BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013379
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 211/460 (45%), Gaps = 60/460 (13%)
Query: 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIA 68
D+ S+V++F I T E A ++L L AI LF+ ESG + S E +
Sbjct: 4 DEASLVANFCAI-TNSTPEKAQEYLSVADGDLSTAITLFF---ESGGVTDVQSSYIEAPS 59
Query: 69 NPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDD-AMFYAGSG--------ARYPLHEPSS 119
P E E+RAP+ R+ L D A AG+ +P
Sbjct: 60 QTEPVE-----------EIRAPIAPTREVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQ 108
Query: 120 LIAFRNFDE---EMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAA 176
FD+ ++ P + S + S LA L+RPP+ ++ N S ++A+ A
Sbjct: 109 RRRMGIFDQSPSQIPFPSSNTEDSSEESDSSSRASRLAKLFRPPYDIISNLSLDEARIEA 168
Query: 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYK 236
S Q +W+LVNLQ++ F +LNRD W +E+V + I +F+F Q+ DD G + +Y
Sbjct: 169 SSQKRWILVNLQTSTSFECQVLNRDLWKDESVKEVIRAHFLFLQLLDDEEPGMEFKRFYP 228
Query: 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTT 296
+ S P + ++DP TG++++ W P + L F++G ++ + K P G+ +
Sbjct: 229 VRSTPHIAILDPRTGERVKEWSKSFTPADFVIALNDFLEGCTLDETS--GRKNPLGAKS- 285
Query: 297 PQQKNKDKPDIENEELLQALAASM---ETIKDASGVSSS---------DTDVASTDKDEA 344
QK + E+E++ +A+AAS+ + ++ G SSS D V D E
Sbjct: 286 --QKPVEAMS-EDEQMHKAIAASLGNGNSTTESQGESSSQQAESHGVADDTVHKIDSAEC 342
Query: 345 SATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSE 404
A E P + R+ +R+P+G R R F TDP+ +++Y EG++
Sbjct: 343 DAEEPSPGPN-----------VTRIQIRMPNGARFIRRFSLTDPVSKVYAYVKGVAEGAD 391
Query: 405 MKPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMISVTWE 444
+PF LT SLD T +++G+ N + ++
Sbjct: 392 KQPFSLTFQRKSLWTSLDS----TIKEAGIQNTALQFEFQ 427
>sp|Q5REY7|UBXN7_PONAB UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2
Length = 489
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 124/247 (50%), Gaps = 18/247 (7%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L + + R P S FR+F E
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTET 118
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
R E E D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 119 IR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 175
Query: 191 KEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPIT 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP T
Sbjct: 176 QDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRT 235
Query: 251 GQKMRSW 257
GQK+ W
Sbjct: 236 GQKLVEW 242
>sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2
Length = 489
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 124/247 (50%), Gaps = 18/247 (7%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L + + R P S FR+F E
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTET 118
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
R E E D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 119 IR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 175
Query: 191 KEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPIT 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP T
Sbjct: 176 QDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRT 235
Query: 251 GQKMRSW 257
GQK+ W
Sbjct: 236 GQKLVEW 242
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2
Length = 467
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 40/247 (16%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTAI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L EP L R ++E+
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILV----------------EPEPLFGVRQ-EQEL 103
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
+ G D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 104 RNGGA----------IDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 153
