Query 013384
Match_columns 444
No_of_seqs 609 out of 3537
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 09:34:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h8v_A Ubiquitin-like modifier 100.0 5.2E-49 1.8E-53 382.5 17.0 217 72-291 14-274 (292)
2 1zud_1 Adenylyltransferase THI 100.0 3.1E-48 1.1E-52 371.9 21.1 223 66-292 1-247 (251)
3 1jw9_B Molybdopterin biosynthe 100.0 3.2E-47 1.1E-51 364.5 20.7 223 65-290 3-249 (249)
4 3h5n_A MCCB protein; ubiquitin 100.0 2.3E-45 8E-50 368.1 19.6 224 66-291 87-352 (353)
5 3rui_A Ubiquitin-like modifier 100.0 7.5E-41 2.6E-45 330.1 17.2 205 83-291 24-285 (340)
6 4gsl_A Ubiquitin-like modifier 100.0 2.6E-39 9E-44 338.2 17.7 220 66-291 294-577 (615)
7 1tt5_B Ubiquitin-activating en 100.0 6.6E-39 2.3E-43 328.0 17.3 206 84-292 30-342 (434)
8 3vh1_A Ubiquitin-like modifier 100.0 1.7E-38 5.9E-43 332.1 17.3 226 65-291 294-578 (598)
9 2nvu_B Maltose binding protein 100.0 3.5E-36 1.2E-40 332.6 20.7 207 83-292 400-713 (805)
10 1y8q_A Ubiquitin-like 1 activa 100.0 4.7E-36 1.6E-40 299.8 19.6 208 65-279 10-344 (346)
11 1tt5_A APPBP1, amyloid protein 100.0 4.4E-35 1.5E-39 307.1 7.2 184 69-254 10-232 (531)
12 1y8q_B Anthracycline-, ubiquit 100.0 8.9E-31 3E-35 276.9 20.0 175 77-257 3-201 (640)
13 3cmm_A Ubiquitin-activating en 100.0 3.4E-30 1.2E-34 286.2 10.9 154 71-228 405-592 (1015)
14 3cmm_A Ubiquitin-activating en 99.9 1.7E-27 5.8E-32 264.6 13.3 139 71-218 7-169 (1015)
15 3iwh_A Rhodanese-like domain p 99.9 5.1E-24 1.8E-28 175.8 7.6 99 326-440 2-100 (103)
16 3i2v_A Adenylyltransferase and 99.9 2E-23 6.7E-28 178.2 9.6 117 326-444 1-127 (127)
17 3foj_A Uncharacterized protein 99.9 3.6E-23 1.2E-27 169.7 8.3 98 326-439 2-99 (100)
18 3eme_A Rhodanese-like domain p 99.9 8.3E-23 2.8E-27 168.4 8.2 99 326-440 2-100 (103)
19 3gk5_A Uncharacterized rhodane 99.9 2.2E-22 7.6E-27 167.4 8.1 99 325-442 3-101 (108)
20 1gmx_A GLPE protein; transfera 99.9 5E-22 1.7E-26 165.1 7.0 99 324-439 3-101 (108)
21 3d1p_A Putative thiosulfate su 99.8 2E-21 6.7E-26 168.9 9.2 114 323-442 20-138 (139)
22 3flh_A Uncharacterized protein 99.8 1.6E-21 5.5E-26 166.3 7.2 102 326-443 15-120 (124)
23 3hix_A ALR3790 protein; rhodan 99.8 1E-21 3.5E-26 162.8 5.3 98 331-443 1-100 (106)
24 1wv9_A Rhodanese homolog TT165 99.8 3E-21 1E-25 156.4 6.3 93 326-437 2-94 (94)
25 1qxn_A SUD, sulfide dehydrogen 99.8 4.1E-21 1.4E-25 166.7 6.9 103 324-439 21-126 (137)
26 2hhg_A Hypothetical protein RP 99.8 9.6E-21 3.3E-25 164.4 9.0 111 323-440 19-131 (139)
27 3ilm_A ALR3790 protein; rhodan 99.8 9.3E-21 3.2E-25 165.3 7.3 98 328-439 2-100 (141)
28 1tq1_A AT5G66040, senescence-a 99.8 1.2E-20 4E-25 162.0 5.7 108 323-440 15-127 (129)
29 2k0z_A Uncharacterized protein 99.8 1.8E-20 6.2E-25 156.3 4.6 97 325-440 4-100 (110)
30 3nhv_A BH2092 protein; alpha-b 99.8 5.3E-20 1.8E-24 161.0 7.7 99 326-440 16-118 (144)
31 3g5j_A Putative ATP/GTP bindin 99.8 2.9E-19 9.9E-24 153.5 7.4 100 325-437 4-131 (134)
32 2fsx_A RV0390, COG0607: rhodan 99.8 2.3E-19 7.9E-24 157.6 6.2 109 325-439 4-136 (148)
33 2jtq_A Phage shock protein E; 99.8 1.6E-19 5.6E-24 143.2 4.7 80 343-436 2-81 (85)
34 2j6p_A SB(V)-AS(V) reductase; 99.8 7.3E-19 2.5E-23 155.2 8.9 107 324-440 3-120 (152)
35 1t3k_A Arath CDC25, dual-speci 99.8 2.5E-19 8.5E-24 158.2 3.6 106 323-440 25-139 (152)
36 1vee_A Proline-rich protein fa 99.8 9.5E-19 3.3E-23 151.1 7.1 107 325-440 4-122 (134)
37 4f67_A UPF0176 protein LPG2838 99.7 1.4E-18 4.7E-23 166.4 8.9 106 325-440 121-226 (265)
38 3op3_A M-phase inducer phospha 99.7 1.6E-18 5.5E-23 161.4 5.9 119 303-436 39-176 (216)
39 3f4a_A Uncharacterized protein 99.7 3.4E-18 1.2E-22 153.5 7.9 112 323-439 28-155 (169)
40 3olh_A MST, 3-mercaptopyruvate 99.7 4E-18 1.4E-22 167.2 8.5 114 323-443 172-302 (302)
41 1c25_A CDC25A; hydrolase, cell 99.7 2.4E-18 8.3E-23 153.0 5.0 106 323-439 20-144 (161)
42 2a2k_A M-phase inducer phospha 99.7 8.8E-18 3E-22 151.5 7.4 107 323-439 21-146 (175)
43 1e0c_A Rhodanese, sulfurtransf 99.7 3.7E-17 1.3E-21 157.6 11.6 108 325-439 146-268 (271)
44 1qb0_A Protein (M-phase induce 99.7 1.5E-17 5.1E-22 154.7 8.4 107 323-439 41-166 (211)
45 1e0c_A Rhodanese, sulfurtransf 99.7 3E-17 1E-21 158.2 9.2 107 326-439 9-126 (271)
46 2vsw_A Dual specificity protei 99.7 6.1E-18 2.1E-22 149.1 3.7 110 326-436 4-127 (153)
47 1urh_A 3-mercaptopyruvate sulf 99.7 3.1E-17 1.1E-21 158.9 8.2 110 323-439 149-275 (280)
48 1urh_A 3-mercaptopyruvate sulf 99.7 4.7E-17 1.6E-21 157.6 8.8 107 326-439 4-131 (280)
49 3hzu_A Thiosulfate sulfurtrans 99.7 9E-17 3.1E-21 158.7 10.0 109 325-440 39-157 (318)
50 3tg1_B Dual specificity protei 99.7 4.9E-17 1.7E-21 144.3 7.2 114 322-436 7-142 (158)
51 1rhs_A Sulfur-substituted rhod 99.7 6.2E-17 2.1E-21 158.2 8.5 105 324-435 158-280 (296)
52 1yt8_A Thiosulfate sulfurtrans 99.7 9E-17 3.1E-21 169.7 9.5 104 324-440 5-108 (539)
53 2ouc_A Dual specificity protei 99.7 3.7E-17 1.3E-21 141.5 5.1 111 327-439 2-135 (142)
54 1rhs_A Sulfur-substituted rhod 99.6 3E-16 1E-20 153.3 10.3 109 325-439 7-139 (296)
55 1uar_A Rhodanese; sulfurtransf 99.6 1.1E-16 3.7E-21 155.4 5.9 107 326-439 8-124 (285)
56 1uar_A Rhodanese; sulfurtransf 99.6 5E-16 1.7E-20 150.7 9.8 108 325-439 145-279 (285)
57 3aay_A Putative thiosulfate su 99.6 2.4E-16 8.3E-21 152.3 7.5 107 326-439 6-122 (277)
58 3tp9_A Beta-lactamase and rhod 99.6 2.8E-16 9.5E-21 163.4 7.1 101 323-439 371-471 (474)
59 1hzm_A Dual specificity protei 99.6 1.2E-16 4.1E-21 140.8 3.6 103 325-436 15-142 (154)
60 3aay_A Putative thiosulfate su 99.6 5.6E-16 1.9E-20 149.7 8.4 105 326-439 144-272 (277)
61 2eg4_A Probable thiosulfate su 99.6 6.1E-16 2.1E-20 145.5 8.1 98 325-439 120-227 (230)
62 2gwf_A Ubiquitin carboxyl-term 99.6 4.6E-16 1.6E-20 137.9 6.0 115 322-436 16-146 (157)
63 3olh_A MST, 3-mercaptopyruvate 99.6 1.3E-15 4.3E-20 149.4 9.5 108 326-439 22-154 (302)
64 3hzu_A Thiosulfate sulfurtrans 99.6 8.4E-16 2.9E-20 151.7 7.6 105 324-439 177-305 (318)
65 3ics_A Coenzyme A-disulfide re 99.6 7.2E-16 2.4E-20 164.4 7.6 99 322-438 485-583 (588)
66 1whb_A KIAA0055; deubiqutinati 99.6 5.3E-16 1.8E-20 137.5 5.0 116 321-436 10-141 (157)
67 3ntd_A FAD-dependent pyridine 99.6 9.9E-16 3.4E-20 162.3 7.0 96 323-437 470-565 (565)
68 1okg_A Possible 3-mercaptopyru 99.6 1.1E-15 3.9E-20 153.9 7.0 105 325-439 13-140 (373)
69 1yt8_A Thiosulfate sulfurtrans 99.6 2.2E-15 7.4E-20 159.1 8.9 103 322-440 373-475 (539)
70 2wlr_A Putative thiosulfate su 99.6 5.5E-15 1.9E-19 151.5 9.8 108 326-439 124-247 (423)
71 2wlr_A Putative thiosulfate su 99.5 3.9E-15 1.3E-19 152.6 7.1 105 324-435 270-398 (423)
72 1okg_A Possible 3-mercaptopyru 99.5 2E-14 6.9E-19 144.7 5.4 91 341-435 173-286 (373)
73 3r2u_A Metallo-beta-lactamase 99.5 3.8E-15 1.3E-19 154.5 0.0 87 333-435 379-465 (466)
74 2eg4_A Probable thiosulfate su 99.5 3.3E-14 1.1E-18 133.7 5.5 85 339-435 3-98 (230)
75 3utn_X Thiosulfate sulfurtrans 99.5 1.5E-13 5.1E-18 135.6 9.8 116 326-441 184-321 (327)
76 3tp9_A Beta-lactamase and rhod 99.3 8.1E-13 2.8E-17 137.2 5.7 100 322-439 269-369 (474)
77 3utn_X Thiosulfate sulfurtrans 99.2 8.1E-12 2.8E-16 123.1 6.3 110 323-439 25-157 (327)
78 3r2u_A Metallo-beta-lactamase 98.8 1.4E-09 4.8E-14 112.6 5.2 79 341-434 295-375 (466)
79 3ic5_A Putative saccharopine d 97.8 3.6E-05 1.2E-09 62.8 7.1 95 93-192 5-100 (118)
80 3dfz_A SIRC, precorrin-2 dehyd 97.8 2.4E-05 8E-10 72.6 5.9 92 90-189 28-119 (223)
81 2g1u_A Hypothetical protein TM 97.8 0.00019 6.5E-09 62.2 11.0 99 89-191 15-116 (155)
82 3jyo_A Quinate/shikimate dehyd 97.6 4.2E-05 1.4E-09 73.7 4.2 76 90-169 124-203 (283)
83 2hmt_A YUAA protein; RCK, KTN, 97.5 0.00041 1.4E-08 58.4 9.7 95 90-189 3-100 (144)
84 3abi_A Putative uncharacterize 97.4 0.00015 5E-09 72.3 6.6 93 92-192 15-108 (365)
85 3llv_A Exopolyphosphatase-rela 97.4 0.00059 2E-08 57.8 8.6 96 91-191 4-101 (141)
86 1kyq_A Met8P, siroheme biosynt 97.3 0.00038 1.3E-08 66.5 7.0 95 90-189 10-138 (274)
87 3tnl_A Shikimate dehydrogenase 97.3 0.00014 4.8E-09 71.0 3.7 78 90-169 151-235 (315)
88 2f46_A Hypothetical protein; s 97.2 0.00077 2.6E-08 58.6 7.8 82 328-420 30-128 (156)
89 3e8x_A Putative NAD-dependent 97.2 0.0012 4.3E-08 60.7 9.4 101 87-193 15-131 (236)
90 1pjq_A CYSG, siroheme synthase 97.2 0.00082 2.8E-08 69.0 8.4 92 90-188 9-100 (457)
91 1lss_A TRK system potassium up 97.1 0.0011 3.9E-08 55.4 7.7 89 94-186 5-95 (140)
92 2ph5_A Homospermidine synthase 97.1 0.0012 4.1E-08 67.5 8.9 101 93-198 13-120 (480)
93 1id1_A Putative potassium chan 97.0 0.002 6.9E-08 55.4 8.4 90 92-184 2-95 (153)
94 2z2v_A Hypothetical protein PH 96.9 0.00091 3.1E-08 66.6 6.0 94 91-192 14-108 (365)
95 3t4e_A Quinate/shikimate dehyd 96.9 0.00036 1.2E-08 67.9 3.0 79 90-170 145-230 (312)
96 3c85_A Putative glutathione-re 96.8 0.0036 1.2E-07 55.4 8.7 91 90-185 36-130 (183)
97 4ina_A Saccharopine dehydrogen 96.8 0.0013 4.6E-08 66.3 6.3 97 94-191 2-106 (405)
98 3l4b_C TRKA K+ channel protien 96.8 0.0028 9.5E-08 58.0 7.7 92 95-190 2-96 (218)
99 3pp8_A Glyoxylate/hydroxypyruv 96.8 0.00069 2.4E-08 66.1 3.7 97 83-192 129-229 (315)
100 3pwz_A Shikimate dehydrogenase 96.7 0.0013 4.3E-08 62.9 5.1 141 90-258 117-259 (272)
101 3u62_A Shikimate dehydrogenase 96.7 0.0011 3.7E-08 62.7 4.6 69 91-169 107-175 (253)
102 3tum_A Shikimate dehydrogenase 96.7 0.00097 3.3E-08 63.5 4.2 71 90-169 122-196 (269)
103 2egg_A AROE, shikimate 5-dehyd 96.7 0.00083 2.8E-08 64.9 3.6 77 90-171 138-215 (297)
104 3evt_A Phosphoglycerate dehydr 96.7 0.0011 3.9E-08 64.8 4.3 105 75-192 118-227 (324)
105 4dgs_A Dehydrogenase; structur 96.6 0.0065 2.2E-07 59.7 9.5 89 89-193 167-259 (340)
106 3o8q_A Shikimate 5-dehydrogena 96.6 0.0015 5.3E-08 62.6 4.8 75 90-171 123-198 (281)
107 3fwz_A Inner membrane protein 96.6 0.0046 1.6E-07 52.4 7.3 87 93-184 7-95 (140)
108 3don_A Shikimate dehydrogenase 96.6 0.0025 8.7E-08 60.9 6.1 72 90-170 114-185 (277)
109 3gvx_A Glycerate dehydrogenase 96.5 0.001 3.5E-08 64.1 3.0 88 89-192 118-209 (290)
110 2hk9_A Shikimate dehydrogenase 96.5 0.0025 8.5E-08 60.8 5.3 72 90-171 126-197 (275)
111 2axq_A Saccharopine dehydrogen 96.4 0.0039 1.3E-07 64.1 6.5 98 90-191 20-118 (467)
112 1hdo_A Biliverdin IX beta redu 96.4 0.019 6.6E-07 50.9 10.5 98 93-195 3-113 (206)
113 4egb_A DTDP-glucose 4,6-dehydr 96.4 0.0084 2.9E-07 58.3 8.6 108 91-198 22-154 (346)
114 3gpi_A NAD-dependent epimerase 96.3 0.01 3.6E-07 56.0 8.6 98 92-198 2-114 (286)
115 3dhn_A NAD-dependent epimerase 96.3 0.017 5.8E-07 52.4 9.6 97 94-196 5-115 (227)
116 3oj0_A Glutr, glutamyl-tRNA re 96.3 0.00082 2.8E-08 57.3 0.6 71 92-171 20-91 (144)
117 3slg_A PBGP3 protein; structur 96.2 0.0097 3.3E-07 58.5 8.2 108 87-198 18-146 (372)
118 3fbt_A Chorismate mutase and s 96.2 0.0051 1.7E-07 58.9 5.9 68 91-169 120-187 (282)
119 2gn4_A FLAA1 protein, UDP-GLCN 96.2 0.012 3.9E-07 57.8 8.5 79 91-169 19-100 (344)
120 3dqp_A Oxidoreductase YLBE; al 96.2 0.027 9.1E-07 51.0 10.4 93 95-194 2-107 (219)
121 2dvm_A Malic enzyme, 439AA lon 96.2 0.0022 7.6E-08 65.1 3.3 79 90-170 183-273 (439)
122 1p9l_A Dihydrodipicolinate red 96.2 0.01 3.5E-07 55.6 7.6 73 95-193 2-77 (245)
123 2raf_A Putative dinucleotide-b 96.2 0.0099 3.4E-07 54.1 7.3 73 90-191 16-89 (209)
124 3m2p_A UDP-N-acetylglucosamine 96.2 0.016 5.3E-07 55.5 9.1 98 93-198 2-114 (311)
125 1vl6_A Malate oxidoreductase; 96.1 0.0093 3.2E-07 59.3 7.4 94 90-191 189-292 (388)
126 3dtt_A NADP oxidoreductase; st 96.1 0.01 3.5E-07 55.3 7.3 97 89-192 15-124 (245)
127 1ff9_A Saccharopine reductase; 96.1 0.015 5E-07 59.5 9.0 76 92-170 2-78 (450)
128 1gpj_A Glutamyl-tRNA reductase 96.0 0.0042 1.4E-07 62.6 4.3 73 91-171 165-238 (404)
129 3ruf_A WBGU; rossmann fold, UD 96.0 0.021 7.3E-07 55.5 9.3 109 89-198 21-156 (351)
130 4id9_A Short-chain dehydrogena 96.0 0.019 6.6E-07 55.7 8.9 102 86-198 12-131 (347)
131 2bka_A CC3, TAT-interacting pr 96.0 0.049 1.7E-06 49.8 11.2 76 91-170 16-94 (242)
132 3qsg_A NAD-binding phosphogluc 96.0 0.01 3.5E-07 57.5 6.6 79 92-180 23-103 (312)
133 3hg7_A D-isomer specific 2-hyd 96.0 0.0057 1.9E-07 59.8 4.8 106 74-192 121-230 (324)
134 2a9f_A Putative malic enzyme ( 96.0 0.0029 1E-07 63.0 2.8 118 71-193 148-289 (398)
135 2aef_A Calcium-gated potassium 95.9 0.012 4.2E-07 54.1 6.5 88 93-187 9-98 (234)
136 3d1l_A Putative NADP oxidoredu 95.8 0.013 4.5E-07 55.0 6.7 93 91-192 8-102 (266)
137 4g2n_A D-isomer specific 2-hyd 95.8 0.016 5.6E-07 57.0 7.5 91 89-192 169-263 (345)
138 3hwr_A 2-dehydropantoate 2-red 95.8 0.008 2.7E-07 58.4 5.2 95 92-191 18-119 (318)
139 2pzm_A Putative nucleotide sug 95.8 0.027 9.3E-07 54.4 9.1 103 89-195 16-138 (330)
140 3ew7_A LMO0794 protein; Q8Y8U8 95.7 0.023 7.7E-07 51.1 7.7 92 95-193 2-103 (221)
141 1nyt_A Shikimate 5-dehydrogena 95.7 0.0076 2.6E-07 57.2 4.5 76 90-172 116-192 (271)
142 3sxp_A ADP-L-glycero-D-mannohe 95.6 0.048 1.7E-06 53.3 10.2 108 90-198 7-143 (362)
143 3d4o_A Dipicolinate synthase s 95.6 0.0083 2.9E-07 57.6 4.5 72 90-170 152-223 (293)
144 3h2s_A Putative NADH-flavin re 95.6 0.022 7.4E-07 51.5 7.1 93 95-193 2-105 (224)
145 3phh_A Shikimate dehydrogenase 95.6 0.014 4.9E-07 55.4 6.0 34 93-127 118-151 (269)
146 3ehe_A UDP-glucose 4-epimerase 95.6 0.035 1.2E-06 53.0 8.9 99 94-198 2-119 (313)
147 1ks9_A KPA reductase;, 2-dehyd 95.6 0.035 1.2E-06 52.4 8.8 91 95-191 2-96 (291)
148 3r6d_A NAD-dependent epimerase 95.6 0.036 1.2E-06 50.1 8.5 98 94-195 6-110 (221)
149 3ghy_A Ketopantoate reductase 95.6 0.0055 1.9E-07 60.0 3.0 82 93-180 3-90 (335)
150 2pv7_A T-protein [includes: ch 95.6 0.027 9.2E-07 54.1 7.8 64 94-181 22-86 (298)
151 3ius_A Uncharacterized conserv 95.5 0.042 1.4E-06 51.6 9.1 97 93-198 5-108 (286)
152 2q1s_A Putative nucleotide sug 95.5 0.066 2.3E-06 52.7 10.8 107 90-198 29-156 (377)
153 2dc1_A L-aspartate dehydrogena 95.5 0.033 1.1E-06 51.5 8.0 80 95-193 2-82 (236)
154 3i6i_A Putative leucoanthocyan 95.5 0.023 8E-07 55.3 7.3 97 91-190 8-116 (346)
155 4g65_A TRK system potassium up 95.5 0.0093 3.2E-07 61.2 4.5 93 94-190 4-99 (461)
156 1p77_A Shikimate 5-dehydrogena 95.5 0.0092 3.1E-07 56.7 4.2 74 90-171 116-191 (272)
157 2ew2_A 2-dehydropantoate 2-red 95.5 0.015 5.1E-07 55.7 5.8 95 94-191 4-107 (316)
158 1edz_A 5,10-methylenetetrahydr 95.5 0.019 6.5E-07 55.8 6.4 81 90-172 174-257 (320)
159 3ko8_A NAD-dependent epimerase 95.5 0.045 1.5E-06 52.1 9.1 99 94-198 1-118 (312)
160 3hn2_A 2-dehydropantoate 2-red 95.5 0.027 9.1E-07 54.4 7.5 93 94-191 3-102 (312)
161 3qvo_A NMRA family protein; st 95.5 0.064 2.2E-06 49.1 9.8 101 93-197 23-129 (236)
162 1lu9_A Methylene tetrahydromet 95.4 0.0051 1.7E-07 58.8 2.2 76 91-169 117-197 (287)
163 2vns_A Metalloreductase steap3 95.4 0.023 7.8E-07 51.9 6.4 68 93-172 28-95 (215)
164 3k96_A Glycerol-3-phosphate de 95.4 0.016 5.4E-07 57.4 5.6 95 93-191 29-132 (356)
165 1pjc_A Protein (L-alanine dehy 95.4 0.0097 3.3E-07 59.0 4.1 78 90-172 164-242 (361)
166 2b69_A UDP-glucuronate decarbo 95.4 0.079 2.7E-06 51.2 10.6 105 89-198 23-146 (343)
167 2x6t_A ADP-L-glycero-D-manno-h 95.4 0.042 1.4E-06 53.6 8.6 103 89-198 42-168 (357)
168 3vps_A TUNA, NAD-dependent epi 95.4 0.016 5.5E-07 55.3 5.5 99 90-198 4-124 (321)
169 2hun_A 336AA long hypothetical 95.4 0.076 2.6E-06 51.0 10.4 106 93-198 3-132 (336)
170 2h78_A Hibadh, 3-hydroxyisobut 95.4 0.014 4.9E-07 55.9 5.1 74 94-178 4-78 (302)
171 1qp8_A Formate dehydrogenase; 95.3 0.012 4.2E-07 56.8 4.5 87 90-193 121-211 (303)
172 4ezb_A Uncharacterized conserv 95.3 0.031 1E-06 54.3 7.2 90 93-192 24-121 (317)
173 2gf2_A Hibadh, 3-hydroxyisobut 95.3 0.016 5.4E-07 55.3 5.0 74 95-179 2-76 (296)
174 2d5c_A AROE, shikimate 5-dehyd 95.3 0.011 3.9E-07 55.6 3.9 68 90-171 114-182 (263)
175 3doj_A AT3G25530, dehydrogenas 95.2 0.026 8.9E-07 54.5 6.5 77 90-177 18-95 (310)
176 2gas_A Isoflavone reductase; N 95.2 0.048 1.6E-06 51.8 8.3 93 93-188 2-107 (307)
177 3jtm_A Formate dehydrogenase, 95.2 0.013 4.4E-07 57.9 4.3 108 74-192 141-256 (351)
178 3g17_A Similar to 2-dehydropan 95.2 0.016 5.4E-07 55.6 4.8 81 94-181 3-83 (294)
179 2rir_A Dipicolinate synthase, 95.2 0.016 5.5E-07 55.8 4.8 72 90-170 154-225 (300)
180 3cky_A 2-hydroxymethyl glutara 95.2 0.025 8.5E-07 54.0 6.2 88 94-192 5-98 (301)
181 4f3y_A DHPR, dihydrodipicolina 95.2 0.044 1.5E-06 52.1 7.7 91 93-192 7-104 (272)
182 2q1w_A Putative nucleotide sug 95.2 0.079 2.7E-06 51.1 9.8 102 90-195 18-139 (333)
183 3i83_A 2-dehydropantoate 2-red 95.2 0.019 6.5E-07 55.7 5.3 94 94-191 3-104 (320)
184 3tri_A Pyrroline-5-carboxylate 95.2 0.036 1.2E-06 52.8 7.1 81 92-181 2-84 (280)
185 3l9w_A Glutathione-regulated p 95.1 0.044 1.5E-06 55.3 8.1 89 93-186 4-94 (413)
186 1rkx_A CDP-glucose-4,6-dehydra 95.1 0.058 2E-06 52.5 8.8 80 89-169 5-89 (357)
187 3pef_A 6-phosphogluconate dehy 95.1 0.029 1E-06 53.4 6.4 88 94-192 2-95 (287)
188 2g76_A 3-PGDH, D-3-phosphoglyc 95.1 0.017 5.7E-07 56.8 4.6 92 89-193 161-256 (335)
189 1gq2_A Malic enzyme; oxidoredu 95.1 0.034 1.2E-06 57.3 7.0 106 89-195 278-397 (555)
190 3c24_A Putative oxidoreductase 95.1 0.022 7.7E-07 54.1 5.4 87 94-192 12-101 (286)
191 3l07_A Bifunctional protein fo 95.1 0.023 7.7E-07 54.2 5.3 81 90-198 158-239 (285)
192 1j4a_A D-LDH, D-lactate dehydr 95.0 0.013 4.4E-07 57.5 3.7 91 89-193 142-236 (333)
193 2rcy_A Pyrroline carboxylate r 95.0 0.048 1.6E-06 50.9 7.5 72 93-180 4-78 (262)
194 2x4g_A Nucleoside-diphosphate- 95.0 0.1 3.5E-06 50.2 10.1 99 95-198 15-131 (342)
195 2pi1_A D-lactate dehydrogenase 95.0 0.012 4.2E-07 57.7 3.3 91 89-193 137-231 (334)
196 4gbj_A 6-phosphogluconate dehy 95.0 0.072 2.4E-06 51.2 8.8 103 93-196 5-126 (297)
197 2g5c_A Prephenate dehydrogenas 95.0 0.07 2.4E-06 50.4 8.6 91 94-192 2-96 (281)
198 3obb_A Probable 3-hydroxyisobu 95.0 0.065 2.2E-06 51.6 8.4 108 94-205 4-140 (300)
199 2yq5_A D-isomer specific 2-hyd 95.0 0.02 6.9E-07 56.3 4.8 89 89-192 144-236 (343)
200 3gg9_A D-3-phosphoglycerate de 95.0 0.0063 2.1E-07 60.2 1.2 92 89-192 156-251 (352)
201 1o0s_A NAD-ME, NAD-dependent m 94.9 0.037 1.3E-06 57.4 6.9 123 70-195 281-435 (605)
202 3p7m_A Malate dehydrogenase; p 94.9 0.032 1.1E-06 54.4 6.1 74 91-171 3-84 (321)
203 1pj3_A NAD-dependent malic enz 94.9 0.05 1.7E-06 56.2 7.8 106 89-194 280-401 (564)
204 1yb4_A Tartronic semialdehyde 94.9 0.019 6.6E-07 54.6 4.5 73 94-178 4-77 (295)
205 1z82_A Glycerol-3-phosphate de 94.9 0.014 4.9E-07 56.9 3.6 94 92-192 13-111 (335)
206 4fgw_A Glycerol-3-phosphate de 94.9 0.031 1E-06 55.9 6.0 95 94-191 35-150 (391)
207 2vhw_A Alanine dehydrogenase; 94.9 0.018 6.1E-07 57.4 4.3 78 90-172 165-243 (377)
208 2z1m_A GDP-D-mannose dehydrata 94.9 0.046 1.6E-06 52.6 7.2 107 91-198 1-132 (345)
209 4dzn_A Coiled-coil peptide CC- 94.9 0.059 2E-06 32.0 4.7 29 9-37 3-31 (33)
210 2uyy_A N-PAC protein; long-cha 94.9 0.022 7.6E-07 54.9 4.9 74 94-178 31-105 (316)
211 1xdw_A NAD+-dependent (R)-2-hy 94.9 0.017 5.8E-07 56.6 4.0 89 89-192 142-234 (331)
212 1r6d_A TDP-glucose-4,6-dehydra 94.9 0.2 6.7E-06 48.1 11.7 104 95-198 2-132 (337)
213 3rft_A Uronate dehydrogenase; 94.8 0.064 2.2E-06 50.2 7.9 95 92-194 2-112 (267)
214 1txg_A Glycerol-3-phosphate de 94.8 0.023 7.7E-07 55.1 4.8 96 95-191 2-103 (335)
215 1lld_A L-lactate dehydrogenase 94.8 0.036 1.2E-06 53.5 6.1 72 93-171 7-86 (319)
216 1qyc_A Phenylcoumaran benzylic 94.7 0.085 2.9E-06 50.0 8.6 94 93-189 4-109 (308)
217 2j6i_A Formate dehydrogenase; 94.7 0.018 6.2E-07 57.1 3.8 94 90-193 161-258 (364)
218 2bll_A Protein YFBG; decarboxy 94.7 0.12 4.1E-06 49.7 9.7 100 95-198 2-122 (345)
219 3ijp_A DHPR, dihydrodipicolina 94.7 0.087 3E-06 50.4 8.4 94 94-192 22-119 (288)
220 1jay_A Coenzyme F420H2:NADP+ o 94.7 0.013 4.3E-07 53.0 2.4 90 95-192 2-97 (212)
221 1pzg_A LDH, lactate dehydrogen 94.7 0.038 1.3E-06 54.1 6.0 71 94-170 10-88 (331)
222 3ggo_A Prephenate dehydrogenas 94.7 0.081 2.8E-06 51.2 8.4 90 94-191 34-127 (314)
223 3qha_A Putative oxidoreductase 94.7 0.06 2.1E-06 51.5 7.4 89 93-193 15-106 (296)
224 1oc2_A DTDP-glucose 4,6-dehydr 94.7 0.18 6.2E-06 48.6 10.9 104 94-198 5-130 (348)
225 2jl1_A Triphenylmethane reduct 94.7 0.062 2.1E-06 50.4 7.4 97 94-195 1-109 (287)
226 1tt5_A APPBP1, amyloid protein 94.7 0.025 8.7E-07 58.9 5.0 47 229-276 483-529 (531)
227 2f1k_A Prephenate dehydrogenas 94.7 0.065 2.2E-06 50.5 7.5 87 95-191 2-90 (279)
228 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.029 9.9E-07 54.8 5.2 96 94-191 5-108 (359)
229 3ba1_A HPPR, hydroxyphenylpyru 94.7 0.027 9.3E-07 55.2 4.9 88 90-193 161-252 (333)
230 4e21_A 6-phosphogluconate dehy 94.6 0.042 1.4E-06 54.4 6.3 104 91-195 20-143 (358)
231 2eez_A Alanine dehydrogenase; 94.6 0.02 7E-07 56.8 3.9 77 90-171 163-240 (369)
232 1dxy_A D-2-hydroxyisocaproate 94.6 0.037 1.3E-06 54.2 5.7 90 89-193 141-234 (333)
233 1sby_A Alcohol dehydrogenase; 94.6 0.043 1.5E-06 50.9 5.9 37 91-127 3-40 (254)
234 3pdu_A 3-hydroxyisobutyrate de 94.6 0.029 1E-06 53.3 4.8 73 94-177 2-75 (287)
235 1dih_A Dihydrodipicolinate red 94.6 0.054 1.8E-06 51.5 6.6 94 93-193 5-104 (273)
236 3e48_A Putative nucleoside-dip 94.6 0.25 8.6E-06 46.3 11.4 96 95-194 2-107 (289)
237 2c5a_A GDP-mannose-3', 5'-epim 94.6 0.15 5E-06 50.3 10.1 100 92-196 28-148 (379)
238 3g0o_A 3-hydroxyisobutyrate de 94.5 0.032 1.1E-06 53.5 5.1 75 93-177 7-82 (303)
239 1np3_A Ketol-acid reductoisome 94.5 0.035 1.2E-06 54.4 5.3 91 89-191 12-106 (338)
240 2r6j_A Eugenol synthase 1; phe 94.5 0.085 2.9E-06 50.5 8.0 93 94-189 12-111 (318)
241 1vpd_A Tartronate semialdehyde 94.5 0.054 1.9E-06 51.6 6.5 88 94-192 6-99 (299)
242 3l6d_A Putative oxidoreductase 94.5 0.042 1.4E-06 52.9 5.8 92 91-193 7-102 (306)
243 2zyd_A 6-phosphogluconate dehy 94.5 0.061 2.1E-06 55.4 7.2 38 88-126 10-47 (480)
244 3c1o_A Eugenol synthase; pheny 94.5 0.15 5.1E-06 48.7 9.6 93 93-188 4-108 (321)
245 3ce6_A Adenosylhomocysteinase; 94.4 0.022 7.6E-07 58.7 3.8 71 90-172 271-341 (494)
246 2cuk_A Glycerate dehydrogenase 94.4 0.045 1.5E-06 53.1 5.7 86 90-193 141-230 (311)
247 3nzo_A UDP-N-acetylglucosamine 94.4 0.12 4E-06 51.7 9.0 105 89-193 31-165 (399)
248 1qyd_A Pinoresinol-lariciresin 94.4 0.11 3.8E-06 49.3 8.4 93 93-188 4-111 (313)
249 3o38_A Short chain dehydrogena 94.3 0.054 1.8E-06 50.6 6.0 37 90-127 19-57 (266)
250 1yj8_A Glycerol-3-phosphate de 94.3 0.044 1.5E-06 54.3 5.7 84 94-180 22-123 (375)
251 2cvz_A Dehydrogenase, 3-hydrox 94.3 0.032 1.1E-06 52.8 4.4 86 94-192 2-90 (289)
252 1y1p_A ARII, aldehyde reductas 94.3 0.094 3.2E-06 50.3 7.9 78 91-169 9-92 (342)
253 3d0o_A L-LDH 1, L-lactate dehy 94.3 0.046 1.6E-06 53.1 5.6 73 91-171 4-85 (317)
254 3kb6_A D-lactate dehydrogenase 94.3 0.034 1.2E-06 54.5 4.6 90 89-192 137-230 (334)
255 2izz_A Pyrroline-5-carboxylate 94.3 0.049 1.7E-06 52.8 5.7 89 93-191 22-117 (322)
256 4huj_A Uncharacterized protein 94.3 0.027 9.2E-07 51.5 3.6 73 94-177 24-98 (220)
257 3p2o_A Bifunctional protein fo 94.2 0.08 2.7E-06 50.4 6.9 58 89-171 156-214 (285)
