 777778888 999999999999999999999999999655432 36888888888876544 4556779999986
Q ss_pred CCC----CCCCCCcccccccccccCCCC------CCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhH
Q 013378 197 DDD----DDLTRPIITEETEGVNQNESN------SPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQA 266 (444)
Q Consensus 197 ~~~----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (444)
.-. ++++++..+..+.+.+.+++. .+.++..+++..++++.++.-..++.+...+...+...+.......
T Consensus 211 Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~ 290 (485)
T KOG0569|consen 211 LLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIF 290 (485)
T ss_pred HHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeH
Confidence 332 222333333322221111110 0011111123335555433222223333334444444444433333
Q ss_pred HHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc-----C-CchHHH
Q 013378 267 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-----S-AWVPYA 340 (444)
Q Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ 340 (444)
++...+-+..|++..++-+.....++...+.+ +.+.++.||.|||++++.+..++.+..+++.... . .|..+.
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34444444459999999999999999999997 6668999999999999999998888777665432 1 333322
Q ss_pred ----HHHHHhhhh-hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHH
Q 013378 341 ----TTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIG 415 (444)
Q Consensus 341 ----~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (444)
.+++.+..+ +..|..+-+.+|.+|++.|..+++....+.++..++-...+..+.+..++ ..++...
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---------~~filF~ 440 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---------YVFILFV 440 (485)
T ss_pred HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------hhhHHHH
Confidence 222333333 45788999999999999999999999999999999999998888887622 2667777
Q ss_pred HHHHHHHHHHHhcccCCCCCc
Q 013378 416 LASMVAFIQSLMMSHTPASSK 436 (444)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~ 436 (444)
+.+.+..++.++..||+|.++
T Consensus 441 i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHHHhCcccCCCC
Confidence 777777888888888776544
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=8.3e-30 Score=239.84 Aligned_cols=350 Identities=13% Similarity=0.062 Sum_probs=242.8
Q ss_pred HHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHH
Q 013378 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (444)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (444)
+++.++.....+..+.+.++...+ .++...+........+...++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPP-SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 345566666666666666554321 2222222222223344555666789999999999999999999999999999999
Q ss_pred HHhccCchh-----hHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh------
Q 013378 98 LAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF------ 165 (444)
Q Consensus 98 ~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~------ 165 (444)
++++++... .+.+++.|+++|++. +...+....+ .|+.|+++|++..++.+.+..+|..+++.++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSL-GGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhc-cccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999988321 125889999999944 6666788899 999999999999999999999999999876532
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 166 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 166 ------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
.+||++|++.+++.++. .......||++++++++++ .++.+.+.++.++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 215 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFEKAQEK------------------------HKKKRGPIRETLT 215 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHHHHhc------------------------cccccCCHHHHHH
Confidence 47999998877665433 3334456665433221100 0001112233221
Q ss_pred HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 240 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
.+++.++......++..........+.|.|.++.+|.++.+.+.......+...++. ...+++.||+++|+.+....
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~ 292 (394)
T TIGR00883 216 --KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLIIFT 292 (394)
T ss_pred --hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHH
Confidence 111235555666666666666778889999988889999999998888888888887 55589999999998776544
Q ss_pred HHHHH-HHH-Hhhhc--cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHH-HHHHHHHHHHhHHHHHHH
Q 013378 320 FAACI-NMF-ICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFSPL 393 (444)
Q Consensus 320 ~~~~~-~~~-~~~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l 393 (444)
.+..+ +.. ..... ++.+.... ..+.+++.+...+..++...|.+|+++|+++.++. +....+|..++|.+.|.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l 372 (394)
T TIGR00883 293 VLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAAL 372 (394)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHH
Confidence 43332 212 22222 23333333 45557777778888999999999999999999985 455678888999999999
Q ss_pred HHhh
Q 013378 394 TALF 397 (444)
Q Consensus 394 ~~~~ 397 (444)
.|+.
T Consensus 373 ~~~~ 376 (394)
T TIGR00883 373 VAMT 376 (394)
T ss_pred HHHc
Confidence 9986
No 68
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.4e-30 Score=270.77 Aligned_cols=358 Identities=11% Similarity=0.066 Sum_probs=261.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.+..++...++..++.++....++.+....+ ..+....+..+.++..+++.++++++++++|+++||+|||+++..
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGL--SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 445666777778877776655444333322211 111111223567889999999999999999999999999997643
Q ss_pred ---HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHh
Q 013378 87 ---PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
..+...+..+.....++ ++.++++|+++|+ +.+...|+..++ .|++++++|++++++.+++.++|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi-~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 88 LKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGI-HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22222232333334477 9999999999999 547788899999 999999999999999999999999999999
Q ss_pred HHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 163 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
++++ +|++.|....+.. +..++..+.+|++++.+... +..........+.+
T Consensus 164 ~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~ 218 (1140)
T PRK06814 164 GGLATISGNFVILVALLMGIA-VLGWLASLFIPKTGNAAPDL------------------------KIDRNIIRSTITLL 218 (1140)
T ss_pred HHHHHhccccHHHHHHHHHHH-HHHHHHHhhCCCCCCCCCCC------------------------eeccchHHHHHHHH
Confidence 9885 7888885444443 44444555677654322110 00000011234556
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
+.+++++.++...+..++.++.......++|.|+++.+|.++...|++.+..+++.++++ +..+++.|+..+++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 219 KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHH
Confidence 778889999998888888877777888899999999999999999999999999999997 5558999877766655555
Q ss_pred HHHHHHHHHHhhhc--------------------cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHH
Q 013378 319 LFAACINMFICSIS--------------------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 377 (444)
Q Consensus 319 ~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 377 (444)
.++..++.+.+.+. .+.|..++ .+++|++.+...+...+++++.+|++.+|+++|+.++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~ 377 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNV 377 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHH
Confidence 44444444333332 33444444 5667888888888899999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHh
Q 013378 378 ISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 378 ~~~~g~~~~~~~~g~l~~~ 396 (444)
...++..+++.+.|.+.+.
T Consensus 378 ~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998754
No 69
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=4.6e-31 Score=227.80 Aligned_cols=343 Identities=18% Similarity=0.297 Sum_probs=246.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhh
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (444)
+.+....|++.+.+.+.+++.++.+|.++||+|||++++++.+..++...+.+.+.| +..+.++|++.|+ ..|...
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---F~afv~aR~l~Gi-~kgnl~ 139 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---FAAFVLARFLGGI-FKGNLS 139 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhh-ccCchH
Confidence 456688999999999999999999999999999999999999999999999999999 8667777999999 657774
Q ss_pred hhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhh------HHHHHH----HHHHHHHHHHHHHHhccCCCC
Q 013378 127 CLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFLST------TSAFQA----ATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 127 ~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~------~~~f~~----~~~~~~~~~~~~~~~~~e~~~ 195 (444)
...++ +|++++|+|+++++.++..+++|.++||.+|+++.- +.+|.. ..+++..-.....+++||+-+
T Consensus 140 -v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 140 -VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred -HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 68899 999999999999999999999999999999999743 233333 222222223345567999976
Q ss_pred CCCCCCCCCCcccccccccccCCCCCCC-cCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhh
Q 013378 196 NDDDDDLTRPIITEETEGVNQNESNSPV-KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA 274 (444)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (444)
.++++|+.+...+...++ .+....+.. +...-+. .+.++ .-..+....+-.+.+...+.......+.+..+
T Consensus 219 ~rk~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~lrn-~p~~~------~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~ 290 (451)
T KOG2615|consen 219 LRKRNDEHSTLQEAADDR-LALLKFARIFKVAALRN-PPLLD------FISVLRIFGLHYFLYLELFSGLENTVLFLTHG 290 (451)
T ss_pred chhhcccccchhhhhhhh-hhhcchhhhhhhhhhcC-ccccc------hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcC
Confidence 655542222111111111 000000000 0000000 00011 00122334455556666666666666667678
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC--chhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhh
Q 013378 275 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFA 351 (444)
Q Consensus 275 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 351 (444)
.+|+++.+.|.+++..++.+.+.+..+. +..+|.+ .+-.+..+..++.-..+++.....+..++. ..+..+.....
T Consensus 291 rfg~ss~~~G~vl~~tGl~m~~~ql~~~-~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 291 RFGYSSMQQGKVLSTTGLLMLVIQLALV-PILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred ccCCChhhheeeeehhhHHHHHHHHhcc-ccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 8999999999999999999999986664 5555544 444555666666666666666666666665 56667778888
Q ss_pred hHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCC
Q 013378 352 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 403 (444)
Q Consensus 352 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 403 (444)
.+....++.+..|+++||++.|+..+...++.++||.+.|.+..+..+.+..
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a 421 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPA 421 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCce
Confidence 8999999999999999999999999999999999999999998886444433
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=3.3e-30 Score=238.74 Aligned_cols=331 Identities=13% Similarity=0.048 Sum_probs=246.9
Q ss_pred HHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc
Q 013378 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (444)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~ 101 (444)
.+.....|.+|.+.++. +.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++..++.+.+ .+
T Consensus 14 ~~~~~~~~~lp~l~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~ 84 (355)
T TIGR00896 14 PALTSVGPLLPQIRSAL--------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA 84 (355)
T ss_pred CccccCcccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence 33456678899887443 6667889999999999999999999999999999999999998888888777 67
Q ss_pred cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh------hhHHHHHH
Q 013378 102 RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQA 174 (444)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l------~~~~~f~~ 174 (444)
++ .+.+++.|++.|++. +...+....+ .|+.| ++|++++++.+...++|..+++.+++.+ +||+.|..
T Consensus 85 ~~---~~~l~~~~~~~g~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~ 159 (355)
T TIGR00896 85 PG---TALLFAGTALIGVGI-AIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAW 159 (355)
T ss_pred cc---HHHHHHHHHHHHHHH-HHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 77 888999999999954 6655667777 88876 6899999999999999999888776653 38888877
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHH
Q 013378 175 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 254 (444)
Q Consensus 175 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (444)
.+...++.. ...+||.+++++++ ++.. +...++ .+++|.++...+..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~~-----------------------~~~~---~~~~~~----~~~~~~~~~~~~~~ 206 (355)
T TIGR00896 160 WALPALLAL---LAWIPQVRRRVAAN-----------------------QTTT---RLTPVR----IWRSPLAWQVTVFF 206 (355)
T ss_pred HHHHHHHHH---HHHhhhhccccCCC-----------------------CCCC---CCCCch----hhcCHhHHHHHHHH
Confidence 665433222 22345443211110 0000 001122 44567777666666
Q ss_pred HHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CchhHHHHHHHHHHHHHHHhhhcc
Q 013378 255 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAACINMFICSISW 333 (444)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444)
++....+.....++|.|+++ .|++..+.+...+...++.++++ +..+++.||+ ++|+.+..+..+..++.+.+.+..
T Consensus 207 ~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 207 GLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 66666667778899999987 49999999999999999999997 5558999999 456666677777777766666554
Q ss_pred CCchHHHHHHHHhhhhhhhHHHHHHHhhccC-CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 334 SAWVPYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
+........+.|++.+...|...+...+..+ ++++++..++.+...+++..++|.+.|.+.|+.+++.
T Consensus 285 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 285 MHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred hhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 4333334566788888888887777665554 4667899999999999999999999999999875443
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.98 E-value=3.2e-29 Score=234.10 Aligned_cols=333 Identities=12% Similarity=-0.010 Sum_probs=247.7
Q ss_pred HHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCch----HHHHHHHHHhH
Q 013378 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----AMLTLPLTLSI 92 (444)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~~ 92 (444)
.+...++.++..|.+|.+.++. +.+..+.|++.+++.++..++++++|+++||+||| +.+.+...+.
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~--------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~- 83 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQ--------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF- 83 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhc--------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH-
Confidence 4556677899999999998554 55668899999999999999999999999999984 3333222221
Q ss_pred HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----h
Q 013378 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 167 (444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~ 167 (444)
........++ +|.+++.|++.|++. +...|...++ .++ +++|+++++......++|..+||.+++.+ +
T Consensus 84 -~~~~~~~~~~---~~~l~i~~~l~g~~~-~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g 156 (382)
T PRK11128 84 -AVAFWFGAHS---FWLLFVAIGLFNLFF-SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG 156 (382)
T ss_pred -HHHHHHhccc---HHHHHHHHHHHHHHH-cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2223334567 899999999999944 6666777778 776 45688888888888899999999998864 8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhH
Q 013378 168 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 247 (444)
Q Consensus 168 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (444)
||..|++.++..++.. +..+..||++++++++ ++.++. ++.++.++++|.+
T Consensus 157 ~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------------------~~~~~~----~~~~~~i~~~~~~ 207 (382)
T PRK11128 157 EQAILWILTAGVASML-LGQLLRPTIMPQGESR------------------------QQESAG----WPAWKALLKEPTV 207 (382)
T ss_pred hhHHHHHHHHHHHHHH-HHHHccCCCCCccccc------------------------cccccc----cchHHHHHcChhH
Confidence 9999988776543333 3333344432211100 000000 1123447788988
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 327 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
+......++..........+.|.|.+| .|.+..+.|.+.+...+...+.. ...+++.||+++++.+..+....+++.+
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~~ 285 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRWG 285 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 887777777777777778888999876 69999999999888878777776 5668999999999999888888888887
Q ss_pred HhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHH-HHHHHHHHHhHHHHHHHHHhh
Q 013378 328 ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 328 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+...++.+..+. .++.|++.+...+....+..+. +++++++..+..+ ....+|..+||.+.|.++|..
T Consensus 286 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 286 LMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777777776555 5667888888888888888876 5667799999886 445677799999999999986
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=2.6e-29 Score=236.43 Aligned_cols=339 Identities=13% Similarity=0.095 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCc-hHHHHHHHHHh
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTLS 91 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~ 91 (444)
+....|+...+.++..|.++.++.++ .+.+..+.|++.+++.++.+++++++|+++||+|| |+++..+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKT-------LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 45567788888999999999888653 35666899999999999999999999999999965 77888888888
Q ss_pred HHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-h--------ccCChhhhhHHHHHHHHHHHhhhhhHHHh
Q 013378 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-A--------DNISERQRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~--------~~~~~~~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
+++..+..+.++ ++.+++.|++.|++. +...+...++ . |..+...|.|..| .+|..+||.+
T Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l 149 (418)
T TIGR00889 80 ALLLFFAAQVTT---PAGMFPVLLANSLAY-MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWA 149 (418)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHH
Confidence 888888888888 898999999999843 4444444433 2 3333334555555 3678888888
Q ss_pred HHhhhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 163 ARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 163 ~~~l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
++.++. +.+|++.+++.++..+ ..+.+||+++.++++ +++.++ ..+...+
T Consensus 150 ~g~l~~~~~~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~-----------------------~~~~~~---~~~~~~~ 202 (418)
T TIGR00889 150 VSLLDIELSNIQLYITAGSSALLGV-FALTLPDIPVAKSTA-----------------------KMSIKV---MLGLDAF 202 (418)
T ss_pred HHHhcccchhHHHHHHHHHHHHHHH-HHhcCCCCCCCcccc-----------------------ccCHHH---HhhhhHH
Confidence 876643 2356666666555444 345678764321110 000000 0011122
Q ss_pred HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Q 013378 240 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--------NQFADLMLIAGLAGTISQLLFMPLLAPILGE 311 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (444)
..+|+|+++...+..++..........+.+.|.++. |.++ ...+...+...+..+++. +..+++.||+|+
T Consensus 203 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g~ 280 (418)
T TIGR00889 203 ILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFGI 280 (418)
T ss_pred HHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhCc
Confidence 356778877777777776665656667778888664 5443 566888888888888887 566899999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccC-C---chHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHH-HHHHHHHHH
Q 013378 312 AKLLSLGLFAACINMFICSISWS-A---WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIV 385 (444)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~ 385 (444)
|+++..+.++..++..++..... . +..+. .++.+++.+...+....++.|.+|+++|++++|+.+ ....+|..+
T Consensus 281 r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 281 KKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999988888766665332 2 22222 456677777778888899999999999999999997 567899999
Q ss_pred hHHHHHHHHHhh
Q 013378 386 SPLIFSPLTALF 397 (444)
Q Consensus 386 ~~~~~g~l~~~~ 397 (444)
||.+.|.+.|+.
T Consensus 361 Gp~l~G~l~~~~ 372 (418)
T TIGR00889 361 GYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHHHHHh
Confidence 999999999986
No 73
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.98 E-value=6.9e-30 Score=237.95 Aligned_cols=342 Identities=18% Similarity=0.157 Sum_probs=244.7
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
.++..++..++...+.....|.+|.++++ +++.+..+.+++.+++.++..+++++.|+++||+|||+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKD-------DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHH-------HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 34566777777788888889999964433 33666788899999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhcc-CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-
Q 013378 89 TLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF- 165 (444)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~- 165 (444)
++..++.+++++++ + ++.+++.|+++|++. +.. +....+ .|++|+++|+++.++.....++|..+++.++..
T Consensus 75 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS---YSVLLLLRLFIGIAG-GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhc-hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999998 8 999999999999953 544 456788 999999999999999987777776666555432
Q ss_pred -------------hhhHHHH-HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccC
Q 013378 166 -------------LSTTSAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 231 (444)
Q Consensus 166 -------------l~~~~~f-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (444)
.+||+.| +..+++..+..++.....+|++++++++++.+.. ++. .. .++
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~----~~---~~~ 212 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK----------GAR----WS---VGT 212 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc----------ccc----cc---ccc
Confidence 2699999 4445554444455555566665432211100000 000 00 000
Q ss_pred CchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Q 013378 232 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 311 (444)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (444)
+..++ .+..+++|+++...+..+...........+.|.|+++.+|+++.+.+.+.....+..++++ +..+++.||+++
T Consensus 213 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~ 290 (366)
T TIGR00886 213 GALGD-QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGG 290 (366)
T ss_pred hhHHH-HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhcc
Confidence 11112 2224556777776666666666666778889999999999999999988888888888887 566899999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcc----CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHH
Q 013378 312 AKLLSLGLFAACINMFICSISW----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 382 (444)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 382 (444)
|+....+......+..++.... +.+.... ..+..++.+...+..++...+..| +++|++.|+.+...++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 291 ARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 8877777666655555444322 2222222 334455566666677777888777 78999999999888765
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.98 E-value=3.1e-29 Score=235.62 Aligned_cols=356 Identities=12% Similarity=0.041 Sum_probs=249.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.++.+....++...+.+...|.+|.++.+.. +.+..+.|++.+++.++..+++++.|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVN-------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 45677777888889999999999999986543 55667889999999999999999999999999999999887
Q ss_pred HHHhHHHHHHH---HhccC--chhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHH
Q 013378 88 LTLSIIPLAIL---AYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTL 161 (444)
Q Consensus 88 ~~~~~~~~~~~---~~~~~--~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 161 (444)
....+++.... .+.+. .......++.|++.|++. +...+....+ .|..+ ++++.++......++|..+||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVF-SAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 76665544322 22221 011344566788888833 5555666666 66433 3455677778888899999999
Q ss_pred hHHhh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHH
Q 013378 162 AARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 238 (444)
Q Consensus 162 l~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (444)
+++.+ +||.+|++.+.+.++..+..+...||++++++.+ + +. + .++ ++++.++ .
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~-~----~~~---~~~~~~~-~ 208 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-N-------------AL-G----ANA---SAFSLKL-A 208 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-c-------------cc-c----ccc---CCCCHHH-H
Confidence 88864 8999999988877666555544444433211110 0 00 0 000 0011122 3
Q ss_pred HHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhcc---CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 239 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
+..+++|.++...+..+.....+.....+.+.|+++.+ +.+....|...+...+...+.. ...+++.||+++|+.+
T Consensus 209 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l 287 (396)
T TIGR00882 209 LELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNAL 287 (396)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhH
Confidence 34667787776666665555555555567788877654 4555667888888888888886 5558999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHH-HHHHHHHHHHHhHHHHHHH
Q 013378 316 SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l 393 (444)
..+..+.++........++.+..+. ..+.+++..........+..+..|++.+++..+. .+....+|+.++|.+.|++
T Consensus 288 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l 367 (396)
T TIGR00882 288 LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM 367 (396)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH
Confidence 8888888887777666666665544 4445655555445555667777888888887776 6788999999999999999
Q ss_pred HHhh
Q 013378 394 TALF 397 (444)
Q Consensus 394 ~~~~ 397 (444)
.|..
T Consensus 368 ~~~~ 371 (396)
T TIGR00882 368 YDSI 371 (396)
T ss_pred HHhc
Confidence 9976
No 75
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.6e-30 Score=241.10 Aligned_cols=363 Identities=15% Similarity=0.123 Sum_probs=273.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (444)
++++.+..+.|++.+.++.|+++++++.|+++||+|-|+++..+.++.++++++..++.+.+ ++.+++.|++||+ +.|
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl-~~g 143 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGL-GQG 143 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHhHH-HHh
Confidence 46778889999999999999999999999999999999999999999999999999987644 5688999999999 668
Q ss_pred hhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013378 124 SINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 197 (444)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~-----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 197 (444)
..+|+...+ .+|.|++||++..++...+..+|.+++-.+++. +||+++|++.++++++..++.+++..|+|.++
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 889999999 999999999999999999999999988766665 49999999999999888887777778877664
Q ss_pred CCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccC
Q 013378 198 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 277 (444)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 277 (444)
+...++| .+..++.+.. ++..++.+.|+++ +++++.+|...+..+..++....+..+.|.|+++.+|
T Consensus 224 ~~is~~E------l~~I~~~k~~---~~~~~~~~vP~~~----i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~ 290 (466)
T KOG2532|consen 224 PNISEKE------LKYIEKGKSE---AHVKKKPPVPYKA----ILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLG 290 (466)
T ss_pred CCCCHHH------HHHHHhcccc---cccCCCCCCCHHH----HHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC
Confidence 4321110 0000000000 0001112235554 7889999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc---------hhHHHHHHHHHHHHHHHhhhccCCch--HHHHHHHHh
Q 013378 278 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------AKLLSLGLFAACINMFICSISWSAWV--PYATTAFSV 346 (444)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~ 346 (444)
++..+.|++.++..+...+.. +..|.++||..+ |..-.++....+++++.+.+.++... ......+..
T Consensus 291 f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~ 369 (466)
T KOG2532|consen 291 FDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAI 369 (466)
T ss_pred CChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHH
Confidence 999999999999999999997 666899998754 33345566677777777777774333 222333333
Q ss_pred h-hhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHH
Q 013378 347 L-VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 425 (444)
Q Consensus 347 ~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (444)
+ .+...+..+.-..+.. +++.+..+|+.+....+.++++|.+.|.+... +... .|.. +|++.+++.+++.+..
T Consensus 370 ~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~--~t~~--eW~~-VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 370 GLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTD--NTRE--EWRI-VFLIAAGILIVGNIIF 443 (466)
T ss_pred HHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCC--CCHH--HHHH-HHHHHHHHHHHhchhe
Confidence 3 3333344433344434 48899999999999999999999999998841 1100 1222 5566666665555444
Q ss_pred Hhc
Q 013378 426 LMM 428 (444)
Q Consensus 426 ~~~ 428 (444)
...
T Consensus 444 ~~f 446 (466)
T KOG2532|consen 444 LFF 446 (466)
T ss_pred eEe
Confidence 333
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.98 E-value=3.3e-29 Score=266.39 Aligned_cols=358 Identities=15% Similarity=0.123 Sum_probs=264.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHH
Q 013378 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (444)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (444)
+.+.+..+++..++..++.......+..+....+ +. +.+....+++.+++.++.+++++++|+++||+|||++++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY--DG---SEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--Cc---ccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 3556666677777766666544444443443332 11 233456799999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHH---hccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHH
Q 013378 86 LPLTLSIIPLAILA---YRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTL 161 (444)
Q Consensus 86 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 161 (444)
.+.++..+..++.. .+++ ++.+++.|+++|+ +.+...+...++ .|++|+++|++++++.+.+.++|.++||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGA-QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 98877666655544 3466 8999999999999 557888888999 99999999999999999999999999999
Q ss_pred hHHhhh-------------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCcc
Q 013378 162 AARFLS-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 228 (444)
Q Consensus 162 l~~~l~-------------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (444)
+++.+. |++.+.+..+...+..++..+.+||.++.....+ .+...
T Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 215 (1146)
T PRK08633 158 LFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF----------------------DKKKY 215 (1146)
T ss_pred HHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc----------------------ccccc
Confidence 988752 2333333333333333444455677654322210 00000
Q ss_pred ccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCch-hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013378 229 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP 307 (444)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (444)
......++.++.+++++.++...+..++..........++|.|+++.+|++.. ..+++.+..+++.++++ ++.+++.|
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~ 294 (1146)
T PRK08633 216 LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSG 294 (1146)
T ss_pred ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhC
Confidence 01112344556677888888777777766666667788899999998999998 88999999999888887 55689999
Q ss_pred hhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHh
Q 013378 308 ILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 386 (444)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 386 (444)
|+++++.+.++.++.+++.+++.+..+.+...+ .+++|++.+...+...+++.+..|++.||+++|+.+.+.+++..++
T Consensus 295 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~ 374 (1146)
T PRK08633 295 RHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLF 374 (1146)
T ss_pred CceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHH
Confidence 999988888888877777777776666554444 5667888888888889999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 013378 387 PLIFSPLTA 395 (444)
Q Consensus 387 ~~~~g~l~~ 395 (444)
+.+.+.+..
T Consensus 375 ~~~~~~l~~ 383 (1146)
T PRK08633 375 LALTTLFSG 383 (1146)
T ss_pred HHHHHHHHH
Confidence 877665544
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=4e-28 Score=228.35 Aligned_cols=367 Identities=13% Similarity=0.074 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-----CchH-HHHH
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA-MLTL 86 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~ 86 (444)
++...+..++..+...+.+|.|+++. +.+..+.|++..+... .+..+++|+++||+ |||| .+..
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~--------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~ 73 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVE--------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLL 73 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHH
Confidence 34455677888899999999999665 6666888998766665 68899999999999 8765 7888
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+..+.+++....++.++...++.+++..++.++ ..+...+...++ .|+.|+|||+++.++...+.++|.++++.++..
T Consensus 74 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 74 TQVGLAASIAAMAFCPPHAALWPLAGLAVLVAF-LSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 888888888888887432237778888777787 446777889999 999999999999999999999999998876544
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHH
Q 013378 166 -----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 240 (444)
Q Consensus 166 -----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (444)
.+||..|++.+++.++..+ ..+..||++++++++ ++ .+++.++.++.
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~------------------------~~---~~~~~~~~~~~ 204 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGAL-TTLWAPEPEVPARPP------------------------RS---LGEAVVGPLRD 204 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHH-HHHhcCCCccccccc------------------------ch---hHHHHHHHHHH
Confidence 3899999998887655443 345667754321110 00 00022344556
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
++++|.++..++..++..........+.+.++.+.+|+++.+.+.+....+.. .+++. ...+++.||+++|+.+..+.
T Consensus 205 l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~ 283 (402)
T PRK11902 205 FFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFG 283 (402)
T ss_pred HHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHH
Confidence 78888888777666665554443344555666677799999999987666554 56665 66789999999988877666
Q ss_pred HHHHHHHHHh---hhcc-CCchHHH-HHH----HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHH
Q 013378 320 FAACINMFIC---SISW-SAWVPYA-TTA----FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 390 (444)
Q Consensus 320 ~~~~~~~~~~---~~~~-~~~~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 390 (444)
.+..+..+.+ ...+ +.+.... ..+ .+++.+...+....++++..| ++..+..+....++..+++.+.
T Consensus 284 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 284 VLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASVGRVYVGPTS 359 (402)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHH
Confidence 6555443322 3333 3333333 222 233344445555555555555 4455666666778887777799
Q ss_pred HHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 391 SPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
|.+.|.. ++. ..+.+.+++.+++++..++.+++
T Consensus 360 G~l~~~~-G~~-------~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 360 GYLVEAY-GWP-------GFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHh-ChH-------HHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999987 332 24566666666666666555554
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=2.1e-28 Score=226.85 Aligned_cols=317 Identities=15% Similarity=0.079 Sum_probs=232.7
Q ss_pred HHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-----CchHH-HHHHHHHhHHHHHH
Q 013378 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAM-LTLPLTLSIIPLAI 97 (444)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~~~ 97 (444)
.+...+.+|.+.+|. +.+..+.|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++....
T Consensus 4 ~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 4 LGLVGNTLPYWLRSK--------NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred chhHHhHHHHHHHHc--------CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 355677888887554 6666788888655 555554 89999999998 89886 56777788888777
Q ss_pred HHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hh-----
Q 013378 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LS----- 167 (444)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~----- 167 (444)
.++.++...++.+....++.+. ..+...+...++ .|++|+|+|+++.++...+.++|.++++.+++. .+
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAF-FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 7777543336777788888887 446777888999 999999999999999999999999999988865 36
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 168 ---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 168 ---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
||.+|++.++..++..+..++..||++++++++ + +++++.++.++.++++
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-----------------------~----~~~~~~~~~~~~~~~~ 205 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP-----------------------K----PLTQAVLKPIREFFQR 205 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc-----------------------h----hHHHHHHHHHHHHHHh
Confidence 999999998876665544444556643211100 0 0001223344445555
Q ss_pred hh---HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 245 VT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 245 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
|. ++...+..++..........+.|.|+++ .|+++.+.+......+. ..+++. +..+++.||+|+|+.+..+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 206 KNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHH
Confidence 54 6666666666777777788999999988 79999999988887775 445554 777899999999988888877
Q ss_pred HHHHHHHHhhhc-----------cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHH
Q 013378 321 AACINMFICSIS-----------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 380 (444)
Q Consensus 321 ~~~~~~~~~~~~-----------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 380 (444)
+..+....+.+. ++.+.... .++.+++.+...+...++.+|.+|+++||+.+|+.++..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 777666544432 12233333 4455788889999999999999999999999999887765
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.4e-27 Score=205.08 Aligned_cols=348 Identities=16% Similarity=0.133 Sum_probs=277.9
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
.+..+....++.++......+.+|.+. +.++++..+.++++.+++.++.+.+++.|++.+|+|+|+-++.+.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~--------~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLK--------EVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHH--------HHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 344555566677778888888998876 445888899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
.++++++.+..-+.+...+..++++-++.|.|. +....+.+.+ ....++++..+.+++.+...++|.++||++++.+
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi-~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILASGI-GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhh-HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999999865544443889999999999944 7888899999 9999999999999999999999999999998763
Q ss_pred ----------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCc
Q 013378 167 ----------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 224 (444)
Q Consensus 167 ----------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (444)
.++++|...+....+..+.. ...|.+..++..+
T Consensus 165 ls~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~-~~~k~p~~~~~~~------------------------ 219 (422)
T COG0738 165 LSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLI-LLSKLPDLQVAAP------------------------ 219 (422)
T ss_pred HhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH-HhccCCcCCcccc------------------------
Confidence 24677777776644333322 2222221111111
Q ss_pred CCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013378 225 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 304 (444)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (444)
+ ..+.. + .....++++|+++...+..+++........++++.|+.+..|.+..+.+...+....+.++++ +.+.+
T Consensus 220 ~-~~~~~-~--~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig~~ 294 (422)
T COG0738 220 S-LGASG-S--AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIGSA 294 (422)
T ss_pred c-ccccc-c--chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0 00000 0 023347789999999999999999999999999999999779999999999999999999998 55568
Q ss_pred HhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHH
Q 013378 305 LAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANI 384 (444)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 384 (444)
+.+|+...+.+.....+..+.++...+.++.+.++...++|.+++..+|...+...+..| ++.. ..|..-.+.-+|++
T Consensus 295 lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGA 372 (422)
T COG0738 295 LMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGA 372 (422)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeeheecch
Confidence 888999999998888777777777788888888888889999999999999999999999 4333 34445566778999
Q ss_pred HhHHHHHHHHHhh
Q 013378 385 VSPLIFSPLTALF 397 (444)
Q Consensus 385 ~~~~~~g~l~~~~ 397 (444)
+.|.+.|++.|..
T Consensus 373 iiP~l~G~i~d~~ 385 (422)
T COG0738 373 IIPPLQGVIADMF 385 (422)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999987
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=1.6e-27 Score=227.37 Aligned_cols=345 Identities=14% Similarity=0.093 Sum_probs=251.3
Q ss_pred HHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc----cCchH-HHHHHHHHhH
Q 013378 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTLSI 92 (444)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~ 92 (444)
+...+..++..+.++.+..+ +.++++.+.|++.++..+..++..|+.|+++|| +|||| .++.+....+
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~-------~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~ 81 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTD-------VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH
Confidence 33445556666666666644 346777899999999999999999999999998 67744 6777888888
Q ss_pred HHHHHHHhccCch---hhHHHHHHHHhhhhcccchhhhhhhhh-hccC-ChhhhhHHHHHHHHHHHhhhhhHHHhHH---
Q 013378 93 IPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAY-ADNI-SERQRASAFGILLGVLSASFVCGTLAAR--- 164 (444)
Q Consensus 93 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~~--- 164 (444)
++..++.+.++.. ....+++.+++.++ +.+...+...++ .|.. +++||++..++.+....+|..+++.+.+
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~ 160 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGL-FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLV 160 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887766421 14566777888887 334555556778 8877 5789999999988888887666543321
Q ss_pred --------hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHH
Q 013378 165 --------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 236 (444)
Q Consensus 165 --------~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (444)
..+||+.+.+.+++.++..+..++..||++++.+++ ++++.+.++
T Consensus 161 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~ 213 (437)
T TIGR00792 161 SYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN---------------------------IEKKLSLKQ 213 (437)
T ss_pred HHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---------------------------cccCCCHHH
Confidence 237999999988887777666666677754211110 001124566
Q ss_pred HHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHH
Q 013378 237 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 316 (444)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (444)
.++.++++|.++...+..++..........+.+.|.++.++ ++...+.+.....+..+++. ...+++.||+|+|+.+.
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHH
Confidence 67778889999888877777777766666666667766666 45566777777777778876 55589999999999998
Q ss_pred HHHHHHHHHHHHhhhcc-CCchHHH-HHHHHhhhhhhhHHHHHHHhhccC-------CCcchhHHHHHHHHHHHHHHHhH
Q 013378 317 LGLFAACINMFICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSP 387 (444)
Q Consensus 317 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~ 387 (444)
.+..+..++.+.+.+.+ +.+.... .++.+++.+...+..+++..|..| ++.+|++.|+.+....+|..+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 88888887777666543 2333333 455678888888888899888765 45679999999999999999999
Q ss_pred HHHHHHHHhhhhc
Q 013378 388 LIFSPLTALFLSK 400 (444)
Q Consensus 388 ~~~g~l~~~~~~~ 400 (444)
.+.|.+.+.. ++
T Consensus 372 ~i~g~ll~~~-G~ 383 (437)
T TIGR00792 372 FLVGLILGII-GY 383 (437)
T ss_pred HHHHHHHHHc-CC
Confidence 9999999876 44
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=3.8e-27 Score=224.75 Aligned_cols=379 Identities=10% Similarity=-0.010 Sum_probs=259.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc-cCchHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAM 83 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~ 83 (444)
+++|.++.++...+...++.....+.+|.|+++. .+.+.+..+.|++.+.+.++..+++++.|+++|| +|||++
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 3466788888889999999999999999998653 1246677889999999999999999999999999 899999
Q ss_pred HHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhh---hhHHHHHHHHHHHhhhhhH
Q 013378 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQ---RASAFGILLGVLSASFVCG 159 (444)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~---r~~~~~~~~~~~~lg~~~g 159 (444)
+..+.++.+++.++.+++++ .+.+++.|.+.|+ +.|...+...++ +|++|+++ |+++++++....++|..+|
T Consensus 82 l~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~-g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAV-GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 99999999999999999888 8888899999999 447777888889 99998754 8889999999999999999
Q ss_pred HHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC-CCCccccccccc--------------ccCCCC
Q 013378 160 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL-TRPIITEETEGV--------------NQNESN 220 (444)
Q Consensus 160 ~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~ 220 (444)
|.+++.+ +||+.|.+.++..++. ++.+...++..++.+++++ .++..++..... ....+.
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV 236 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998874 8999999887554333 3333333432221111000 000000000000 000000
Q ss_pred CCCc--------------CCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchh----
Q 013378 221 SPVK--------------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ---- 282 (444)
Q Consensus 221 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---- 282 (444)
.... ..... ++...+ ....|...+..+.+...+.+..+....+.++.+.++..+.+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip 313 (475)
T TIGR00924 237 VIANILLMTVTLAVIIFFFRLAF-KPRLDA--VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVP 313 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccCCH--HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEEC
Confidence 0000 00000 000000 00011223444555566666666667777888877654444222
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHhhh-hCchhHH--HHHHHHHHHHHHHhhh---------ccCCchHHH-HHHHHh
Q 013378 283 FADLMLIAGLAGTISQLLFMP---LLAPI-LGEAKLL--SLGLFAACINMFICSI---------SWSAWVPYA-TTAFSV 346 (444)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~---~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~g~ 346 (444)
.+++.+..++..++.+.+... ++.|| .+++... .+|.++.++++..+.+ ..+.|.... .++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 577888888888877755432 33443 2223333 6778888777776654 234444444 677899
Q ss_pred hhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 347 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+.....|..+++..+..|++.||+++|+......+|..+++.+.....+.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998888888877766543
No 82
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.6e-29 Score=224.63 Aligned_cols=363 Identities=14% Similarity=0.171 Sum_probs=255.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++.+.++.+...+..++.+.+..+.+..- +.+++++...|++++.+.+.+.+.+|++|+++||++||+++..
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~--------~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQ--------TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHH--------HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 45567777888888888887777666553 4557777888999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
|..++.++.+.++++.. +|++.++|.+.|+ +.+.+.|.++++ +|.+|+++|++.+++++.+..+|..+|.+.+..
T Consensus 104 G~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999977 9999999999999 668888999999 999999999999999999999998888766655
Q ss_pred h-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHH
Q 013378 166 L-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 240 (444)
Q Consensus 166 l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (444)
. .|||.|+..+++++++.++..++++|+++...++ .+ .. .+. .+...+..+-++.
T Consensus 180 va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~--~~--------------~~---~~~-~~~~ts~~kDl~~ 239 (493)
T KOG1330|consen 180 VASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE--VD--------------GE---NKM-VKPFTSVWKDLKV 239 (493)
T ss_pred eccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc--cc--------------cC---CcC-CCCccchHHHHHH
Confidence 3 4999999999999999999999999987653221 00 00 000 1111122223444
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHh---hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC----chh
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK---AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG----EAK 313 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~ 313 (444)
+.+++.+....+......+....+.-+.|.+.. +.-|.+..+..++..+...++.++. +.+|.++||+. +..
T Consensus 240 l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~~~~~~~~ 318 (493)
T KOG1330|consen 240 LAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLSRIFPNSG 318 (493)
T ss_pred HHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHHHHhccccc
Confidence 555566666566666666655555555554432 3335555555555666666667775 66678888743 211
Q ss_pred HHHH-------HHHHHHHHHHHhhhccC--CchHHHHHHHHhhhhhhhHH-HHHHHhhccCCCcchhHHHHHHHHHHH-H
Q 013378 314 LLSL-------GLFAACINMFICSISWS--AWVPYATTAFSVLVVFATPS-FRSIVSKQVGPNEQGKAQGCISGISSF-A 382 (444)
Q Consensus 314 ~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~-g 382 (444)
.... +....+..+.+.....+ .+..+.++++|......... ..-+..+.+|+++|.++.++...+..+ |
T Consensus 319 ~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fg 398 (493)
T KOG1330|consen 319 TLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFG 398 (493)
T ss_pred chhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhc
Confidence 1111 11222222222222222 33333455556555544433 334568899999999999998777655 5
Q ss_pred HHHhHHHHHHHHHhhhhcCC
Q 013378 383 NIVSPLIFSPLTALFLSKGA 402 (444)
Q Consensus 383 ~~~~~~~~g~l~~~~~~~~~ 402 (444)
.+-+|.+.|.+.|+..+++.
T Consensus 399 d~~~p~ivGilsd~l~g~~~ 418 (493)
T KOG1330|consen 399 DAASPYIVGILSDKLRGYKP 418 (493)
T ss_pred cCCCcceehhHHHHhhCCCc
Confidence 55556699999999866653
No 83
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=3.9e-26 Score=214.15 Aligned_cols=366 Identities=13% Similarity=0.095 Sum_probs=247.3
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHH--HHHHHHHHHHHhhhccc-cccccCchHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQ--QAIIGLGTLVMMPVIGN-LSDQYGRKAMLTL 86 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~~~~~~~G~-l~Dr~Grr~~l~~ 86 (444)
+..+....+..++..++..|.+|.+.++. +.+..+.|++ .+...+...+.+|+++. .+||+||||..++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~--------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED--------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 44556667888899999999999999665 5556788987 46778888899999955 7999999998765
Q ss_pred HHHH-hHHHHHHHH-hccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 87 PLTL-SIIPLAILA-YRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 87 ~~~~-~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
...+ .+......+ +.........++..-++.++ ..+...+...++ .|..++++++...+....+..+|.++|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASL-ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5533 222222222 21111112333444444555 335666778888 8888888889888888888889999988644
Q ss_pred H----hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 164 R----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 164 ~----~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
+ .++||.+|++.+++.++..+..++ .+|++++++++ + ++ . .+.++
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~~-----------------------~---~~---~-~~~~~ 202 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPEA-----------------------P---LA---R-RASLF 202 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCcccc-----------------------c---hh---h-HHHHH
Confidence 4 469999999999887665555444 44332111110 0 00 0 11133
Q ss_pred HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 240 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
...|+|.++......++..........+.+.|++|. |+++++.|......+....+.+.+..+++.||+++|+.+..+.
T Consensus 203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 456777787777777777777777888899999885 9999999998888776555444467799999999999888776
Q ss_pred HHHHHHHHHhhh-c-----cCCchHHHH-HHHHhhhhhhhHHHHHHHhhccCC-CcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 320 FAACINMFICSI-S-----WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 320 ~~~~~~~~~~~~-~-----~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
.+..+..+.... . .+.+..+.. .+.++..+...+..++...+..++ +.+|+.++..+...++|..++|.+.|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655332222211 1 111111222 233455677778888887777776 88999999999999999999999999
Q ss_pred HHHHhhhhcCCCcccchhHHHHHHHHHHHHHHH
Q 013378 392 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 424 (444)
Q Consensus 392 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (444)
.++|.. ++.. .+.+.+++.+++...
T Consensus 362 ~l~~~~-G~~~-------~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 362 YLTDRF-GYAG-------GFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHH-ccHH-------HHHHHHHHHHHHHHH
Confidence 999986 4332 345555555554443
No 84
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.1e-29 Score=220.65 Aligned_cols=351 Identities=19% Similarity=0.170 Sum_probs=266.8
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhC------------------------------------------CCCcchh
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALC------------------------------------------PGLDECS 47 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------------------~~~~~~~ 47 (444)
+..+.+..+.+.+-...+.|.+|.|+++.-+ .+..+.+
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 3455677778888889999999999988642 0013445
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhh
Q 013378 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINC 127 (444)
Q Consensus 48 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~ 127 (444)
.++.++|++++...+.+++.+++.|.+.||+|+|-.+++|+.+...+++++++.++ +++++++|.+||+|+ ++...
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgvgs-A~~~t 178 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGVGS-AFADT 178 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhhhH-HHHHh
Confidence 56689999999999999999999999999999999999999999999999999999 999999999999955 77777
Q ss_pred hhhhh-hccCChh-hhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 013378 128 LALAY-ADNISER-QRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD 201 (444)
Q Consensus 128 ~~~~~-~~~~~~~-~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 201 (444)
+..++ +|.+|++ ||++++|+...+.++|.++||..|+.+ |.+.+|++.+++.++-..+..+.++.++.++++.
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~- 257 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST- 257 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc-
Confidence 89999 9999865 689999999999999999999999985 8899999999998777776666565544333111
Q ss_pred CCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCch
Q 013378 202 LTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN 281 (444)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 281 (444)
.+..++++ +.++|.++.........+.........++.+..|.+.-+.-
T Consensus 258 ---------------------------~~~~~~~~----Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 258 ---------------------------EQGTPMWS----LLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred ---------------------------ccCccHHH----HHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 01113333 66788888877777777777777788888888888775555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh--HHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHH--
Q 013378 282 QFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFR-- 356 (444)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-- 356 (444)
+.|..+....+...++..+. +.+.||+++.+ ....+++...++.....+.++...+++ .+..+++.+.......
T Consensus 307 ~~G~~fLp~~~~y~ig~~lf-g~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLF-GKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred ceeeeecccccchhccCchH-HHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 88888888888888997555 79999999433 334455555555556666665444443 3333333333332222
Q ss_pred -HHHhhccCCC---cchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 357 -SIVSKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 357 -~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+..+....+ ..|.+.++......+|.++||.++|.+.+..
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 2233322223 5689999999999999999999999999876
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=4.9e-26 Score=217.08 Aligned_cols=373 Identities=10% Similarity=0.055 Sum_probs=245.0
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc-cC
Q 013378 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YG 79 (444)
Q Consensus 1 M~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~G 79 (444)
|++.+.+|.++.++...+...+++....+.++.|+++.+ +.+..+.+++.+.+.....+..++.|+++|| +|
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l-------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G 79 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL-------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG 79 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc
Confidence 344444677888888888999999999999999987654 4444666888888888888888999999999 99
Q ss_pred chHHHHHHHHHhHHHHHHHHhccCchhhH-HHHHHHHhhhhcccchhhhhhhhh-hccCChh--hhhHHHHHHHHHHHhh
Q 013378 80 RKAMLTLPLTLSIIPLAILAYRRSISFFY-AYYALRTLTAMVCEGSINCLALAY-ADNISER--QRASAFGILLGVLSAS 155 (444)
Q Consensus 80 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~--~r~~~~~~~~~~~~lg 155 (444)
|||+++.+.+++.++.+.++++++ .. .++++|+++|+ +.|...|...++ .|.+|++ +|+++++++..+.++|
T Consensus 80 ~r~~~~~g~~~~~~g~~~~~~~~~---~~~ll~~~~~l~~i-g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig 155 (489)
T PRK10207 80 TKRTIVLGAIVLAIGYFMTGMSLL---KPDLIFIALGTIAV-GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIG 155 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc---chhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHH
Confidence 999999999999999999999876 33 35589999999 447777888899 9999876 4578899999999999
Q ss_pred hhhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC---CCCCccccc----------c-cccccC
Q 013378 156 FVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD---LTRPIITEE----------T-EGVNQN 217 (444)
Q Consensus 156 ~~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~----------~-~~~~~~ 217 (444)
..+||.++++ +|||+.|++.++. .+..+..+...++..++.+++. +.|...... . ......