Query: 191 KEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPIT 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP T
Sbjct: 154 QDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRT 213
Query: 251 GQKMRSW 257
GQK+ W
Sbjct: 214 GQKLVEW 220
>sp|Q55BU7|UBXN7_DICDI UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum
GN=ubxd7 PE=4 SV=1
Length = 503
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 18/321 (5%)
Query: 13 MVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGP 72
++S+FL I + A L+ +W ++ ++ F+ N+ + + S
Sbjct: 6 ILSNFLSITGCDDSSLATTILENNNWDVERSVDFFFTMNDPSNVKPTTSSKKTSSPPTAS 65
Query: 73 EENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEMKR 132
++ + DE R P+P D L D +Y + Y + + AFR+F++E
Sbjct: 66 SSSASSEFDYNEDEFRDPIPQKMDKLVD--HYYQPTQRSYQ-KQTNVFEAFRDFEKER-- 120
Query: 133 PGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKE 192
G+ + + A + +L+ L++PP ++ G+F++ K A + ++LVN+Q +E
Sbjct: 121 -GINQDK------ATEKQKSLSELFKPPLDILTFGTFDEIKKMAEQKKYFVLVNIQDVQE 173
Query: 193 FSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQ 252
F LNRDTW+N+ + + I NF+FWQV EGK Y + P + ++DP TGQ
Sbjct: 174 FDCQKLNRDTWSNKDLKELIGENFVFWQVNSANPEGKWFTQIYPVFKFPYIAIIDPRTGQ 233
Query: 253 KMRSWCGMVQPESLLEDLVPFMDGGPRE-QHAKVSHKRPRGSSTTPQQKNKDKPDIENEE 311
K++ G + E + + LV F+ Q G+S K + K + E+EE
Sbjct: 234 KLQDMTGFIDAEEMAQYLVTFLSTNSFSGQIDPPPSSSSSGAS-----KKQKKYNTEDEE 288
Query: 312 LLQALAASMETIKDASGVSSS 332
L A+A S++ ++ + S S
Sbjct: 289 LELAIALSLKQEQERNSKSGS 309
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 197/497 (39%), Gaps = 87/497 (17%)
Query: 14 VSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP-GP 72
V F+ I A A QF++ L+ AI LF+ N A+ S++ +P + P P
Sbjct: 6 VDEFMAITGADDAAIATQFIEMADGNLNTAISLFF-ENGGAALLSSNNTPTPSNSTPMAP 64
Query: 73 EENSVTAGQEIGDE---------------VRAPLPVVRDTLYDDAMF---YAGSGARY-P 113
A ++ + VR P + L + + F Y G G R+ P
Sbjct: 65 TSVDSDADAQLAERLQREAYQQQQPDQDYVRPPDEARHEVLTETSGFPISYGGIGGRFEP 124
Query: 114 LHE---------PSSLIAFRNFD--------------------------EEMKRPGVWES 138
LH P S+ R D E ++ P +
Sbjct: 125 LHRVNDMFDEGRPESIFNQRLDDTNTNTYINDNSSDSLDSEEENDDDEYEYVEEPVIELD 184
Query: 139 EQGAAS---------TADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQS 189
E G S LA L+RPPF +M + AK A + KW+++N+Q
Sbjct: 185 EDGNIKEYTKLVRKPKTISKEQKLALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQD 244
Query: 190 TKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKL---DSIPVVLVV 246
+ F LNRD W++ V I NF+F Q ++ + +Y L D +P + ++
Sbjct: 245 SGIFQCQALNRDLWSSRPVKTIIKENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAIL 304
Query: 247 DPITGQKMRSWCGMVQ-PESLLEDLVPFMDG---GPREQHAKVSHKRPRGSSTTPQQKNK 302
DPITG++++ W +V PE + ++ F+ P+ + V+ P+ TT ++ +
Sbjct: 305 DPITGERVKQWNRVVPIPEQFISEINEFLASFSLDPKVPNPTVNEPLPKVDPTTLTEEQQ 364
Query: 303 DKPDIENEELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVD 362
+ I+ + ++ E + S+ + + D S E +P P +P
Sbjct: 365 MELAIKESLNNNSSKSNQEEVP-----STGEEQKRVQEPDPFSTIEARVHPEPPNKP--- 416
Query: 363 RSLLCRVGVRLPDGRRMQRNF-LRTDPIQLLWSYCYSQLEGSEMKPFRLT-HAIPGATKS 420
+ R+ +R DG R+ R F D ++ ++ ++++G F L H
Sbjct: 417 -GITTRIQIRTGDGSRLVRRFNALEDTVRTIYEVIKTEMDGFADSRFTLNDHQREDLIDK 475
Query: 421 LDYDSKLTFEDSGLANA 437
L+ +T D+GL N+
Sbjct: 476 LN----MTIADAGLKNS 488
>sp|Q6GQ69|FAF2B_XENLA FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1
Length = 445
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 111/270 (41%), Gaps = 31/270 (11%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A + A + ++LLV L S R+T V+ I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTSEVTHFINSRMLFWACS 212
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 279
+ EG +V + P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 SNKPEGFRVSQALHESTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFIIEAN-- 269
Query: 280 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 339