258 1wwk_A Phosphoglycerate dehydr 94.2 0.024 8.2E-07 54.9 3.3 92 89-193 138-233 (307)
259 1vl0_A DTDP-4-dehydrorhamnose 94.2 0.068 2.3E-06 50.3 6.5 90 90-198 9-118 (292)
260 4a26_A Putative C-1-tetrahydro 94.1 0.069 2.4E-06 51.2 6.3 77 89-193 161-240 (300)
261 3gg2_A Sugar dehydrogenase, UD 94.1 0.081 2.8E-06 53.9 7.3 99 94-193 3-123 (450)
262 3ngx_A Bifunctional protein fo 94.1 0.057 1.9E-06 51.2 5.6 77 91-195 148-225 (276)
263 3n58_A Adenosylhomocysteinase; 94.1 0.025 8.6E-07 57.3 3.4 70 90-171 244-313 (464)
264 3kkj_A Amine oxidase, flavin-c 94.1 0.033 1.1E-06 50.2 3.9 32 94-126 3-34 (336)
265 1sb8_A WBPP; epimerase, 4-epim 94.1 0.13 4.6E-06 49.8 8.5 108 90-198 24-158 (352)
266 1hyh_A L-hicdh, L-2-hydroxyiso 94.1 0.032 1.1E-06 53.8 4.0 71 94-172 2-81 (309)
267 3rku_A Oxidoreductase YMR226C; 94.1 0.073 2.5E-06 50.7 6.4 82 87-168 27-123 (287)
268 2hrz_A AGR_C_4963P, nucleoside 94.1 0.17 5.9E-06 48.7 9.2 75 91-169 12-95 (342)
269 2ejw_A HDH, homoserine dehydro 94.1 0.099 3.4E-06 51.1 7.4 86 93-191 3-97 (332)
270 1npy_A Hypothetical shikimate 94.1 0.049 1.7E-06 51.7 5.1 67 92-170 118-185 (271)
271 1a4i_A Methylenetetrahydrofola 94.1 0.091 3.1E-06 50.4 6.9 77 90-194 162-239 (301)
272 3sc6_A DTDP-4-dehydrorhamnose 94.0 0.06 2E-06 50.6 5.7 85 95-198 7-111 (287)
273 1x0v_A GPD-C, GPDH-C, glycerol 94.0 0.064 2.2E-06 52.4 6.1 95 94-191 9-123 (354)
274 1yo6_A Putative carbonyl reduc 94.0 0.066 2.3E-06 49.0 5.8 36 92-127 2-39 (250)
275 2nac_A NAD-dependent formate d 94.0 0.065 2.2E-06 53.6 6.0 93 90-193 188-284 (393)
276 2d4a_B Malate dehydrogenase; a 93.9 0.068 2.3E-06 51.6 5.9 70 95-171 1-78 (308)
277 1mx3_A CTBP1, C-terminal bindi 93.9 0.036 1.2E-06 54.6 4.0 93 90-194 165-261 (347)
278 1y81_A Conserved hypothetical 93.9 0.39 1.3E-05 40.5 9.9 87 87-190 8-98 (138)
279 1orr_A CDP-tyvelose-2-epimeras 93.9 0.093 3.2E-06 50.5 6.9 104 94-198 2-130 (347)
280 2yy0_A C-MYC-binding protein; 93.9 0.095 3.2E-06 36.7 4.9 34 7-40 18-51 (53)
281 2vt3_A REX, redox-sensing tran 93.9 0.17 5.8E-06 46.3 8.1 87 93-189 85-173 (215)
282 1yqg_A Pyrroline-5-carboxylate 93.9 0.024 8.1E-07 53.0 2.5 71 95-175 2-72 (263)
283 1evy_A Glycerol-3-phosphate de 93.8 0.048 1.6E-06 53.7 4.8 94 95-192 17-124 (366)
284 3enk_A UDP-glucose 4-epimerase 93.8 0.13 4.4E-06 49.5 7.7 104 93-197 5-133 (341)
285 4dio_A NAD(P) transhydrogenase 93.8 0.027 9.3E-07 56.5 2.9 79 90-169 187-284 (405)
286 1oju_A MDH, malate dehydrogena 93.8 0.082 2.8E-06 50.8 6.1 70 95-171 2-80 (294)
287 4a5o_A Bifunctional protein fo 93.8 0.099 3.4E-06 49.8 6.5 58 89-171 157-215 (286)
288 2c20_A UDP-glucose 4-epimerase 93.8 0.22 7.4E-06 47.6 9.2 100 94-198 2-123 (330)
289 3lk7_A UDP-N-acetylmuramoylala 93.8 0.097 3.3E-06 53.3 7.0 93 90-190 6-101 (451)
290 4imr_A 3-oxoacyl-(acyl-carrier 93.7 0.12 4E-06 48.8 7.1 43 83-126 23-66 (275)
291 3k5p_A D-3-phosphoglycerate de 93.7 0.032 1.1E-06 56.2 3.3 90 89-193 152-245 (416)
292 3uko_A Alcohol dehydrogenase c 93.7 0.064 2.2E-06 53.1 5.4 81 92-175 193-278 (378)
293 1t2d_A LDH-P, L-lactate dehydr 93.7 0.087 3E-06 51.2 6.3 70 94-170 5-82 (322)
294 2gcg_A Glyoxylate reductase/hy 93.7 0.024 8.1E-07 55.5 2.2 93 89-193 151-247 (330)
295 2iz1_A 6-phosphogluconate dehy 93.7 0.13 4.6E-06 52.6 7.9 93 93-192 5-103 (474)
296 3gt0_A Pyrroline-5-carboxylate 93.7 0.037 1.2E-06 51.5 3.4 75 94-177 3-80 (247)
297 1leh_A Leucine dehydrogenase; 93.6 0.051 1.7E-06 53.9 4.5 37 90-127 170-206 (364)
298 3b1f_A Putative prephenate deh 93.6 0.061 2.1E-06 51.1 4.9 80 93-180 6-86 (290)
299 1mv8_A GMD, GDP-mannose 6-dehy 93.6 0.13 4.3E-06 52.2 7.5 71 95-172 2-88 (436)
300 4hy3_A Phosphoglycerate oxidor 93.6 0.051 1.7E-06 53.9 4.4 91 89-192 172-266 (365)
301 1ek6_A UDP-galactose 4-epimera 93.6 0.14 4.7E-06 49.4 7.5 105 93-198 2-137 (348)
302 3m6i_A L-arabinitol 4-dehydrog 93.6 0.11 3.8E-06 51.0 6.8 80 92-173 179-265 (363)
303 2o4c_A Erythronate-4-phosphate 93.6 0.034 1.2E-06 55.4 3.1 87 90-192 113-207 (380)
304 1kew_A RMLB;, DTDP-D-glucose 4 93.5 0.31 1.1E-05 47.2 10.0 74 95-169 2-82 (361)
305 1b0a_A Protein (fold bifunctio 93.5 0.073 2.5E-06 50.7 5.2 77 90-194 156-233 (288)
306 4e5n_A Thermostable phosphite 93.5 0.019 6.4E-07 56.2 1.1 92 90-193 142-237 (330)
307 3qy9_A DHPR, dihydrodipicolina 93.5 0.12 4.2E-06 48.1 6.6 78 94-191 4-82 (243)
308 2yjz_A Metalloreductase steap4 92.6 0.013 4.6E-07 53.0 0.0 72 91-175 17-88 (201)
309 1xq6_A Unknown protein; struct 93.5 0.19 6.4E-06 45.8 7.9 73 92-169 3-78 (253)
310 4gx0_A TRKA domain protein; me 93.5 0.46 1.6E-05 49.6 11.8 85 94-187 349-435 (565)
311 2i99_A MU-crystallin homolog; 93.5 0.057 1.9E-06 52.2 4.4 72 91-170 133-206 (312)
312 1i36_A Conserved hypothetical 93.5 0.082 2.8E-06 49.3 5.4 74 95-180 2-76 (264)
313 3gvp_A Adenosylhomocysteinase 93.4 0.023 7.7E-07 57.4 1.6 71 90-172 217-287 (435)
314 2zcu_A Uncharacterized oxidore 93.4 0.17 5.8E-06 47.2 7.7 95 95-194 1-105 (286)
315 3p2y_A Alanine dehydrogenase/p 93.4 0.033 1.1E-06 55.4 2.7 80 90-170 181-275 (381)
316 2p4q_A 6-phosphogluconate dehy 93.4 0.13 4.5E-06 53.1 7.3 35 92-127 9-43 (497)
317 1guz_A Malate dehydrogenase; o 93.4 0.1 3.4E-06 50.4 6.1 70 95-171 2-80 (310)
318 1l7d_A Nicotinamide nucleotide 93.4 0.059 2E-06 53.7 4.5 37 90-127 169-205 (384)
319 2c2x_A Methylenetetrahydrofola 93.4 0.1 3.4E-06 49.6 5.8 78 90-194 155-234 (281)
320 3o9z_A Lipopolysaccaride biosy 93.4 0.37 1.3E-05 46.3 10.1 87 94-190 4-101 (312)
321 4ea9_A Perosamine N-acetyltran 93.3 0.15 5.2E-06 46.3 6.9 88 92-189 11-99 (220)
322 3ado_A Lambda-crystallin; L-gu 93.3 0.068 2.3E-06 51.9 4.7 90 93-183 6-111 (319)
323 3qiv_A Short-chain dehydrogena 93.3 0.095 3.3E-06 48.4 5.6 36 90-126 6-42 (253)
324 4dll_A 2-hydroxy-3-oxopropiona 93.3 0.13 4.3E-06 49.9 6.6 93 90-193 28-125 (320)
325 1z7e_A Protein aRNA; rossmann 93.3 0.22 7.6E-06 53.1 9.1 104 91-198 313-437 (660)
326 3ego_A Probable 2-dehydropanto 93.2 0.062 2.1E-06 51.8 4.3 80 94-180 3-87 (307)
327 3h9u_A Adenosylhomocysteinase; 93.2 0.07 2.4E-06 53.9 4.7 69 90-170 208-276 (436)
328 3st7_A Capsular polysaccharide 93.2 0.12 4.1E-06 50.6 6.5 80 95-196 2-97 (369)
329 3euw_A MYO-inositol dehydrogen 93.2 0.16 5.6E-06 49.4 7.3 87 94-190 5-94 (344)
330 2wm3_A NMRA-like family domain 93.2 0.15 5.3E-06 48.1 7.0 99 93-194 5-116 (299)
331 1ez4_A Lactate dehydrogenase; 93.1 0.11 3.9E-06 50.3 6.0 70 94-171 6-83 (318)
332 1eq2_A ADP-L-glycero-D-mannohe 93.1 0.31 1E-05 46.0 9.0 97 95-198 1-121 (310)
333 3fpc_A NADP-dependent alcohol 93.1 0.043 1.5E-06 53.8 3.0 82 92-176 166-251 (352)
334 3evn_A Oxidoreductase, GFO/IDH 93.1 0.18 6.2E-06 48.8 7.5 90 92-190 4-96 (329)
335 2bgk_A Rhizome secoisolaricire 93.1 0.1 3.5E-06 48.8 5.5 36 90-126 13-49 (278)
336 4fs3_A Enoyl-[acyl-carrier-pro 93.0 0.14 5E-06 47.7 6.4 36 90-126 3-41 (256)
337 3nv9_A Malic enzyme; rossmann 93.0 0.062 2.1E-06 54.3 4.0 123 69-195 177-329 (487)
338 2ahr_A Putative pyrroline carb 93.0 0.057 1.9E-06 50.4 3.6 71 94-174 4-74 (259)
339 1sc6_A PGDH, D-3-phosphoglycer 93.0 0.074 2.5E-06 53.5 4.6 90 89-193 141-234 (404)
340 1x7d_A Ornithine cyclodeaminas 93.0 0.12 4.1E-06 50.9 6.0 75 91-171 127-205 (350)
341 2ydy_A Methionine adenosyltran 93.0 0.15 5E-06 48.6 6.5 93 93-198 2-115 (315)
342 1gdh_A D-glycerate dehydrogena 92.9 0.055 1.9E-06 52.6 3.4 92 90-193 143-239 (320)
343 1y6j_A L-lactate dehydrogenase 92.9 0.078 2.7E-06 51.5 4.5 71 93-171 7-85 (318)
344 2duw_A Putative COA-binding pr 92.9 0.59 2E-05 39.6 9.5 86 90-190 9-99 (145)
345 3rih_A Short chain dehydrogena 92.9 0.16 5.4E-06 48.5 6.5 37 90-127 38-75 (293)
346 3c7a_A Octopine dehydrogenase; 92.8 0.16 5.5E-06 50.7 6.8 95 94-190 3-114 (404)
347 4a7p_A UDP-glucose dehydrogena 92.8 0.27 9.4E-06 49.9 8.6 78 93-171 8-95 (446)
348 4dqv_A Probable peptide synthe 92.8 0.16 5.5E-06 51.9 6.9 107 91-197 71-218 (478)
349 1xg5_A ARPG836; short chain de 92.8 0.15 5.2E-06 47.9 6.3 37 90-127 29-66 (279)
350 3d64_A Adenosylhomocysteinase; 92.8 0.03 1E-06 57.6 1.4 92 90-196 274-368 (494)
351 1e6u_A GDP-fucose synthetase; 92.8 0.13 4.3E-06 49.1 5.8 87 93-198 3-112 (321)
352 2ho3_A Oxidoreductase, GFO/IDH 92.8 0.23 8E-06 47.8 7.7 87 95-190 3-91 (325)
353 3oet_A Erythronate-4-phosphate 92.8 0.078 2.7E-06 52.8 4.3 87 90-192 116-210 (381)
354 3t4x_A Oxidoreductase, short c 92.8 0.12 4E-06 48.4 5.4 37 90-127 7-44 (267)
355 1v8b_A Adenosylhomocysteinase; 92.8 0.051 1.8E-06 55.7 3.0 92 90-196 254-348 (479)
356 2pk3_A GDP-6-deoxy-D-LYXO-4-he 92.8 0.38 1.3E-05 45.7 9.1 72 89-169 8-83 (321)
357 3tl2_A Malate dehydrogenase; c 92.6 0.077 2.6E-06 51.5 4.0 74 91-171 6-89 (315)
358 4g65_A TRK system potassium up 92.6 0.14 4.8E-06 52.3 6.1 95 93-191 235-331 (461)
359 3nep_X Malate dehydrogenase; h 92.6 0.14 4.8E-06 49.6 5.8 70 95-171 2-80 (314)
360 2pgd_A 6-phosphogluconate dehy 92.6 0.19 6.6E-06 51.6 7.2 32 94-126 3-34 (482)
361 3gvi_A Malate dehydrogenase; N 92.6 0.084 2.9E-06 51.4 4.2 75 90-171 4-86 (324)
362 3e03_A Short chain dehydrogena 92.6 0.24 8.1E-06 46.5 7.3 38 90-128 3-41 (274)
363 2qyt_A 2-dehydropantoate 2-red 92.6 0.092 3.1E-06 50.2 4.5 83 95-181 10-104 (317)
364 3ay3_A NAD-dependent epimerase 92.6 0.14 4.9E-06 47.5 5.7 94 94-195 3-112 (267)
365 1rpn_A GDP-mannose 4,6-dehydra 92.6 0.28 9.5E-06 47.0 7.9 108 90-198 11-143 (335)
366 3nyw_A Putative oxidoreductase 92.5 0.11 3.7E-06 48.2 4.8 37 90-127 4-41 (250)
367 3ftp_A 3-oxoacyl-[acyl-carrier 92.5 0.063 2.1E-06 50.6 3.1 36 90-126 25-61 (270)
368 4ej6_A Putative zinc-binding d 92.5 0.098 3.4E-06 51.7 4.7 36 92-127 182-217 (370)
369 3nkl_A UDP-D-quinovosamine 4-d 92.5 0.37 1.3E-05 40.1 7.7 89 93-190 4-97 (141)
370 3pk0_A Short-chain dehydrogena 92.5 0.094 3.2E-06 49.0 4.3 37 90-127 7-44 (262)
371 3ip1_A Alcohol dehydrogenase, 92.4 0.11 3.7E-06 52.0 4.9 75 92-171 213-293 (404)
372 1mld_A Malate dehydrogenase; o 92.4 0.21 7.1E-06 48.3 6.8 74 95-171 2-79 (314)
373 3rkr_A Short chain oxidoreduct 92.4 0.13 4.4E-06 48.0 5.2 79 90-169 26-115 (262)
374 2a35_A Hypothetical protein PA 92.4 0.33 1.1E-05 43.1 7.8 93 92-194 4-115 (215)
375 1xgk_A Nitrogen metabolite rep 92.4 0.64 2.2E-05 45.3 10.4 99 93-194 5-114 (352)
376 3v8b_A Putative dehydrogenase, 92.4 0.17 6E-06 47.8 6.1 37 90-127 25-62 (283)
377 3afn_B Carbonyl reductase; alp 92.4 0.15 5.3E-06 46.8 5.6 36 90-126 4-40 (258)
378 1vkn_A N-acetyl-gamma-glutamyl 92.3 0.15 5.2E-06 50.1 5.7 94 94-193 14-108 (351)
379 3imf_A Short chain dehydrogena 92.2 0.16 5.6E-06 47.1 5.6 36 90-126 3-39 (257)
380 3grp_A 3-oxoacyl-(acyl carrier 92.2 0.11 3.7E-06 48.8 4.3 37 89-126 23-60 (266)
381 3awd_A GOX2181, putative polyo 92.2 0.13 4.6E-06 47.4 5.0 36 90-126 10-46 (260)
382 1pl8_A Human sorbitol dehydrog 92.2 0.094 3.2E-06 51.4 4.1 35 92-126 171-205 (356)
383 2zqz_A L-LDH, L-lactate dehydr 92.2 0.14 4.8E-06 49.9 5.2 71 93-171 9-87 (326)
384 1n7h_A GDP-D-mannose-4,6-dehyd 92.2 0.29 9.8E-06 48.0 7.7 75 94-169 29-115 (381)
385 1t2a_A GDP-mannose 4,6 dehydra 92.2 0.5 1.7E-05 46.1 9.4 75 94-169 25-111 (375)
386 1lnq_A MTHK channels, potassiu 92.2 0.17 5.9E-06 49.1 5.9 87 93-186 115-203 (336)
387 3lf2_A Short chain oxidoreduct 92.2 0.16 5.6E-06 47.3 5.5 36 90-126 5-41 (265)
388 3r1i_A Short-chain type dehydr 92.2 0.17 5.7E-06 47.8 5.6 36 90-126 29-65 (276)
389 3rd5_A Mypaa.01249.C; ssgcid, 92.1 0.18 6.2E-06 47.7 5.8 77 89-168 12-94 (291)
390 1iy8_A Levodione reductase; ox 92.1 0.19 6.4E-06 46.9 5.9 36 90-126 10-46 (267)
391 2bd0_A Sepiapterin reductase; 92.1 0.2 6.7E-06 45.8 5.9 77 93-169 2-95 (244)
392 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.1 0.26 9E-06 50.5 7.4 91 95-192 3-103 (478)
393 1sny_A Sniffer CG10964-PA; alp 92.1 0.15 5E-06 47.4 5.0 39 89-127 17-58 (267)
394 2hjr_A Malate dehydrogenase; m 92.0 0.11 3.7E-06 50.7 4.2 72 92-170 13-92 (328)
395 4hb9_A Similarities with proba 92.0 0.1 3.6E-06 51.2 4.2 33 94-127 2-34 (412)
396 3ucx_A Short chain dehydrogena 92.0 0.19 6.6E-06 46.8 5.9 36 90-126 8-44 (264)
397 2ewd_A Lactate dehydrogenase,; 92.0 0.11 3.6E-06 50.3 4.1 70 93-169 4-81 (317)
398 3cea_A MYO-inositol 2-dehydrog 92.0 0.25 8.5E-06 48.0 6.8 89 93-190 8-100 (346)
399 2dq4_A L-threonine 3-dehydroge 92.0 0.072 2.5E-06 51.9 2.9 76 92-173 164-244 (343)
400 2ag5_A DHRS6, dehydrogenase/re 92.0 0.27 9.3E-06 45.2 6.8 36 90-126 3-39 (246)
401 3h7a_A Short chain dehydrogena 92.0 0.2 6.8E-06 46.4 5.9 79 90-169 4-92 (252)
402 1n2s_A DTDP-4-, DTDP-glucose o 92.0 0.18 6.3E-06 47.4 5.7 87 95-198 2-109 (299)
403 3un1_A Probable oxidoreductase 92.0 0.41 1.4E-05 44.5 8.1 37 89-126 24-61 (260)
404 3ak4_A NADH-dependent quinucli 91.9 0.15 5.1E-06 47.5 4.9 36 90-126 9-45 (263)
405 3pid_A UDP-glucose 6-dehydroge 91.9 0.36 1.2E-05 48.8 8.1 79 91-171 34-120 (432)
406 1v8c_A MOAD related protein; r 91.9 0.029 1E-06 49.3 -0.0 36 343-382 122-157 (168)
407 3uuw_A Putative oxidoreductase 91.9 0.086 3E-06 50.5 3.4 90 91-190 4-95 (308)
408 3i1j_A Oxidoreductase, short c 91.9 0.16 5.4E-06 46.6 5.1 37 90-127 11-48 (247)
409 3lyl_A 3-oxoacyl-(acyl-carrier 91.9 0.17 6E-06 46.4 5.3 36 91-127 3-39 (247)
410 1e3i_A Alcohol dehydrogenase, 91.9 0.094 3.2E-06 51.8 3.7 80 92-174 195-279 (376)
411 4gwg_A 6-phosphogluconate dehy 91.9 0.24 8.2E-06 50.9 6.8 102 93-195 4-131 (484)
412 1nvt_A Shikimate 5'-dehydrogen 91.9 0.072 2.4E-06 50.8 2.7 72 90-170 125-203 (287)
413 4fc7_A Peroxisomal 2,4-dienoyl 91.9 0.13 4.5E-06 48.4 4.6 36 90-126 24-60 (277)
414 2d8a_A PH0655, probable L-thre 91.8 0.15 5.2E-06 49.7 5.1 35 92-126 167-201 (348)
415 2o23_A HADH2 protein; HSD17B10 91.8 0.21 7.3E-06 46.2 5.9 36 90-126 9-45 (265)
416 1p0f_A NADP-dependent alcohol 91.8 0.079 2.7E-06 52.3 3.0 35 92-126 191-225 (373)
417 3kvo_A Hydroxysteroid dehydrog 91.8 0.36 1.2E-05 47.2 7.8 80 89-169 41-138 (346)
418 3gaf_A 7-alpha-hydroxysteroid 91.8 0.15 5.1E-06 47.4 4.7 36 90-126 9-45 (256)
419 3svt_A Short-chain type dehydr 91.8 0.24 8.3E-06 46.6 6.3 38 89-127 7-45 (281)
420 2glx_A 1,5-anhydro-D-fructose 91.8 0.25 8.6E-06 47.6 6.6 87 95-190 2-91 (332)
421 3fr7_A Putative ketol-acid red 91.8 0.28 9.5E-06 50.3 6.9 88 87-181 47-142 (525)
422 3ijr_A Oxidoreductase, short c 91.7 0.23 7.8E-06 47.2 6.0 37 89-126 43-80 (291)
423 1f06_A MESO-diaminopimelate D- 91.7 0.29 9.8E-06 47.4 6.8 86 93-192 3-89 (320)
424 2jhf_A Alcohol dehydrogenase E 91.7 0.12 4.2E-06 50.9 4.2 35 92-126 191-225 (374)
425 3v2h_A D-beta-hydroxybutyrate 91.7 0.22 7.5E-06 47.0 5.8 36 89-125 21-57 (281)
426 2jah_A Clavulanic acid dehydro 91.7 0.22 7.7E-06 45.9 5.8 37 90-127 4-41 (247)
427 1yb1_A 17-beta-hydroxysteroid 91.6 0.21 7.2E-06 46.8 5.7 37 90-127 28-65 (272)
428 1fmc_A 7 alpha-hydroxysteroid 91.6 0.12 4E-06 47.6 3.8 36 90-126 8-44 (255)
429 3g79_A NDP-N-acetyl-D-galactos 91.6 0.19 6.6E-06 51.5 5.7 37 92-128 17-54 (478)
430 3ajr_A NDP-sugar epimerase; L- 91.6 0.67 2.3E-05 43.8 9.3 94 95-197 1-116 (317)
431 1a93_B MAX protein, coiled coi 91.6 0.15 5E-06 31.9 2.9 27 9-35 8-34 (34)
432 3tox_A Short chain dehydrogena 91.6 0.14 4.7E-06 48.5 4.3 37 90-127 5-42 (280)
433 3fhl_A Putative oxidoreductase 91.6 0.42 1.4E-05 46.9 7.9 86 93-190 5-94 (362)
434 3c1a_A Putative oxidoreductase 91.5 0.25 8.5E-06 47.4 6.2 85 94-190 11-98 (315)
435 1zk4_A R-specific alcohol dehy 91.5 0.18 6.1E-06 46.3 5.0 36 90-126 3-39 (251)
436 2zat_A Dehydrogenase/reductase 91.5 0.2 6.8E-06 46.5 5.3 37 89-126 10-47 (260)
437 4f6c_A AUSA reductase domain p 91.5 0.11 3.7E-06 52.1 3.7 106 91-199 67-202 (427)
438 3tsc_A Putative oxidoreductase 91.5 0.48 1.6E-05 44.4 8.1 36 90-126 8-44 (277)
439 3vku_A L-LDH, L-lactate dehydr 91.5 0.13 4.5E-06 50.1 4.1 72 92-171 8-87 (326)
440 1f8f_A Benzyl alcohol dehydrog 91.5 0.066 2.2E-06 52.8 2.0 35 92-126 190-224 (371)
441 4a2c_A Galactitol-1-phosphate 91.5 0.12 4.1E-06 50.2 3.9 36 91-126 159-194 (346)
442 1zem_A Xylitol dehydrogenase; 91.4 0.27 9.1E-06 45.7 6.1 36 90-126 4-40 (262)
443 4fn4_A Short chain dehydrogena 91.4 0.25 8.5E-06 46.3 5.8 37 89-126 3-40 (254)
444 3pxx_A Carveol dehydrogenase; 91.4 0.14 4.9E-06 48.1 4.2 36 90-126 7-43 (287)
445 3ksu_A 3-oxoacyl-acyl carrier 91.4 0.21 7.1E-06 46.6 5.3 35 90-125 8-43 (262)
446 3s55_A Putative short-chain de 91.4 0.19 6.4E-06 47.3 5.0 38 88-126 5-43 (281)
447 3q2i_A Dehydrogenase; rossmann 91.4 0.25 8.6E-06 48.3 6.1 88 93-190 13-104 (354)
448 3sc4_A Short chain dehydrogena 91.4 0.35 1.2E-05 45.6 7.0 39 90-129 6-45 (285)
449 2y0c_A BCEC, UDP-glucose dehyd 91.4 0.32 1.1E-05 49.9 7.1 34 93-127 8-41 (478)
450 1y8q_B Anthracycline-, ubiquit 91.3 0.15 5.2E-06 54.0 4.6 63 230-292 384-448 (640)
451 4b8w_A GDP-L-fucose synthase; 91.3 0.37 1.3E-05 45.2 7.1 27 91-117 4-31 (319)
452 2ekl_A D-3-phosphoglycerate de 91.3 0.089 3E-06 51.0 2.7 92 89-193 138-233 (313)
453 2pnf_A 3-oxoacyl-[acyl-carrier 91.3 0.14 4.6E-06 46.9 3.8 36 90-126 4-40 (248)
454 3oh8_A Nucleoside-diphosphate 91.3 0.74 2.5E-05 47.4 9.8 92 93-198 147-259 (516)
455 3ai3_A NADPH-sorbose reductase 91.2 0.17 5.8E-06 47.0 4.5 35 91-126 5-40 (263)
456 3e9m_A Oxidoreductase, GFO/IDH 91.2 0.14 4.9E-06 49.6 4.1 90 92-190 4-96 (330)
457 3fi9_A Malate dehydrogenase; s 91.2 0.15 5.2E-06 50.0 4.3 75 91-171 6-87 (343)
458 2yy7_A L-threonine dehydrogena 91.2 0.36 1.2E-05 45.6 6.9 96 93-195 2-120 (312)
459 2hq1_A Glucose/ribitol dehydro 91.2 0.21 7.1E-06 45.7 5.0 33 91-124 3-36 (247)
460 1gee_A Glucose 1-dehydrogenase 91.2 0.21 7.1E-06 46.2 5.0 35 90-125 4-39 (261)
461 3d3w_A L-xylulose reductase; u 91.2 0.23 7.9E-06 45.3 5.3 36 90-126 4-40 (244)
462 3gvc_A Oxidoreductase, probabl 91.1 0.18 6.3E-06 47.5 4.7 37 89-126 25-62 (277)
463 3tjr_A Short chain dehydrogena 91.1 0.24 8.2E-06 47.3 5.6 79 90-169 28-117 (301)
464 3m2t_A Probable dehydrogenase; 91.1 0.26 8.9E-06 48.4 5.9 90 92-190 4-97 (359)
465 3dje_A Fructosyl amine: oxygen 91.1 0.18 6.2E-06 50.5 4.9 37 93-129 6-42 (438)
466 3sju_A Keto reductase; short-c 91.1 0.24 8.4E-06 46.6 5.5 37 89-126 20-57 (279)
467 1rjw_A ADH-HT, alcohol dehydro 91.1 0.079 2.7E-06 51.6 2.1 76 92-173 164-243 (339)
468 1cyd_A Carbonyl reductase; sho 91.1 0.24 8.4E-06 45.1 5.4 36 90-126 4-40 (244)
469 4eso_A Putative oxidoreductase 91.0 0.23 8E-06 46.1 5.3 36 90-126 5-41 (255)
470 3tfo_A Putative 3-oxoacyl-(acy 91.0 0.21 7.2E-06 46.8 5.0 77 91-168 2-89 (264)
471 2x0j_A Malate dehydrogenase; o 91.0 0.15 5E-06 49.0 3.9 70 95-171 2-80 (294)
472 1cdo_A Alcohol dehydrogenase; 91.0 0.12 4E-06 51.0 3.3 35 92-126 192-226 (374)
473 4e6p_A Probable sorbitol dehyd 91.0 0.17 6E-06 46.9 4.3 36 90-126 5-41 (259)
474 3pgx_A Carveol dehydrogenase; 91.0 0.31 1E-05 45.8 6.1 36 90-126 12-48 (280)
475 3rwb_A TPLDH, pyridoxal 4-dehy 91.0 0.2 6.8E-06 46.3 4.6 36 90-126 3-39 (247)
476 2ae2_A Protein (tropinone redu 90.9 0.29 9.8E-06 45.4 5.8 36 90-126 6-42 (260)
477 1f0y_A HCDH, L-3-hydroxyacyl-C 90.9 0.16 5.5E-06 48.5 4.1 33 94-127 16-48 (302)
478 3o26_A Salutaridine reductase; 90.9 0.22 7.6E-06 47.0 5.1 37 90-127 9-46 (311)
479 4e12_A Diketoreductase; oxidor 90.9 0.17 5.7E-06 48.0 4.1 33 94-127 5-37 (283)
480 4dyv_A Short-chain dehydrogena 90.9 0.19 6.6E-06 47.3 4.6 37 90-127 25-62 (272)
481 3tzq_B Short-chain type dehydr 90.9 0.29 1E-05 45.8 5.8 37 90-127 8-45 (271)
482 1xu9_A Corticosteroid 11-beta- 90.9 0.26 9E-06 46.4 5.5 37 90-127 25-62 (286)
483 3ond_A Adenosylhomocysteinase; 90.9 0.16 5.4E-06 52.1 4.1 71 90-172 262-332 (488)
484 1e3j_A NADP(H)-dependent ketos 90.8 0.2 6.9E-06 48.9 4.8 34 92-126 168-201 (352)
485 4ibo_A Gluconate dehydrogenase 90.8 0.15 5.1E-06 48.0 3.7 36 90-126 23-59 (271)
486 2fzw_A Alcohol dehydrogenase c 90.8 0.13 4.4E-06 50.7 3.3 35 92-126 190-224 (373)
487 3s2e_A Zinc-containing alcohol 90.8 0.11 3.9E-06 50.4 2.9 77 92-174 166-246 (340)
488 3ek2_A Enoyl-(acyl-carrier-pro 90.8 0.16 5.5E-06 47.2 3.9 39 87-126 8-49 (271)
489 1yxm_A Pecra, peroxisomal tran 90.8 0.24 8.1E-06 47.0 5.2 79 90-169 15-109 (303)
490 3db2_A Putative NADPH-dependen 90.8 0.13 4.6E-06 50.3 3.5 88 93-190 5-95 (354)
491 2ywl_A Thioredoxin reductase r 90.8 0.2 7E-06 43.4 4.3 33 94-127 2-34 (180)
492 3hdj_A Probable ornithine cycl 90.7 0.1 3.4E-06 50.6 2.4 70 92-170 120-193 (313)
493 3tpc_A Short chain alcohol deh 90.7 0.41 1.4E-05 44.3 6.6 36 90-126 4-40 (257)
494 3pqe_A L-LDH, L-lactate dehydr 90.6 0.18 6.2E-06 49.1 4.2 71 93-171 5-84 (326)
495 1c0p_A D-amino acid oxidase; a 90.6 0.19 6.5E-06 48.9 4.4 36 93-129 6-41 (363)
496 3fef_A Putative glucosidase LP 90.6 0.37 1.3E-05 49.0 6.6 89 92-186 4-103 (450)
497 4hkt_A Inositol 2-dehydrogenas 90.6 0.16 5.5E-06 49.1 3.8 86 94-190 4-92 (331)
498 3oig_A Enoyl-[acyl-carrier-pro 90.6 0.46 1.6E-05 44.1 6.9 36 90-126 4-42 (266)
499 1hdc_A 3-alpha, 20 beta-hydrox 90.6 0.26 8.9E-06 45.6 5.1 36 90-126 2-38 (254)
500 1dlj_A UDP-glucose dehydrogena 90.5 0.32 1.1E-05 48.6 6.0 31 95-127 2-32 (402)
No 1
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=5.2e-49 Score=382.48 Aligned_cols=217 Identities=23% Similarity=0.423 Sum_probs=173.0
Q ss_pred hhhhccccCCCCCH-HHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---------------
Q 013384 72 YRYSRHLLLPSFGV-EGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--------------- 135 (444)
Q Consensus 72 ~ry~Rq~~l~~~g~-~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--------------- 135 (444)
--|+|||.|++||. ++|++|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.|||+|
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~a 93 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQA 93 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHH
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHH
Confidence 57999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred -------ccCcceEEEEeecCCc-ccHHhhc-----------CCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccC-
Q 013384 136 -------INSTVHIIEHREALRT-SNALEIL-----------SQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALG- 195 (444)
Q Consensus 136 -------lnp~~~v~~~~~~~~~-~~~~~~~-----------~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g- 195 (444)
+||+++|+.+...++. ++..+++ +++|+||||+||+++|++||++|++.++|||++++.+
T Consensus 94 a~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~~ 173 (292)
T 3h8v_A 94 AEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN 173 (292)
T ss_dssp HHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECTT
T ss_pred HHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeecc
Confidence 8999999999999986 5555554 6899999999999999999999999999999998875
Q ss_pred -CcceEEEEeCCCCCceeecCCCCCCCc-cCCcccCCCc----ccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecC
Q 013384 196 -LEGQLTVYNYNGGPCYRCLFPTPPPTT-ACQRCADSGV----LGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDAL 269 (444)
Q Consensus 196 -~~G~l~~~~~~~~~C~~C~~~~~~~~~-~~~~c~~~~~----~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~ 269 (444)
+.||+.++.|+.+|||+|+||..++.. ....|...|+ ++|+++++|+|||.||||+|+|.+++ ++++.||+.