T Consensus 156 ~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~ 234 (489)
T PRK10207 156 SLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHN 234 (489)
T ss_pred HHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9998887776 4999999986543 3444444444443322211000 001000000 0 000000
Q ss_pred CCCCCCc------------CCccccCCchHHHHHHhccchhHHHHHH--HHHHHHhhhcchhHHHHHHHhhccCcCc---
Q 013378 218 ESNSPVK------------IPVCKKIPSIRDLICLLRSSVTLSQAAV--VAFFSGLSEGGMQASFLYFLKAQFHFNK--- 280 (444)
Q Consensus 218 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~--- 280 (444)
....... -..+++. + ...|+|.+....+ ...+.+..+......++.|.++..+.+.
T Consensus 235 ~~~~~~~~~~~~~i~~~~f~~~~~~~-~------~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~ 307 (489)
T PRK10207 235 VEVANLVLIVLSIVVTIIFFREAFKL-D------KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGF 307 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcC-C------HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccce
Confidence 0000000 0000000 0 1223344333222 2344445555555677777765333221
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh-------HHHHHHHHHHHHHHHhh-----hc-----cCCchHHH-H
Q 013378 281 -NQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-------LLSLGLFAACINMFICS-----IS-----WSAWVPYA-T 341 (444)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~-~ 341 (444)
.....+.+...+..++...+. +++.||.++|+ -+..|+++.+++++.+. .. .+.|.... .
T Consensus 308 ~i~~~~~~~~n~~~iii~~pl~-~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~ 386 (489)
T PRK10207 308 SINPVSFQALNPFWVVVASPIL-AGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVY 386 (489)
T ss_pred EECHHHHHhHhHHHHHHHHHHH-HHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Confidence 012344455555665665454 68999998886 36677777766664321 11 12233333 5
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
++.+++..+..|...+.+.+..|++.+|.++|+.+...++|+.++..+.+..
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6779999999999999999999999999999999999999999988777654
No 86
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.96 E-value=2.9e-25 Score=205.16 Aligned_cols=368 Identities=20% Similarity=0.229 Sum_probs=264.0
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccC-chHHHHHHHHHh
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-RKAMLTLPLTLS 91 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~ 91 (444)
+....|+..+..+...|.+|.|+++. +.+..++|.+.++..+..+++++++|.++||.+ +||++.+..++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~--------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESR--------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 44456677788899999999998654 566689999999999999999999999999986 577887877777
Q ss_pred HHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHh-----HHh
Q 013378 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLA-----ARF 165 (444)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l-----~~~ 165 (444)
++........++ ++.+++.-++..++- ....|...++ .+..+ ++++-.|......++|.+++... .+.
T Consensus 79 ~~~~~~~~~~~~---f~~~~~~~~l~~~~~-~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 79 ALALLLLAFSSS---FWWLFVIMLLFSFFF-SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 777777777777 777777777777733 4555777777 66665 34555666666777777766432 222
Q ss_pred hhh---HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhc
Q 013378 166 LST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 242 (444)
Q Consensus 166 l~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (444)
.++ ...+++.+...++.. ...+.+|+.|++++.+ ++.++ ...++.+ .++
T Consensus 153 ~~~~~~~~~~~i~~~~~~ll~-~~~l~lp~~~~~~~~~------------------------~~~~~--~~~~~~~-~ll 204 (400)
T PF03825_consen 153 LGISGTSLIFYIAAILSLLLA-GFALFLPKTPPKRSAK------------------------ESVKK--LLGLDAL-KLL 204 (400)
T ss_pred hccccccHHHHHHHHHHHHHH-HHHHhCCCCccccccC------------------------CCccc--ccchHHH-HHh
Confidence 222 345566555543333 2334578776332221 00000 0112322 367
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
|+|++...++..++........+.+.+.|+++.-|.+....+..++...+..++. ....+++.+|+|.++++.++.+..
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~-f~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPF-FFFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHH
Confidence 7888888888888888889889999999999874477777788787777777777 467799999999999999999999
Q ss_pred HHHHHHhhhc-cCCchHHH-H----HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHH-HHHHHHHhHHHHHHHHH
Q 013378 323 CINMFICSIS-WSAWVPYA-T----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTA 395 (444)
Q Consensus 323 ~~~~~~~~~~-~~~~~~~~-~----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~ 395 (444)
++-..+++.. ++.+..+. . .+.|+..+........++.+.+|++.|++++++++.. ..+|..+|..++|+++|
T Consensus 284 ~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999888887 44443332 2 2368888888999999999999999999999998775 57899999999999999
Q ss_pred hhhhcCCCcccchhHHHHHHHHHHHHHHHH
Q 013378 396 LFLSKGAPFNFPGFSIMCIGLASMVAFIQS 425 (444)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (444)
+. +.+..+.+.. .+.+.+++.++..+..
T Consensus 364 ~~-g~~~~~~~~~-~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 364 AF-GARGMFDWSA-VFLVFAVMALVILVLF 391 (400)
T ss_pred Hh-cchhhhhHHH-HHHHHHHHHHHHHHHH
Confidence 98 5444332222 3344444444433333
No 87
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.5e-27 Score=219.26 Aligned_cols=330 Identities=15% Similarity=0.039 Sum_probs=243.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (444)
+|.+....+.+.+.+++.++++++.++.|.+.||++-.+.+....+.+++..++.....| ++.+++.|++.|+ .++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl-~es 149 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGL-FES 149 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH-Hhc
Confidence 444566678899999999999999999999999999999999999999888888888888 9999999999999 668
Q ss_pred hhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----------hhhHHHHHHHHHHHHHHHHHHHHhccC
Q 013378 124 SINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTSAFQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----------l~~~~~f~~~~~~~~~~~~~~~~~~~e 192 (444)
..+|....+ +.|+.++||+..++++....++|.++|++++.. .||||.|++.+++.++..++.++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 888999999 999999999999999999999999999988765 289999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHH
Q 013378 193 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 272 (444)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (444)
.|.+..-.+++++....++.+..+.++. .++ . + +..++..+++|++|...+..++.....+++.+++|.|+
T Consensus 230 ~P~~~~fl~~~ek~~~~~~~~~~~~~~~---~~~--~---~-~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l 300 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELVVERLRESPSGGI---ENK--F---K-WKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYL 300 (495)
T ss_pred ChhhccccchHHHHHHHHHHHhccCCCc---ccc--c---C-HHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 9875422111111100000000000000 000 1 1 23344577899999999999999999999999999999
Q ss_pred hhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCchhHHHHHHHH-HHHHHHHhhhccCCchHHHH-HHHHh
Q 013378 273 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLLSLGLFA-ACINMFICSISWSAWVPYAT-TAFSV 346 (444)
Q Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~ 346 (444)
++..|++..++..+.....++++++. ++++.++|| ..+|........+ ..++...+............ .....
T Consensus 301 ~~~~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~ 379 (495)
T KOG2533|consen 301 KSNGGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPY 379 (495)
T ss_pred HcCCCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcch
Confidence 99668999999999999999999996 666899999 4455554444333 33444444444434444443 33345
Q ss_pred hhhhhhHHHHHHHhhccCCCcch-hHHHHHHHHHHHHHHHhH
Q 013378 347 LVVFATPSFRSIVSKQVGPNEQG-KAQGCISGISSFANIVSP 387 (444)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~g-~~~g~~~~~~~~g~~~~~ 387 (444)
+.....+......++...++.|. +..+........++.++|
T Consensus 380 ~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 380 GLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred hhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 56667777788887777655543 333333444444444444
No 88
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.96 E-value=1.7e-24 Score=202.32 Aligned_cols=392 Identities=14% Similarity=0.097 Sum_probs=271.8
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc----ccCchHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT 85 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~ 85 (444)
+..+....+-..++++...+.++.|.++. +.+..+.+++..+..+..++.+|+.|+++| |+||||.++
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~l--------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~i 77 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQEL--------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFI 77 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHH
Confidence 33444455556778888889998887443 455688899999999999999999999999 599999888
Q ss_pred HH-HHHhHHHHHHHHhccCchh--------------hHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhh--hHHHHH
Q 013378 86 LP-LTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAY-ADNISERQR--ASAFGI 147 (444)
Q Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r--~~~~~~ 147 (444)
.+ .....++..+++++++... .+..+++-.+..+ +.....+...++ +|.+|+++| +.+.++
T Consensus 78 l~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~-~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 78 AAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDV-ANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 75 6666677777777665100 0222333333344 335555678899 999998765 579999
Q ss_pred HHHHHHhhhhhHHHhHHhh-------------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccc
Q 013378 148 LLGVLSASFVCGTLAARFL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT 208 (444)
Q Consensus 148 ~~~~~~lg~~~g~~l~~~l-------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 208 (444)
.+...++|.++|+.+++.. +.|..|++.+++.++..++..+..||.+..++++.+.+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~---- 232 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS---- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh----
Confidence 9999999999999988753 34778999888877888888888999764322210000
Q ss_pred ccccccccCCCCCCCcCCccccCCchHHHHHHhcc-chhHHHHHHHHHHHHhhhcchhHHHHHHHh-hccCcCchh----
Q 013378 209 EETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQ---- 282 (444)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~---- 282 (444)
+.+ ++ ++ .+....+++.++.+++ +|.++.+++..++.++++..+..+.+.|.. +.++-++.+
T Consensus 233 ----~~~--~~----~~--~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y 300 (477)
T TIGR01301 233 ----EAA--PP----SK--HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKY 300 (477)
T ss_pred ----hcc--cc----cc--cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHH
Confidence 000 00 00 0111234555554443 677888999999999999988888877765 455543321
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHhhhhCc-hhHHHHHHHHHHHHHHHhhhccC------C--------------
Q 013378 283 ------FADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISWS------A-------------- 335 (444)
Q Consensus 283 ------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~-------------- 335 (444)
-.+......+...+.+ +..+++.+|+|+ |+....+.++.++++....+.++ .
T Consensus 301 ~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (477)
T TIGR01301 301 DDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGI 379 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhh
Confidence 1122334444445555 444889999985 67778888888877776654332 1
Q ss_pred -chHHH-HHHHHhhhhhhhHHHHHHHhhccCC--CcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHH
Q 013378 336 -WVPYA-TTAFSVLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSI 411 (444)
Q Consensus 336 -~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (444)
+..+. ..++|+..+..+..-++++++..|+ +..|..+|+.|.+..+.+.+.....|.+.+.+ +.+... .+
T Consensus 380 ~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~-g~~~~~-----~~ 453 (477)
T TIGR01301 380 KASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLF-GGGNLP-----AF 453 (477)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHc-CCCCee-----HH
Confidence 22223 5667888889999999999999985 45599999999999999999999999977766 433222 66
Q ss_pred HHHHHHHHHHHHHHHhcccCCC
Q 013378 412 MCIGLASMVAFIQSLMMSHTPA 433 (444)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~ 433 (444)
.+.++..+++.+...+..|+.+
T Consensus 454 ~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 454 VVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC
Confidence 7888888888888877766654
No 89
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=7.1e-26 Score=218.91 Aligned_cols=369 Identities=17% Similarity=0.143 Sum_probs=245.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhh
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLAL 130 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~ 130 (444)
.+.+++.+...++..+++++.|+++|++|||+.++++.+.+.++.+++++++| +++++++|+++|+|. |.......
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~---~~~l~~GR~l~G~g~-G~~~~~~p 164 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS---WYQLIVGRILTGLGV-GGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhccch-hhhhhcch
Confidence 45699999999999999999999999999999999999999999999999999 999999999999955 66656788
Q ss_pred hh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 013378 131 AY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR 204 (444)
Q Consensus 131 ~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 204 (444)
.+ +|..|++.||...+..+....+|..++..++... +||..+.+..+.+++..+. .+++||+|++..++++.+
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChH
Confidence 89 9999999999999999999999999997777665 6999999999888777666 788999998755433322
Q ss_pred Ccc---ccccccccc--CCCCCCCc-----CCccccCC-chHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHh
Q 013378 205 PII---TEETEGVNQ--NESNSPVK-----IPVCKKIP-SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK 273 (444)
Q Consensus 205 ~~~---~~~~~~~~~--~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (444)
+.. ...+...+. +.+.++.+ +....+.+ ..++.++...+++.+....+..+....+......+.+.+++
T Consensus 244 ~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 244 EAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 221 111110000 00000000 00000000 12222221112222333333333333444455666666665
Q ss_pred hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc----C--------CchHHH-
Q 013378 274 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----S--------AWVPYA- 340 (444)
Q Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~- 340 (444)
.. |.+... .......++...++. +....+.||+|||++++.+...+.++.++++... . .+..+.
T Consensus 324 ~~-g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
T KOG0254|consen 324 SA-GLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVF 400 (513)
T ss_pred hc-CCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHH
Confidence 55 666443 334445556666665 4446999999999999999999998888776431 1 112222
Q ss_pred -HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHH
Q 013378 341 -TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASM 419 (444)
Q Consensus 341 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (444)
.+..........|..+.+.+|.+|.+.|+++.++.....++...+-....-...+.. + .+..+...+....
T Consensus 401 ~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~-~-------~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 401 LCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL-G-------IGGTFGYFGGICL 472 (513)
T ss_pred HHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-c-------ccchHHHHHHHHH
Confidence 222233344456777788999999999999999999999988877765555554442 1 1113333333333
Q ss_pred HHHH-HHHhcccCCCCC
Q 013378 420 VAFI-QSLMMSHTPASS 435 (444)
Q Consensus 420 ~~~~-~~~~~~~~~~~~ 435 (444)
+... ..+...+|++..
T Consensus 473 ~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 473 LSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHHheEEcccCCCC
Confidence 3344 566666666543
No 90
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=1.6e-31 Score=255.90 Aligned_cols=409 Identities=16% Similarity=0.185 Sum_probs=261.2
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhC---CCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHh
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALC---PGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (444)
++.+..+++.+.+.+..+.......+ ...++.+.+..+.+++.+...++..+++++.|.++||+|||+.+..+..+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 34466777776666555544422111 111222224567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc---CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 92 IIPLAILAYRR---SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 92 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
.++.++.++++ + ++.+.++|++.|++. |...+....+ .|..|+++|++..++.+....+|.+++..++...
T Consensus 87 ~i~~~~~~~~~~~~~---~~~~~~~R~~~G~~~-g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 87 IIGSILIAFAPSYNN---FWMLLIGRFLIGFGI-GGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred ccccccccccccccc---ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 8 999999999999954 6666789999 9999999999999999999999988887665432
Q ss_pred ---h---hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccccc---ccccCCCCCCCcCCcc---ccCCch
Q 013378 167 ---S---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETE---GVNQNESNSPVKIPVC---KKIPSI 234 (444)
Q Consensus 167 ---~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~ 234 (444)
+ ||..+.+..+++++. ++..+++||+|++...++|.++..+..++ .+..+++.++..++.+ +.+.+.
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASW 241 (451)
T ss_pred cccccccccccccccccccccc-cccccccccccceecccccccccccccccccccccccccccccccccccccccceee
Confidence 4 999999988886554 44557899999986555444433333222 1111111111111111 111123
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
++.++....++++.......+...+.......++..++.+..+.+... ......++...++. +.+..+.||+|||++
T Consensus 242 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~GRr~~ 318 (451)
T PF00083_consen 242 RDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSF--LATLILGLVNFLGT-LLAIFLIDRFGRRKL 318 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccc-ccccccccccccccc
Confidence 332211111122333333333333333223333333333444666651 11223334444444 444588999999999
Q ss_pred HHHHHHHHHHHHHHhh--h--ccCC-----chHHH-HHHHHhh-hhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHH
Q 013378 315 LSLGLFAACINMFICS--I--SWSA-----WVPYA-TTAFSVL-VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 383 (444)
Q Consensus 315 ~~~~~~~~~~~~~~~~--~--~~~~-----~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 383 (444)
+..+.....++.+.+. . ..+. ...+. ..+.... .....+..+.+..|.+|++.|+++.|+....+++++
T Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~ 398 (451)
T PF00083_consen 319 LIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGG 398 (451)
T ss_pred cccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccc
Confidence 9888888777776664 1 1111 11111 2222222 224567777889999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 013378 384 IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPASSKSQN 439 (444)
Q Consensus 384 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (444)
+++|.+...+.+.. +.. ..+.+.+.+.++..+..+...||++.+..+|
T Consensus 399 ~i~~~~~~~~~~~~-~~~-------~~~~i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 399 FIIPFLFPYLFNNL-GGW-------GVFLIFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred cccccccccccccc-ccc-------ccchhhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 99998888777664 211 1335555555666666666777776554443
No 91
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=4.3e-27 Score=208.31 Aligned_cols=409 Identities=13% Similarity=0.090 Sum_probs=268.4
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (444)
.+.|.+..+...+.++.|.+.+..-+...+.-+.+....+.+..+..+|.++++++.|++.||+|||+++...+++..++
T Consensus 48 ~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~ 127 (538)
T KOG0252|consen 48 MGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIIC 127 (538)
T ss_pred hhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHH
Confidence 34566666666666666655544432122223355566788999999999999999999999999999999999999999
Q ss_pred HHHHHhccCc----hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh---
Q 013378 95 LAILAYRRSI----SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 166 (444)
Q Consensus 95 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--- 166 (444)
++++++.... ...+++...|++.|+|. |..+|.+.+. +|...+++||...+..-+.++.|.+.|.+++-.+
T Consensus 128 t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGI-GGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~ 206 (538)
T KOG0252|consen 128 SALSGLSVGTTSPLGVMMTLCFFRFLLGIGI-GGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAI 206 (538)
T ss_pred HHHhccCCCCCCCcchhhHHHHHHHHhhccc-cCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHH
Confidence 9988876432 23588999999999955 8888999999 9999999999999998888888888776554331
Q ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC-CCCCccccccccccc-CCCCCCCcCCcc
Q 013378 167 ----------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD-LTRPIITEETEGVNQ-NESNSPVKIPVC 228 (444)
Q Consensus 167 ----------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (444)
-||..|.+.+++++ ..+.....+||+++.+...+ +.++..++..+..+. -++.++......
T Consensus 207 fe~~~~~~~~~~~ld~vWRl~~glg~vpa~-~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~ 285 (538)
T KOG0252|consen 207 FEKIFNGPSTYPHLDGVWRIIFGLGAVPAL-LVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVP 285 (538)
T ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHH-HHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCC
Confidence 49999999988864 44566778999987652111 101111111111000 000000011111
Q ss_pred ccCCchHHHHHHhccc--hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHH--------HHHHHHHHHHHHH
Q 013378 229 KKIPSIRDLICLLRSS--VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--------LMLIAGLAGTISQ 298 (444)
Q Consensus 229 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~ 298 (444)
.++++.+...+.+.++ +++.......|+.-.+++....+....++.. |+.+.+... ...+....+.+-.
T Consensus 286 ~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~~vPG 364 (538)
T KOG0252|consen 286 PPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCSTVPG 364 (538)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHccCCc
Confidence 1111222222333333 5666677777888788877777766666543 665544333 1111122222211
Q ss_pred HHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCC-c---hHHH--HHHHHhhhhhhhHHHHHHHhhccCCCcchhHH
Q 013378 299 LLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA-W---VPYA--TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 372 (444)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 372 (444)
..+...++|++||+++.+.++.++.+..+.++...+. . ...+ .+..-++..+.......+.+|.+|.+.|++..
T Consensus 365 yw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~h 444 (538)
T KOG0252|consen 365 YWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCH 444 (538)
T ss_pred eeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhh
Confidence 2333457899999999999999999998888877652 1 1111 12222333344445555679999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 373 GCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 373 g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
|+...++..|++++...+.++.++ ++.. .....-.+++.+.+.+++.+..+.++
T Consensus 445 GIsAA~GK~GAivg~~~F~~~t~~--~yp~-~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 445 GISAASGKAGAIVGAFGFLYLTDH--NYPP-NIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred hHHHHhccchHHHHHHHhhHhhhc--cCCc-cccchHHHHHHHHHHHHhHheeEEee
Confidence 999999999999999999988874 2111 12334467788888888887777766
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=4e-24 Score=184.71 Aligned_cols=329 Identities=16% Similarity=0.130 Sum_probs=259.5
Q ss_pred HHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccC
Q 013378 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (444)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 103 (444)
...+.|+++.+. +|.+.|...+|+++++..+...+.+++..+++.|+|.++.+..++++.+++.++-... +
T Consensus 28 itsvgPLL~~Ir--------~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~ 98 (395)
T COG2807 28 ITSVGPLLDEIR--------QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-G 98 (395)
T ss_pred hhhhhhhHHHHH--------HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-c
Confidence 355566666664 5668888999999999999999999999999999999999999999999999998887 5
Q ss_pred chhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH----Hhh-hhHHHHHHHHH
Q 013378 104 ISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA----RFL-STTSAFQAATI 177 (444)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~----~~l-~~~~~f~~~~~ 177 (444)
.+.++.+-.+.|. +.+..+...+.+ .+.+| |+-+..++++....++|..+++.+. ... +||.....-+.
T Consensus 99 ---~~~L~~gt~l~G~-gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 99 ---LPLLFLGTLLAGA-GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred ---HHHHHHHHHHHHh-hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 6889999999999 547887788888 78777 5689999999999999888775544 344 79999888888
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHH
Q 013378 178 VSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFS 257 (444)
Q Consensus 178 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (444)
++++.++.. +|...+.+..+ .+ ++.++..+ ++++|.-|.+.+...+.
T Consensus 174 ~allAl~~W---lPq~~r~~~~~-----------------------~~---~~~~~~~~----vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 174 LALLALLIW---LPQALREQAAS-----------------------IA---TKLVSVRK----VWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred HHHHHHHHH---hhhcccccccc-----------------------cc---cccccccc----cccCchhHHHHHHHHhh
Confidence 876554433 45432221110 00 00001111 57789999999999999
Q ss_pred HhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-chhHHHHHHHHHHHHHHHhhhccCCc
Q 013378 258 GLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-EAKLLSLGLFAACINMFICSISWSAW 336 (444)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (444)
++.++....|+|.++.|+ |+|.++.|.+.+...+.....+ +..+.+.+|.. +|+.......++.++.+.+.+.+...
T Consensus 221 S~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 221 SLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 999999999999999998 9999999999999999999997 66689998755 45666667777777777776666443
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHhhccCC-CcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 337 VPYATTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
..+..+++|++.+..+|...+.+....++ ++.++-.|+.+.++++-...||.+.|++.|.+++..
T Consensus 299 ~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 299 PILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred HHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 33336888999999999999988666554 555788889999999999999999999999985543
No 93
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.9e-25 Score=207.90 Aligned_cols=365 Identities=15% Similarity=0.131 Sum_probs=267.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHH-HHhhhhcccch
Q 013378 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYAL-RTLTAMVCEGS 124 (444)
Q Consensus 46 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~g~ 124 (444)
++.+..+++|+.++......+..|+.+.+.||+|.|++.+.+.++.+++.++.+|+++ +|.+++. -++.|+|. +.
T Consensus 76 f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~G~-~~ 151 (509)
T KOG2504|consen 76 FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGLGL-GL 151 (509)
T ss_pred hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhccc-hh
Confidence 3444466899999999999999999999999999999999999999999999999999 7766655 56778855 55
Q ss_pred hhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 013378 125 INCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 199 (444)
Q Consensus 125 ~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 199 (444)
.+.....+ ..+ .+|+|+.+.|+...+.++|.++-|.+... .|||+.+++.+.+.+-..+.....-|.+++..+.
T Consensus 152 ~~~paiviv~~Y-F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~ 230 (509)
T KOG2504|consen 152 IYLPAVVILGTY-FEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN 230 (509)
T ss_pred hhcchhhhhhhH-hHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch
Confidence 55555555 654 46899999999999999998887777665 4999999998888655554444444433332111
Q ss_pred CCCCC--C----------cccccc---cccccC---CCCCCCcCCccccC-CchHHHH----HHhccchhHHHHHHHHHH
Q 013378 200 DDLTR--P----------IITEET---EGVNQN---ESNSPVKIPVCKKI-PSIRDLI----CLLRSSVTLSQAAVVAFF 256 (444)
Q Consensus 200 ~~~~~--~----------~~~~~~---~~~~~~---~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~ 256 (444)
++++ . ..+... +....+ .+.++.++...+.. .+.+..+ ..+++++.++.+.+...+
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~ 309 (509)
T KOG2504|consen 231 -EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLF 309 (509)
T ss_pred -hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHH
Confidence 0000 0 000000 000000 00000000001000 0111111 246778999999999999
Q ss_pred HHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC--chhHHHHHHHHHHHHHHHhhhccC
Q 013378 257 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWS 334 (444)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 334 (444)
....+.....++|.|.++ .|++..+.+.++++.++..++++ +..|++.|+.. ++.+..++.+..+++.+..++.++
T Consensus 310 ~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~ 387 (509)
T KOG2504|consen 310 AYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT 387 (509)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999998889999999985 59999999999999999999998 55589999877 445566777777777777788888
Q ss_pred CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHH
Q 013378 335 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMC 413 (444)
Q Consensus 335 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (444)
.+.+.. ..++|+..+.........+.|.++.++-..+.|+...++.++..+||.+.|.+.|..++|...++..+...++
T Consensus 388 ~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~ 467 (509)
T KOG2504|consen 388 YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLL 467 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHH
Confidence 776666 6777888888888877889999999999999999999999999999999999999987788777655555555
Q ss_pred HHHHH
Q 013378 414 IGLAS 418 (444)
Q Consensus 414 ~~~~~ 418 (444)
.+.+.
T Consensus 468 s~~~~ 472 (509)
T KOG2504|consen 468 SAVLL 472 (509)
T ss_pred HHHHH
Confidence 54333
No 94
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=1.1e-23 Score=190.75 Aligned_cols=385 Identities=16% Similarity=0.135 Sum_probs=255.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHH
Q 013378 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (444)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (444)
.++++.+.+....++..+..+...|.+|.++++. .+++..++|.+.++..+...+.+|+.|.++||.|.||-+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~-------~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQV-------AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccc-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH
Confidence 3466777778888888999999999999999653 277889999999999999999999999999999976655
Q ss_pred HHHHHHhH---HHHHHHHhc----cCchhhHHHHHHHHhhhhcccchhhhhhhhhhccCChhhhhHHHHHHHHHHHhhhh
Q 013378 85 TLPLTLSI---IPLAILAYR----RSISFFYAYYALRTLTAMVCEGSINCLALAYADNISERQRASAFGILLGVLSASFV 157 (444)
Q Consensus 85 ~~~~~~~~---~~~~~~~~~----~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 157 (444)
+....+.. .......+. .| .+...+++-...|+.- ....|+..++.|... ++.+.-.|-..+..++|.+
T Consensus 77 l~~i~~l~~l~~pff~~v~~pll~~n--~~lg~iig~i~l~~~f-~~~~~~~Ea~~er~s-r~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 77 LWFIAILLLLFGPFFIYVFGPLLQSN--FWLGAIIGGIYLGLVF-NAGVPLSEAYAERVS-RRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp HHHHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTTTT-TTHHHHHHHHHHHHH-HHHSS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-cccchHHHHHHHHHH-HHhcCCcchHHHHhhHHHH
Confidence 44333222 222222222 23 0223334444445523 333356666633222 3455667778888889999
Q ss_pred hHHHhHHhh---hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCch
Q 013378 158 CGTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 234 (444)
Q Consensus 158 ~g~~l~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (444)
++..++|.+ +.+..||+....+++..++..+.-|+.+++.+..+ .+..++++.+.
T Consensus 153 i~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 210 (412)
T PF01306_consen 153 IASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD----------------------ALGAKKDKVSL 210 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST----------------------TSSS------H
T ss_pred HHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc----------------------ccccCCCCCcH
Confidence 999888875 45777887766654444443333333332221110 01111222244
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhcc---CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 311 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 311 (444)
++ ...++|+|++|.+.+........+..+...++.|..+.+ +.+.+..|++.+..-+..++. +..++++.+|+|.
T Consensus 211 ~~-~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~-m~~~p~li~rig~ 288 (412)
T PF01306_consen 211 KD-VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALM-MFFSPWLINRIGA 288 (412)
T ss_dssp HH-HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-H
T ss_pred HH-HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHH-HHHHHHHHHhcCh
Confidence 54 334778899999888777777777777666777776543 344566788888877777777 4777999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHH-HHHHHHHHHHhHHH
Q 013378 312 AKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLI 389 (444)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~~~ 389 (444)
|+.+.++..++.+-....++.++++.+.. -.+-++..........-++.+.+|++..++...+. +....++..+.+.+
T Consensus 289 k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~ 368 (412)
T PF01306_consen 289 KNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPL 368 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999887666 56778888888899999999999999989999885 67889999999999
Q ss_pred HHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHH-hcccCC
Q 013378 390 FSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL-MMSHTP 432 (444)
Q Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 432 (444)
.|.++|+. |.+. .+.+.+.+.+...+... .+++++
T Consensus 369 ~G~lyd~~-G~~~-------tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 369 AGYLYDRI-GFQH-------TYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHH-HHHH-------HHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHhhHhhc-CcHH-------HHHHHHHHHHHHHHHheeeecCCC
Confidence 99999998 3322 23444444444444444 444433
No 95
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.94 E-value=1.4e-23 Score=197.61 Aligned_cols=352 Identities=14% Similarity=0.147 Sum_probs=259.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHH-HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhh
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLA 129 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~ 129 (444)
...++..++..+..++..|+.|.++|+-|+||.++ ....+..+++..+.+.+... ++...+.-++.-+ +.+......
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~-~~~~~~l~iia~v-~~~~~~vfy 147 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQ-WWLALVLFIIANV-GYEASNVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcch-HHHHHHHHHHHHH-HHHHHHHHH
Confidence 45678899999999999999999999998766554 55555666777777753222 3333334444434 224444567
Q ss_pred hhh-hccCChhhh--------------------------hHHHHHHHHHHHhhhhhHHHhHHhh------------hhHH
Q 013378 130 LAY-ADNISERQR--------------------------ASAFGILLGVLSASFVCGTLAARFL------------STTS 170 (444)
Q Consensus 130 ~~~-~~~~~~~~r--------------------------~~~~~~~~~~~~lg~~~g~~l~~~l------------~~~~ 170 (444)
.++ .|..+++++ ++..+.-.....+|.++.-++.-.+ +-|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 788 999988888 7888777777777777654443321 2388
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHH
Q 013378 171 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA 250 (444)
Q Consensus 171 ~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (444)
.+.+.++..++..+...+.+||.|+.+..+.. .+..+.....+++.++..++.|.+...
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~---------------------~~~~~~g~~~l~~t~k~~~~~~~~~~f 286 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG---------------------SSYLRFGFKRLWRTFKEIRKLRQLFLF 286 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc---------------------hhHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 88888888778888888889988763222100 000111112345556677888999999
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch--hHHHHHHHHHHHHHHH
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFI 328 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~ 328 (444)
++..+++.-+...+......|.++.+|++..+...+.....+.++++. +..+++.||+|.| +++..+.....+..+.
T Consensus 287 Lia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~ 365 (477)
T PF11700_consen 287 LIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPLY 365 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998999999999997 5558999999998 7777776666433333
Q ss_pred hhh--------ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 013378 329 CSI--------SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 399 (444)
Q Consensus 329 ~~~--------~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 399 (444)
-.+ .++.+.+++ .++.|+..+..++...++.++..|+++.+..+|++...+...+.+||.+.|.+.+.+++
T Consensus 366 g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~ 445 (477)
T PF11700_consen 366 GLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS 445 (477)
T ss_pred HHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222 345666666 67789999999999999999999999999999999999999999999999999999855
Q ss_pred cCCCcccchhHHHHHHHHHHHHHHHHHhcccCCC
Q 013378 400 KGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 433 (444)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (444)
.+.++ ....++.++++++....+.++.
T Consensus 446 ~r~g~-------~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 446 QRYGF-------LFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred chhHH-------HHHHHHHHHHHHHHhhccchhh
Confidence 55433 5555566666666665555443
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=1.1e-24 Score=211.92 Aligned_cols=336 Identities=18% Similarity=0.123 Sum_probs=230.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhh
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (444)
..+.....+..+++.+|.+++++++|+++||+|||++++.+.++..++.+..++++| ++.+++.|+++|++. +...
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~~~-~~~~ 189 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGFFG-SGPL 189 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHhhc-cchh
Confidence 445577889999999999999999999999999999999999999999999999999 999999999999966 4555
Q ss_pred hhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Q 013378 127 CLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT 203 (444)
Q Consensus 127 ~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 203 (444)
.....+ .|+.++++|+.+..+ ......+..++|.+++++ +||+.+++..++.++..++ ++..||++++...+++.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~ 267 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRI 267 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCch
Confidence 678888 999999999999999 655556666666666664 7999999999887665554 66677999986655444
Q ss_pred CCcccccccccc---cCCCCCC------CcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhh
Q 013378 204 RPIITEETEGVN---QNESNSP------VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA 274 (444)
Q Consensus 204 ~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (444)
++..+..++..+ .+.+.++ ..+..+......+..+..+++.+++....+...+..+.......-++... .
T Consensus 268 ~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~-~ 346 (521)
T KOG0255|consen 268 DEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV-S 346 (521)
T ss_pred HHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh-h
Confidence 333222222111 0010000 00000000000001122244555444444444444433322222233222 2
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCch---HHH-HHHHHhhhhh
Q 013378 275 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV---PYA-TTAFSVLVVF 350 (444)
Q Consensus 275 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~g~~~~~ 350 (444)
.+|.+.. ......+....... ...+...|+.|||.....+..+..++++...+...... ... ..+...+.+.
T Consensus 347 ~lg~~~~---~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
T KOG0255|consen 347 GLGGNIY---LNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGS 422 (521)
T ss_pred hcCchHH---HHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Confidence 2344432 33344444555554 55478899999999999999999999988887765332 333 3344556666
Q ss_pred hhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 351 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
.+.....+..|.+|+..|+.+.+..+....++.+++|.+.-..
T Consensus 423 ~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 423 AFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777788999999999999999999999999999999776444
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.93 E-value=4.9e-23 Score=197.41 Aligned_cols=351 Identities=11% Similarity=0.049 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc----ccCc-hHHHHHHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGR-KAMLTLPLT 89 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-r~~l~~~~~ 89 (444)
++.+...+..+...+.++.|..+. .++++.++|.+..+..+..++..|+.|.++| |+|| |+.++.+..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v-------~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i 85 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDV-------VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTL 85 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhH
Confidence 455556666777778788777554 3677899999999999999999999999999 5698 556667877
Q ss_pred HhHHHHHHHHhccCc---hhhHHHHHHHHhhhhcccchhhhhhhhh-hccC-ChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 90 LSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAY-ADNI-SERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
..+++..++...++. ..+..+++..++.++ +.........++ .|.. +++||.+..++.....++|..+.+.+..
T Consensus 86 ~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 86 ANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM-TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH-HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666544421 113445555556566 334555567788 9988 6899999999877777776555443322
Q ss_pred h----h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCc
Q 013378 165 F----L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 233 (444)
Q Consensus 165 ~----l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (444)
. + +|+....+.+++..+..+..++..||.++.++.+ ..++++.+
T Consensus 165 ~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~-------------------------~~~~~~~~ 219 (473)
T PRK10429 165 PFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV-------------------------SAEGSHLT 219 (473)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc-------------------------cccccCCC
Confidence 1 1 3555555666555554555555566653221110 00112235
Q ss_pred hHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh
Q 013378 234 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 313 (444)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (444)
.++.++.+++||.++..+...++..........+.+.|.+...+ +....+.+....++..+++. ...+++.||+|+|+
T Consensus 220 ~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gkk~ 297 (473)
T PRK10429 220 LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHH
Confidence 67777778899998888888877777666666666666655544 55556666666667777776 55589999999999
Q ss_pred HHHHHHHHHHHHHHHhhh---c-c-CCchHHH-HHHHHhhhhhhhHHHHHHHhhccC-------CCcchhHHHHHHHHHH
Q 013378 314 LLSLGLFAACINMFICSI---S-W-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISS 380 (444)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ 380 (444)
.+..+..+..++.+.+.. . + +.+..++ ..+.+++.+...+..++++.|..| .+..|..+|..+....
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K 377 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK 377 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH
Confidence 988777766655444332 1 2 2333333 455678888888888889988866 3334669999999999
Q ss_pred HHHHHhHHHHHHHHHhhhhcC
Q 013378 381 FANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 381 ~g~~~~~~~~g~l~~~~~~~~ 401 (444)
++..+++.+.|.+.+.. +++
T Consensus 378 ~~~al~~~i~g~~l~~~-Gy~ 397 (473)
T PRK10429 378 GGSAFAAFFIGVVLGLI-GYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHHc-CCC
Confidence 99999999999999877 553
No 98
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=8.9e-24 Score=181.80 Aligned_cols=373 Identities=15% Similarity=0.050 Sum_probs=247.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (444)
...+.+..+..++......+..+++..+|..+|++|||+.+.+......+...+.+.++| +..+.+.|.+.|+|.+|
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~g~gg 182 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGFGVGG 182 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhccCCC
Confidence 444677788999999999999999999999999999999999999999999999999999 99999999999996655
Q ss_pred hhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013378 124 SINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 198 (444)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 198 (444)
.|...++ .|..|..+|..-+-.. ..+.+|.+....+.-. +||||.......+. ..+....+++||+|+..-
T Consensus 183 --~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl-~~~a~f~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 183 --LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPL-MFAARFLVWVYESPRFYL 258 (528)
T ss_pred --ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHH-HHHHHHHhhcccCcchhh
Confidence 5778888 9999998888776666 8888888887666543 59999888887654 444455678999998644
Q ss_pred CCCCCCCccc---cccc---------------ccccCCCCCCC----cCCccccCCchHHHHHHhccchhHHHHHHHHHH
Q 013378 199 DDDLTRPIIT---EETE---------------GVNQNESNSPV----KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFF 256 (444)
Q Consensus 199 ~~~~~~~~~~---~~~~---------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (444)
.+++.++... +..+ .+++++++.+. .+..++......+.+..-+++.. +.+....+.
T Consensus 259 ~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrktt-lllw~iwfg 337 (528)
T KOG0253|consen 259 AKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTT-LLLWRIWFG 337 (528)
T ss_pred hcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHH-HHHHHHHHh
Confidence 3322222111 1000 00111111110 11111222233332221122222 222223333
Q ss_pred HHhhhcchhH-----------------HHHHHHhhccC--cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHH
Q 013378 257 SGLSEGGMQA-----------------SFLYFLKAQFH--FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 317 (444)
Q Consensus 257 ~~~~~~~~~~-----------------~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (444)
..+.+++... ..|.+.+...+ .+..+.-.=..+..+....+. ++.+++.||+|||+.+..
T Consensus 338 nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGl-LIt~~iverlGRKkTMal 416 (528)
T KOG0253|consen 338 NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGL-LITGVIVERLGRKKTMAL 416 (528)
T ss_pred hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHHH
Confidence 3333333221 22333322111 111111111234456666775 666899999999999999
Q ss_pred HHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 318 GLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+++++++..+++....+...... .+..-++..+.+...+.+..|.+|+..|+++.|.++.+..+|+++.|.++ ...+.
T Consensus 417 ~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~ 495 (528)
T KOG0253|consen 417 SLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL 495 (528)
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc
Confidence 99999998887777665444333 45556677778888899999999999999999999999999999999887 33332
Q ss_pred hhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 013378 397 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPASS 435 (444)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (444)
+.. ....+.+.+++++.+...+.+-+++.+
T Consensus 496 --s~s-------l~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 496 --STS-------LPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred --cee-------ehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 111 144666777777777777777666543
No 99
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.93 E-value=6e-25 Score=215.31 Aligned_cols=297 Identities=13% Similarity=0.162 Sum_probs=214.0
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHH
Q 013378 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (444)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 95 (444)
..+...+..+...+.++.+. ++++++..+.|++.+.+.++++++.++.|+++||+|||+.+.++.++.++++
T Consensus 41 ~~~~~~~~~g~~~~~l~~ie--------k~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIE--------RRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhhh--------hhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 33444444566667777664 4456777888999999999999999999999999999999999999999999
Q ss_pred HHHHhcc----------------------------C--------------------chhhHHHHHHHHhhhhcccchhhh
Q 013378 96 AILAYRR----------------------------S--------------------ISFFYAYYALRTLTAMVCEGSINC 127 (444)
Q Consensus 96 ~~~~~~~----------------------------~--------------------~~~~~~l~~~r~l~G~~~~g~~~~ 127 (444)
+++++.+ + ...+..++++|+++|+|. +...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~-~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA-TPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC-Ccchh
Confidence 9988763 0 002567889999999955 77778
Q ss_pred hhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--------------------------hhHHHHHHHHHHHH
Q 013378 128 LALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 180 (444)
Q Consensus 128 ~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--------------------------~~~~~f~~~~~~~~ 180 (444)
...++ .|++|+++|++.++++.....+|..+|+++++.+ +||..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 89999 9999999999999999999999999999888753 16777888887766
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhh
Q 013378 181 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 260 (444)
Q Consensus 181 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (444)
+..+. ++.+|++.++...+++.+...+.. .++.++ +. +....+...+..+..+.++++|.++...+..++....
T Consensus 272 l~~v~-l~~~p~~lp~~~~~~~~~~~~~~~---~~~~~~-~~-~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 272 LTSIP-FFFFPKALPKEGKRVNVDVHETEK---LEKSED-KS-RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHH-HHhCccccCCcccccchhhhhhhc---cccccc-cc-chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 65544 445666543221111100000000 000000 00 0000011112334456688999999999999999999
Q ss_pred hcchhHHHHHHHhhccCcCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhhC--chhHHHHHHHHHHHHHHH
Q 013378 261 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI 328 (444)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 328 (444)
..++..++|.|+++++|+++.+++.+.....+. .+++ .+++|+++||++ .|+.+..+.++..++.+.
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG-~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLG-YLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHH-HhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877764 4455 477799999987 456666666666665443
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=1.9e-22 Score=192.21 Aligned_cols=340 Identities=14% Similarity=0.072 Sum_probs=224.8
Q ss_pred HHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc----cCch-HHHHHHHHHhHHHH
Q 013378 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRK-AMLTLPLTLSIIPL 95 (444)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~~~~ 95 (444)
.+........++.|.. ++.+++..++|.+.++..+..++..|+.|.++|| +||| +.++.+....+++.
T Consensus 22 ~~~~~~~~~~l~~~~t-------~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 22 NLVWQTVMLFLAYFYT-------DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred hHHHHHHHHHHHHHHH-------HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHH
Confidence 3334444555565553 3457888999999999999999999999999999 7775 55656777777777
Q ss_pred HHHHhccCc---hhhHHHHHHHHhhhhcccchhhhhhhhh-hccC-ChhhhhHHHHHHHHHHHhhhhhHHHhH----Hh-
Q 013378 96 AILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAY-ADNI-SERQRASAFGILLGVLSASFVCGTLAA----RF- 165 (444)
Q Consensus 96 ~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~----~~- 165 (444)
.+....++. ...+.+++...+.+.+. ........++ +|+. +++||++..++......+|..+++.+. ..
T Consensus 95 ~l~f~~p~~~~~~~~~~~~~~~~l~~~~~-t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 95 LLTFYTPDFGATGKIIYACVTYILLSLVY-TAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHH-HhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665555531 11345555665666533 3344456678 8887 568899998888888888777765432 22
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHH
Q 013378 166 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 239 (444)
Q Consensus 166 ------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (444)
.+|+..+.+.+++..+..+..++..+|.++++++ ++.+.++.++
T Consensus 174 ~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~------------------------------~~~~~~~~~~ 223 (444)
T PRK09669 174 GKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD------------------------------NSSSVWKDLK 223 (444)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc------------------------------CCCCHHHHHH
Confidence 2567777777766655555555555553221100 0113455566
Q ss_pred HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 240 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
.+++||.++.++...++............+.|.++..+ +++..+.+.....+..+++. .+.+++.||+|+|+....+.
T Consensus 224 ~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~~~~~~ 301 (444)
T PRK09669 224 LLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRAFKWTI 301 (444)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHH
Confidence 68889998887777666655554444444445554443 23333444444445555654 55589999999999888777
Q ss_pred HHHHHHHHHh-hhc-cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccC-------CCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 320 FAACINMFIC-SIS-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 320 ~~~~~~~~~~-~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
....+....+ ... ++.+..+. .++.+++.+...+..++++.|..+ ++..|..+|..+....+|..+|+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 302 VAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 6655433322 222 23333333 566788888889999999988875 2334778899999999999999999
Q ss_pred HHHHHHhhhhcC
Q 013378 390 FSPLTALFLSKG 401 (444)
Q Consensus 390 ~g~l~~~~~~~~ 401 (444)
.|.+++.. +++
T Consensus 382 ~g~ll~~~-Gy~ 392 (444)
T PRK09669 382 VGWILAWV-DYV 392 (444)
T ss_pred HHHHHHHc-CCC
Confidence 99999987 654
No 101
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=7.8e-23 Score=196.30 Aligned_cols=369 Identities=11% Similarity=0.027 Sum_probs=222.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc-cCchHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~ 85 (444)
++.++.++...+...++.....+.++.|+.+.+ +.+..+.+++.+.+........++.|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l-------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQL-------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 345778888888899998888889999986654 3444555666776666656666789999999 59999999
Q ss_pred HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChh--hhhHHHHHHHHHHHhhhhhHHHh
Q 013378 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISER--QRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~--~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
.+.++.+++..+++++++. .+.+++.|+++|++ .|...+...++ .|++|++ +|.++++++..+.++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gig-~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAVG-NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHh-hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999887531 56677889999994 47666777888 9999754 35568889999999999999998
Q ss_pred HHhh----hhHHHHHHHHHHHHHHH---HHHHHhccCCCCCCCCCCCCCCcccccc---------cccccCCCCCCCcCC
Q 013378 163 ARFL----STTSAFQAATIVSMLAA---AYMRVFLKDDVPNDDDDDLTRPIITEET---------EGVNQNESNSPVKIP 226 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 226 (444)
++++ |||+.|++.++...+.. +.....++|..++.++ ++.|....... .......+.+. .+.