Q VS + R + +++ + ++ +A S+ ++ D
Sbjct: 270 -QTYLVSERLER--------EERNQTQVLRQQQDEAYLVSLRADQEKERKKKEKQDQKRR 320
Query: 340 DKDEASATE--------------KPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLR 385
+++EA + + LP EP D ++ ++P+G R++R FL
Sbjct: 321 EEEEAQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLF 380
Query: 386 TDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 415
T + ++ + +S E E F++ + P
Sbjct: 381 TQSLSVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q28BP9|FAF2_XENTR FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1
Length = 445
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 103/255 (40%), Gaps = 21/255 (8%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A + A + ++LLV L S R+T V+ +++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCIPEVTNFLNSRMLFWACS 212
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 279
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 TNKPEGFRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFIVEAN-- 269
Query: 280 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 339
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKKEKQEQKRREEEE 324
Query: 340 DKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 389
+ + E+ + LP EP D ++ ++P+G R++R FL T +
Sbjct: 325 AQLKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSL 384
Query: 390 QLLWSYCYSQLEGSE 404
++ + +S E E
Sbjct: 385 SVIHDFLFSLKETPE 399
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 37/299 (12%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A + A + ++LLV L S R+T V I+T +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACS 212
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 279
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN-- 269
Query: 280 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 339
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRRKEEE 324
Query: 340 DKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLRT 386
+ + A E+ + E+ +R L C ++ +LP+ R++R F +
Sbjct: 325 VQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHFS 381
Query: 387 DPIQLLWSYCYSQLEGSEM------KPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 439
+ ++ + +S E E P R+ IP S ++ + T +++GL++ +
Sbjct: 382 QSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIP----SEEWPNPPTLQEAGLSHTEV 436
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 159 PPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIF 218
P F+L G++ +A + A + ++LLV L S R+T V I+T +F
Sbjct: 152 PVFYL---GTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLF 208
Query: 219 WQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMD 275
W + EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 209 WACSTNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMD 267
Query: 276 GG 277
Sbjct: 268 AN 269
>sp|Q6AZH6|FAF2A_XENLA FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1
Length = 445
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 23/266 (8%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A + A + ++LLV L S R+T V+ I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTPEVTHFINSRMLFWACS 212
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGPR 279
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L ++
Sbjct: 213 TNKPEGFRVSQALRENTYPFLGMIM-LKDRRMTVVGRLEGLMQPQDLINQLTFIIEAN-- 269
Query: 280 EQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAST 339
Q VS + R Q + ++E L +L A E +
Sbjct: 270 -QTYLVSERLEREERNETQVLRQQ----QDEAYLVSLRADQEKERKKKEKQEQKRREEEE 324
Query: 340 DKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPI 389
+ + E+ + LP EP D ++ ++P+G R++R FL T +
Sbjct: 325 AQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQSL 384
Query: 390 QLLWSYCYSQLEGSEMKPFRLTHAIP 415
++ + +S E E F++ + P