T Consensus 174 ~~~Gqv~~~~pg~t~Cy~Cl~p~~~~~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~L~g~g~~--~~ll~~D~~ 251 (292)
T 3h8v_A 174 AVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTV--SFYLGYNAM 251 (292)
T ss_dssp SSEEEEEEECTTTSCCTTSSSCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--CSEEEEETT
T ss_pred eeEEEEEEECCCCCCCHhhcCCccccccccccchhhcCcccCCcchHHHHHHHHHHHHHHHHHhCCCCC--CeEEEEECC
Confidence 899999999999999999999765432 2356777776 89999999999999999999999876 789999999
Q ss_pred CCeEEEEEeeccCCCCC--ccCCC
Q 013384 270 SARIRIVKIRGRSSQCE--ACGEN 291 (444)
Q Consensus 270 ~~~~~~~~~~~r~~~C~--~Cg~~ 291 (444)
+++|++++++ |+|+|| +||++
T Consensus 252 ~~~~~~~~~~-~~p~C~~~~Cg~~ 274 (292)
T 3h8v_A 252 QDFFPTMSMK-PNPQCDDRNCRKQ 274 (292)
T ss_dssp TTBCCEECCC-CCTTCSCHHHHHH
T ss_pred CCcEEEEecC-CCcCcCccccCCc
Confidence 9999999998 999999 99964
No 2
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=3.1e-48 Score=371.86 Aligned_cols=223 Identities=40% Similarity=0.741 Sum_probs=201.3
Q ss_pred CCHHHHhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----------
Q 013384 66 LSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR---------- 135 (444)
Q Consensus 66 l~~~~~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R---------- 135 (444)
||++|.+||+||+++++||.++|++|++++|+|||+||+|++++++|+++|||+|+|+|.|.|+.+||+|
T Consensus 1 l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 1 MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp CCHHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred CCHHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCC
Confidence 6889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------------ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEEE
Q 013384 136 -------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTV 202 (444)
Q Consensus 136 -------------lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~ 202 (444)
+||.++++.+...++.++..++++++|+||+|+|++++|.+||++|++.++|||++++.|+.|++.+
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMV 160 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEE
Confidence 6999999999988888888889999999999999999999999999999999999999999999999
Q ss_pred EeCCC-CCceeecCCCCCCCccCCcccCCCcccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEEEeecc
Q 013384 203 YNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIVKIRGR 281 (444)
Q Consensus 203 ~~~~~-~~C~~C~~~~~~~~~~~~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~~~~~~~~~~~~r 281 (444)
+.|+. ++||+|+|+..+.. ...|...|+++|+++++|+++|.|++|+|+|.+.+. ++++.||+.+++++.+++. |
T Consensus 161 ~~p~~~~~c~~cl~~~~~~~--~~~~~~~g~~~p~~~~~g~~~A~e~lk~l~g~~~~~-~~~~~~d~~~~~~~~~~~~-~ 236 (251)
T 1zud_1 161 LTPPWEQGCYRCLWPDNQEP--ERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPA-GELRLFDGKSSQWRSLALR-R 236 (251)
T ss_dssp ECTTCTTCCHHHHCC-------------CCBCHHHHHHHHHHHHHHHHHHHHTCCCCC-SEEEEEETTTTEEEEEECC-C
T ss_pred EccCCCCCcEEEeCCCCCCC--CCccccCCchHHHHHHHHHHHHHHHHHHHhCCCCcC-CcEEEEECCCCEEEEEecC-C
Confidence 98876 79999999875543 257888999999999999999999999999998775 8999999999999999998 9
Q ss_pred CCCCCccCCCC
Q 013384 282 SSQCEACGENS 292 (444)
Q Consensus 282 ~~~C~~Cg~~~ 292 (444)
+|+||+||..+
T Consensus 237 ~p~C~~C~~~~ 247 (251)
T 1zud_1 237 ASGCPVCGGSN 247 (251)
T ss_dssp CTTCTTTCC--
T ss_pred CcCCCccCCCC
Confidence 99999999753
No 3
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=100.00 E-value=3.2e-47 Score=364.54 Aligned_cols=223 Identities=39% Similarity=0.753 Sum_probs=204.4
Q ss_pred CCCHHHHhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---------
Q 013384 65 GLSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--------- 135 (444)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--------- 135 (444)
.|+++|++||+||+++++||.++|++|++++|+|||+||+|++++++|+++|||+|+|+|.|.|+++||+|
T Consensus 3 ~l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~di 82 (249)
T 1jw9_B 3 ELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATV 82 (249)
T ss_dssp CCCHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGT
T ss_pred CCCHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEE
Q 013384 136 --------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 201 (444)
Q Consensus 136 --------------lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~ 201 (444)
+||.++++.+...++.++..++++++|+||+|+|++++|.+++++|++.++|+|++++.|+.|++.
T Consensus 83 G~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~ 162 (249)
T 1jw9_B 83 GQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQIT 162 (249)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEE
T ss_pred CcHHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEE
Confidence 689999999998888777788899999999999999999999999999999999999999999999
Q ss_pred EEeCCC-CCceeecCCCCCCCccCCcccCCCcccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEEEeec
Q 013384 202 VYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIVKIRG 280 (444)
Q Consensus 202 ~~~~~~-~~C~~C~~~~~~~~~~~~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~~~~~~~~~~~~ 280 (444)
++.|+. ++||+|+|+..++. ..+|...|+++|+++++|+++|.|++|+|+|.++++.++++.||+.+.+++.+++.
T Consensus 163 ~~~p~~~~~c~~c~~~~~~~~--~~~c~~~g~~~~~~~~~g~~~a~e~lk~l~g~~~~~~~~~~~~d~~~~~~~~~~~~- 239 (249)
T 1jw9_B 163 VFTYQDGEPCYRCLSRLFGEN--ALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQFREMKLM- 239 (249)
T ss_dssp EECCCTTCCCTHHHHTTCCC---------CCBCHHHHHHHHHHHHHHHHHHHHTCSCCCBSEEEEEETTTTEEEEEECC-
T ss_pred EEeCCCCCCceEEECCCCCcc--cccccccCCcchHHHHHHHHHHHHHHHHHhCCCCCccCeEEEEECCCCEEEEEecC-
Confidence 998876 79999999875532 34799999999999999999999999999999888889999999999999999998
Q ss_pred cCCCCCccCC
Q 013384 281 RSSQCEACGE 290 (444)
Q Consensus 281 r~~~C~~Cg~ 290 (444)
|+|+||+||+
T Consensus 240 ~~~~C~~C~~ 249 (249)
T 1jw9_B 240 RNPGCEVCGQ 249 (249)
T ss_dssp CCTTCTTTC-
T ss_pred CCcCCCCcCc
Confidence 9999999984
No 4
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=100.00 E-value=2.3e-45 Score=368.07 Aligned_cols=224 Identities=21% Similarity=0.340 Sum_probs=196.6
Q ss_pred CCHHHHhhhhccccC-CCCC--HHH-HHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc------
Q 013384 66 LSPDMIYRYSRHLLL-PSFG--VEG-QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR------ 135 (444)
Q Consensus 66 l~~~~~~ry~Rq~~l-~~~g--~~~-q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R------ 135 (444)
++.++.+||+||+.+ +.|| .++ |++|++++|+|||+||+|++++++|+++|||+|+|+|.|.|+.+||+|
T Consensus 87 ~~~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 87 NNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp GCSCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCG
T ss_pred CCHHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCCh
Confidence 567788999999863 2255 566 999999999999999999999999999999999999999999999999
Q ss_pred -----------------ccCcceEEEEeecCCccc-HHhhcCCCcEEEEccCChH-hHHHHHHHHHHcCCcEEEEcccCC
Q 013384 136 -----------------INSTVHIIEHREALRTSN-ALEILSQYEIVVDATDNAP-SRYMISDCCVVLGKPLVSGAALGL 196 (444)
Q Consensus 136 -----------------lnp~~~v~~~~~~~~~~~-~~~~~~~~DvVi~~~D~~~-~r~~i~~~~~~~~~p~i~~~~~g~ 196 (444)
+||+++++.+...++.++ ..+ ++++|+||+|+|++. +|++||++|++.++|||++++.+.
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~ 245 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVND 245 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 799999999999998877 556 899999999999999 999999999999999999999999
Q ss_pred cceEEEEe-CCCCCceeecCCCC--CCCc---------cCCcccCCCcccchhHHHHHHHHHHHHHHHhcCCCCC-CCce
Q 013384 197 EGQLTVYN-YNGGPCYRCLFPTP--PPTT---------ACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPL-SGRM 263 (444)
Q Consensus 197 ~G~l~~~~-~~~~~C~~C~~~~~--~~~~---------~~~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~-~~~~ 263 (444)
.|++..+. |+.++||+|+|+.+ |... ..++|...|+++|+++++|+|+|.|++|+|+|.+++. .+++
T Consensus 246 ~g~~g~~~~p~~~~C~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~g~~~~~~~g~l 325 (353)
T 3h5n_A 246 IAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKR 325 (353)
T ss_dssp EEEEEEEECTTTSCCTTTTC---------CHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCTTBTEE
T ss_pred EEEEEEEEcCCCCCChhhcCCCcCCCccccchhhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhcCCCCcccCCeE
Confidence 99987764 88999999999843 2221 1235678999999999999999999999999988875 6999
Q ss_pred eEeecCCCeEEEEEeeccCCCCCccCCC
Q 013384 264 LLFDALSARIRIVKIRGRSSQCEACGEN 291 (444)
Q Consensus 264 ~~~d~~~~~~~~~~~~~r~~~C~~Cg~~ 291 (444)
+.||+.+.+++.+++. |+|+||+||++
T Consensus 326 ~~~d~~~~~~~~~~~~-~~p~C~~Cg~~ 352 (353)
T 3h5n_A 326 IGIWSDEIKIHSQNMG-RSPVCSVCGNR 352 (353)
T ss_dssp EEECSSSSCEEEEECC-CCTTCTTTC--
T ss_pred EEEECCCCEEEEEccC-CCcCCCCCCCC
Confidence 9999999999999998 99999999974
No 5
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=7.5e-41 Score=330.05 Aligned_cols=205 Identities=20% Similarity=0.264 Sum_probs=179.8
Q ss_pred CCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-----------------------ccCc
Q 013384 83 FGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INST 139 (444)
Q Consensus 83 ~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-----------------------lnp~ 139 (444)
|+..+|++|++++|+|||+||+||+++++|+++|||+|+|||+|.|+.|||+| +||.
T Consensus 24 l~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~ 103 (340)
T 3rui_A 24 LPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL 103 (340)
T ss_dssp CTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC
Confidence 44445779999999999999999999999999999999999999999999999 8999
Q ss_pred ceEEEEeecC---------------CcccHHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEEEEe
Q 013384 140 VHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYN 204 (444)
Q Consensus 140 ~~v~~~~~~~---------------~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~~~ 204 (444)
++++.+...+ +.++..++++++|+||+|+|++++|+++|++|+.+++|+|+++ .|+.||+.+++
T Consensus 104 v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l~v~~ 182 (340)
T 3rui_A 104 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMRH 182 (340)
T ss_dssp CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEEEEEC
T ss_pred CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEEEEee
Confidence 9999998654 2345678899999999999999999999999999999999975 99999998875
Q ss_pred -------CCCCCceeecCCCCCCCccC-----CcccCCCcccchhHHHHHHHHHHHHHHHhcCCCCC-----CCce-eEe
Q 013384 205 -------YNGGPCYRCLFPTPPPTTAC-----QRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPL-----SGRM-LLF 266 (444)
Q Consensus 205 -------~~~~~C~~C~~~~~~~~~~~-----~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~-----~~~~-~~~ 266 (444)
++.+|||+|.++..|..... ..|. +++|+++++|+++|.|+||+|+|.+.+. .|++ +.|
T Consensus 183 g~~~~~~~~~~~Cy~C~~~~~p~~~~~~~t~~~~c~---v~~p~vg~igs~qA~E~lk~l~~~~~~~~~~~~~G~l~~~~ 259 (340)
T 3rui_A 183 GNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMST---VTRPGVAMMASSLAVELMTSLLQTKYSGSETTVLGDIPHQI 259 (340)
T ss_dssp CCCCSSCCCCBCCGGGGSSSCCCCCTTTCCCGGGGG---CSCHHHHHHHHHHHHHHHHHHTSCCCTTSSEETTEECCSEE
T ss_pred cccccCCCCCCCeeeeCCCCCCcccccccccCCCcc---eecchHHHHHHHHHHHHHHHHhCCCCCccccCccCcccEEE
Confidence 35789999999876643321 3455 9999999999999999999999988654 4675 999
Q ss_pred ecCCCeEEEEEeec-cCCCCCccCCC
Q 013384 267 DALSARIRIVKIRG-RSSQCEACGEN 291 (444)
Q Consensus 267 d~~~~~~~~~~~~~-r~~~C~~Cg~~ 291 (444)
|++..+|+++++.+ ++|+|++||..
T Consensus 260 d~~~~~f~~~~l~~~~~~~C~~C~~~ 285 (340)
T 3rui_A 260 RGFLHNFSILKLETPAYEHCPACSPK 285 (340)
T ss_dssp EEETTTTEEEEECCBCCTTCTTTCHH
T ss_pred ecCcCCceEEEecCCCCCCCCCCCHH
Confidence 99999999999984 68999999973
No 6
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=100.00 E-value=2.6e-39 Score=338.15 Aligned_cols=220 Identities=21% Similarity=0.277 Sum_probs=189.8
Q ss_pred CCHHHHhhhhccc-------cCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---
Q 013384 66 LSPDMIYRYSRHL-------LLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--- 135 (444)
Q Consensus 66 l~~~~~~ry~Rq~-------~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--- 135 (444)
|.+.++.++++++ ++ |+..+|++|++++|+|||+||+||++|++|+++|||+|+|||+|.|+.|||+|
T Consensus 294 ~dp~~la~~~~~Lnlklm~wRl--lp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L 371 (615)
T 4gsl_A 294 LDPLKIADQSVDLNLKLMKWRI--LPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQAL 371 (615)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHT--CTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTT
T ss_pred CCHHHHHhhhhhhhhHHHHHhh--cchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccC
Confidence 5677788888777 23 45556789999999999999999999999999999999999999999999999
Q ss_pred --------------------ccCcceEEEEeecC---------------CcccHHhhcCCCcEEEEccCChHhHHHHHHH
Q 013384 136 --------------------INSTVHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDC 180 (444)
Q Consensus 136 --------------------lnp~~~v~~~~~~~---------------~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~ 180 (444)
+||.++++.+...+ +.++..++++++|+||+|+|++++|+++|++
T Consensus 372 ~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~ 451 (615)
T 4gsl_A 372 YNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLL 451 (615)
T ss_dssp CCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHH
T ss_pred CChhhcChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHH
Confidence 89999999998644 3345678889999999999999999999999
Q ss_pred HHHcCCcEEEEcccCCcceEEEEe-------CCCCCceeecCCCCCCCcc-----CCcccCCCcccchhHHHHHHHHHHH
Q 013384 181 CVVLGKPLVSGAALGLEGQLTVYN-------YNGGPCYRCLFPTPPPTTA-----CQRCADSGVLGVVPGIIGCLQALEA 248 (444)
Q Consensus 181 ~~~~~~p~i~~~~~g~~G~l~~~~-------~~~~~C~~C~~~~~~~~~~-----~~~c~~~~~~~~~~~i~g~l~a~e~ 248 (444)
|+..++|+|+++ .|+.||+.+++ ++.+|||+|.++..|.... ...|. +++|+++++|+++|+|+
T Consensus 452 c~~~~~PlI~aa-lG~~Gql~v~~g~~~~~~~~~~~CY~Cl~~~~P~~~~~~rtl~~~C~---Vl~P~vgiigs~qA~Ea 527 (615)
T 4gsl_A 452 SNIENKTVINAA-LGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCT---VTRPGVAMMASSLAVEL 527 (615)
T ss_dssp HHHTTCEEEEEE-ECSSEEEEEECCC------CCCCCTTTSCSSCTTSCTTTTTTTCTTC---CCCHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEE-ccceeEEEEeecccccCCCCCCCceeeCCCCCCcccccccccccCcc---eecchHHHHHHHHHHHH
Confidence 999999999975 99999998864 3578999999876654321 13465 99999999999999999
Q ss_pred HHHHhcCCCCC-----CCce-eEeecCCCeEEEEEeec-cCCCCCccCCC
Q 013384 249 IKVASAVGEPL-----SGRM-LLFDALSARIRIVKIRG-RSSQCEACGEN 291 (444)
Q Consensus 249 lk~l~g~~~~~-----~~~~-~~~d~~~~~~~~~~~~~-r~~~C~~Cg~~ 291 (444)
||+|+|.+.+. .|++ +.||+...+|+++++.. ++|+|++||+.
T Consensus 528 Lk~Ll~~g~~~~~~~~~G~l~~~~dg~~~~f~~~~l~~~~~p~C~~C~~~ 577 (615)
T 4gsl_A 528 MTSLLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPK 577 (615)
T ss_dssp HHHHHSCCCTTSSEETTEECCSEEEEETTTTEEEEECCCCCTTCTTTCHH
T ss_pred HHHHhCCCCcccCcCcCCCCcEEEeccCCcceEEeccCCCCCCCCCCCHH
Confidence 99999987553 4665 89999999999999985 58999999973
No 7
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=6.6e-39 Score=328.02 Aligned_cols=206 Identities=25% Similarity=0.442 Sum_probs=177.9
Q ss_pred CHHHHH-hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-----------------------ccCc
Q 013384 84 GVEGQS-NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INST 139 (444)
Q Consensus 84 g~~~q~-~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-----------------------lnp~ 139 (444)
|.+.|+ .|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.|||+| +||+
T Consensus 30 g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~ 109 (434)
T 1tt5_B 30 STESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN 109 (434)
T ss_dssp CSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC
Confidence 445554 5699999999999999999999999999999999999999999999 7999
Q ss_pred ceEEEEeecCCcccHHhhcCCCcEEEEccCChHhHHHHHHHHHHc------------CCcEEEEcccCCcceEEEEeCCC
Q 013384 140 VHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVL------------GKPLVSGAALGLEGQLTVYNYNG 207 (444)
Q Consensus 140 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~------------~~p~i~~~~~g~~G~l~~~~~~~ 207 (444)
++++.+...++..+ .++++++|+||+|+|++++|++||++|+.. ++|+|++++.|+.|++.++.|+.
T Consensus 110 v~v~~~~~~i~~~~-~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~ 188 (434)
T 1tt5_B 110 CNVVPHFNKIQDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM 188 (434)
T ss_dssp CCCEEEESCGGGBC-HHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEEEECTTT
T ss_pred CEEEEEecccchhh-HHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEEEECCCC
Confidence 99999999888665 588999999999999999999999999874 99999999999999999999988
Q ss_pred CCceeecCCCCCCCccCCccc----------------------------------------------------CCC----
Q 013384 208 GPCYRCLFPTPPPTTACQRCA----------------------------------------------------DSG---- 231 (444)
Q Consensus 208 ~~C~~C~~~~~~~~~~~~~c~----------------------------------------------------~~~---- 231 (444)
++||+|.++..|+....+.|. ..|
T Consensus 189 t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i~~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi~~~ 268 (434)
T 1tt5_B 189 TACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGV 268 (434)
T ss_dssp SCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHHHHhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCCCcc
Confidence 999999987655443333331 122
Q ss_pred --------------cccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCe-EEEEEeeccCCCCCccCCCC
Q 013384 232 --------------VLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSAR-IRIVKIRGRSSQCEACGENS 292 (444)
Q Consensus 232 --------------~~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~~~~-~~~~~~~~r~~~C~~Cg~~~ 292 (444)
.++|+++++|+++|+|++|+|+|.++++.+ ++.||..... ++.+++. |+|+||+||..+
T Consensus 269 ~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~~-~l~~d~~~~~~~~~~~~~-~~~~C~vC~~~~ 342 (434)
T 1tt5_B 269 TYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFNDVDGLYTYTFEAE-RKENCPACSQLP 342 (434)
T ss_dssp CHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCCS-EEEEECSBSCEEEEECCC-CCTTCTTTCSSC
T ss_pred CHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccCc-eEEEEcCCCceeEEEecc-CCCCCCccCCCC
Confidence 246788999999999999999999888755 7789998877 5677776 899999999754
No 8
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=100.00 E-value=1.7e-38 Score=332.07 Aligned_cols=226 Identities=20% Similarity=0.244 Sum_probs=187.9
Q ss_pred CCCHHHHhhhhccccCC--C---CCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----
Q 013384 65 GLSPDMIYRYSRHLLLP--S---FGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR---- 135 (444)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~--~---~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R---- 135 (444)
.|++.++.+|+||++|. . ++..+|++|++++|+|||+||+||++|++|+++|||+|+|||+|.|+.|||+|
T Consensus 294 ~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~ 373 (598)
T 3vh1_A 294 LLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALY 373 (598)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTC
T ss_pred ccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccccccccc
Confidence 37888999999998752 1 33446899999999999999999999999999999999999999999999999
Q ss_pred -------------------ccCcceEEEEeecC---------------CcccHHhhcCCCcEEEEccCChHhHHHHHHHH
Q 013384 136 -------------------INSTVHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDCC 181 (444)
Q Consensus 136 -------------------lnp~~~v~~~~~~~---------------~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~ 181 (444)
+||.++++.+...+ +.++..++++++|+||+|+|++++|+++|++|
T Consensus 374 ~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c 453 (598)
T 3vh1_A 374 NFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLS 453 (598)
T ss_dssp CSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHH
T ss_pred chhhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 79999999998764 23456778899999999999999999999999
Q ss_pred HHcCCcEEEEcccCCcceEEEEeC-------CCCCceeecCCCCCCCccC-Cc-ccCCCcccchhHHHHHHHHHHHHHHH
Q 013384 182 VVLGKPLVSGAALGLEGQLTVYNY-------NGGPCYRCLFPTPPPTTAC-QR-CADSGVLGVVPGIIGCLQALEAIKVA 252 (444)
Q Consensus 182 ~~~~~p~i~~~~~g~~G~l~~~~~-------~~~~C~~C~~~~~~~~~~~-~~-c~~~~~~~~~~~i~g~l~a~e~lk~l 252 (444)
+..++|+|++ +.|+.|++.++.+ +.++||+|.++..|..... .. +..-++++|+++++|+++|.|+||+|
T Consensus 454 ~~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl~~~~p~~~~~~~tld~~C~Vl~p~vgvigslqA~Ealk~L 532 (598)
T 3vh1_A 454 NIENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSL 532 (598)
T ss_dssp HHTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTSCSSCSSSCTTTTTTTBSCCCSCTHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeecCccCCCccccccccCCCCCccCcHHHHHHHHHHHHHHHHH
Confidence 9999999996 6899999988752 3579999998776543221 11 11225899999999999999999999
Q ss_pred hcCCC-----CCCCce-eEeecCCCeEEEEEee-ccCCCCCccCCC
Q 013384 253 SAVGE-----PLSGRM-LLFDALSARIRIVKIR-GRSSQCEACGEN 291 (444)
Q Consensus 253 ~g~~~-----~~~~~~-~~~d~~~~~~~~~~~~-~r~~~C~~Cg~~ 291 (444)
+|.+. +..+.+ ..+++....|+.++++ .|+|+|++||..
T Consensus 533 lg~~~ap~~~~~~g~l~~~l~g~l~~f~~~~l~~~r~~~C~~Cg~~ 578 (598)
T 3vh1_A 533 LQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPK 578 (598)
T ss_dssp HSCCCSSSSEETTEECCSEEEEETTTTEEEEECCBCCTTCTTTSHH
T ss_pred hCCCcccccccccccccceeecccccceeEeccCCCCCCCCCCchH
Confidence 99876 444544 5678777778888865 389999999963
No 9
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=3.5e-36 Score=332.60 Aligned_cols=207 Identities=25% Similarity=0.428 Sum_probs=182.0
Q ss_pred CCHHHHHhh-hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-----------------------ccC
Q 013384 83 FGVEGQSNL-LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INS 138 (444)
Q Consensus 83 ~g~~~q~~L-~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-----------------------lnp 138 (444)
+|.++|+++ ++++|+|||+||+||+++++|+++|||+|+|||.|.|+.|||+| +||
T Consensus 400 ~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np 479 (805)
T 2nvu_B 400 PSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP 479 (805)
T ss_dssp CCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC
Confidence 799999987 99999999999999999999999999999999999999999999 899
Q ss_pred cceEEEEeecCCcccHHhhcCCCcEEEEccCChHhHHHHHHHHHH------------cCCcEEEEcccCCcceEEEEeCC
Q 013384 139 TVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVV------------LGKPLVSGAALGLEGQLTVYNYN 206 (444)
Q Consensus 139 ~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~------------~~~p~i~~~~~g~~G~l~~~~~~ 206 (444)
.++|+.+...++..+ .++++++|+||+|+|++++|++||++|+. .++|+|++++.|+.|++.++.|+
T Consensus 480 ~~~v~~~~~~~~~~~-~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~~~~p~ 558 (805)
T 2nvu_B 480 NCNVVPHFNKIQDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPG 558 (805)
T ss_dssp TCEEEEEESCGGGSC-HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEEEECTT
T ss_pred CCEEEEEeccccccH-HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEEEECCC
Confidence 999999999988766 58889999999999999999999999987 49999999999999999999999
Q ss_pred CCCceeecCCCCCCCccCCccc----------------------------------------------------CCCc--
Q 013384 207 GGPCYRCLFPTPPPTTACQRCA----------------------------------------------------DSGV-- 232 (444)
Q Consensus 207 ~~~C~~C~~~~~~~~~~~~~c~----------------------------------------------------~~~~-- 232 (444)
.++||+|.++..|+....+.|. ..|+
T Consensus 559 ~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~gi~~ 638 (805)
T 2nvu_B 559 MTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRG 638 (805)
T ss_dssp TSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHHCTTSTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHhhcccccCCCCcccCCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 8999999987555433333331 2232
Q ss_pred ----------------ccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCe-EEEEEeeccCCCCCccCCCC
Q 013384 233 ----------------LGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSAR-IRIVKIRGRSSQCEACGENS 292 (444)
Q Consensus 233 ----------------~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~~~~-~~~~~~~~r~~~C~~Cg~~~ 292 (444)
++|+++++|+++|+|++|+|+|.++++.+ ++.||+.... ++.+++. |+|+||+||..+
T Consensus 639 ~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~C~~C~~~~ 713 (805)
T 2nvu_B 639 VTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFNDVDGLYTYTFEAE-RKENCPACSQLP 713 (805)
T ss_dssp CCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCS-EEEEECSBSCEEEEECCC-CCTTCTTTSCCC
T ss_pred cCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCc-eEEecCCCCcccccccCC-CCCCCCeeCcee
Confidence 46788999999999999999999888766 7789998877 5677776 899999999754
No 10
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=4.7e-36 Score=299.76 Aligned_cols=208 Identities=20% Similarity=0.310 Sum_probs=179.7
Q ss_pred CCCHHHHhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---------
Q 013384 65 GLSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--------- 135 (444)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--------- 135 (444)
.|+.+|.+||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|||+|+|+|+|.|+.+||+|
T Consensus 10 ~l~~~~~~rY~Rq~~l--~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~di 87 (346)
T 1y8q_A 10 GISEEEAAQYDRQIRL--WGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSV 87 (346)
T ss_dssp CCCHHHHHHHHHHHHH--HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCT
T ss_pred cCCHHHHHHHHHHHHh--hCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccC
Confidence 6999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred --------------ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEE
Q 013384 136 --------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 201 (444)
Q Consensus 136 --------------lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~ 201 (444)
+||.++++.+...++. +..++++++|+||+|+|+.++|++||++|+.+++|+|++++.|+.|++.
T Consensus 88 G~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~-~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~ 166 (346)
T 1y8q_A 88 GRNRAEASLERAQNLNPMVDVKVDTEDIEK-KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTF 166 (346)
T ss_dssp TSBHHHHHHHHHHHTCTTSEEEEECSCGGG-CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEE
T ss_pred cCCHHHHHHHHHHhHCCCeEEEEEecccCc-chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEE
Confidence 7999999999988765 5578899999999999999999999999999999999999999999997
Q ss_pred EEeCCCCCceeec-------------------------------------------------------------------
Q 013384 202 VYNYNGGPCYRCL------------------------------------------------------------------- 214 (444)
Q Consensus 202 ~~~~~~~~C~~C~------------------------------------------------------------------- 214 (444)
+..+ ..+|+.|.
T Consensus 167 ~d~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~a 245 (346)
T 1y8q_A 167 ANLG-EHEFVEEKTKVAKVSQGVEDGPDTKRAKLDSSETTMVKKKVVFCPVKEALEVDWSSEKAKAALKRTTSDYFLLQV 245 (346)
T ss_dssp EECS-EEEEEEECC-----------------------CCCEEEEEEECCCHHHHTSCCSCSHHHHHHHTTSCTHHHHHHH
T ss_pred EecC-CCCEEEcCCCCcCCCcccccCCCCCcccccCCceEEEeceeeccCHHHHhcCCchhhhhhhhcccccHHHHHHHH
Confidence 6542 34444432
Q ss_pred -------CCCCCCCcc------------------------------CCcccCCCcccchhHHHHHHHHHHHHHHHhcCCC
Q 013384 215 -------FPTPPPTTA------------------------------CQRCADSGVLGVVPGIIGCLQALEAIKVASAVGE 257 (444)
Q Consensus 215 -------~~~~~~~~~------------------------------~~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~ 257 (444)
+...|.+.. ...+ .+.++|+++++|+++|+|+||+++|...
T Consensus 246 l~~f~~~~~~~P~~~~~~~d~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~l~pv~AiiGGi~aQEviK~it~k~~ 323 (346)
T 1y8q_A 246 LLKFRTDKGRDPSSDTYEEDSELLLQIRNDVLDSLGISPDLLPEDFVRYC--FSEMAPVCAVVGGILAQEIVKALSQRDP 323 (346)
T ss_dssp HHHHHHHSSSCCCGGGHHHHHHHHHHHHHHHHHTTTCCGGGSCGGGGGSS--CSBCHHHHHHHHHHHHHHHHHHHHTBSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccCCHHHHHHh--cCCccHHHHHHHHHHHHHHHHHhcCCCc
Confidence 111110000 0011 5779999999999999999999999999
Q ss_pred CCCCceeEeecCCCeEEEEEee
Q 013384 258 PLSGRMLLFDALSARIRIVKIR 279 (444)
Q Consensus 258 ~~~~~~~~~d~~~~~~~~~~~~ 279 (444)
|+.| ++.||+.......+++.
T Consensus 324 Pl~n-~~~fD~~~~~~~~~~l~ 344 (346)
T 1y8q_A 324 PHNN-FFFFDGMKGNGIVECLG 344 (346)
T ss_dssp CCCS-EEEEETTTTEEEEECCC
T ss_pred cccc-EEEEEccccceeEEecC
Confidence 9866 99999999988887775
No 11
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=4.4e-35 Score=307.07 Aligned_cols=184 Identities=21% Similarity=0.214 Sum_probs=165.9
Q ss_pred HHHhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-------------
Q 013384 69 DMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR------------- 135 (444)
Q Consensus 69 ~~~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R------------- 135 (444)
++.+||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.+||+|
T Consensus 10 d~~~rY~Rqi~l--~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 10 LKEQKYDRQLRL--WGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHTHHHHHH--HHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cHHHHhhHHHHh--cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 346899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred ----------ccCcceEEEEeecCCc--ccHHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEEEE
Q 013384 136 ----------INSTVHIIEHREALRT--SNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVY 203 (444)
Q Consensus 136 ----------lnp~~~v~~~~~~~~~--~~~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~~ 203 (444)
+||+++++.+...++. ++..+++++||+||+|+|++++|+.||++|+..++|+|++++.|+.|++.++
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~ 167 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRII 167 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEE
Confidence 8999999999887764 4567889999999999999999999999999999999999999999999987
Q ss_pred eC----------CCCCceeecCCCCCCCccCCccc----CCCcccchhHHHHHHHHHHHHHHHhc
Q 013384 204 NY----------NGGPCYRCLFPTPPPTTACQRCA----DSGVLGVVPGIIGCLQALEAIKVASA 254 (444)
Q Consensus 204 ~~----------~~~~C~~C~~~~~~~~~~~~~c~----~~~~~~~~~~i~g~l~a~e~lk~l~g 254 (444)
.| ..++||+|++|.++.+..+.+|. +.+++++++++++.++|+|++|.+++
T Consensus 168 ~p~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~~ 232 (531)
T 1tt5_A 168 IKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETN 232 (531)
T ss_dssp CSCEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTTC
T ss_pred cCCceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhcC
Confidence 65 24789999999887766666774 57899999999999999999998874
No 12
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.97 E-value=8.9e-31 Score=276.94 Aligned_cols=175 Identities=21% Similarity=0.338 Sum_probs=155.6
Q ss_pred cccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---------------------
Q 013384 77 HLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--------------------- 135 (444)
Q Consensus 77 q~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--------------------- 135 (444)
|+++ ||.++|++|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.|||+|
T Consensus 3 qi~l--~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L 80 (640)
T 1y8q_B 3 LSRG--LPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESV 80 (640)
T ss_dssp ---C--CCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred hhhh--cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHH
Confidence 7788 99999999999999999999999999999999999999999999999999999
Q ss_pred --ccCcceEEEEeecCCccc-HHhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCCcceEEEEeCCCCCcee
Q 013384 136 --INSTVHIIEHREALRTSN-ALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYR 212 (444)
Q Consensus 136 --lnp~~~v~~~~~~~~~~~-~~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~~~~~~~~C~~ 212 (444)
+||+++|+++...++..+ ..++++++|+||+|+|++.+|++||++|+.+++|+|++++.|+.|++.++.|+.++||+
T Consensus 81 ~~iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~Cy~ 160 (640)
T 1y8q_B 81 LQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYE 160 (640)
T ss_dssp HTTCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSCCTT
T ss_pred HHHCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCCCcc
Confidence 899999999999887654 46788999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCccCCcccCCCcccchhHHHHHHHHHHHHHHHhcCCC
Q 013384 213 CLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGE 257 (444)
Q Consensus 213 C~~~~~~~~~~~~~c~~~~~~~~~~~i~g~l~a~e~lk~l~g~~~ 257 (444)
|.+. |+....+.|...+.......++. .|.++++.|.|...
T Consensus 161 C~~~--p~~~~~p~Cti~~~p~~~~hci~--~a~~~f~~lf~~~~ 201 (640)
T 1y8q_B 161 CHPK--PTQRTFPGATIRNTPSEPIHCIV--WAKYLFNQLFGEED 201 (640)
T ss_dssp SSCC--CCCCCCCTTTTTSCCCSHHHHHH--HHHHHHHHHHSCCC
T ss_pred cCCC--CCCcccceeeecCCCCchHHHHH--HHHHHHHHHhCCcc
Confidence 9752 34456789998877766655555 67799999998753
No 13
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.4e-30 Score=286.17 Aligned_cols=154 Identities=25% Similarity=0.461 Sum_probs=143.3
Q ss_pred HhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCC-----CcEEEeeCCccccccccc----------
Q 013384 71 IYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGV-----GRLGIVDHDVVELNNMHR---------- 135 (444)
Q Consensus 71 ~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gv-----g~i~lvD~D~V~~sNl~R---------- 135 (444)
.+||+||+++ ||.++|++|++++|+||||||+||+++++|+++|| |+|+|||.|+|+.|||+|
T Consensus 405 ~~Ry~rq~~l--~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG 482 (1015)
T 3cmm_A 405 NSRYDNQIAV--FGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVG 482 (1015)
T ss_dssp SSTTHHHHHH--HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred hhhhhhHHHh--cCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCC
Confidence 4799999999 99999999999999999999999999999999999 999999999999999999
Q ss_pred -------------ccCcc--eEEEEeecCCcccH----HhhcCCCcEEEEccCChHhHHHHHHHHHHcCCcEEEEcccCC
Q 013384 136 -------------INSTV--HIIEHREALRTSNA----LEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGL 196 (444)
Q Consensus 136 -------------lnp~~--~v~~~~~~~~~~~~----~~~~~~~DvVi~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~ 196 (444)
+||.+ +|+++...+++++. .++++++|+||+|+|++++|++||++|+..++|+|++++.|+
T Consensus 483 ~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~ 562 (1015)
T 3cmm_A 483 KNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGT 562 (1015)
T ss_dssp SBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCcc
Confidence 89999 99999999987665 577899999999999999999999999999999999999999
Q ss_pred cceEEEEeCCCCCceeecCCCCCCCccCCccc
Q 013384 197 EGQLTVYNYNGGPCYRCLFPTPPPTTACQRCA 228 (444)
Q Consensus 197 ~G~l~~~~~~~~~C~~C~~~~~~~~~~~~~c~ 228 (444)
.|++.++.|+.++||+|. +. |+....+.|.