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 247 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDF-EPINYRKLLLTIVGVVALIAIATWLLHNQEI-ARM 247 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCc-cccchhhHHHHHHHHHHHHHHHHHHHhcchH-HHH
Confidence 8874 89999998875433322 2223334443211110 00110000000 00000000000 000
Q ss_pred cccc------CCchHHH--HHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHh----hc-----cCcCchhHHHHHHH
Q 013378 227 VCKK------IPSIRDL--ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK----AQ-----FHFNKNQFADLMLI 289 (444)
Q Consensus 227 ~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~g~~~~~~~~~~~~ 289 (444)
.... ....++. .+... +++.+..+. .++....+.......+.++. +. .|+. ...+++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~ 324 (500)
T PRK09584 248 ALGVVALGIVVIFGKEAFAMKGAA-RRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQAL 324 (500)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHH-HHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHH
Confidence 0000 0000000 00011 122222222 22223333333444444422 21 1211 124556666
Q ss_pred HHHHHHHHHHHH---HHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC---------C-chHHHHHHHHhhhhhhhHHHH
Q 013378 290 AGLAGTISQLLF---MPLLAPILGEAKLLSLGLFAACINMFICSISWS---------A-WVPYATTAFSVLVVFATPSFR 356 (444)
Q Consensus 290 ~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~g~~~~~~~~~~~ 356 (444)
..+..++...+. .+++.||.+..+.+.+|.++.+++++.+....+ . |.....++.+++.....|...
T Consensus 325 n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~ 404 (500)
T PRK09584 325 NPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGL 404 (500)
T ss_pred hHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHH
Confidence 665555554333 134455555667788889999998887765533 2 333446778999999999999
Q ss_pred HHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHH
Q 013378 357 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 390 (444)
Q Consensus 357 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 390 (444)
+++.+..|++.||+++|.......+|..++..+.
T Consensus 405 s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 405 AMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999966655554444444433
No 102
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=9e-23 Score=185.57 Aligned_cols=370 Identities=10% Similarity=0.022 Sum_probs=237.8
Q ss_pred chhhHHHH-HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccc
Q 013378 45 ECSLAIYL-SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (444)
Q Consensus 45 ~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (444)
+.+++..+ .|.+.++++.+++++.++.|.++||+|.|+++..+.+.+++.+++.+++++ +..+.+.|++.|+ +.|
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGv-aEA 130 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSV-TMA 130 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHH
Confidence 45677777 899999999999999999999999999999999999999999999999999 9999999999999 557
Q ss_pred hhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh---hhHHHHH---HHHHHHHHHHHHHHHhccCCCCC
Q 013378 124 SINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQ---AATIVSMLAAAYMRVFLKDDVPN 196 (444)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l---~~~~~f~---~~~~~~~~~~~~~~~~~~e~~~~ 196 (444)
... +...+ ..++|++||+++.++...+..+|.++++++++.+ +||+-+. +.... ....++..+++|.+++.
T Consensus 131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s-~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVF-MTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH-HHHHHHHHHhCCCCchh
Confidence 776 78888 9999999999999999999999999998888764 7876443 33322 33444555678855442
Q ss_pred CC--CCCCCCCcccccccccccCCCCCCCcCCccccCC---chHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHH
Q 013378 197 DD--DDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP---SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYF 271 (444)
Q Consensus 197 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (444)
.- ++++.+.....+.+..++++..++.+..+.+... .+..-++...+++.++...+=..+...++....++....
T Consensus 209 l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~L 288 (511)
T TIGR00806 209 LFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTL 288 (511)
T ss_pred hhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHH
Confidence 11 1100000000000000000000000000000001 122223334566666655555555555555555555544
Q ss_pred HhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch--hHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhh
Q 013378 272 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLV 348 (444)
Q Consensus 272 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 348 (444)
-++..+-.+...|..-++..+.+.+.. +..|++-.++.+. ..+.+..++.+..++++...++.|..+. .++++...
T Consensus 289 W~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y 367 (511)
T TIGR00806 289 WGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIY 367 (511)
T ss_pred HHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHH
Confidence 433322111234555666666677776 4557775555432 2334444555566777788888998888 56667788
Q ss_pred hhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh---hhcCCCcccchhHHHHHHHHHHHHHHH
Q 013378 349 VFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF---LSKGAPFNFPGFSIMCIGLASMVAFIQ 424 (444)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (444)
....+....-+.+....+.-|..+|+++.+.-+-+.+-..+. .|.. .+....|...+..|.+.+.+.++....
T Consensus 368 ~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV---vd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~~ 443 (511)
T TIGR00806 368 QFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV---SDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAGL 443 (511)
T ss_pred HHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE---EcccccCCCceeEEEehhhHHHHHHHHHHHHHHH
Confidence 888888888888888888889999998888776665554332 2221 022233344455666666665555443
No 103
>PRK09848 glucuronide transporter; Provisional
Probab=99.93 E-value=1.5e-22 Score=193.23 Aligned_cols=346 Identities=12% Similarity=0.005 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc----CchHHH-HHHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY----GRKAML-TLPLT 89 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grr~~l-~~~~~ 89 (444)
...+...+..++..+.++.|.++. .+++..++|.+.++..+..++..++.|+++||. ||||.. ..+.+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~-------~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDV-------AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 455566777777778887777554 366778999999999999999999999999996 777654 55555
Q ss_pred HhHHHHHHHHhcc-Cc---hhhHHHHHHHHhhhhcccchhhhhhhhh-hccC-ChhhhhHHHHHHHHH-----HHhhhhh
Q 013378 90 LSIIPLAILAYRR-SI---SFFYAYYALRTLTAMVCEGSINCLALAY-ADNI-SERQRASAFGILLGV-----LSASFVC 158 (444)
Q Consensus 90 ~~~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~-~~~~r~~~~~~~~~~-----~~lg~~~ 158 (444)
...+...+....+ .. ...+..+....+.++ +.+...+...++ .+.. +++||.+..++-..+ ..++..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ 166 (448)
T PRK09848 88 PLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL-CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLI 166 (448)
T ss_pred HHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH-HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4544444432112 10 112333444555666 334555556666 5555 457888877665543 2345566
Q ss_pred HHHhHHhhh------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCC
Q 013378 159 GTLAARFLS------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 232 (444)
Q Consensus 159 g~~l~~~l~------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (444)
+|.++...+ |.....+.+++..+..+......||+++.+.+ ++
T Consensus 167 ~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-------------------------------~~ 215 (448)
T PRK09848 167 GPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-------------------------------QP 215 (448)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-------------------------------CC
Confidence 676665432 11111222223223333333344554221110 11
Q ss_pred chHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch
Q 013378 233 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 312 (444)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 312 (444)
+.++.++.++++|.++...+..++............|.|.++.+|.++...+.......+..+++. ...+++.||+++|
T Consensus 216 ~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~r~g~~ 294 (448)
T PRK09848 216 SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMVARIGKK 294 (448)
T ss_pred CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcH
Confidence 345556678899999888888888877777777778888888888776654444443345556665 5558999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcc--CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCC-------cchhHHHHHHHHHHHH
Q 013378 313 KLLSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN-------EQGKAQGCISGISSFA 382 (444)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~g 382 (444)
+.+..+..+..++.+.+.+.+ +.+.... ..+.+++.+...+..+++..|..|.+ ++|...|+.+....+|
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 999999888887777666544 2333333 45678888888899999988887654 3599999999999999
Q ss_pred HHHhHHHHHHHHHhhhhcC
Q 013378 383 NIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 383 ~~~~~~~~g~l~~~~~~~~ 401 (444)
..+++.+.|.+.+.. +++
T Consensus 375 ~aig~~i~g~~l~~~-G~~ 392 (448)
T PRK09848 375 QAIGGSIPAFILGLS-GYI 392 (448)
T ss_pred HHHHHHHHHHHHHHc-CCC
Confidence 999999999999876 543
No 104
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=3e-23 Score=183.50 Aligned_cols=375 Identities=13% Similarity=0.089 Sum_probs=274.7
Q ss_pred HhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHH-HHHHHhHHHHHHHHhccC
Q 013378 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRS 103 (444)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~ 103 (444)
-+...++|.|.++....+.-+...+....|...++..+..++.+|..|.++|+.|+||..+ ....+..++..+..++++
T Consensus 32 ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~ 111 (438)
T COG2270 32 IVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP 111 (438)
T ss_pred eeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC
Confidence 3445567888777654333233444467799999999999999999999999999766554 555556667777777766
Q ss_pred chhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH------H------------
Q 013378 104 ISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA------R------------ 164 (444)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~------~------------ 164 (444)
...++..++.-.+..++. ........++ .|..++++-++..++-.....+|..+--+.. +
T Consensus 112 ~s~~~~~l~~~il~~i~~-~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l 190 (438)
T COG2270 112 GSYLLLLLLFLILASIGF-EFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGL 190 (438)
T ss_pred CchHHHHHHHHHHHHHhc-chhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeecc
Confidence 332566667777777744 4444568888 9999988877776554444444444432211 1
Q ss_pred ----hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHH
Q 013378 165 ----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 240 (444)
Q Consensus 165 ----~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (444)
...-|..+.+.++..++..+.+++..||.++...+. .+...+..+.+++.++.
T Consensus 191 ~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-----------------------~~~l~~g~k~L~~t~k~ 247 (438)
T COG2270 191 PPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-----------------------PTALRNGFKELKSTFKE 247 (438)
T ss_pred CccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-----------------------hHHHHHHHHHHHHHHHH
Confidence 012378888888887777778877777766432110 01111111244556677
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
.++++.+...++..+++.=+..+.......|....+|++..+...+.....+.++++. ++.|++.||+|.|+++..+++
T Consensus 248 i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 248 IRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred HhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHH
Confidence 8888999999999999998888899999999998899999999999999999999997 566899999999999999988
Q ss_pred HHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Q 013378 321 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 399 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 399 (444)
+..+..+...+.......+. ..++|...+..+....++..+.+|+++.++.+|+++..+.....+||.+.+.+.+.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 88777766666555444444 57889999999999999999999999999999999999999999999999999998855
Q ss_pred cCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 400 KGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
.+..+ ....++..++.+...+.+.+
T Consensus 407 ~r~g~-------~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 SRAGV-------LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhhHH-------HHHHHHHHhhHhhEEeecCC
Confidence 44322 44445555555555555444
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.92 E-value=2.2e-22 Score=190.83 Aligned_cols=326 Identities=15% Similarity=0.123 Sum_probs=248.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhcccccc----ccCchH-HHHHHHHHhHHHHHHHHhc-c-Cch---hhHHHHHH
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKA-MLTLPLTLSIIPLAILAYR-R-SIS---FFYAYYAL 113 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-~~~---~~~~l~~~ 113 (444)
+..++++...|++..+..+..++..|+.|.++| |+|||| .++.+....+++..++... + +.. ....+.+.
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~ 109 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVF 109 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHH
Confidence 334777789999999999999999999999999 799766 4556778888888777766 4 111 13345666
Q ss_pred HHhhhhcccchhhhhhhhh-hccCC-hhhhhHHHHHHHHHHHhhhhhHHHhHHh----h-------hhHHHHHHHHHHHH
Q 013378 114 RTLTAMVCEGSINCLALAY-ADNIS-ERQRASAFGILLGVLSASFVCGTLAARF----L-------STTSAFQAATIVSM 180 (444)
Q Consensus 114 r~l~G~~~~g~~~~~~~~~-~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l-------~~~~~f~~~~~~~~ 180 (444)
.++..++. ........++ .|..+ ++||.+..+.-+....+|.++...+... + +|++...+.+++.+
T Consensus 110 ~~l~~~~~-t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 110 YILFDIAY-TFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHhh-hhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 66667733 5555567788 99997 5799999999988888888644333322 2 58888888888887
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhh
Q 013378 181 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 260 (444)
Q Consensus 181 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (444)
+..++..+..||++++.++ ++++.+.++.++..++||.++.+....++....
T Consensus 189 v~~~i~~~~~ke~~~~~~~----------------------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~ 240 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEVTE----------------------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLA 240 (428)
T ss_pred HHhhhhhheeeeccccccc----------------------------cccccccccchhhhcccchHHHHHHHHHHHHhh
Confidence 8777788888882211111 111224455666788999999989998888888
Q ss_pred hcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc--CCchH
Q 013378 261 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVP 338 (444)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 338 (444)
........+.|.++..|.+ ...+.......+...++. .+.++++||+|+|+.+..+..+.+++.+.+.+.+ +.+..
T Consensus 241 ~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 241 FALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred hhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 8888888888888887776 455676777778878886 4558999999999999999999998888777765 55555
Q ss_pred HH-HHHHHhhhhhhhHHHHHHHhhccCC-------CcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 339 YA-TTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 339 ~~-~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
++ ..+.|++.+......+++..|..+. ++.|...|+.+....++..+++.+.|.+.+.. +++
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~-Gy~ 388 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV-GYD 388 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh-CcC
Confidence 55 6677899998889999999888763 44599999999999999999999999999876 554
No 106
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=9e-22 Score=183.09 Aligned_cols=373 Identities=32% Similarity=0.540 Sum_probs=274.8
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhh-HHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSL-AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
...+....++..++.++..+..........|...++.+. +....+.-.....+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 344556667777777777766655554443322222221 1122233333447888999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhh-cccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAM-VCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
....+......+.. +|.++ +.|+ |+-+.......++ +|...+++|...+++.+.....+..++|.+++.+
T Consensus 100 ~~~~l~~~~~~~~~----~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~ 171 (463)
T KOG2816|consen 100 FGTILPALCLLFQG----YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL 171 (463)
T ss_pred HHHHHhHHHHHHHH----HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99988888777766 23333 3333 2224566678899 9999999999999999999999999999998875
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhc
Q 013378 167 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 242 (444)
Q Consensus 167 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (444)
+.-.+|.+..+..++..+..++++||+..++++++ ++. .+..+............+. .....
T Consensus 172 ~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~~-~~~~~ 237 (463)
T KOG2816|consen 172 VKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATL------------RELTPGSLDSSHVADAFQS-LTKVG 237 (463)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccc------------cccCCCcccchhhhhhhhh-hcccC
Confidence 66788999999988888999999999876655432 000 0000000000000001111 11133
Q ss_pred cchhHHHHHHHHHHHHhhhcc-hhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGG-MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
.+|..+.+....++....... .....+.|++..++++..+.+.+.+..+....+++.+..+.+.+.++.++.+..|+..
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 455555555555555444433 2324577889999999999999999999999999988878999999999999999999
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 322 ACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
-.+....+++.++.|..+...+.........|...+..+..++++++|+++++.+.+..+...++|.+.+.++..+....
T Consensus 318 ~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~ 397 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDL 397 (463)
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999998888888888999999999999999999999999999999999999999999998875554
Q ss_pred CCc
Q 013378 402 APF 404 (444)
Q Consensus 402 ~~~ 404 (444)
.++
T Consensus 398 ~~~ 400 (463)
T KOG2816|consen 398 PGF 400 (463)
T ss_pred ccc
Confidence 443
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=3.9e-22 Score=189.85 Aligned_cols=391 Identities=12% Similarity=0.037 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccC-----chHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT 85 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~ 85 (444)
.++....+..++. ++....++.++++ +.+++..+.+...+...++..+-.+ +|+++||++ ||+.++
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~-------~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~ 99 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTD-------DLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLV 99 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHH
Confidence 3444455666666 5555555555543 3366678888889999999998555 999999997 777777
Q ss_pred HHHHHhH-HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHH---HHHHHHHHHhhhhhHH
Q 013378 86 LPLTLSI-IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASA---FGILLGVLSASFVCGT 160 (444)
Q Consensus 86 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~---~~~~~~~~~lg~~~g~ 160 (444)
++.++.. +.....+..++. .....+..++.++ +.+...++..++ .|..+ |++... .+......++|.++|+
T Consensus 100 ~~~~l~~~~~~~~l~~~~~~--~~~~~~~~~l~~~-~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 100 LSGLLGSAILYGLLPGKVSS--AKVAAAFIFLAAL-AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHhcccccch--HHHHHHHHHHHHH-HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 7776663 443333333441 3344447888888 446777789999 99988 544433 3333333457888888
Q ss_pred HhHHh----hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCc-cccCCchH
Q 013378 161 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPV-CKKIPSIR 235 (444)
Q Consensus 161 ~l~~~----l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (444)
.+++. ++||..|++.+.+.++. ....+++||++....++.+++. . .......... ...++..+
T Consensus 176 ~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~~~~ 243 (468)
T TIGR00788 176 LLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYL-----E------MNMALLTLGVLANVKVQIL 243 (468)
T ss_pred HHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccc-----h------hhhhhhhhhHHHHHHHHHH
Confidence 77776 48999999988876555 4445667886421111000000 0 0000000000 00011223
Q ss_pred HHHHHhccchhHHHHHHHHHH-HHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH
Q 013378 236 DLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
+..+ ..++|.++...+..++ +..........+ .+.++..|+++.+.|......+++.+++. ...+++.+|++.|++
T Consensus 244 ~l~~-~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~~ 320 (468)
T TIGR00788 244 GLRG-AIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRLL 320 (468)
T ss_pred HHHH-HHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHHH
Confidence 3333 4567777775665555 332222211111 13335679999999999999999999987 445788899999999
Q ss_pred HHHHHHHHHHHHHHhhhc----------cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHH
Q 013378 315 LSLGLFAACINMFICSIS----------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 383 (444)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 383 (444)
+.++.++.+++.+..... ++.+.... ..+.+++.+........++++..|++.+|+.+++.+++.++|.
T Consensus 321 l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~ 400 (468)
T TIGR00788 321 FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGS 400 (468)
T ss_pred HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHH
Confidence 999988888776543211 12222222 4566778888888889999999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 384 IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 384 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
.+++.++|.+.+..+.....+.......+++.+..++...+...++
T Consensus 401 ~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP 446 (468)
T TIGR00788 401 SVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLP 446 (468)
T ss_pred HHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999998742222221122233444455555555555555
No 108
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=1.8e-21 Score=184.40 Aligned_cols=354 Identities=13% Similarity=0.061 Sum_probs=236.4
Q ss_pred HhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc
Q 013378 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (444)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (444)
......++.+..+. |.++ ...|+.+...++..++.++.|+++|.+|||.+++.+.++..+|.++++-++|
T Consensus 61 ~~~a~~l~~I~~di---G~~~------~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~- 130 (599)
T PF06609_consen 61 VLPASILPYINADI---GGSD------NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN- 130 (599)
T ss_pred hccHHHHHHHHHhc---CCCc------cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc-
Confidence 33345566555444 3332 3367788899999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHH
Q 013378 105 SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVS 179 (444)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~ 179 (444)
...++++..+.|+|. |... ..... +|..|.|.|....++.....-.....+|.++..+ +|||.|++..+..
T Consensus 131 --~~~~iag~~l~Gvga-G~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 131 --MNTFIAGMVLYGVGA-GVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred --HHHHHHHHHHHHHhh-HHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 999999999999954 5554 45666 9999999998888777766555555677776554 7999999998877
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCC---CCcccccc-----------------cc-cccCCCCCC----------------
Q 013378 180 MLAAAYMRVFLKDDVPNDDDDDLT---RPIITEET-----------------EG-VNQNESNSP---------------- 222 (444)
Q Consensus 180 ~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~~-----------------~~-~~~~~~~~~---------------- 222 (444)
.+.++...++...+++.+.+.++. ++..+-+- .. .....+-+.
T Consensus 207 ~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~ 286 (599)
T PF06609_consen 207 GIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVA 286 (599)
T ss_pred HHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHH
Confidence 666555444333222211111111 11110000 00 000001000
Q ss_pred --CcCCccccCCchHHHHHHhccc-hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCch---hHHHHHHHHHHHHHH
Q 013378 223 --VKIPVCKKIPSIRDLICLLRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTI 296 (444)
Q Consensus 223 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~ 296 (444)
..|...+.++++.+ .+ ++++ |.+...++..++....++....++|......++-++. ..++.....+.+..+
T Consensus 287 F~~wE~~~~~~~Pl~P-~~-Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~ 364 (599)
T PF06609_consen 287 FVVWEWFGAPKDPLFP-HR-LFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCA 364 (599)
T ss_pred HHHhhhhccCCCCcCC-HH-HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHH
Confidence 01111111112211 12 3444 6676666777777777777788888887777766653 456777777777777
Q ss_pred HHHHHHHHHhhhhCc-hhHHHHHHHHHHHHHHHhhhcc--CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHH
Q 013378 297 SQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 372 (444)
Q Consensus 297 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 372 (444)
+. ++.+.+..++++ |+.+.++..++.+++..++... +....+. .++.+++.+..........+-..|+++.|++.
T Consensus 365 g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~ 443 (599)
T PF06609_consen 365 GA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTAT 443 (599)
T ss_pred HH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHH
Confidence 76 444788887776 4555567666665544444332 3333333 56668888887777778888889999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH
Q 013378 373 GCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 373 g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
|+..+++.+|+.+|..+...++.
T Consensus 444 gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 444 GLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999998877664
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.89 E-value=1e-20 Score=170.27 Aligned_cols=258 Identities=11% Similarity=0.090 Sum_probs=195.1
Q ss_pred hHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh--------------------
Q 013378 107 FYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF-------------------- 165 (444)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~-------------------- 165 (444)
++.++++-++.|. +.+...+..+.+ ++..++|++++.+++.+..+++|.++||.+++.
T Consensus 10 ~~~~l~~~f~~g~-G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLAS-GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHh-hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8999999999999 558888999999 999999999999999999999999999999874
Q ss_pred hhhHHHHHHHHHHHHHHHHHH-HHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 166 LSTTSAFQAATIVSMLAAAYM-RVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 166 l~~~~~f~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
..|+++|++.+.+..+..+.. +..+||.++++.++ . + .++. . ..++ .+++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~------------------~--~-~~~~-~---~~~~----~~~~ 139 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVAR------------------V--S-SGDT-T---QKTS----AFQF 139 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccc------------------c--c-cccc-c---chhh----HHhh
Confidence 257889986665544433322 22334422111000 0 0 0000 0 0011 3456
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhc--cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
|.++...+..+++.....+...|.+.|+++. +|+++.+.+...+....+.++++ +..+++.||+++++.+..+..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHH
Confidence 7777777777777778889999999999754 69999999999999999999998 66689999999999888888777
Q ss_pred HHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 323 CINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.++.++....++.+..+...+.|++.+..+|...+...+..|+ +.+++.++. ....+|+.+.|.+.|.+.|..
T Consensus 219 ~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 219 VLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 7776655554444444456678999999999999999988884 456777764 677899999999999999976
No 110
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=1.6e-19 Score=172.42 Aligned_cols=373 Identities=11% Similarity=0.042 Sum_probs=241.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc------cCchhhHHHHHHHHhhh
Q 013378 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------RSISFFYAYYALRTLTA 118 (444)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~G 118 (444)
+++.+..+.+++.++. .....++++.|+++||+|||+++.++.++..++.++++++ ++ ++.+++.|++.|
T Consensus 56 ~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G 131 (591)
T PTZ00207 56 RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMT 131 (591)
T ss_pred HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHH
Confidence 3455556777777663 3445677789999999999999999999999999999997 46 899999999999
Q ss_pred hcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhh-HHHhHHhh--hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 013378 119 MVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVC-GTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDV 194 (444)
Q Consensus 119 ~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~-g~~l~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 194 (444)
++. +...+..... .+++| ++||++.|+.....++|..+ +++..+++ +|+..|++.+++.++..++...++++++
T Consensus 132 ~G~-~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 132 LGC-MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHH-HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 954 6666677777 88886 78999999999999999975 56666555 7888888888888777777777776665
Q ss_pred CCCC--CC---CCCCCcccc-----------------------------------------c------------c-----
Q 013378 195 PNDD--DD---DLTRPIITE-----------------------------------------E------------T----- 211 (444)
Q Consensus 195 ~~~~--~~---~~~~~~~~~-----------------------------------------~------------~----- 211 (444)
.+.. ++ +++++..++ . -
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~ 289 (591)
T PTZ00207 210 FHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVI 289 (591)
T ss_pred chhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3221 11 111110000 0 0
Q ss_pred -----------cccccCCCCCC------------C-cCC-----ccc-cCCchHHHHHHhccchhHHHHHHHHHHHHhhh
Q 013378 212 -----------EGVNQNESNSP------------V-KIP-----VCK-KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSE 261 (444)
Q Consensus 212 -----------~~~~~~~~~~~------------~-~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (444)
+...+++++++ . .+. +.+ ..+...+.+.+.+++..+|.+++..++.....
T Consensus 290 ~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~g 369 (591)
T PTZ00207 290 FPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAH 369 (591)
T ss_pred HHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCch
Confidence 00000000000 0 000 001 11222234555677889999888888877776
Q ss_pred cchhHHHHHHHhhccCcCc-hh-HHHHHHHHHHHHHHHHHHHHHHHh----hhh-----CchhHHHHHHHHHHHHHHHhh
Q 013378 262 GGMQASFLYFLKAQFHFNK-NQ-FADLMLIAGLAGTISQLLFMPLLA----PIL-----GEAKLLSLGLFAACINMFICS 330 (444)
Q Consensus 262 ~~~~~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~----~~~-----~~~~~~~~~~~~~~~~~~~~~ 330 (444)
......+....+..-|.+. .+ ...+.++.++.+.+|+ +.+|.++ +|. .|.-.+.+..+ +.++.+++.
T Consensus 370 l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GR-l~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~ 447 (591)
T PTZ00207 370 FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGR-LCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLF 447 (591)
T ss_pred heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhH-HHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHH
Confidence 6666666666554435522 21 2226788888999988 5556766 221 11122333444 555555555
Q ss_pred hccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHh-HHHHHHHHHhhhhcC---CCcc
Q 013378 331 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS-PLIFSPLTALFLSKG---APFN 405 (444)
Q Consensus 331 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~-~~~~g~l~~~~~~~~---~~~~ 405 (444)
+......+++ .++.|++.|...+.....++|.+. ++-|+-.-+.....-+|..+- -.+.|.++|+-.... ...+
T Consensus 448 ~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G 526 (591)
T PTZ00207 448 LTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTE 526 (591)
T ss_pred HHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCC
Confidence 5544234444 788899999999999999999999 888998888888888777776 568888888752111 1111
Q ss_pred c--chhHHHHHHHHHHHHHHHHH
Q 013378 406 F--PGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 406 ~--~~~~~~~~~~~~~~~~~~~~ 426 (444)
. ....+++.+++++++.+...
T Consensus 527 ~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 527 RVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred ceeeHhHHHHHHHHHHHHHHHHh
Confidence 1 11255666666666655543
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.1e-19 Score=163.38 Aligned_cols=351 Identities=14% Similarity=0.090 Sum_probs=261.7
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc----cCch-HHHHHHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRK-AMLTLPLT 89 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~ 89 (444)
...+...+........+..|.. +.+++++..+|.++.+.-+--++..|+.|.++|| +||| +.++.+.+
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYT-------dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYT-------DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHh-------cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3444444555555555555543 5568888999999999999999999999999996 6764 56667778
Q ss_pred HhHHHHHHHHhccCc---hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCC-hhhhhHHHHHHHHHHHhhhhhHHH---
Q 013378 90 LSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAY-ADNIS-ERQRASAFGILLGVLSASFVCGTL--- 161 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~--- 161 (444)
..++.+.++..+++. ......++...+.++ +-......-.++ ++..+ ++||.+..++-+...++|..+...
T Consensus 92 p~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l-~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~ 170 (467)
T COG2211 92 PFAIVAVLLFITPDFSMTGKLIYALVTYMLLGL-GYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP 170 (467)
T ss_pred HHHHHHHHHHcCCCcccCcchHHHHHHHHHHHH-HHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887741 114555666677777 334555556677 77764 789999999999999988665432
Q ss_pred --hHHh------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCc
Q 013378 162 --AARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 233 (444)
Q Consensus 162 --l~~~------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (444)
+... .||+..-.+.+++..+..+.+++..+|.+.+..+. +...+.+
T Consensus 171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~--------------------------~~~~~~~ 224 (467)
T COG2211 171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT--------------------------KTGVKLK 224 (467)
T ss_pred HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC--------------------------ccccccc
Confidence 2221 36787778888887778888888888876533321 0012235
Q ss_pred hHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchh
Q 013378 234 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 313 (444)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (444)
.++.+...++||.++..++..++.........+....|.+..+|.+...............+++. +..+++.+|+|+|+
T Consensus 225 ~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~~gkk~ 303 (467)
T COG2211 225 LKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKKFGKKK 303 (467)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhchHH
Confidence 56667778899999998887887777777778888888888888888777676666666666654 66689999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccC--CchHHH-HHHHHhhhhhhhHHHHHHHhhccC-------CCcchhHHHHHHHHHHHHH
Q 013378 314 LLSLGLFAACINMFICSISWS--AWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFAN 383 (444)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~ 383 (444)
+...+.++..++.+.+.+.+. .+..++ .++.+++.+...+..+++++|..+ .+..|...|....+..+|.
T Consensus 304 ~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ 383 (467)
T COG2211 304 LFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGL 383 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 999999999999888877763 333333 356688899999999999987764 3344889999999999999
Q ss_pred HHhHHHHHHHHHhhhhcC
Q 013378 384 IVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 384 ~~~~~~~g~l~~~~~~~~ 401 (444)
+++..+.|++.+.. |+.
T Consensus 384 ala~~~~g~~L~~~-Gyv 400 (467)
T COG2211 384 ALAGFIPGWILGAI-GYV 400 (467)
T ss_pred HHHHHHHHHHHHHc-CCC
Confidence 99999999999988 554
No 112
>PRK11462 putative transporter; Provisional
Probab=99.89 E-value=4.3e-19 Score=168.98 Aligned_cols=344 Identities=11% Similarity=0.000 Sum_probs=219.3
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc----cCchH-HHHHHHHH
Q 013378 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTL 90 (444)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~ 90 (444)
+.+...+...+....+..|..+ ..++++..+|.+..+.-+--++..|+.|.++|| +|||| .++++...
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~-------~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~ 89 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTD-------IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALP 89 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHH-------hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHH
Confidence 3333444445555555555433 447888999999999999999999999999996 68865 44567677
Q ss_pred hHHHHHHHHhccCc---hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCC-hhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 91 SIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAY-ADNIS-ERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 91 ~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
.+++..++...++. .....+++.-.+..+ +.......-.++ +|..+ +|||++..++...+.++|..+++.+...
T Consensus 90 ~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~-~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p 168 (460)
T PRK11462 90 FGIVCVLAYSTPDLSMNGKMIYAAITYTLLTL-LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666555531 113344555555555 324444456677 88876 7899999999999988887776555322
Q ss_pred ----h-------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCch
Q 013378 166 ----L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 234 (444)
Q Consensus 166 ----l-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (444)
+ +|+....+.+++.+++..+.+...||.++.++ ++.+.
T Consensus 169 lv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-------------------------------~~~~~ 217 (460)
T PRK11462 169 LVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-------------------------------TTTSM 217 (460)
T ss_pred HHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-------------------------------cCCCH
Confidence 2 45666666666555555444444455322110 01135
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhH
Q 013378 235 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 314 (444)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 314 (444)
++.++..++||.++.+....++..............|.+...|. +...+.+.....+..+++. .+.+++.||+++|+.
T Consensus 218 ~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk~~ 295 (460)
T PRK11462 218 REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGS-ALAKPLTDWKCKVTI 295 (460)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHH
Confidence 66677788888888776666566555554445555555555443 3334555666777777776 566899999999888
Q ss_pred HHHHHHHHHHHHHHhhhccCC--chHH-HHHHHHhhhhhhhHHHHHHHhhccC-------CCcchhHHHHHHHHHHHHHH
Q 013378 315 LSLGLFAACINMFICSISWSA--WVPY-ATTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANI 384 (444)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~ 384 (444)
...+.....+..+++.+.++. +..+ ..++.+++.+...+..+++..|..+ .+..|..++..+....+|..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~a 375 (460)
T PRK11462 296 FWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLA 375 (460)
T ss_pred HHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 765444433323333332222 1222 2344566666666766777777665 33336666777899999999
Q ss_pred HhHHHHHHHHHhhhhcC
Q 013378 385 VSPLIFSPLTALFLSKG 401 (444)
Q Consensus 385 ~~~~~~g~l~~~~~~~~ 401 (444)
+++.+.|.+.+.. |+.
T Consensus 376 lg~~i~g~iL~~~-Gy~ 391 (460)
T PRK11462 376 FGGALIGWMLAYG-GYD 391 (460)
T ss_pred HHHHHHHHHHHHc-CCC
Confidence 9999999999876 554
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.88 E-value=1.3e-18 Score=154.88 Aligned_cols=357 Identities=14% Similarity=0.081 Sum_probs=255.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccccC-----chHHHH-HHHHHhHHHHHHHHhc-----c-------Cc-
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT-LPLTLSIIPLAILAYR-----R-------SI- 104 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~-~~~~~~~~~~~~~~~~-----~-------~~- 104 (444)
.|.+++....+...+...+... ..+.+|+.||+.+ ||..++ .+.+....+..+..++ . +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 4557777888888888777765 5999999999998 776555 5666666655555442 2 11
Q ss_pred hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-h----hHH--HHHHHH
Q 013378 105 SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-S----TTS--AFQAAT 176 (444)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-~----~~~--~f~~~~ 176 (444)
.+.......-.+.|+|. ........++ .|..|||+|+++.++...+.-+|.+++..+.+.+ . .|. .+...+
T Consensus 87 ~g~~~a~l~F~l~G~G~-~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGV-HASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHhhH-hHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 11234455667778855 5555668888 9999999999999999999999999998888764 1 122 223333
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHH
Q 013378 177 IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFF 256 (444)
Q Consensus 177 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (444)
++.++..++..+. .|++..+.. +...++++++++.++.+..+|+....+...++
T Consensus 166 ~i~~~l~~ia~wg-~E~r~~~~~-------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l 219 (403)
T PF03209_consen 166 LIALLLNLIALWG-QEPRRSRRA-------------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFL 219 (403)
T ss_pred HHHHHHHHHHHHh-cccCCcccc-------------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHH
Confidence 3332222223222 222211111 11122334677778888899999998888888
Q ss_pred HHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHh-hhhCchhHHHHHHHHHHHHHHHhhh---c
Q 013378 257 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA-PILGEAKLLSLGLFAACINMFICSI---S 332 (444)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~---~ 332 (444)
..+.+..-...+-+|--+.+|++..+...+....+.+..++- ...+++. +|.++++....+.....+++.++.. .
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~ 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888888999999999999999999998888888888875 4445654 4788888888888888777766544 3
Q ss_pred cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC--CCcccchh
Q 013378 333 WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG--APFNFPGF 409 (444)
Q Consensus 333 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~--~~~~~~~~ 409 (444)
.+.+.+.. .+++|++.+.......+...+..++++.|..+|.-...+.+...++..++|.+.|...... .+....+.
T Consensus 299 ~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~ 378 (403)
T PF03209_consen 299 GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGV 378 (403)
T ss_pred ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHH
Confidence 45666655 7888999999999999999999999999999999999999999999999999998753222 13333455
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 013378 410 SIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~ 429 (444)
+|.+-++..+.+......+.
T Consensus 379 VF~lEa~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 379 VFALEAVLLLAALVLLGRLD 398 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 66666666666666555443
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.1e-21 Score=163.15 Aligned_cols=354 Identities=13% Similarity=0.084 Sum_probs=241.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccccccc-cCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhccc
Q 013378 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (444)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (444)
.+.+++..+..++.+.|+....+...+.|++.|| +|-|..-++-+....++.++++.-.-.+.+|++..+|++.|+|+.
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 4446666677888999999999999999999997 677776666566666777776653322339999999999999775
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH----HHhHHhhhh------------HHHHHH-HHHHHHHHHH
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG----TLAARFLST------------TSAFQA-ATIVSMLAAA 184 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g----~~l~~~l~~------------~~~f~~-~~~~~~~~~~ 184 (444)
+.. .+.+.+ .-|+..||.+.++|+.....-+|..+- |.+....+- ...+-. .....++++.
T Consensus 152 SlA-VaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical 230 (459)
T KOG4686|consen 152 SLA-VAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL 230 (459)
T ss_pred hhh-hhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 567888 999999999999999998888887653 333222211 111111 1111111111
Q ss_pred HHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcch
Q 013378 185 YMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM 264 (444)
Q Consensus 185 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (444)
.. -.-|+..++ ...+++... . ++.+.. +.++ ..|.+|.+.+.++++.....-+
T Consensus 231 ~l--g~~D~rAer--------ilh~e~g~~----G----e~pkLt---dv~~------f~ppfw~~~iicv~yyva~fPF 283 (459)
T KOG4686|consen 231 SL--GLSDDRAER--------ILHLEEGFL----G----EEPKLT---DVNT------FYPPFWVLVIICVLYYVAWFPF 283 (459)
T ss_pred Hh--hhhhhHHHH--------HHhhhcCcc----c----CCcccc---cccc------cCccHHHHHHHHHHHHHHHHHH
Confidence 11 111111110 000000000 0 000000 1111 2477888888888898888888
Q ss_pred hHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH-HHHHHHHhhhccCCchHHH-HH
Q 013378 265 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA-ACINMFICSISWSAWVPYA-TT 342 (444)
Q Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 342 (444)
...-|.++++++|+|+.+++.+.+.....+.+.+.+. |.++||.|++.....+..+ ...+-..+.+ +.+..+. +.
T Consensus 284 i~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvf-g~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~ 360 (459)
T KOG4686|consen 284 ITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVF-GAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMT 360 (459)
T ss_pred hhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhH-HHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHH
Confidence 9999999999999999999998888888888887555 8999999998766554333 3333333332 2334444 66
Q ss_pred HHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHH
Q 013378 343 AFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAF 422 (444)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (444)
+.|..........+..+...+|+++.|++.|.++.++++|-++.|.+.|.+.|.-+++ .+....++..+.+++.+.
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y----~~le~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY----DNLEAFFLIIGLMALTSV 436 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch----hhHHHHHHHHHHHHHHHH
Confidence 7788888777778889999999999999999999999999999999999999875333 345557777777777777
Q ss_pred HHHHhcccCC
Q 013378 423 IQSLMMSHTP 432 (444)
Q Consensus 423 ~~~~~~~~~~ 432 (444)
...+...+++
T Consensus 437 gil~~~N~kq 446 (459)
T KOG4686|consen 437 GILFYLNKKQ 446 (459)
T ss_pred HHHhheeccc
Confidence 7777666554
No 115
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=3.9e-19 Score=167.15 Aligned_cols=374 Identities=10% Similarity=0.018 Sum_probs=220.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-CchHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLT 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~ 85 (444)
++.++.++...+...++.......+|.|+.+.+ +.+..+.+.+.+.+.....++.++.|+++||+ ||||++.
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l-------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il 80 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQL-------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM 80 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 556777777888888888888889999986643 45557788889999999999999999999999 9999999
Q ss_pred HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChh--hhhHHHHHHHHHHHhhhhhHHHh
Q 013378 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISER--QRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~--~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
++.++.+++.++++..++. ...+++...+.++ +.|...+...++ +|.+|++ +|..++++.....++|..++|.+
T Consensus 81 iG~il~~lg~lll~~~~~~--~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 81 LGALLMAIGHVVLGASEIH--PSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 9999999998777654321 2223333333334 224555666788 9999875 69999999999999999999999
Q ss_pred HHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccc---------------cccCCCCCCC
Q 013378 163 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG---------------VNQNESNSPV 223 (444)
Q Consensus 163 ~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 223 (444)
.+++ |||+.|.+.++.. +..++.+...++..++....++ ++..++.... .....-.++.
T Consensus 158 ~g~L~~~~Gw~~~F~iaaigm-~l~li~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
T PRK15462 158 CGYAQEEYSWAMGFGLAAVGM-IAGLVIFLCGNRHFTHTRGVNK-KVLRATNFLLPNWGWLLVLLVATPALITVLFWKEW 235 (493)
T ss_pred HHHHHhhhChHHHHHHHHHHH-HHHHHHHHHhhhhhccCCCCCC-CCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 8999999876543 3333333322222111100000 0000000000 0000000000
Q ss_pred cCCccc--cCCc---hHHHH-HHh--ccchhHHH---HHHHHHHHHhhhcchhHHHHHHHhhcc-----CcCchhHHHHH
Q 013378 224 KIPVCK--KIPS---IRDLI-CLL--RSSVTLSQ---AAVVAFFSGLSEGGMQASFLYFLKAQF-----HFNKNQFADLM 287 (444)
Q Consensus 224 ~~~~~~--~~~~---~~~~~-~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~ 287 (444)
...... .... +.... +.. ..+++++. +.+...+++..+....+.+..|.++.. |++ ...++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~q 314 (493)
T PRK15462 236 SVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQ 314 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHH
Confidence 000000 0000 00000 000 01223322 333333444444444555666665543 322 1246677
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhC--ch-----hHHHHHHHHHHHHHHHhhhcc---------C-CchHHHHHHHHhhhhh
Q 013378 288 LIAGLAGTISQLLFMPLLAPILG--EA-----KLLSLGLFAACINMFICSISW---------S-AWVPYATTAFSVLVVF 350 (444)
Q Consensus 288 ~~~~~~~~~~~~~~~~~l~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~g~~~~~ 350 (444)
+...+..++.+.+.. ++=.|.. +| .=...|+++.+++++.+.+.. + .|......+..++.-+
T Consensus 315 slNp~~ii~l~P~~a-~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~ 393 (493)
T PRK15462 315 SINAFAVMLCGVFLA-WVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELF 393 (493)
T ss_pred hHhHHHHHHHHHHHH-HHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 778777777765553 4433331 11 125567777777776664311 2 2233335667889999
Q ss_pred hhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 351 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..|...+.+++..|++.+|..+|..... +.++++.+.|.+.+..
T Consensus 394 ~sPvgls~~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 394 IDPVAMSQITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQT 437 (493)
T ss_pred HChHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999987442 2245555555554443
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.86 E-value=8.1e-20 Score=167.49 Aligned_cols=363 Identities=17% Similarity=0.222 Sum_probs=245.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCc-hHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLT 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~ 85 (444)
+|.+++..+..|+.....+++.|..-.|.++. |.+.+....|++.++..++.+++++..|+++.|.+. |+.++
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 67788888899999999999999988888662 123344677999999999999999999999999997 88999
Q ss_pred HHHHHhHHHHHHH-HhccCch-hhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHh
Q 013378 86 LPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLA 162 (444)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l 162 (444)
.+.++..+++++. ++..-.+ +.+.++++|++.|+|. +.. ....+| ++....++|.|+++....+..+|.++||.+
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 9999999999988 4432211 3789999999999954 555 468899 999999999999999999999999999988
Q ss_pred HHhh------h-----------hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcC
Q 013378 163 ARFL------S-----------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 225 (444)
Q Consensus 163 ~~~l------~-----------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (444)
+..+ | +..+-|+.+++.++..+...++++|.++...++++..+ ++.+...+
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~------------~~~~~~~~ 252 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV------------EEEKSDIE 252 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc------------hhhccchh
Confidence 7664 1 24567888888888888888889998776543211100 00000000
Q ss_pred CccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhH----HHHHHHHHHHHHHHHHHH
Q 013378 226 PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQF----ADLMLIAGLAGTISQLLF 301 (444)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~ 301 (444)
..+.. + .| .+..+.+....+...+......+..+.+....++++.+++ |...++.++.........
T Consensus 253 ~~~~~--~-~d-------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~ 322 (488)
T KOG2325|consen 253 KVKKP--K-LD-------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLY 322 (488)
T ss_pred hhccC--C-hh-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHH
Confidence 00010 0 11 1222333444455555555556667777777788877665 334444444444443222
Q ss_pred HHHHh-hhhCchhHHHHHHHHHHHHHHHhhhc----c---------------------------CCchHHH--HHHHHhh
Q 013378 302 MPLLA-PILGEAKLLSLGLFAACINMFICSIS----W---------------------------SAWVPYA--TTAFSVL 347 (444)
Q Consensus 302 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~~~~--~~~~g~~ 347 (444)
.... .++.+|+.+..+......+..+.... . +.+..+. .+++|.+
T Consensus 323 -~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~ 401 (488)
T KOG2325|consen 323 -IFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIA 401 (488)
T ss_pred -HHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccc
Confidence 2222 23344555555533333333322210 0 0011111 2344666
Q ss_pred hhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 348 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
.........+.-+|...|+++++..|..+.....+..++|.+...++... +++
T Consensus 402 ~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~ 454 (488)
T KOG2325|consen 402 FPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPR 454 (488)
T ss_pred cccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-Ccc
Confidence 66667788889999999999999999999999999999999998888876 444
No 117
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=1.3e-16 Score=142.44 Aligned_cols=321 Identities=12% Similarity=0.013 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc---hhhH--HHHHHHHhhhhcccchh
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI---SFFY--AYYALRTLTAMVCEGSI 125 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~l~G~~~~g~~ 125 (444)
..+-|+.-+|.+.+....+++-|+.||+|-|...+++.....++..+-..+... +.++ ....+..+.+. ++...
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~Fi 157 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQPFI 157 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhhHh
Confidence 456788889999999999999999999999999999999999999888776443 2244 77788888888 65666
Q ss_pred hhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----------hhHH--HHHHHHHHHHHHHHHHHHhccC
Q 013378 126 NCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----------STTS--AFQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 126 ~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----------~~~~--~f~~~~~~~~~~~~~~~~~~~e 192 (444)
...-..+ .-|++++||..+..+-.++..+|..+|-++...+ .|.. .|+....+..+.+++..+..++
T Consensus 158 m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 158 LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred hccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6555677 8899999999999988888777777775554332 4432 4554444444444444455555
Q ss_pred CCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHH
Q 013378 193 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 272 (444)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (444)
.|+.+... .+......++.+..+..++++++..+.+...+....+++..+.+..-+
T Consensus 238 ~P~tPps~------------------------s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l 293 (480)
T KOG2563|consen 238 KPPTPPSA------------------------SQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL 293 (480)
T ss_pred CCCCCCch------------------------hHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc
Confidence 44433221 000000124666777788999998888777777666666666665444
Q ss_pred hhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCch-hHHHHHHHHHHHH-HHHhhhcc---CCchHHH-HHHHHh
Q 013378 273 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA-KLLSLGLFAACIN-MFICSISW---SAWVPYA-TTAFSV 346 (444)
Q Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~-~~~~g~ 346 (444)
... |++....|+......+.+++++ +++|.+.||.+.- ....+......++ +.+..... ..+.++. ..++|.
T Consensus 294 ~~s-gY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 294 CPS-GYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccc-cCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 444 7777888999888889999997 6668999998764 4444444444444 22222222 2333333 667788
Q ss_pred hhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhh
Q 013378 347 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 398 (444)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 398 (444)
+.....|....+..|..-|..-++..|+.+..+++-+.+-.++.+...+...