Sbjct: 385 SVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A + A + ++LLV L S R+ V I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 212
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGG 277
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN 269
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY 222
+ + G++ +A A + ++LLV L S R+ V I++ +FW
Sbjct: 54 VFYQGTYSQALSDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 113
Query: 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGG 277
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 114 TNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN 170
>sp|Q9QZ49|UBXN8_MOUSE UBX domain-containing protein 8 OS=Mus musculus GN=Ubxn8 PE=1 SV=1
Length = 277
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 308 ENEELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSLLC 367
E+ E + AS ETI + + ++ A + P LPEEP +
Sbjct: 139 EDSEFENSSQASFETINGEAARRQNLPKFSTEISPAARPLLRKEVPDLPEEPSETAEEVV 198
Query: 368 RVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKL 427
V +R P+GR ++R F ++ Q+L + G +RL+ + P ++L+ +
Sbjct: 199 TVALRCPNGRVLRRRFFKSWNSQVLLDWMMKV--GYHKSLYRLSTSFP--RRALEVEGGS 254
Query: 428 TFEDSGL 434
+ ED G+
Sbjct: 255 SLEDIGI 261
>sp|C5CAR1|SECA_MICLC Protein translocase subunit SecA OS=Micrococcus luteus (strain ATCC
4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 /
NCTC 2665 / VKM Ac-2230) GN=secA PE=3 SV=1
Length = 911
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 3 SVLSANDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDE 42
S+L D Q V F+E AVG + A + QAT W LD+
Sbjct: 662 SILEGEDLQDRVRRFVEDAVGNIVDAATEEGQATDWDLDQ 701
>sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protein LSm4 OS=Fagus
sylvatica GN=LSM4 PE=2 SV=1
Length = 148
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 183 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNF---IFWQVYDDTSEGKKV 231
+LV L+S + ++ H++N DTW N + + I T+ FW++ D G +
Sbjct: 15 MLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCYIRGNTI 66
>sp|Q9JL58|KCNK9_CAVPO Potassium channel subfamily K member 9 OS=Cavia porcellus GN=KCNK9
PE=1 SV=1
Length = 365
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 211 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 259
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 260 MVQPESLLEDLV 271
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q3A7A9|CBID_PELCD Putative cobalt-precorrin-6A synthase [deacetylating] OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cbiD PE=3
SV=1
Length = 350
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 31/130 (23%)
Query: 271 VPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVS 330
+P +DG +H+ P G+ + D PD+ N L+ A V
Sbjct: 36 IPLLDGTRESLPLAYAHRLPDGAEAAVYKNAGDDPDVTNGALIIAR------------VV 83
Query: 331 SSDTDVASTDKDEASATEKPAYPILPEEPKV----------------DRSLLCRVGVRLP 374
+SD + + KP + P EP + DR L RV + +P
Sbjct: 84 ASDKPLEFRAGEGVGIITKPGLALPPGEPAINPGPRLMIESAVREVTDRGL--RVTIAIP 141
Query: 375 DGRRM-QRNF 383
DG+++ +R F
Sbjct: 142 DGKQLAERTF 151
>sp|Q9ES08|KCNK9_RAT Potassium channel subfamily K member 9 OS=Rattus norvegicus
GN=Kcnk9 PE=1 SV=2
Length = 396
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 211 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 259
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 260 MVQPESLLEDLV 271
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|P54731|FAF1_MOUSE FAS-associated factor 1 OS=Mus musculus GN=Faf1 PE=1 SV=2
Length = 649
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 109/276 (39%), Gaps = 29/276 (10%)
Query: 163 LMFNGSFEKAKDAA---SVQDKWLL-VNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIF 218
+ F GS E A A +D+ LL + L + +++ E++ +S NFI
Sbjct: 350 VFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFIT 409