T Consensus 563 ~G~v~v~~p~~t~cy~c~-~d-p~~~~~P~Ct 592 (1015)
T 3cmm_A 563 KGNTQVIIPRLTESYSSS-RD-PPEKSIPLCT 592 (1015)
T ss_dssp EEEEEEECTTTBCCGGGS-CC-CCCCCCCHHH
T ss_pred ccceEEEeCCCCCccCCC-CC-CCCCCCCccc
Confidence 999999999999999998 33 3345667776
No 14
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.7e-27 Score=264.60 Aligned_cols=139 Identities=26% Similarity=0.376 Sum_probs=130.1
Q ss_pred HhhhhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc---------------
Q 013384 71 IYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--------------- 135 (444)
Q Consensus 71 ~~ry~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--------------- 135 (444)
.+||+||+++ ||.++|++|++++|+|||+||+|+++|++|+++|||+|+|+|+|.|+.+||+|
T Consensus 7 ~~rY~Rqi~l--~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~ 84 (1015)
T 3cmm_A 7 ESLYSRQLYV--LGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGD 84 (1015)
T ss_dssp HHHHHHHHHH--SCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHH
T ss_pred hHhccchHhh--cCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHH
Confidence 4799999999 99999999999999999999999999999999999999999999999999999
Q ss_pred --------ccCcceEEEEeecCCcccHHhhcCCCcEEEEccC-ChHhHHHHHHHHHHcCCcEEEEcccCCcceEEEEeCC
Q 013384 136 --------INSTVHIIEHREALRTSNALEILSQYEIVVDATD-NAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYN 206 (444)
Q Consensus 136 --------lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D-~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~~~~~ 206 (444)
+||.++|+.+...+++ +++++||+||+|+| +.++|+.||++|+.+++|+|++++.|+.|++.+.
T Consensus 85 a~~~~L~~lNP~v~v~~~~~~l~~----~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d--- 157 (1015)
T 3cmm_A 85 VTRAKLAELNAYVPVNVLDSLDDV----TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVD--- 157 (1015)
T ss_dssp HHHHHHTTSCTTSCEEECCCCCCS----TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEE---
T ss_pred HHHHHHHHHCCCCeEEEecCCCCH----HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEec---
Confidence 8999999999888764 47789999999999 9999999999999999999999999999998652
Q ss_pred CCCceeecCCCC
Q 013384 207 GGPCYRCLFPTP 218 (444)
Q Consensus 207 ~~~C~~C~~~~~ 218 (444)
.++||+|+++..
T Consensus 158 ~~~~~~c~~~~~ 169 (1015)
T 3cmm_A 158 LGDEFTVLDPTG 169 (1015)
T ss_dssp CCSCEEESBSSC
T ss_pred CCCceEEeeCCC
Confidence 368999998764
No 15
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.89 E-value=5.1e-24 Score=175.79 Aligned_cols=99 Identities=24% Similarity=0.472 Sum_probs=87.7
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 405 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G 405 (444)
+.||++|+++++.++++++|||||++.||+.||||||+|||++++.+.+.+++ ++++|||||++|
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~ivv~C~~G 66 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFN---------------KNEIYYIVCAGG 66 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCC---------------TTSEEEEECSSS
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhhhhc---------------CCCeEEEECCCC
Confidence 67999999999988778999999999999999999999999998877655543 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 406 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 406 ~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
.||..|++.|++.||++ +.+.||+.+|.+++.|.
T Consensus 67 ~rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pv 100 (103)
T 3iwh_A 67 VRSAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEI 100 (103)
T ss_dssp SHHHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHHHHcCCCE-EEecChHHHHHHCCCcc
Confidence 99999999999999965 57999999999997653
No 16
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=178.25 Aligned_cols=117 Identities=40% Similarity=0.747 Sum_probs=95.8
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHH----hhhhhhhcCCCCCCCCeEEEE
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSA----MKEKEEHRGSNASSGSNLYVV 401 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~----~~~~~~~~~~~~~~~~~Ivv~ 401 (444)
++||++|+.+++.++++++|||||++.||+.||||||+|||+..+.....++... +.... ...+.+++++||||
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~ivv~ 78 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEK--QGTQEGAAVPIYVI 78 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHH--TTC---CCEEEEEE
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhc--ccccCCCCCeEEEE
Confidence 4799999999998766689999999999999999999999999887664443222 22111 01122345699999
Q ss_pred cCCChhHHHHHHHHHHc------CCCCEEEccccHHHHhhCcCCCCCCC
Q 013384 402 CRRGNDSQRAVQALHKL------GFTSARDIIGGLESWANDVDPSFPVY 444 (444)
Q Consensus 402 C~~G~~S~~aa~~L~~~------G~~~v~~l~GG~~aW~~~~~p~~P~Y 444 (444)
|++|.+|..|++.|++. ||.+|++|.||+.+|.++++|+||.|
T Consensus 79 C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p~y 127 (127)
T 3i2v_A 79 CKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 127 (127)
T ss_dssp CSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSCCC
T ss_pred cCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCCCC
Confidence 99999999999999999 68899999999999999999999998
No 17
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.88 E-value=3.6e-23 Score=169.71 Aligned_cols=98 Identities=24% Similarity=0.494 Sum_probs=87.4
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 405 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G 405 (444)
+.|+++|+.+++.++++++|||||++.||..||||||+|+|+..+.+.+..++ ++++|||||++|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~ivvyC~~g 66 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFN---------------DNETYYIICKAG 66 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGSC---------------TTSEEEEECSSS
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhCC---------------CCCcEEEEcCCC
Confidence 57999999999966677999999999999999999999999998876555442 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 406 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 406 ~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
.+|..|++.|++.|| +|+++.||+.+|.+++.|
T Consensus 67 ~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (100)
T 3foj_A 67 GRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLE 99 (100)
T ss_dssp HHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred chHHHHHHHHHHCCC-CEEEecccHHHHHHcCCC
Confidence 999999999999999 999999999999998654
No 18
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.87 E-value=8.3e-23 Score=168.40 Aligned_cols=99 Identities=25% Similarity=0.478 Sum_probs=87.9
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 405 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G 405 (444)
++|+++|+.+++.++++.+|||||++.||..||||||+|||+..+...+..++ ++++|||||++|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~iv~yC~~g 66 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFN---------------KNEIYYIVCAGG 66 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCC---------------TTSEEEEECSSS
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhCC---------------CCCeEEEECCCC
Confidence 57999999998866567999999999999999999999999998876555442 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 406 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 406 ~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
.+|..|++.|++.|| +|+++.||+.+|.+++.|.
T Consensus 67 ~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~ 100 (103)
T 3eme_A 67 VRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEI 100 (103)
T ss_dssp SHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred hHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcC
Confidence 999999999999999 9999999999999887653
No 19
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=2.2e-22 Score=167.42 Aligned_cols=99 Identities=30% Similarity=0.519 Sum_probs=88.0
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 404 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~ 404 (444)
.+.|+++|+.+++.+ ++|||||++.||+.||||||+|||+..+.+.+..+. ++++|||||++
T Consensus 3 ~~~is~~el~~~l~~---~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~ivvyC~~ 64 (108)
T 3gk5_A 3 YRSINAADLYENIKA---YTVLDVREPFELIFGSIANSINIPISELREKWKILE---------------RDKKYAVICAH 64 (108)
T ss_dssp CCEECHHHHHHTTTT---CEEEECSCHHHHTTCBCTTCEECCHHHHHHHGGGSC---------------TTSCEEEECSS
T ss_pred ccEeCHHHHHHHHcC---CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhCC---------------CCCeEEEEcCC
Confidence 467999999998864 899999999999999999999999998876554432 25899999999
Q ss_pred ChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCCCC
Q 013384 405 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSFP 442 (444)
Q Consensus 405 G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~P 442 (444)
|.+|..|++.|+++|| +|++|.||+.+|.+++.|..+
T Consensus 65 G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 65 GNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp SHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred CcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 9999999999999999 999999999999999988765
No 20
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.85 E-value=5e-22 Score=165.12 Aligned_cols=99 Identities=23% Similarity=0.396 Sum_probs=86.3
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcC
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR 403 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~ 403 (444)
..+.|+++++.++++++ +.+|||||++.||..||||||+|||+..+...+..+ +++++|||||+
T Consensus 3 ~~~~i~~~~l~~~~~~~-~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l---------------~~~~~ivvyc~ 66 (108)
T 1gmx_A 3 QFECINVADAHQKLQEK-EAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDN---------------DFDTPVMVMCY 66 (108)
T ss_dssp SCEEECHHHHHHHHHTT-CCEEEECSCHHHHHHCEETTCEECCHHHHHHHHHHS---------------CTTSCEEEECS
T ss_pred cccccCHHHHHHHHhCC-CCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHHHhc---------------CCCCCEEEEcC
Confidence 35679999999998764 589999999999999999999999998876544332 22589999999
Q ss_pred CChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 404 RGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 404 ~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+|.+|..|++.|++.||++|+++.||+.+|.+. .|
T Consensus 67 ~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p 101 (108)
T 1gmx_A 67 HGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FP 101 (108)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CG
T ss_pred CCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CC
Confidence 999999999999999999999999999999876 44
No 21
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2e-21 Score=168.89 Aligned_cols=114 Identities=22% Similarity=0.366 Sum_probs=93.9
Q ss_pred CCCCccCHHHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhhhhh----hhHHHhhhhhhhcCCCCCCCCe
Q 013384 323 SADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLP----EISSAMKEKEEHRGSNASSGSN 397 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~----~l~~~~~~~~~~~~~~~~~~~~ 397 (444)
.....|+++|+.+++.++ ++++|||||++.||+.||||||+|||+..+..... ++.+.+.. ...+++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~ 93 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGI------PKPDSAKE 93 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSS------CCCCTTSE
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhc------cCCCCCCe
Confidence 456789999999999752 56899999999999999999999999998865432 22222211 12245689
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCCCC
Q 013384 398 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSFP 442 (444)
Q Consensus 398 Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~P 442 (444)
|||||++|.+|..|++.|+++||++|++|.||+.+|...+.|.+.
T Consensus 94 ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 94 LIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp EEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred EEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999999887664
No 22
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.84 E-value=1.6e-21 Score=166.26 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=89.3
Q ss_pred CccCHHHHHHHHhcCC-CcEEEEecCcccc-cccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcC
Q 013384 326 SRISSKEYKEKVVNGE-AHILVDVRPAHHF-RIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR 403 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~-~~~lIDVR~~~ef-~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~ 403 (444)
..|+++|+.+++.+++ +++|||||++.|| ..||||||+|||+..+...+..+. ++++|||||+
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~l~---------------~~~~ivvyC~ 79 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGELD---------------PAKTYVVYDW 79 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGGSC---------------TTSEEEEECS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhcCC---------------CCCeEEEEeC
Confidence 4699999999998753 5899999999998 999999999999988775544332 2589999999
Q ss_pred CChh--HHHHHHHHHHcCCCCEEEccccHHHHhhCcCCCCCC
Q 013384 404 RGND--SQRAVQALHKLGFTSARDIIGGLESWANDVDPSFPV 443 (444)
Q Consensus 404 ~G~~--S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~P~ 443 (444)
+|.+ |..|++.|++.||+ |++|.||+.+|...+.|.+|.
T Consensus 80 ~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 80 TGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp SSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred CCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 9998 89999999999996 999999999999999998774
No 23
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.84 E-value=1e-21 Score=162.80 Aligned_cols=98 Identities=22% Similarity=0.410 Sum_probs=76.3
Q ss_pred HHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhhhh-hhhHHHhhhhhhhcCCCCCCCCeEEEEcCCChhH
Q 013384 331 KEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL-PEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDS 408 (444)
Q Consensus 331 ~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S 408 (444)
+|+++++.++ ++++|||||++.||..||||||+|||+..+.... ..+ +++++|||||++|.+|
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~l---------------~~~~~ivvyc~~g~rs 65 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSL---------------EKSRDIYVYGAGDEQT 65 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHHHHS---------------CTTSCEEEECSSHHHH
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHHhcC---------------CCCCeEEEEECCCChH
Confidence 3567777643 4589999999999999999999999998876532 111 2357999999999999
Q ss_pred HHHHHHHHHcCCCCEEEccccHHHHhhCcCCCCCC
Q 013384 409 QRAVQALHKLGFTSARDIIGGLESWANDVDPSFPV 443 (444)
Q Consensus 409 ~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~P~ 443 (444)
..|++.|+.+||++|++|.||+.+|.+++.|+.|.
T Consensus 66 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~ 100 (106)
T 3hix_A 66 SQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELE 100 (106)
T ss_dssp HHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCC
Confidence 99999999999999999999999999999887653
No 24
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.83 E-value=3e-21 Score=156.36 Aligned_cols=93 Identities=24% Similarity=0.338 Sum_probs=76.9
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 405 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G 405 (444)
+.||++++.+++++ +.+|||||++.||+.+|||||+|+|+.++...+..+ ++ ++||+||++|
T Consensus 2 ~~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~l---------------~~-~~ivvyC~~g 63 (94)
T 1wv9_A 2 RKVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHGL---------------PR-RPLLLVCEKG 63 (94)
T ss_dssp CEECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCCC---------------CS-SCEEEECSSS
T ss_pred CcCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHhC---------------CC-CCEEEEcCCC
Confidence 46899999998875 489999999999999999999999998876543221 33 6899999999
Q ss_pred hhHHHHHHHHHHcCCCCEEEccccHHHHhhCc
Q 013384 406 NDSQRAVQALHKLGFTSARDIIGGLESWANDV 437 (444)
Q Consensus 406 ~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~ 437 (444)
.+|..|++.|++.||+ |+++.||+.+|.+++
T Consensus 64 ~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 64 LLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred ChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999999999998 999999999998753
No 25
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.83 E-value=4.1e-21 Score=166.67 Aligned_cols=103 Identities=19% Similarity=0.308 Sum_probs=87.7
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccccc-cC--CCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEE
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRI-VS--LPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYV 400 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~-gh--IpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv 400 (444)
....|+++++.+++.++++++|||||++.||+. || ||||+|||+..+... ..+.. .+++++|||
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~-~~~~~------------l~~~~~ivv 87 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL-LAKSG------------LDPEKPVVV 87 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH-HHHHC------------CCTTSCEEE
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH-Hhhcc------------CCCCCeEEE
Confidence 356799999999997445689999999999999 99 999999999887541 01111 134689999
Q ss_pred EcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 401 VCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 401 ~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
||++|.+|..|++.|++.||++|++|.||+.+|.+++.|
T Consensus 88 yC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 126 (137)
T 1qxn_A 88 FCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLP 126 (137)
T ss_dssp ECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCC
T ss_pred EcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCC
Confidence 999999999999999999999999999999999999876
No 26
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.83 E-value=9.6e-21 Score=164.39 Aligned_cols=111 Identities=18% Similarity=0.273 Sum_probs=89.3
Q ss_pred CCCCccCHHHHHHHHhc-CCCcEEEEecCcccccc-cCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEE
Q 013384 323 SADSRISSKEYKEKVVN-GEAHILVDVRPAHHFRI-VSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYV 400 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~-~~~~~lIDVR~~~ef~~-ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv 400 (444)
.....|+++++.+++.+ .++++|||||++.||.. ||||||+|||+..+....+........ ..+++++|||
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~-------~~~~~~~ivv 91 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKP-------IFQEDKKFVF 91 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCG-------GGGSSSEEEE
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhc-------cCCCCCeEEE
Confidence 34568999999999983 25689999999999999 999999999998876533211100000 0134689999
Q ss_pred EcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 401 VCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 401 ~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
||++|.+|..|++.|+++||++|++|.||+.+|.+++.|.
T Consensus 92 yC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 131 (139)
T 2hhg_A 92 YCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPI 131 (139)
T ss_dssp ECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCC
T ss_pred ECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCe
Confidence 9999999999999999999999999999999999987764
No 27
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.82 E-value=9.3e-21 Score=165.25 Aligned_cols=98 Identities=23% Similarity=0.443 Sum_probs=85.1
Q ss_pred cCHHHHHHHHhcCC-CcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCCh
Q 013384 328 ISSKEYKEKVVNGE-AHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGN 406 (444)
Q Consensus 328 Is~~el~~~l~~~~-~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~ 406 (444)
||++|+++++.+++ +++|||||++.||..||||||+|||+..+...... . .+++++|||||++|.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~---~-----------l~~~~~ivvyC~~g~ 67 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASS---S-----------LEKSRDIYVYGAGDE 67 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHHT---T-----------SCTTSEEEEECSSHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHHHh---c-----------CCCCCeEEEEECCCh
Confidence 89999999998653 58999999999999999999999999877553211 0 133589999999999
Q ss_pred hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 407 DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 407 ~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+|..|++.|+.+||++|++|.||+.+|.+++.|
T Consensus 68 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 100 (141)
T 3ilm_A 68 QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGP 100 (141)
T ss_dssp HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCC
Confidence 999999999999999999999999999998765
No 28
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.81 E-value=1.2e-20 Score=162.02 Aligned_cols=108 Identities=25% Similarity=0.425 Sum_probs=85.4
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhh-----hhhhHHHhhhhhhhcCCCCCCCCe
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR-----LPEISSAMKEKEEHRGSNASSGSN 397 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~-----~~~l~~~~~~~~~~~~~~~~~~~~ 397 (444)
.....|+++++.++++. +++|||||++.||..||||||+|||+..+... .+.+..... ..+++++
T Consensus 15 ~~~~~is~~e~~~~l~~--~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~ 84 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLLA--GHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSS--------HFGQSDN 84 (129)
T ss_dssp CCCEEEEHHHHHHHHHH--TCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTT--------TCCTTSS
T ss_pred CCCcccCHHHHHHHhcC--CCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHh--------hCCCCCe
Confidence 44578999999998873 47899999999999999999999999433211 011111111 1134689
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 398 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 398 Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
|||||++|.+|..|++.|++.||++|++|.||+.+|..++.|.
T Consensus 85 ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 127 (129)
T 1tq1_A 85 IIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPT 127 (129)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCC
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999886653
No 29
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.80 E-value=1.8e-20 Score=156.31 Aligned_cols=97 Identities=26% Similarity=0.367 Sum_probs=80.4
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 404 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~ 404 (444)
...||++|+. .++++|||||++.||+.||||||+|||+..+...+.... .+++++|||||++
T Consensus 4 ~~~is~~el~-----~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~~-------------~~~~~~ivvyC~~ 65 (110)
T 2k0z_A 4 DYAISLEEVN-----FNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFLS-------------QHKDKKVLLHCRA 65 (110)
T ss_dssp TTEEETTTCC-----GGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHHH-------------SCSSSCEEEECSS
T ss_pred eeeeCHHHhc-----cCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhcc-------------cCCCCEEEEEeCC
Confidence 3467777762 245899999999999999999999999988765433210 1345899999999
Q ss_pred ChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 405 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 405 G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
|.+|..|++.|++.||++ ++|.||+.+|.+++.|.
T Consensus 66 G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~ 100 (110)
T 2k0z_A 66 GRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRM 100 (110)
T ss_dssp SHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCC
T ss_pred CchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcE
Confidence 999999999999999999 99999999999987663
No 30
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.80 E-value=5.3e-20 Score=161.00 Aligned_cols=99 Identities=24% Similarity=0.496 Sum_probs=85.5
Q ss_pred CccCHHHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhh-hhhhhHHHhhhhhhhcCCCCCCCCeEEEEcC
Q 013384 326 SRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLES-RLPEISSAMKEKEEHRGSNASSGSNLYVVCR 403 (444)
Q Consensus 326 ~~Is~~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~ 403 (444)
..||++|+.+++.++ ++++|||||++.||..||||||+|||+..+.. .+..+ +++++|||||+
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~l---------------~~~~~ivvyC~ 80 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRL---------------SKEKVIITYCW 80 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTTTTC---------------CTTSEEEEECS
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHHhhC---------------CCCCeEEEEEC
Confidence 468999999999875 46899999999999999999999999988763 22222 33589999999
Q ss_pred CC--hhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 404 RG--NDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 404 ~G--~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
+| .+|..|++.|+.+|| +|++|.||+.+|.+++.|.
T Consensus 81 ~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv 118 (144)
T 3nhv_A 81 GPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEV 118 (144)
T ss_dssp CTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCC
T ss_pred CCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCc
Confidence 99 799999999999999 6999999999999987663
No 31
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.77 E-value=2.9e-19 Score=153.48 Aligned_cols=100 Identities=28% Similarity=0.375 Sum_probs=78.7
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhh--------------------------hhhhH
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--------------------------LPEIS 378 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~--------------------------~~~l~ 378 (444)
.+.|+++++.+ .++++|||||++.||..||||||+|||+..+... +..+.
T Consensus 4 ~~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (134)
T 3g5j_A 4 MSVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIY 79 (134)
T ss_dssp -CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHH
T ss_pred ccccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHH
Confidence 46789999875 3568999999999999999999999999654321 01222
Q ss_pred HHhhhhhhhcCCCCCCC-CeEEEEc-CCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCc
Q 013384 379 SAMKEKEEHRGSNASSG-SNLYVVC-RRGNDSQRAVQALHKLGFTSARDIIGGLESWANDV 437 (444)
Q Consensus 379 ~~~~~~~~~~~~~~~~~-~~Ivv~C-~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~ 437 (444)
..+... +++ ++||||| ++|.+|..|++.|+.+|| +|++|.||+.+|++..
T Consensus 80 ~~~~~~--------~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 80 LQAAEL--------ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp HHHHHH--------HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred HHHHHh--------ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 222211 224 7999999 689999999999999999 9999999999998763
No 32
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.77 E-value=2.3e-19 Score=157.57 Aligned_cols=109 Identities=20% Similarity=0.331 Sum_probs=83.3
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccc-cCC------CCceecCchhhhh-----hhhhhHHHhhhhhhhcCCCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRI-VSL------PNSINIPLSDLES-----RLPEISSAMKEKEEHRGSNA 392 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~-ghI------pgAiniP~~~l~~-----~~~~l~~~~~~~~~~~~~~~ 392 (444)
...|+++++.+++.++++.+|||||++.||.. ||| |||+|||+..+.. ..+++.+.+... +.
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~------~~ 77 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPAD------AD 77 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC----------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhc------cC
Confidence 35799999999998645789999999999997 999 9999999987211 122333222111 11
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccH------------HHHhhCcCC
Q 013384 393 SSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGL------------ESWANDVDP 439 (444)
Q Consensus 393 ~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~------------~aW~~~~~p 439 (444)
+++++|||||++|.+|..|++.|+++||++|++|.||+ .+|++++.|
T Consensus 78 ~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp 136 (148)
T 2fsx_A 78 QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLP 136 (148)
T ss_dssp ---CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCS
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCC
Confidence 34689999999999999999999999999999999999 567766655
No 33
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.77 E-value=1.6e-19 Score=143.21 Aligned_cols=80 Identities=26% Similarity=0.511 Sum_probs=69.4
Q ss_pred cEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCC
Q 013384 343 HILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTS 422 (444)
Q Consensus 343 ~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~ 422 (444)
++|||||++.||+.+|||||+|+|+.++...+.++. .+++++|||||++|.+|..|++.|+++||++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~-------------~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~ 68 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAV-------------PDKNDTVKVYCNAGRQSGQAKEILSEMGYTH 68 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHHC-------------CCTTSEEEEEESSSHHHHHHHHHHHHTTCSS
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHhC-------------CCCCCcEEEEcCCCchHHHHHHHHHHcCCCC
Confidence 689999999999999999999999988765544331 1235899999999999999999999999999
Q ss_pred EEEccccHHHHhhC
Q 013384 423 ARDIIGGLESWAND 436 (444)
Q Consensus 423 v~~l~GG~~aW~~~ 436 (444)
|+++ ||+.+|...
T Consensus 69 v~~l-GG~~~w~~~ 81 (85)
T 2jtq_A 69 VENA-GGLKDIAMP 81 (85)
T ss_dssp EEEE-EETTTCCSC
T ss_pred EEec-cCHHHHhcc
Confidence 9999 999999653
No 34
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.76 E-value=7.3e-19 Score=155.15 Aligned_cols=107 Identities=19% Similarity=0.217 Sum_probs=85.5
Q ss_pred CCCccCHHHHHHHHhcC---CCcEEEEecCcccccccCCCCceecCchhhhh-hhhhhHHHhhhhhhhcCCCCCCCCeEE
Q 013384 324 ADSRISSKEYKEKVVNG---EAHILVDVRPAHHFRIVSLPNSINIPLSDLES-RLPEISSAMKEKEEHRGSNASSGSNLY 399 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~---~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~Iv 399 (444)
..+.|+++++.+++.++ ++++|||||++ ||..||||||+|||+..+.. .++++...+.+.. ...||
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~---------~~~vV 72 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEK---------KELAV 72 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTT---------CCEEE
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccC---------CCEEE
Confidence 35679999999998763 36899999999 99999999999999988764 3455554443322 24577
Q ss_pred EEc-CCChhHHHHH----HHHHHcCC--CCEEEccccHHHHhhCcCCC
Q 013384 400 VVC-RRGNDSQRAV----QALHKLGF--TSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 400 v~C-~~G~~S~~aa----~~L~~~G~--~~v~~l~GG~~aW~~~~~p~ 440 (444)
+|| ++|.+|..|+ +.|++.|| .+|++|.||+.+|..++.+.
T Consensus 73 ~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 73 FHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp EECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred EEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 789 7999999998 77888897 58999999999999887654
No 35
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.75 E-value=2.5e-19 Score=158.19 Aligned_cols=106 Identities=12% Similarity=0.173 Sum_probs=87.1
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEc
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVC 402 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C 402 (444)
.....|+++++.+++++ ++.+|||||++.||+.||||||+|||+..+...+.++...+ +++++|||||
T Consensus 25 ~~~~~Is~~el~~~l~~-~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~-----------~~~~~iVvyC 92 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRR-PNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNV-----------KDKDTLVFHS 92 (152)
T ss_dssp SSSEEECTTTTTTCCCC-TTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTC-----------CSCCEEEESS
T ss_pred CCCceECHHHHHHHhcC-CCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhc-----------CCCCEEEEEc
Confidence 34567899999887754 46899999999999999999999999998876555443211 2358999999
Q ss_pred C-CChhHHHHHHHHHH--------cCCCCEEEccccHHHHhhCcCCC
Q 013384 403 R-RGNDSQRAVQALHK--------LGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 403 ~-~G~~S~~aa~~L~~--------~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
+ +|.+|..|+..|.+ .||++|++|+||+.+|.+++.|.
T Consensus 93 ~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 139 (152)
T 1t3k_A 93 ALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPV 139 (152)
T ss_dssp SCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcc
Confidence 9 99999999998853 79999999999999999887653
No 36
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.75 E-value=9.5e-19 Score=151.06 Aligned_cols=107 Identities=23% Similarity=0.323 Sum_probs=83.8
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccccCC-------CCceecCchhhhh--hhhhhHHHhhhhhhhcCCCCCCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSL-------PNSINIPLSDLES--RLPEISSAMKEKEEHRGSNASSG 395 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghI-------pgAiniP~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~ 395 (444)
...|+++++.+++.++++++|||||++.||+.+|+ |||+|||+..+.. ..+++...+. .+++
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~---------~~~~ 74 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFK---------DPEN 74 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCS---------CGGG
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhC---------CCCC
Confidence 35799999999987545689999999999986333 7999999977521 1122211110 1235
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccH---HHHhhCcCCC
Q 013384 396 SNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGL---ESWANDVDPS 440 (444)
Q Consensus 396 ~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~---~aW~~~~~p~ 440 (444)
++|||||++|.||..|++.|+++||++|+++.||+ .+|++++.|.
T Consensus 75 ~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~ 122 (134)
T 1vee_A 75 TTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPW 122 (134)
T ss_dssp CEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCE
T ss_pred CEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCC
Confidence 89999999999999999999999999999999999 7899987763
No 37
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.75 E-value=1.4e-18 Score=166.36 Aligned_cols=106 Identities=15% Similarity=0.349 Sum_probs=90.2
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 404 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~ 404 (444)
...|+++|+.+++.+ ++++|||||++.||+.||||||+|+|+..+.+..+.+...+.. +++++||+||.+
T Consensus 121 ~~~Is~~el~~ll~~-~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~---------~kdk~IVvyC~~ 190 (265)
T 4f67_A 121 GTYLSPEEWHQFIQD-PNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLID---------KKDKKIAMFCTG 190 (265)
T ss_dssp TCEECHHHHHHHTTC-TTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGG---------GTTSCEEEECSS
T ss_pred CceECHHHHHHHhcC-CCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhh---------CCCCeEEEEeCC
Confidence 567999999999976 4689999999999999999999999998876544444332221 235899999999
Q ss_pred ChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 405 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 405 G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
|.+|..|++.|++.||++|+.|.||+.+|.++..+.
T Consensus 191 G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~ 226 (265)
T 4f67_A 191 GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES 226 (265)
T ss_dssp SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT
T ss_pred ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc
Confidence 999999999999999999999999999999887654
No 38
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.73 E-value=1.6e-18 Score=161.38 Aligned_cols=119 Identities=11% Similarity=0.160 Sum_probs=89.3
Q ss_pred cccccccCCCCCcccccccCCCCCccCHHHHHHHHhcC-----CCcEEEEecCcccccccCCCCceecCchh-hhhhhhh
Q 013384 303 DYEKFTQSPLSTLPLKLNLLSADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPE 376 (444)
Q Consensus 303 dy~~fcg~~~~~~~~~~~~l~~~~~Is~~el~~~l~~~-----~~~~lIDVR~~~ef~~ghIpgAiniP~~~-l~~~~~~ 376 (444)
||..+|+.+... ......+.|+++++.+++.++ ++++|||||++.||+.||||||+|||+.+ +.+.+..
T Consensus 39 d~~~~~~lp~~~-----~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~ 113 (216)
T 3op3_A 39 DFSKVCALPTVS-----GKHQDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLK 113 (216)
T ss_dssp TSSSBCSSCCCC-----CSCSSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTS
T ss_pred HHHHheeccccc-----ccCCCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhh
Confidence 788899876431 112456789999999999865 26899999999999999999999999975 3222111
Q ss_pred hHHHhhhhhhhcCCCCCCCC--eEEEEcC-CChhHHHHHHHHHHc----------CCCCEEEccccHHHHhhC
Q 013384 377 ISSAMKEKEEHRGSNASSGS--NLYVVCR-RGNDSQRAVQALHKL----------GFTSARDIIGGLESWAND 436 (444)
Q Consensus 377 l~~~~~~~~~~~~~~~~~~~--~Ivv~C~-~G~~S~~aa~~L~~~----------G~~~v~~l~GG~~aW~~~ 436 (444)
.. .+ ..++++ +|||||+ +|.||..|++.|++. ||++|++|.||+.+|.++
T Consensus 114 ~~-~~---------~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~ 176 (216)
T 3op3_A 114 KP-IV---------PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPE 176 (216)
T ss_dssp SC-CC---------CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred cc-cc---------ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHh
Confidence 00 00 001223 5999999 999999999999986 899999999999999876
No 39
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.73 E-value=3.4e-18 Score=153.46 Aligned_cols=112 Identities=17% Similarity=0.242 Sum_probs=87.0
Q ss_pred CCCCccCHHHHHHHHhcCC------CcEEEEecCcccccccCCCCceecCchhhhhh---hhhhHHHhhhhhhhcCCCCC
Q 013384 323 SADSRISSKEYKEKVVNGE------AHILVDVRPAHHFRIVSLPNSINIPLSDLESR---LPEISSAMKEKEEHRGSNAS 393 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~------~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~---~~~l~~~~~~~~~~~~~~~~ 393 (444)
...++||++++.+++.+++ +++|||||+ .||..||||||+|||+..+... ++++.+.+.+... ...
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~----~~~ 102 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQA----DGR 102 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHH----TSS
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcc----ccc
Confidence 4567899999999998653 489999999 9999999999999999998765 4555443333210 001
Q ss_pred CCCeEEEEcCCC-hhHHHHHHHHHH----cC--CCCEEEccccHHHHhhCcCC
Q 013384 394 SGSNLYVVCRRG-NDSQRAVQALHK----LG--FTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 394 ~~~~Ivv~C~~G-~~S~~aa~~L~~----~G--~~~v~~l~GG~~aW~~~~~p 439 (444)
.+++|||||++| .||..|+.+|.+ .| +.+|++|.||+.+|.+++.|
T Consensus 103 ~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~ 155 (169)
T 3f4a_A 103 GALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGD 155 (169)
T ss_dssp SCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTT
T ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCC
Confidence 136999999987 899999877765 36 57899999999999988654
No 40
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.73 E-value=4e-18 Score=167.19 Aligned_cols=114 Identities=20% Similarity=0.276 Sum_probs=93.7
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccc-----------cccCCCCceecCchhhhhh------hhhhHHHhhhhh
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLSDLESR------LPEISSAMKEKE 385 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef-----------~~ghIpgAiniP~~~l~~~------~~~l~~~~~~~~ 385 (444)
.+...++++++.+.+++ ++++|||||++.|| ..||||||+|||+.++.+. .+++.+.+....
T Consensus 172 ~~~~~i~~~e~~~~~~~-~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~ 250 (302)
T 3olh_A 172 DPAFIKTYEDIKENLES-RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKK 250 (302)
T ss_dssp CGGGEECHHHHHHHHHH-CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTT
T ss_pred CccceecHHHHHHhhcC-CCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcC
Confidence 34567999999998876 46899999999999 7899999999999987542 234444433221
Q ss_pred hhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCCCCC
Q 013384 386 EHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSFPV 443 (444)
Q Consensus 386 ~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~P~ 443 (444)
.+++++||+||++|.+|..++..|+.+||++|++|+|||.+|...++|+|.+
T Consensus 251 ------~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~~~~ 302 (302)
T 3olh_A 251 ------VDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVI 302 (302)
T ss_dssp ------CCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCCC--
T ss_pred ------CCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCCCCC
Confidence 2557899999999999999999999999999999999999999999998863
No 41
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.72 E-value=2.4e-18 Score=153.04 Aligned_cols=106 Identities=9% Similarity=0.196 Sum_probs=84.4
Q ss_pred CCCCccCHHHHHHHHhcC-----CCcEEEEecCcccccccCCCCceecCchhhhhhh-hhhHHHhhhhhhhcCCCCCCCC
Q 013384 323 SADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL-PEISSAMKEKEEHRGSNASSGS 396 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~-----~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~ 396 (444)
...+.|+++++.+++.++ ++++|||||++.||+.||||||+|||+..+.... ... ..+ .++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~-~~~----------~~~~~ 88 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKK-PIV----------PTDGK 88 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTS-CCC----------CCTTS
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhh-hhc----------cCCCC
Confidence 345789999999999764 3689999999999999999999999998764421 110 000 12356
Q ss_pred eE--EEEcC-CChhHHHHHHHHHHc----------CCCCEEEccccHHHHhhCcCC
Q 013384 397 NL--YVVCR-RGNDSQRAVQALHKL----------GFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 397 ~I--vv~C~-~G~~S~~aa~~L~~~----------G~~~v~~l~GG~~aW~~~~~p 439 (444)
+| |+||+ +|.+|..|++.|++. ||++|+++.||+.+|.+++.|
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~ 144 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGG
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHccc
Confidence 75 57899 999999999999864 999999999999999987654
No 42
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.71 E-value=8.8e-18 Score=151.54 Aligned_cols=107 Identities=12% Similarity=0.172 Sum_probs=83.1
Q ss_pred CCCCccCHHHHHHHHhcC-----CCcEEEEecCcccccccCCCCceecCchhhhhhh-hhhHHHhhhhhhhcCCCCCCCC
Q 013384 323 SADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL-PEISSAMKEKEEHRGSNASSGS 396 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~-----~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~ 396 (444)
...+.|+++++.+++.++ ++++|||||++.||+.||||||+|||+..+.... ... ..++ .++++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~-~~~~---------~~~~~ 90 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKS-PIAP---------CSLDK 90 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSS-CCCC-------------C
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhh-hhcc---------ccCCC
Confidence 456789999999999764 3689999999999999999999999998764321 100 0010 12357
Q ss_pred eEEE--EcC-CChhHHHHHHHHHH----------cCCCCEEEccccHHHHhhCcCC
Q 013384 397 NLYV--VCR-RGNDSQRAVQALHK----------LGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 397 ~Ivv--~C~-~G~~S~~aa~~L~~----------~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+||| ||+ +|.+|..|++.|++ +||++|++|.||+.+|.+++.|
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~ 146 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 146 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCcc
Confidence 8755 599 89999999999986 4999999999999999988654
No 43
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.70 E-value=3.7e-17 Score=157.57 Aligned_cols=108 Identities=15% Similarity=0.292 Sum_probs=88.0
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCccccc--------ccCCCCceecCchhhhhhh------hhhHHHhhhhhhhcCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFR--------IVSLPNSINIPLSDLESRL------PEISSAMKEKEEHRGS 390 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~--------~ghIpgAiniP~~~l~~~~------~~l~~~~~~~~~~~~~ 390 (444)
...|+++++.+++.+ .+++|||||++.||. .||||||+|||+..+.+.. +++.+.+...