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 8888899888888888777888899999999999888888888888877653
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.74 E-value=2.4e-19 Score=171.37 Aligned_cols=374 Identities=15% Similarity=0.185 Sum_probs=2.5
Q ss_pred HHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHH
Q 013378 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (444)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (444)
.+..++..+..+.....++.+ +..++++..+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.++
T Consensus 9 ~~~~~~q~~~~g~~~~~ltti--------ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTI--------ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 334444444445555555554 356688889999999999999999999999999998888888999999999
Q ss_pred HHHHHHhcc-----------C------------------------------------chhhHHHHHHHHhhhhcccchhh
Q 013378 94 PLAILAYRR-----------S------------------------------------ISFFYAYYALRTLTAMVCEGSIN 126 (444)
Q Consensus 94 ~~~~~~~~~-----------~------------------------------------~~~~~~l~~~r~l~G~~~~g~~~ 126 (444)
+++++++-+ + ...++.++++.++.|+|+ ...+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~-~pl~ 159 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGA-TPLY 159 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccc-cCCc
Confidence 988876410 0 012478889999999954 7778
Q ss_pred hhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--------------------------hhHHHHHHHHHHH
Q 013378 127 CLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVS 179 (444)
Q Consensus 127 ~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--------------------------~~~~~f~~~~~~~ 179 (444)
+...+| =|.+++++-+..+|++.....+|..+|-++++.+ .|+..|++.+.+.
T Consensus 160 tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 160 TLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 899999 9999999999999999999999999998887652 2556677777666
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCc-ccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHH
Q 013378 180 MLAAAYMRVFLKDDVPNDDDDDLTRPI-ITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 258 (444)
Q Consensus 180 ~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (444)
++..+...+ .|+..+...+.++.++. .++..+..+++..+++..+...+..+++...++.+.+||.+....+......
T Consensus 240 ~l~aipl~~-FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~ 318 (539)
T PF03137_consen 240 FLSAIPLFF-FPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFES 318 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHc-CCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 555555444 45444333111111111 1111111101000000011111222344455666889999999999999999
Q ss_pred hhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC--chhHHHHHHHHHHHHHHH---hhhc-
Q 013378 259 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI---CSIS- 332 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~---~~~~- 332 (444)
....++.++.|-|++.+++.++.+++.+.....+.......+++|++.+|++ .|..+....+...++.+. ..+.
T Consensus 319 ~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~ 398 (539)
T PF03137_consen 319 FIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLG 398 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 9999999999999999999999999988887777666666788899999875 344444444443333322 1100
Q ss_pred ----------cC-----------------------------------C----c-hHHH-HHHHHhhhhhhhHHHHHHHhh
Q 013378 333 ----------WS-----------------------------------A----W-VPYA-TTAFSVLVVFATPSFRSIVSK 361 (444)
Q Consensus 333 ----------~~-----------------------------------~----~-~~~~-~~~~g~~~~~~~~~~~~~~~~ 361 (444)
.. . . .+.+ .++..+..+...........+
T Consensus 399 C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR 478 (539)
T PF03137_consen 399 CPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLR 478 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeec
Confidence 00 0 0 0111 122223334445555566778
Q ss_pred ccCCCcchhHHHHHHHH-HHHHHHHhHHHHHHHHHhh
Q 013378 362 QVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 362 ~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~ 397 (444)
.+|+++|+.+.|+...+ +-+|.+-||.++|.+.|..
T Consensus 479 ~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 479 CVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------
T ss_pred cCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 99999999999998665 5668899999999999974
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.73 E-value=2.9e-15 Score=136.23 Aligned_cols=371 Identities=13% Similarity=0.047 Sum_probs=233.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-CchHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLT 85 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~ 85 (444)
.|.++.++...+-..+++.-....+-.|++.++.++ .+.+..++.-+.+.|..-.-...++.|+++||+ |+|+.+.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 467888899999999998877778888888876433 556666666777777777777889999999995 9999999
Q ss_pred HHHHHhHHHHHHHHhcc--CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChh--hhhHHHHHHHHHHHhhhhhHH
Q 013378 86 LPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISER--QRASAFGILLGVLSASFVCGT 160 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~--~r~~~~~~~~~~~~lg~~~g~ 160 (444)
.+.++.++|.++.+... + ...++++-.+.++ +.|..-+...++ .|.+|++ +|-..++++.++.++|.+++|
T Consensus 97 lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~i-G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSG---PGGLYIGLALIIV-GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHh-ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 99999999999999985 5 6788888888888 558888888899 9999865 477788999999999999999
Q ss_pred HhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccccc------------cc----ccCCCC
Q 013378 161 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETE------------GV----NQNESN 220 (444)
Q Consensus 161 ~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~ 220 (444)
.+.+++ +|+..|-+.++-..+. ++.+...|....+...+++......+... .. ...+..
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~g-l~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 251 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIG-LVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTF 251 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH-HHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888775 7888888877654333 33333344332221111000000000000 00 000000
Q ss_pred CC-------------CcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcC----chhH
Q 013378 221 SP-------------VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN----KNQF 283 (444)
Q Consensus 221 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~ 283 (444)
.. ..+....++.. .+ -+|-.....+++...+++..+....+.+..|..+..+.+ ....
T Consensus 252 ~~~~~~~~i~~~~~~~~~~~~~~~~~-~e----r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~ 326 (498)
T COG3104 252 SGVLLVISILIAIIYFAEAFRSPKVF-DE----RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPP 326 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccH-HH----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCH
Confidence 00 00000000000 00 000112223344444444444444555666654332222 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCch-------hHHHHHHHHHHHHHHHhhhc-------c---CCchHHH-HHHHH
Q 013378 284 ADLMLIAGLAGTISQLLFMPLLAPILGEA-------KLLSLGLFAACINMFICSIS-------W---SAWVPYA-TTAFS 345 (444)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~-~~~~g 345 (444)
++..+...+.-++...+. .++..|.+++ .-..+++.++..+++++... . +.+..+. .++..
T Consensus 327 ~~fQslNp~~Iii~~pI~-a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 327 AWFQSLNPFFIILFSPIL-AALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHhhCHHHHHHHHHHH-HHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 566777777777666555 3555553322 22445666666666655443 1 1233333 56778
Q ss_pred hhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 346 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
++.-+..|...+++.+..|+...+..++..-.....++.++..+.+
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 9999999999999999999988888888777777777776666655
No 120
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.71 E-value=1.9e-15 Score=144.66 Aligned_cols=368 Identities=16% Similarity=0.183 Sum_probs=256.2
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (444)
+..+...+..+.+...+..+ ++.++++..+.|++.+.+-++..+...+..+..-|..|-|.+-++.++.+++
T Consensus 104 ~~~~~q~l~~~y~~s~Itti--------ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 104 LAAFAQGLYVGYFNSVITTI--------ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred HHHHHHHhhhhhhhhhhhhh--------hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 33444444444444444443 3455666678899999999999999999999999999999999999999999
Q ss_pred HHHHHhc--------------------c---------------------------Cch--hhHHHHHHHHhhhhcccchh
Q 013378 95 LAILAYR--------------------R---------------------------SIS--FFYAYYALRTLTAMVCEGSI 125 (444)
Q Consensus 95 ~~~~~~~--------------------~---------------------------~~~--~~~~l~~~r~l~G~~~~g~~ 125 (444)
.+++++- + ..+ .+..++++.++.|+|. ...
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~-Tpi 254 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA-TPI 254 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC-CCC
Confidence 9988752 0 000 1347888999999955 777
Q ss_pred hhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----------------------hhHHHHHHHHHHHHH
Q 013378 126 NCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----------------------STTSAFQAATIVSML 181 (444)
Q Consensus 126 ~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----------------------~~~~~f~~~~~~~~~ 181 (444)
++...+| =|...+++-+..+|++.....+|.++|-++++++ .|+.-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 7899999 8999999999999999999999999998888773 367778888888766
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhh
Q 013378 182 AAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSE 261 (444)
Q Consensus 182 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (444)
..+.++ ++|+..++..++.+. .+.+ ..+.+++..+..+...+..+++.+.++.+++||.+....+...+....+
T Consensus 335 ~a~p~f-~fPk~lp~~~~~~~~---~~~~--~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~ 408 (735)
T KOG3626|consen 335 SAVPLF-FFPKELPKSQKRKRA---RDLH--VLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAI 408 (735)
T ss_pred HHHHHH-hCcccCccccccchh---hhhc--ccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 666654 456554433221000 0000 0000000001111111222244555667889999999999999999999
Q ss_pred cchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC--chhHHHHHHHHHHHHHHH---hhhc----
Q 013378 262 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI---CSIS---- 332 (444)
Q Consensus 262 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~---~~~~---- 332 (444)
.++.+++|-|++.+||.++..+..+....++..+..+.+++|++.+|+. .|....+.++...++++. ..+.
T Consensus 409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~ 488 (735)
T KOG3626|consen 409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCES 488 (735)
T ss_pred hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCC
Confidence 9999999999999999999999999988888888888889999999875 344444444444433332 1100
Q ss_pred -------------------------------------------------------------cC------------C----
Q 013378 333 -------------------------------------------------------------WS------------A---- 335 (444)
Q Consensus 333 -------------------------------------------------------------~~------------~---- 335 (444)
.+ .
T Consensus 489 ~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~ 568 (735)
T KOG3626|consen 489 SPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKN 568 (735)
T ss_pred CcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccC
Confidence 00 0
Q ss_pred ------------------chHHHHHHHH-hhhhhhhHHHHHHHhhccCCCcchhHHHHHHH-HHHHHHHHhHHHHHHHHH
Q 013378 336 ------------------WVPYATTAFS-VLVVFATPSFRSIVSKQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 336 ------------------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~ 395 (444)
..+++.++++ +..+...+..+.++.+.+|+|+|.-++|+..+ ++-+|.+-+|.+.|++.|
T Consensus 569 ~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 569 GNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred CCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 0011122222 22333445566677899999999999999865 566788999999999999
Q ss_pred hh
Q 013378 396 LF 397 (444)
Q Consensus 396 ~~ 397 (444)
..
T Consensus 649 ~t 650 (735)
T KOG3626|consen 649 TT 650 (735)
T ss_pred hH
Confidence 65
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.65 E-value=1.9e-13 Score=128.73 Aligned_cols=369 Identities=15% Similarity=0.158 Sum_probs=223.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-----CchHHHHHHHHHhHHHHHHHHhccCc-hhhHHHHHHHHhhhh
Q 013378 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAM 119 (444)
Q Consensus 46 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~ 119 (444)
++.++.+.....+...++..+ -+++|.++|.+ .||+-++++.++..++...++..++. .......+.-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 356666777777777777664 78899999986 35666677777776666666654331 114455555566666
Q ss_pred cccchhhhhhhhh-hccCC--hhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccC
Q 013378 120 VCEGSINCLALAY-ADNIS--ERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 120 ~~~g~~~~~~~~~-~~~~~--~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e 192 (444)
+.......+.++ .|... +++|+...+.......+|.+++..++|.+ +++..|.+.+++..+..+...+..+|
T Consensus 99 -g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 99 -GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred -HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 335666678888 77773 34478888888889999999998888775 66888888887776666666666665
Q ss_pred CCCCCCCCCCCCCcccccccccccCCCCCCCcCCccc-cCCchHHHHHHhccchhHHHHHH-HHHHHHhhhcchhHHHHH
Q 013378 193 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK-KIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASFLY 270 (444)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 270 (444)
.+..++++.. ...+++ .+.... .++..++. +...+.+.++...+ ..++............-.
T Consensus 178 -~~~~~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy 241 (433)
T PF03092_consen 178 -RKVRPADEVF-----------SFGKEE---VPCLFGSFREQLSEL-WRALQQRAIWQPILFFIFFFNLPPSISSASSFY 241 (433)
T ss_pred -ccccccchhh-----------cccccc---cchhhHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence 2221111000 000000 000000 11122232 23445566666555 333333333222110111
Q ss_pred HHhhccC---cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhh-hc---------cCCch
Q 013378 271 FLKAQFH---FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS-IS---------WSAWV 337 (444)
Q Consensus 271 ~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~ 337 (444)
+..+..+ +++...+.+..+..++.+++..+. .+...+.+-|+++....++.++..+.-. +. ++.+.
T Consensus 242 ~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y-~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 242 FQTDALGGPHFSPSFYGTLSIVGSIASLLGILLY-RKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred EEeccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 2233345 888888888866667777775444 4555556677777666665554433211 11 11222
Q ss_pred HHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHH
Q 013378 338 PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGL 416 (444)
Q Consensus 338 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 416 (444)
.+. .++..+.....+-......+|..|+..-|+.+++..++.++|..++..++..+.+.++-.+..|.-.....++..+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 222 4555566666666777788999999999999999999999999999999999998874333334334445566666
Q ss_pred HHHHHHHHHHhcccCCC
Q 013378 417 ASMVAFIQSLMMSHTPA 433 (444)
Q Consensus 417 ~~~~~~~~~~~~~~~~~ 433 (444)
+.++.+.+...++++.+
T Consensus 401 ~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 401 IQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHcCCCch
Confidence 66677777766666443
No 122
>PRK10054 putative transporter; Provisional
Probab=99.63 E-value=2e-14 Score=134.86 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=128.1
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
+|.++.+.+..++..........++|.|+++.+|+|..+.|+..+...+...+.+ ...|+++||+|+|+.+..+.....
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS-LGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCcchhHHHHHHHHH
Confidence 3556677777888888888889999999998899999999999999999999887 555899999999999999988888
Q ss_pred HHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 324 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
++.+.+.+.++.+..+. ..+.+.+.+...+...++..|..|+++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888777665544 3444555566678888999999999999999999999999999999999998875
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.63 E-value=3.3e-13 Score=118.73 Aligned_cols=271 Identities=13% Similarity=0.079 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHH
Q 013378 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (444)
....+...+..+..|.+=...+ +.+.+..+++.+....+...++.+++.|.++||+|||+.-+.-.++.+++
T Consensus 41 ~vY~La~~aDWLQGpY~Y~LY~--------~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s 112 (354)
T PF05631_consen 41 LVYLLAMAADWLQGPYLYALYE--------SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLS 112 (354)
T ss_pred HHHHHHHHHHHhhcchhHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 3344556677777776543332 23555578899999999999999999999999999999999999999888
Q ss_pred HHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh--hcc----CChhhhhHHHHHHH-HHHHhhhhhHHHhHHhh-
Q 013378 95 LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY--ADN----ISERQRASAFGILL-GVLSASFVCGTLAARFL- 166 (444)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~--~~~----~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~l- 166 (444)
++ +-..++ ++.++++|++.|+ +......+-.++ .|. +|++..+..++... ...++-.+.+.+++..+
T Consensus 113 cl-~k~~~~---~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 113 CL-TKHSSN---YPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred HH-HHhccc---cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 85 445577 9999999999999 556666666665 443 23343444444443 22233333334444332
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHh
Q 013378 167 -----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 241 (444)
Q Consensus 167 -----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (444)
+...||.....+..+..+++...-+|+..+..++ .+.....++.++.+
T Consensus 188 ~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~---------------------------~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 188 DWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS---------------------------SSLSGSFREAWRAI 240 (354)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc---------------------------cchHHHHHHHHHHH
Confidence 3378898888877776666655556654332211 01112556677778
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
+++|+++.+.+...++-...+.+.....+-++.. + ...-.|.+++...+..++|+.+....+.++......+.....+
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~-~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~ 318 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD-D-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAV 318 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCC-C-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 8999999988888888887777644444444321 1 2234699999999999999866633344555555555544444
Q ss_pred HHHHHH
Q 013378 322 ACINMF 327 (444)
Q Consensus 322 ~~~~~~ 327 (444)
..+++.
T Consensus 319 aa~~l~ 324 (354)
T PF05631_consen 319 AAVSLA 324 (354)
T ss_pred HHHHHH
Confidence 444443
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.58 E-value=9e-14 Score=131.18 Aligned_cols=184 Identities=12% Similarity=0.100 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcc---hhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDE---CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+.+.+..++...........+|.+.++. +.++ .+.+....+...++..++..++.++.|+++||+|||+++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEF---GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHh---cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3444555555554555556667776553 2111 123345679999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhcc-CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHH-HHHHhhhhhHHHhHH
Q 013378 88 LTLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILL-GVLSASFVCGTLAAR 164 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~ 164 (444)
.++.+++..+..... +...++.+++.+++.|+ +.+...+....+ .|..|+++|++.+++.+ ...++|..+||.+++
T Consensus 288 ~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~-~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G 366 (418)
T TIGR00889 288 LVAWALRFGFFAYGDPEYFGYALLFLSMIVYGC-AFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSG 366 (418)
T ss_pred HHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999988877777643 21114667788999999 446666777888 99999999999999997 678899999999988
Q ss_pred hh----------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013378 165 FL----------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 198 (444)
Q Consensus 165 ~l----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 198 (444)
.+ ||+..|.+.+++.++..++..+++||+.+..+
T Consensus 367 ~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 367 VMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 63 48899999888888888888888888754433
No 125
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.56 E-value=1.6e-13 Score=131.37 Aligned_cols=153 Identities=15% Similarity=0.106 Sum_probs=132.1
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhc--cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLF 320 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (444)
++.++.+....++..+.+++...++|.|+++. +|++..+.+...+...+...++. +.+|+++|| +|||+++..+.+
T Consensus 9 p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~-~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 9 PKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLT-SVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhcchHHHHHHHHH
Confidence 45566677777777888899999999999887 89999999999999999999997 666999999 899999999999
Q ss_pred HHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc---chhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 321 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+.+++.+++.+.++.+.... ..+.+++.+...|...+++.+.+|+++ |+++.++.+...++|..+||.+.+.+.+.
T Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~ 167 (475)
T TIGR00924 88 VLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN 167 (475)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988888776555444 556788888888999999999998764 88899999999999999999999999886
Q ss_pred h
Q 013378 397 F 397 (444)
Q Consensus 397 ~ 397 (444)
.
T Consensus 168 ~ 168 (475)
T TIGR00924 168 Y 168 (475)
T ss_pred c
Confidence 5
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.56 E-value=1.6e-14 Score=114.58 Aligned_cols=132 Identities=22% Similarity=0.305 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hcc
Q 013378 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADN 135 (444)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~ 135 (444)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+...+.++ ++.+.+.+++.|+ +.+...+....+ .|.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGF-GAAFALVAGAALIADI 79 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHhHHHHHHHH
Confidence 34557788899999999999999999999999999999988888888 8899999999999 446677788888 999
Q ss_pred CChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccC
Q 013378 136 ISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 136 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e 192 (444)
.|+++|++..++.+....+|..++|.+.+.+ +|++.+++.+...++..+...+..||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999888764 78999998887776666666665665
No 127
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.54 E-value=3.1e-13 Score=126.99 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHH
Q 013378 249 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 328 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (444)
..+...++.....+....+++.|+++++|+|+.+.|+..+...+...+.+ ...|+++||+|+|+.+..+.....++.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~-~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLG-IFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-hhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44667777777778888899999988889999999999999888888887 55589999999999999999999999988
Q ss_pred hhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 329 CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 329 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
+...++.+.++. .++.|++.+...|...+++.+.+|+++|+++.|+.+...++|..+||.+.|.+.+
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777766555 5566878777888899999999999999999999999999999999999999984
No 128
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.54 E-value=3.5e-13 Score=124.77 Aligned_cols=164 Identities=19% Similarity=0.310 Sum_probs=128.9
Q ss_pred HHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhh
Q 013378 252 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 331 (444)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (444)
+..++...........+|.++.+.+|.++.+.+++.+...+...+.+ +..|++.||+|||+.+..+..+.+++.+...+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFS-PFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHH-HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 44555555565666777757778889999999999999999999997 55589999999999999999999888555555
Q ss_pred ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhH
Q 013378 332 SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFS 410 (444)
Q Consensus 332 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 410 (444)
.++.+..+. .++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +.+. .
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~-------~ 153 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRW-------A 153 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCC-------H
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cccc-------c
Confidence 455554444 577789999999999999999999999999999999999999999999999998665 4333 3
Q ss_pred HHHHHHHHHHHHHH
Q 013378 411 IMCIGLASMVAFIQ 424 (444)
Q Consensus 411 ~~~~~~~~~~~~~~ 424 (444)
+.+.+++.++..++
T Consensus 154 ~~~~~~~~~~~~il 167 (352)
T PF07690_consen 154 FLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhh
Confidence 45555555555543
No 129
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.53 E-value=6.6e-11 Score=107.33 Aligned_cols=324 Identities=13% Similarity=0.046 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hc
Q 013378 56 QQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-AD 134 (444)
Q Consensus 56 ~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~ 134 (444)
+.-...-.++...++...+.|..+.|++++++.+...+...+..+.++ ...+-+..+..|+.. +.. .+-.++ -.
T Consensus 46 i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~~~-a~e-vay~sYiys 120 (412)
T PF01770_consen 46 IYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS---VLAMQLMQFFYGLAT-AAE-VAYYSYIYS 120 (412)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHHHH-HHH-HHHHHHhee
Confidence 344555667777888899999999999999999999999999999999 999999999999943 444 467777 77
Q ss_pred cCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--CC-CC
Q 013378 135 NISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD--LT-RP 205 (444)
Q Consensus 135 ~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~-~~ 205 (444)
..|+++-.++.+....+..+|..++.++|..+ +.+....+..... ...++..+++|.+++..--++ +. +.
T Consensus 121 ~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~-~~a~~~~~fLP~~~~S~~f~r~~~~~~~ 199 (412)
T PF01770_consen 121 VVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV-SLALLIALFLPMPKRSLFFHRKPPAEQD 199 (412)
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHcCCCCcccceeccCccccc
Confidence 77889889999999999888888888888764 3455555555443 333444456887654321110 00 00
Q ss_pred ccccccccccc-CCCC----CCCcCCccccCCchH---HHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhc--
Q 013378 206 IITEETEGVNQ-NESN----SPVKIPVCKKIPSIR---DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-- 275 (444)
Q Consensus 206 ~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 275 (444)
..+.+.+..++ +++. ++...........++ +.++...++|.++...+-..+...++....++.....++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~ 279 (412)
T PF01770_consen 200 ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP 279 (412)
T ss_pred cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 00000010000 0000 000001111111122 2233345677777766666666666665555555554443
Q ss_pred cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH--HHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhh
Q 013378 276 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL--SLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 352 (444)
Q Consensus 276 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 352 (444)
-+-...-.|.+-+...+.+.++. +..|++..++.+..-+ ....++.+..++++...++.|..+. .++++.......
T Consensus 280 ~~~~~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fli 358 (412)
T PF01770_consen 280 SDNESVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLI 358 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 12233345777777777777776 5557875555553333 3334445566677778888888877 455566666677
Q ss_pred HHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHh
Q 013378 353 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 386 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 386 (444)
+....-+++...++.-|.++|+.+....+-+.+-
T Consensus 359 TiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 359 TIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 7777777777888888999998887766555443
No 130
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.53 E-value=8.5e-11 Score=108.65 Aligned_cols=371 Identities=13% Similarity=0.082 Sum_probs=211.7
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|..+.++...++...+..+..-..|.++.+.... + ....+...-.-.+..++.++..|.+.||..|.++...+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~-----s--Ll~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPG-----S--LLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----C--cHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 4567788899999999988888888888776311 1 12234444455677788999999999999999988877
Q ss_pred HHHhHHHHHHHH------hcc-C-----chhhHHHHHHHHhhhhcccchhhhhhhhh-hccC------ChhhhhHHHHHH
Q 013378 88 LTLSIIPLAILA------YRR-S-----ISFFYAYYALRTLTAMVCEGSINCLALAY-ADNI------SERQRASAFGIL 148 (444)
Q Consensus 88 ~~~~~~~~~~~~------~~~-~-----~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~------~~~~r~~~~~~~ 148 (444)
.+..-++..+.+ +.. + ......+++.-.+.|.-..-.......+. .||. +++++.+.++.+
T Consensus 75 l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~m 154 (432)
T PF06963_consen 75 LVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHH
Confidence 765543332222 111 1 11123333333333331111122223344 7775 355677788888
Q ss_pred HHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhc----cCCCCCCCCCCCCCCcccccccccccCCCC
Q 013378 149 LGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFL----KDDVPNDDDDDLTRPIITEETEGVNQNESN 220 (444)
Q Consensus 149 ~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (444)
.-.-.+..+++|++.|.+ +.+....+.+...++..+.=++++ +..|.-..++++.++......++..+++..
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~ 234 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSD 234 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccch
Confidence 777788889999988875 344444444444444433322222 222221111110000000000000000000
Q ss_pred CCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHH
Q 013378 221 SPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLL 300 (444)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 300 (444)
....+...+.....++.++...+++.+...+...+++.. .-++...+..|+..+ |+++...|..-+...+.++.+. +
T Consensus 235 ~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT-~ 311 (432)
T PF06963_consen 235 PSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGT-W 311 (432)
T ss_pred hhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH-H
Confidence 000000001111223335556677766665555544443 445677888999888 9999999999999999999987 6
Q ss_pred HHHHHhhhhCchhHHHHHHHHHHHHHHH----hhhccCC--chHHHHHHHH-----hhhhhhhHHHHHHHhhccCCCcch
Q 013378 301 FMPLLAPILGEAKLLSLGLFAACINMFI----CSISWSA--WVPYATTAFS-----VLVVFATPSFRSIVSKQVGPNEQG 369 (444)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~g 369 (444)
..+++.+|+|..+.-..+......++.+ +....++ ..-...++.| +|.-..-.....+++|.+|+++||
T Consensus 312 ~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg 391 (432)
T PF06963_consen 312 VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERG 391 (432)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhh
Confidence 6699999999888776666644433322 2222222 1111122222 333344466667789999999999
Q ss_pred hHHHHHHHHHHHHHHHhHH
Q 013378 370 KAQGCISGISSFANIVSPL 388 (444)
Q Consensus 370 ~~~g~~~~~~~~g~~~~~~ 388 (444)
+..|.-+..+++...+.-.
T Consensus 392 ~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 392 AVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999987766543
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.52 E-value=7e-13 Score=131.21 Aligned_cols=138 Identities=23% Similarity=0.143 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh
Q 013378 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (444)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (444)
..+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++ ...+++.+++.|++. +...+...++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s---~~~ll~~~~l~g~~~-~~~~~~~~a~ 672 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS---ESAMIALLCLFGGLS-IAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 345566778999999999999999999999999999999999999999888 777788888888844 5566778889
Q ss_pred -hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh---hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 013378 133 -ADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 133 -~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 195 (444)
+|++|.++|++++|+......+|.++||.+++.+ +...+|++.+++.++..++ ..++||+..
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll-~~~LPET~~ 738 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLL-ALKLPDTRG 738 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhCCCCcc
Confidence 9999999999999999999999999999998764 3356777777765554444 446788653
No 132
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.52 E-value=6.6e-13 Score=128.30 Aligned_cols=167 Identities=15% Similarity=0.121 Sum_probs=113.2
Q ss_pred HHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHH--
Q 013378 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI-- 97 (444)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~-- 97 (444)
...........+|.+.++.. +.+....++..+...++..++.+..|+++||+|||+++..+.++..++...
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~-------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNL-------HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 33445555667788775532 233344566777888999999999999999999999988877654433322
Q ss_pred -HHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----hhHH
Q 013378 98 -LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTS 170 (444)
Q Consensus 98 -~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----~~~~ 170 (444)
...+++ ...+++++++.|++. +...+....+ .|.+|++.|+++++.......++..++|.+.+.+ +|+.
T Consensus 335 ~~~~~~~---~~~~~~~~~~~g~~~-~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 335 ILINSNV---IGLIFAGLLMLAVIL-NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred HHHhCCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 223344 677788899888743 4444556677 9999999999999975444445556777776653 3677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013378 171 AFQAATIVSMLAAAYMRVFLKDDVPNDD 198 (444)
Q Consensus 171 ~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 198 (444)
+++...+.+++..+ ..+++||++++..
T Consensus 411 ~~~~~~~~~~i~~~-~~~~~pes~~~~~ 437 (490)
T PRK10642 411 PAYYLMVVAVIGLI-TGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHhccccCCCC
Confidence 77666655544444 4456799987644
No 133
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.51 E-value=8.5e-13 Score=124.57 Aligned_cols=154 Identities=12% Similarity=0.166 Sum_probs=124.9
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CchhHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFA 321 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 321 (444)
+++.++..+...+...+.+++...++|.|+++.+|+++.+.+.+.........++. +.+|+++||+ |||+.+..+.++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHH
Confidence 34666677777777888888999999999998899999999999888888878875 6779999999 999999999999
Q ss_pred HHHHHHHhhhccC-CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCC--cchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 322 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..++.+++....+ ....+. ..+..++.+...+...+++.|.+|++ +|.+++++.+...++|+.++|.+.|++.+..
T Consensus 86 ~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~ 165 (493)
T PRK15462 86 MAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY 165 (493)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888776654332 222222 33445666666787888999999976 6899999999999999999999999998765
No 134
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.51 E-value=5.4e-13 Score=124.13 Aligned_cols=146 Identities=14% Similarity=0.143 Sum_probs=122.3
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 329 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
+....++..+........+|.|..+. +.++.+.+++.+...++..+.+ ...|+++||+|||+.+..+..+..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLS-PIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHH-HhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 45566666666667777888888774 8999999999999999999997 555899999999999998888877776666
Q ss_pred hhcc-----CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 330 SISW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 330 ~~~~-----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+.. +.+..+. .++.|++.+...+...+++.|..|+++|+++.|..+....+|..++|.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6555 5555554 566788888889999999999999999999999999999999999999999998865
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.49 E-value=5.5e-13 Score=126.42 Aligned_cols=158 Identities=15% Similarity=0.069 Sum_probs=125.6
Q ss_pred HHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHH
Q 013378 238 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (444)
++.++++|.++...+..++..+.........|.+.++. +.++.+.|...+...+...+++ ...|++.||++||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~-~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGL-MVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHH-HhhHHHhhhcCCceEEEe
Confidence 34466788888878888888887777778888887665 7799999999999999999997 555899999999998887
Q ss_pred HHHHHHHHHHHhhh-----ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 318 GLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 318 ~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
+..+.+++...... .++.+..+. .++.|++.+...+...+.+.+.+|+++|+++.++.+...++|..+||.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g 167 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGG 167 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHH
Confidence 77766665544332 223333333 455577777778888899999999999999999999999999999999999
Q ss_pred HHHHhh
Q 013378 392 PLTALF 397 (444)
Q Consensus 392 ~l~~~~ 397 (444)
.+.+..
T Consensus 168 ~l~~~~ 173 (417)
T PRK10489 168 LLIAAG 173 (417)
T ss_pred HHHHHH
Confidence 998865
No 136
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.49 E-value=1.1e-12 Score=123.13 Aligned_cols=142 Identities=14% Similarity=0.080 Sum_probs=118.2
Q ss_pred HHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc
Q 013378 254 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW 333 (444)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444)
.+.............|.+. +.+|.++.+.++..+...++..+++ +..|++.||+|||+.+..+..+..++.+.....+
T Consensus 14 ~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQ-LLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHHHHHhcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3333444444455566655 4569999999999999999999997 5558999999999999999999888888888877
Q ss_pred CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 334 SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 334 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.+.... .++.|++.+...+...+++.|.+|+++|+++.|+.+....++..++|.+.+.+.+..
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7666655 567788888889999999999999999999999999999999999999999888764
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.49 E-value=1.2e-12 Score=123.81 Aligned_cols=169 Identities=20% Similarity=0.245 Sum_probs=132.7
Q ss_pred HHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHH
Q 013378 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (444)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 96 (444)
.+......+...+.+|.|..+.. .+. +......+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELA---GNV-SNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 33444555666778888877652 111 11223457777888889999999999999999999999999888888887
Q ss_pred HHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHH
Q 013378 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSA 171 (444)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~ 171 (444)
...+.++ .+.+++.+++.|+ +.+...+...++ .+..|+++|++.+++.+....+|..+||.+++.+ +|+..
T Consensus 304 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~ 379 (408)
T PRK09874 304 PMSFVQT---PLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAV 379 (408)
T ss_pred HHHHhcc---HHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHH
Confidence 7777777 7888889999999 446677778888 8889999999999999999999999999998874 78999
Q ss_pred HHHHHHHHHHHHHHHHHhccCC
Q 013378 172 FQAATIVSMLAAAYMRVFLKDD 193 (444)
Q Consensus 172 f~~~~~~~~~~~~~~~~~~~e~ 193 (444)
|++.+++.++..+..++..+++
T Consensus 380 f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 380 FLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888777666665544443
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=1.7e-12 Score=121.99 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=112.0
Q ss_pred HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHH
Q 013378 266 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAF 344 (444)
Q Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 344 (444)
...|.+ .+.+|.|+.+.++..+...++..+++ ...|++.||+|||+.+..+..+..++.+...+.++.+.++. -++.
T Consensus 30 ~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 107 (390)
T PRK03545 30 GLLSDI-AQSFHMQTAQVGLMLTIYAWVVALMS-LPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGI 107 (390)
T ss_pred cchHHH-HhHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 345554 45679999999999999988888887 44589999999999999999999999888888888777666 4566
Q ss_pred HhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 345 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
|++.+...+...+++.|..|+++|+++.|+.+....+|..++|.+.+.+.+..
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~ 160 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL 160 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 77777788889999999999999999999999999999999999999988765
No 139
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.48 E-value=2.9e-12 Score=121.90 Aligned_cols=146 Identities=11% Similarity=0.128 Sum_probs=121.2
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 329 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
.++..+...+.........|.+.++ +|+|+.+.+++.+...++..+++ +..|++.||+|+|+.+..+.++..++.++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSK-FVSGIVSDRSNARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence 3444444444444556677777765 69999999999999999999997 555899999999999999999999998888
Q ss_pred hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 330 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 330 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+.++.+.... .++.+++.+...+...+++.+.+|+++|++++|+.+....+|..++|.+.+.+.+..
T Consensus 106 ~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 106 GFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88877766555 455677788778889999999999999999999999999999999999999998764
No 140
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=5e-13 Score=126.80 Aligned_cols=163 Identities=12% Similarity=0.028 Sum_probs=126.6
Q ss_pred HhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc
Q 013378 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (444)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (444)
.......|.+..+.. .+.+.+..+.|++.++..++..++.++.|+++||+|||+.+..+.++.+++..+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~- 314 (420)
T PRK09528 240 DVFDQQFPNFFASFF----ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG- 314 (420)
T ss_pred HHHHHHHHHHHHHHH----hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc-
Confidence 333334666665542 222344467799999999999999999999999999999999999999999888889888
Q ss_pred hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHH-HHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHH
Q 013378 105 SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGI-LLGVLSASFVCGTLAARFL----STTSAFQAATIV 178 (444)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~-~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~ 178 (444)
.+.+++.+++.|+ ..+...+....+ .|..|++.|+...+. ++....+|.+++|.+.+.+ ||+..|.+.+++
T Consensus 315 --~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~ 391 (420)
T PRK09528 315 --PLEVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGI 391 (420)
T ss_pred --HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Confidence 8888899999998 435555566778 898999888887655 6677889999998888774 899999988887
Q ss_pred HHHHHHHHHHhccCCCC
Q 013378 179 SMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 179 ~~~~~~~~~~~~~e~~~ 195 (444)
.++..++.++.++++++
T Consensus 392 ~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 392 VLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHhcCCch
Confidence 76666666666665443
No 141
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=121.30 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+.++......++...........+|.|+++++|.|..+.|...+...+...+.+ ...|+++||+|||+.+..+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTR-GYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHh-hhhhHHHHhhcchHHHHHHHHHHHH
Confidence 455555566666666666667788888888889999999999999999999998 5558999999999999888777665
Q ss_pred HHHHhh---hc-----cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 325 NMFICS---IS-----WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 325 ~~~~~~---~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
+.+... .. .+.+.+++ -++.|++.+...+...++..|..|+++|+++.|..+.....+..++|.+.+.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 543221 11 12233333 4567888887888888899999999999999999999999999999999998877
Q ss_pred hh
Q 013378 396 LF 397 (444)
Q Consensus 396 ~~ 397 (444)
..
T Consensus 174 ~~ 175 (392)
T PRK12382 174 HF 175 (392)
T ss_pred cc
Confidence 54
No 142
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.47 E-value=2.9e-12 Score=120.19 Aligned_cols=133 Identities=12% Similarity=0.050 Sum_probs=115.2
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-H
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 341 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (444)
.....+|.+.+ .+|+++.+.+...+...+...+++.+. |++.||+|||+.+..+.++.+++.+...+.++.+..+. -
T Consensus 38 ~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~-g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 38 LPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFI-TQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 33445666654 569999999999999999999997444 89999999999999999999998888888777777666 5
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
++.|++.+...+...+++.|.+|+++|+++.++.....+++..++|.+.+.+.+..
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~ 171 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI 171 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 67789988889999999999999999999999999999999999999999998765
No 143
>PRK10504 putative transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=124.41 Aligned_cols=151 Identities=13% Similarity=0.036 Sum_probs=127.0
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+.++......++...........+|.+.++ +|.++.+.++..+...++..++. ...|+++||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVML-PASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 456666677777777777778889998876 69999999998888888888886 5668999999999999988888888
Q ss_pred HHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 325 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.+...+.++.+..+. .++.|++.+...|...+.+.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~ 161 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc
Confidence 7777777666665555 567788888889999999999999999999999999999999999999999998864
No 144
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.47 E-value=1.3e-12 Score=123.15 Aligned_cols=154 Identities=14% Similarity=0.055 Sum_probs=125.5
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
.++++..+.+..++..+........+|.++++.+|.|+.+.|...+...+...+.+ ...|++.||+|||+++..+.+..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSR-PHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhc-hhhHhHHhccCCcchHHHHHHHH
Confidence 35667777888888888877788899999988889999999999999999999998 55589999999999999988877
Q ss_pred HHHHHHhhhc---cC-----CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 323 CINMFICSIS---WS-----AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 323 ~~~~~~~~~~---~~-----~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
.++.+..... ++ .+.++. -++.|++.+...+...++..|..|+++|+++.++......+|..++|.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 6654443322 22 112222 46678888888888889999999999999999999999999999999999998
Q ss_pred HHhh
Q 013378 394 TALF 397 (444)
Q Consensus 394 ~~~~ 397 (444)
.+..
T Consensus 172 ~~~~ 175 (399)
T PRK05122 172 YHWG 175 (399)
T ss_pred HHcc
Confidence 8764
No 145
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.47 E-value=5.7e-12 Score=118.95 Aligned_cols=128 Identities=8% Similarity=-0.051 Sum_probs=112.7
Q ss_pred HHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHH
Q 013378 267 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFS 345 (444)
Q Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 345 (444)
.....+++++|++..+.++..+...++..+++ +..|++.||+|||+.+..+.++..++.+...+.++.+.++. -++.|
T Consensus 29 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 107 (412)
T TIGR02332 29 FAGLTMGKDLGLSATMFGLAATLFYAAYVICG-IPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVG 107 (412)
T ss_pred HHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 33346777889999999999999999999998 55589999999999999999999999988888888776665 56779
Q ss_pred hhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 346 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
++.+...|....++.|.+|+++|+++.|+.+....+|..+++.+.+.+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 108 IAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998889999999999999999999999999999999999999998875
No 146
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.47 E-value=3.7e-12 Score=119.43 Aligned_cols=149 Identities=15% Similarity=0.159 Sum_probs=121.0
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
+|.++.+.+..++..+.........+...+ .+|.++.+.++..+...+...+.. ...|++.||+|||+++..+..+..
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~-~~~G~laDr~grr~vl~~~~~~~~ 79 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLA-PFVGAFADSFPKGRVMFIANGIKL 79 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHH-hhhhHhhhccCCchhhHHHHHHHH
Confidence 355666777777777665555555555554 458888888999999999999987 555899999999999999998887
Q ss_pred HHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 324 INMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++.+.+.+..+. ...-++.|++.+...|...+++.|.+|+++|++++|+.+....++..+||.++|.+.+.
T Consensus 80 ~~~~~~~~~~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 80 LGCLLMLFGIHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665554443 33345679999999999999999999999999999999999999999999999999986
No 147
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.46 E-value=2.8e-12 Score=122.88 Aligned_cols=154 Identities=15% Similarity=0.082 Sum_probs=129.5
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 321 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (444)
++|.++..+...+...+.+++...+++.|+++.+|++..+.++..........+.. ..+|+++|| +|||+++..+.++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHHHHH
Confidence 35667777778888889999999999999999999999998888877776666664 567999999 9999999999999
Q ss_pred HHHHHHHhhhccCCch-HH-HHHHHHhhhhhhhHHHHHHHhhccCCCc--chhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 322 ACINMFICSISWSAWV-PY-ATTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..++.+.+.+..+... ++ ...+.+++.+...|...+++.|.+|+++ |++++++.+...++|..+||.+.|++.++.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999888887665333 32 2566688888889999999999998874 478999999999999999999999998876
No 148
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.46 E-value=2.5e-12 Score=120.38 Aligned_cols=151 Identities=13% Similarity=0.047 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+.++......+............+|.+.+ ++|.+..+.++..+...++..+++ ...|++.||+|||+.+..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH-DVGISIPAAGHMISYYALGVVVGA-PIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH-HcCCCHHHHhHHHHHHHHHHHHHH-HHHHHHHccCccHHHHHHHHHHHHH
Confidence 45556666666676666666777777664 469999999999999999999998 5558999999999999999999999
Q ss_pred HHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 325 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.++..+.++.+.++. .++.|++.+...+.......|..|+++|+++.+.......++..++|.+.+.+.+..
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 9998888888777766 567788888878888888899999999999999999999999999999999887754
No 149
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.46 E-value=5.1e-12 Score=113.97 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
..++.+.+..|......+.....+|...+| +|.|..++|...+.++.+..++..+. ..+.||+.||+++.....+..+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l-~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLL-ALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHcccchHHHHHHHHHHHHH
Confidence 455667777888888888888889888866 59999999999999999999998666 6999999999999999999999
Q ss_pred HHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCC
Q 013378 325 NMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 403 (444)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 403 (444)
+.++..+.++++.+.+ =++.++..+..++...+...+.+|+++|+++.++......++..+|.+++.++-|.+ +.+.
T Consensus 91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~- 168 (394)
T COG2814 91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRA- 168 (394)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHH-
Confidence 9999999999988877 578899999999999999999999999999999999999999999999999999987 5554
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 404 FNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
.|.+.+.+.++..+..+...|
T Consensus 169 ------~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 ------TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHhCC
Confidence 335666666666666655544
No 150
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.45 E-value=5.9e-12 Score=117.85 Aligned_cols=151 Identities=9% Similarity=0.005 Sum_probs=130.0
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
++.++.+....++...........+|.|.++ +|.|..+.|+..+...++..+++ ...|++.||+|||+.+..+..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~-~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGT-LLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557777788888888888888999999876 59999999999999999999997 555899999999999999999999
Q ss_pred HHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 324 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++.....+.++.+..+. .++.|++.+...|...+...+..++++|+++.|..+...++|..+||.+.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888888777766655 56678888888888888888888999999999999999999999999999888764
No 151
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.44 E-value=1.1e-11 Score=115.58 Aligned_cols=149 Identities=17% Similarity=0.161 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
++......+...........+.|.++++.+|+|+.+.++..+...++..++. +..|++.||+|||+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3444555555566666667778877888889999999999999999999997 555899999999999999999999998
Q ss_pred HHhhhcc-CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 327 FICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 327 ~~~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+...+.+ +.+..+. .++.|++.+ ..+....++.+.+|+++|+++.++.....++|..+++.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8888877 7666555 455677644 44566788999999999999999999888999999988888777643
No 152
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.44 E-value=2.1e-11 Score=113.93 Aligned_cols=148 Identities=15% Similarity=0.106 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
|.++...+................+.+.++.+|+|+.+.+++.++..+...+.+... |++.||+|.|+++..+.++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~-G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPY-SFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCChHHHHHHHHHHHH
Confidence 455554444444444444444445555554689999999999999999999998444 8999999999999999998888
Q ss_pred HHHHhhhc-----cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 325 NMFICSIS-----WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 325 ~~~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
..+...+. ++.+.+++ .++.|++ +..++.....+++.+|+++||++.|+....+++|..+++.+...+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88877765 45555555 5666776 6678888999999999999999999997777777776666555433
No 153
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.6e-12 Score=115.89 Aligned_cols=168 Identities=12% Similarity=0.075 Sum_probs=130.5
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhh
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 330 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
.+....+.+.--.+..-.|.. .+..++|.++.|.+.+...+..-++. ++.|.++||.++|..+..+++++++..++++
T Consensus 35 fiGYa~fYl~RknF~~a~p~l-~e~~~lsk~~lG~i~s~f~i~YG~sK-f~~G~~sDr~npr~fm~~gLilsai~nil~G 112 (448)
T COG2271 35 FIGYAAFYLTRKNFNLAMPAL-IEDGGLSKTQLGILGSAFSITYGVSK-FVMGVLSDRSNPRYFMAFGLILSAIVNILFG 112 (448)
T ss_pred HHHHHHHHHHHHhHhhccHHH-HHhcCCCHHHHHHHHHHHHHHHHHHH-HHhhhhcccCCCceeehHHHHHHHHHHHHHh
Confidence 333333334333444445544 45558999999999999999999998 5668999999999999999999999999999
Q ss_pred hccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHH--HHHHHhhhhcCCCcccc
Q 013378 331 ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF--SPLTALFLSKGAPFNFP 407 (444)
Q Consensus 331 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~~~~~~~~~~~~ 407 (444)
+.++.+.+.+ ..+-|.+.+...|.....+..-+|+++||+..|+-|+..++|+.+.|.+. +.+.++. +.+.
T Consensus 113 fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~----- 186 (448)
T COG2271 113 FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRA----- 186 (448)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhH-----
Confidence 9987776665 56679999999999999999999999999999999999999999999999 7777654 3333
Q ss_pred hhHHHHHHHHHHHHHHHHHhc
Q 013378 408 GFSIMCIGLASMVAFIQSLMM 428 (444)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~ 428 (444)
.|++-++++++..++.++.
T Consensus 187 --~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 187 --AFYFPGIIAIIVALILLFL 205 (448)
T ss_pred --HHHHHHHHHHHHHHHHHHH
Confidence 3344554444444444433
No 154
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.44 E-value=6.4e-12 Score=121.11 Aligned_cols=154 Identities=14% Similarity=0.070 Sum_probs=122.6
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 321 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (444)
+++.++..+...++..+.++....+++.|+++.+|++..+.+.............. ..+|+++|| +|||+.+..+..+
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchHHHHHHHHHH
Confidence 34567788888888888888999999999999999999888777766554444443 566999999 5999999999999
Q ss_pred HHHHHHHhhhccC-CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc--chhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 322 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..++..++.+..+ .+..+. ..+.+++.+...+...++..+.+|+++ +..+.++.+...++|..++|.+.|++.+..