Query: 219 W--QVYDDTSEGK--KVCTYY------------KLDSIPVVLVV--DPITGQKMRSWCGM 260
W + DT+ + +C + K D P+ L++ + + + G
Sbjct: 410 WAWDLTKDTNRARFLTMCNRHFGSVIAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGN 469
Query: 261 VQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASM 320
+ L+ L+ M+ +Q + + R + +++ + + L+A A
Sbjct: 470 TTVDELMMRLMAAMEIFSAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAKR 525
Query: 321 ETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSL-LCRVGVRLPDGRRM 379
E + + ++E A LP EPK + + + ++ +R P G +
Sbjct: 526 EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFL 585
Query: 380 QRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 415
+R FL ++ +Q+++ + S+ G F+L P
Sbjct: 586 ERRFLASNKLQIVFDFVASK--GFPWDEFKLLSTFP 619
>sp|Q3LS21|KCNK9_MOUSE Potassium channel subfamily K member 9 OS=Mus musculus GN=Kcnk9
PE=2 SV=1
Length = 402
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 211 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 259
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 260 MVQPESLLEDLV 271
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 181 KWLLVNLQSTK--EFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 238
WLL+ + T +F+SH R +AN AV T+ TN + + + D ++ Y +D
Sbjct: 57 HWLLLVIWVTSLWKFTSHY--RQLYANSAVFATLCTNILLFGISDILAQSIACFYSYHVD 114
Query: 239 SIPVVL 244
IP +L
Sbjct: 115 PIPQIL 120
>sp|O74498|UCP10_SCHPO UBX domain-containing protein 10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1
Length = 427
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 355 LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYC-YSQLEGSEMKPF-RLTH 412
LP EP + R+ +R PDG R R F + D ++ +++Y Y E E + F R T
Sbjct: 317 LPPEPSSEDEP-ARLSIRFPDGSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEEFGRATS 375
Query: 413 AIPGATKSLDYDSKLTFE-DSGLANAMI 439
+ T DY F+ S L A++
Sbjct: 376 SSNPVTPPSDYKHDFHFQLYSSLPRALL 403
>sp|O77713|ADA2B_DUGDU Alpha-2B adrenergic receptor (Fragment) OS=Dugong dugon GN=ADRA2B
PE=3 SV=2
Length = 390
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 283 AKVSHKRPRGSSTTPQQKNKDKP---DIENEEL--LQALAASMETIKDASGVSSSDTDV- 336
AK SH+R G+ P++ +P D L L LA+S+ +A+G S +
Sbjct: 186 AKRSHRRGPGAKGGPRKGESKQPHSLDSGPSALANLPTLASSLAVAGEANGHSMPPGEKE 245
Query: 337 ASTDKDEASATEKPAYPILPEEPKVDRSLLC 367
T +D + T P++P+LP + + +C
Sbjct: 246 RETSEDPGTPTLPPSWPVLPNSGQGQKGGVC 276
>sp|Q9UNN5|FAF1_HUMAN FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2
Length = 650
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 107/271 (39%), Gaps = 29/271 (10%)
Query: 153 LASLYRPPFHLMFNGSFEKAKDAA---SVQDKWLL-VNLQSTKEFSSHMLNRDTWANEAV 208
+S Y + F GS E A A +D+ LL + L + +++ E++
Sbjct: 341 FSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESI 400
Query: 209 SQTISTNFIFWQVYDDTSEGKK-----VCTYY------------KLDSIPVVLVV--DPI 249
+S NFI W +D T + + +C + K D P+ L++
Sbjct: 401 VSYLSQNFITW-AWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRS 459
Query: 250 TGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIEN 309
+ + + G + L+ L+ M+ +Q + + R + +++ + +
Sbjct: 460 SNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLS- 518
Query: 310 EELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSL-LCR 368
L+A A E + + ++E A LP EPK + + + +
Sbjct: 519 ---LEADRAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSK 575
Query: 369 VGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQ 399
+ +R P G ++R FL ++ +Q+++ + S+
Sbjct: 576 LRIRTPSGEFLERRFLASNKLQIVFDFVASK 606
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,754,530
Number of Sequences: 539616
Number of extensions: 7119521
Number of successful extensions: 15037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 14975
Number of HSP's gapped (non-prelim): 81
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)