T Consensus 146 ~~~i~~~~l~~~l~~-~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~------ 218 (271)
T 1e0c_A 146 EPTASRDYLLGRLGA-ADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEEL------ 218 (271)
T ss_dssp TTBCCHHHHHHHTTC-TTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHT------
T ss_pred cccccHHHHHHHhcC-CCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHc------
Confidence 356899999998876 468999999999999 9999999999998875431 2233323221
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhC-cCC
Q 013384 391 NASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAND-VDP 439 (444)
Q Consensus 391 ~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~-~~p 439 (444)
..+++++|||||++|.+|..++..|+.+||++|++|.||+.+|... +.|
T Consensus 219 ~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~p 268 (271)
T 1e0c_A 219 GITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTP 268 (271)
T ss_dssp TCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCC
T ss_pred CCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCC
Confidence 1245789999999999999999999999999999999999999876 444
No 44
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.70 E-value=1.5e-17 Score=154.72 Aligned_cols=107 Identities=14% Similarity=0.213 Sum_probs=85.7
Q ss_pred CCCCccCHHHHHHHHhcC-----CCcEEEEecCcccccccCCCCceecCchhhhhh-hhhhHHHhhhhhhhcCCCCCCCC
Q 013384 323 SADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR-LPEISSAMKEKEEHRGSNASSGS 396 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~-----~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~ 396 (444)
.....|+++++.+++.++ ++++|||||++.||..||||||+|||+..+... +.... . ...++++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~~~-~---------l~~~~d~ 110 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSP-I---------APCSLDK 110 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTTT-C---------CCSSTTS
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhhhh-h---------ccccCCC
Confidence 456889999999999763 368999999999999999999999999876542 11100 0 1112357
Q ss_pred eE--EEEcC-CChhHHHHHHHHHH----------cCCCCEEEccccHHHHhhCcCC
Q 013384 397 NL--YVVCR-RGNDSQRAVQALHK----------LGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 397 ~I--vv~C~-~G~~S~~aa~~L~~----------~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+| |+||+ +|.+|..|++.|++ +||++|++|.||+.+|.+++.|
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~ 166 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 166 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCcc
Confidence 87 77899 99999999999986 6999999999999999988654
No 45
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.69 E-value=3e-17 Score=158.22 Aligned_cols=107 Identities=18% Similarity=0.235 Sum_probs=87.8
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhh----------hhhhHHHhhhhhhhcCCCCCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR----------LPEISSAMKEKEEHRGSNASSG 395 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~----------~~~l~~~~~~~~~~~~~~~~~~ 395 (444)
..|+++++.+++++ ++++|||||++.||..+|||||+|||+..+... .+.+...+... +.+++
T Consensus 9 ~~is~~~l~~~l~~-~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~------gi~~~ 81 (271)
T 1e0c_A 9 LVIEPADLQARLSA-PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGEL------GHRPE 81 (271)
T ss_dssp SEECHHHHHTTTTC-TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHH------TCCTT
T ss_pred ceeeHHHHHHhccC-CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHc------CCCCC
Confidence 47999999998865 468999999999999999999999999887543 11233333221 12446
Q ss_pred CeEEEEcCCCh-hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 396 SNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 396 ~~Ivv~C~~G~-~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
++|||||++|. +|..+++.|+.+||++|++|.||+.+|..++.|
T Consensus 82 ~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p 126 (271)
T 1e0c_A 82 AVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126 (271)
T ss_dssp CEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred CeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCC
Confidence 89999999998 999999999999999999999999999998765
No 46
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.69 E-value=6.1e-18 Score=149.09 Aligned_cols=110 Identities=21% Similarity=0.313 Sum_probs=81.4
Q ss_pred CccCHHHHHHHHhc-CCCcEEEEecCcccccccCCCCceecCchhhh-hhhh----hhHHHhhhhhhhcCCCCCCCCeEE
Q 013384 326 SRISSKEYKEKVVN-GEAHILVDVRPAHHFRIVSLPNSINIPLSDLE-SRLP----EISSAMKEKEEHRGSNASSGSNLY 399 (444)
Q Consensus 326 ~~Is~~el~~~l~~-~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~-~~~~----~l~~~~~~~~~~~~~~~~~~~~Iv 399 (444)
++|+++++.+++++ +++++|||||++.||+.||||||+|||+..+. .... .+...+.... ......+++++||
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~-~~~~~~~~~~~iV 82 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSA-KHKVDIDCSQKVV 82 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSC-SSCCCCCTTSEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchh-hhhhccCCCCeEE
Confidence 57999999999974 35689999999999999999999999998763 2211 0111110000 0011234578999
Q ss_pred EEcCCChhHHHH------HHHHHHc--CCCCEEEccccHHHHhhC
Q 013384 400 VVCRRGNDSQRA------VQALHKL--GFTSARDIIGGLESWAND 436 (444)
Q Consensus 400 v~C~~G~~S~~a------a~~L~~~--G~~~v~~l~GG~~aW~~~ 436 (444)
|||++|.+|..+ ++.|+.+ ||++|++|.||+.+|...
T Consensus 83 vyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~ 127 (153)
T 2vsw_A 83 VYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC 127 (153)
T ss_dssp EECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHH
T ss_pred EEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHh
Confidence 999999988776 5777744 999999999999999875
No 47
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.68 E-value=3.1e-17 Score=158.88 Aligned_cols=110 Identities=19% Similarity=0.350 Sum_probs=84.6
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccc-----------cccCCCCceecCchhhhhh-----hhhhHHHhhhhhh
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLSDLESR-----LPEISSAMKEKEE 386 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef-----------~~ghIpgAiniP~~~l~~~-----~~~l~~~~~~~~~ 386 (444)
.+...|+++++.+++.+ .+++|||||++.|| ..||||||+|||+..+... .+++.+.+...
T Consensus 149 ~~~~~i~~~e~~~~~~~-~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~-- 225 (280)
T 1urh_A 149 NPEAVVKVTDVLLASHE-NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGR-- 225 (280)
T ss_dssp CGGGBCCHHHHHHHHHH-TCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTT--
T ss_pred CcccEEcHHHHHHHhcC-CCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHc--
Confidence 34467999999999876 35899999999999 6899999999999988651 22343333221
Q ss_pred hcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhC-cCC
Q 013384 387 HRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAND-VDP 439 (444)
Q Consensus 387 ~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~-~~p 439 (444)
..+++++|||||++|.+|..++..|+.+||++|++|.|||.+|... +.|
T Consensus 226 ----~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~P 275 (280)
T 1urh_A 226 ----GVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP 275 (280)
T ss_dssp ----TCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC--------
T ss_pred ----CCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCC
Confidence 1245789999999999999999999999999999999999999864 444
No 48
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.68 E-value=4.7e-17 Score=157.61 Aligned_cols=107 Identities=19% Similarity=0.233 Sum_probs=87.6
Q ss_pred CccCHHHHHHHHhcCCCcEEEEec----------CcccccccCCCCceecCchhhhhh----------hhhhHHHhhhhh
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVR----------PAHHFRIVSLPNSINIPLSDLESR----------LPEISSAMKEKE 385 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR----------~~~ef~~ghIpgAiniP~~~l~~~----------~~~l~~~~~~~~ 385 (444)
..|+++++.+++.+ ++++||||| ++.||..||||||+|+|+..+... .+.+...+...
T Consensus 4 ~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 81 (280)
T 1urh_A 4 WFVGADWLAEHIDD-PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMREL- 81 (280)
T ss_dssp CEECHHHHHTTTTC-TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT-
T ss_pred ceeeHHHHHHhcCC-CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHc-
Confidence 57999999998875 568999999 778999999999999999876532 12333333221
Q ss_pred hhcCCCCCCCCeEEEEcCCChh-HHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 386 EHRGSNASSGSNLYVVCRRGND-SQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 386 ~~~~~~~~~~~~Ivv~C~~G~~-S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+.+++++|||||++|.+ |..+++.|+.+||++|++|.||+.+|..++.|
T Consensus 82 -----gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 131 (280)
T 1urh_A 82 -----GVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLL 131 (280)
T ss_dssp -----TCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCC
T ss_pred -----CCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCc
Confidence 22457899999999998 99999999999999999999999999988765
No 49
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.67 E-value=9e-17 Score=158.65 Aligned_cols=109 Identities=11% Similarity=0.197 Sum_probs=86.9
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCccc-ccccCCCCceecCchhhhhh--------hhhhHHHhhhhhhhcCCCCCCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHH-FRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSG 395 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~e-f~~ghIpgAiniP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~ 395 (444)
...|+++++.+++.+ ++++|||||++.| |..||||||+|||+...... .+.+...+... +.+++
T Consensus 39 ~~~is~~~l~~~l~~-~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~l------gi~~~ 111 (318)
T 3hzu_A 39 ERLVTADWLSAHMGA-PGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRK------GIARD 111 (318)
T ss_dssp GGEECHHHHHHHTTC-TTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHT------TCCTT
T ss_pred CceecHHHHHHhccC-CCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHc------CCCCC
Confidence 346999999999876 4689999999876 99999999999998532210 12333333322 12557
Q ss_pred CeEEEEcCCCh-hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 396 SNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 396 ~~Ivv~C~~G~-~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
++|||||++|. +|.++++.|+.+||++|++|.||+.+|++++.|.
T Consensus 112 ~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 157 (318)
T 3hzu_A 112 DTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRET 157 (318)
T ss_dssp CEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCC
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCc
Confidence 89999999988 9999999999999999999999999999997663
No 50
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.67 E-value=4.9e-17 Score=144.29 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=80.7
Q ss_pred CCCCCccCHHHHHHHHhc-------CCCcEEEEecCcccccccCCCCceecCchhhhh--hhh--hh--HHHhhhhhhhc
Q 013384 322 LSADSRISSKEYKEKVVN-------GEAHILVDVRPAHHFRIVSLPNSINIPLSDLES--RLP--EI--SSAMKEKEEHR 388 (444)
Q Consensus 322 l~~~~~Is~~el~~~l~~-------~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~--~~~--~l--~~~~~~~~~~~ 388 (444)
+.....|+++++.+++.+ +++.+|||||++.||..||||||+|+|+..+.. .+. .+ ...+.......
T Consensus 7 ~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (158)
T 3tg1_B 7 LASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKD 86 (158)
T ss_dssp ----CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSC
T ss_pred CCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHH
Confidence 456678999999999974 346899999999999999999999999988631 111 11 11111100000
Q ss_pred CCCCCCCCeEEEEcCCC---------hhHHHHHHHHHHcCCCCEEEccccHHHHhhC
Q 013384 389 GSNASSGSNLYVVCRRG---------NDSQRAVQALHKLGFTSARDIIGGLESWAND 436 (444)
Q Consensus 389 ~~~~~~~~~Ivv~C~~G---------~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~ 436 (444)
......+++|||||.+| .+|..+++.|+..|| +|++|.|||.+|...
T Consensus 87 ~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 87 SFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp SSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 01112368999999999 469999999999999 799999999999875
No 51
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.67 E-value=6.2e-17 Score=158.16 Aligned_cols=105 Identities=17% Similarity=0.236 Sum_probs=86.6
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccc------------cccCCCCceecCchhhhhh------hhhhHHHhhhhh
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHF------------RIVSLPNSINIPLSDLESR------LPEISSAMKEKE 385 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef------------~~ghIpgAiniP~~~l~~~------~~~l~~~~~~~~ 385 (444)
....|+++++.+++.+ .+++|||||++.|| ..||||||+|||+.++.+. .+++...+...
T Consensus 158 ~~~~i~~~e~~~~~~~-~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~- 235 (296)
T 1rhs_A 158 RSLLKTYEQVLENLES-KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK- 235 (296)
T ss_dssp GGGEECHHHHHHHHHH-CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT-
T ss_pred cceEEcHHHHHHHhcC-CCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHc-
Confidence 3467999999998876 35899999999999 8899999999999987542 23343333321
Q ss_pred hhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhh
Q 013384 386 EHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 435 (444)
Q Consensus 386 ~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~ 435 (444)
..+++++|||||++|.+|..++..|+.+||++|++|.|||.+|..
T Consensus 236 -----~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 280 (296)
T 1rhs_A 236 -----KVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFH 280 (296)
T ss_dssp -----TCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHH
T ss_pred -----CCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhc
Confidence 124568999999999999999999999999999999999999987
No 52
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.66 E-value=9e-17 Score=169.70 Aligned_cols=104 Identities=22% Similarity=0.272 Sum_probs=89.4
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcC
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR 403 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~ 403 (444)
....||++++.+++.++++.+|||||++.||..+|||||+|||+..+...+..+. + +++++|||||+
T Consensus 5 ~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~---~----------~~~~~iVvyc~ 71 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARV---P----------RRDTPITVYDD 71 (539)
T ss_dssp -CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHS---C----------CTTSCEEEECS
T ss_pred cCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhC---C----------CCCCeEEEEEC
Confidence 3567999999999986557899999999999999999999999988765433221 1 23589999999
Q ss_pred CChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 404 RGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 404 ~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
+|.+|..|++.|+.+||++|++|.||+.+|++++.|.
T Consensus 72 ~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 108 (539)
T 1yt8_A 72 GEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGEL 108 (539)
T ss_dssp SSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCC
T ss_pred CCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCc
Confidence 9999999999999999999999999999999998765
No 53
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.66 E-value=3.7e-17 Score=141.53 Aligned_cols=111 Identities=16% Similarity=0.285 Sum_probs=75.3
Q ss_pred ccCHHHHHH--------HHhcCCCcEEEEecCcccccccCCCCceecCchhhhhh--h--hh--hHHHhhhhhhhcCCCC
Q 013384 327 RISSKEYKE--------KVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--L--PE--ISSAMKEKEEHRGSNA 392 (444)
Q Consensus 327 ~Is~~el~~--------~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~--~--~~--l~~~~~~~~~~~~~~~ 392 (444)
.|+++|+.+ .+.+ ++++|||||++.||..||||||+|||+..+... + .. ++..+...........
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~-~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPS-QGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKR 80 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHH
T ss_pred ccCHHHHHHHHHhcccccCCC-CCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhc
Confidence 589999998 4443 468999999999999999999999999875321 1 11 1111110000000000
Q ss_pred CCCCeEEEEcCCChhH---------HHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 393 SSGSNLYVVCRRGNDS---------QRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 393 ~~~~~Ivv~C~~G~~S---------~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
.++++|||||++|.++ ..++..|+..|| +|++|.||+.+|...+.+
T Consensus 81 ~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~ 135 (142)
T 2ouc_A 81 IFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHEN 135 (142)
T ss_dssp HHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGG
T ss_pred cCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHH
Confidence 0137999999999874 568888999999 999999999999887543
No 54
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.65 E-value=3e-16 Score=153.26 Aligned_cols=109 Identities=15% Similarity=0.251 Sum_probs=87.9
Q ss_pred CCccCHHHHHHHHhcC---CCcEEEEec--------CcccccccCCCCceecCchhhhhhh----------hhhHHHhhh
Q 013384 325 DSRISSKEYKEKVVNG---EAHILVDVR--------PAHHFRIVSLPNSINIPLSDLESRL----------PEISSAMKE 383 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~---~~~~lIDVR--------~~~ef~~ghIpgAiniP~~~l~~~~----------~~l~~~~~~ 383 (444)
...|+++++.+++.++ ++++||||| ++.+|..||||||+|||+..+.... +.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 4679999999999762 468999999 6899999999999999998765431 123332222
Q ss_pred hhhhcCCCCCCCCeEEEEcCC--Chh-HHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 384 KEEHRGSNASSGSNLYVVCRR--GND-SQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 384 ~~~~~~~~~~~~~~Ivv~C~~--G~~-S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
.+.+++++|||||++ |.+ |.++++.|+.+||++|++|.||+.+|..++.|
T Consensus 87 ------lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p 139 (296)
T 1rhs_A 87 ------LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHP 139 (296)
T ss_dssp ------TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred ------cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCc
Confidence 123557899999998 776 88999999999999999999999999998765
No 55
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.64 E-value=1.1e-16 Score=155.37 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=85.3
Q ss_pred CccCHHHHHHHHhcCCCcEEEEec-CcccccccCCCCceecCchhhhhh--------hhhhHHHhhhhhhhcCCCCCCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVR-PAHHFRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSGS 396 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR-~~~ef~~ghIpgAiniP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~~ 396 (444)
..|+++++.+++++ ++++||||| ++.+|..||||||+|+|+...... .+.+...+... +.++++
T Consensus 8 ~~is~~~l~~~l~~-~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~------gi~~~~ 80 (285)
T 1uar_A 8 VLVSTDWVQEHLED-PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERL------GISNDT 80 (285)
T ss_dssp GEECHHHHHTTTTC-TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHT------TCCTTC
T ss_pred ceEcHHHHHHhcCC-CCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHc------CCCCCC
Confidence 46999999998875 468999999 789999999999999999752210 11233332221 124568
Q ss_pred eEEEEcCCCh-hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 397 NLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 397 ~Ivv~C~~G~-~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+|||||++|. +|..+++.|+.+||++|++|.||+.+|..++.|
T Consensus 81 ~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 124 (285)
T 1uar_A 81 TVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRP 124 (285)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCC
T ss_pred eEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCc
Confidence 9999999988 799999999999999999999999999988765
No 56
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.63 E-value=5e-16 Score=150.69 Aligned_cols=108 Identities=22% Similarity=0.391 Sum_probs=85.8
Q ss_pred CCccCHHHHHHHHh---cCCCcEEEEecCccccc----------------ccCCCCceecCchhhhhh------hhhhHH
Q 013384 325 DSRISSKEYKEKVV---NGEAHILVDVRPAHHFR----------------IVSLPNSINIPLSDLESR------LPEISS 379 (444)
Q Consensus 325 ~~~Is~~el~~~l~---~~~~~~lIDVR~~~ef~----------------~ghIpgAiniP~~~l~~~------~~~l~~ 379 (444)
...|+++++.+++. .+ +..|||||++.||. .||||||+|||+..+.+. .+++.+
T Consensus 145 ~~~i~~~el~~~l~~~~~~-~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~ 223 (285)
T 1uar_A 145 SIRAYRDDVLEHIIKVKEG-KGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRA 223 (285)
T ss_dssp GGEECHHHHHHHHHHHHTT-SEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred ceEEcHHHHHHHHhhcccC-CCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHH
Confidence 35799999999884 12 24799999999997 899999999999887532 223333
Q ss_pred HhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHH-HcCCCCEEEccccHHHHh-hCcCC
Q 013384 380 AMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALH-KLGFTSARDIIGGLESWA-NDVDP 439 (444)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~-~~G~~~v~~l~GG~~aW~-~~~~p 439 (444)
.+... +.+++++|||||++|.+|..+++.|+ .+||++|++|.|||.+|. ..+.|
T Consensus 224 ~~~~~------g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~p 279 (285)
T 1uar_A 224 LYEPL------GITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVP 279 (285)
T ss_dssp HHGGG------TCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCC
T ss_pred HHHHc------CCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCC
Confidence 33321 12457899999999999999999999 999999999999999997 56554
No 57
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.63 E-value=2.4e-16 Score=152.28 Aligned_cols=107 Identities=13% Similarity=0.176 Sum_probs=85.0
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecC-cccccccCCCCceecCchhhhhh--------hhhhHHHhhhhhhhcCCCCCCCC
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRP-AHHFRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSGS 396 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~-~~ef~~ghIpgAiniP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~~ 396 (444)
..|+++++.+++.+ ++++|||||+ +.+|..||||||+|||+..+... .+.+...+.... .++++
T Consensus 6 ~~is~~~l~~~l~~-~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g------i~~~~ 78 (277)
T 3aay_A 6 VLVSADWAESNLHA-PKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERG------IANED 78 (277)
T ss_dssp HEECHHHHHTTTTC-TTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHT------CCTTS
T ss_pred ceEcHHHHHHHhCC-CCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcC------CCCCC
Confidence 35899999998875 3689999998 89999999999999998753221 122333332211 24568
Q ss_pred eEEEEcCCCh-hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 397 NLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 397 ~Ivv~C~~G~-~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+|||||++|. +|..+++.|+.+||++|++|.||+.+|..++.|
T Consensus 79 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 122 (277)
T 3aay_A 79 TVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRP 122 (277)
T ss_dssp EEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCC
T ss_pred eEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCc
Confidence 9999999875 799999999999999999999999999988765
No 58
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.62 E-value=2.8e-16 Score=163.40 Aligned_cols=101 Identities=27% Similarity=0.502 Sum_probs=89.0
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEc
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVC 402 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C 402 (444)
.....|+++++.+++.+ ++.+|||||++.||..||||||+|+|+.++.+.+..+ +++++||+||
T Consensus 371 ~~~~~i~~~~l~~~~~~-~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l---------------~~~~~vvv~C 434 (474)
T 3tp9_A 371 ASYANVSPDEVRGALAQ-QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDV---------------PRDGSVCVYC 434 (474)
T ss_dssp ECCEEECHHHHHHTTTT-TCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTGGGS---------------CSSSCEEEEC
T ss_pred ccccccCHHHHHHHhcC-CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHhcC---------------CCCCEEEEEC
Confidence 44577999999998876 4689999999999999999999999999887655443 2358999999
Q ss_pred CCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 403 RRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 403 ~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
++|.+|..++..|+.+||++|++|.|||.+|.+++.|
T Consensus 435 ~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p 471 (474)
T 3tp9_A 435 RTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFP 471 (474)
T ss_dssp SSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCC
Confidence 9999999999999999999999999999999998655
No 59
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.62 E-value=1.2e-16 Score=140.81 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=77.1
Q ss_pred CCccCHHHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhh-----h---h-hhh-----HHHhhhhhhhcC
Q 013384 325 DSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLES-----R---L-PEI-----SSAMKEKEEHRG 389 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~-----~---~-~~l-----~~~~~~~~~~~~ 389 (444)
...|+++++.++++++ ++++|||||++.||+.||||||+|||+..+.. . + ..+ ...+..
T Consensus 15 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------ 88 (154)
T 1hzm_A 15 AISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTR------ 88 (154)
T ss_dssp SSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHH------
T ss_pred ccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhc------
Confidence 4679999999988764 36899999999999999999999999976531 0 0 011 011111
Q ss_pred CCCCCCCeEEEEcCCChhH-------HHHHHHHHHc---CCCCEEEccccHHHHhhC
Q 013384 390 SNASSGSNLYVVCRRGNDS-------QRAVQALHKL---GFTSARDIIGGLESWAND 436 (444)
Q Consensus 390 ~~~~~~~~Ivv~C~~G~~S-------~~aa~~L~~~---G~~~v~~l~GG~~aW~~~ 436 (444)
.+++++|||||++|.++ ..+++.|+.+ ||+ |++|.||+.+|...
T Consensus 89 --~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 89 --RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp --STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred --cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 13358999999998875 4446667765 998 99999999999875
No 60
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.62 E-value=5.6e-16 Score=149.70 Aligned_cols=105 Identities=21% Similarity=0.325 Sum_probs=83.1
Q ss_pred CccCHHHHHHHHhcCCCcEEEEecCcccccc----------------cCCCCceecCchhhhhh------hhhhHHHhhh
Q 013384 326 SRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------------VSLPNSINIPLSDLESR------LPEISSAMKE 383 (444)
Q Consensus 326 ~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~----------------ghIpgAiniP~~~l~~~------~~~l~~~~~~ 383 (444)
-+++++++.+++.++ . |||||++.||.. ||||||+|||+..+... .+++...+..
T Consensus 144 ~~~~~~el~~~~~~~--~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~ 220 (277)
T 3aay_A 144 IRAFRDEVLAAINVK--N-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYAD 220 (277)
T ss_dssp GEECHHHHHHTTTTS--E-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHH
T ss_pred hhcCHHHHHHhcCCC--C-EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHH
Confidence 357899999988654 2 999999999985 99999999999865321 1234443332
Q ss_pred hhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHH-cCCCCEEEccccHHHHhh-CcCC
Q 013384 384 KEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHK-LGFTSARDIIGGLESWAN-DVDP 439 (444)
Q Consensus 384 ~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~-~G~~~v~~l~GG~~aW~~-~~~p 439 (444)
.. .+++++|||||++|.+|..++..|++ +||++|++|.|||.+|.. .+.|
T Consensus 221 ~~------~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~p 272 (277)
T 3aay_A 221 AG------LDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAP 272 (277)
T ss_dssp HT------CCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCC
T ss_pred cC------CCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCC
Confidence 21 24568999999999999999999996 999999999999999987 6544
No 61
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.61 E-value=6.1e-16 Score=145.53 Aligned_cols=98 Identities=28% Similarity=0.419 Sum_probs=80.7
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecCcccccc----------cCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCC
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------VSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASS 394 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~----------ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 394 (444)
...|+++++.+ +.+|||||++.||.. ||||||+|+|+.++.+..+.+.. . ..++
T Consensus 120 ~~~i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~e~~~~----~------~~~~ 183 (230)
T 2eg4_A 120 DWLLTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLER----L------GLQP 183 (230)
T ss_dssp GGBCCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCTTHHHH----H------TCCT
T ss_pred cceeCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChHHHHHh----c------CCCC
Confidence 45689998875 378999999999999 99999999999988653211111 1 1134
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 395 GSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 395 ~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+++||+||++|.+|..++..|+++| .+|++|.|||.+|...+.|
T Consensus 184 ~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p 227 (230)
T 2eg4_A 184 GQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLP 227 (230)
T ss_dssp TCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCC
T ss_pred CCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCC
Confidence 6899999999999999999999999 8999999999999988654
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.60 E-value=4.6e-16 Score=137.88 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=75.9
Q ss_pred CCCCCccCHHHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhhh--hhhhHHHhhhhhhhcCCCCCCCCeE
Q 013384 322 LSADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--LPEISSAMKEKEEHRGSNASSGSNL 398 (444)
Q Consensus 322 l~~~~~Is~~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~I 398 (444)
+...+.|+++|+.+++.++ ++++|||||++.||+.||||||+|||+..+... ...+...+++..........+...|
T Consensus 16 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~V 95 (157)
T 2gwf_A 16 PRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 95 (157)
T ss_dssp ---CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEE
T ss_pred cCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEE
Confidence 3556789999999999764 368999999999999999999999999876532 2233333222110000000123468
Q ss_pred EEEcCCChh----HHHHHHHHH----Hc----CCCC-EEEccccHHHHhhC
Q 013384 399 YVVCRRGND----SQRAVQALH----KL----GFTS-ARDIIGGLESWAND 436 (444)
Q Consensus 399 vv~C~~G~~----S~~aa~~L~----~~----G~~~-v~~l~GG~~aW~~~ 436 (444)
||||.+|.+ +..+++.|. +. ||.+ |++|.|||.+|.+.
T Consensus 96 Vvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 96 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 146 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred EEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH
Confidence 888987753 344556655 22 4544 99999999999874
No 63
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.60 E-value=1.3e-15 Score=149.35 Aligned_cols=108 Identities=14% Similarity=0.202 Sum_probs=85.7
Q ss_pred CccCHHHHHHHHhcC---CCcEEEEec---------CcccccccCCCCceecCchhhhhh----------hhhhHHHhhh
Q 013384 326 SRISSKEYKEKVVNG---EAHILVDVR---------PAHHFRIVSLPNSINIPLSDLESR----------LPEISSAMKE 383 (444)
Q Consensus 326 ~~Is~~el~~~l~~~---~~~~lIDVR---------~~~ef~~ghIpgAiniP~~~l~~~----------~~~l~~~~~~ 383 (444)
..||++++.+++.++ ++.+||||| ++.||..||||||+|||+..+.+. .+.+...+..
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 469999999999864 368999999 788999999999999999765321 1223333322
Q ss_pred hhhhcCCCCCCCCeEEEEcCC---ChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 384 KEEHRGSNASSGSNLYVVCRR---GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 384 ~~~~~~~~~~~~~~Ivv~C~~---G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
. +.+++++|||||++ +.+|.++++.|+.+||++|++|.||+.+|..++.|
T Consensus 102 l------gi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p 154 (302)
T 3olh_A 102 L------GVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLP 154 (302)
T ss_dssp T------TCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC
T ss_pred c------CCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCC
Confidence 2 23557899999964 34699999999999999999999999999998765
No 64
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.60 E-value=8.4e-16 Score=151.69 Aligned_cols=105 Identities=22% Similarity=0.320 Sum_probs=85.0
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccccc----------------cCCCCceecCchhhhhh------hhhhHHHh
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------------VSLPNSINIPLSDLESR------LPEISSAM 381 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~----------------ghIpgAiniP~~~l~~~------~~~l~~~~ 381 (444)
+..+|+++|+.++++++ +|||||++.||.. ||||||+|||+.++.+. .+++.+.+
T Consensus 177 ~~~~i~~~el~~~l~~~---~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~ 253 (318)
T 3hzu_A 177 APIRAFRDDVLAILGAQ---PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY 253 (318)
T ss_dssp TTTBCCHHHHHHHTTTS---CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHT
T ss_pred ccccccHHHHHHhhcCC---eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHh
Confidence 34578999999988753 8999999999998 99999999999876431 13344333
Q ss_pred hhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHH-cCCCCEEEccccHHHHhh-CcCC
Q 013384 382 KEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHK-LGFTSARDIIGGLESWAN-DVDP 439 (444)
Q Consensus 382 ~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~-~G~~~v~~l~GG~~aW~~-~~~p 439 (444)
. ..+++++|||||++|.+|..++..|++ +||++|++|.|||.+|.. .+.|
T Consensus 254 ~--------~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~P 305 (318)
T 3hzu_A 254 D--------FINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVP 305 (318)
T ss_dssp T--------TCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCC
T ss_pred c--------CCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCC
Confidence 1 124568999999999999999999997 899999999999999985 3443
No 65
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.60 E-value=7.2e-16 Score=164.38 Aligned_cols=99 Identities=25% Similarity=0.452 Sum_probs=87.1
Q ss_pred CCCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEE
Q 013384 322 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 401 (444)
Q Consensus 322 l~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~ 401 (444)
....+.|+++|+.+++++ +.+|||||++.||+.+|||||+|||++++.+.+..++ ++++||+|
T Consensus 485 ~~~~~~i~~~~~~~~~~~--~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~~~l~---------------~~~~iv~~ 547 (588)
T 3ics_A 485 DGFVDTVQWHEIDRIVEN--GGYLIDVREPNELKQGMIKGSINIPLDELRDRLEEVP---------------VDKDIYIT 547 (588)
T ss_dssp TTSCCEECTTTHHHHHHT--TCEEEECSCGGGGGGCBCTTEEECCHHHHTTCGGGSC---------------SSSCEEEE
T ss_pred ccccceecHHHHHHHhcC--CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHHhhCC---------------CCCeEEEE
Confidence 456788999999999864 4899999999999999999999999998876655432 25899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcC
Q 013384 402 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVD 438 (444)
Q Consensus 402 C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~ 438 (444)
|++|.+|..+++.|++.||+ |++|.||+.+|++...
T Consensus 548 C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~~ 583 (588)
T 3ics_A 548 CQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVLP 583 (588)
T ss_dssp CSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHCG
T ss_pred CCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhhh
Confidence 99999999999999999998 9999999999987644
No 66
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.59 E-value=5.3e-16 Score=137.46 Aligned_cols=116 Identities=12% Similarity=0.190 Sum_probs=78.3
Q ss_pred cCCCCCccCHHHHHHHHhcC-CCcEEEEecCcccccccCCCCceecCchhhhhh--hhhhHHHhhhhhhhcCCCCCCCCe
Q 013384 321 LLSADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--LPEISSAMKEKEEHRGSNASSGSN 397 (444)
Q Consensus 321 ~l~~~~~Is~~el~~~l~~~-~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~ 397 (444)
.++..+.|+++|+.+++.++ ++++|||||++.||+.||||||+|||+..+... ...+...+++..........+...
T Consensus 10 ~~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~ 89 (157)
T 1whb_A 10 ETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEY 89 (157)
T ss_dssp CCCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSE
T ss_pred ccccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCE
Confidence 45778899999999998764 368999999999999999999999999766432 122222222110000000011245
Q ss_pred EEEEcCCChh----HHHHHHHHHH----c----CCCC-EEEccccHHHHhhC
Q 013384 398 LYVVCRRGND----SQRAVQALHK----L----GFTS-ARDIIGGLESWAND 436 (444)
Q Consensus 398 Ivv~C~~G~~----S~~aa~~L~~----~----G~~~-v~~l~GG~~aW~~~ 436 (444)
|||||..+.+ +..+++.|.+ . ||.+ |++|.|||.+|.+.
T Consensus 90 VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 90 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 141 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH
T ss_pred EEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH
Confidence 8899987753 3556667663 2 4543 99999999999875
No 67
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.58 E-value=9.9e-16 Score=162.29 Aligned_cols=96 Identities=23% Similarity=0.432 Sum_probs=83.3
Q ss_pred CCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEc
Q 013384 323 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVC 402 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C 402 (444)
.....|+++|+.++ +++++|||||++.||+.+|||||+|||++++.+.+.+++ ++++||+||
T Consensus 470 ~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~~~---------------~~~~iv~~c 531 (565)
T 3ntd_A 470 GDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELP---------------KDKEIIIFS 531 (565)
T ss_dssp TSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGGSC---------------TTSEEEEEC
T ss_pred cccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhhcC---------------CcCeEEEEe
Confidence 44567888888766 356899999999999999999999999998876655432 258999999
Q ss_pred CCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCc
Q 013384 403 RRGNDSQRAVQALHKLGFTSARDIIGGLESWANDV 437 (444)
Q Consensus 403 ~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~ 437 (444)
++|.+|..+++.|++.|| +|++|.||+.+|++++
T Consensus 532 ~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 532 QVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp SSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 999999999999999999 9999999999998763
No 68
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.58 E-value=1.1e-15 Score=153.86 Aligned_cols=105 Identities=15% Similarity=0.128 Sum_probs=84.3
Q ss_pred CCccCHHHHHHHHhcCCCcEEEEecC--------cccccccCCCCceecCchh-hhhh------------hhhhHHHhhh
Q 013384 325 DSRISSKEYKEKVVNGEAHILVDVRP--------AHHFRIVSLPNSINIPLSD-LESR------------LPEISSAMKE 383 (444)
Q Consensus 325 ~~~Is~~el~~~l~~~~~~~lIDVR~--------~~ef~~ghIpgAiniP~~~-l~~~------------~~~l~~~~~~ 383 (444)
...|+++++++++.+ ++|||||+ +.||..||||||+|||+.. +... .+.+.+++..
T Consensus 13 ~~~Is~~el~~~l~~---~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~ 89 (373)
T 1okg_A 13 KVFLDPSEVADHLAE---YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373)
T ss_dssp CCEECHHHHTTCGGG---SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred CcEEcHHHHHHHcCC---cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence 568999999988864 79999998 6999999999999999986 6432 1223333322
Q ss_pred hhhhcCCCCCCCCeEEEEc-CCChhHH-HHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 384 KEEHRGSNASSGSNLYVVC-RRGNDSQ-RAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 384 ~~~~~~~~~~~~~~Ivv~C-~~G~~S~-~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
. +.+++++||||| ++|.+|. ++++.|+.+|| +|++|.||+.+|.+++.|
T Consensus 90 ~------gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~p 140 (373)
T 1okg_A 90 N------GMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLE 140 (373)
T ss_dssp T------TCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCC
T ss_pred c------CCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCC
Confidence 1 235578999999 7788886 99999999999 999999999999998765
No 69
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.58 E-value=2.2e-15 Score=159.14 Aligned_cols=103 Identities=14% Similarity=0.211 Sum_probs=90.1
Q ss_pred CCCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEE
Q 013384 322 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 401 (444)
Q Consensus 322 l~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~ 401 (444)
+.....|+++++.+++.+ .+.+|||||++.||..||||||+|+|..++...+.++ +++++||||
T Consensus 373 ~~~~~~i~~~~l~~~l~~-~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l~~l---------------~~~~~ivv~ 436 (539)
T 1yt8_A 373 QPRADTIDPTTLADWLGE-PGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERL---------------GTAERYVLT 436 (539)
T ss_dssp CCCCCEECHHHHHHHTTS-TTEEEEECSCHHHHHHCBCTTCEECCGGGHHHHHHHH---------------CCCSEEEEE
T ss_pred CCcCCccCHHHHHHHhcC-CCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHHHhC---------------CCCCeEEEE
Confidence 456688999999999876 4689999999999999999999999998877654432 225899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCC
Q 013384 402 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 440 (444)
Q Consensus 402 C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~ 440 (444)
|++|.+|..++..|+.+||++|++|.||+.+|.+++.|.