T Consensus 98 ~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~ 177 (500)
T PRK09584 98 LAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY 177 (500)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9888887776543 333333 456788888888888899999998654 456788889999999999999999998865
No 155
>PRK11043 putative transporter; Provisional
Probab=99.43 E-value=6.5e-12 Score=118.50 Aligned_cols=145 Identities=16% Similarity=0.083 Sum_probs=114.9
Q ss_pred HHHHHHHhhhcchhHHHHHH--HhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh
Q 013378 252 VVAFFSGLSEGGMQASFLYF--LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 329 (444)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
...+.....+.....+.|.+ +++.+|.++.+.++..+...++..+++ +..|++.||+|||+.+..+..+..++.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQ-LLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 33333333444444555544 456679999999999999999999997 556899999999999999988888888877
Q ss_pred hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 330 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 330 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+.++.+.... .++.|++.+...+...+...|.+|++++++..+..+....++..++|.+.+.+.+..
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77777666555 456677777777777888999999999999999999899999999999999998764
No 156
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.43 E-value=2.1e-11 Score=117.23 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=101.0
Q ss_pred hHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHH
Q 013378 265 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTA 343 (444)
Q Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 343 (444)
....|. +++.+|++..+.+...+...++..+++ +..|+++||+|+|+.+..+.+...++.++..+.++.+.++. .++
T Consensus 56 ~~~~~~-l~~~~gls~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l 133 (476)
T PLN00028 56 APLLPI-IRDNLNLTKSDIGNAGIASVSGSIFSR-LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 333444 456679999999998888888888886 55689999999999999988888888888887777666554 455
Q ss_pred HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 344 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
.|++.+... ....++.+.+|+++||++.|+.+...++|..+++.+.+.+.+.
T Consensus 134 ~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 134 IGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 676665443 3456788999999999999999998889999888877766554
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.43 E-value=8.1e-12 Score=118.04 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 327 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
....+..+...+.........|.+ ++.+|.++.+.++..+...++..+++ ...|++.||+|||+.+..+..+..++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 92 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGA-LMFGLWGDRYGRRLPMVTSIVLFSAGTL 92 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 334444444454444445555554 56679999999999999999999997 5558999999999999999988888888
Q ss_pred HhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 328 ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 328 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
...+.++.+..+. .++.|++.+...+...+++.|..|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 93 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 93 ACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888777766655 567788888889999999999999999999999999999999999999999888764
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.42 E-value=6.7e-12 Score=121.63 Aligned_cols=150 Identities=14% Similarity=0.058 Sum_probs=123.9
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 329 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
..+..+.............|.+.++ +|.+..+.++..+...++..++. ...|++.||+|||+.+..+..+..++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISI-PLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHH-HhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3444444445444556667766654 69999999999999999999997 556899999999999999999999999888
Q ss_pred hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCC
Q 013378 330 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 402 (444)
Q Consensus 330 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 402 (444)
...++.+..+. .++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.|.+.++. +.++
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~ 157 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRW 157 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Ccee
Confidence 88887776665 566788888889999999999999999999999999999999999999999998765 4443
No 159
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.42 E-value=8.4e-12 Score=120.72 Aligned_cols=149 Identities=16% Similarity=0.089 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
+..+.+..+....-.......+|.+.++ +|.+..+.++..+.+.++..... +..|+++||+|||+.+..+..+..++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~-~~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMV-LPMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3344455555555555556667877654 69999999999999988888886 556899999999999999999999999
Q ss_pred HHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhcc-CCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 327 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 327 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+.....++.+.++. -.+.|++.+...|.....+.+.+ |+++|+++.|+......+|..+||.+.|.+.++.
T Consensus 86 ~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 86 LAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99998888777766 46778888888888887776665 6789999999999999999999999999998875
No 160
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.42 E-value=1.1e-11 Score=116.63 Aligned_cols=150 Identities=11% Similarity=0.071 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHH
Q 013378 246 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 325 (444)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (444)
.+.......+............+|.+.++ +|.+..+.+...+...++..+++ ...|+++||+|||+.+..+.....++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAM-LFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 33344444455555555555667776655 69999999999999888888887 55589999999999999999888888
Q ss_pred HHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 326 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.......++.+..+. .++.|++.+...+...+++.|.+|+++|+++.+..+....++..++|.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 82 SLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 888877776655544 466688888888888999999999999999999999999999999999988877643
No 161
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=1.1e-11 Score=116.41 Aligned_cols=148 Identities=12% Similarity=0.022 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
.+...+..++...........+|.+. +.+|+|..+.+...+...++..+++ +..|++.||+|||+.+..+..+..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISI-FLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33334444444444444555566655 5579999999999999999988987 566899999999999999998888888
Q ss_pred HHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 327 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 327 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++..+.++.+..+. .++.|++.+...+...+.+.|.+|+++|+++.+..+....+++.++|.+.+.+.+.
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888777665554 56678888878888888999999999999999998888899999999998887654
No 162
>TIGR00895 2A0115 benzoate transport.
Probab=99.41 E-value=1e-11 Score=116.99 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=114.5
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-H
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 341 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (444)
......|.+. +.+|.++.+.+++.+...++..++. +..+++.||+|||+.+..+..+..++.++....++.+..+. .
T Consensus 35 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (398)
T TIGR00895 35 AMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGA-LFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILR 112 (398)
T ss_pred HHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH-HHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 3344455544 5579999999999999999988887 55589999999999999999888888888887777666555 5
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCC
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 402 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 402 (444)
++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.. +.+.
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~ 172 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRS 172 (398)
T ss_pred HHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-ccee
Confidence 67788888889999999999999999999999999999999999999999998765 4433
No 163
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.40 E-value=1.4e-12 Score=124.71 Aligned_cols=163 Identities=14% Similarity=0.140 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc--CchHHHHH-
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLTL- 86 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l~~- 86 (444)
++......++..++.......+|.|.++. +.+..+.+++.++..++..++.++.|+++||. ++|+...+
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKDK--------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 44444455555555555556677776442 45557788999999999999999999999984 34443333
Q ss_pred -HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 87 -PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
+....+++.++..+.++ ++.+++.+++.|+ +.+...+...++ .|.+|++++++.+++++...++|..+||.+++
T Consensus 315 ~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~-~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 315 FALLFNGLTHLLCALAGD---YTGLVIYCIFFGL-SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHHHHHHHhch---HHHHHHHHHHHHH-HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 33444455556667777 8888889999999 446666778888 99999999999999999999999999999988
Q ss_pred hh-----hhHHHHHHHHHHHHHHHH
Q 013378 165 FL-----STTSAFQAATIVSMLAAA 184 (444)
Q Consensus 165 ~l-----~~~~~f~~~~~~~~~~~~ 184 (444)
.+ +|++.|++.+++.++..+
T Consensus 391 ~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 391 RLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeehhcCCcchHHHHhhHHHHHHHH
Confidence 64 488898888776554433
No 164
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.40 E-value=1.3e-11 Score=115.95 Aligned_cols=162 Identities=15% Similarity=0.150 Sum_probs=117.9
Q ss_pred HHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHH
Q 013378 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (444)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (444)
+............+|.+.++.. +.+..+.|++.+...+...++.++.|+++||+|||+.+..+.....+....
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~~~-------~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIINEL-------HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 3333334445566777775542 344466788777777888889999999999999999888777666655555
Q ss_pred HHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHH
Q 013378 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAF 172 (444)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f 172 (444)
..+.++ .+.+++.+++.++ ..+...+....+ .|..|+ +|+++.++++...++|..+||.+++.+ +|+..|
T Consensus 299 ~~~~~~---~~~~l~~~~l~~~-~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~ 373 (393)
T PRK15011 299 MLMAHS---PAILLGLQLLNAI-YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVF 373 (393)
T ss_pred HHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 555666 6777788888877 335555566677 888875 699999999998999999999888773 789999
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q 013378 173 QAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~e 192 (444)
++.+++.++..+ ..++.||
T Consensus 374 ~~~~~~~~~~~~-~~~~~~~ 392 (393)
T PRK15011 374 WFALVMIIATLF-CLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHH-HHHhhcC
Confidence 887777655444 4445565
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.40 E-value=4.4e-12 Score=119.35 Aligned_cols=127 Identities=12% Similarity=0.071 Sum_probs=112.4
Q ss_pred HHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhh
Q 013378 270 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLV 348 (444)
Q Consensus 270 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 348 (444)
.++++.+|.++.+.+++.+...++..++. +..|++.||+|||+.+..+..+..++.....+.++.+..+. .++.|++.
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQ-FPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAE 96 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHH-HhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 34566789999999999999999999997 55589999999999999999988888888888877776666 56778998
Q ss_pred hhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 349 VFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999888765
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=120.49 Aligned_cols=143 Identities=14% Similarity=0.104 Sum_probs=104.1
Q ss_pred HhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchh
Q 013378 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (444)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (444)
..+.+|.+.++. .+.+..+.+++.+...++..++.++.|+++||+|||+++..+..+..+..+......+..
T Consensus 294 ~~~~lp~~l~~~-------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 365 (496)
T PRK03893 294 IQALLPTYLKTD-------LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGAN- 365 (496)
T ss_pred HHHHHHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccH-
Confidence 345678877433 245557789999999999999999999999999999999888777666655444433211
Q ss_pred hHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHH
Q 013378 107 FYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIV 178 (444)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~ 178 (444)
.+...+..++.+..+.+. .+....+ .|.+|+++|++.+++......+|..+||.+++.+ +|+..+...+..
T Consensus 366 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 366 VWVLGLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 344444555544423233 3456678 9999999999999999999999999999988874 677776554433
No 167
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.7e-11 Score=114.66 Aligned_cols=168 Identities=13% Similarity=0.164 Sum_probs=122.2
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHH-HHHHHHHHHHHHh
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS-LGLFAACINMFIC 329 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 329 (444)
.+..++...........+|.|+++.+|.|+.+.|+..+...+...+.+.+ .|+++||+|||+.+. .+.....++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~-~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQL-LATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 34566667777777888999998889999999999999999888888755 489999999887654 4555556666666
Q ss_pred hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhH--HHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCccc
Q 013378 330 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKA--QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNF 406 (444)
Q Consensus 330 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 406 (444)
.+.++.+.++. ..+.+.+.+...|...++..|..|++.|+.+ .+......++|..++|.+.+.+.+.. +.+.
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~---- 156 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTV---- 156 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHH----
Confidence 77777665554 3455666666778888888888887777654 57778888999999999999998764 3322
Q ss_pred chhHHHHHHHHHHHHHHHHHh
Q 013378 407 PGFSIMCIGLASMVAFIQSLM 427 (444)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~ 427 (444)
.+.+.+++.++..+..++
T Consensus 157 ---~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 157 ---MFLTAALAFVLCGVLVWL 174 (375)
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 335555544444444433
No 168
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.1e-11 Score=114.67 Aligned_cols=166 Identities=23% Similarity=0.256 Sum_probs=138.9
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchH-HHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-MLTLPL 88 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~~~ 88 (444)
++...+..+.............|.+.++.. +.+..+.++..+...++..++.++.|++.||+|||+ .+..+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVL-------GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGL 249 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 344555556666667777778888875542 344567899999999999999999999999999999 999999
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
.+..++.....+.++ .+..++..++.|++. +...+...++ .|..|+++|++.+++.+...++|..++|.+.+.+
T Consensus 250 ~~~~i~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 250 LLAALGLLLLALAPS---LALLLVALLLLGFGL-GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-hccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988 888999999999944 6677888899 9999999999999999999999999999998874
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH
Q 013378 167 ---STTSAFQAATIVSMLAAAYM 186 (444)
Q Consensus 167 ---~~~~~f~~~~~~~~~~~~~~ 186 (444)
+|+..+.+.+++.++..+..
T Consensus 326 ~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 326 DTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred cccCcchHHHHHHHHHHHHHHHh
Confidence 78999998888866555443
No 169
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=1.4e-11 Score=116.56 Aligned_cols=155 Identities=19% Similarity=0.160 Sum_probs=117.2
Q ss_pred HHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc
Q 013378 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (444)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~ 101 (444)
.........+|.+.++. +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.....++..+..+.
T Consensus 234 ~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 234 IVLYFLLNWLPSLLVGQ--------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHHHHHHHHHHHHHhC--------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 33344444567776443 4444677888999999999999999999999999999988777777777777777
Q ss_pred cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-----hhHHHHHHH
Q 013378 102 RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAA 175 (444)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-----~~~~~f~~~ 175 (444)
++ .+.+.+..++.|++. +...+...++ .|.+|+++|++..++.+....+|..+||.+.+.+ +|...++..
T Consensus 306 ~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 381 (406)
T PRK11551 306 PS---FAGMLLAGFAAGLFV-VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGAS 381 (406)
T ss_pred Cc---HHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHH
Confidence 77 677777778888844 4455677888 9999999999999999999999999999999885 345556555
Q ss_pred HHHHHHHHHHHHH
Q 013378 176 TIVSMLAAAYMRV 188 (444)
Q Consensus 176 ~~~~~~~~~~~~~ 188 (444)
....++..+..++
T Consensus 382 ~~~~~~~~~~~~~ 394 (406)
T PRK11551 382 IPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 5554444443333
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.38 E-value=2.9e-11 Score=114.28 Aligned_cols=134 Identities=12% Similarity=0.110 Sum_probs=109.9
Q ss_pred cchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-
Q 013378 262 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA- 340 (444)
Q Consensus 262 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (444)
..+...+|.+. +++|.++.+.+...+...++..++. ...|++.||+|||+.+..+.....++.+.....++.+..+.
T Consensus 30 ~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 107 (406)
T PRK15402 30 DMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQ-WLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLL 107 (406)
T ss_pred hhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 33444555554 5579999999999999999988887 55589999999999999998888888887777777666555
Q ss_pred HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 341 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 341 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.++.|++.+...+...+.+.|.+|+++|+++.++......++..++|.+.+.+.+..
T Consensus 108 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 108 RFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 456677777777888889999999999999999988888899999999999888754
No 171
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=4.4e-11 Score=112.76 Aligned_cols=152 Identities=18% Similarity=0.142 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
+|.+....+..++..........+.+.+.++ +|.++.+.+...+...++..+++ ...|++.||+|||+.+..+..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISA-WISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4556666777777777777777788888866 59999999999999999999997 555899999999999999888887
Q ss_pred HHHHHhh---hc-cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHH-HHhHHHHHHHHHhh
Q 013378 324 INMFICS---IS-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALF 397 (444)
Q Consensus 324 ~~~~~~~---~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~ 397 (444)
++.+... .. .+.+..+. ..+.|++.+...+...+.+.+..|+++|++++|+.+...++|. .++|.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 7765432 22 23433333 4455777777777777888889999999999999999999986 57898888887754
No 172
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.38 E-value=1.2e-11 Score=115.75 Aligned_cols=133 Identities=13% Similarity=0.127 Sum_probs=114.3
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-H
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 341 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (444)
.....+|.+.++ +|.|+.+.+...+...++..+++ +..|++.||+|||+.+..+..+..++.....+.++.+..+. .
T Consensus 9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (377)
T PRK11102 9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQ-LFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR 86 (377)
T ss_pred HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 334567777765 69999999999999999999987 55589999999999999999999988888888777666555 5
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
++.|++.+...+...+++.|..|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66788888888899999999999999999999999999999999999999998864
No 173
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.37 E-value=9.3e-12 Score=116.35 Aligned_cols=163 Identities=16% Similarity=0.208 Sum_probs=121.0
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
..+.+....+...+.........+.+.++. +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 277 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYGQSL--------GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVF 277 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 334444444444444444444555554332 344456788899999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
.+.+++.++..+.++.. ...++...++.|++. +...+....+ .|.+|+++|+++.++.+....+|..++|.+.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 278 GISAVGMAAMLFIPMLN-DVLFLATVALVFFTW-GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHHHHHHHHHcccch-hHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877776521 233445667777744 4555566778 9999999999999999999999999999888764
Q ss_pred ---hhHHHHHHHHHHHHH
Q 013378 167 ---STTSAFQAATIVSML 181 (444)
Q Consensus 167 ---~~~~~f~~~~~~~~~ 181 (444)
||++.|.+.+++.++
T Consensus 356 ~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 356 TEIGFEYTFIVTGAFALT 373 (377)
T ss_pred hhhchhhHHHHHHHHHHH
Confidence 789999888766544
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=2.6e-11 Score=115.57 Aligned_cols=149 Identities=13% Similarity=0.062 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+.++...+...........+....| ++++. |.++.+.++..+...++..++. +..|++.||+|+|+.+..+.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSKGELGFALSAISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHHc-CCCHhHhHHHHHHHHHHHHHhh-hccchhhhccCCceehHHHHHHHHH
Confidence 3334333433333333333344445 45564 9999999999999999999997 5558999999999999888888888
Q ss_pred HHHHhhhcc----CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 325 NMFICSISW----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 325 ~~~~~~~~~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+.+.....+ +.+.... .++.|++.+...+.....+.|.+|+++|++++|+.+....+++.++|.+.+...+.
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 777665543 2222222 45567777777888888889999999999999999999999999999888766553
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.36 E-value=9.7e-11 Score=112.22 Aligned_cols=164 Identities=19% Similarity=0.196 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
+..++...++..+..+.+...+|.+.++.+ +.+....|++.+++.+|.+++++..+++.+|+++++.+..+.+
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l-------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~ 292 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVL-------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASL 292 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHh-------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHH
Confidence 333444444444444555667888886654 3444677999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--
Q 013378 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 166 (444)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l-- 166 (444)
+.+++.+..+++++ .+...+.-++.|+ +.....+...+. .+..|++.|||+++++++....+..+|.++.|.+
T Consensus 293 ~~a~~~~~lal~~~---~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 293 LFALALLLLALSPS---FWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHhcchH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8888889999999 445565667788 9999999999999999999888888888887775
Q ss_pred --hhHHHHHHHHHHHHHHHH
Q 013378 167 --STTSAFQAATIVSMLAAA 184 (444)
Q Consensus 167 --~~~~~f~~~~~~~~~~~~ 184 (444)
|-+..+.+.++..++..+
T Consensus 369 ~~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 369 HFGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HhCHHHHHHHHHHHHHHHHH
Confidence 557777776655434333
No 176
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.35 E-value=4.9e-11 Score=111.61 Aligned_cols=162 Identities=15% Similarity=0.095 Sum_probs=132.3
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.++...+..++...+.....+..|.+.++. +.+..+.|++.+...++..+..++.|++.||+|+|+.+.++
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~--------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~ 276 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAA--------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLIS 276 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHH
Confidence 4455556666666777777778888887543 45557788899999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHH-HHHHhhhhhHHHhHHh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILL-GVLSASFVCGTLAARF 165 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~ 165 (444)
.+...+.....+++++ .+.+++.+++.|+ ..+...+....+ .+. |+++|++..++++ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~-~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 277 AIACVGRWAIIGAIEA---FPLIFLLQILHCG-TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHHhHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8999999999999 558888888888 887 9999999999986 5678999999999988
Q ss_pred hhh---HHHHHHHHHHHHHH
Q 013378 166 LST---TSAFQAATIVSMLA 182 (444)
Q Consensus 166 l~~---~~~f~~~~~~~~~~ 182 (444)
+-. ...|++.+.++++.
T Consensus 352 l~~~~g~~~~~~~~~~~~~~ 371 (382)
T TIGR00902 352 IYPTLGAGTFVFMAIIAAAA 371 (382)
T ss_pred HHHhccHHHHHHHHHHHHHH
Confidence 622 25566666665443
No 177
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.34 E-value=7.2e-11 Score=111.11 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=113.4
Q ss_pred HHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc
Q 013378 253 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 332 (444)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (444)
...+...........+|.+. +.+|.|+.+.+...+...+...+++ ...|+++||+|||+.+..+.....++.+.....
T Consensus 16 ~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 93 (394)
T PRK11652 16 LVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQ-LFYGPLSDRVGRRPVILVGMSIFILGTLVALFA 93 (394)
T ss_pred HHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444566665 4569999999999999999999997 555899999999999999988888888877777
Q ss_pred cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 333 WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 333 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
++.+..+. .++.|++.+...+....+..|..++++++++.+..+....++..++|.+.+.+.+..
T Consensus 94 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77665555 466677777777888888888899899999999999999999999999999887754
No 178
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=5.5e-11 Score=110.02 Aligned_cols=134 Identities=9% Similarity=-0.156 Sum_probs=100.0
Q ss_pred hcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH
Q 013378 261 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 340 (444)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (444)
...+...+|.+. +++|.|+.+.|++.+...++..+++ +..|++.||+|||+++.........+.......++.+.++.
T Consensus 7 ~~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~g~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (368)
T TIGR00903 7 WVTFSPVLSLVA-EDIDVSKEELGLLAITYPAAFLALT-IPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLA 84 (368)
T ss_pred HHHHHhhHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 334455566665 4569999999999999999999998 55599999999988776555544444332222245544444
Q ss_pred -HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 341 -TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 341 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
-++.|++.+. .+...+...|.+|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 85 ~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~ 141 (368)
T TIGR00903 85 CQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG 141 (368)
T ss_pred HHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4666777775 4555666689999999999999999999999999999999888754
No 179
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=1e-10 Score=109.77 Aligned_cols=132 Identities=9% Similarity=-0.033 Sum_probs=113.9
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-H
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 341 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (444)
.....+|... +++|+|..+.++..+...++..+++ ...|++.||+|||+++..+..+.+++.+..++.++.+.++. -
T Consensus 27 ~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~-~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r 104 (393)
T PRK09705 27 SVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLA-LAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA 104 (393)
T ss_pred ccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 3455566655 5679999999999999999999887 55689999999999999999999999999999998777666 5
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
++.|++.+...+....++.+.+| ++|++++|..+.....|..+++.+.+.+.++.
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~ 159 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS 159 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67789988888888888898887 78999999999999999999999998887753
No 180
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.32 E-value=8.7e-11 Score=110.90 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=118.2
Q ss_pred hHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHH
Q 013378 265 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTA 343 (444)
Q Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 343 (444)
...+|. +.+.+|.+..+.+...+...++..+++ +..|+++||+|||+++..+..+..++.+.....++.+.+++ -++
T Consensus 36 ~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 113 (413)
T PRK15403 36 QPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQ-WLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFI 113 (413)
T ss_pred ccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344454 345679999999999999999999997 55689999999999999999998888888888887766655 466
Q ss_pred HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHH
Q 013378 344 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFI 423 (444)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (444)
.|++.+...+.......|.+|+++++++.++.+....++..++|.+++.+.+.. +.+. .|.+.++..++..+
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~-------~f~~~~~~~~i~~~ 185 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKV-------LFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHH-------HHHHHHHHHHHHHH
Confidence 677776666677778889999999999999999999999999999998888754 3322 34555555555544
Q ss_pred HHH
Q 013378 424 QSL 426 (444)
Q Consensus 424 ~~~ 426 (444)
..+
T Consensus 186 ~~~ 188 (413)
T PRK15403 186 GLL 188 (413)
T ss_pred HHH
Confidence 433
No 181
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=3.9e-11 Score=114.23 Aligned_cols=148 Identities=12% Similarity=0.071 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 327 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
....+..+...+.........|. +++.+|.++.+.++..+...++..+++ ...|++.||+|||+.+..+.+...++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 98 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGG-ALFGLLADKFGRKPLMMWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 33333444433433333344443 456679999999999999999999997 5558999999999999999999999988
Q ss_pred HhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 328 ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 328 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
...+.++.+..++ -++.|++.+..++....++.|..|+++|+++.++......+|..+++.+.+.+.+..
T Consensus 99 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 99 LSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 8888887766666 567788888889999999999999999999999999999999999998887776653
No 182
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=6.3e-11 Score=113.95 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=106.2
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhh-----ccCCch
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI-----SWSAWV 337 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 337 (444)
.+....|.+ .+.+|.+..+.|++.+...++..+++ +..|+++||+|+|+++..+.++.++..+.++. .++.+.
T Consensus 47 ~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 47 NFKAAQNDM-ISTYGLSTTELGMIGLGFSITYGVGK-TLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred ChhhhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHH-hhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 334445654 45679999999999999999999997 55589999999999998887777666655544 345554
Q ss_pred HHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 338 PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 338 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++. -++.|++.+...|...+++.+.+|+++||+++|+.+....+|..+++.+..++.+.
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 444 45678888888899999999999999999999999999999999999888776664
No 183
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=1.4e-11 Score=115.23 Aligned_cols=135 Identities=17% Similarity=0.187 Sum_probs=112.0
Q ss_pred hhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchH
Q 013378 259 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 338 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (444)
.....+....| ++++.+|.+..+.+++.+...++..++. +..|+++||+|||+.+..+..+..++.++..+.++.+..
T Consensus 9 ~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (379)
T TIGR00881 9 LVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISK-FVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVM 86 (379)
T ss_pred HhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhh-hhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 33334444455 4556679999999999999999999997 555899999999999999999999998888888877766
Q ss_pred HH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHH-HHHHHHH
Q 013378 339 YA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL-IFSPLTA 395 (444)
Q Consensus 339 ~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~-~~g~l~~ 395 (444)
++ .++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+
T Consensus 87 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 87 AALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 65 566788888889999999999999999999999999999999999994 5544444
No 184
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.30 E-value=1.7e-10 Score=108.60 Aligned_cols=148 Identities=11% Similarity=0.041 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHH
Q 013378 247 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 326 (444)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (444)
+.......+...+.........|.+ ++.+|.+..+.|++.+...++..+++ +..+++.||+|+|+.+..+..+.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~-~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMA-IPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3344455555555554445666655 66789999999999999999999997 556899999999999999999998888
Q ss_pred HHhhhc---cCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 327 FICSIS---WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 327 ~~~~~~---~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+++... ++.+..+. .++.|++.+...+..++++.+..|++++++..++.+....+|..++|.+.+.+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 775433 34444444 56779999999999999999999999999999999999999999999999988643
No 185
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.30 E-value=3.3e-11 Score=110.32 Aligned_cols=156 Identities=17% Similarity=0.172 Sum_probs=127.5
Q ss_pred HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHH
Q 013378 240 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (444)
.++.++....++....+.++......+++--+++|. +-.+...|......-.+.++. .+...++.+|+|+.+++..++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~-~ffs~klI~kiGHv~v~~lgL 443 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILF-YFFSFKLIEKIGHVNVMYLGL 443 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHH-HHHHHHHHHHhcccceeeehh
Confidence 345566666666677777777777778887788776 555555676555555555666 467789999999999999999
Q ss_pred HHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHH-HHHHHHHhHHHHHHHHHhh
Q 013378 320 FAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~ 397 (444)
.+..+-++.+....++|..+. -++-|+..+..+.+.-++++...||+.+.+++++.... ..+|..+|++++|.+.+.+
T Consensus 444 a~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 444 ACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred hHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 999999999999999999887 46779999999999999999999999999999998665 5789999999999999876
No 186
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.29 E-value=4.1e-11 Score=107.71 Aligned_cols=377 Identities=14% Similarity=0.106 Sum_probs=198.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccc----cCchHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM 83 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~ 83 (444)
+.+..+....+-..+++..-....|.|+.+. |.+ ..+.+.+--+..+...+.+|..|..+|| +||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l---Gvp-----hk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL---GVP-----HKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc---CCC-----cccccccccccccccceecccccccccccccccccccc
Confidence 3444555555666677777777888887665 333 2455666677788889999999999996 898887
Q ss_pred HHH-HHHHhHHHHHHHHhccCch--------------hhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhH-HHH
Q 013378 84 LTL-PLTLSIIPLAILAYRRSIS--------------FFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRAS-AFG 146 (444)
Q Consensus 84 l~~-~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~-~~~ 146 (444)
++. +....+++..+..++.+.. ....+++.-.+.-+ ++-..+..+.++ .|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~-A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDV-ANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHh-hhhhhhhhHHHHHHHhccChhhhhccch
Confidence 665 4455667777777664421 02334444444445 333455668889 99998777666 999
Q ss_pred HHHHHHHhhhhhHHHhHHhhhhHH--HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC-cccccccccccCCCCCCC
Q 013378 147 ILLGVLSASFVCGTLAARFLSTTS--AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRP-IITEETEGVNQNESNSPV 223 (444)
Q Consensus 147 ~~~~~~~lg~~~g~~l~~~l~~~~--~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 223 (444)
.+.....+|..+|..++++.+|+- +|.....+-+.+..+-..+..|-+-....+.+..+ ..++....++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~------- 255 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGT------- 255 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcc-------
Confidence 999999999999999998888743 33333332222222222222111110000000000 00000000000
Q ss_pred cCCccccCC-chHHHHHH-hccchhHHHHHHHHHHHHhhhcchhHHHHHHH-hhccCcCchhH----------------H
Q 013378 224 KIPVCKKIP-SIRDLICL-LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQF----------------A 284 (444)
Q Consensus 224 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~----------------~ 284 (444)
+.+.+..+. ...+.... ...+|.++.+++...+.+++...+..+...++ ++.|+-++... .
T Consensus 256 ~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~ 335 (498)
T KOG0637|consen 256 TARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGC 335 (498)
T ss_pred cccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccch
Confidence 000000000 01111111 23456777888888888877776655555443 33344332210 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH----------------------HH
Q 013378 285 DLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA----------------------TT 342 (444)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 342 (444)
+=+.+..+...+.+ ....++.||+|-|+.+..+.....++..+.....+.+.... .-
T Consensus 336 ~GL~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 22344455555555 34478999999554443333323333222222221111111 11
Q ss_pred HHHhhhhhhhHHHHHHHhhccCCC--cchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcC
Q 013378 343 AFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 401 (444)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 401 (444)
..+.-....+..-++..+....+. -+|...|+.|....+.+.+.....|.+.+..++.+
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~ 475 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN 475 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence 112112222222222222112222 23667778888888999999988899999874443
No 187
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.29 E-value=2.3e-10 Score=105.28 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=114.5
Q ss_pred chhHHHHHHHhhccCcCchh-HHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-
Q 013378 263 GMQASFLYFLKAQFHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA- 340 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (444)
....+...++.+.+|++.++ .|.++.....+..+.+ +.+|++.||+|.|+++..+.+...+..++.++.++.+.+.+
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566777788999999 9999999999999997 66699999999999999999999999999998877665555
Q ss_pred HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 341 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 341 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
-++.|++.+... ....++.+.+|+++|+++.|+.+....+|.++++.+.+++.
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999888 99999999999999999999999999999999999999843
No 188
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.27 E-value=2.2e-10 Score=109.64 Aligned_cols=121 Identities=15% Similarity=0.130 Sum_probs=95.4
Q ss_pred HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc----CCchHHH-
Q 013378 266 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVPYA- 340 (444)
Q Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 340 (444)
...| ++.+. |.+..+.+...+...++..+++ ...|+++||+|+|+++..+.++..++.+.+.+.. +.+..+.
T Consensus 50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~-~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 3344 55666 9999999999999999999997 5558999999999999999988888877776643 2333333
Q ss_pred HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 341 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 341 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
.++.|++.+...+.....+.+.+|+++|+++.|+.+....+|..+.+.+
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4566888877778778888899999999999999999988887544434
No 189
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.27 E-value=1.1e-10 Score=109.81 Aligned_cols=172 Identities=9% Similarity=-0.011 Sum_probs=120.0
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 323 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (444)
+|.+|......++..........++|.|+++++|.++.+.|...+...+...+.+ ...|+++||+|||+.+..+.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQ-PLFGLISDKLGLKKHLLWIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4677888888888888888889999999999899999999999999999999998 455899999999999877655554
Q ss_pred HHHHHh---hhccC----Cc-hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 324 INMFIC---SISWS----AW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 324 ~~~~~~---~~~~~----~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
++.... ...+. .+ .... .++.+++.+...+....+..+..+ +++...|......++|..++|.+.|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 157 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILF 157 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhh
Confidence 433221 11111 11 1111 234456666667777777766433 3456778888888999999999998876
Q ss_pred HhhhhcCCCcccchhHHHHHHHHHHHHHHHHHh
Q 013378 395 ALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 427 (444)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (444)
+. +.+. .|.+.+++.++..+..+.
T Consensus 158 ~~--~~~~-------~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 158 SI--DPQI-------VFWLGSGFALILMLLLMF 181 (396)
T ss_pred cc--CchH-------HHHHHHHHHHHHHHHHHH
Confidence 53 3322 344544444444444443
No 190
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.25 E-value=1e-10 Score=113.09 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHh---ccCch-----hhHHHHHHHHhhhhccc
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY---RRSIS-----FFYAYYALRTLTAMVCE 122 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~-----~~~~l~~~r~l~G~~~~ 122 (444)
.+.++......++..++.++.|+++||+|||+.+..+.++.+++.++..+ ....+ ....+....+..+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 397 (481)
T TIGR00879 319 DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA- 397 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH-
Confidence 45677888888999999999999999999999999988888777766652 11110 1222333333333312
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 195 (444)
....+....+ .|..|+++|++++++.+...++|..++|.+.+.+ +|++.|++.++++++..+...+..||+++
T Consensus 398 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 398 MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCC
Confidence 2333566678 9999999999999999999999999999887763 78899988888877777666666777543
No 191
>PRK10133 L-fucose transporter; Provisional
Probab=99.24 E-value=5e-10 Score=106.38 Aligned_cols=145 Identities=10% Similarity=-0.001 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 327 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
....+..+...+.........|.+ ++.+|.|+.+.++..+...++..+++ +..|++.||+|+|+++..+..+..++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~-~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIP-IPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344555555666666666777776 77789999999999999999999998 5568999999999999999999998887
Q ss_pred Hh---hhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 328 IC---SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 328 ~~---~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
++ ...++.+.++. .++.|++.+...+..+.++.+..|+++++...+..+....+|..++|.+++.+.
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 23455555554 577799999999999999988776666666899999999999999998887665
No 192
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.23 E-value=2.9e-07 Score=86.54 Aligned_cols=356 Identities=12% Similarity=0.104 Sum_probs=199.5
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHH-hhhccccccccCchHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVM-MPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
+....+..|+..+++++.-|.=..+.. +..+.+.....++.+...++..+. .++.+++++|++|++++-...
T Consensus 9 ~~~~~l~fF~il~~Y~iLR~lKD~lvv-------~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 9 FLPLFLMFFCILFNYTILRDTKDTLVV-------TAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhheee-------cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 444455556666666666555332221 111222245677788777777766 899999999999999999888
Q ss_pred HHhHHHHHHHHhc--cCchh--------------------------hHHHHHHHHhhhhcccchhhh-hhhhh-hccCCh
Q 013378 89 TLSIIPLAILAYR--RSISF--------------------------FYAYYALRTLTAMVCEGSINC-LALAY-ADNISE 138 (444)
Q Consensus 89 ~~~~~~~~~~~~~--~~~~~--------------------------~~~l~~~r~l~G~~~~g~~~~-~~~~~-~~~~~~ 138 (444)
..+.....++++. ++.+. .|..-+..+...+.+ ....+ .-... .|.++.
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~-~~vvS~lFW~fandi~t~ 160 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG-SVVLSLLFWGFANQITTI 160 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCH
Confidence 7777776666654 11000 122223333334422 22322 45567 999999
Q ss_pred hhhhHHHHHHHHHHHhhhhhHHHhHHhhh------------hH----HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 013378 139 RQRASAFGILLGVLSASFVCGTLAARFLS------------TT----SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 202 (444)
Q Consensus 139 ~~r~~~~~~~~~~~~lg~~~g~~l~~~l~------------~~----~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 202 (444)
+|-.|.++++..+.++|.++|+.+..++. |. ..+.+.++.. +..+.+...+.+....+++.
T Consensus 161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~-~~~~~~~~~l~~~~~~~~~~-- 237 (472)
T TIGR00769 161 DEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSG-LAIILLYWWVNRNVLTDPRS-- 237 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCCccc--
Confidence 99999999999999999999998877653 21 2333333333 23333333343222111100
Q ss_pred CCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchh
Q 013378 203 TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ 282 (444)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 282 (444)
.+ ++ .++++++++.+..+.++.+.++|.++.+.+...+++..........-...++.+. ++.+
T Consensus 238 ~~----------~~------~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~ 300 (472)
T TIGR00769 238 YN----------PA------LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNE 300 (472)
T ss_pred cc----------hh------hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHH
Confidence 00 00 0111222344778899999999999998888888877777766655566666542 4433
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHH---HHHHhhhccCC----------chHHHHHHHH
Q 013378 283 ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI---NMFICSISWSA----------WVPYATTAFS 345 (444)
Q Consensus 283 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~g 345 (444)
.|......++..++.+.+. +++.+|+|-+....+.-++..+ +++.+....+. ..+......|
T Consensus 301 ~~~f~g~~~~~~gi~tl~~~l~~-~~l~~~~Gw~~~a~i~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g 379 (472)
T TIGR00769 301 YSAFMGDFSTWTGVVSVTMMLLS-GNVIRKYGWLTAALITPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVG 379 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHHHH
Confidence 2444455666666666445 8999999987665544333333 33322221111 1111111122
Q ss_pred h--------hhhhhhHHHHHHHhhccCCCcchhHHHHHHH-HHHHHHHHhHHHHHHHH
Q 013378 346 V--------LVVFATPSFRSIVSKQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLT 394 (444)
Q Consensus 346 ~--------~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~ 394 (444)
. ..-..+-...-.+---.++|.|.++=+.... ...+|-..|+.+...+.
T Consensus 380 ~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~ 437 (472)
T TIGR00769 380 AIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLL 437 (472)
T ss_pred HHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHH
Confidence 1 1111111112222333567788777777754 44577777776555433
No 193
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.21 E-value=1.6e-10 Score=102.03 Aligned_cols=146 Identities=18% Similarity=0.222 Sum_probs=126.3
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHH
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSF 355 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~ 355 (444)
+-+..++|+++....+...+.+.+. |.+.||+|+|..+.+|+.++..+.+++++..+.+...+ =.+-|++.++.....
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~-G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFF-GNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccc-hhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 5566788999999999999998665 89999999999999999999999999999999887666 477799999999999
Q ss_pred HHHHhhccCCCc-chhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 356 RSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 356 ~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
.+++.+.+|+++ |++++|+.-....+|-.+||..+|.++|.. |+..|| ++.++++++...+.+...+.
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPF-------lVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPF-------LVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcH-------HHHHHHHHHHHHHHHheeCc
Confidence 999999999876 699999999999999999999999999987 777766 77777777766665554443
No 194
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.20 E-value=2.5e-10 Score=109.93 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=103.6
Q ss_pred ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc--cCCchHHH-HHHHHhhhhhh
Q 013378 275 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFA 351 (444)
Q Consensus 275 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~g~~~~~~ 351 (444)
.++++..+.|.+.+...++..+++ +..|++.||+|+|+.+..+.++..++.++..+. .+.+..++ -++.|++.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQ-IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHH-cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 578999999999999999999998 555899999999999999888877776665433 33444444 56779999999
Q ss_pred hHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 352 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 352 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
.|....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998875
No 195
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=1e-09 Score=104.10 Aligned_cols=176 Identities=17% Similarity=0.217 Sum_probs=136.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCch--HHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AML 84 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l 84 (444)
.|.+...++..++..-+.+.+......|..+.+ +.+..+...+.-+..+..+++++++|++.||+|.| +++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~l-------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l 352 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVL-------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL 352 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 455666677777777777777777777765443 55556667777788899999999999999999999 898
Q ss_pred HHHHHHhHHHHHHHHh--------ccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhh
Q 013378 85 TLPLTLSIIPLAILAY--------RRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSAS 155 (444)
Q Consensus 85 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg 155 (444)
..+.++..+..+...+ .++ .+.+++.-++.|+ ..|..++.+.++ ++..|+++.+..+|++....-..
T Consensus 353 ~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 353 LISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 8888887555555444 445 6888899999999 557888899999 99999999999999999999999
Q ss_pred hhhHHHhHHhh-----hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 013378 156 FVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDV 194 (444)
Q Consensus 156 ~~~g~~l~~~l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 194 (444)
..+||++.+.+ +-|+.+....++.++.+++ .+.+++++
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~l-l~~v~~~~ 471 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLIL-LFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH-Hhhccchh
Confidence 99999998886 3588887777665444443 35555543
No 196
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.19 E-value=1e-09 Score=103.45 Aligned_cols=142 Identities=14% Similarity=0.130 Sum_probs=108.4
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----Cchh-HHHHHHHHHHH
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAK-LLSLGLFAACI 324 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~~~~ 324 (444)
+..++............+|.|++++ |++.+++|.+...... .+.. .+.|+++||+ |||| .+..+....++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~-~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFK-FLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHH-HHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4455566666666678899999987 9999999998655443 3555 4448999999 6665 67777777777
Q ss_pred HHHHhhhccC---CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 325 NMFICSISWS---AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 325 ~~~~~~~~~~---~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
+...+.+.+. .+.+.. .++.+.......+...+++.|..|+++|+++.++......+|..+++.+.+.+.+.
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 7776666532 333333 34556667778899999999999999999999999999999999999998888774
No 197
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.19 E-value=1.3e-10 Score=91.99 Aligned_cols=133 Identities=19% Similarity=0.220 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc
Q 013378 289 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE 367 (444)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 367 (444)
...++..+++ ...+++.||++||+.+..+.....++.+.....++.+.... .++.+++.+...+..+++..|..|+++
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 3455666666 55589999999999999888888888777777666655554 566788888888999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 368 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 368 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
|+++.++.+....++..++|.+.+.+.+.. +++. .+.+.+...++..+......+
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRA-------PFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHH-------HHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999988654 2221 334444455555544444433
No 198
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.18 E-value=1.7e-08 Score=91.89 Aligned_cols=320 Identities=15% Similarity=0.085 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh
Q 013378 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (444)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (444)
.|.+.-+.-+..++..+.+.++.+|+..+.=.....++..++.++.+++++ .+.-+++-++.++.+ |.--..-..+
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~ss-g~GE~tfL~l 136 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASLSS-GLGEVTFLSL 136 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhhhh-hhhHHHHHHH
Confidence 355666677888888888888999987655555566678888888999999 888888888888844 4433333344
Q ss_pred hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh---h--hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcc
Q 013378 133 ADNISERQRASAFGILLGVLSASFVCGTLAARF---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPII 207 (444)
Q Consensus 133 ~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~---l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 207 (444)
+..+++ ...+-++.+.+.+.++|+..-.. + +.|..+++...+.++..+..++.+|+++..+...++++..
T Consensus 137 t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~- 211 (402)
T PF02487_consen 137 THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED- 211 (402)
T ss_pred HHhcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC-
Confidence 445553 24566666666677777644322 2 3477777777766555555555666544322211111000
Q ss_pred cccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcch-hHHHHHHHh-hccCcCchhHHH
Q 013378 208 TEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM-QASFLYFLK-AQFHFNKNQFAD 285 (444)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~g~~~~~~~~ 285 (444)
+ .+++. .+++.+..+.+...+.+.++.++.. |.+...++-.+...+..+.. +...+...- ....-...+..+
T Consensus 212 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~~---k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~ 285 (402)
T PF02487_consen 212 E-AEDDL--LESETSESKPDSSSKLSFKEKLKRL---KPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRW 285 (402)
T ss_pred c-ccccc--cccccccccccccchhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHH
Confidence 0 00000 0000000111111122333323222 22222333333333333332 223333321 221222344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHH---HhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhh
Q 013378 286 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF---ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSK 361 (444)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 361 (444)
+.....++..+++.-. .. . |+++.+++.+-..+-.+.++ .+-+.++.|.... ++..|+..|..+......+.|
T Consensus 286 Y~~~YQ~GVFISRSS~-~~-~-rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSL-PF-F-RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred HHHHHHHHHhhhhcce-ee-e-ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 5566666655554221 11 1 23333332222222111111 1223445665554 555688889999998888999
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHhHHHH
Q 013378 362 QVGPNEQGKAQGCISGISSFANIVSPLIF 390 (444)
Q Consensus 362 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 390 (444)
..|+++|.-++|.......+|..++..++
T Consensus 363 ~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 363 EVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred cCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999988888888877554
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.18 E-value=1.3e-09 Score=101.96 Aligned_cols=159 Identities=11% Similarity=0.109 Sum_probs=119.7
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+.++.+....++............|.+.++. +.+..+.|...+...++..+..++.|++.||+|+|+.+..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQAA--------GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHHHC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3344445545555555555666677776442 44456778888888999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHH-HHHHhhhhhHHHhHHh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILL-GVLSASFVCGTLAARF 165 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~ 165 (444)
....+++.+..++.++ .+.+++..++.|+ +.+...+....+ .+. +++++++..+..+ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~ 351 (382)
T PRK11128 277 AICGVVRWGLMGSTTA---LPWLIVIQILHCG-TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGF 351 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888888888 8888999999999 446666777777 665 6677788888886 5567788899999888
Q ss_pred h----hhHHHHHHHHHHHH
Q 013378 166 L----STTSAFQAATIVSM 180 (444)
Q Consensus 166 l----~~~~~f~~~~~~~~ 180 (444)
+ ++ ..++..+.+.+
T Consensus 352 l~~~~g~-~~~~~~~~~~~ 369 (382)
T PRK11128 352 LYQHLGA-GVFWVMALVAL 369 (382)
T ss_pred HHHhccH-HHHHHHHHHHH
Confidence 6 44 45555555543
No 200
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2.3e-11 Score=109.63 Aligned_cols=153 Identities=12% Similarity=0.168 Sum_probs=126.6
Q ss_pred HhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhh
Q 013378 272 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVF 350 (444)
Q Consensus 272 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~ 350 (444)
.++.+|.++...|++.....+..++.+.+. |++.||++|++++.+|..+..++.+..++..++|.+.+ -.+.|+|.+.
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~-gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLF-GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHH-HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 456689999999999999999999998555 89999999999999999999999999988888888777 5778999999
Q ss_pred hhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 351 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
..|...++++|.+|+++|++++++.+.....|..+|-..++.+.++....++.+ ...+++.++..++.....+
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af-------~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAF-------RGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEE-------EeehHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999988888877753344444 4445555555555544444
Q ss_pred CC
Q 013378 431 TP 432 (444)
Q Consensus 431 ~~ 432 (444)
++
T Consensus 211 eP 212 (493)
T KOG1330|consen 211 EP 212 (493)
T ss_pred Cc
Confidence 33
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=5e-09 Score=99.81 Aligned_cols=129 Identities=11% Similarity=0.019 Sum_probs=95.0
Q ss_pred hHHHHHHHhhccC---cCchhH---HHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCc--
Q 013378 265 QASFLYFLKAQFH---FNKNQF---ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW-- 336 (444)
Q Consensus 265 ~~~~~~~~~~~~g---~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 336 (444)
..+...++.++++ .+..+. +..++...++..+++ +..|+++||+|||+.+..+.....++.+..++.++..
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~-~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 119 (432)
T PRK10406 41 YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGG-WLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETI 119 (432)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhH
Confidence 4444445555553 444432 333444445555776 5568999999999999999999999998888877643
Q ss_pred ------hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 337 ------VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 337 ------~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.++. -++.|++.+...|...+++.|..|+++||++.++.+.....|..+++.+...+.