T Consensus 437 C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv 475 (539)
T 1yt8_A 437 CGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPT 475 (539)
T ss_dssp CSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCC
T ss_pred eCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCc
Confidence 999999999999999999999999999999999987653
No 70
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.56 E-value=5.5e-15 Score=151.47 Aligned_cols=108 Identities=13% Similarity=0.234 Sum_probs=87.4
Q ss_pred CccCHHHHHHHHhc-------CCCcEEEEec--CcccccccCCCCceecCchhhhhh-------hhhhHHHhhhhhhhcC
Q 013384 326 SRISSKEYKEKVVN-------GEAHILVDVR--PAHHFRIVSLPNSINIPLSDLESR-------LPEISSAMKEKEEHRG 389 (444)
Q Consensus 326 ~~Is~~el~~~l~~-------~~~~~lIDVR--~~~ef~~ghIpgAiniP~~~l~~~-------~~~l~~~~~~~~~~~~ 389 (444)
..|+++++.++++. +++.+||||| ++.+|..||||||+|+|+.++... .+++.+.+...
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~----- 198 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH----- 198 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHT-----
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHc-----
Confidence 35788999888863 2468999999 999999999999999999887541 23333333322
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 390 SNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 390 ~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+.+++++||+||++|.+|..++..|+.+||++|++|.||+.+|...+.|
T Consensus 199 -gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~p 247 (423)
T 2wlr_A 199 -GIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLP 247 (423)
T ss_dssp -TCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCC
T ss_pred -CCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCC
Confidence 1245689999999999999999999999999999999999999877654
No 71
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.54 E-value=3.9e-15 Score=152.60 Aligned_cols=105 Identities=13% Similarity=0.203 Sum_probs=83.4
Q ss_pred CCCccCHHHHHHHHhcCCCcEEEEecCcccc-----------cccCCCCceecCch-------hhhh------hhhhhHH
Q 013384 324 ADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLS-------DLES------RLPEISS 379 (444)
Q Consensus 324 ~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef-----------~~ghIpgAiniP~~-------~l~~------~~~~l~~ 379 (444)
+...|+++++.+++.+ ++.+|||||++.|| ..||||||+|+|+. ++.+ ..+++..
T Consensus 270 ~~~~i~~~e~~~~l~~-~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
T 2wlr_A 270 PQLMLDMEQARGLLHR-QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITA 348 (423)
T ss_dssp GGGEECHHHHHTTTTC-SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHH
T ss_pred hhheecHHHHHHHhcC-CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHH
Confidence 3457999999998865 46899999999999 89999999999985 2211 0123433
Q ss_pred HhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhh
Q 013384 380 AMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 435 (444)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~ 435 (444)
.+... ..+++++|||||++|.+|..++..|+.+||++|++|.|||.+|..
T Consensus 349 ~~~~~------~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~ 398 (423)
T 2wlr_A 349 MWKAW------NIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSS 398 (423)
T ss_dssp HHHTT------TCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTT
T ss_pred HHHHc------CCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhc
Confidence 33211 124568999999999999999999999999999999999999987
No 72
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.47 E-value=2e-14 Score=144.74 Aligned_cols=91 Identities=19% Similarity=0.263 Sum_probs=71.4
Q ss_pred CCcEEEEecCccccc-----------ccCCCCceecCchhhh--hh-------hhhhHHHhhhhhhhcCCCCCC---CCe
Q 013384 341 EAHILVDVRPAHHFR-----------IVSLPNSINIPLSDLE--SR-------LPEISSAMKEKEEHRGSNASS---GSN 397 (444)
Q Consensus 341 ~~~~lIDVR~~~ef~-----------~ghIpgAiniP~~~l~--~~-------~~~l~~~~~~~~~~~~~~~~~---~~~ 397 (444)
.+.+|||||++.||. .||||||+|||+.++. +. .+++.+.+.... .+.++ +++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~----~gi~~~~~d~~ 248 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVV----QGAGDAADLSS 248 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTC----C-----CCCTT
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhh----cCCCcccCCCC
Confidence 457899999999999 9999999999999875 21 123333332210 01133 589
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhh
Q 013384 398 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 435 (444)
Q Consensus 398 Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~ 435 (444)
||+||++|.||..++..|+.+||++|++|.|||.+|..
T Consensus 249 ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 286 (373)
T 1okg_A 249 FVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSG 286 (373)
T ss_dssp SEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHH
T ss_pred EEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhc
Confidence 99999999999999999999999999999999999986
No 73
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.47 E-value=3.8e-15 Score=154.51 Aligned_cols=87 Identities=18% Similarity=0.322 Sum_probs=0.0
Q ss_pred HHHHHhcCCCcEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHH
Q 013384 333 YKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAV 412 (444)
Q Consensus 333 l~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa 412 (444)
+.+++.+ ++.+|||||++.||+.||||||+|+|+.++.+.+.++++ +++||+||++|.+|..++
T Consensus 379 ~~~~~~~-~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~~---------------~~~iv~~C~~G~rs~~a~ 442 (466)
T 3r2u_A 379 HSEDITG-NESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNK---------------NDVIYVHCQSGIRSSIAI 442 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhC-CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHHhhCCC---------------CCeEEEECCCChHHHHHH
Confidence 4444444 457899999999999999999999999988765555432 479999999999999999
Q ss_pred HHHHHcCCCCEEEccccHHHHhh
Q 013384 413 QALHKLGFTSARDIIGGLESWAN 435 (444)
Q Consensus 413 ~~L~~~G~~~v~~l~GG~~aW~~ 435 (444)
..|+++||++|++|.|||.+|++
T Consensus 443 ~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 443 GILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -----------------------
T ss_pred HHHHHcCCCCEEEecChHHHHhh
Confidence 99999999999999999999975
No 74
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.46 E-value=3.3e-14 Score=133.65 Aligned_cols=85 Identities=22% Similarity=0.237 Sum_probs=66.3
Q ss_pred cCCCcEEEEecCcccccccCCCCceecCch--hhhhh--------hhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCCh-h
Q 013384 339 NGEAHILVDVRPAHHFRIVSLPNSINIPLS--DLESR--------LPEISSAMKEKEEHRGSNASSGSNLYVVCRRGN-D 407 (444)
Q Consensus 339 ~~~~~~lIDVR~~~ef~~ghIpgAiniP~~--~l~~~--------~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~-~ 407 (444)
++++.+|||||++.+|..||||||+|+|+. .+... .+.+...+... ..+++|||||++|. +
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivvyc~~g~~~ 74 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVLYDEGLTSR 74 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEEECSSSCHH
T ss_pred CCCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEEEcCCCCcc
Confidence 345689999999999999999999999998 44210 01222222211 11589999999998 9
Q ss_pred HHHHHHHHHHcCCCCEEEccccHHHHhh
Q 013384 408 SQRAVQALHKLGFTSARDIIGGLESWAN 435 (444)
Q Consensus 408 S~~aa~~L~~~G~~~v~~l~GG~~aW~~ 435 (444)
|..+++.|+ +||++|++|.|| |.+
T Consensus 75 s~~a~~~L~-~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 75 LCRTAFFLG-LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HHHHHHHHH-HTTCCEEEECSS---CGG
T ss_pred HHHHHHHHH-cCCceEEEeCCC---Ccc
Confidence 999999999 999999999999 865
No 75
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.5e-13 Score=135.56 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=87.6
Q ss_pred CccCHHHHHHHHhcC---CCcEEEEecCccccc-----------ccCCCCceecCchhhhhh--------hhhhHHHhhh
Q 013384 326 SRISSKEYKEKVVNG---EAHILVDVRPAHHFR-----------IVSLPNSINIPLSDLESR--------LPEISSAMKE 383 (444)
Q Consensus 326 ~~Is~~el~~~l~~~---~~~~lIDVR~~~ef~-----------~ghIpgAiniP~~~l~~~--------~~~l~~~~~~ 383 (444)
..++.+++.+.++++ ++.+|||+|++.+|. .||||||+|+|+.++.+. .+.+...+..
T Consensus 184 ~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~ 263 (327)
T 3utn_X 184 EIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEK 263 (327)
T ss_dssp HEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHH
T ss_pred heecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHH
Confidence 357889998888764 246899999999985 499999999999887532 1122222221
Q ss_pred hhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCCCC
Q 013384 384 KEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSF 441 (444)
Q Consensus 384 ~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p~~ 441 (444)
.......+.+++++||+||.+|.+|...+-.|+.+||++|++|+|+|..|....+|.+
T Consensus 264 ~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~pe~ 321 (327)
T 3utn_X 264 ALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPEW 321 (327)
T ss_dssp HHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCGGG
T ss_pred HHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCCcc
Confidence 1111113446779999999999999999999999999999999999999998766643
No 76
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.32 E-value=8.1e-13 Score=137.23 Aligned_cols=100 Identities=17% Similarity=0.252 Sum_probs=81.2
Q ss_pred CCCCCccCHHHHHHHHhcCCCcEEEEecCcccccccCCCCceecCchh-hhhhhhhhHHHhhhhhhhcCCCCCCCCeEEE
Q 013384 322 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPEISSAMKEKEEHRGSNASSGSNLYV 400 (444)
Q Consensus 322 l~~~~~Is~~el~~~l~~~~~~~lIDVR~~~ef~~ghIpgAiniP~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv 400 (444)
.+....|+++++++++.++ +|||||++.+|..+|||||+|+|+.. +..++ ..+. +++++|||
T Consensus 269 ~~~~~~is~~~l~~~l~~~---~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~----~~l~----------~~~~~vvv 331 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG---VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWA----GWLL----------PADRPIHL 331 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS---EEEECSCHHHHHHSEETTCEECCSSTTHHHHH----HHHC----------CSSSCEEE
T ss_pred cCCCceeCHHHHHHHhCCC---EEEECCChHHHhccCCCCeEEECcchHHHHHH----HhcC----------CCCCeEEE
Confidence 4566789999999999763 99999999999999999999999974 22222 2211 23589999
Q ss_pred EcCCChhHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 401 VCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 401 ~C~~G~~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
||..|. +..+++.|+.+||++|+.+.+|+.+|...+.|
T Consensus 332 y~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~ 369 (474)
T 3tp9_A 332 LAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDD 369 (474)
T ss_dssp ECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGG
T ss_pred EECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccc
Confidence 999876 56699999999999999877799999887643
No 77
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.22 E-value=8.1e-12 Score=123.14 Aligned_cols=110 Identities=21% Similarity=0.209 Sum_probs=84.3
Q ss_pred CCCCccCHHHHHHHHhcC--CCcEEEEec---------Ccccc-cccCCCCceecCchhhhhhh----------hhhHHH
Q 013384 323 SADSRISSKEYKEKVVNG--EAHILVDVR---------PAHHF-RIVSLPNSINIPLSDLESRL----------PEISSA 380 (444)
Q Consensus 323 ~~~~~Is~~el~~~l~~~--~~~~lIDVR---------~~~ef-~~ghIpgAiniP~~~l~~~~----------~~l~~~ 380 (444)
+..+-||+++|.+++++. ..+++||++ ...|| +.+|||||+++.++.+.+.- +.+.+.
T Consensus 25 ~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~ 104 (327)
T 3utn_X 25 PLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDA 104 (327)
T ss_dssp CSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHH
T ss_pred ccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHH
Confidence 334569999999999753 358899996 23466 78999999999988765431 233333
Q ss_pred hhhhhhhcCCCCCCCCeEEEEcCCCh-hHHHHHHHHHHcCCCCEEEccccHHHHhhCcCC
Q 013384 381 MKEKEEHRGSNASSGSNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 439 (444)
Q Consensus 381 ~~~~~~~~~~~~~~~~~Ivv~C~~G~-~S~~aa~~L~~~G~~~v~~l~GG~~aW~~~~~p 439 (444)
+.. .+.+++++||||...|. .|.+++|+|+.+|+++|++|+|| .+|.+++.|
T Consensus 105 l~~------lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p 157 (327)
T 3utn_X 105 MSN------LGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYP 157 (327)
T ss_dssp HHH------TTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCC
T ss_pred HHH------cCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCC
Confidence 322 44577899999998765 68999999999999999999877 899998765
No 78
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.85 E-value=1.4e-09 Score=112.59 Aligned_cols=79 Identities=11% Similarity=0.203 Sum_probs=59.7
Q ss_pred CCcEEEEecCcccccccCCCCceecCchh-hhhhhhhhHHHhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcC
Q 013384 341 EAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLG 419 (444)
Q Consensus 341 ~~~~lIDVR~~~ef~~ghIpgAiniP~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv~C~~G~~S~~aa~~L~~~G 419 (444)
++.+|||+|++.+|..||||||+|+|+.. +..+. .++. +++++||+||. +.++.++++.|+.+|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~----~~~~----------~~~~~vvly~~-~~~a~~a~~~L~~~G 359 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQI----GWYL----------NYDQEINLIGD-YHLVSKATHTLQLIG 359 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHH----TTTC----------CTTSCEEEESC-HHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHH----Hhcc----------CCCCeEEEEEC-CchHHHHHHHhhhhh
Confidence 45899999999999999999999999874 33222 2111 33589999999 668999999999999
Q ss_pred CCCEEE-ccccHHHHh
Q 013384 420 FTSARD-IIGGLESWA 434 (444)
Q Consensus 420 ~~~v~~-l~GG~~aW~ 434 (444)
|++|+. +.|+...|.
T Consensus 360 ~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 360 YDDIAGYQLPQSKIQT 375 (466)
T ss_dssp CCCEEEEECCC-----
T ss_pred cccccccccCcccccH
Confidence 999987 566655443
No 79
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.82 E-value=3.6e-05 Score=62.84 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=66.7
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCCh
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~~ 171 (444)
..+|+|+|+|++|..++..|...|..++.++|.+.-....+. .+.+. .+...+.. +...+.++++|+||.|+..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--~~~~~--~~~~d~~~~~~~~~~~~~~d~vi~~~~~- 79 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--RMGVA--TKQVDAKDEAGLAKALGGFDAVISAAPF- 79 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--TTTCE--EEECCTTCHHHHHHHTTTCSEEEECSCG-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--hCCCc--EEEecCCCHHHHHHHHcCCCEEEECCCc-
Confidence 468999999999999999999999778999987542222111 22333 33333333 4455677899999999954
Q ss_pred HhHHHHHHHHHHcCCcEEEEc
Q 013384 172 PSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~p~i~~~ 192 (444)
.....+.+.|.+.++++++.+
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 80 FLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp GGHHHHHHHHHHTTCEEECCC
T ss_pred hhhHHHHHHHHHhCCCEEEec
Confidence 344567778889999888643
No 80
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.78 E-value=2.4e-05 Score=72.63 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=68.4
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|++++|+|||.|.+|...++.|..+|. ++++|+.+.-+ .+..+...-.++.....+. .+.+.++|+||.|||
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~--~l~~l~~~~~i~~i~~~~~----~~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA--EINEWEAKGQLRVKRKKVG----EEDLLNVFFIVVATN 100 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH--HHHHHHHTTSCEEECSCCC----GGGSSSCSEEEECCC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH--HHHHHHHcCCcEEEECCCC----HhHhCCCCEEEECCC
Confidence 7899999999999999999999999996 89999876321 1222111122344444433 234678999999999
Q ss_pred ChHhHHHHHHHHHHcCCcEE
Q 013384 170 NAPSRYMISDCCVVLGKPLV 189 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~i 189 (444)
+++.-..+...|. .++|+-
T Consensus 101 d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 101 DQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp CTHHHHHHHHHSC-TTCEEE
T ss_pred CHHHHHHHHHHHh-CCCEEE
Confidence 9999889998887 888743
No 81
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.75 E-value=0.00019 Score=62.23 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=64.1
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhh-cCCCcEEEE
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEI-LSQYEIVVD 166 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~-~~~~DvVi~ 166 (444)
.++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.. ..... .+...... +..... +.++|+||.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~-~~g~~--~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS-EFSGF--TVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT-TCCSE--EEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh-cCCCc--EEEecCCCHHHHHHcCcccCCEEEE
Confidence 45667899999999999999999999997 89999876433222220 11222 22222222 112222 578999999
Q ss_pred ccCChHhHHHHHHHHHH-cCCcEEEE
Q 013384 167 ATDNAPSRYMISDCCVV-LGKPLVSG 191 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~-~~~p~i~~ 191 (444)
|+.+......+...+.. .+...+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 91 FTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp CSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 99998877777777766 55544433
No 82
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.56 E-value=4.2e-05 Score=73.67 Aligned_cols=76 Identities=22% Similarity=0.347 Sum_probs=56.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.+++++|+|+|+||+|..++..|+..|+++|+|++.+.-....+.+ ..+.+.+..+. .++..+.+.++|+||
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~----~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD----ARGIEDVIAAADGVV 199 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC----STTHHHHHHHSSEEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC----HHHHHHHHhcCCEEE
Confidence 4678999999999999999999999999999999876543333322 34555555543 134455667899999
Q ss_pred EccC
Q 013384 166 DATD 169 (444)
Q Consensus 166 ~~~D 169 (444)
+||-
T Consensus 200 naTp 203 (283)
T 3jyo_A 200 NATP 203 (283)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 9984
No 83
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.53 E-value=0.00041 Score=58.42 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=60.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhh-cCCCcEEEEc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEI-LSQYEIVVDA 167 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~-~~~~DvVi~~ 167 (444)
+++.++|+|+|+|.+|..+++.|...|. ++.++|.+.-....+... .. ..+...... +...+. +.++|+||.|
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~--~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY--AT--HAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT--CS--EEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh--CC--EEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 4567889999999999999999999996 688998764322222211 11 122222222 222222 5789999999
Q ss_pred cCCh-HhHHHHHHHHHHcCCcEE
Q 013384 168 TDNA-PSRYMISDCCVVLGKPLV 189 (444)
Q Consensus 168 ~D~~-~~r~~i~~~~~~~~~p~i 189 (444)
+.+. .....+...++..+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~i 100 (144)
T 2hmt_A 78 IGANIQASTLTTLLLKELDIPNI 100 (144)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCchHHHHHHHHHHHHcCCCeE
Confidence 9875 555566677777665433
No 84
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.45 E-value=0.00015 Score=72.26 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=66.6
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCC-cccHHhhcCCCcEEEEccCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALR-TSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~D~ 170 (444)
++.||+|+|+|.+|+.++++|+.. ..++++|-+. .++.++.+.+.. ....+. .+...++++++|+||+|+..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~---~~~~~~~~~~~~--~~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN---ENLEKVKEFATP--LKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH---HHHHHHTTTSEE--EECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCH---HHHHHHhccCCc--EEEecCCHHHHHHHHhCCCEEEEecCC
Confidence 345799999999999999999753 5788887543 334444444332 222333 24456778999999999876
Q ss_pred hHhHHHHHHHHHHcCCcEEEEc
Q 013384 171 APSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i~~~ 192 (444)
. .-..+.+.|.+.++.+++.+
T Consensus 88 ~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 88 F-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp G-GHHHHHHHHHHHTCEEEECC
T ss_pred c-ccchHHHHHHhcCcceEeee
Confidence 4 45678899999999999864
No 85
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.37 E-value=0.00059 Score=57.81 Aligned_cols=96 Identities=13% Similarity=0.047 Sum_probs=63.7
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHh--hcCCCcEEEEcc
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALE--ILSQYEIVVDAT 168 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~--~~~~~DvVi~~~ 168 (444)
++..+|+|+|+|.+|..+++.|...|. ++.++|.|.-....+. ... +..+....+...... -+.++|+||.++
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~--~~~--~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLE--DEG--FDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHH--HTT--CEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHH--HCC--CcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 345789999999999999999999997 7889997643211111 112 223333444332222 146899999999
Q ss_pred CChHhHHHHHHHHHHcCCcEEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~ 191 (444)
++......+...++..+.+.|.+
T Consensus 79 ~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 79 SDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp SCHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCHHHHHHHHHHHHHhCCceEEE
Confidence 98887777777777766554433
No 86
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.29 E-value=0.00038 Score=66.47 Aligned_cols=95 Identities=25% Similarity=0.371 Sum_probs=68.4
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccc-----cccc-------------c-ccC-----cceE-EE
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVEL-----NNMH-------------R-INS-----TVHI-IE 144 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~-----sNl~-------------R-lnp-----~~~v-~~ 144 (444)
.|++++|+|||+|.+|...+..|...|. ++++||.+.-+. ..+. + +|+ .-.+ ..
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 88 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEY 88 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEE
Confidence 6789999999999999999999999995 799999876321 1111 0 111 1123 44
Q ss_pred EeecCCcccHHhhcC------CCcEEEEccCChHhHHHHHHHHHHc---CCcEE
Q 013384 145 HREALRTSNALEILS------QYEIVVDATDNAPSRYMISDCCVVL---GKPLV 189 (444)
Q Consensus 145 ~~~~~~~~~~~~~~~------~~DvVi~~~D~~~~r~~i~~~~~~~---~~p~i 189 (444)
+...+.+ +.+. .+|+||.|+|+.+....+...|+.. ++|+-
T Consensus 89 i~~~~~~----~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 89 IRSDFKD----EYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp ECSSCCG----GGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EcCCCCH----HHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 4443332 2234 8999999999998888999999998 87663
No 87
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.25 E-value=0.00014 Score=70.96 Aligned_cols=78 Identities=17% Similarity=0.273 Sum_probs=52.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC---ccccccccc-cc--CcceEEEEeecCCc-ccHHhhcCCCc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD---VVELNNMHR-IN--STVHIIEHREALRT-SNALEILSQYE 162 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D---~V~~sNl~R-ln--p~~~v~~~~~~~~~-~~~~~~~~~~D 162 (444)
.+++++|+|+|+||+|..++..|+..|+.+|+|++.+ .-....+.. ++ ..+.+.... +.. +...+.+.++|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~--~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFD--IEDHEQLRKEIAESV 228 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEE--TTCHHHHHHHHHTCS
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEec--cchHHHHHhhhcCCC
Confidence 3678999999999999999999999999999999876 211111211 11 113333332 221 22345567899
Q ss_pred EEEEccC
Q 013384 163 IVVDATD 169 (444)
Q Consensus 163 vVi~~~D 169 (444)
+||+||-
T Consensus 229 iIINaTp 235 (315)
T 3tnl_A 229 IFTNATG 235 (315)
T ss_dssp EEEECSS
T ss_pred EEEECcc
Confidence 9999884
No 88
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.22 E-value=0.00077 Score=58.63 Aligned_cols=82 Identities=10% Similarity=0.153 Sum_probs=50.9
Q ss_pred cCHHHHHHHHhcCCCcEEEEecCcccc-------------cccCCCCceecCchhhhh---hhhhhHHHhhhhhhhcCCC
Q 013384 328 ISSKEYKEKVVNGEAHILVDVRPAHHF-------------RIVSLPNSINIPLSDLES---RLPEISSAMKEKEEHRGSN 391 (444)
Q Consensus 328 Is~~el~~~l~~~~~~~lIDVR~~~ef-------------~~ghIpgAiniP~~~l~~---~~~~l~~~~~~~~~~~~~~ 391 (444)
++++++..+.+.+- ..|||+|++.|. ...+|+|.+|+|+....- .+..+...+.+
T Consensus 30 ~~~~d~~~L~~~Gi-~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~~~~~~~~~~~l~~-------- 100 (156)
T 2f46_A 30 LTKADAEQIAQLGI-KTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQ-------- 100 (156)
T ss_dssp CCGGGHHHHHHHTC-CEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHHHHHHHHHT--------
T ss_pred CCHHHHHHHHHCCC-CEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCCHHHHHHHHHHHHh--------
Confidence 56777776655542 479999987662 223698899999864311 12222222221
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHH-HHcCC
Q 013384 392 ASSGSNLYVVCRRGNDSQRAVQAL-HKLGF 420 (444)
Q Consensus 392 ~~~~~~Ivv~C~~G~~S~~aa~~L-~~~G~ 420 (444)
.+.||+|+|+.|.||..++..+ ...|.
T Consensus 101 --~~~pVlvHC~sG~Rs~~l~al~l~~~g~ 128 (156)
T 2f46_A 101 --AEYPVLAYCRTGTRCSLLWGFRRAAEGM 128 (156)
T ss_dssp --SCSSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred --CCCCEEEECCCCCCHHHHHHHHHHHcCC
Confidence 2479999999999887554443 33454
No 89
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.20 E-value=0.0012 Score=60.72 Aligned_cols=101 Identities=13% Similarity=0.016 Sum_probs=63.0
Q ss_pred HHHhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceE-EEEeecCCcccHHhhcCCCcEE
Q 013384 87 GQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHI-IEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 87 ~q~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v-~~~~~~~~~~~~~~~~~~~DvV 164 (444)
.+..|++++|+|.|+ |++|.++++.|+..|. ++.+++.+.-....+ ..+. + +.+...++ +...+.+.+.|+|
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~--~~~~--~~~~~~~Dl~-~~~~~~~~~~D~v 88 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPEL--RERG--ASDIVVANLE-EDFSHAFASIDAV 88 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHH--HHTT--CSEEEECCTT-SCCGGGGTTCSEE
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHH--HhCC--CceEEEcccH-HHHHHHHcCCCEE
Confidence 445788999999997 8899999999999996 788877653322111 1122 3 44445555 5667778899999
Q ss_pred EEccCCh-------------HhHHHHHHHHHHcCC-cEEEEcc
Q 013384 165 VDATDNA-------------PSRYMISDCCVVLGK-PLVSGAA 193 (444)
Q Consensus 165 i~~~D~~-------------~~r~~i~~~~~~~~~-p~i~~~~ 193 (444)
|.+.... ..-..+.++|.+.+. .+|+.+.
T Consensus 89 i~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 89 VFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp EECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 9886532 122345566666654 4666554
No 90
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=97.15 E-value=0.00082 Score=68.99 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=69.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|++++|+|||.|.+|...++.|..+|. +++++|.+.-+ .+..+...-.++.+...+.+ +.+.++|+||.++|
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~--~~~~l~~~~~i~~~~~~~~~----~~l~~~~lVi~at~ 81 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP--QFTVWANEGMLTLVEGPFDE----TLLDSCWLAIAATD 81 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH--HHHHHHTTTSCEEEESSCCG----GGGTTCSEEEECCS
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH--HHHHHHhcCCEEEEECCCCc----cccCCccEEEEcCC
Confidence 5789999999999999999999999995 89999986332 12222111234444444432 33568999999999
Q ss_pred ChHhHHHHHHHHHHcCCcE
Q 013384 170 NAPSRYMISDCCVVLGKPL 188 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~ 188 (444)
++.....+...|++.++|+
T Consensus 82 ~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 82 DDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp CHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHcCCEE
Confidence 9988888999999999986
No 91
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.13 E-value=0.0011 Score=55.42 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=57.2
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCccc-HH-hhcCCCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSN-AL-EILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~-~~-~~~~~~DvVi~~~D~~ 171 (444)
.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.+ ...+ ..+........ .. ..+.++|+||.|+.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~-~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASA-EIDA--LVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH-HCSS--EEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH-hcCc--EEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 579999999999999999999995 68999875432222211 1122 22222222211 12 2257899999999887
Q ss_pred HhHHHHHHHHHHcCC
Q 013384 172 PSRYMISDCCVVLGK 186 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~ 186 (444)
.....+...+...+.
T Consensus 81 ~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 81 EVNLMSSLLAKSYGI 95 (140)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHcCC
Confidence 666666666666553
No 92
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.11 E-value=0.0012 Score=67.53 Aligned_cols=101 Identities=12% Similarity=0.211 Sum_probs=72.1
Q ss_pred cCcEEEECCCccHHHHHHHHHHc-CC--CcEEEeeCCcccccccccccCcceEEEEeecCCcccH----HhhcCCCcEEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAAC-GV--GRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA----LEILSQYEIVV 165 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~-Gv--g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~----~~~~~~~DvVi 165 (444)
..+|+|+|+|++|+.++..|++. ++ ..|+++|.+.... ++...- . +......++.+|. ..++++.|+||
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~~-g--~~~~~~~Vdadnv~~~l~aLl~~~DvVI 88 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQY-G--VSFKLQQITPQNYLEVIGSTLEENDFLI 88 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHHH-T--CEEEECCCCTTTHHHHTGGGCCTTCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhhc-C--CceeEEeccchhHHHHHHHHhcCCCEEE
Confidence 56899999999999999999986 45 5999999887653 322211 2 2344455655543 34666679999
Q ss_pred EccCChHhHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 166 DATDNAPSRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
++.... .-..|-++|.+.|+-+|+....-+.+
T Consensus 89 N~s~~~-~~l~Im~acleaGv~YlDTa~E~~~p 120 (480)
T 2ph5_A 89 DVSIGI-SSLALIILCNQKGALYINAATEPWKE 120 (480)
T ss_dssp ECCSSS-CHHHHHHHHHHHTCEEEESSCCCCCC
T ss_pred ECCccc-cCHHHHHHHHHcCCCEEECCCCcccc
Confidence 977654 34577889999999999987644444
No 93
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.01 E-value=0.002 Score=55.41 Aligned_cols=90 Identities=11% Similarity=0.162 Sum_probs=60.9
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccc-cccccc-ccCcceEEEEeecCCccc-HHhh-cCCCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVE-LNNMHR-INSTVHIIEHREALRTSN-ALEI-LSQYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~-~sNl~R-lnp~~~v~~~~~~~~~~~-~~~~-~~~~DvVi~~ 167 (444)
++.+|+|+|+|.+|..+++.|...|. .++++|.|.-+ ...+.. ....+ ..+....+... ..+. +.++|+||.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~--~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNA--DVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTC--EEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCC--eEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 46789999999999999999999995 79999986211 011111 11122 33334444322 2232 6899999999
Q ss_pred cCChHhHHHHHHHHHHc
Q 013384 168 TDNAPSRYMISDCCVVL 184 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~~~ 184 (444)
+++...-..+...++..
T Consensus 79 ~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 79 SDNDADNAFVVLSAKDM 95 (153)
T ss_dssp SSCHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHH
Confidence 99987777777777765
No 94
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.92 E-value=0.00091 Score=66.63 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=64.5
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCC-cccHHhhcCCCcEEEEccC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALR-TSNALEILSQYEIVVDATD 169 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~D 169 (444)
=++++|+|+|+|++|..++.+|++. .++++.|.+.-. +.++..... .....+. .+...++++++|+||+|+.
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~~~---a~~la~~~~--~~~~d~~~~~~l~~ll~~~DvVIn~~P 86 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNNEN---LEKVKEFAT--PLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHH---HHHHTTTSE--EEECCTTCHHHHHHHHTTCSCEEECCC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCHHH---HHHHHhhCC--eEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 3678999999999999999999988 689998865322 222222222 1112222 2455677889999999976
Q ss_pred ChHhHHHHHHHHHHcCCcEEEEc
Q 013384 170 NAPSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~i~~~ 192 (444)
.. .-..+...|.+.++.+++.+
T Consensus 87 ~~-~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 87 GF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HH-HHHHHHHHHHHTTCCEEECC
T ss_pred hh-hhHHHHHHHHHhCCeEEEcc
Confidence 43 33457788999999999854
No 95
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.92 E-value=0.00036 Score=67.95 Aligned_cols=79 Identities=15% Similarity=0.268 Sum_probs=51.3
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC---ccccccccc-ccC--cceEEEEeecCCc-ccHHhhcCCCc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD---VVELNNMHR-INS--TVHIIEHREALRT-SNALEILSQYE 162 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D---~V~~sNl~R-lnp--~~~v~~~~~~~~~-~~~~~~~~~~D 162 (444)
.+++++|+|+|+||.|..++..|+..|+.+|+|++.+ .-....+.. ++. ...+..+. +.. +...+.+.++|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~--~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTD--LADQHAFTEALASAD 222 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEE--TTCHHHHHHHHHHCS
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEec--hHhhhhhHhhccCce
Confidence 3678999999999999999999999999999999876 221112211 111 12233332 111 01134466799
Q ss_pred EEEEccCC
Q 013384 163 IVVDATDN 170 (444)
Q Consensus 163 vVi~~~D~ 170 (444)
+||+||--
T Consensus 223 iIINaTp~ 230 (312)
T 3t4e_A 223 ILTNGTKV 230 (312)
T ss_dssp EEEECSST
T ss_pred EEEECCcC
Confidence 99988853
No 96
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.84 E-value=0.0036 Score=55.43 Aligned_cols=91 Identities=13% Similarity=0.017 Sum_probs=59.7
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhh--cCCCcEEE
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEI--LSQYEIVV 165 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~--~~~~DvVi 165 (444)
.+.+.+|+|+|+|.+|..+++.|... |. +++++|.|.-....+.. ..+. .+....+. +...+. +.++|+||
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~--~g~~--~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS--EGRN--VISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH--TTCC--EEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH--CCCC--EEEcCCCCHHHHHhccCCCCCCEEE
Confidence 35678999999999999999999998 86 78899886532222111 1222 22222222 222333 57899999
Q ss_pred EccCChHhHHHHHHHHHHcC
Q 013384 166 DATDNAPSRYMISDCCVVLG 185 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~~~ 185 (444)
.|+.+...-..+-..++..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 111 LAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp ECCSSHHHHHHHHHHHHHTT
T ss_pred EeCCChHHHHHHHHHHHHHC
Confidence 99998766555555666554
No 97
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.81 E-value=0.0013 Score=66.32 Aligned_cols=97 Identities=18% Similarity=0.308 Sum_probs=67.8
Q ss_pred CcEEEECCCccHHHHHHHHHHcC-C-CcEEEeeCCccccccccc-ccC--cceEEEEeecCCc-ccHHhhcCC--CcEEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACG-V-GRLGIVDHDVVELNNMHR-INS--TVHIIEHREALRT-SNALEILSQ--YEIVV 165 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~G-v-g~i~lvD~D~V~~sNl~R-lnp--~~~v~~~~~~~~~-~~~~~~~~~--~DvVi 165 (444)
++|+|+|+|++|..++..|+..| + .++.++|.+.-....+.. +.. ..++......++. +...+++++ .|+||
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 47999999999999999999988 4 689999876543333322 111 0123444444443 445566666 89999
Q ss_pred EccCChHhHHHHHHHHHHcCCcEEEE
Q 013384 166 DATDNAPSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~~~~p~i~~ 191 (444)
+|+... ....+.+.|.+.++.+++.