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 457789999999999999999999999999999888888888888776655443
No 202
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.17 E-value=3e-10 Score=106.80 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (444)
+.......+..........+.+|.+.++.. +.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTL-------GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 444444555555566666777888875542 3334567888888999999999999999999999998775554
Q ss_pred HhHHHH--HHHHhc--cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHH-HHHHHHhhhhhHHHhH
Q 013378 90 LSIIPL--AILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGI-LLGVLSASFVCGTLAA 163 (444)
Q Consensus 90 ~~~~~~--~~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~-~~~~~~lg~~~g~~l~ 163 (444)
+..+.. ....+. ++ .+.++...++.|++. +...+...++ .|.+|+++|+++.++ .+....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLALIG-GMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHHHH-HHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 443332 222222 34 666777788888834 5666778888 999999999999987 4566677888888888
Q ss_pred Hhh----h-hHHHHHHHHHH
Q 013378 164 RFL----S-TTSAFQAATIV 178 (444)
Q Consensus 164 ~~l----~-~~~~f~~~~~~ 178 (444)
+.+ + |+..++.....
T Consensus 370 g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHcCcchhHHHHHHHH
Confidence 775 4 66666555443
No 203
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.15 E-value=6.6e-10 Score=101.81 Aligned_cols=180 Identities=16% Similarity=0.177 Sum_probs=144.1
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccC----cCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH----FNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSL 317 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 317 (444)
++|.++.+...-+.--+.+++....+..|+..+++ +|.+++..++..++...-.. .+.+|+++|| +|+|+.+..
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t-~i~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLT-PIIGGWLADRVLGTRRTIVL 97 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHH-HHHHHHHHHHhcchhHHHHH
Confidence 46777888888888899999999999999888777 99988777777666655555 3777999999 599999999
Q ss_pred HHHHHHHHHHHhhhcc--CCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc--chhHHHHHHHHHHHHHHHhHHHHHH
Q 013378 318 GLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSP 392 (444)
Q Consensus 318 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~~~~~~g~ 392 (444)
|.++..++.++++... ....+++ ..++++|.|..-|...+++.|.+|+++ |-..+++.....++|+.++|.+.++
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~ 177 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGL 177 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHH
Confidence 9999999999998874 4444444 677789999999999999999998764 5667888889999999999999999
Q ss_pred HHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccC
Q 013378 393 LTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 393 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (444)
+.+.. +++. .|..+++-...+++..+..+++
T Consensus 178 ~~~~~-g~~~-------gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 178 LAINY-GWHV-------GFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHhh-CHHH-------HHHHHHHHHHHHHHHHHHccch
Confidence 99886 4333 4466666666666666655543
No 204
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.15 E-value=1.1e-07 Score=88.16 Aligned_cols=305 Identities=13% Similarity=0.060 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hcc
Q 013378 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADN 135 (444)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~ 135 (444)
.++-.....++.++.+.+.|+.|.|..+.++........+..-+.+. +.++++..+.|+ +.+..+...-.+ ++.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~-Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGF-GAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhh-hHHheecccceehhhc
Confidence 66777778888899999999999999999999999888877766554 778899999999 447777777778 999
Q ss_pred CChhhhhHHHHHHHHHHHhhhhhHHHhHHhh------------hhH-HH----------HHHHHHHHHHHHHHHHHhccC
Q 013378 136 ISERQRASAFGILLGVLSASFVCGTLAARFL------------STT-SA----------FQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 136 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l------------~~~-~~----------f~~~~~~~~~~~~~~~~~~~e 192 (444)
.+++++.+..++.-.....+.++|..+-..+ +.+ .. ..+.+++..+..+...-...+
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999988888888886554332 111 11 111111111111111111111
Q ss_pred CCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHH
Q 013378 193 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 272 (444)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (444)
+.+..... . ++.+....+.++...+ +.+++++..+....+..++.........|..+
T Consensus 211 p~~~~~~~----------------~------~~~~~~~~~~l~~~~~-l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i 267 (461)
T KOG3098|consen 211 PSKDVVNC----------------K------SSSETSFSELLKLTFK-LLKTPKMLLLFPFFFYTGLETSFWISIYPTCI 267 (461)
T ss_pred Cccchhhh----------------h------hhccccHHHHHHHHHH-HhcCHhHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 11110000 0 0000011112333333 34566666655555555554444455555443
Q ss_pred hh--ccCcCch-hHHHHHHHHHHHHHHHHHHHHHHHhh---hhCchhHHHHHHHHHHHHHHHhhhccC------------
Q 013378 273 KA--QFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP---ILGEAKLLSLGLFAACINMFICSISWS------------ 334 (444)
Q Consensus 273 ~~--~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 334 (444)
.- ..+.+.. ..+......+++..++. ...+.+.| ++|++.++.++..+..+..++.-....
T Consensus 268 ~ft~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~ 346 (461)
T KOG3098|consen 268 SFTRKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPP 346 (461)
T ss_pred hhhhhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccc
Confidence 21 2233332 33444555666666655 33356665 467788888777777666655443210
Q ss_pred ------C-chHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 335 ------A-WVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 335 ------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
. ...++.++.|++-.......+.++...+ +++|.++.++.-.-+.++..++-+...
T Consensus 347 ~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 347 LLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred cccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 1 1122256678888888899999999888 478888888888777777766554443
No 205
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.14 E-value=2.6e-08 Score=96.19 Aligned_cols=165 Identities=13% Similarity=0.088 Sum_probs=110.3
Q ss_pred HHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHH-HHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHH
Q 013378 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQA-IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (444)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 95 (444)
.++...+........+.+..+. .+.+..+.|+... ...++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~-------~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRG-------VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3444444444444455554332 2455577788874 5568999999999999999999998877666555544
Q ss_pred HHH---Hhc-cCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh----h
Q 013378 96 AIL---AYR-RSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF----L 166 (444)
Q Consensus 96 ~~~---~~~-~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~----l 166 (444)
+.. +.. ++ .+.+...-+++.+ ..+...+...++ .+..+++.+++..++.+...++|..+++.+.|. .
T Consensus 304 l~~~~l~~~~~~---~~~l~~~~~l~~~-~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 304 AGYWLLSITDKN---LYSMGAAVFFENL-CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHHHhcccc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 333 23 4444555555554 224444556777 889999999999999999999998877666665 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 013378 167 STTSAFQAATIVSMLAAAYMRVFLKDD 193 (444)
Q Consensus 167 ~~~~~f~~~~~~~~~~~~~~~~~~~e~ 193 (444)
||+..|.+.++++++..+... .++++
T Consensus 380 G~~~~f~~~~~~~l~~l~~~~-~~~~~ 405 (491)
T PRK11010 380 GWPTFYLFSVAAAVPGLLLLL-VCRQT 405 (491)
T ss_pred ChHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 899999888888766554443 34554
No 206
>PRK09952 shikimate transporter; Provisional
Probab=99.13 E-value=5.7e-09 Score=99.50 Aligned_cols=128 Identities=10% Similarity=0.041 Sum_probs=95.2
Q ss_pred HHHHHHhhcc--CcCchhHHHHHH-----HHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCch--
Q 013378 267 SFLYFLKAQF--HFNKNQFADLML-----IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV-- 337 (444)
Q Consensus 267 ~~~~~~~~~~--g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 337 (444)
..|.+..+.+ +.++.+ +...+ ...++..+++ +..|++.||+|||+.+..+..+..++.++.++.++.+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 121 (438)
T PRK09952 44 TAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGG-VVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIG 121 (438)
T ss_pred HHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 3444444443 556553 44322 2233345665 55589999999999999999999999999988887542
Q ss_pred ------HHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 338 ------PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 338 ------~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++. -++.|++.+...+....++.|..|+++|+...+..+....+|..+++.+.+.+...
T Consensus 122 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~ 187 (438)
T PRK09952 122 WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMM 187 (438)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 46678999999999999999999999999999988888888888887777666543
No 207
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.13 E-value=1.7e-09 Score=104.75 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=95.9
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc---------cCC---chHHH-HHH
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WSA---WVPYA-TTA 343 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~-~~~ 343 (444)
+.+..+.++..+...++..+++ +..|+++||+|||+.+..+..+..++.+...+. ++. +.++. -++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~-~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGG-ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 7888899999999999999998 555899999999999999988887777665542 111 12222 466
Q ss_pred HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 344 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.|++.+...+...+++.|.+|+++||++.++.+....+|..+++.+.+.+.
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999999998887665554
No 208
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.13 E-value=2.1e-09 Score=96.28 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=107.2
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCc---hHH
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW---VPY 339 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 339 (444)
....-+...+++.+|+|+.|.+++.++..+.+.+.+... +.+.||+|.|+....+.++..+-.+...+..+.+ .++
T Consensus 31 ~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~-g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll 109 (417)
T COG2223 31 TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPY-GFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLL 109 (417)
T ss_pred HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHH-HhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHH
Confidence 334444455668889999999999999999999999555 8999999999999999999888888887776544 444
Q ss_pred H-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 340 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 340 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
. ..+.|++ +..+......+++.+|||++|.++|+.. .+|+|..+...+...+....
T Consensus 110 ~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 110 VIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 4 3334443 4467778889999999999999999988 99999999998888888776
No 209
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.12 E-value=9.7e-10 Score=108.62 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=113.2
Q ss_pred HHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc---
Q 013378 257 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--- 333 (444)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (444)
......++....-.-++++++++..+.|++.+...++..+.. +..+++.||.+|++.+.++.++.+++.+++++.+
T Consensus 44 ~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~ 122 (633)
T TIGR00805 44 QGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLS 122 (633)
T ss_pred HHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhc
Confidence 333333443333345677899999999999999999999997 5558999999999999999999999888776542
Q ss_pred ----------------------------------------------C-Cc-hHHH-HHHHHhhhhhhhHHHHHHHhhccC
Q 013378 334 ----------------------------------------------S-AW-VPYA-TTAFSVLVVFATPSFRSIVSKQVG 364 (444)
Q Consensus 334 ----------------------------------------------~-~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 364 (444)
+ .+ .+++ -++.|++.+..++...+++.|.+|
T Consensus 123 ~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~ 202 (633)
T TIGR00805 123 GRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK 202 (633)
T ss_pred CCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC
Confidence 0 11 1222 567789999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 365 PNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 365 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+++|+.+.|+.+....+|..+|+.+++.+.+.+
T Consensus 203 ~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 203 SKNSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred ccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 999999999999999999999999999998764
No 210
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=7.8e-10 Score=97.22 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=99.0
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHH
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSF 355 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~ 355 (444)
+.+..-.|++-+.+++...+.+... |.++||+|||.++..+.+..++..++.+...++..+.. =++.|+..+ .....
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~-G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLW-GCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhh-hhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHH
Confidence 3455567888899999999998555 89999999999999999999999999888888743433 345566555 45667
Q ss_pred HHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 356 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 356 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
.++++|.+++++|+.+++.++....+|.++||.++|++.+
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 8999999999999999999999999999999999999988
No 211
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=3.6e-09 Score=113.56 Aligned_cols=155 Identities=14% Similarity=0.133 Sum_probs=115.0
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
.++++.++.++...++..+........+..++...++.+. ...++..++..+...+++ +..|+++||+|||+++..+
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~G~l~Dr~grk~~l~~~ 83 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLS-SPAGFLADKFSKNRVIRIV 83 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHh-hhHhhhcccccHHHHHHHH
Confidence 3456677777777666666555554445445544445543 335777777778888887 5558999999999999888
Q ss_pred HHHHHHHHHHhhh---ccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 319 LFAACINMFICSI---SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 319 ~~~~~~~~~~~~~---~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
..+..+..++..+ ..+.+.+++ .++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+|+.+++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 84 KLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7665544443332 344444444 566788889999999999999999999999999999999999999999999998
Q ss_pred Hh
Q 013378 395 AL 396 (444)
Q Consensus 395 ~~ 396 (444)
+.
T Consensus 164 ~~ 165 (1146)
T PRK08633 164 ES 165 (1146)
T ss_pred Hh
Confidence 76
No 212
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.10 E-value=3e-09 Score=98.66 Aligned_cols=131 Identities=15% Similarity=0.121 Sum_probs=104.6
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-H
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-T 341 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (444)
.....+|.+.+ .+|++..+.++..+...++..++. +..|++.||+|+|+.+..+..+..++.+.. ..++.+.++. .
T Consensus 18 ~~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 18 SVGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLA-PLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred cCcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 34456666654 569999999999999999999997 555899999999999999888777776665 4455555444 4
Q ss_pred HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 342 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
++.|++.+...+.....+.|..| ++|+++.|..+....+|..+++.+.+.+.+..
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56677777777777778888776 68999999999999999999999999887764
No 213
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.10 E-value=7.1e-09 Score=100.74 Aligned_cols=118 Identities=16% Similarity=0.100 Sum_probs=97.6
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC------CchHHH-HHHHHhhhh
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS------AWVPYA-TTAFSVLVV 349 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~g~~~~ 349 (444)
+.+..+.+.+.+...++..++. +..+++.||+|||+.+..+.++..++.++.....+ .+.++. -++.|++.+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~-~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQ-LFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 3455566888888889899997 55589999999999999998888888777766544 223333 567799999
Q ss_pred hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 350 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
...+....++.|.+|+++||++.++.+....+|..+++.+...+..
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988877654
No 214
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=3.9e-09 Score=99.20 Aligned_cols=163 Identities=11% Similarity=0.018 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHH-HHHHHhhhccccccccCchHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
.++......++...+........+.+.+|. +.+..+.|++...... ...++.++.|++.||+|+|+.+..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--------G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVDA--------GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG 280 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHhc--------CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 344445555566666666666777777543 5555778888887764 6667788999999999999999887
Q ss_pred HHHhHHHHHHHHh------ccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCCh-hhhhHHHHHHHHHHHhhhhhH
Q 013378 88 LTLSIIPLAILAY------RRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISE-RQRASAFGILLGVLSASFVCG 159 (444)
Q Consensus 88 ~~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~-~~r~~~~~~~~~~~~lg~~~g 159 (444)
..+.++....... .++ .+.++....+.++ ..+...+...+. .+..++ +++++.++..+...++|..+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 281 VGLAGSLALLWFAQAAFWLAPG---IAVAWSCSAFGSL-ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHHHHcccCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 7665333322221 122 3444455555555 335555666677 666665 889999999999999999999
Q ss_pred HHhHHhh----hhHHHHHHHHHHHHHHH
Q 013378 160 TLAARFL----STTSAFQAATIVSMLAA 183 (444)
Q Consensus 160 ~~l~~~l----~~~~~f~~~~~~~~~~~ 183 (444)
|.+++.+ |++..|++.+.+.++..
T Consensus 357 ~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 357 SSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 9998874 67888888776654443
No 215
>PTZ00207 hypothetical protein; Provisional
Probab=99.09 E-value=9.4e-09 Score=99.16 Aligned_cols=124 Identities=9% Similarity=0.130 Sum_probs=94.0
Q ss_pred HHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc------cCCchHHH-
Q 013378 268 FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS------WSAWVPYA- 340 (444)
Q Consensus 268 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~- 340 (444)
....+++.+|+|..+.+.+.+.. ......+ +..|++.||+|+|+++.++.++..++.++.++. .+.+.+++
T Consensus 49 ~s~~L~~~lgls~~~l~~i~svg-~~~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTVG-IAVGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHH-HHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 33456777899999998887653 3333444 345899999999999999999999999888876 34444444
Q ss_pred HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 341 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 341 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.++.|++.+...+.....+.+.+| ++||++.|+......+|+++.+.+...++
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777888888887 78999999999999999986555544444
No 216
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.09 E-value=7.1e-09 Score=96.15 Aligned_cols=163 Identities=11% Similarity=0.120 Sum_probs=108.9
Q ss_pred hhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CchhH-HHHHHHHHHHHHHHhhhccC---
Q 013378 264 MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKL-LSLGLFAACINMFICSISWS--- 334 (444)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~--- 334 (444)
.....|.+.+|. |+|.++.|..... .+...+ . ++.|.+.||+ |||+. +..+.+..++....+.+..+
T Consensus 7 ~~~~~~~~~~~~-g~s~~~~g~~~~~-~~~~~~-~-~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 7 VGNTLPYWLRSK-NVSLKTIGFFSLV-GLPYSL-K-FLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred HHhHHHHHHHHc-CCCHHHHHHHHHH-HHHHHH-H-HHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 345677777765 9999999998644 444444 4 4458999997 78776 45666666666555555532
Q ss_pred CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCC-CcccchhHHH
Q 013378 335 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA-PFNFPGFSIM 412 (444)
Q Consensus 335 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~-~~~~~~~~~~ 412 (444)
.+.... .++.+.+.+...+...+++.|.+|+++|+++.|+......+|..+++.+.+.+.+..+.... ...| ...+.
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w-r~~f~ 161 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW-GYIFF 161 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc-HHHHH
Confidence 222222 33456666677889999999999999999999999999999999999999998877621110 0001 12445
Q ss_pred HHHHHHHHHHHHHHhcccC
Q 013378 413 CIGLASMVAFIQSLMMSHT 431 (444)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~ 431 (444)
+.++..++..+..+...+|
T Consensus 162 i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 5555555555444443333
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.08 E-value=1.3e-08 Score=93.28 Aligned_cols=182 Identities=12% Similarity=0.054 Sum_probs=141.3
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.++.+.+........+.......|.|..... ++.+.++...|.+.+..-+.-++.-.+..++.+|+|.|+.++++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f----~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla 295 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF----QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH
Confidence 34444444433333445555556777777764 44466667889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHH-HHHHHhhhhhHHHhHHh
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGIL-LGVLSASFVCGTLAARF 165 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~-~~~~~lg~~~g~~l~~~ 165 (444)
..+..+=..+++++++ .+.+.+.+.+.|+ .-+........+ ++.+|+|-.++...+. +...++|..+.+.++|.
T Consensus 296 g~i~~iRi~~~~~~~~---~~~i~~~klLH~~-e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 296 GVIMAIRIIGSGFATN---PWVISLIKLLHAL-EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHT--S---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 9999999999999999 9999999999999 557777788889 9999988888888774 67888888888888877
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013378 166 L----STTSAFQAATIVSMLAAAYMRVFLKDDVPND 197 (444)
Q Consensus 166 l----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 197 (444)
+ |.+..|++.+.+.+...++..+.++++++..
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 4 7788999999887777788888887766543
No 218
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.3e-09 Score=97.76 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=134.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
++++...++..++..=+.+.+...-..|. ..+++++..+..++.....+..+++++++|++.||+|.|+++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg-------~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFG-------AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHH-------HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 44565666666665555555555555554 34567888888898999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.++..+.++...+... -..+.+.-.+.|. ..|..+..+.++ .+..|++|-++.+|+++.....+..+||.+-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~-s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 324 GLVILSIAALYLIFLEG---ELDFWILGLLVGT-SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99999888887777776 5666777788888 557777899999 999999999999999999999999999998887
Q ss_pred h-----hhHHHHHHHHHHHHHHHHHHHHhccCC
Q 013378 166 L-----STTSAFQAATIVSMLAAAYMRVFLKDD 193 (444)
Q Consensus 166 l-----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 193 (444)
+ +-|..+....++. ...+.....+|++
T Consensus 400 ~t~iTg~~r~g~~~i~vll-~iGl~~L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLL-LIGLLLLLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHH-HhhHhhEEeecCC
Confidence 5 3466666555553 3333344455554
No 219
>TIGR00898 2A0119 cation transport protein.
Probab=99.08 E-value=4.4e-09 Score=102.51 Aligned_cols=135 Identities=18% Similarity=0.142 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccC
Q 013378 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNI 136 (444)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~ 136 (444)
....+...++.++.+++.||+|||+.+..+.++.+++.++..+.++.. .+...+.-++.+++. +...+....+ .|.+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKFGI-TSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHHHH-HHHHHHHHHHhcccc
Confidence 344566777888899999999999999999999998888888776521 244444455555533 4455677888 9999
Q ss_pred ChhhhhHHHHHHHHHHHhhhhhHHHhHHhh--hhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 013378 137 SERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 137 ~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 195 (444)
|++.|++++|+.+....+|.+++|.+.+.. ++..++.+.+...++..+. .+++||+..
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 499 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGIL-TLFLPETKG 499 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHcCcCCCC
Confidence 999999999999999999999999988732 4466777777665555444 456788654
No 220
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.07 E-value=1e-08 Score=96.71 Aligned_cols=184 Identities=11% Similarity=0.022 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCchhHHHH-HHH
Q 013378 246 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGEAKLLSL-GLF 320 (444)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~-~~~ 320 (444)
++..+....+..++.+.....+.+.|+++ +|.++...+.+.....+...+.+.+. |+++| |+|||+..+. +..
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~-G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLV-GYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHe-eehhcCCCCCCCChHHHHHHHHH
Confidence 44455666666677777778888888855 69999999999999999999998554 89999 5999998766 466
Q ss_pred HHHHHHHHhhhccCCc-----------------hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcc--hhHHHHHHHHHH
Q 013378 321 AACINMFICSISWSAW-----------------VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQ--GKAQGCISGISS 380 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~-----------------~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~ 380 (444)
...+++.++.+..+.+ .... ..+..+......+...+++.|..|+++| +.+.++.+...+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 6666767776654321 1111 2233456777778889999999998865 679999999999
Q ss_pred HHHHHhHHHHHHH--HHhhhhcC--CCcc----cchhHHHHHHHHHHHHHHHHHhcccCC
Q 013378 381 FANIVSPLIFSPL--TALFLSKG--APFN----FPGFSIMCIGLASMVAFIQSLMMSHTP 432 (444)
Q Consensus 381 ~g~~~~~~~~g~l--~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (444)
+|+.+|+.+++.. .+.+ +.. .... ..-..|.+.+++.+++........+|.
T Consensus 163 lG~ilg~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIF-PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHhHHHhc-ccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 9999999988865 2221 110 0000 112256677776777666666554443
No 221
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=6.6e-09 Score=111.24 Aligned_cols=156 Identities=15% Similarity=0.049 Sum_probs=105.3
Q ss_pred hccchhHHHHHHHHHHHHhhhcchhHHHH---H-HHhhccCcCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHH
Q 013378 241 LRSSVTLSQAAVVAFFSGLSEGGMQASFL---Y-FLKAQFHFNK-NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 315 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 315 (444)
++++++++.++...++..+........++ . .+.+..+.+. ...++..++..+...+.+ .+.|+++||++||+++
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFS-ALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHh-hhHHhhhhhccHHHHH
Confidence 34556666666666665555433222212 1 2222222222 345666777777777886 5558999999999975
Q ss_pred HHHHH--HHHHHHHHhh-hccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 316 SLGLF--AACINMFICS-ISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 316 ~~~~~--~~~~~~~~~~-~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
..... +.......+. ..++.+.+++ .++.|++.+...|...+++.+.+|++++++++|+.++...+|..+||.++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g 165 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGG 165 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 33211 1111222222 2356666555 677799999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 013378 392 PLTALF 397 (444)
Q Consensus 392 ~l~~~~ 397 (444)
++.+..
T Consensus 166 ~l~~~~ 171 (1140)
T PRK06814 166 LATISG 171 (1140)
T ss_pred HHHhcc
Confidence 998864
No 222
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.07 E-value=1.2e-08 Score=94.85 Aligned_cols=176 Identities=15% Similarity=0.187 Sum_probs=134.0
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.+...++..++...+.+.+....+.|.++. +. .+....|.+.++..++-++.-...+++..|+|.|+++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~---gg----~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQEL---GG----YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3455566677778888888888889888775 21 2224557777888888889999999999999999999999
Q ss_pred HHHhHHHHHHHHhc-cCchhhHHH----HHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHH-HHhhhhhHH
Q 013378 88 LTLSIIPLAILAYR-RSISFFYAY----YALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGV-LSASFVCGT 160 (444)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~l----~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~-~~lg~~~g~ 160 (444)
.+..++=..+++.. ++ .+.. .....+.|+ +-+....+...+ .+..|++.|+++.++++.. .++|..+|.
T Consensus 280 ~~~~~vR~~l~a~~~~~---~~~~~~~~~l~q~lhG~-tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~ 355 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDP---WPFIVALQLLGQLLHGL-TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGS 355 (400)
T ss_pred HHHHHHHHHHHHHhcCC---cHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999887 44 3332 334567999 557788888899 9999999999999998764 689999999
Q ss_pred HhHHhh----------hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 013378 161 LAARFL----------STTSAFQAATIVSMLAAAYMRVFLKDDV 194 (444)
Q Consensus 161 ~l~~~l----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 194 (444)
.++|++ .|...+.+.+.+.++..++.++..||++
T Consensus 356 ~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 356 LIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 999885 2344556666665556566666666543
No 223
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=1.3e-08 Score=97.03 Aligned_cols=145 Identities=13% Similarity=0.035 Sum_probs=104.3
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHH-HHH-----HHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 249 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM-LIA-----GLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
...+..++...-...+....|. +.+.++.++.+.+... +.. .+...+++ +..|++.||+|||+.+..+..+.
T Consensus 19 ~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~-~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 19 RVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGA-IVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHH-HHHHHHhhhhchHHHHHHHHHHH
Confidence 3444444444444444555554 4455688776654332 211 11123455 55589999999999999999999
Q ss_pred HHHHHHhhhccCCch--------HHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 323 CINMFICSISWSAWV--------PYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~--------~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
.++.++..+.++.+. +++ -++.|++.+...+....++.|.+|+++|+++.++.+...+++..+++.+++.+
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l 176 (434)
T PRK15075 97 ASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL 176 (434)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888887553 222 45678888888888889999999999999999999999999988888887776
Q ss_pred HH
Q 013378 394 TA 395 (444)
Q Consensus 394 ~~ 395 (444)
..
T Consensus 177 ~~ 178 (434)
T PRK15075 177 NQ 178 (434)
T ss_pred HH
Confidence 54
No 224
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.00 E-value=5.7e-09 Score=99.74 Aligned_cols=148 Identities=15% Similarity=0.148 Sum_probs=106.8
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
|.++.+....++...+........+.+.++.. + +..+.+++.++..++.+++.+++++++||+|||+++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVL-------G-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeec-------C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 44455555555555555544444444442221 1 123456777888999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCC-------hhhhhHHHHHHHHHHHhhhhhH
Q 013378 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNIS-------ERQRASAFGILLGVLSASFVCG 159 (444)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~-------~~~r~~~~~~~~~~~~lg~~~g 159 (444)
..+.+++.+...+.++. .+.+++..++.|++. +...+...++ +|..+ ++++|...++.+....+|..+|
T Consensus 294 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGSN--LPLILVLIILAGFGQ-NFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcchh--HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 98888887777765421 566677778888844 6666777788 88765 4557999999999999999999
Q ss_pred HHhHHhh
Q 013378 160 TLAARFL 166 (444)
Q Consensus 160 ~~l~~~l 166 (444)
+.+.+.+
T Consensus 371 ~~i~g~l 377 (437)
T TIGR00792 371 GFLVGLI 377 (437)
T ss_pred HHHHHHH
Confidence 9887764
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.00 E-value=3.3e-08 Score=88.22 Aligned_cols=133 Identities=15% Similarity=0.047 Sum_probs=112.2
Q ss_pred chhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC---CchHH
Q 013378 263 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS---AWVPY 339 (444)
Q Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 339 (444)
..+..+.+.+++.++.+..+++.+......+..+.+ +..+++.+|+|+|+-+..|+.++++++.++.-..+ ....+
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~-lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL 108 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMS-LPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFL 108 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 345555566788899999999999998888888886 66689999999999999999999999988864332 33333
Q ss_pred H-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 340 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 340 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
. .++.+.|.+......+.++...-|++....-+.+.+.++.+|.+++|.+++.+..+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 3 57778899999999999999999998888899999999999999999999999884
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.3e-08 Score=96.13 Aligned_cols=123 Identities=12% Similarity=0.116 Sum_probs=109.4
Q ss_pred hhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC--CchHHH-HHHHHhhhh
Q 013378 273 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS--AWVPYA-TTAFSVLVV 349 (444)
Q Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~g~~~~ 349 (444)
++.+++++.+-+++++....+.++++ +.++++.||+|.|+++..+.++.+++.++.++..+ .+.+++ =++.|++.+
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~-iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQ-IPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHH-cCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 34688999999999999999999998 66689999999999999999999998888877653 443333 577899999
Q ss_pred hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 350 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
..+|....+..+-.|+++|++..++.....++|.+++-++.|.+.+.
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s 190 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES 190 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 99999999999999999999999999999999999999999999987
No 227
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.93 E-value=6.1e-08 Score=84.28 Aligned_cols=353 Identities=15% Similarity=0.084 Sum_probs=205.7
Q ss_pred HHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhh
Q 013378 64 TLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRA 142 (444)
Q Consensus 64 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~ 142 (444)
+.+.-.+.=.+.|-.-.|++++.-.+.......+.-+.++ .+.+-+.-+..|. ..+.. .+..++ -..++++++.
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~-~tAaE-IAYysYIYs~Vd~~~Yq 129 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGP-ATAAE-IAYYSYIYSKVDPEMYK 129 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcCh-HHHHH-HhhhheeeeecCHHHHH
Confidence 3344444445889998999999888888888888999999 8988899999999 42443 467778 7888999999
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhh------hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCccccccccccc
Q 013378 143 SAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQ 216 (444)
Q Consensus 143 ~~~~~~~~~~~lg~~~g~~l~~~l------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 216 (444)
++.+....+.-.|...|..++..+ ++...-.+..... ........++|..++..-.+.++++.. ..+
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~-~ia~~~A~fLP~v~rSl~f~~~~~~~~------v~~ 202 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEV-TIAVLLALFLPRVKRSLYFHRLEDKIS------VGD 202 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHH-HHHHHHHhhCCCCchhhhhhcccccce------ecc
Confidence 999999988888888887777664 2222223322221 222333455776653321111111111 000
Q ss_pred CCCCCCCcCCcc---ccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccC-cCchhHHHHHHHHHH
Q 013378 217 NESNSPVKIPVC---KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH-FNKNQFADLMLIAGL 292 (444)
Q Consensus 217 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~ 292 (444)
.++..+..+... .....+.+-+....+||+++...+=..+...+++....+....-++.-. -...-.|..=++..+
T Consensus 203 ~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tl 282 (433)
T KOG3810|consen 203 LEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTL 282 (433)
T ss_pred chhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHH
Confidence 011111000000 0001112223334567776665555555555555555554444444311 111112444455556
Q ss_pred HHHHHHHHHHHHHhhhhCch--hHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcch
Q 013378 293 AGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQG 369 (444)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 369 (444)
.++++. +..|.+.-++.|. .++.++.+..+...+.+..+.+.|..++ .+++........+.....+.+....+.-|
T Consensus 283 LGa~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~g 361 (433)
T KOG3810|consen 283 LGAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFG 361 (433)
T ss_pred HHHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhe
Confidence 666665 4446765444443 3445555566666677777778888887 45566777777777777777788888889
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHhh---hhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCC
Q 013378 370 KAQGCISGISSFANIVSPLIFSPLTALF---LSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 432 (444)
Q Consensus 370 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (444)
..+|+...+.-+-+.+-..+ +.|.- ...+..+...+..|++.+.+.+++....+...++.
T Consensus 362 LvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~ 424 (433)
T KOG3810|consen 362 LVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRN 424 (433)
T ss_pred eeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcC
Confidence 99998887766555444332 23321 12233344455677888888887766555444443
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=98.91 E-value=9.3e-09 Score=98.48 Aligned_cols=150 Identities=11% Similarity=0.088 Sum_probs=107.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|.+....+..++...+........|.+.++. .+.+....++......++.+++.++++++.||+|+|+++..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYV-------LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeee-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34555555555666666555555556555433 23333444454555567788899999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhh-------hhHHHHHHHHHHHhhhhh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQ-------RASAFGILLGVLSASFVC 158 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~-------r~~~~~~~~~~~~lg~~~ 158 (444)
+..+..++.++..+.++.+ .+.+++..++.|+| .+...+...++ +|..|++| +|...+..+....+|..+
T Consensus 300 g~~~~~i~~~~~~~~~~~~-~~~~~~~~~l~g~G-~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 300 GALLGTCGYLLFFWVSVWS-LPVALVALAIASIG-QGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHcCchh-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 9998888887777755321 56677778888884 46666778888 88887653 588899999999999999
Q ss_pred HHHhHHh
Q 013378 159 GTLAARF 165 (444)
Q Consensus 159 g~~l~~~ 165 (444)
|+.+.+.
T Consensus 378 g~~i~g~ 384 (448)
T PRK09848 378 GGSIPAF 384 (448)
T ss_pred HHHHHHH
Confidence 9887765
No 229
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=6.2e-08 Score=90.63 Aligned_cols=151 Identities=16% Similarity=0.134 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc-----hhhH-HHHHHHHhhhhc
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFY-AYYALRTLTAMV 120 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-----~~~~-~l~~~r~l~G~~ 120 (444)
+.+..+.-+..........+.++....+.||+|||+.++.+..+..+..+++...... ++.+ ..+++.++..++
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIIS 380 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 4555666777777888888999999999999999999999999998888777654211 1111 234444444443
Q ss_pred ccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhH----HHhHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 013378 121 CEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCG----TLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 121 ~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g----~~l~~~l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 195 (444)
-+-...|...-+ +|.+|++.|+.+.+.......+...+- |.+-..+|- +.|++..+++++..+..++.+||++.
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 323334667778 999999999999998888776665553 344444555 77777777888888999999999975
Q ss_pred CCC
Q 013378 196 NDD 198 (444)
Q Consensus 196 ~~~ 198 (444)
+..
T Consensus 460 r~~ 462 (485)
T KOG0569|consen 460 RTP 462 (485)
T ss_pred CCH
Confidence 543
No 230
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=3e-08 Score=83.05 Aligned_cols=292 Identities=11% Similarity=0.027 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhh
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLAL 130 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~ 130 (444)
.++|.+.-+..-..++.+.+.|.++||-|||+.-+ .+.+..+++......+++-.++++|++-|+ +.+..+++-.
T Consensus 72 G~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv----tycitYiLsCiTKhSpqYkVLmVGR~LGGi-aTsLLFSaFE 146 (454)
T KOG4332|consen 72 GDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV----TYCITYILSCITKHSPQYKVLMVGRVLGGI-ATSLLFSAFE 146 (454)
T ss_pred CccceeeecccchHHHHHHHHHHHHhhhcccccee----eehHHHHHHHHhhcCCceEEEeehhhhhhH-HHHHHHHHHH
Confidence 34566666666777888888999999999999644 344455555554443448999999999999 5566666666
Q ss_pred hh--hccCChhhhhHHHHHHHHHHH----hhhhhHHHhHHhh----------hhHHHHHHHHHHHHHHHHHHHHhccCCC
Q 013378 131 AY--ADNISERQRASAFGILLGVLS----ASFVCGTLAARFL----------STTSAFQAATIVSMLAAAYMRVFLKDDV 194 (444)
Q Consensus 131 ~~--~~~~~~~~r~~~~~~~~~~~~----lg~~~g~~l~~~l----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 194 (444)
++ .|..+ +|+.-.-+....++ +|.-+-.+++|.+ |.-.+|-..+.+..+...+....-.|..
T Consensus 147 sWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENy 224 (454)
T KOG4332|consen 147 SWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENY 224 (454)
T ss_pred HHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhcc
Confidence 65 55442 33332222222111 1211112222221 3355666555443333333222222322
Q ss_pred CCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcch-hHHHHHHHh
Q 013378 195 PNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM-QASFLYFLK 273 (444)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 273 (444)
.++.++ +.-....+...+.+..++++..+-....++-...+.+ ..|-|..--
T Consensus 225 gdps~~---------------------------kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLsp 277 (454)
T KOG4332|consen 225 GDPSEN---------------------------KDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 277 (454)
T ss_pred CChhhh---------------------------HHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCC
Confidence 221110 0000122333344556666655444444444333333 223332211
Q ss_pred hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc--hhHHHHHHHHHHHHHHHhhhcc----C---Cc-hHHHHHH
Q 013378 274 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE--AKLLSLGLFAACINMFICSISW----S---AW-VPYATTA 343 (444)
Q Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~---~~-~~~~~~~ 343 (444)
+.-+. --|.+++.+.+.+++++.+.. ++..|-.+ ...+.+.+....+.+.+...+. + +. .++..++
T Consensus 278 n~e~i---PhGfiFatFMlASmLGSSla~-Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~ 353 (454)
T KOG4332|consen 278 NDEEI---PHGFIFATFMLASMLGSSLAS-RLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCL 353 (454)
T ss_pred CcccC---CchhHHHHHHHHHHHhhHHHH-HHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHH
Confidence 11121 237888888888888886664 55544332 3445555555555444433322 1 11 2233555
Q ss_pred HHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHH
Q 013378 344 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 380 (444)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 380 (444)
+-...|..+|...-+-++..|++.|++.+-.+..--+
T Consensus 354 ~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 354 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhh
Confidence 6678888899999999999999999887766554333
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.88 E-value=8.9e-08 Score=92.01 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=89.3
Q ss_pred HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHH
Q 013378 266 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAF 344 (444)
Q Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 344 (444)
..++...+| .|-++ ...++.....+...+... +.|+++|.+|||+.++.+.++..++.++.+..++....+. ..+.
T Consensus 65 ~~l~~I~~d-iG~~~-~~~w~~~~~~l~~av~~~-~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 65 SILPYINAD-IGGSD-NWSWFSTAWTLASAVSFP-FVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHh-cCCCc-cchHHHHHHHHHHHHHHH-hhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 334444444 46554 446777777787777764 4589999999999999999999999999998888777776 6777
Q ss_pred HhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 345 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
|++.+... .....++|..|.+.|+...++.....-.....+|.+...+
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 88766554 4455689999999998777666544444444555554444
No 232
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=4.8e-08 Score=93.42 Aligned_cols=171 Identities=18% Similarity=0.275 Sum_probs=138.4
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccC--chHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLT 85 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G--rr~~l~ 85 (444)
+.+..+.+...+..++.....-.+|.+..+. +.+..+...+.++..+...++.+..|+++|+.. ++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~--------g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSL--------GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 4455666677777778777777888887644 344467788899999999999999999999988 556777
Q ss_pred HHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
+++++.+++...+.+.++ ++.+...-.+.|+ +.|......... .|..+.++-..+.|+.....+++.++||.+++
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~-~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGF-CVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 888888999999999999 9999999999999 557776555567 99999999999999999999999999999998
Q ss_pred hh-----hhHHHHHHHHHHHHHHHHHHHHhcc
Q 013378 165 FL-----STTSAFQAATIVSMLAAAYMRVFLK 191 (444)
Q Consensus 165 ~l-----~~~~~f~~~~~~~~~~~~~~~~~~~ 191 (444)
.+ +|...|+..+...++... .++..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~-~~~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAV-LLLILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHH-HHHHhH
Confidence 75 477888888877554443 334444
No 233
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=9.8e-08 Score=90.85 Aligned_cols=147 Identities=18% Similarity=0.206 Sum_probs=121.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|.+..+....++..++........+.+.++.+ +.+ ...+.+..+..++..++.+++++++||+|+|+.+..
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl--~~~------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL--GNE------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--cCc------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 566777788888888888888888888887765 222 245677788999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhcc--CchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChh-------hhhHHHHHHHHHHHhhh
Q 013378 87 PLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISER-------QRASAFGILLGVLSASF 156 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~-------~r~~~~~~~~~~~~lg~ 156 (444)
+..+.+++.++..+.+ + .+.+++.-++.|++. +...+...++ +|..+.+ +.|..++.......+|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi~~-~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGS---PWLVLILFILAGIGY-GAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred hHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHhhh-cccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 9999999999988886 6 899999999999955 6666788888 9998743 35778888888888888
Q ss_pred hhHHHhHHh
Q 013378 157 VCGTLAARF 165 (444)
Q Consensus 157 ~~g~~l~~~ 165 (444)
.+++.+.+.
T Consensus 372 ~la~~i~g~ 380 (428)
T PF13347_consen 372 GLAGAIVGL 380 (428)
T ss_pred HHHHHHHHH
Confidence 888877665
No 234
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.84 E-value=1.7e-07 Score=84.74 Aligned_cols=156 Identities=12% Similarity=0.014 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (444)
.++...+..|+...........++.|+.+. ...+.++.+.++..+.+..+..++.+..+++.||+|+||.+..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~-----~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDP-----HALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344444555554445666666778887543 234666788899999999999999999999999999999998888
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
.+..++.++....++ .... ..-++.|++. +..+|...+. .+..|++ .+++.++. ....+|..++|.+.|.+
T Consensus 216 ~l~~~~~~l~~~~~~---~~~~-~~~~l~g~~~-s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 216 FLAVLLSIGAALTHG---YVAM-WFVLALGLFN-SIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHcCC---HHHH-HHHHHHHHHH-HHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 888877766666555 3222 3444678844 6777888888 7777653 45566665 45668889999877765
Q ss_pred ---hhHHHHHHHH
Q 013378 167 ---STTSAFQAAT 176 (444)
Q Consensus 167 ---~~~~~f~~~~ 176 (444)
+.+.+|++..
T Consensus 289 d~~g~~~a~~v~~ 301 (310)
T TIGR01272 289 DCLGIQLAFALPV 301 (310)
T ss_pred HhccchHHHHHHH
Confidence 4466666443
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.82 E-value=1.1e-07 Score=91.54 Aligned_cols=147 Identities=14% Similarity=0.171 Sum_probs=106.9
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCc-hhHHHHHHHHHHH
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGE-AKLLSLGLFAACI 324 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~~~~~~~~ 324 (444)
..+..+..+........+++.|+.+.+|.++..+|.++.+..+...+...+. |+++|| +|| |+.+..+.+..++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~-G~lsD~t~sr~Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIM-GWIVNNTRSRWGKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchh-eeehhcCCCCCCCcchhHhhhhHHHHH
Confidence 3444555566666777889999999999999999999999999999998555 899994 587 5566677777777
Q ss_pred HHHHhhhccCC--c--hHH---HHHHHHhhhhhhhHHHHHHHhhcc-CCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 325 NMFICSISWSA--W--VPY---ATTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 325 ~~~~~~~~~~~--~--~~~---~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
++.++...++. . ..+ ...++..+.........++..|.. ++++|.+..+......++|+.+.+.+...+.+.
T Consensus 90 ~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~ 169 (473)
T PRK10429 90 VLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNY 169 (473)
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76555443321 1 111 123445677777788888889988 578999999987888888877777766666554
Q ss_pred h
Q 013378 397 F 397 (444)
Q Consensus 397 ~ 397 (444)
.
T Consensus 170 ~ 170 (473)
T PRK10429 170 V 170 (473)
T ss_pred h
Confidence 4
No 236
>PRK09669 putative symporter YagG; Provisional
Probab=98.81 E-value=6.6e-08 Score=92.50 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=103.6
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCc-hhHHHHHHHHHHHH
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGE-AKLLSLGLFAACIN 325 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~~~~~~~~~ 325 (444)
.+..+..+........+++.|+.+.+|+|+..+|.++.+..+...+...+. |+++|| +|| |+.+..+.+..+++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~-G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLM-GALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccccee-eEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 344444455555667788889999999999999999999999999998555 899998 555 45555666666666
Q ss_pred HHHhhhccCC------chHHH-HHHHHhhhhhhhHHHHHHHhhcc-CCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 326 MFICSISWSA------WVPYA-TTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 326 ~~~~~~~~~~------~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..+....++. +..++ ..+++.+.........++..|.. ++++|.+..+.......+|..+++.+...+....
T Consensus 94 ~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 94 CLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5544444321 11111 23445556666677778888877 4577999999999999999999888777776655
No 237
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.7e-07 Score=78.15 Aligned_cols=147 Identities=16% Similarity=0.186 Sum_probs=105.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+..+|.+.+..+.......-...+-|.+.++ .++.|+...+-+.+.-..-.++.+++.|.++||+|++...+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~-------rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQK-------RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-------hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 4557777777766666655444455555544 446666777888888888889999999999999999988877
Q ss_pred HHHHhH-HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 87 PLTLSI-IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 87 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
+..+.. ++-....|+. +.=+++..+.|+ +........... +...|+++.|++.+..+...++|..+.|++++
T Consensus 336 ~a~~~tl~~H~~l~Ft~-----lsPy~~m~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF-----LSPYTSMTFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHHhhhHHhhh-----ccHHHHHHHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 665544 4444444432 223456667788 544443334455 78899999999999999999999999999998
Q ss_pred hh
Q 013378 165 FL 166 (444)
Q Consensus 165 ~l 166 (444)
.+
T Consensus 410 ~i 411 (459)
T KOG4686|consen 410 FI 411 (459)
T ss_pred ee
Confidence 85
No 238
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.74 E-value=7.8e-07 Score=80.49 Aligned_cols=159 Identities=24% Similarity=0.304 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhH
Q 013378 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (444)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (444)
.....+....+.....+..+.+..+.. .+.. . ...++..+.+.++..++.++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLS---LSSG--R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcC---CCch--h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 344445555667777777777775541 1110 0 356888999999999999999999999999988888887666
Q ss_pred HHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCCh-hhhhHHHHHHHH-HHHhhhhhHHHhHHhh---
Q 013378 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISE-RQRASAFGILLG-VLSASFVCGTLAARFL--- 166 (444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~-~~r~~~~~~~~~-~~~lg~~~g~~l~~~l--- 166 (444)
++.+...+..+ ...+.+++.|+.+|+ +.+...+...++ .|+.|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGL-GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666654 337899999999999 446777888899 999988 789999998888 5888888888776653
Q ss_pred ---hhHHHHHHHHHHH
Q 013378 167 ---STTSAFQAATIVS 179 (444)
Q Consensus 167 ---~~~~~f~~~~~~~ 179 (444)
+||..|.......
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 159 LLWGWRAAFLLAALLG 174 (338)
T ss_pred HhcchHHHHHHHHHHH
Confidence 6888666665554
No 239
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.70 E-value=4e-06 Score=82.72 Aligned_cols=136 Identities=17% Similarity=0.136 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccc-cCchHHHHHHHHHhHHHHHHHHhccCc-----hhhHHHHHHHHhhhhcccch
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFYAYYALRTLTAMVCEGS 124 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~g~ 124 (444)
..+..+...+....-+...+.|.++|+ +||++.+.++.++..++..+.++.... ......+++-.+..+ +.|.
T Consensus 23 ~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~-G~Gg 101 (654)
T TIGR00926 23 STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL-GTGG 101 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh-hccc
Confidence 444555666666667778889999997 699999999999999998888775321 112334455555555 4466
Q ss_pred hhhhhhhh-hccCChh---hhhHHHHHHHHHHHhhhhhHHHhHHhh-----------hhHHHHHHHHHHHHHHHHHHH
Q 013378 125 INCLALAY-ADNISER---QRASAFGILLGVLSASFVCGTLAARFL-----------STTSAFQAATIVSMLAAAYMR 187 (444)
Q Consensus 125 ~~~~~~~~-~~~~~~~---~r~~~~~~~~~~~~lg~~~g~~l~~~l-----------~~~~~f~~~~~~~~~~~~~~~ 187 (444)
.-|...+. .|.++++ +|.+.+.++..+.++|.++++.+...+ +|...|.+.++..++..+...
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 77888888 9888754 467788888899999999887776554 378888888877655554443
No 240
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.69 E-value=9.7e-06 Score=74.81 Aligned_cols=375 Identities=12% Similarity=0.076 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc-----ccCchHHHH
Q 013378 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRKAMLT 85 (444)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l~ 85 (444)
.++.+..++.+.-.++....+|.++++. .-+.|..+.|. +|.....+- .-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~------~~~~sy~q~~~-fSla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSM------AKKVSYSQQAI-FSLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccc------cCCCChhHhee-eeeeechhH-HHHhhhhhhhhhcccccCCcchhh
Confidence 3455666777777777766778887651 11333344443 222222221 2345555555 799998766
Q ss_pred HHH-HHhHHHHHHHHhcc-------------------Cchhh--HHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhh
Q 013378 86 LPL-TLSIIPLAILAYRR-------------------SISFF--YAYYALRTLTAMVCEGSINCLALAY-ADNISERQRA 142 (444)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~-------------------~~~~~--~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~ 142 (444)
+-. .+.++..+..+... +.+.. ..+...-++.=+.+ +..-.+...+ -...++++++
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~-ATQDIAVDGWALT~Ls~~n~~ 153 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLC-ATQDIAVDGWALTMLSPENVG 153 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHH-ccCCceeehhhhhhcChhhcc
Confidence 433 23333333332221 00001 01112221222212 3444456666 5666778888
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHhhh-------h-H-----------HHH-HHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 013378 143 SAFGILLGVLSASFVCGTLAARFLS-------T-T-----------SAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDL 202 (444)
Q Consensus 143 ~~~~~~~~~~~lg~~~g~~l~~~l~-------~-~-----------~~f-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 202 (444)
.+......+.+.|..++-.+--.++ | | ..| .+.+...++.-+...++-+|.+..+..+ +
T Consensus 154 ~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~-~ 232 (544)
T PF13000_consen 154 YASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP-K 232 (544)
T ss_pred hHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc-c
Confidence 8877777777777666644322221 0 1 111 1223333344444445556654332211 1
Q ss_pred CCCcccccccccccCCCCCCCcCCccccCCchHHHHH---HhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcC
Q 013378 203 TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC---LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN 279 (444)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 279 (444)
.++....+.+..+...+.++.+....++..++++..+ .+.+-|.+..+.+.....-.++.........=+.|. |++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEk-G~~ 311 (544)
T PF13000_consen 233 IEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEK-GLS 311 (544)
T ss_pred ccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHc-CCC
Confidence 1111111110000000001101001111123333332 355677888888888888888888887777777776 999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc---------------------------hhHHHHHHHHHHH----HHHH
Q 013378 280 KNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------------------------AKLLSLGLFAACI----NMFI 328 (444)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------~~~~~~~~~~~~~----~~~~ 328 (444)
.++.+.+..+.-=..++...+. ++.+.--.+ -+....+...-.+ +...
T Consensus 312 KE~LAl~~li~~P~qii~~~~~-~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~i 390 (544)
T PF13000_consen 312 KEDLALLVLIDFPFQIILPYYI-GKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLI 390 (544)
T ss_pred HHHhHHHHHHhhhHHHHHHHHh-hhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHhe
Confidence 9986665433333333332222 333321111 0111122221111 1111
Q ss_pred hhhcc-C----CchHHHH----HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 329 CSISW-S----AWVPYAT----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 329 ~~~~~-~----~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
....+ + .+...+. .+-.+.....+....++-++..+|..=|+.+.+.|+..|+|+---..+.=++.|.+
T Consensus 391 V~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 391 VYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred EEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 11112 1 1111111 22234455667778888899999999999999999999999998888877787776
No 241
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.69 E-value=1.5e-06 Score=74.62 Aligned_cols=126 Identities=13% Similarity=0.194 Sum_probs=88.5
Q ss_pred HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC-------CchH
Q 013378 266 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-------AWVP 338 (444)
Q Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 338 (444)
..+...+++.+|+|.++...+.....++..++ +..|.+.|++|++.++.+|.+...++...+...-+ .|..
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 34455678889999999999888888888765 55589999999999999999999998877665321 2222
Q ss_pred HH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 339 YA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 339 ~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.. .++.+.+.............+.+| ++||++.|+.-....+++.+-..+...++
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 22 122233333334444455567888 68999999998888877666655554444
No 242
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.68 E-value=3.5e-06 Score=74.54 Aligned_cols=351 Identities=12% Similarity=0.011 Sum_probs=189.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc-----ccCch
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRK 81 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr 81 (444)
++.+..+.....+.+.-.+... .+|.+++.. +.|....+. .+..... ...-+.|.++.| |+|||
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~-fS~ay~P-~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAI-FSFAYWP-FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhh-hhhhhhH-HHHHHHHHhhhHHHHHHhhccc
Confidence 4566667777778888888888 889888532 222233232 1221222 234568999999 99999
Q ss_pred HHHHH-HHHHhHHHHHHHHhccC------c--hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHH
Q 013378 82 AMLTL-PLTLSIIPLAILAYRRS------I--SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGV 151 (444)
Q Consensus 82 ~~l~~-~~~~~~~~~~~~~~~~~------~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~ 151 (444)
|..+. +..+.+......+.-.+ . +....+...-++.-+ ..+....+...+ -...++++.|.+......+
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnf-laAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNF-LAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHH-HHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 86553 33333333333332211 0 002222223334444 225566677788 7788889988888877777
Q ss_pred HHhhhhhHHHhHHhh-----------hh---------HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcccccc
Q 013378 152 LSASFVCGTLAARFL-----------ST---------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEET 211 (444)
Q Consensus 152 ~~lg~~~g~~l~~~l-----------~~---------~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 211 (444)
.+.|..+|..+--.+ +| ..-.++.+.+.++.-.+..+.-+|.+....++
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----------- 246 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----------- 246 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-----------
Confidence 777777764332111 11 11223333343344333333323322221110
Q ss_pred cccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHH
Q 013378 212 EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG 291 (444)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 291 (444)
.. ...+...+.++...+-|............-.++.+.....+.-+.|. |.+.++.+......-
T Consensus 247 --------------~~-~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 247 --------------LE-LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPLV 310 (510)
T ss_pred --------------hh-cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeehh
Confidence 00 01112223344456667777777777778888888888888888787 999988766543322
Q ss_pred HHHHHHHHHHHHHHhhhhC------chhHHHHHHHHHHHHHHHh-h-hcc---CCc-hHHHH-----HHHHhhhhhhhHH
Q 013378 292 LAGTISQLLFMPLLAPILG------EAKLLSLGLFAACINMFIC-S-ISW---SAW-VPYAT-----TAFSVLVVFATPS 354 (444)
Q Consensus 292 ~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~---~~~-~~~~~-----~~~g~~~~~~~~~ 354 (444)
-..++.. ...|+...+.. ++....+........+... . +.+ ... ..++. .+.+......+..
T Consensus 311 plqI~l~-~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~ 389 (510)
T KOG3574|consen 311 PLQIALP-LYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVS 389 (510)
T ss_pred hHHHhhh-hhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHH
Confidence 2333332 22233332111 1111222222111111111 1 111 011 11111 2223444455666
Q ss_pred HHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 355 FRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 355 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.++..++..||...|+.+.+.|+..++|+-.-..+..++.|.+
T Consensus 390 ~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 390 GMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 7777899999999999999999999999999888999998876
No 243
>PRK11462 putative transporter; Provisional
Probab=98.67 E-value=8.2e-07 Score=85.06 Aligned_cols=147 Identities=16% Similarity=0.170 Sum_probs=108.0
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCch-hHHHHHHHHHHHH
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEA-KLLSLGLFAACIN 325 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~-~~~~~~~~~~~~~ 325 (444)
.+..+..+........++..|+.+..|.++..+|.++.+.-+...+...+. |+++|| +||| +.+..+.+..+++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~-G~~~D~t~~r~Gr~rp~il~g~i~~~i~ 93 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCM-GLLADRTRSRWGKFRPWVLFGALPFGIV 93 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhh-eehhccCCCCCCCcchhHhHHHHHHHHH
Confidence 344444555566667788888899999999999999999999999998555 899996 4664 4555676666666
Q ss_pred HHHhhhccC--Cc--hHHH---HHHHHhhhhhhhHHHHHHHhhccC-CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 326 MFICSISWS--AW--VPYA---TTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 326 ~~~~~~~~~--~~--~~~~---~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..++...++ .. ..+. ..++..+.........++..|..+ +++|.+..+.......+|..+++.+...+.+..
T Consensus 94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 94 CVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544432 11 1222 334566777777788888888776 578999999999999999999988887777665
Q ss_pred h
Q 013378 398 L 398 (444)
Q Consensus 398 ~ 398 (444)
+
T Consensus 174 g 174 (460)
T PRK11462 174 G 174 (460)
T ss_pred C
Confidence 3
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.1e-06 Score=83.34 Aligned_cols=155 Identities=19% Similarity=0.122 Sum_probs=116.8
Q ss_pred hhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhh
Q 013378 273 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFA 351 (444)
Q Consensus 273 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 351 (444)
++..+....+.+.+.+++.++.+++. +..+.+.||++..+.+....++..+..++....++.+.+++ -++.|+..+..
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~-~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQ-FPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHH-hhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 35567888899999999999999998 56689999999766666555555544444444667777766 68889999999
Q ss_pred hHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 352 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 352 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
.|....++...+.+++||..+|+.+....+|+++|+.+...+.+.- +.....+| ...|++-+++.+...+..++..|
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~-~~~~~~gW-~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLN-GSGGLAGW-RWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhc-CCCCcCCc-eeehhHHHHHHHHHHheEEEEec
Confidence 9999999999999999999999999999999999999988876632 22111112 22556666666666655554443
No 245
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.66 E-value=7.8e-07 Score=76.28 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=89.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCc----hhhHHHHHHHHhhhhc
Q 013378 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI----SFFYAYYALRTLTAMV 120 (444)
Q Consensus 45 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~ 120 (444)
.++.+..+...+.+...+|..+ +++.|.+.|++|+|.++.++.+...+|..+..++.+. ..+|.+.+..++.|.
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~- 108 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN- 108 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc-
Confidence 3355557778888888888876 5889999999999999999999999998887764211 126777777777777
Q ss_pred ccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 121 CEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 121 ~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
+.+....++... .+.+| ++||++.|+.-...+++..+-..+...
T Consensus 109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH
Confidence 435554555566 77887 589999999999999987775544443
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=1.6e-06 Score=84.37 Aligned_cols=112 Identities=15% Similarity=0.053 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHh
Q 013378 282 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVS 360 (444)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 360 (444)
+.+++.+...+++.+++ +..|+++|++|||+.+..+.+...++.++..++.+.+.+.. -++.|++.+........+.+
T Consensus 90 ~~s~~~s~~~lga~~g~-l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGS-LLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 34788999999999997 55589999999999999999999999999999998877777 57889999999999999999
Q ss_pred hccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 361 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 361 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
|..|++.||...+..+....+|..++ .+.+...+
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~ 202 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTS 202 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhc
Confidence 99999999999999999888888777 44444443
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=1.2e-07 Score=87.47 Aligned_cols=161 Identities=17% Similarity=0.205 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHh
Q 013378 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (444)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (444)
++++...+.+++.+.+...+=..+++. +......|........+-++.-++.+++..|+|+-+++.+++.+.
T Consensus 375 lff~~av~mG~g~~lv~tFLfWHled~--------~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~ 446 (618)
T KOG3762|consen 375 LFFFVAVVMGAGVGLVFTFLFWHLEDL--------GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACN 446 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhhc--------CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHH
Confidence 345556667777777777776655443 333456677788888888999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHH-HHhhhhhHHHhHHh----
Q 013378 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGV-LSASFVCGTLAARF---- 165 (444)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~-~~lg~~~g~~l~~~---- 165 (444)
.+=.+..+..+| .|+.+-..+++|+ ..+..+.+..+| ++..||+-|..+.++++.. .++|--+|.++++.
T Consensus 447 ~~Rf~~~S~L~n---~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 447 VGRFLYYSYLQN---PWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER 522 (618)
T ss_pred HHHHHHHHHhcC---chheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee
Confidence 999999999999 9999999999999 778888899999 9999999999999988755 46777777777776
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 013378 166 LSTTSAFQAATIVSMLAAA 184 (444)
Q Consensus 166 l~~~~~f~~~~~~~~~~~~ 184 (444)
++-|..|.+.++.+++.++
T Consensus 523 fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 523 FGARTTFRIFGIACLVTLA 541 (618)
T ss_pred ehhHHHHHHHHHHHHHHHH
Confidence 4668888877766554443
No 248
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.57 E-value=3.1e-06 Score=81.20 Aligned_cols=171 Identities=12% Similarity=0.110 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-----chhHHHHHHHHH
Q 013378 248 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-----EAKLLSLGLFAA 322 (444)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~ 322 (444)
.......+..+.. .......+.++++.+|.++.+.+.+.+...+...+-. +. |.++||++ ||+.+..+.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~-g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FA-GVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HH-HHHHHhcCCCCccchHHHHHHHHHH
Confidence 3444456666666 5566677888888889999999888888888888864 54 79999996 666666666555
Q ss_pred -HHHHHHhhhccCCch-HH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchh---HHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 323 -CINMFICSISWSAWV-PY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGK---AQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 323 -~~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~---~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
.++...+...++... .. ..++.+++.+.......++..|..+ ++++. ..+.......+|..+++.+.|.+.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 243333333233222 22 2455677777778889999999888 54443 34444455568999999999999887
Q ss_pred hhhcCCCcccchhHHHHHHHHHHHHHHHHHhccc
Q 013378 397 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 430 (444)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (444)
. +.+. .+.+.+++.++........++
T Consensus 185 ~-~~~~-------~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 185 T-LTRI-------LFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred c-Ccch-------HHHHHHHHHHHHHHHHHhccc
Confidence 5 3322 334444444444443444444
No 249
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.57 E-value=4.8e-05 Score=67.87 Aligned_cols=152 Identities=14% Similarity=0.007 Sum_probs=98.7
Q ss_pred hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhh
Q 013378 274 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 352 (444)
Q Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 352 (444)
+.+|++..+++.++......+.+...+. |.+.||+|||+..+...++..++++..- .++.+.+++ =++-|++....+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~-G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFV-GSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHH
Confidence 3579999999999888777777776455 8999999999998888888888876443 345555555 466678888777
Q ss_pred HHHHHHH-hh----ccCCCcchhHHHHHHHH-HHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHH
Q 013378 353 PSFRSIV-SK----QVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 426 (444)
Q Consensus 353 ~~~~~~~-~~----~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (444)
...-++. .| -+|++..+..++..... +.+-.+.+..+...+.+.. +. .+..+|.....+..++.+...
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~-~~-----g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF-GF-----GPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-CC-----CCcchHHHHHHHHHHHHHHHH
Confidence 7777764 33 34545455555544422 3333444444444555544 22 122255777777777777766
Q ss_pred hcccCCC
Q 013378 427 MMSHTPA 433 (444)
Q Consensus 427 ~~~~~~~ 433 (444)
...+|+.
T Consensus 214 ~~W~ENy 220 (354)
T PF05631_consen 214 KTWPENY 220 (354)
T ss_pred hcccccC
Confidence 6555553
No 250
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.56 E-value=5.7e-07 Score=83.49 Aligned_cols=150 Identities=13% Similarity=0.121 Sum_probs=114.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH
Q 013378 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (444)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (444)
+|.+..+.+..++...+.++.......|.+..+ +.+.....+.......+.+++.+++.++.+|+|+|+++.+
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l-------g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL-------GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc-------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 556666666777777888888888877765443 2233555677777788888889999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhh-------hhHHHHHHHHHHHhhhhh
Q 013378 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQ-------RASAFGILLGVLSASFVC 158 (444)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~-------r~~~~~~~~~~~~lg~~~ 158 (444)
+.++..++.++..+.+. +..+..++..++.+++. +...+...++ +|..+.+| -|...+.+....=+|..+
T Consensus 308 ~~~~~~i~~~~~~f~~~-~~~~l~~~~~~i~~~g~-~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 308 GLLLLAVGYLLLYFTPA-GSVVLIVVALIIAGVGT-GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHHHHHHHHHHHHhhcC-cchHHHHHHHHHHHHHh-hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 99999999999998873 22788888999988844 6777778888 88876432 466777888888888888
Q ss_pred HHHhHHh
Q 013378 159 GTLAARF 165 (444)
Q Consensus 159 g~~l~~~ 165 (444)
+..+.++
T Consensus 386 a~~~~g~ 392 (467)
T COG2211 386 AGFIPGW 392 (467)
T ss_pred HHHHHHH
Confidence 7665554
No 251
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.56 E-value=5.8e-07 Score=79.16 Aligned_cols=127 Identities=18% Similarity=0.214 Sum_probs=94.3
Q ss_pred HHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchh-hHHHHHHHHhhhhcccchhhhhhhhh-hccCC
Q 013378 60 IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF-FYAYYALRTLTAMVCEGSINCLALAY-ADNIS 137 (444)
Q Consensus 60 ~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~ 137 (444)
..+.-+.+.++.+.+.||+|||+.+..+.+++++..++.....+.+. ..+++.+|+... +.+ .+.+.| .|.+|
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~f-qvaYvYtPEVyP 464 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAF-QVAYVYTPEVYP 464 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chh-eEEEEecCcccc
Confidence 34666778889999999999999999999999999888777654221 245566676543 334 368899 99999
Q ss_pred hhhhhHHHHHHHHHHHhhhhhHHHhHHhhh--hHHHHHHHHHHHHHHHHHHHHhccC
Q 013378 138 ERQRASAFGILLGVLSASFVCGTLAARFLS--TTSAFQAATIVSMLAAAYMRVFLKD 192 (444)
Q Consensus 138 ~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~--~~~~f~~~~~~~~~~~~~~~~~~~e 192 (444)
.+-|+...|.-+.+.-+|.++.|+++-..+ -..+..+.+.+.++..+.. .++|-
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIav-cffPi 520 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAV-CFFPI 520 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHh-eeeee
Confidence 999999999999999999999999984432 2345555565555554444 44553
No 252
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.52 E-value=9.6e-07 Score=86.38 Aligned_cols=120 Identities=14% Similarity=0.059 Sum_probs=105.7
Q ss_pred hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhh
Q 013378 274 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 352 (444)
Q Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 352 (444)
+.++.+........++..++..++. ++.|.++||+|||+++..+..+..++.+..++.++.+...+ -++.|++.+...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~-~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGS-LIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHH-hhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 4446666777777888888888987 55589999999999999999999999999999999888777 578899999999
Q ss_pred HHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 353 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
.....+..|.+++++|+.+..+ ......++.+++...+++.+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 88888899999999888887
No 253
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.50 E-value=9.2e-06 Score=71.86 Aligned_cols=166 Identities=17% Similarity=0.115 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccccc-CchHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~ 88 (444)
-|.+.+..-+..+..+....-+|.+..|. +.|..+.|++.+...+.++..++....+++|. ++|+..+...
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~--------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDR--------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHc--------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34444444566666777778889998665 56668889999999999999999999999965 5778888888
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCC-hhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNIS-ERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
.++.++...+.+.+....++ .-++.|+|. |..+|.+... .+..+ +++-++..++.|....+=...||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~l----w~~llG~G~-G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPIL----WALLLGLGQ-GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHH----HHHHHhCcc-chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 88888888888887632121 148889955 6666788888 66654 44555555555555555456689998886
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHH
Q 013378 167 -----STTSAFQAATIVSMLAAAYMRV 188 (444)
Q Consensus 167 -----~~~~~f~~~~~~~~~~~~~~~~ 188 (444)
+|+.+........++..+..+.
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 7888877777665555444443
No 254
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.39 E-value=0.00098 Score=63.47 Aligned_cols=246 Identities=12% Similarity=0.109 Sum_probs=144.7
Q ss_pred HHHHHHHHHHH-HHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc---------cCc-------------hh--
Q 013378 52 LSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR---------RSI-------------SF-- 106 (444)
Q Consensus 52 ~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~~-------------~~-- 106 (444)
....+-....+ ...+......+++||++|++++-.....+.....+.++. ++. .+
T Consensus 59 ~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i 138 (491)
T PF03219_consen 59 VIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFI 138 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHH
Confidence 33444443333 344557778999999999998887777766666655542 110 00
Q ss_pred ----hHHHHHHHHhhhhcccchhhh-hhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhhh-------------
Q 013378 107 ----FYAYYALRTLTAMVCEGSINC-LALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFLS------------- 167 (444)
Q Consensus 107 ----~~~l~~~r~l~G~~~~g~~~~-~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~------------- 167 (444)
.|...+..+..-+.+ ....+ .-..+ .|.++.+|-.|..+++..+.++|.++++.+...+.
T Consensus 139 ~~~~~Wt~slfYv~aElwg-svvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~ 217 (491)
T PF03219_consen 139 AMFRNWTFSLFYVMAELWG-SVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDA 217 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 122223333333311 22222 23566 89999999999999999999999999876665542
Q ss_pred hHHHHH-HHHHH--HHHHHHHHHHhccCCCCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhccc
Q 013378 168 TTSAFQ-AATIV--SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 244 (444)
Q Consensus 168 ~~~~f~-~~~~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
|...+. +.+++ +.+........+.+...++++. .....++++++++.+.++.++.+.++
T Consensus 218 ~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~------------------~~~~~~~kk~k~k~s~~es~k~l~kS 279 (491)
T PF03219_consen 218 WELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRF------------------YPSAKKKKKKKPKMSLKESFKLLLKS 279 (491)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc------------------chhhhcccccCCCccHHHHHHHHHhC
Confidence 221111 11111 1122222222333221111110 00111233344555888999999999
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchh----HHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 318 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (444)
|.+..+.+....++..........-..+++.+. ++.+ .|......++...+.. ++++.+.+|+|-+....+.
T Consensus 280 ~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 280 KYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 999999988888888887777666666666543 3333 2444566677777775 6668999999977655443
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.38 E-value=2e-05 Score=77.80 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=103.9
Q ss_pred hhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHHHHHHHHHHHHHhhhccCC---
Q 013378 260 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFICSISWSA--- 335 (444)
Q Consensus 260 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 335 (444)
.++++...+..|+.+.+|++...+..++.......-+.. ++++++.|+ +|+++.+..+.++..++..++.+...+
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 456777888888888889998887776666655555554 666899985 799999999999988888877664321
Q ss_pred --c----hHHHHHHHHhhhhhhhHHHHHHHhhccCCCc---chhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 336 --W----VPYATTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 336 --~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
+ ..+.+.+..+|.+..-|...+...|.+++++ +-+.+.++....++|+.+++.+.+++-+..
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1222556678888889999999998887543 567888888899999999999988886543
No 256
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.38 E-value=2.1e-05 Score=71.21 Aligned_cols=166 Identities=19% Similarity=0.183 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc-ccCchHHHHHHH
Q 013378 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-QYGRKAMLTLPL 88 (444)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~ 88 (444)
....+...++..+++.+..+++-.| +.+-++.+..+..-+.+....+.+++-...|++.. |.++|+.-.+++
T Consensus 210 a~~f~~fl~l~t~a~~~QD~iLEPy-------gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~ 282 (403)
T PF03209_consen 210 ARRFFVFLFLGTLAFFMQDVILEPY-------GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGC 282 (403)
T ss_pred hhHHHHHHHHHHHHHHhhHHHcCCc-------hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 3445556667777888877777766 45566777788888899999999999999998877 678888888888
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh-
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL- 166 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l- 166 (444)
....++..+..++......+.+...-++.|+ +.|.+.....+. .|..++++.|..+|.+...+.++.-+|..+++..
T Consensus 283 ~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~-g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 283 LLGALAFALIILAGPLGSPWLFRPGVFLLGL-GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776665554322227899999999999 558887778888 9999999999999999999988888888777663
Q ss_pred -------------hhHHHHHHHHHHHHHHH
Q 013378 167 -------------STTSAFQAATIVSMLAA 183 (444)
Q Consensus 167 -------------~~~~~f~~~~~~~~~~~ 183 (444)
+|..+|.+-++..+++.
T Consensus 362 D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 362 DLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 34556666665544333
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.37 E-value=1.6e-06 Score=59.53 Aligned_cols=69 Identities=20% Similarity=0.215 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHH
Q 013378 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (444)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (444)
-...++...+.+...|.+|.+.++. +.+..++|++.++..+...++.+++|.++||++|++..+.....
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~--------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQL--------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3445667777899999999998543 77779999999999999999999999999999998877765544
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.34 E-value=7.1e-06 Score=74.73 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=89.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC---C----chHHH-HHHHHhhhh
Q 013378 278 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS---A----WVPYA-TTAFSVLVV 349 (444)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~-~~~~g~~~~ 349 (444)
+++...+.+..+..++.++++.+. |++.||+|||++....++++.++.++.+.... + +.+.+ =+++|+|.|
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~F-G~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFF-GWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHH-HHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 556667888888899999999555 89999999999999998888888875555432 1 11112 366799999
Q ss_pred hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 350 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.-+|...++.+|...++.||+-.+..-..+..|...|..+.-.+.
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 999999999999999999999888877777766666655444333
No 259
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.31 E-value=3.6e-06 Score=58.18 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=68.1
Q ss_pred HHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHH
Q 013378 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (444)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~ 99 (444)
.+++...+.|.+|.+.+|. +.|..+.|++.+...+|++++.+...++.++..+++.+..+.+...+..+.++
T Consensus 4 mGigRFayTplLP~M~~~~--------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADG--------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hhhHHHHHHhHhHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3566788899999987443 66778999999999999999999999999998889999999999999999999
Q ss_pred hccC
Q 013378 100 YRRS 103 (444)
Q Consensus 100 ~~~~ 103 (444)
+.++
T Consensus 76 ~~~~ 79 (85)
T PF06779_consen 76 LTHS 79 (85)
T ss_pred HHhc
Confidence 9988
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.25 E-value=3.5e-05 Score=70.28 Aligned_cols=129 Identities=13% Similarity=-0.015 Sum_probs=88.4
Q ss_pred HHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCC---chHH--H-
Q 013378 267 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA---WVPY--A- 340 (444)
Q Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~- 340 (444)
-...|..+.|| +...+-+...++.+..+... +.+-|+.||+|-|....++....+++..+=.....+ ..+. +
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g-f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~ 143 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFG-FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLT 143 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHh-hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhh
Confidence 34456666677 66666777778888888886 555699999999999999999998888765554332 1111 1
Q ss_pred ---HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 341 ---TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 341 ---~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
..+.+.........-.-+..-.+|+++|+++..+..+...+|.+++..+...+..+.
T Consensus 144 ~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 144 HTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 222222222222222233455689999999999999999999999988887777653
No 261
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.24 E-value=4.3e-06 Score=71.73 Aligned_cols=319 Identities=15% Similarity=0.063 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh
Q 013378 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (444)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (444)
.|.+.-.--+...+..+.+....||+.--.=..+...+.+.+..+.+++++ .++-+.+-.+..+++ |.--..-.++
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSiss-GlGEiTFL~l 139 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASISS-GLGEITFLAL 139 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhhcC-Ccceeehhhh
Confidence 366666677888888888888999864332233455677788888899998 787777777777733 4332223333
Q ss_pred hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh------hhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCC-CCCCCCC
Q 013378 133 ADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD-DDDLTRP 205 (444)
Q Consensus 133 ~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~------l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~ 205 (444)
+..+++. ..+.++.+.+.+.++|..--.. +..|...++...+.++.+...++.+++++.... .-++..+
T Consensus 140 ss~Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~ 215 (409)
T KOG3880|consen 140 SSRYPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE 215 (409)
T ss_pred hccCCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce
Confidence 3333322 2222333333333444321111 244777777777666665555666665544332 1111111
Q ss_pred cccccccccccCCCCCCCcCCccccCCchHHHHHHhccchhHHHHHHHHHHHHhhhcch-hHHHHHHHhh-ccCcCc---
Q 013378 206 IITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM-QASFLYFLKA-QFHFNK--- 280 (444)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~--- 280 (444)
...++..+.+. .+ .+.........++.++.+ +.+...++-.+...+..+.+ +...+...-+ .-|.+.
T Consensus 216 ~~~~~~~~~~a-~e----~~sv~s~~~~~~e~~~~i---~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~ 287 (409)
T KOG3880|consen 216 IIPSQYLPFEA-AE----EKSVPSRRLGLKETLKRI---KPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKD 287 (409)
T ss_pred eccCCCCcccc-cc----cccCchhhhcHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchh
Confidence 11111111000 00 000111111333333222 22222333333333333322 2222322211 113322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH------HHHHHHhhhccCCchHHHHHHH-HhhhhhhhH
Q 013378 281 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA------CINMFICSISWSAWVPYATTAF-SVLVVFATP 353 (444)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 353 (444)
.++-++.....++..+.+ =+-|+=+-+.+..-.++. .+.-..+.++++.|...+.+++ |+..|..+.
T Consensus 288 sqYRwyqvlYQlGVFiSR------SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISR------SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hcchhhheeeeeeEEEEe------ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 234455555544433332 111221222222222222 2222344556667766665444 777777787
Q ss_pred HHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 354 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 354 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
...--+.+..++++|--+++.......+|-.++..+.=.+
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 7777788888889999999998888888877777655333
No 262
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.22 E-value=0.00054 Score=64.69 Aligned_cols=50 Identities=12% Similarity=0.096 Sum_probs=41.3
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 340 ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 340 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
..+++|+..|........+..+.+++++|..+..+....-.+|-.+|..+
T Consensus 378 ~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 378 LMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37788999998888888888989999999888887787778787777754
No 263
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.21 E-value=3.4e-05 Score=61.01 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hcc
Q 013378 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADN 135 (444)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~ 135 (444)
.++......+..++.+.+.+++|.|+.++++.+...+-.... +-++ .+.++.+-.+.|+ +.+..+.+.-.+ .+.
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~---~~~l~~~s~l~G~-~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN---SYTLYPASALLGF-GAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh---HHHHHHHHHHHhh-hhHHhhHhhhHHHHHc
Confidence 344455566666777888999999999999999888655543 4566 7899999999999 558888888888 999
Q ss_pred CChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 136 ISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 136 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
.++++|++..+++-.....+.++|.++.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888888887654
No 264
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.19 E-value=2.4e-08 Score=95.84 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc---CCchHHH-HHHHHhhhhhhhHHHHH
Q 013378 282 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVPYA-TTAFSVLVVFATPSFRS 357 (444)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~~ 357 (444)
..+...+...++..+++ +..|++.||+|||+.+..+..+..++.++..+.+ +.+.+.. -++.|++.+...+....
T Consensus 47 ~~~~~~~~~~~g~~~G~-~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGA-LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHhhhcccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45777888888888997 5558999999999999999999999999999888 7676666 57789999999999999
Q ss_pred HHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHH
Q 013378 358 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 391 (444)
Q Consensus 358 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 391 (444)
++.|..|+++|+...++.+....+|..++..+.-
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999888888888776543
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.19 E-value=0.00012 Score=68.54 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=105.6
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhh-ccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCc-hhHHHHHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAA 322 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 322 (444)
|.++...+..++....+.......-.|+++ ..+-+.+..|+..+...++..+.+... ++...|.+. |+-+..+.+++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF-~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIF-GIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhh-cccccccCCcccCHHHHHHHH
Confidence 455666777777777777666666667765 136777788999999999999998555 688888774 67778888888
Q ss_pred HHHHHHhh-hc--cCCc--hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 323 CINMFICS-IS--WSAW--VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 323 ~~~~~~~~-~~--~~~~--~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.++.++.. .. ++.+ ..++ =++.|++.+ ......+++++..-.++|.++++..+....+|.++||.+...+.
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 88888773 32 2212 2222 244455544 46677888888777889999999998888899999997654443
No 266
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.08 E-value=0.00016 Score=68.37 Aligned_cols=131 Identities=16% Similarity=0.171 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchh
Q 013378 291 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 370 (444)
Q Consensus 291 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 370 (444)
++...+.+..+ |.++||+|||..+........+..+.+.+.. .|.. +..-...+.+.......+++++...+++|..
T Consensus 72 ~~~~~i~s~~i-G~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~-~~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLI-GALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFF-LLLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhh-HHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHh-hhcccccchhhhhhhhhhheeeccchhHHHH
Confidence 56667776455 8999999999999888887777766665544 2222 2111233455667888899999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcccCC
Q 013378 371 AQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 432 (444)
Q Consensus 371 ~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (444)
..|+.+.....+..++|.+.+.+.+.. + ....+.+..+..++..++.....||.
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~-~-------~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFL-G-------IALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhc-C-------chHHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999998874 2 33366777778888887777666654
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.08 E-value=4.1e-05 Score=52.55 Aligned_cols=71 Identities=23% Similarity=0.260 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 249 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
.+-...++..........++|.|+++. |+|+.++|.+.++..+...++..+. |.++||.++++........
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~-Gl~~~~iGil~~i~~~~~~~~~pl~-g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQL-GLSPSQIGILSAIRPLIRFLAPPLW-GFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhc-CCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCccHHHHHHHHH
Confidence 344566677777788899999999875 9999999999999999999998555 8999999998877655443
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.08 E-value=0.0096 Score=55.50 Aligned_cols=254 Identities=11% Similarity=0.097 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHH-HHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhc---------cC----------ch----h
Q 013378 51 YLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR---------RS----------IS----F 106 (444)
Q Consensus 51 ~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----------~~----~ 106 (444)
....++-+..-+ +..+..++.+++.++..|++++-.-...+....+++++. ++ .+ +
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 345666666666 667888899999999999999998888877777777653 11 00 0
Q ss_pred ------hHHHHHHHHhhhhcccchhhh-hhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhh----------
Q 013378 107 ------FYAYYALRTLTAMVCEGSINC-LALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFLST---------- 168 (444)
Q Consensus 107 ------~~~l~~~r~l~G~~~~g~~~~-~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~---------- 168 (444)
.|..-+.....-+ -+....+ .-... .|.++.+|-.|.++.++...+++..++..+..+++-
T Consensus 141 ~ili~~~Ws~s~~Yi~aEL-WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~ 219 (509)
T COG3202 141 FILIVGEWSYSLFYIMAEL-WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFK 219 (509)
T ss_pred eeEeecchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHH
Confidence 0333333333333 1122222 22334 788889999999999999999999988777766532
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhccCC-CCCCCCCCCCCCcccccccccccCCCCCCCcCCccccCCchHHHHHHhcc
Q 013378 169 ----TSAFQAATIVSMLAAAYMRVFLKDD-VPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 243 (444)
Q Consensus 169 ----~~~f~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (444)
+..+.+.+..++++.. ...++.+. .+++.-. .....+++.++.+....+.++.+.+
T Consensus 220 ~~~~~~~~~vi~~~~~i~~~-l~~~~~r~il~~~~f~------------------~~~~~kk~~~k~k~~~~~s~k~i~~ 280 (509)
T COG3202 220 DLLLQILFIVIVILGIIAIL-LYRYINRNVLTDPLFY------------------LRAKKKKKKKKLKLGLIESFKMILR 280 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhhcccCcchh------------------HHHhcccccccccCcHHHHHHHHHh
Confidence 2223333333323322 22222221 1111100 0000022223344577888888999
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchh---HHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ---FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
+|.++.+.+...+++.....+....-.-.++.+..+.+. .|.+....++...+.....++.+.+|.|-.....+.-+
T Consensus 281 SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPi 360 (509)
T COG3202 281 SKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPL 360 (509)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHH
Confidence 999999888888888877766655444444443333222 24445566666566666777888999887665554444
Q ss_pred HHHH
Q 013378 321 AACI 324 (444)
Q Consensus 321 ~~~~ 324 (444)
...+
T Consensus 361 v~li 364 (509)
T COG3202 361 VMLI 364 (509)
T ss_pred HHHH
Confidence 3333
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.98 E-value=0.0038 Score=57.07 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=39.3
Q ss_pred CchHHHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 335 AWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
.|......++|+..|-.......+..+.+|++++-.+-.+....-..|-+.|. +.+++.
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l~ 402 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWVF 402 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHHH
Confidence 34444478889999988888889999999887776555544444444444444 445544
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.97 E-value=0.00028 Score=66.90 Aligned_cols=155 Identities=19% Similarity=0.297 Sum_probs=103.2
Q ss_pred HHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CchhHHHHHHHHHHHHHHHhhhccC----Cc
Q 013378 266 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKLLSLGLFAACINMFICSISWS----AW 336 (444)
Q Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 336 (444)
.-...|+++.+|.++.+...+.....+...+= .+. |.++|-+ +||.-+.++.++..++.+.+...+. ..
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~-g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLY-GLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhH-HhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 33456778889999999888888777777766 355 7999965 3555666677776555555554433 22
Q ss_pred hHH-HHHHHHhhhhhhhHHHHHHHhhccC--CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHH
Q 013378 337 VPY-ATTAFSVLVVFATPSFRSIVSKQVG--PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMC 413 (444)
Q Consensus 337 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (444)
... ..++..++.........+.+.|... ++.+|...+.......+|+.++..+.|.+.+.. +++..+ .+
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f-------~i 159 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVF-------LI 159 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEe-------hH
Confidence 222 2445566777777777877776662 233788899999999999999999999998875 444433 44
Q ss_pred HHHHHHHHHHHHHhccc
Q 013378 414 IGLASMVAFIQSLMMSH 430 (444)
Q Consensus 414 ~~~~~~~~~~~~~~~~~ 430 (444)
.+.+..+..+......+
T Consensus 160 ~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 160 SAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 44444444434443443
No 271
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.97 E-value=0.0076 Score=58.82 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccc-CchHHHHHHHHHhHHHHHHHHhcc----------------------CchhhH
Q 013378 52 LSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIPLAILAYRR----------------------SISFFY 108 (444)
Q Consensus 52 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 108 (444)
.+.-..+.+.-......+..+.++|-| ||-+++.++.++..++..+..++. +..+..
T Consensus 74 ~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~ 153 (571)
T KOG1237|consen 74 GAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLA 153 (571)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHH
Confidence 334445666666677778899999975 898999988888877755443321 101234
Q ss_pred HHHHHHHhhhhcccchhhhhhhhh-hccCC---hhh---hhHHHHHHHHHHHhhhhhHHHhHHh----hhhHHHHHHHHH
Q 013378 109 AYYALRTLTAMVCEGSINCLALAY-ADNIS---ERQ---RASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATI 177 (444)
Q Consensus 109 ~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~---~~~---r~~~~~~~~~~~~lg~~~g~~l~~~----l~~~~~f~~~~~ 177 (444)
.++.+.-+..+|. |..-|...+. +|.++ +++ +...+.++....+.|..++..+-.+ .+|.+.|.+..+
T Consensus 154 ~~~~~l~lia~G~-gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~ 232 (571)
T KOG1237|consen 154 VLYGALYLIALGA-GGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTV 232 (571)
T ss_pred HHHHHHHHheecc-CCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHH
Confidence 6667777777744 6667888899 99998 322 2356778888888888887655443 488888877776
Q ss_pred HHHHHHH
Q 013378 178 VSMLAAA 184 (444)
Q Consensus 178 ~~~~~~~ 184 (444)
...++.+
T Consensus 233 ~~~lai~ 239 (571)
T KOG1237|consen 233 LNALAIL 239 (571)
T ss_pred HHHHHHH
Confidence 6444433
No 272
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.78 E-value=0.0015 Score=51.75 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcc
Q 013378 290 AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQ 368 (444)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 368 (444)
......+.. +..+.+.+++|.|+.+.++.+...+-...... ++.+.++. ..+.|++.+..+...-.++.+..+++++
T Consensus 46 ~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 46 LYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 333444554 55688999999999999998888765554433 33444444 6788999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 369 GKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 369 g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
++..++.-.+.+.+.++|....-.+.
T Consensus 124 ~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888886654444
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.66 E-value=0.0051 Score=56.75 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=100.0
Q ss_pred cchhHHHHHHHhhc-cCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH
Q 013378 262 GGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 340 (444)
Q Consensus 262 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (444)
--...++..|+.+. .|++.++..--......=+-+...+....+.|..+.|++++.+.+...+...++.+.++.+..-+
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~ 99 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQL 99 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence 34577888888776 79998876544444443334444455678899999999999999998888888888887655544
Q ss_pred -HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 341 -TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 341 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
-+..|...+ ...+.++++-..+|+++--++.+......-+|..++..++-.+..
T Consensus 100 ~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 100 MQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566554 477778888888899999999999999999999988877666655
No 274
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.40 E-value=0.0093 Score=53.53 Aligned_cols=136 Identities=16% Similarity=0.147 Sum_probs=94.0
Q ss_pred hhhcchhHHHHHHHhhccCcCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccC--
Q 013378 259 LSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-- 334 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 334 (444)
..........+.+..+. +.+. ...+.......+...++. ...|++.||.|||+.+..+......+.+...+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 33334444555555554 4443 356777888888888876 56689999999997777776654444444444444
Q ss_pred CchHHH-HHHHHhhhhhhhHHHHHHHhhccCC-CcchhHHHHHHH-HHHHHHHHhHHHHHHHHHh
Q 013378 335 AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISG-ISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 335 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~ 396 (444)
.+.... ....|++.+...+...++..+..|+ ++|+...+.... ....+..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 3335777888889999999999987 678888888888 5778888888777777665
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.34 E-value=0.031 Score=53.21 Aligned_cols=125 Identities=11% Similarity=-0.015 Sum_probs=82.2
Q ss_pred HhhccCc-----CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc-----cC-------
Q 013378 272 LKAQFHF-----NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS-----WS------- 334 (444)
Q Consensus 272 ~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------- 334 (444)
++|.+.. +.+...++.+..-+.+.+.-..+.+++++|++|+++...........+.++++. +.
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~ 108 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALA 108 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHH
Confidence 3565554 335667766666565555522444799999999988766555555544444332 00
Q ss_pred -------------------CchHHHHH-HHHhhhhhhhH-HHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHH
Q 013378 335 -------------------AWVPYATT-AFSVLVVFATP-SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 393 (444)
Q Consensus 335 -------------------~~~~~~~~-~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 393 (444)
.|...... ...+......+ ..+++++|....++..+-.++.....++|..+++.+..++
T Consensus 109 ~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 109 DKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 22333444444 8889999999999999999999999999999999988887
Q ss_pred HHh
Q 013378 394 TAL 396 (444)
Q Consensus 394 ~~~ 396 (444)
.+.
T Consensus 189 ~~~ 191 (472)
T TIGR00769 189 SKL 191 (472)
T ss_pred HHh
Confidence 753
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.25 E-value=5.7e-05 Score=73.21 Aligned_cols=138 Identities=10% Similarity=0.082 Sum_probs=2.6
Q ss_pred hhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhcc-----
Q 013378 259 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----- 333 (444)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 333 (444)
....++....-.-++++|+++..+.|.+.+..-++..+...++ .+..+|..|-+.+..|.++++++.+++.+.+
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~v-sy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFV-SYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 3344444444445788999999999999999999999987444 6888887777888888888888887766421
Q ss_pred ------C---------------------------------------CchHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc
Q 013378 334 ------S---------------------------------------AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE 367 (444)
Q Consensus 334 ------~---------------------------------------~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 367 (444)
+ .+.+++ .++.|+|....++...+++-|.+++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 0 001112 456688888899999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 013378 368 QGKAQGCISGISSFANIVSPLIFSPLTALF 397 (444)
Q Consensus 368 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 397 (444)
.+...|+......+|-++|=.++|...+.+
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~y 204 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIY 204 (539)
T ss_dssp ------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhce
Confidence 999999999999999999888888777654
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.23 E-value=0.0031 Score=43.78 Aligned_cols=75 Identities=15% Similarity=0.125 Sum_probs=61.9
Q ss_pred hcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCch
Q 013378 261 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 337 (444)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (444)
-+.+...+|...+|. ++|..+.|++-+...++..++. +...++.++.++++.+..+.+...+..+.+++.++.+.
T Consensus 8 RFayTplLP~M~~~~-~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 8 RFAYTPLLPLMQADG-GLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred HHHHHhHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 344566777777665 9999999999999999999997 55578888888888999999999999999988877654
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.15 E-value=0.0033 Score=61.93 Aligned_cols=189 Identities=9% Similarity=0.088 Sum_probs=133.8
Q ss_pred cchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHH
Q 013378 243 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 322 (444)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (444)
+.+.+..++....+......++....-.-++++++++..+.|++....-++..+...++ .+...|..|-+.+..|.+++
T Consensus 94 ~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fV-sYfG~r~HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 94 NIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFV-SYFGSRGHRPRWIGIGLVLM 172 (735)
T ss_pred CcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhH-HHhccccCccceeeechhHH
Confidence 33444444433333333333555555566788999999999998888888888886444 68888888888888888888
Q ss_pred HHHHHHhhhcc-----------------------------------------------C----CchHHH--HHHHHhhhh
Q 013378 323 CINMFICSISW-----------------------------------------------S----AWVPYA--TTAFSVLVV 349 (444)
Q Consensus 323 ~~~~~~~~~~~-----------------------------------------------~----~~~~~~--~~~~g~~~~ 349 (444)
+++.++..+.+ + +|.+.+ .++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 88887765420 0 111222 456688888
Q ss_pred hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhc-CC--------Ccccchh---HHHHHHHH
Q 013378 350 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK-GA--------PFNFPGF---SIMCIGLA 417 (444)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~-~~--------~~~~~~~---~~~~~~~~ 417 (444)
..++...+++-|.+.+++.....|+..++..+|-++|=.+++.....+.+. .. |- |.|. .|++++.+
T Consensus 253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPr-WIGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPR-WIGAWWLGFLICGAL 331 (735)
T ss_pred CCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcc-hhhHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999888776544 11 22 3332 45677777
Q ss_pred HHHHHHHHHhcccCCC
Q 013378 418 SMVAFIQSLMMSHTPA 433 (444)
Q Consensus 418 ~~~~~~~~~~~~~~~~ 433 (444)
.++..+..+..+++.+
T Consensus 332 ~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 332 LLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHhCcccCc
Confidence 7777777776665543
No 279
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.98 E-value=0.11 Score=44.63 Aligned_cols=48 Identities=0% Similarity=-0.133 Sum_probs=30.4
Q ss_pred hhhhHHHHHHHHHHHhhhhhH--HHhHH-------hhhhHHHHHHHHHHHHHHHHHH
Q 013378 139 RQRASAFGILLGVLSASFVCG--TLAAR-------FLSTTSAFQAATIVSMLAAAYM 186 (444)
Q Consensus 139 ~~r~~~~~~~~~~~~lg~~~g--~~l~~-------~l~~~~~f~~~~~~~~~~~~~~ 186 (444)
|+|+....+...+.++|.++. |.+.. .-.|++.+.+.+++.++-+++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly 58 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILY 58 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666677777887764 44333 1279999888887765544433
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.85 E-value=0.022 Score=53.56 Aligned_cols=150 Identities=18% Similarity=0.197 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhcccccc---ccCchHHHH
Q 013378 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD---QYGRKAMLT 85 (444)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D---r~Grr~~l~ 85 (444)
.+..+....+..++.......+.|.-+.-.. ..-..+....++-.-...++..+++...+.+++ |+||++.+.