T Consensus 82 n~ag~~-~~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 82 NIALPY-QDLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECSCGG-GHHHHHHHHHHHTCCEEES
T ss_pred ECCCcc-cChHHHHHHHHhCCCEEEe
Confidence 998754 3457778999999999974
No 98
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.78 E-value=0.0028 Score=57.96 Aligned_cols=92 Identities=12% Similarity=0.099 Sum_probs=62.0
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCccc-HHh-hcCCCcEEEEccCChH
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSN-ALE-ILSQYEIVVDATDNAP 172 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~-~~~-~~~~~DvVi~~~D~~~ 172 (444)
+|+|+|+|.+|..+++.|...|. .++++|.|.-....+.+ ...+..+....+... ..+ -+.++|+||.++++..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAK---KLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH---HSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---HcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 69999999999999999999997 78999976432222211 112233444444332 222 2678999999999988
Q ss_pred hHHHHHHHHHH-cCCcEEE
Q 013384 173 SRYMISDCCVV-LGKPLVS 190 (444)
Q Consensus 173 ~r~~i~~~~~~-~~~p~i~ 190 (444)
....+...++. .+.+.+-
T Consensus 78 ~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 78 VNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp HHHHHHHHHHHTSCCCEEE
T ss_pred HHHHHHHHHHHHcCCCeEE
Confidence 77777777765 4554443
No 99
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.77 E-value=0.00069 Score=66.08 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=65.0
Q ss_pred CCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCc
Q 013384 83 FGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYE 162 (444)
Q Consensus 83 ~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~D 162 (444)
|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|.+.-.... +..+. ...+..++++.+|
T Consensus 129 W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~---------~~~~~---~~~~l~ell~~aD 195 (315)
T 3pp8_A 129 WKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRKSWPG---------VESYV---GREELRAFLNQTR 195 (315)
T ss_dssp CCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCCCCTT---------CEEEE---SHHHHHHHHHTCS
T ss_pred cCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCchhhhh---------hhhhc---ccCCHHHHHhhCC
Confidence 53333457899999999999999999999999987 67777754321111 11111 1145677889999
Q ss_pred EEEEccC-ChHhHHHHHHHHHHc---CCcEEEEc
Q 013384 163 IVVDATD-NAPSRYMISDCCVVL---GKPLVSGA 192 (444)
Q Consensus 163 vVi~~~D-~~~~r~~i~~~~~~~---~~p~i~~~ 192 (444)
+|+.++- ++.++..++...... +.-+|+.+
T Consensus 196 iV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 196 VLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp EEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred EEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 9998875 667887776544332 33477765
No 100
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.74 E-value=0.0013 Score=62.88 Aligned_cols=141 Identities=21% Similarity=0.265 Sum_probs=78.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++++|+|+|+||.|..++..|+..|+.+++|++.+.-....+.+ +.. ..+.... + ++... .++|+||+||
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~~--~--~~l~~--~~~DivInaT 189 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-SRLRISR--Y--EALEG--QSFDIVVNAT 189 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-TTEEEEC--S--GGGTT--CCCSEEEECS
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-CCeeEee--H--HHhcc--cCCCEEEECC
Confidence 3578899999999999999999999999999998765432222222 221 1233321 1 11111 6899999998
Q ss_pred CChHhHHHHHHHHHHcCCcEEEEcccCCcceEEEEeCCCCCceeecCCCCCCCccCCcccCCCcccchhHH-HHHHHHHH
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGI-IGCLQALE 247 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~~~~~~~~~C~~C~~~~~~~~~~~~~c~~~~~~~~~~~i-~g~l~a~e 247 (444)
-.... ...|.+....+ ....-+++..|... +..-...+...|..-.+.|+ +-..||.+
T Consensus 190 p~gm~----------~~~~~i~~~~l----------~~~~~V~DlvY~P~-~T~ll~~A~~~G~~~~~~Gl~ML~~Qa~~ 248 (272)
T 3pwz_A 190 SASLT----------ADLPPLPADVL----------GEAALAYELAYGKG-LTPFLRLAREQGQARLADGVGMLVEQAAE 248 (272)
T ss_dssp SGGGG----------TCCCCCCGGGG----------TTCSEEEESSCSCC-SCHHHHHHHHHSCCEEECTHHHHHHHHHH
T ss_pred CCCCC----------CCCCCCCHHHh----------CcCCEEEEeecCCC-CCHHHHHHHHCCCCEEECCHHHHHHHHHH
Confidence 54321 11122211111 12344566666421 11111112222322122222 55678889
Q ss_pred HHHHHhcCCCC
Q 013384 248 AIKVASAVGEP 258 (444)
Q Consensus 248 ~lk~l~g~~~~ 258 (444)
++++.+|...+
T Consensus 249 ~f~lwtg~~~~ 259 (272)
T 3pwz_A 249 AFAWWRGVRPD 259 (272)
T ss_dssp HHHHHHSCCCC
T ss_pred HHHHHhCCCCC
Confidence 99999997654
No 101
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.73 E-value=0.0011 Score=62.68 Aligned_cols=69 Identities=19% Similarity=0.350 Sum_probs=49.3
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+++ +|+|+|+||.|..++..|+..|+.+|+++|.+.-....|. ..... . ..++..+.+.++|+||+||-
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la---~~~~~--~----~~~~~~~~~~~aDiVInatp 175 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALD---FPVKI--F----SLDQLDEVVKKAKSLFNTTS 175 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC---SSCEE--E----EGGGHHHHHHTCSEEEECSS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---HHccc--C----CHHHHHhhhcCCCEEEECCC
Confidence 567 9999999999999999999999999999987543222221 12211 1 11334556788999999884
No 102
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.72 E-value=0.00097 Score=63.54 Aligned_cols=71 Identities=21% Similarity=0.376 Sum_probs=49.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.+++++|+|+|+||.+..++..|+..|+.+|+|++.+.-....|.. ..+...+.. . ...+.++|+||
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~---~------~~~~~~~dlii 192 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVST---Q------FSGLEDFDLVA 192 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEES---C------CSCSTTCSEEE
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehh---h------hhhhhcccccc
Confidence 3577899999999999999999999999999998765433322222 223222211 1 11235799999
Q ss_pred EccC
Q 013384 166 DATD 169 (444)
Q Consensus 166 ~~~D 169 (444)
+||-
T Consensus 193 NaTp 196 (269)
T 3tum_A 193 NASP 196 (269)
T ss_dssp ECSS
T ss_pred cCCc
Confidence 9874
No 103
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.70 E-value=0.00083 Score=64.95 Aligned_cols=77 Identities=23% Similarity=0.330 Sum_probs=52.8
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++++|+|+|+|++|..++..|+..|+.+++++|.+.-....+.. +..... ... ..++..+.+.++|+||+|+
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~----~~~~~~~~~~~aDivIn~t 212 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYF----SLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEE----CHHHHHHTGGGCSEEEECS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-cee----eHHHHHhhhccCCEEEECC
Confidence 4678899999999999999999999999999999876432222222 111110 111 1123445678899999998
Q ss_pred CCh
Q 013384 169 DNA 171 (444)
Q Consensus 169 D~~ 171 (444)
...
T Consensus 213 ~~~ 215 (297)
T 2egg_A 213 SVG 215 (297)
T ss_dssp CTT
T ss_pred CCC
Confidence 754
No 104
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.65 E-value=0.0011 Score=64.77 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=68.3
Q ss_pred hccccCCCCCHH-HHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCccc
Q 013384 75 SRHLLLPSFGVE-GQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSN 153 (444)
Q Consensus 75 ~Rq~~l~~~g~~-~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~ 153 (444)
.|+.+--.|... ....|.+++|.|||+|.+|..+|+.|...|. ++..+|...-....+. .. ....+
T Consensus 118 ~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~------~~------~~~~~ 184 (324)
T 3evt_A 118 LNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTGHPADHFH------ET------VAFTA 184 (324)
T ss_dssp HHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCCCCTTCS------EE------EEGGG
T ss_pred HHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCCcchhHhHh------hc------cccCC
Confidence 444443345433 2457999999999999999999999999997 6777775432211110 01 11234
Q ss_pred HHhhcCCCcEEEEccC-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 154 ALEILSQYEIVVDATD-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 154 ~~~~~~~~DvVi~~~D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
..++++.+|+|+.++- ++.++..++..... .+.-+|+.+
T Consensus 185 l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 227 (324)
T 3evt_A 185 TADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIG 227 (324)
T ss_dssp CHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECS
T ss_pred HHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcC
Confidence 5677889999998875 56777776654433 344577765
No 105
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.63 E-value=0.0065 Score=59.75 Aligned_cols=89 Identities=13% Similarity=0.170 Sum_probs=55.9
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. ..... ..+..++++.+|+|+.++
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~---------~~~~~------~~sl~ell~~aDvVil~v 230 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLSG---------VDWIA------HQSPVDLARDSDVLAVCV 230 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCTT---------SCCEE------CSSHHHHHHTCSEEEECC
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCcccc---------cCcee------cCCHHHHHhcCCEEEEeC
Confidence 47899999999999999999999998887 677776543210 01110 135677889999999887
Q ss_pred C-ChHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 169 D-NAPSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 169 D-~~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
- ++.++..+++... +.+.-+|+.+-
T Consensus 231 P~t~~t~~li~~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 231 AASAATQNIVDASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp ----------CHHHHHHTTTTCEEEECSC
T ss_pred CCCHHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 5 5677777754433 23455777653
No 106
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.62 E-value=0.0015 Score=62.56 Aligned_cols=75 Identities=16% Similarity=0.294 Sum_probs=51.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++++|+|+|+||.|..++..|+..|+.+++|++.+.-....+.+ +.....+..... .++..++|+||+||
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~-------~~l~~~aDiIInaT 195 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAF-------EQLKQSYDVIINST 195 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-------GGCCSCEEEEEECS
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH-------HHhcCCCCEEEEcC
Confidence 3578899999999999999999999999999999876433222222 222112333211 11226899999998
Q ss_pred CCh
Q 013384 169 DNA 171 (444)
Q Consensus 169 D~~ 171 (444)
-..
T Consensus 196 p~g 198 (281)
T 3o8q_A 196 SAS 198 (281)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 107
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.60 E-value=0.0046 Score=52.38 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=57.4
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHh--hcCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALE--ILSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~--~~~~~DvVi~~~D~ 170 (444)
..+|+|+|+|.+|..+++.|...|. .++++|.|.-....+.. ..+ ..+....+...... -+.++|+||.++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~--~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE--RGV--RAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH--TTC--EEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH--cCC--CEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 3589999999999999999999997 89999987543222221 222 23333333332222 24689999999998
Q ss_pred hHhHHHHHHHHHHc
Q 013384 171 APSRYMISDCCVVL 184 (444)
Q Consensus 171 ~~~r~~i~~~~~~~ 184 (444)
...-..+...+++.
T Consensus 82 ~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 82 GYEAGEIVASARAK 95 (140)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 76555444455554
No 108
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.59 E-value=0.0025 Score=60.90 Aligned_cols=72 Identities=21% Similarity=0.315 Sum_probs=50.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.+++++|+|+|+||.|..++..|+..|+.++++++.+.-....+.. .+. .. ..++..+.+.++|+||+||.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~---~~~--~~----~~~~~~~~~~~aDiVInaTp 184 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL---NIN--KI----NLSHAESHLDEFDIIINTTP 184 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS---CCE--EE----CHHHHHHTGGGCSEEEECCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH---hcc--cc----cHhhHHHHhcCCCEEEECcc
Confidence 4789999999999999999999999999999999876433222221 111 11 11234455678999998885
Q ss_pred C
Q 013384 170 N 170 (444)
Q Consensus 170 ~ 170 (444)
.
T Consensus 185 ~ 185 (277)
T 3don_A 185 A 185 (277)
T ss_dssp -
T ss_pred C
Confidence 4
No 109
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.54 E-value=0.001 Score=64.11 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=61.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.... . . ..++..++++.+|+|+.++
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-------~--~------~~~~l~ell~~aDiV~l~~ 181 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNV-------D--V------ISESPADLFRQSDFVLIAI 181 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTC-------S--E------ECSSHHHHHHHCSEEEECC
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccc-------c--c------ccCChHHHhhccCeEEEEe
Confidence 46889999999999999999999999997 67777754322100 0 0 1135667888999999887
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
- ++.++..++..... .+.-+|+.+
T Consensus 182 P~t~~t~~li~~~~l~~mk~gailIN~a 209 (290)
T 3gvx_A 182 PLTDKTRGMVNSRLLANARKNLTIVNVA 209 (290)
T ss_dssp CCCTTTTTCBSHHHHTTCCTTCEEEECS
T ss_pred eccccchhhhhHHHHhhhhcCceEEEee
Confidence 6 56677666554332 344577765
No 110
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.48 E-value=0.0025 Score=60.77 Aligned_cols=72 Identities=18% Similarity=0.319 Sum_probs=50.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.+++++|+|+|+|++|..++..|...|+ +++++|.+.-....+.. ...+... .+..+.++++|+||.|+-
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~~~~~~~l~~---~~g~~~~------~~~~~~~~~aDiVi~atp 195 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRTKEKAIKLAQ---KFPLEVV------NSPEEVIDKVQVIVNTTS 195 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSHHHHHHHTT---TSCEEEC------SCGGGTGGGCSEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHH---HcCCeee------hhHHhhhcCCCEEEEeCC
Confidence 4678999999999999999999999999 99999876422111111 1122221 133456678999999986
Q ss_pred Ch
Q 013384 170 NA 171 (444)
Q Consensus 170 ~~ 171 (444)
..
T Consensus 196 ~~ 197 (275)
T 2hk9_A 196 VG 197 (275)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 111
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.0039 Score=64.13 Aligned_cols=98 Identities=12% Similarity=0.150 Sum_probs=61.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~ 168 (444)
.++.++|+|+|+|++|..++..|+..|--+++++|.+.-....+... ..+ ......+.+ +...+.++++|+||+|+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~~~--~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-SGS--KAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-GTC--EEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-cCC--cEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 45677899999999999999999998434799998764222222111 122 222223332 23456678999999998
Q ss_pred CChHhHHHHHHHHHHcCCcEEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~ 191 (444)
.... ...+.+.|...++.+++.
T Consensus 97 p~~~-~~~v~~a~l~~g~~vvd~ 118 (467)
T 2axq_A 97 PYTF-HPNVVKSAIRTKTDVVTS 118 (467)
T ss_dssp CGGG-HHHHHHHHHHHTCEEEEC
T ss_pred chhh-hHHHHHHHHhcCCEEEEe
Confidence 7542 223556666777766654
No 112
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.40 E-value=0.019 Score=50.89 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=62.5
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCC
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~ 170 (444)
+++|+|.|+ |++|..+++.|+..| -++.+++.+.-....+ ..+ .++.+...++. +...+.++++|+||.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~--~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSE--GPR--PAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCSS--SCC--CSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcccc--cCC--ceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 368999997 889999999999999 4788887654322111 122 23444445543 4456778899999988653
Q ss_pred hH----------hHHHHHHHHHHcCC-cEEEEcccC
Q 013384 171 AP----------SRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 171 ~~----------~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
.. .-..+-++|.+.+. .+|..+..+
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~ 113 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence 22 22345556666665 466665443
No 113
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.39 E-value=0.0084 Score=58.27 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=65.9
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCC-cEEEeeCCccc--ccccccccCcceEEEEeecCCc-ccHHhhcCC--CcE
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVG-RLGIVDHDVVE--LNNMHRINSTVHIIEHREALRT-SNALEILSQ--YEI 163 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg-~i~lvD~D~V~--~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~--~Dv 163 (444)
++..+|+|.|+ |.+|+.+++.|+..|.. ++..+|..... ..++..+.....++.+...+.. +...+++++ +|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 45678999997 77999999999999942 45555543311 1222223333456666666654 344556665 999
Q ss_pred EEEccCChH-----------------hHHHHHHHHHHcCCc-EEEEcccCCcc
Q 013384 164 VVDATDNAP-----------------SRYMISDCCVVLGKP-LVSGAALGLEG 198 (444)
Q Consensus 164 Vi~~~D~~~-----------------~r~~i~~~~~~~~~p-~i~~~~~g~~G 198 (444)
||.+..... .-..+.++|.+.+++ +|+.+..+..|
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 998864221 113456677777776 77776554444
No 114
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.31 E-value=0.01 Score=56.04 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=61.8
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCC-CcEEEEccC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQ-YEIVVDATD 169 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~-~DvVi~~~D 169 (444)
+.++|+|.|+|.+|+.+++.|...|. +++.++.+.-. +.+.++ .+...+.. +...++++. +|+||.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~------~~~~~~--~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP------MPAGVQ--TLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC------CCTTCC--EEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc------cccCCc--eEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 35689999999999999999999996 67776654211 223333 33344443 333445555 999998752
Q ss_pred ------------ChHhHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 170 ------------NAPSRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 170 ------------~~~~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
|...-..+-++|.+.++ .+|+.++.+.+|
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 73 ASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp HHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 22223455666766664 577766554444
No 115
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.29 E-value=0.017 Score=52.41 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=65.2
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCCh
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~~ 171 (444)
++|+|.|+ |++|+.+++.|+..| -++.+++.+.-.... +.+ .++.+...+.. +...+.++++|+||.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~---~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKI---ENE--HLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCC---CCT--TEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchh---ccC--ceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 58999995 779999999999999 478888775433222 222 34555555553 44567788999999886532
Q ss_pred -----------HhHHHHHHHHHHcCC-cEEEEcccCC
Q 013384 172 -----------PSRYMISDCCVVLGK-PLVSGAALGL 196 (444)
Q Consensus 172 -----------~~r~~i~~~~~~~~~-p~i~~~~~g~ 196 (444)
..-..+.++|.+.++ .+|..+..+.
T Consensus 79 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 79 WNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115 (227)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhh
Confidence 223355667777775 5777765543
No 116
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.29 E-value=0.00082 Score=57.34 Aligned_cols=71 Identities=13% Similarity=0.250 Sum_probs=50.3
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
.+++|+|+|+|++|..+++.|...|+. ++++|.+.-....+.+ +. ..+. ..++..+.+.++|+||.|+..
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~--~~~~------~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYE--YEYV------LINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHT--CEEE------ECSCHHHHHHTCSEEEECSCC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhC--CceE------eecCHHHHhcCCCEEEEeCCC
Confidence 388999999999999999999999987 9999875432222222 21 1111 123445667889999999976
Q ss_pred h
Q 013384 171 A 171 (444)
Q Consensus 171 ~ 171 (444)
.
T Consensus 91 ~ 91 (144)
T 3oj0_A 91 K 91 (144)
T ss_dssp S
T ss_pred C
Confidence 5
No 117
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.24 E-value=0.0097 Score=58.50 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=67.9
Q ss_pred HHHhhhcCcEEEEC-CCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCC-c-ccHHhhcCCCc
Q 013384 87 GQSNLLKSSILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALR-T-SNALEILSQYE 162 (444)
Q Consensus 87 ~q~~L~~~~VlIvG-~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~-~-~~~~~~~~~~D 162 (444)
+...++.++|+|.| .|.+|+.+++.|... |. ++.++|... +++..+...-.++.+...+. . +...+.++++|
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~---~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d 93 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQT---DRLGDLVKHERMHFFEGDITINKEWVEYHVKKCD 93 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCC---TTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCCh---hhhhhhccCCCeEEEeCccCCCHHHHHHHhccCC
Confidence 44567788999999 577999999999998 64 777777643 22222222234556666665 3 34456678999
Q ss_pred EEEEccCChHh-----------------HHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 163 IVVDATDNAPS-----------------RYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 163 vVi~~~D~~~~-----------------r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+||.+...... -..+-++|.+.++.+|+.+..+.+|
T Consensus 94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg 146 (372)
T 3slg_A 94 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYG 146 (372)
T ss_dssp EEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGB
T ss_pred EEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhC
Confidence 99986542110 1245667777777888887665554
No 118
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.23 E-value=0.0051 Score=58.90 Aligned_cols=68 Identities=16% Similarity=0.308 Sum_probs=47.0
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+++++|+|+|+||.|..++..|+..|+++|+|++.+.-....|. .......+ ++..+ + ++|+||+||.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La---~~~~~~~~------~~l~~-l-~~DivInaTp 187 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY---GEFKVISY------DELSN-L-KGDVIINCTP 187 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC---TTSEEEEH------HHHTT-C-CCSEEEECSS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---HhcCcccH------HHHHh-c-cCCEEEECCc
Confidence 57889999999999999999999999999999876542222221 12211111 12223 4 7999999884
No 119
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.20 E-value=0.012 Score=57.78 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=56.0
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEc
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDA 167 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~ 167 (444)
+++++|+|.| .|++|+++++.|+.. |..++.++|.+.-....+....+...+..+...+.+ +...+.++++|+||.+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 5678999999 578999999999999 988999998765433222221112345566666654 3456678899999988
Q ss_pred cC
Q 013384 168 TD 169 (444)
Q Consensus 168 ~D 169 (444)
..
T Consensus 99 Aa 100 (344)
T 2gn4_A 99 AA 100 (344)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 120
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.20 E-value=0.027 Score=50.96 Aligned_cols=93 Identities=9% Similarity=0.138 Sum_probs=63.2
Q ss_pred cEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc--ccHHhhcCCCcEEEEccCCh
Q 013384 95 SILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT--SNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 95 ~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~--~~~~~~~~~~DvVi~~~D~~ 171 (444)
+|+|.| .|++|..+++.|+..|. ++.+++.+.-....+ ..++.+...++. +...+.++++|+||.+....
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc------CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 699999 67799999999999994 778877654322221 245556556654 35567788999999887532
Q ss_pred ---------HhHHHHHHHHHHcCC-cEEEEccc
Q 013384 172 ---------PSRYMISDCCVVLGK-PLVSGAAL 194 (444)
Q Consensus 172 ---------~~r~~i~~~~~~~~~-p~i~~~~~ 194 (444)
..-..+-++|.+.+. .+|+.+..
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 223456667777765 46666543
No 121
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.20 E-value=0.0022 Score=65.13 Aligned_cols=79 Identities=15% Similarity=0.247 Sum_probs=52.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCC--CcEEEee----CCc-ccc-cc---ccccc-CcceEEEEeecCCcccHHhh
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGV--GRLGIVD----HDV-VEL-NN---MHRIN-STVHIIEHREALRTSNALEI 157 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gv--g~i~lvD----~D~-V~~-sN---l~Rln-p~~~v~~~~~~~~~~~~~~~ 157 (444)
.|++++|+|+|+||.|..++..|...|+ ++|+++| .+- ++. .+ +..+. .... ............+.
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~--~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLK--KTNGENIEGGPQEA 260 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHT--TSCTTCCCSSHHHH
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhh--ccccccccccHHHH
Confidence 5778999999999999999999999999 8999999 541 222 23 22200 0000 00000012344566
Q ss_pred cCCCcEEEEccCC
Q 013384 158 LSQYEIVVDATDN 170 (444)
Q Consensus 158 ~~~~DvVi~~~D~ 170 (444)
+.++|+||++|--
T Consensus 261 l~~aDVlInaT~~ 273 (439)
T 2dvm_A 261 LKDADVLISFTRP 273 (439)
T ss_dssp HTTCSEEEECSCC
T ss_pred hccCCEEEEcCCC
Confidence 7889999999875
No 122
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.18 E-value=0.01 Score=55.61 Aligned_cols=73 Identities=21% Similarity=0.202 Sum_probs=52.4
Q ss_pred cEEEECC-CccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc-CCCcEEEEccCCh
Q 013384 95 SILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL-SQYEIVVDATDNA 171 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~-~~~DvVi~~~D~~ 171 (444)
||+|+|+ |.+|..+++.+... |..-+.++|.+ ++..+++ .++|+|||++. +
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-------------------------~dl~~~~~~~~DvvIDfT~-p 55 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-------------------------DPLSLLTDGNTEVVIDFTH-P 55 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-------------------------CCTHHHHHTTCCEEEECSC-T
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-------------------------CCHHHHhccCCcEEEEccC-h
Confidence 6999997 99999999998765 65444455532 1222333 37999999994 4
Q ss_pred HhHHHHHHHHHHcCCcEEEEcc
Q 013384 172 PSRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~p~i~~~~ 193 (444)
..-...-..|.++++|+|.+.+
T Consensus 56 ~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 56 DVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp TTHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEcCC
Confidence 5556667789999999987643
No 123
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.17 E-value=0.0099 Score=54.07 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=48.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.+...+|.|||+|.+|+.++..|+..|. ++.++|.+. . .++++|+||.|+-
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~~-----------~-----------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSKD-----------Q-----------------ATTLGEIVIMAVP 66 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTC-----------C-----------------CSSCCSEEEECSC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH-----------H-----------------HhccCCEEEEcCC
Confidence 5667789999999999999999999996 677766421 0 3468999999998
Q ss_pred ChHhHHHHHHHHHH-cCCcEEEE
Q 013384 170 NAPSRYMISDCCVV-LGKPLVSG 191 (444)
Q Consensus 170 ~~~~r~~i~~~~~~-~~~p~i~~ 191 (444)
....+..+.+.... .+..+|+.
T Consensus 67 ~~~~~~v~~~l~~~~~~~~vi~~ 89 (209)
T 2raf_A 67 YPALAALAKQYATQLKGKIVVDI 89 (209)
T ss_dssp HHHHHHHHHHTHHHHTTSEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEEE
Confidence 55555555543211 14555554
No 124
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.16 E-value=0.016 Score=55.53 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=63.7
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~ 171 (444)
.++|+|.| .|.+|+.+++.|...|. ++..++.+. . ... + + .++.+...+..+...++++++|+||.+....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~--~~~-~-~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~ 73 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSI-G--NKA-I-N--DYEYRVSDYTLEDLINQLNDVDAVVHLAATR 73 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC-C-----------CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCC-C--ccc-C-C--ceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence 36899999 57799999999999996 677777651 1 111 1 1 3344444454445667788999999886432
Q ss_pred -------------HhHHHHHHHHHHcCCc-EEEEcccCCcc
Q 013384 172 -------------PSRYMISDCCVVLGKP-LVSGAALGLEG 198 (444)
Q Consensus 172 -------------~~r~~i~~~~~~~~~p-~i~~~~~g~~G 198 (444)
..-..+-++|.+.+++ +|+.+..+..|
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 1123566677777776 77776544443
No 125
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.15 E-value=0.0093 Score=59.32 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=63.5
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC--cccc-cc--ccc----ccCcceEEEEeecCCcccHHhhcCC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD--VVEL-NN--MHR----INSTVHIIEHREALRTSNALEILSQ 160 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D--~V~~-sN--l~R----lnp~~~v~~~~~~~~~~~~~~~~~~ 160 (444)
+|++.+|+|+|+|..|..+++.|..+|+++|+++|.+ .... .+ |+. +..... ......+..+.++.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-----~~~~~~~L~eav~~ 263 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-----PERLSGDLETALEG 263 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-----TTCCCSCHHHHHTT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-----ccCchhhHHHHHcc
Confidence 6889999999999999999999999999999999997 2221 12 443 111110 01123567888899
Q ss_pred CcEEEEccCCh-HhHHHHHHHHHHcCCcEEEE
Q 013384 161 YEIVVDATDNA-PSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 161 ~DvVi~~~D~~-~~r~~i~~~~~~~~~p~i~~ 191 (444)
+|++|.++-.. =++..+..++ ..|+|..
T Consensus 264 ADVlIG~Sap~l~t~emVk~Ma---~~pIIfa 292 (388)
T 1vl6_A 264 ADFFIGVSRGNILKPEWIKKMS---RKPVIFA 292 (388)
T ss_dssp CSEEEECSCSSCSCHHHHTTSC---SSCEEEE
T ss_pred CCEEEEeCCCCccCHHHHHhcC---CCCEEEE
Confidence 99999998721 1344444432 3577754
No 126
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.12 E-value=0.01 Score=55.33 Aligned_cols=97 Identities=23% Similarity=0.217 Sum_probs=59.0
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccc--cc-------c--cccccCcceEEEEeecCCcccHHhh
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVE--LN-------N--MHRINSTVHIIEHREALRTSNALEI 157 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~--~s-------N--l~Rlnp~~~v~~~~~~~~~~~~~~~ 157 (444)
..+...+|.|||+|.+|+.++..|+..|. +++++|.+.-. .. | +.++..... .....+..+.
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~e~ 87 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP------HVHLAAFADV 87 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHTCC-------CCHHHHGGGST------TCEEEEHHHH
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC------ceeccCHHHH
Confidence 47888999999999999999999999996 78888876432 00 0 111110000 0111344566
Q ss_pred cCCCcEEEEccCChHhHHHHHHH-H-HHcCCcEEEEc
Q 013384 158 LSQYEIVVDATDNAPSRYMISDC-C-VVLGKPLVSGA 192 (444)
Q Consensus 158 ~~~~DvVi~~~D~~~~r~~i~~~-~-~~~~~p~i~~~ 192 (444)
++++|+||.|+-.......+.+. . ...+..+|+.+
T Consensus 88 ~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 88 AAGAELVVNATEGASSIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp HHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred HhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence 77899999999877666555443 1 12455566554
No 127
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.11 E-value=0.015 Score=59.52 Aligned_cols=76 Identities=13% Similarity=0.208 Sum_probs=50.7
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDN 170 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~ 170 (444)
+.++|+|+|+|++|..++..|+..|. +++++|.+.-....+....+ .+......+.. +...++++++|+||.|+..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~--~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVAKHDLVISLIPY 78 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCT--TEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence 45789999999999999999999995 59998876422222221111 13333334442 3445667899999999864
No 128
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.01 E-value=0.0042 Score=62.64 Aligned_cols=73 Identities=23% Similarity=0.360 Sum_probs=52.2
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+.+++|+|+|+|++|..+++.|...|+.+++++|.+.-....+.+ +. . .. +..++..+.+.++|+||+|+.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~--~~----~~~~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--G--EA----VRFDELVDHLARSDVVVSATA 236 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--C--EE----CCGGGHHHHHHTCSEEEECCS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--C--ce----ecHHhHHHHhcCCCEEEEccC
Confidence 688999999999999999999999999999999865322112221 11 1 11 112345566789999999987
Q ss_pred Ch
Q 013384 170 NA 171 (444)
Q Consensus 170 ~~ 171 (444)
..
T Consensus 237 ~~ 238 (404)
T 1gpj_A 237 AP 238 (404)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 129
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.00 E-value=0.021 Score=55.45 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=68.5
Q ss_pred HhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc-ccccccccCc------ceEEEEeecCCc-ccHHhhcC
Q 013384 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE-LNNMHRINST------VHIIEHREALRT-SNALEILS 159 (444)
Q Consensus 89 ~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~-~sNl~Rlnp~------~~v~~~~~~~~~-~~~~~~~~ 159 (444)
..++.++|+|.|+ |.+|+.+++.|...|. ++..+|...-. ..++..+... -.++.+...+.. +....+++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 99 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK 99 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence 4567889999995 7799999999999995 67777654321 1122111100 245555556654 44567788
Q ss_pred CCcEEEEccCChH-----------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 160 QYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 160 ~~DvVi~~~D~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
++|+||.+..... .-..+-++|.+.++ .+|+.+..+..|
T Consensus 100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 9999998875310 11235667777775 577776555444
No 130
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.00 E-value=0.019 Score=55.67 Aligned_cols=102 Identities=16% Similarity=0.078 Sum_probs=59.9
Q ss_pred HHHHhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcE
Q 013384 86 EGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEI 163 (444)
Q Consensus 86 ~~q~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~Dv 163 (444)
..+..++.++|+|.|+ |.+|+.+++.|+..|. ++.++|...-. + .++.+...+.. +...+++.++|+
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~--------~--~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG--------T--GGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS--------S--CCSEEESCTTCHHHHHHHHTTCSE
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC--------C--CccEEecCcCCHHHHHHHHhCCCE
Confidence 3456788899999997 7799999999999995 67776654321 1 22334444443 345667789999
Q ss_pred EEEccCCh---------------HhHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 164 VVDATDNA---------------PSRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 164 Vi~~~D~~---------------~~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
||.+.... ..-..+-++|.+.++ .+|+.+..+.+|
T Consensus 81 vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg 131 (347)
T 4id9_A 81 VLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYP 131 (347)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTT
T ss_pred EEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhC
Confidence 99875321 011245566777665 577766544443
No 131
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.99 E-value=0.049 Score=49.81 Aligned_cols=76 Identities=8% Similarity=0.186 Sum_probs=52.1
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCC-cEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEc
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDA 167 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg-~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~ 167 (444)
+++++|+|.| .|++|..+++.|+..|.. ++.++|.+.-....+ ..+ .+..+...++. +...+.+++.|+||.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~--~~~--~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 91 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE--AYK--NVNQEVVDFEKLDDYASAFQGHDVGFCC 91 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG--GGG--GCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc--ccC--CceEEecCcCCHHHHHHHhcCCCEEEEC
Confidence 5678899999 588999999999999963 788887653222111 111 23444445543 4456677899999998
Q ss_pred cCC
Q 013384 168 TDN 170 (444)
Q Consensus 168 ~D~ 170 (444)
...
T Consensus 92 ag~ 94 (242)
T 2bka_A 92 LGT 94 (242)
T ss_dssp CCC
T ss_pred CCc
Confidence 754
No 132
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.96 E-value=0.01 Score=57.54 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=50.0
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc-ccccccccc-cCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV-VELNNMHRI-NSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~-V~~sNl~Rl-np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
...+|.|||+|.+|+.++..|+..|...++++|.+. -+. ..++ ...+. . ..+..+.++++|+||.|+-
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~--~~~~~~~g~~--~------~~~~~e~~~~aDvVi~~vp 92 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESW--RPRAEELGVS--C------KASVAEVAGECDVIFSLVT 92 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHH--HHHHHHTTCE--E------CSCHHHHHHHCSEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHH--HHHHHHCCCE--E------eCCHHHHHhcCCEEEEecC
Confidence 346899999999999999999999987899998752 110 1110 00111 0 1233455667888888876
Q ss_pred ChHhHHHHHHH
Q 013384 170 NAPSRYMISDC 180 (444)
Q Consensus 170 ~~~~r~~i~~~ 180 (444)
.......+...
T Consensus 93 ~~~~~~~~~~l 103 (312)
T 3qsg_A 93 AQAALEVAQQA 103 (312)
T ss_dssp TTTHHHHHHHH
T ss_pred chhHHHHHHhh
Confidence 66554444444
No 133
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.96 E-value=0.0057 Score=59.78 Aligned_cols=106 Identities=13% Similarity=0.169 Sum_probs=67.7
Q ss_pred hhccccCCCCCHHHHHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCccc
Q 013384 74 YSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSN 153 (444)
Q Consensus 74 y~Rq~~l~~~g~~~q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~ 153 (444)
|+++++--.|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.... .. . .....+
T Consensus 121 ~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-------~~--~---~~~~~~ 187 (324)
T 3hg7_A 121 YREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSGRERAG-------FD--Q---VYQLPA 187 (324)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCTT-------CS--E---EECGGG
T ss_pred HHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCChHHhhh-------hh--c---ccccCC
Confidence 44443333354333357999999999999999999999999997 67777754321111 00 0 012345
Q ss_pred HHhhcCCCcEEEEccC-ChHhHHHHHHHHH---HcCCcEEEEc
Q 013384 154 ALEILSQYEIVVDATD-NAPSRYMISDCCV---VLGKPLVSGA 192 (444)
Q Consensus 154 ~~~~~~~~DvVi~~~D-~~~~r~~i~~~~~---~~~~p~i~~~ 192 (444)
..++++.+|+|+.++- ++.++..++.... +.+.-+|+.+
T Consensus 188 l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~a 230 (324)
T 3hg7_A 188 LNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG 230 (324)
T ss_dssp HHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECS
T ss_pred HHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 6778899999998875 5566766654332 2344577765
No 134
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.95 E-value=0.0029 Score=63.02 Aligned_cols=118 Identities=18% Similarity=0.235 Sum_probs=74.6
Q ss_pred HhhhhccccCCCCCHHHH------------------HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccc--
Q 013384 71 IYRYSRHLLLPSFGVEGQ------------------SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVEL-- 130 (444)
Q Consensus 71 ~~ry~Rq~~l~~~g~~~q------------------~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~-- 130 (444)
++||...+.+|-|-.+-| .+|++.||+|+|+|..|..+++.|..+|+++|+++|.+-+=.
T Consensus 148 l~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~ 227 (398)
T 2a9f_A 148 EQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQ 227 (398)
T ss_dssp HHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTT
T ss_pred HHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCC
Confidence 467766555555653322 378899999999999999999999999999999999986321
Q ss_pred --cccccc-cCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-HhHHHHHHHHHHcCCcEEEEcc
Q 013384 131 --NNMHRI-NSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-PSRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 131 --sNl~Rl-np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~~r~~i~~~~~~~~~p~i~~~~ 193 (444)
.+|+.. .+...- .+..-...+..+.++..|++|.++..- =++..+..++ ..|+|..-+
T Consensus 228 R~~~L~~~k~~fa~~--~~~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma---~~pIIfals 289 (398)
T 2a9f_A 228 EAAQLAPHHLDIAKV--TNREFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMA---ARPVIFAMA 289 (398)
T ss_dssp CCCSCCC---CHHHH--HSCTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSC---SSCEEEECC
T ss_pred ccccchHHHHHHhhc--cCcccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhC---CCCEEEECC
Confidence 234330 000000 000001234567778899999887511 2355555544 567877643
No 135
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.85 E-value=0.012 Score=54.14 Aligned_cols=88 Identities=8% Similarity=-0.011 Sum_probs=61.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccH-Hhh-cCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA-LEI-LSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~-~~~-~~~~DvVi~~~D~ 170 (444)
..+|+|+|+|.+|..+++.|...|. ++++|.|.-.. ..+.+. +..+....+.... ... +.++|+||.++++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~---~~~~~~--~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRK---KVLRSG--ANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHH---HHHHTT--CEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHH---HHHhcC--CeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 4579999999999999999999987 89998764322 111123 3344444443332 222 6899999999998
Q ss_pred hHhHHHHHHHHHHcCCc
Q 013384 171 APSRYMISDCCVVLGKP 187 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p 187 (444)
...-..+...+++.+..