T Consensus 241 ~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~----~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 241 KMLLLFPFFFYTGLETSFWISIYPTCISFTR----KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhhhhhh----hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 3444455555555666666666665442221 110111133344444455666666666777665 579999999
Q ss_pred HHHHHhHHHHHHHHhccC--c-------------hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHH
Q 013378 86 LPLTLSIIPLAILAYRRS--I-------------SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILL 149 (444)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~--~-------------~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~ 149 (444)
++..+..++.++.-.... . +.+....+.-++.|+ +.+......+.+ .+.. +++|..+.++..
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k 394 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLFK 394 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHHH
Confidence 999888888777654311 0 014577788899999 667877778888 8888 678888999888
Q ss_pred HHHHhhhhhHHHhHH
Q 013378 150 GVLSASFVCGTLAAR 164 (444)
Q Consensus 150 ~~~~lg~~~g~~l~~ 164 (444)
.-..++..++-....
T Consensus 395 fyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 395 FYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHhhhhh
Confidence 888877766544443
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.81 E-value=0.062 Score=48.33 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=53.9
Q ss_pred hhhHHHHHHHHHHHHHHHhHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHH
Q 013378 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (444)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (444)
+....++.+.++...+.-+..-....++.+. +.+..- .+..-...-....++..++.|...|+..|+|++...
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L---~gnsl~----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILL---GGNSLL----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHH---cCceeh----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 3445677778888888777766677777665 222222 223334444556678888999999999999998877
Q ss_pred HHHhHHHH
Q 013378 88 LTLSIIPL 95 (444)
Q Consensus 88 ~~~~~~~~ 95 (444)
+.+.-++.
T Consensus 100 L~lqNlSv 107 (503)
T KOG2601|consen 100 LLLQNLSV 107 (503)
T ss_pred HhhccHHH
Confidence 76554443
No 282
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.63 E-value=0.011 Score=55.24 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=74.7
Q ss_pred HHHHHHHHHhHHHHHHHHhcc--Cc----hhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChh---hhhHHHHHHHHH
Q 013378 82 AMLTLPLTLSIIPLAILAYRR--SI----SFFYAYYALRTLTAMVCEGSINCLALAY-ADNISER---QRASAFGILLGV 151 (444)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~--~~----~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~---~r~~~~~~~~~~ 151 (444)
|.++++.++..+|.++..++. .. ...+.++++-.+.++|. |..-|...++ +|.++++ +|.+.+.++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~-G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGT-GGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHH-HCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhcc-ccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 567788888888888854432 11 11367888888899944 7778889999 9999765 577788899999
Q ss_pred HHhhhhhHHHhHHhh----hhHHHHHHHHHHHHHHHH
Q 013378 152 LSASFVCGTLAARFL----STTSAFQAATIVSMLAAA 184 (444)
Q Consensus 152 ~~lg~~~g~~l~~~l----~~~~~f~~~~~~~~~~~~ 184 (444)
.++|..+++.+.+++ +|.+.|.+.++..++..+
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHH
Confidence 999999998777664 789999988877554443
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.0022 Score=58.98 Aligned_cols=145 Identities=12% Similarity=0.079 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCchh-HHHHHH
Q 013378 245 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAK-LLSLGL 319 (444)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~-~~~~~~ 319 (444)
+++.......+...+.+..-..+.++|+++. |.+....+.......+.+.+.+.+. |..+|| +|||| .+..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~v-G~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLV-GSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccc-cccccccccccccccchHHHhh
Confidence 3445556666667777777788999999876 9999988888888888999998666 799995 67765 455566
Q ss_pred HHHHHHHHHhhhccC--------Cc-----hHHHHHH-----HHhhhhhhhHHHHHHHhhccCCCcchh-HHHHHHHHHH
Q 013378 320 FAACINMFICSISWS--------AW-----VPYATTA-----FSVLVVFATPSFRSIVSKQVGPNEQGK-AQGCISGISS 380 (444)
Q Consensus 320 ~~~~~~~~~~~~~~~--------~~-----~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~ 380 (444)
....++++++.+... .. ..+..++ .-+..........++..|...++++.+ +++.......
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence 667777777766532 11 1111222 234555667788889999988888877 9999998888
Q ss_pred HHHHHhHHHHH
Q 013378 381 FANIVSPLIFS 391 (444)
Q Consensus 381 ~g~~~~~~~~g 391 (444)
+|+.+|-.+.+
T Consensus 190 vGnvLGY~~g~ 200 (498)
T KOG0637|consen 190 VGNVLGYALGS 200 (498)
T ss_pred hcceeeeeccc
Confidence 88888776554
No 284
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.28 Score=47.79 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=79.0
Q ss_pred HHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH---HHHHH-
Q 013378 251 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA---ACINM- 326 (444)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~- 326 (444)
....++..++.........-.+...+|-+....+.+.+.+..+..+++ .+++++.++..++. ...-..+ ..++.
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ 97 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRDAAAGF-VAVELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHHH-HHHHHHHHHHHHHHHH
Confidence 334444444444455555555555568888877887777777777776 44456553322222 1111111 11111
Q ss_pred HHh---hhccCCch-HH-HHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 327 FIC---SISWSAWV-PY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 327 ~~~---~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
++. .+...... .+ ..++.++..|...|....+..+.. .++.|+..|-......+|+++|+.+.+++.-
T Consensus 98 ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 98 ILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 111 11001111 11 234457778888888777666432 2345677888889999999999999888875
No 285
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.43 E-value=0.097 Score=47.38 Aligned_cols=141 Identities=12% Similarity=0.095 Sum_probs=75.6
Q ss_pred chhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----hhCchhHHHH-
Q 013378 244 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-----ILGEAKLLSL- 317 (444)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~- 317 (444)
++++..+.......+....... .+|..++.. |.|-++.+....... -..+ -.+. ..++| |+|||+..++
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak-~vSyt~~a~fS~ay~-P~sL-KllW-aPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK-GVSYTSQAIFSFAYW-PFSL-KLLW-APIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC-Ccchhhhhhhhhhhh-HHHH-HHHH-HhhhHHHHHHhhccccceeee
Confidence 3556666666666666664444 888888755 777666544322211 1111 1122 34555 9999875433
Q ss_pred HHHHHHHHHHHhhhccCCc---------hHHH---HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHH
Q 013378 318 GLFAACINMFICSISWSAW---------VPYA---TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 385 (444)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 385 (444)
+..+....+..+....+.+ .... .+++-+..+.--.+...+...+..+++.|-+........+.|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 3334444444444322211 1111 223333444444566667777788888887776666666666666
Q ss_pred hHHH
Q 013378 386 SPLI 389 (444)
Q Consensus 386 ~~~~ 389 (444)
+..+
T Consensus 185 ~~~i 188 (510)
T KOG3574|consen 185 GNVV 188 (510)
T ss_pred hcce
Confidence 6544
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.33 E-value=0.027 Score=52.50 Aligned_cols=109 Identities=12% Similarity=0.071 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHHHhhhcc--C-C------chHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc---chhHHHHHHHHH
Q 013378 313 KLLSLGLFAACINMFICSISW--S-A------WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGIS 379 (444)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~--~-~------~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~ 379 (444)
+.+..+.++..++.+++.... . . +.++. +.++++|.|+.-|...++..|.+++++ |.+.+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 456777788888877744332 1 1 33444 677899999999999999999998763 466778889999
Q ss_pred HHHHHHhHHHHHHHHHhhhhcCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013378 380 SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 429 (444)
Q Consensus 380 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (444)
++|..+++.+.+++-+.. ++ ...|.+.++..+++.+..+.-+
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~-------~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GW-------FLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--H-------HHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhcccc-ch-------hhhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999887654 22 2244666666666555544443
No 287
>PRK03612 spermidine synthase; Provisional
Probab=96.21 E-value=0.31 Score=47.52 Aligned_cols=117 Identities=14% Similarity=-0.020 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHH-HHHHhH-HHHHHHHhccCc--hhhHHHHHHHHhhhhccc
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI-IPLAILAYRRSI--SFFYAYYALRTLTAMVCE 122 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~-~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~ 122 (444)
+.+....+.+.+++.++..+|+.+.|++.++--|+...+- ...+.+ ++..+....... .....++..-++.++ ..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL-LI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 3344566888999999999999998887644323222111 111111 111111111110 001222333445566 33
Q ss_pred chhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHh
Q 013378 123 GSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARF 165 (444)
Q Consensus 123 g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 165 (444)
|...|....+ .+... ++-++..|.......+|.++|.++.++
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 5556666666 44322 234556677777777787777776655
No 288
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.18 E-value=0.16 Score=47.15 Aligned_cols=108 Identities=12% Similarity=0.164 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHH--HhHH---HHHHHHhccCchhhHHHHHHHHhhhhcccchh
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT--LSII---PLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~--~~~~---~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~ 125 (444)
.+..+-..+|.+|-+++.--.-.+ |+ |++.+.+.+ +..+ .....-+.++ .|..++.-+..|+ .+|..
T Consensus 281 ~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGL-lGGa~ 352 (402)
T PF02487_consen 281 DQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGL-LGGAS 352 (402)
T ss_pred HHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-hhhHH
Confidence 455666778888877765433221 33 333333332 2222 2223334567 8889999999999 54777
Q ss_pred hhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhh
Q 013378 126 NCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFL 166 (444)
Q Consensus 126 ~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 166 (444)
+...... .|..++++|..+++..+.+-++|..++.+++-.+
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 7677777 8888999999999999999999999988877553
No 289
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.91 E-value=0.22 Score=46.88 Aligned_cols=126 Identities=13% Similarity=0.018 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHH---hccCc----hhhHHHHHHHHhhhh
Q 013378 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA---YRRSI----SFFYAYYALRTLTAM 119 (444)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~----~~~~~l~~~r~l~G~ 119 (444)
+.++.+.|..-+...+..+.+.....++.+|+|..|.=.++.....++..++. +.+.. .....++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 66668889999999999999999999999999998877777765544433332 22221 113444444444444
Q ss_pred cccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhhHHHHH
Q 013378 120 VCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQ 173 (444)
Q Consensus 120 ~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~f~ 173 (444)
|--+... ...-+ .|..|++|||...|.-....++-.++-..++-.+....-|.
T Consensus 369 GLW~fDL-~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~ 422 (432)
T PF06963_consen 369 GLWSFDL-AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFG 422 (432)
T ss_pred HHHhhhH-HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcC
Confidence 3335565 45555 99999999999999999988888887766665554433333
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.76 E-value=0.0032 Score=56.88 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=3.6
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHH
Q 013378 339 YATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 389 (444)
Q Consensus 339 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 389 (444)
+..+++|+..|........+..+.+++++|..+-.+....-..|-.+|..+
T Consensus 253 i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 253 ILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------HHHH---------------------------------
T ss_pred HHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999998889999999999998998887777777777777776644
No 291
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.43 E-value=3.5 Score=36.91 Aligned_cols=69 Identities=13% Similarity=0.030 Sum_probs=44.0
Q ss_pred HHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccC
Q 013378 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNI 136 (444)
Q Consensus 63 ~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~ 136 (444)
.-+.++.+.+.+..++|-|..+.++...+......- +-+. +..++-.-...|++. +..+..--++ ++..
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr---~~tlVPa~~~~G~aa-~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPR---YETLVPAGLVLGMAA-GPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchh---HHhhccHHHhhcccc-ccccccCcceecHHH
Confidence 334444445578899999999998877665443221 2233 678888889999944 6665554455 4443
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.68 E-value=1 Score=42.91 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCch-HHHHHHHHHhHHH---HHHHHhcc------CchhhHHHHHHHHhhhhc
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK-AMLTLPLTLSIIP---LAILAYRR------SISFFYAYYALRTLTAMV 120 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr-~~l~~~~~~~~~~---~~~~~~~~------~~~~~~~l~~~r~l~G~~ 120 (444)
+..-....++.++-.+|..+..+.. .-++| +.+.+..+.-.+. .++|..-+ -.+.-+..++..++.|+
T Consensus 307 ~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl- 384 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF- 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-
Confidence 3556778889999999988665431 11222 1333333333322 22332211 00114667778999999
Q ss_pred ccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 121 CEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 121 ~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
.+|.....+..+ .+..+++||..+-.+...+..+|..+|..++
T Consensus 385 tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 385 SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888 8889999999999999999999988887664
No 293
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.04 E-value=2.5 Score=41.67 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=94.9
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCchhHHHHHHHHHHHHHHH
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFI 328 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 328 (444)
.+....+-..++.+....+-.|+.+.++.+...+.-............. +.+++++|- +||-+++.++..+..++..+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 3444455556666666777788888888888766666665555555553 666899995 68888888887777777554
Q ss_pred hhhccC--------------------Cc-----hHHH-HHHHHhhhhhhhHHHHHHHhhccCCCc----c--hhHHHHHH
Q 013378 329 CSISWS--------------------AW-----VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE----Q--GKAQGCIS 376 (444)
Q Consensus 329 ~~~~~~--------------------~~-----~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--g~~~g~~~ 376 (444)
+..... +. .++. ..+..+|.+..-|...++-.|.++++. + ..-+....
T Consensus 121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y 200 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY 200 (571)
T ss_pred HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence 433210 00 1122 344566888888999999988888322 2 35666777
Q ss_pred HHHHHHHHHhHHHHHHHHHh
Q 013378 377 GISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 377 ~~~~~g~~~~~~~~g~l~~~ 396 (444)
...+.|..++-.+.-++-+.
T Consensus 201 f~~~~g~l~a~t~~vyiq~~ 220 (571)
T KOG1237|consen 201 FSQNGGALLAQTVLVYIQDN 220 (571)
T ss_pred HHHHHHHHHHHHHHHhhhhc
Confidence 77888888777666555443
No 294
>PRK15015 carbon starvation protein A; Provisional
Probab=92.85 E-value=11 Score=37.31 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=60.8
Q ss_pred HHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhh--hccCCh
Q 013378 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY--ADNISE 138 (444)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~--~~~~~~ 138 (444)
.....++..-+|.++-+-|..-- +..+..++...+..+.. ++.-++.+=+.+. -..-..|+..-. .|+.|.
T Consensus 11 ~~~a~~ga~~~~~~al~rge~mn---al~lv~aa~~~y~iaYr---fYgr~ia~kv~~l-D~~r~TPA~~~~DG~DYvPt 83 (701)
T PRK15015 11 TVLSVMGAFALGYIALNRGEQIN---ALWIVVASVCIYLIAYR---FYGLYIAKNVLAV-DPTRMTPAVRHNDGLDYVPT 83 (701)
T ss_pred HHHHHHHHHHheeeeecCCCchh---HHHHHHHHHHHHHHHHH---HHHHHHHHHhccC-CCCCCCCceECCCCCCcCcC
Confidence 44556677778888877776522 11222222223333333 4555555556666 444555655555 677776
Q ss_pred hhhhHHHHH-HHHHHHhhhhhHHHhHHhhhhH
Q 013378 139 RQRASAFGI-LLGVLSASFVCGTLAARFLSTT 169 (444)
Q Consensus 139 ~~r~~~~~~-~~~~~~lg~~~g~~l~~~l~~~ 169 (444)
+++ ..+|- +....+.|.++||.++..+||-
T Consensus 84 ~k~-VLfGHHFasIAGAGPivGPvlAa~~Gwl 114 (701)
T PRK15015 84 DKK-VLFGHHFAAIAGAGPLVGPVLAAQMGYL 114 (701)
T ss_pred Ccc-chhHHHHHHHhccCccHHHHHHHHHcch
Confidence 655 45554 4555678999999999999995
No 295
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.45 E-value=5.6 Score=38.43 Aligned_cols=42 Identities=12% Similarity=0.013 Sum_probs=38.0
Q ss_pred HHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013378 354 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 395 (444)
Q Consensus 354 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 395 (444)
..+.+++|..+.++..+..++.....++|..+++.+...+.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999999999999999888887777
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.95 E-value=7.7 Score=33.63 Aligned_cols=27 Identities=7% Similarity=0.053 Sum_probs=12.4
Q ss_pred cchhHHHHHHHhhcc----CcCchhHHHHHH
Q 013378 262 GGMQASFLYFLKAQF----HFNKNQFADLML 288 (444)
Q Consensus 262 ~~~~~~~~~~~~~~~----g~~~~~~~~~~~ 288 (444)
++....=..|.+++- +-+.....+.++
T Consensus 195 yGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs 225 (254)
T PF07857_consen 195 YGSNFVPVIYIQDHPDIYPGASQNGLDYVFS 225 (254)
T ss_pred HhcccchHHHHHhCccccCCCCCcchheeHH
Confidence 344444445666653 334444444443
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.92 E-value=0.96 Score=39.13 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=52.6
Q ss_pred HHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHhhhh
Q 013378 271 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVV 349 (444)
Q Consensus 271 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~ 349 (444)
|+.+.+|+...++|.++.......++.+ .+.|-+.||.|||+.-..-.+...++++.= ..++.-.+.+ -.+-|+...
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFG-tivgSLaDkqGRKracvtycitYiLsCiTK-hSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFG-TIVGSLADKQGRKRACVTYCITYILSCITK-HSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHH-HHHHHHHhhhccccceeeehHHHHHHHHhh-cCCceEEEeehhhhhhHHHH
Confidence 4455678888888877654433444443 444799999999997654444444444311 1222222333 345566666
Q ss_pred hhhHHHHHH-Hhhcc
Q 013378 350 FATPSFRSI-VSKQV 363 (444)
Q Consensus 350 ~~~~~~~~~-~~~~~ 363 (444)
..+...-++ +.|..
T Consensus 140 LLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHhh
Confidence 667766665 45554
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.76 E-value=2.6 Score=40.15 Aligned_cols=142 Identities=14% Similarity=0.082 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHhh-ccCcCchhHHHHHH--HHHHHHHHHHHHHHHHHhhhhCchhHHHH-HHHHHHH
Q 013378 249 QAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLML--IAGLAGTISQLLFMPLLAPILGEAKLLSL-GLFAACI 324 (444)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 324 (444)
.+.+.+++.+..........|..+++ .-+.|..+.|.... ...-.-.+-+.++=..-.+|+|||+..++ ...+.++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~ 83 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGI 83 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHH
Confidence 45566677777766556778888887 11555555443221 11111222223333344568999876443 3333333
Q ss_pred HHHHhhhcc-----------------C--CchH-----HHHH-HHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHH
Q 013378 325 NMFICSISW-----------------S--AWVP-----YATT-AFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS 379 (444)
Q Consensus 325 ~~~~~~~~~-----------------~--~~~~-----~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 379 (444)
.++.+...- + .... ...+ ++-+..+---.+...+......+++++-+.......+
T Consensus 84 ~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~ 163 (544)
T PF13000_consen 84 LMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQ 163 (544)
T ss_pred HHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHh
Confidence 333333211 0 0101 1111 1112222222444555566677788887776555566
Q ss_pred HHHHHHhHHHH
Q 013378 380 SFANIVSPLIF 390 (444)
Q Consensus 380 ~~g~~~~~~~~ 390 (444)
+.|.+++-.++
T Consensus 164 ~~Gyfls~tvF 174 (544)
T PF13000_consen 164 TAGYFLSFTVF 174 (544)
T ss_pred hhhHHHHHHHH
Confidence 66666655444
No 299
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.51 E-value=5.6 Score=37.00 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=83.8
Q ss_pred hHhHhHHHHHHHhhCCCCcchhhHHHHHHHHHHH-HHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHH-----
Q 013378 26 MVVPAITDVTMMALCPGLDECSLAIYLSGFQQAI-IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA----- 99 (444)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~-~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~----- 99 (444)
+...+.|.+..+.. ++...+.+..-++..+ +.+...+|.+.+.++-++= ||.. .+...+..+..-+..
T Consensus 261 VTLsiFPg~~~~~~----~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~~ 334 (406)
T KOG1479|consen 261 VTLSIFPGFCSEVK----SSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNYP 334 (406)
T ss_pred eeeEecchhhcccc----cCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhccC
Confidence 33446676665531 2222244666777777 8999999977777766654 3333 333333333222222
Q ss_pred ----hccCchhhHHHHHHHHhhhhcccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 100 ----YRRSISFFYAYYALRTLTAMVCEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 100 ----~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
+-.+ -+++++.-.+.|+ +.|-.....+.+ .+..+++|+..+-.+.......|...|..++
T Consensus 335 ~~~v~~~~---~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 335 PLPVVFES---DGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CCCceecC---chHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 1233 4777888899999 778888888888 8889999998888888888888877776654
No 300
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=86.45 E-value=16 Score=31.39 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=35.8
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHh-hccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 320 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (444)
+..|.++..+...|+.-++--.....+..-.. +.+|.- .|-. ..-.++..+. .+.+..++.|+..|.+...|.+
T Consensus 204 ffspifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~---~G~~-iGH~lCT~lA-VigGk~lAskIS~rtVt~~ggi 278 (294)
T KOG2881|consen 204 FFSPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVA---IGAI-IGHALCTGLA-VIGGKYLASKISVRTVTLIGGI 278 (294)
T ss_pred hccHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceee---eccH-HHHHHHHHHH-HhhhHHHhhhheeEEEEEecch
Confidence 34566777666666665554433333222221 122211 1111 1111222222 2344567788888877666555
Q ss_pred HHHH
Q 013378 321 AACI 324 (444)
Q Consensus 321 ~~~~ 324 (444)
++.+
T Consensus 279 ~Fi~ 282 (294)
T KOG2881|consen 279 LFII 282 (294)
T ss_pred hHHH
Confidence 4443
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=84.38 E-value=3 Score=35.97 Aligned_cols=147 Identities=14% Similarity=0.041 Sum_probs=80.0
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 321 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (444)
+++-.+....+...+.-.....-+.+++.|..+..+++....+++-.+..+.+...+.+..-.--++.+.|.....|.+.
T Consensus 198 F~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgii 277 (412)
T KOG4830|consen 198 FGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGII 277 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHH
Confidence 34455666667777777766677888888888777777666555555555554444322210001122223334445555
Q ss_pred HHHHHHHhhhccCCchHH---HHHHHHhhhhhhhHHHHHHHhhccCCC--cchhHHHHHHHHHHHHHHHhHH
Q 013378 322 ACINMFICSISWSAWVPY---ATTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPL 388 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~ 388 (444)
...+...+.+.+..+-.+ +..++|+..........++......++ ..+-..|..+....+...++-.
T Consensus 278 wifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~ 349 (412)
T KOG4830|consen 278 WIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQ 349 (412)
T ss_pred HHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHH
Confidence 554444444444333322 245567777766665555555555433 3455666667777666555443
No 302
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=82.64 E-value=0.44 Score=43.06 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=3.4
Q ss_pred HHHHHHHHHHHHHhhhcccccccc-CchHHHHHHHHHhHHH---HHHHHh----------ccCchhhHHHHHHHHhhhhc
Q 013378 55 FQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIP---LAILAY----------RRSISFFYAYYALRTLTAMV 120 (444)
Q Consensus 55 ~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~---~~~~~~----------~~~~~~~~~l~~~r~l~G~~ 120 (444)
.....+.++-.+|....++.--+. .+|.+.. ..+.-.+. .++|-. .++ -+..++.-++.|+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~---d~~~~i~~~l~g~- 260 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNS---DAWFIILMLLFGF- 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccc---hHHHHHHHHHHHH-
Confidence 456788889998888777532111 2444333 33222222 222211 122 3666778889999
Q ss_pred ccchhhhhhhhh-hccCChhhhhHHHHHHHHHHHhhhhhHHHhH
Q 013378 121 CEGSINCLALAY-ADNISERQRASAFGILLGVLSASFVCGTLAA 163 (444)
Q Consensus 121 ~~g~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 163 (444)
.+|-.....+.+ .+..+++||..+-.+......+|..+|..++
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------HHHH----------------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888 9999999999998898888888888887665
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.88 E-value=11 Score=27.30 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHHHHHHhhhhcCCCc
Q 013378 365 PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 404 (444)
Q Consensus 365 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 404 (444)
++.++.+.++--....+++++.....||+.|++ -...|+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~-agTsPw 75 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF-AGTSPW 75 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCcH
Confidence 345678888888888999999999999999998 444443
No 304
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.78 E-value=7.6 Score=34.63 Aligned_cols=73 Identities=15% Similarity=0.035 Sum_probs=52.4
Q ss_pred HHhHHHHHHHHhccCchhhHHHHHHHHhhhhcccchhhhhhhhhhccCChhhhhHHHHHHHHHHHhhhhhHHHhHH
Q 013378 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYADNISERQRASAFGILLGVLSASFVCGTLAAR 164 (444)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 164 (444)
+++.+...+..+.++ +|..++.-+.-|+-+++.+...-..+.+-.++++|-.+++.....-++|..++..++-
T Consensus 327 l~ff~~~a~~~ftps---i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPS---IWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHhccH---HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 344555566677888 8888899999999554444322333355567789999999999998888888776654
No 305
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=74.31 E-value=51 Score=27.68 Aligned_cols=48 Identities=10% Similarity=0.101 Sum_probs=22.5
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--hCchhHHHHHHHHHHHH
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLSLGLFAACIN 325 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 325 (444)
|.+.........+............+.++.++ .+++. +.-|.++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 44444444444444444444433444444444 35544 55555555544
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.26 E-value=9.8 Score=27.54 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccc-CchHHHHHHHHHh
Q 013378 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLS 91 (444)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~ 91 (444)
....++-.+.-+++..+.....||+.||| |-++..++..++.
T Consensus 41 ~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 41 GYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34455666777888888888899999996 5566555444443
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=72.18 E-value=97 Score=29.91 Aligned_cols=117 Identities=12% Similarity=-0.015 Sum_probs=71.6
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc---------c-----------CC--
Q 013378 279 NKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------W-----------SA-- 335 (444)
Q Consensus 279 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----------~~-- 335 (444)
+++...++-...-+ .+++.. .+..++.++..+.++...-.......++++++. + .+
T Consensus 59 gae~I~FlK~~~vlP~avif~-~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFT-IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred cchhhHHHHHHHhchHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 45555555554444 233333 444788999998887765555555444444421 0 01
Q ss_pred ----------chHHHHHHHH-hhhh-hhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 013378 336 ----------WVPYATTAFS-VLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 396 (444)
Q Consensus 336 ----------~~~~~~~~~g-~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 396 (444)
|......+++ .-.. ...-..+...+|....++..+-.++.+...+++..++..+..++.++
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2212222222 2222 22336677889999989999999999999999988888888777664
No 308
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=71.28 E-value=67 Score=29.24 Aligned_cols=24 Identities=38% Similarity=0.667 Sum_probs=17.3
Q ss_pred HHHHHhhhhCchhHHHHHHHHHHH
Q 013378 301 FMPLLAPILGEAKLLSLGLFAACI 324 (444)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~~ 324 (444)
+.+.+.+++|.|+.+.++......
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 335888999999998766555443
No 309
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=65.31 E-value=23 Score=32.31 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=67.0
Q ss_pred HHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchHHHH-HHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHH
Q 013378 304 LLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 382 (444)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 382 (444)
.+.|....|++++.-.+.......++.+.++.+..=++ +..|.. .....+.++++-+.++++++-++.|.+....-.|
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~-tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g 142 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA-TAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVG 142 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChH-HHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHH
Confidence 56788888888777666666677777777776654442 333333 3456777888888899999999999999888888
Q ss_pred HHHhHHHHHHHHHh
Q 013378 383 NIVSPLIFSPLTAL 396 (444)
Q Consensus 383 ~~~~~~~~g~l~~~ 396 (444)
...|..++-.+.+.
T Consensus 143 ~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 143 KFVGSVLAQLLVSL 156 (433)
T ss_pred hHHHhHHHHHHhhh
Confidence 88888777666553
No 310
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=55.99 E-value=1.8e+02 Score=27.43 Aligned_cols=60 Identities=18% Similarity=0.103 Sum_probs=30.7
Q ss_pred ccchhHHHHHHHHHHHHhhhcchhHHHHHHHhh----------ccCcCchhHHHHHHHHHHHHHHHHHHH
Q 013378 242 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA----------QFHFNKNQFADLMLIAGLAGTISQLLF 301 (444)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (444)
++++.+....+..++....+.....-+-.++++ ..+....+.+++...+.+.+++.....
T Consensus 295 L~Rg~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~ 364 (536)
T COG3559 295 LNRGSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFA 364 (536)
T ss_pred eccCccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666665554433333322 123334444566666666666655433
No 311
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=54.73 E-value=2e+02 Score=27.53 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=26.7
Q ss_pred CChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhh
Q 013378 136 ISERQRASAFGILLGVLSASFVCGTLAARFLST 168 (444)
Q Consensus 136 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 168 (444)
+.+++.+...++.+.+.+.|.+.-|+..+..|.
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~Gf 49 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGL 49 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcchH
Confidence 456678889999999999999999988776543
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=54.29 E-value=1.8e+02 Score=26.86 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=34.9
Q ss_pred chHHH-HHHHHhhhhhhhHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHhHHHHHHHH
Q 013378 336 WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 394 (444)
Q Consensus 336 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 394 (444)
+.++. ..++|...|.-.|..+.+.++... +.....+......++|...+..+..++.
T Consensus 106 ~Vly~lt~vIG~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 106 LVLYALTAVIGVLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 34444 577788888889999998877222 2222233334447777777666655554
No 313
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=51.93 E-value=1.5e+02 Score=25.19 Aligned_cols=40 Identities=25% Similarity=0.172 Sum_probs=25.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhC---chhHHHHH
Q 013378 278 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILG---EAKLLSLG 318 (444)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~ 318 (444)
-|+.+-+..+..++++....- +..|..++++. |++....+
T Consensus 161 gS~~~Gal~mlaFGlGTlP~l-l~~G~~s~~~s~~~r~~~~rl~ 203 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNL-LAMGIFSSKLSKSSRKRLNRLS 203 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 466666777777888777663 55577777653 44444443
No 314
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=49.07 E-value=51 Score=22.82 Aligned_cols=19 Identities=5% Similarity=0.095 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013378 169 TSAFQAATIVSMLAAAYMR 187 (444)
Q Consensus 169 ~~~f~~~~~~~~~~~~~~~ 187 (444)
|+-.++.+++-+++++.+.
T Consensus 23 RYGLf~GAIFQliCilAiI 41 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAII 41 (85)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 6666677777655554443
No 315
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=46.99 E-value=3e+02 Score=27.21 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCc
Q 013378 289 IAGLAGTISQLLFMPLLAPILGE 311 (444)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~~ 311 (444)
...+.+.+++ ..++++-+.++.
T Consensus 305 ~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 305 LYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHhhHHH-HHHHHHHHHcCC
Confidence 3344444443 444566665553
No 316
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=46.01 E-value=1.2e+02 Score=26.47 Aligned_cols=103 Identities=13% Similarity=0.127 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHhhhccccccc-cCchHHHH----HHHHHhHHHHHHH-HhccCc-hhhHHHHHHHHhhhhcccchhh
Q 013378 54 GFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT----LPLTLSIIPLAIL-AYRRSI-SFFYAYYALRTLTAMVCEGSIN 126 (444)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~----~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~r~l~G~~~~g~~~ 126 (444)
....-++..+..++....|+++.. +.||+.+. .+++...+..+.. .+.++. .....+++.-++.|.+.-|..
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ- 222 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ- 222 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh-
Confidence 444556667777777888888874 45555443 3344444444442 122221 125678888888888553433
Q ss_pred hhhhhhhccCChhhhhHHHHHHHHHHHhhhh
Q 013378 127 CLALAYADNISERQRASAFGILLGVLSASFV 157 (444)
Q Consensus 127 ~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 157 (444)
++...+.+.+++.++.+.--.++..+++|.+
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHH
Confidence 3333333333333333333334444555543
No 317
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=41.59 E-value=1e+02 Score=26.29 Aligned_cols=12 Identities=25% Similarity=0.329 Sum_probs=6.6
Q ss_pred hcchhHHHHHHH
Q 013378 261 EGGMQASFLYFL 272 (444)
Q Consensus 261 ~~~~~~~~~~~~ 272 (444)
..+....+|.++
T Consensus 147 ~ggliPLlp~~~ 158 (225)
T cd02434 147 VFGIIPLLPYLL 158 (225)
T ss_pred HHHHHHHHHHHH
Confidence 345566666554
No 318
>PRK11469 hypothetical protein; Provisional
Probab=39.59 E-value=2.2e+02 Score=23.55 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=30.3
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHh
Q 013378 277 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 329 (444)
Q Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
|.+......................+.++.+++++|.-+.-|.++..++.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444555566667777777777777777766543
No 319
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=37.37 E-value=85 Score=19.59 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=21.4
Q ss_pred HHHHHHHHhhhccccccc-cCchHHHHHHHHHhHHH
Q 013378 60 IGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIP 94 (444)
Q Consensus 60 ~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~ 94 (444)
......+.....|+..|+ ++.++...+...+.++.
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 345555666678888886 57666666555544443
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=35.63 E-value=46 Score=24.24 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhcc
Q 013378 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (444)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (444)
.|-+.++|.-.+.+.++.+++..|+..+.+-=.++..+..++..+..+.|
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 37778888889999999999999999887777777777777766655543
No 321
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=35.22 E-value=3.9e+02 Score=25.19 Aligned_cols=146 Identities=12% Similarity=0.053 Sum_probs=71.5
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHhhccCcCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHH------
Q 013378 250 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC------ 323 (444)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------ 323 (444)
+....++..+.--........|+.+..|-|-...+..-.+-+....+...++ |...|+..|++++...+.+.-
T Consensus 32 Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~iv-Gq~vDg~sr~Kvi~~~L~lqNlSv~va 110 (503)
T KOG2601|consen 32 LYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIV-GQWVDGMSRVKVIQTWLLLQNLSVIVA 110 (503)
T ss_pred hhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHH-HHHhcchhHHHHHHHHHhhccHHHHHH
Confidence 3455555555555555566677766655444443443334444444444455 677888888887665444321
Q ss_pred HHHHHhhhcc-------CCchHHHHHHHHhhhhhh---hHHHHHHH------hhccCCCcchhH---HHHHHHHHHHHHH
Q 013378 324 INMFICSISW-------SAWVPYATTAFSVLVVFA---TPSFRSIV------SKQVGPNEQGKA---QGCISGISSFANI 384 (444)
Q Consensus 324 ~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~---~~~~~~~~------~~~~~~~~~g~~---~g~~~~~~~~g~~ 384 (444)
.+.+...+.+ .++... +.+.....+.+ .....++. .-....+.+... .+...........
T Consensus 111 gglvi~~l~~~~~~~~t~pv~t~-~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 111 GGLVITLLVHKDLKSATSPVFTV-CLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHhhheeecchhcccccHHHH-HHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 1222222222 122221 22222221111 11111111 111123333333 3666667777888
Q ss_pred HhHHHHHHHHHhh
Q 013378 385 VSPLIFSPLTALF 397 (444)
Q Consensus 385 ~~~~~~g~l~~~~ 397 (444)
+.|.+.|.+.+..
T Consensus 190 Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 190 LAPVITGLIITFV 202 (503)
T ss_pred hhhhhhcccceee
Confidence 9999999998765
No 322
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=35.05 E-value=4e+02 Score=25.22 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=27.0
Q ss_pred ChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhhHH
Q 013378 137 SERQRASAFGILLGVLSASFVCGTLAARFLSTTS 170 (444)
Q Consensus 137 ~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~ 170 (444)
++++.+....+.+...+.|.+.-|...+.-||-.
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i~ 35 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLWV 35 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 4567888999999999999999898876666543
No 323
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.45 E-value=1.2e+02 Score=22.23 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc
Q 013378 281 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 332 (444)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (444)
...|-.+...+-..++.+.+. ++..|+..+.+.=.+|..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W-~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLW-GWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHH-HhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 345777888888888887444 799999888777677777777766655443
No 324
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.40 E-value=2.4e+02 Score=22.42 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=26.4
Q ss_pred hHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHH
Q 013378 352 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 385 (444)
Q Consensus 352 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 385 (444)
....|.+++..-++++.|+..|+-..-.+++...
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4455667777788888999999998888876554
No 325
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=32.31 E-value=4.2e+02 Score=24.68 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=36.3
Q ss_pred HHHHHhhhhcccchhhhhhhhh--hccCChhhhhHHHHHH-HHHHHhhhhhHHHhHHhhhhH
Q 013378 111 YALRTLTAMVCEGSINCLALAY--ADNISERQRASAFGIL-LGVLSASFVCGTLAARFLSTT 169 (444)
Q Consensus 111 ~~~r~l~G~~~~g~~~~~~~~~--~~~~~~~~r~~~~~~~-~~~~~lg~~~g~~l~~~l~~~ 169 (444)
++.|-+... -..-..|+.... .|..|.+ |-..++.. ....+.|.++||.++..+||-
T Consensus 24 ~l~~~~~~~-d~~~~TPA~~~~DGvDYvP~~-~~vlfghhf~sIAGaGPI~GPi~aa~~Gwl 83 (376)
T PF02554_consen 24 FLEKKFGKL-DDSRPTPAHTMNDGVDYVPTN-KWVLFGHHFASIAGAGPIVGPILAAQFGWL 83 (376)
T ss_pred HHHheeccC-CCCCCCCeeECCCCCCCCCCc-hHHhhHHHHHHHhccccchHHHHHHHhcch
Confidence 344444334 334444555455 6777754 55666654 455678999999999999996
No 326
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=31.53 E-value=2.5e+02 Score=24.20 Aligned_cols=31 Identities=26% Similarity=0.241 Sum_probs=13.7
Q ss_pred hhhHHHHHHHHHHHhhhhhHHHhHHhhhhHH
Q 013378 140 QRASAFGILLGVLSASFVCGTLAARFLSTTS 170 (444)
Q Consensus 140 ~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~ 170 (444)
-|...+|..-.....-.++..+.+...+-+.
T Consensus 20 lr~~VlG~nDGlvt~falvaG~aga~~~~~~ 50 (234)
T cd02433 20 LRAAVFGANDGLVSNLALVMGVAGAGVSNQT 50 (234)
T ss_pred HHHHHHhccchHHHHHHHHHHHHhhcCCcch
Confidence 3555555554444433344334333333333
No 327
>PRK02237 hypothetical protein; Provisional
Probab=30.45 E-value=2e+02 Score=21.21 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhc
Q 013378 282 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 332 (444)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (444)
..|-.+...+-..++.+ +.-++..|+..+-+.=.+|..++.++..++.+.
T Consensus 57 ~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 35778888888888887 444799999887776667777777766555443
No 328
>PRK02237 hypothetical protein; Provisional
Probab=29.60 E-value=97 Score=22.71 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccCchHHHHHHHHHhHHHHHHHHhcc
Q 013378 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (444)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (444)
.|-+.++|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 47778888999999999999999998877766777777777766555543
No 329
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=29.07 E-value=94 Score=25.52 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhhccccccccCc
Q 013378 59 IIGLGTLVMMPVIGNLSDQYGR 80 (444)
Q Consensus 59 ~~~l~~~~~~~~~G~l~Dr~Gr 80 (444)
-|.+++.+.+.+.|++.||..+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 3456677777777778877764
No 330
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=28.31 E-value=4.9e+02 Score=24.23 Aligned_cols=83 Identities=12% Similarity=-0.022 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccCchHHHH----HHHHHh-HHHHHHHHhccCc-hhhHHHHHHHHhhhhcccch
Q 013378 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT----LPLTLS-IIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGS 124 (444)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~----~~~~~~-~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~ 124 (444)
.+.+.+.+.|..+..+++...-++.|.--.-+... .+++.- ....+-..|+.+. +.-+.+++.-++.|. -.|.
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~-LVG~ 121 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV-LVGA 121 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH-HHhc
Confidence 45577788888888888888888877533322222 222211 1111222344332 125788888888888 5577
Q ss_pred hhhhhhhh-hc
Q 013378 125 INCLALAY-AD 134 (444)
Q Consensus 125 ~~~~~~~~-~~ 134 (444)
..|..+.+ ..
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 77888877 54
No 331
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.70 E-value=6.7e+02 Score=25.99 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=28.4
Q ss_pred ccccccc----cCchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhh
Q 013378 71 IGNLSDQ----YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (444)
Q Consensus 71 ~G~l~Dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (444)
.+-++|. -||.+-++++.++++++++...+.... .|.+...-++.++
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~--p~lf~~~l~~~tf 93 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK--PWLFAVGLTVSTF 93 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 4556664 356677778888888777776665542 3444444444444
No 332
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=26.31 E-value=1.2e+02 Score=22.29 Aligned_cols=30 Identities=10% Similarity=-0.054 Sum_probs=21.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 013378 166 LSTTSAFQAATIVSMLAAAYMRVFLKDDVP 195 (444)
Q Consensus 166 l~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 195 (444)
.+|+.+|++...++++.+.+.+.+.||+.-
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 488999988777766766666667777653
No 333
>PRK11469 hypothetical protein; Provisional
Probab=25.52 E-value=3.9e+02 Score=22.10 Aligned_cols=23 Identities=26% Similarity=0.180 Sum_probs=14.0
Q ss_pred ccccccCchHHHHHHHHHhHHHH
Q 013378 73 NLSDQYGRKAMLTLPLTLSIIPL 95 (444)
Q Consensus 73 ~l~Dr~Grr~~l~~~~~~~~~~~ 95 (444)
++.+++|||.-++-+.++..++.
T Consensus 157 ~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 157 FIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677766666666665554
No 334
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.47 E-value=4.9e+02 Score=23.24 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCchhHHHHHHHHHHHHHHHhhhccCCchH
Q 013378 281 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 338 (444)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (444)
.++++=+.+..+.+++.+ .+ ++.||++|-..+.++....++.....-..+-+|..
T Consensus 99 leaSLGY~InPL~~VllG-~l--flkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwva 153 (293)
T COG2962 99 LEASLGYFINPLVNVLLG-RL--FLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVA 153 (293)
T ss_pred hHHHhHHHHHHHHHHHHH-HH--HHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 344444555666666654 32 56789988888777777766665555444445543
No 335
>COG1288 Predicted membrane protein [Function unknown]
Probab=25.06 E-value=6.2e+02 Score=24.28 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=18.9
Q ss_pred HHHHhhccCCCcchhHHHHHHHHHHHHHHHhHH
Q 013378 356 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 388 (444)
Q Consensus 356 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 388 (444)
.+=+.|.+.- .|..+.-.++....+...+.|.
T Consensus 407 mAPLaD~vgv-~RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 407 MAPLADLVGV-PRQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred hhhhHHhcCC-CHHHhhhhhhhcchhhheecCc
Confidence 3334566653 3555555567777777777764
No 336
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=24.43 E-value=4.3e+02 Score=22.27 Aligned_cols=12 Identities=25% Similarity=0.567 Sum_probs=6.3
Q ss_pred chhHHHHHHHhh
Q 013378 263 GMQASFLYFLKA 274 (444)
Q Consensus 263 ~~~~~~~~~~~~ 274 (444)
+....+|.++..
T Consensus 146 ~liPllp~~~~~ 157 (213)
T PF01988_consen 146 GLIPLLPYFFLP 157 (213)
T ss_pred HHHHHHHHHHhh
Confidence 445556655543
No 337
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=24.30 E-value=4.5e+02 Score=22.38 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=7.1
Q ss_pred hhcchhHHHHHHH
Q 013378 260 SEGGMQASFLYFL 272 (444)
Q Consensus 260 ~~~~~~~~~~~~~ 272 (444)
...+....+|.++
T Consensus 148 ~lg~liPllpy~~ 160 (218)
T cd02432 148 SVGALLPLLAILL 160 (218)
T ss_pred HHHHHHHHHHHHH
Confidence 3345566666554
No 338
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=23.67 E-value=8.3e+02 Score=25.30 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=29.8
Q ss_pred hhcccccccc----CchHHHHHHHHHhHHHHHHHHhccCchhhHHHHHHHHhhhh
Q 013378 69 PVIGNLSDQY----GRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (444)
Q Consensus 69 ~~~G~l~Dr~----Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (444)
.+++-++|.= ||.+-++++..+++++++...+.... .|.+...-++.++
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~--p~~~~~~l~~~tf 93 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK--PWLFPFLLTLLTF 93 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHH
Confidence 3445566643 56777888888888887777766552 3444444444444
No 339
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=23.04 E-value=2.2e+02 Score=18.39 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=15.0
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhccCCC
Q 013378 169 TSAFQAATIV---SMLAAAYMRVFLKDDV 194 (444)
Q Consensus 169 ~~~f~~~~~~---~~~~~~~~~~~~~e~~ 194 (444)
|..|.+...+ .++.-++.++.+|+.+
T Consensus 32 Rl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 32 RLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 6666555543 3344455667788765
No 340
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=21.42 E-value=7.1e+02 Score=23.69 Aligned_cols=35 Identities=6% Similarity=-0.144 Sum_probs=25.5
Q ss_pred ChhhhhHHHHHHHHHHHhhhhhHHHhHHhhhhHHH
Q 013378 137 SERQRASAFGILLGVLSASFVCGTLAARFLSTTSA 171 (444)
Q Consensus 137 ~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~ 171 (444)
.++.++..+.+.....+.|.+.-|...+..|+-..
T Consensus 8 ~~s~~~~vl~l~gT~IGAGvL~lP~a~~~~G~~~~ 42 (415)
T COG0814 8 TSSDLGGVLILAGTAIGAGVLFLPVAFGGGGFWPG 42 (415)
T ss_pred CcchHHHHHHHHccccccchhhhhHHhcCCcHHHH
Confidence 45678888888888888888888877666555443
No 341
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.61 E-value=1.7e+02 Score=23.07 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhhccccccccCchH
Q 013378 57 QAIIGLGTLVMMPVIGNLSDQYGRKA 82 (444)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (444)
+.-|.++..+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34567888888999999999988764
Done!