T Consensus 82 d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 82 DSETIHCILGIRKIDES 98 (234)
T ss_dssp HHHHHHHHHHHHHHCSS
T ss_pred cHHHHHHHHHHHHHCCC
Confidence 87777777778777653
No 136
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.84 E-value=0.013 Score=55.03 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=59.5
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
+...+|.|||+|.+|+.++..|+..|...+.++|.+.-....+.. ...+... .+..+.++++|+||.|+-.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~---~~g~~~~------~~~~~~~~~~Dvvi~av~~ 78 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQ---KVEAEYT------TDLAEVNPYAKLYIVSLKD 78 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH---HTTCEEE------SCGGGSCSCCSEEEECCCH
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH---HcCCcee------CCHHHHhcCCCEEEEecCH
Confidence 445689999999999999999999997658888865322211111 1111111 2234556789999999987
Q ss_pred hHhHHHHHHHHHH--cCCcEEEEc
Q 013384 171 APSRYMISDCCVV--LGKPLVSGA 192 (444)
Q Consensus 171 ~~~r~~i~~~~~~--~~~p~i~~~ 192 (444)
...+..+.+.... .+..+++.+
T Consensus 79 ~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 79 SAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHHHHHHhhcCCCcEEEECC
Confidence 7665555544321 345566654
No 137
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.82 E-value=0.016 Score=57.02 Aligned_cols=91 Identities=11% Similarity=0.118 Sum_probs=61.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|....... ... .+ .. .++..++++.+|+|+.++
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~---~~~-g~--~~------~~~l~ell~~sDvV~l~~ 235 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHA---LEE-GA--IY------HDTLDSLLGASDIFLIAA 235 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHH---HHT-TC--EE------CSSHHHHHHTCSEEEECS
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchh---hhc-CC--eE------eCCHHHHHhhCCEEEEec
Confidence 46889999999999999999999998887 6777775432110 000 11 00 135677889999999887
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
. +++++..++..... .+.-+|+.+
T Consensus 236 Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 236 PGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp CCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred CCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 6 56777766554332 234477765
No 138
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.82 E-value=0.008 Score=58.42 Aligned_cols=95 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc--cccccccc---ccCcceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV--VELNNMHR---INSTVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~--V~~sNl~R---lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
...+|+|||+|.+|+.++..|+++|. .++++ .+. ++.-+-.. ..+..... .....+ .+. +.+.++|+||.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~-~~~~~~-~~~-~~~~~~D~vil 92 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQ-VKVSAS-SDP-SAVQGADLVLF 92 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEE-ECCEEE-SCG-GGGTTCSEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEE-Eeeeee-CCH-HHcCCCCEEEE
Confidence 45679999999999999999999996 67776 432 22111011 11222211 111111 122 23478999999
Q ss_pred ccCChHhHHHHHHHHHH--cCCcEEEE
Q 013384 167 ATDNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
|+-....+..+.+..-. .+.++|+.
T Consensus 93 avk~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 93 CVKSTDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp CCCGGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred EcccccHHHHHHHHHHhcCCCCEEEEe
Confidence 99888777666665422 24455554
No 139
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.81 E-value=0.027 Score=54.40 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=64.0
Q ss_pred HhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccc-ccccCcceEEEEeecCCc-ccHHhhcC--CCcE
Q 013384 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNM-HRINSTVHIIEHREALRT-SNALEILS--QYEI 163 (444)
Q Consensus 89 ~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl-~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~Dv 163 (444)
..+++.+|+|.|+ |++|+.+++.|+..|. ++.++|.+.-....+ ..+ + .++.+...++. +...++++ ++|+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l-~--~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPV-A--GLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSC-T--TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhcc-C--CceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 3566778999996 7899999999999994 777877643221110 011 2 34555555654 33456667 8999
Q ss_pred EEEccCCh--------------HhHHHHHHHHHHcCC-cEEEEcccC
Q 013384 164 VVDATDNA--------------PSRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 164 Vi~~~D~~--------------~~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
||.+.... ..-..+.++|.+.+. .+|+.+...
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~ 138 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTAL 138 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGG
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHH
Confidence 99886421 112345556666664 567665443
No 140
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.75 E-value=0.023 Score=51.11 Aligned_cols=92 Identities=18% Similarity=0.111 Sum_probs=58.6
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh--
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-- 171 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-- 171 (444)
+|+|.|+ |++|+.+++.|+..|. ++.+++.+.-. +..+.+.+ +.+...++.... +.+.++|+||.+....
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~~~~--~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~ 74 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGK---ITQTHKDI--NILQKDIFDLTL-SDLSDQNVVVDAYGISPD 74 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHH---HHHHCSSS--EEEECCGGGCCH-HHHTTCSEEEECCCSSTT
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchh---hhhccCCC--eEEeccccChhh-hhhcCCCEEEECCcCCcc
Confidence 6999995 7899999999999994 77777765322 11122333 344445554444 6778999999887542
Q ss_pred ------HhHHHHHHHHHHcC-CcEEEEcc
Q 013384 172 ------PSRYMISDCCVVLG-KPLVSGAA 193 (444)
Q Consensus 172 ------~~r~~i~~~~~~~~-~p~i~~~~ 193 (444)
..-..+-++|.+.+ ..+|..+.
T Consensus 75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 75 EAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp TTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred ccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 12234555666653 45666553
No 141
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.71 E-value=0.0076 Score=57.22 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=49.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++++|+|+|+||+|..++..|+..| .+++++|.+.-....+.. +.....+...+ + +...+ ..+|+||+|+
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~--~~~~~--~~~DivVn~t 188 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTGSIQALS--M--DELEG--HEFDLIINAT 188 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHTGGGSSEEECC--S--GGGTT--CCCSEEEECC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHhhccCCeeEec--H--HHhcc--CCCCEEEECC
Confidence 357889999999999999999999999 799999876432223322 21111122211 1 11111 5899999999
Q ss_pred CChH
Q 013384 169 DNAP 172 (444)
Q Consensus 169 D~~~ 172 (444)
....
T Consensus 189 ~~~~ 192 (271)
T 1nyt_A 189 SSGI 192 (271)
T ss_dssp SCGG
T ss_pred CCCC
Confidence 7643
No 142
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.64 E-value=0.048 Score=53.29 Aligned_cols=108 Identities=10% Similarity=0.111 Sum_probs=66.7
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHH--cCCCcEEEeeCCccc-------cccccc--ccCcceEEEEeecCCcc-cHHh
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAA--CGVGRLGIVDHDVVE-------LNNMHR--INSTVHIIEHREALRTS-NALE 156 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~--~Gvg~i~lvD~D~V~-------~sNl~R--lnp~~~v~~~~~~~~~~-~~~~ 156 (444)
.+++++|+|.| .|++|+.+++.|+. .|. ++.++|...-. ...+.+ ..+...+..+...+... ....
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 45678999997 57799999999999 675 67777653320 111111 11122345555566543 3444
Q ss_pred h-cCCCcEEEEccCCh-------H--------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 157 I-LSQYEIVVDATDNA-------P--------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 157 ~-~~~~DvVi~~~D~~-------~--------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+ ..++|+||.+.... . .-..+.++|.+.+.++|+.+..+..|
T Consensus 86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg 143 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYG 143 (362)
T ss_dssp HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGC
T ss_pred hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhC
Confidence 4 67899999876421 1 11345667777777788877655444
No 143
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.64 E-value=0.0083 Score=57.59 Aligned_cols=72 Identities=15% Similarity=0.283 Sum_probs=50.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|||+|.+|..+++.|...|. ++.++|...-....+..+ .+. .. ..+...++++.+|+|+.++.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~~--~~----~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEM--GME--PF----HISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT--TSE--EE----EGGGHHHHTTTCSEEEECCS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC--CCe--ec----ChhhHHHHhcCCCEEEECCC
Confidence 4788999999999999999999999998 899998754221111111 111 11 11345667889999999985
Q ss_pred C
Q 013384 170 N 170 (444)
Q Consensus 170 ~ 170 (444)
.
T Consensus 223 ~ 223 (293)
T 3d4o_A 223 A 223 (293)
T ss_dssp S
T ss_pred h
Confidence 4
No 144
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.62 E-value=0.022 Score=51.50 Aligned_cols=93 Identities=19% Similarity=0.073 Sum_probs=58.9
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh--
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-- 171 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-- 171 (444)
+|+|.|+ |++|+.+++.|+..|. ++.+++.+.-....+ ..+.+ +.+...++.... +.+.++|+||.+....
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~~--~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADR--LGATV--ATLVKEPLVLTE-ADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH--TCTTS--EEEECCGGGCCH-HHHTTCSEEEECCCCCTT
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccc--cCCCc--eEEecccccccH-hhcccCCEEEECCccCCC
Confidence 5999997 8899999999999995 777776543221111 12333 444455554444 6778999999887441
Q ss_pred --------HhHHHHHHHHHHcCCcEEEEcc
Q 013384 172 --------PSRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 172 --------~~r~~i~~~~~~~~~p~i~~~~ 193 (444)
..-..+-++|.+.+..+|..+.
T Consensus 76 ~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 76 SGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp SSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred cchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 1223444556666666666553
No 145
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.62 E-value=0.014 Score=55.39 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=31.6
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
+++|+|+|+||.|..++..|+..| .+|+|++.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 789999999999999999999999 9999987654
No 146
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.61 E-value=0.035 Score=53.00 Aligned_cols=99 Identities=20% Similarity=0.212 Sum_probs=60.2
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC--
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN-- 170 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~-- 170 (444)
++|+|.|+ |++|+.+++.|+..| ++.+++...- .....+.+ .++.+...+..+...+++.++|+||.+...
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~~~--~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~ 75 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNLSS--GNEEFVNE--AARLVKADLAADDIKDYLKGAEEVWHIAANPD 75 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCCSS--CCGGGSCT--TEEEECCCTTTSCCHHHHTTCSEEEECCCCCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcCCC--CChhhcCC--CcEEEECcCChHHHHHHhcCCCEEEECCCCCC
Confidence 47999995 779999999999998 5555543211 11111222 244555556555667778899999987542
Q ss_pred -------hH--------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 171 -------AP--------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 171 -------~~--------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
+. .-..+-++|.+.+. .+|+.+.....|
T Consensus 76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 76 VRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG 119 (313)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence 11 11234456666665 577776654444
No 147
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.61 E-value=0.035 Score=52.40 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=57.2
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccc--cCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRI--NSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rl--np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
+|+|||+|.+|+.++..|++.|. +++++|.+.-....+... +.. .+. ..+...+ .+.+.++|+||.|+-...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~~~~~-~~~---~~~~~~~-~~~~~~~d~vi~~v~~~~ 75 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGS-IFN---ESLTAND-PDFLATSDLLLVTLKAWQ 75 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSC-EEE---EEEEESC-HHHHHTCSEEEECSCGGG
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEcCCCc-eee---eeeeecC-ccccCCCCEEEEEecHHh
Confidence 69999999999999999999996 789988764222222211 111 110 1111112 244578999999998877
Q ss_pred hHHHHHHHHHH--cCCcEEEE
Q 013384 173 SRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 173 ~r~~i~~~~~~--~~~p~i~~ 191 (444)
.+..+...... .+..+|+.
T Consensus 76 ~~~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 76 VSDAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp HHHHHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEe
Confidence 76666555422 24556665
No 148
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.60 E-value=0.036 Score=50.09 Aligned_cols=98 Identities=9% Similarity=0.110 Sum_probs=62.5
Q ss_pred CcEEEEC-CCccHHHHHHHHH-HcCCCcEEEeeCCcc-cccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 94 SSILVIG-AGGLGSPALLYLA-ACGVGRLGIVDHDVV-ELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 94 ~~VlIvG-~GglGs~ia~~La-~~Gvg~i~lvD~D~V-~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
++|+|.| .|++|..+++.|+ ..|. ++.+++.+.- ....+.. ....++.+...+++ +...+.++++|+||.+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 4599999 5889999999999 8887 7888877643 2222110 12345555556654 445667889999998876
Q ss_pred C--hHhHHHHHHHHHHcCC-cEEEEcccC
Q 013384 170 N--APSRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 170 ~--~~~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
. +.++ .+-+.+.+.+. .+|+.+..+
T Consensus 83 ~~n~~~~-~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 83 ESGSDMA-SIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp CCHHHHH-HHHHHHHHTTCCEEEEEEETT
T ss_pred CCChhHH-HHHHHHHhcCCCeEEEEeece
Confidence 4 2333 34445556554 466655443
No 149
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.57 E-value=0.0055 Score=60.00 Aligned_cols=82 Identities=17% Similarity=0.285 Sum_probs=51.4
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--cc---CcceEEEEeecCCc-ccHHhhcCCCcEEEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--IN---STVHIIEHREALRT-SNALEILSQYEIVVD 166 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--ln---p~~~v~~~~~~~~~-~~~~~~~~~~DvVi~ 166 (444)
..+|+|||+|.+|+.++..|+++|. .++++|.+. ....+.+ ++ +.... ...+.. .+..+ +.++|+||.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r~~-~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~-~~~~D~Vil 76 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLARGA-TLQALQTAGLRLTEDGATH---TLPVRATHDAAA-LGEQDVVIV 76 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECCHH-HHHHHHHTCEEEEETTEEE---EECCEEESCHHH-HCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEChH-HHHHHHHCCCEEecCCCeE---EEeeeEECCHHH-cCCCCEEEE
Confidence 4689999999999999999999996 799998742 1111111 11 21111 111211 22333 488999999
Q ss_pred ccCChHhHHHHHHH
Q 013384 167 ATDNAPSRYMISDC 180 (444)
Q Consensus 167 ~~D~~~~r~~i~~~ 180 (444)
|+-....+..+.+.
T Consensus 77 avk~~~~~~~~~~l 90 (335)
T 3ghy_A 77 AVKAPALESVAAGI 90 (335)
T ss_dssp CCCHHHHHHHHGGG
T ss_pred eCCchhHHHHHHHH
Confidence 99776655544433
No 150
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.56 E-value=0.027 Score=54.11 Aligned_cols=64 Identities=25% Similarity=0.319 Sum_probs=49.1
Q ss_pred CcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 94 SSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 94 ~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
.+|.||| +|.+|+.++..|+..|. ++.++|.+.- .+..+.+.++|+||.|+-...
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~~-----------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDW-----------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCG-----------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCcc-----------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 5899999 99999999999999997 7888775321 123456678999999987766
Q ss_pred hHHHHHHHH
Q 013384 173 SRYMISDCC 181 (444)
Q Consensus 173 ~r~~i~~~~ 181 (444)
.+..+.+..
T Consensus 78 ~~~vl~~l~ 86 (298)
T 2pv7_A 78 TLETIERLK 86 (298)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 666666654
No 151
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.55 E-value=0.042 Score=51.65 Aligned_cols=97 Identities=13% Similarity=0.009 Sum_probs=60.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA- 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~- 171 (444)
..+|+|.|+|.+|+.+++.|...|. +++.++.+.-....+ ..+ .++.+...+.. .+ +.++|+||.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~--~~~~~~~D~~d---~~-~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAI--RAS--GAEPLLWPGEE---PS-LDGVTHLLISTAPDS 75 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHH--HHT--TEEEEESSSSC---CC-CTTCCEEEECCCCBT
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhH--hhC--CCeEEEecccc---cc-cCCCCEEEECCCccc
Confidence 3689999999999999999999986 677766543221111 112 24444444443 12 68899999887432
Q ss_pred ---HhHHHHHHHHHH--cC-CcEEEEcccCCcc
Q 013384 172 ---PSRYMISDCCVV--LG-KPLVSGAALGLEG 198 (444)
Q Consensus 172 ---~~r~~i~~~~~~--~~-~p~i~~~~~g~~G 198 (444)
.....+-++|.. .+ ..+|+.+..+..|
T Consensus 76 ~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 76 GGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp TBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 222345556665 34 4577776655444
No 152
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.53 E-value=0.066 Score=52.71 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=65.4
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDA 167 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~ 167 (444)
.++.++|+|.|+ |.+|+.+++.|+..|.-++.++|...-.. ..++.....++.+...+.. +...++++++|+||.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~ 106 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE--KINVPDHPAVRFSETSITDDALLASLQDEYDYVFHL 106 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC--GGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc--hhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence 467789999995 77999999999999955788877543221 1111112235555555554 3455677899999988
Q ss_pred cCChH-----------------hHHHHHHHHHHc-CC-cEEEEcccCCcc
Q 013384 168 TDNAP-----------------SRYMISDCCVVL-GK-PLVSGAALGLEG 198 (444)
Q Consensus 168 ~D~~~-----------------~r~~i~~~~~~~-~~-p~i~~~~~g~~G 198 (444)
..... .-..+.++|.+. ++ .+|+.+.....|
T Consensus 107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIA 156 (377)
T ss_dssp CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcC
Confidence 65321 112345666666 54 677776554444
No 153
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.53 E-value=0.033 Score=51.48 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=56.1
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc-CCCcEEEEccCChHh
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL-SQYEIVVDATDNAPS 173 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~-~~~DvVi~~~D~~~~ 173 (444)
||.|||+|.+|..+++.|...|+.-..++|.+. . ..+ ...+..+++ .+.|+|+.|+-+...
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~---~~~--------------~~~~~~~l~~~~~DvVv~~~~~~~~ 63 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-E---HEK--------------MVRGIDEFLQREMDVAVEAASQQAV 63 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-C---CTT--------------EESSHHHHTTSCCSEEEECSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-c---hhh--------------hcCCHHHHhcCCCCEEEECCCHHHH
Confidence 699999999999999999988875447888663 1 111 112345566 689999999977544
Q ss_pred HHHHHHHHHHcCCcEEEEcc
Q 013384 174 RYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 174 r~~i~~~~~~~~~p~i~~~~ 193 (444)
.. +-..+.+.|+++|....
T Consensus 64 ~~-~~~~~l~~G~~vv~~~~ 82 (236)
T 2dc1_A 64 KD-YAEKILKAGIDLIVLST 82 (236)
T ss_dssp HH-HHHHHHHTTCEEEESCG
T ss_pred HH-HHHHHHHCCCcEEEECc
Confidence 33 33466778888887654
No 154
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.52 E-value=0.023 Score=55.28 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=62.3
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcc-ccccccc----ccCcceEEEEeecCCc-ccHHhhcC--CC
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVV-ELNNMHR----INSTVHIIEHREALRT-SNALEILS--QY 161 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V-~~sNl~R----lnp~~~v~~~~~~~~~-~~~~~~~~--~~ 161 (444)
+..++|+|.|+ |.+|+.+++.|...| -++.+++.+.- ....+.+ ..+. ++.+...+++ +.....++ ++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKG--AIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCC--cEEEEeecCCHHHHHHHHhhCCC
Confidence 44578999998 779999999999999 57777776541 1111111 1223 3444555553 44566778 99
Q ss_pred cEEEEccCC--hHhHHHHHHHHHHcC-CcEEE
Q 013384 162 EIVVDATDN--APSRYMISDCCVVLG-KPLVS 190 (444)
Q Consensus 162 DvVi~~~D~--~~~r~~i~~~~~~~~-~p~i~ 190 (444)
|+||.+... ......+-++|.+.+ ++.+.
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 999998874 344456667788777 66543
No 155
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.51 E-value=0.0093 Score=61.19 Aligned_cols=93 Identities=18% Similarity=0.245 Sum_probs=65.5
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHH-h-hcCCCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNAL-E-ILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~-~-~~~~~DvVi~~~D~~ 171 (444)
-||+|+|+|-+|..+|+.|...|. .+++||.|.-....+.. ...+..+....+..... + -++++|++|.+|++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~---~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN-DITIVDKDGDRLRELQD---KYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHH---HSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH---hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 379999999999999999988874 79999988544333322 22344454544433322 2 258899999999998
Q ss_pred HhHHHHHHHHHHc-CCcEEE
Q 013384 172 PSRYMISDCCVVL-GKPLVS 190 (444)
Q Consensus 172 ~~r~~i~~~~~~~-~~p~i~ 190 (444)
++-..+...|+.. +.+-+-
T Consensus 80 e~Nl~~~~~Ak~~~~~~~~i 99 (461)
T 4g65_A 80 ETNMAACQVAFTLFNTPNRI 99 (461)
T ss_dssp HHHHHHHHHHHHHHCCSSEE
T ss_pred HHHHHHHHHHHHhcCCccce
Confidence 8888888888764 666543
No 156
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.51 E-value=0.0092 Score=56.71 Aligned_cols=74 Identities=19% Similarity=0.277 Sum_probs=49.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhc-CCCcEEEEc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEIL-SQYEIVVDA 167 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~-~~~DvVi~~ 167 (444)
.+++++|+|+|+||+|..++..|+..| .+++++|.+.-....+.. +.....+...+. .++. ..+|+||+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~-------~~~~~~~~DivIn~ 187 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSM-------DSIPLQTYDLVINA 187 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-------GGCCCSCCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHccccCCeEEeeH-------HHhccCCCCEEEEC
Confidence 357889999999999999999999999 899999876533333322 211112222211 1111 389999999
Q ss_pred cCCh
Q 013384 168 TDNA 171 (444)
Q Consensus 168 ~D~~ 171 (444)
+-..
T Consensus 188 t~~~ 191 (272)
T 1p77_A 188 TSAG 191 (272)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 8754
No 157
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.49 E-value=0.015 Score=55.66 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=56.6
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEE----EeecCC---cccHHhhcCCCcEEEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIE----HREALR---TSNALEILSQYEIVVD 166 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~----~~~~~~---~~~~~~~~~~~DvVi~ 166 (444)
.+|+|||+|.+|+.++..|+..|. +++++|.+.-....+... ...+.. ....+. ..+..+.++++|+||.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN--GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH--CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC--CEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 479999999999999999999996 789988753211111110 111110 111111 1112223348999999
Q ss_pred ccCChHhHHHHHHHHHH--cCCcEEEE
Q 013384 167 ATDNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
|+-....+..+...... .+..+|+.
T Consensus 81 ~v~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LTKAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EeccccHHHHHHHHHHhcCCCCEEEEe
Confidence 99876666666555432 24556665
No 158
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.49 E-value=0.019 Score=55.79 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=54.2
Q ss_pred hhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcce-EEEEeecCCcccHHhhcCCCcEEEE
Q 013384 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVH-IIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 90 ~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~-v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
.|.+++|+|||.|. +|..+|++|...|. +++++|.+.+..-.... +..... ...+. ..+.++..+.+..+|+||.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~-~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLG-EYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEE-ECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccc-cccHhHHHHHhccCCEEEE
Confidence 67899999999997 59999999999995 69998876544322222 111100 00000 0112566788899999999
Q ss_pred ccCChH
Q 013384 167 ATDNAP 172 (444)
Q Consensus 167 ~~D~~~ 172 (444)
|+-.+.
T Consensus 252 Atg~p~ 257 (320)
T 1edz_A 252 GVPSEN 257 (320)
T ss_dssp CCCCTT
T ss_pred CCCCCc
Confidence 998753
No 159
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.48 E-value=0.045 Score=52.07 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=59.6
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA- 171 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~- 171 (444)
.+|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-....+ ..+. ++.+...+......+.++. |+||.+....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~--~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~ 74 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREF--VNPS--AELHVRDLKDYSWGAGIKG-DVVFHFAANPE 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSCCGGG--SCTT--SEEECCCTTSTTTTTTCCC-SEEEECCSSCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCchhh--cCCC--ceEEECccccHHHHhhcCC-CEEEECCCCCC
Confidence 36999997 7799999999999996 677776532211110 2233 3344445554335555666 9999876421
Q ss_pred --------H--------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 172 --------P--------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 172 --------~--------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
. .-..+.++|.+.+. .+|+.+.....|
T Consensus 75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg 118 (312)
T 3ko8_A 75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG 118 (312)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhC
Confidence 1 11245566666665 577766554443
No 160
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.47 E-value=0.027 Score=54.43 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=57.8
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--cc---CcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--IN---STVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--ln---p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+|+|+|+|++|+.++..|+++|. .++++|.+.. .-+.+ ++ +.-.+...+..+. .+. +.+..+|+||.|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~--~~i~~~g~~~~~~~g~~~~~~~~~~-~~~-~~~~~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRDY--EAIAGNGLKVFSINGDFTLPHVKGY-RAP-EEIGPMDLVLVGL 77 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTTH--HHHHHTCEEEEETTCCEEESCCCEE-SCH-HHHCCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCcH--HHHHhCCCEEEcCCCeEEEeeceee-cCH-HHcCCCCEEEEec
Confidence 589999999999999999999995 7999988653 11211 11 1111111011111 122 2357899999999
Q ss_pred CChHhHHHHHHHHHH--cCCcEEEE
Q 013384 169 DNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 169 D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
-....+..+....-. .+.++|+.
T Consensus 78 k~~~~~~~l~~l~~~l~~~~~iv~l 102 (312)
T 3hn2_A 78 KTFANSRYEELIRPLVEEGTQILTL 102 (312)
T ss_dssp CGGGGGGHHHHHGGGCCTTCEEEEC
T ss_pred CCCCcHHHHHHHHhhcCCCCEEEEe
Confidence 888777766666432 24455553
No 161
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.46 E-value=0.064 Score=49.12 Aligned_cols=101 Identities=10% Similarity=0.088 Sum_probs=64.3
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCC
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~ 170 (444)
.++|+|.| .|++|..+++.|+..|--++.+++.+.-....+ ..+ .++.+...+++ +.....++++|+||.+...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--~~~--~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--YPT--NSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--CCT--TEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--ccC--CcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 46799999 688999999999999944777877654322211 111 35555556654 4456778899999987654
Q ss_pred hHhH---HHHHHHHHHcCC-cEEEEcccCCc
Q 013384 171 APSR---YMISDCCVVLGK-PLVSGAALGLE 197 (444)
Q Consensus 171 ~~~r---~~i~~~~~~~~~-p~i~~~~~g~~ 197 (444)
.... ..+-+.+.+.+. .+|+.+..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~ 129 (236)
T 3qvo_A 99 EDLDIQANSVIAAMKACDVKRLIFVLSLGIY 129 (236)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred CchhHHHHHHHHHHHHcCCCEEEEEecceec
Confidence 3221 234455666665 47776655443
No 162
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.44 E-value=0.0051 Score=58.84 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=50.8
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-cc--CcceEEEEeecCCc-ccHHhhcCCCcEEE
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-IN--STVHIIEHREALRT-SNALEILSQYEIVV 165 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-ln--p~~~v~~~~~~~~~-~~~~~~~~~~DvVi 165 (444)
+++++|+|+| +||+|..++..|+..|.. +.++|.+.-....+.. +. +.+.+.. ..++. +...+.++.+|+||
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVTA--AETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCEE--EECCSHHHHHHHTTTCSEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhcCCcEEEE--ecCCCHHHHHHHHHhCCEEE
Confidence 6788999999 999999999999999985 9998876322211211 11 1222222 23332 33456678899999
Q ss_pred EccC
Q 013384 166 DATD 169 (444)
Q Consensus 166 ~~~D 169 (444)
+++.
T Consensus 194 n~ag 197 (287)
T 1lu9_A 194 TAGA 197 (287)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9885
No 163
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.40 E-value=0.023 Score=51.86 Aligned_cols=68 Identities=13% Similarity=0.189 Sum_probs=46.4
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
..+|+|||+|.+|+.++..|+..|. ++.++|.+.-....+.. ..+.+ . +..+.++++|+||.|+-...
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r~~~~~~~~~~--~g~~~--~-------~~~~~~~~~DvVi~av~~~~ 95 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSRNPKRTARLFP--SAAQV--T-------FQEEAVSSPEVIFVAVFREH 95 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSHHHHHHHSB--TTSEE--E-------EHHHHTTSCSEEEECSCGGG
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH--cCCce--e-------cHHHHHhCCCEEEECCChHH
Confidence 3589999999999999999999996 68888865322111111 12222 1 33456788999999987543
No 164
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.39 E-value=0.016 Score=57.35 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=61.0
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--cc----CcceEEEEeecCC-cccHHhhcCCCcEEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--IN----STVHIIEHREALR-TSNALEILSQYEIVV 165 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--ln----p~~~v~~~~~~~~-~~~~~~~~~~~DvVi 165 (444)
..+|.|||+|.+|+.++..|+..|. +++++|.+.-....+++ .| |.+.+ +..+. ..+..+.++++|+||
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l---~~~i~~t~d~~ea~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPF---PETLKAYCDLKASLEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCC---CTTEEEESCHHHHHTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCcc---CCCeEEECCHHHHHhcCCEEE
Confidence 3589999999999999999999995 68899886432222222 22 33221 11111 123445678999999
Q ss_pred EccCChHhHHHHHHHHHH--cCCcEEEE
Q 013384 166 DATDNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
.|+-....+..+.+.... .+.++|+.
T Consensus 105 laVp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 105 IVVPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp ECCCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ECCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 999776666666655432 24455654
No 165
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.38 E-value=0.0097 Score=58.96 Aligned_cols=78 Identities=15% Similarity=0.287 Sum_probs=52.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccc-cCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRI-NSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rl-np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.++.++|+|+|+|++|..+++.|...|. +++++|.+.-....+..+ ...+.+ .. ...++..+.+.++|+||+|+
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVEL--LY--SNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEE--EE--CCHHHHHHHHHTCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEe--ee--CCHHHHHHHHcCCCEEEECC
Confidence 3778999999999999999999999999 899998753221111111 111211 11 11233445567899999999
Q ss_pred CChH
Q 013384 169 DNAP 172 (444)
Q Consensus 169 D~~~ 172 (444)
-.+.
T Consensus 239 ~~~~ 242 (361)
T 1pjc_A 239 LVPG 242 (361)
T ss_dssp CCTT
T ss_pred CcCC
Confidence 6543
No 166
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.38 E-value=0.079 Score=51.24 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=61.1
Q ss_pred HhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc-ccccccccCcceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE-LNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 89 ~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~-~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
..++.++|+|.|+ |.+|+.+++.|+..|. ++.++|...-. ..++..+.....++.+...+... .+.++|+||.
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~d~vih 97 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP----LYIEVDQIYH 97 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC----CCCCCSEEEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccchhhhhhhccCCceEEEeCccCCh----hhcCCCEEEE
Confidence 3466789999997 7799999999999985 67777754211 11222211122344444444322 3567999998
Q ss_pred ccCCh---------Hh--------HHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 167 ATDNA---------PS--------RYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 167 ~~D~~---------~~--------r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+.... .. -..+-++|.+.++.+|..+..+..|
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 76421 10 1234556777777888776554444
No 167
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=95.37 E-value=0.042 Score=53.60 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=58.1
Q ss_pred HhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc--ccccccccCcceEEEEeecCCc-ccHHhhcC-----
Q 013384 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHRINSTVHIIEHREALRT-SNALEILS----- 159 (444)
Q Consensus 89 ~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~----- 159 (444)
..+++++|+|.|+ |.+|+.+++.|+..|.-++.++|...-. ..++.. +. +...++. +....+++
T Consensus 42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~----~~---~~~d~~~~~~~~~~~~~~~~~ 114 (357)
T 2x6t_A 42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----LN---IADYMDKEDFLIQIMAGEEFG 114 (357)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTT----SC---CSEEEEHHHHHHHHHTTCCCS
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccC----ce---EeeecCcHHHHHHHHhhcccC
Confidence 4567789999997 7799999999999996678888764321 112211 11 1112221 22334444
Q ss_pred CCcEEEEccCC-------hH--------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 160 QYEIVVDATDN-------AP--------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 160 ~~DvVi~~~D~-------~~--------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
++|+||.+... +. .-..+.++|...++.+|+.+.....|
T Consensus 115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g 168 (357)
T 2x6t_A 115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 168 (357)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGC
T ss_pred CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhC
Confidence 59999987542 11 11345566766666788776554433
No 168
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.37 E-value=0.016 Score=55.28 Aligned_cols=99 Identities=23% Similarity=0.283 Sum_probs=56.0
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcc----cccccccccCcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVV----ELNNMHRINSTVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V----~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
.++.++|+|.|+ |.+|+.+++.|+..|. ++.++|...- ...++..+... ..+. -...-+.++|+|
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~--~~~~Dl~~~d~v 73 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLEK-------PVLE--LEERDLSDVRLV 73 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEECS-------CGGG--CCHHHHTTEEEE
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhccC-------CCee--EEeCccccCCEE
Confidence 356789999997 7799999999999996 6777765443 22222221000 0000 001112378999
Q ss_pred EEccCCh----------------HhHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 165 VDATDNA----------------PSRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 165 i~~~D~~----------------~~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
|.+.... ..-..+-++|.+.++ .+|+.+..+..|
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~ 124 (321)
T 3vps_A 74 YHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYG 124 (321)
T ss_dssp EECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred EECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhC
Confidence 9876421 112345667777774 677766554443
No 169
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.35 E-value=0.076 Score=51.02 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=64.2
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCC-CcEEEeeCCcc--cccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEc
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGV-GRLGIVDHDVV--ELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDA 167 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gv-g~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~ 167 (444)
+.+|+|.| .|++|+.+++.|+..|- -++.++|...- ...++..+.....++.+...++. +...+++.++|+||.+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 45799999 58899999999999984 37777775431 11222222222345555556654 3345666889999988
Q ss_pred cCChH-----------------hHHHHHHHHHHcC--CcEEEEcccCCcc
Q 013384 168 TDNAP-----------------SRYMISDCCVVLG--KPLVSGAALGLEG 198 (444)
Q Consensus 168 ~D~~~-----------------~r~~i~~~~~~~~--~p~i~~~~~g~~G 198 (444)
..... .-..+.++|...+ ..+|+.+.....|
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 65321 1123445666554 3677766544333
No 170
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.35 E-value=0.014 Score=55.91 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=49.6
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-H
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-P 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~ 172 (444)
.+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .+. ...+..+.++++|+||.|+-.+ .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~--g~~--------~~~~~~~~~~~aDvvi~~vp~~~~ 72 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA--GAS--------AARSARDAVQGADVVISMLPASQH 72 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT--TCE--------ECSSHHHHHTTCSEEEECCSCHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC--CCe--------EcCCHHHHHhCCCeEEEECCCHHH
Confidence 579999999999999999999997 788888654221111111 111 1134456678899999998544 4
Q ss_pred hHHHHH
Q 013384 173 SRYMIS 178 (444)
Q Consensus 173 ~r~~i~ 178 (444)
.+..+.
T Consensus 73 ~~~v~~ 78 (302)
T 2h78_A 73 VEGLYL 78 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 555444
No 171
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.33 E-value=0.012 Score=56.83 Aligned_cols=87 Identities=18% Similarity=0.107 Sum_probs=59.4
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|...-+ . ......+..++++.+|+|+.++-
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~~~~-~---------------~~~~~~~l~ell~~aDvV~l~~P 183 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-G---------------PWRFTNSLEEALREARAAVCALP 183 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-S---------------SSCCBSCSHHHHTTCSEEEECCC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCccc-c---------------CcccCCCHHHHHhhCCEEEEeCc
Confidence 6899999999999999999999999996 57777753221 0 01112345678899999998875
Q ss_pred C-hHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 170 N-APSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 170 ~-~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
. ..++..+++... +.+.-+|+.+.
T Consensus 184 ~~~~t~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 184 LNKHTRGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred CchHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 4 456666653322 23445777654
No 172
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.27 E-value=0.031 Score=54.28 Aligned_cols=90 Identities=13% Similarity=0.091 Sum_probs=56.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----cccc-ccCcceEEEEeecCCcc-cHHhhcCCCcEEEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMHR-INSTVHIIEHREALRTS-NALEILSQYEIVVD 166 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~R-lnp~~~v~~~~~~~~~~-~~~~~~~~~DvVi~ 166 (444)
..+|.|||+|.+|+.++..|+..|.-+++++|.+.-.+. .+.+ ....+ .. +..+.++++|+||.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~----------~~~s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV----------EPLDDVAGIACADVVLS 93 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC----------EEESSGGGGGGCSEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC----------CCCCHHHHHhcCCEEEE
Confidence 368999999999999999999999558889887641110 0111 11111 11 23455677899988
Q ss_pred ccCChHhHHHHHHHHHH--cCCcEEEEc
Q 013384 167 ATDNAPSRYMISDCCVV--LGKPLVSGA 192 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~--~~~p~i~~~ 192 (444)
|+-.......+...... .+..+|+.+
T Consensus 94 avp~~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 94 LVVGAATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp CCCGGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred ecCCHHHHHHHHHHHhhcCCCCEEEECC
Confidence 88776665555444322 234455544
No 173
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.26 E-value=0.016 Score=55.28 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=48.1
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC-ChHh
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD-NAPS 173 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D-~~~~ 173 (444)
+|.|||+|.+|+.++..|+..|. ++.++|.+.-....+... .+. . . .+..+.+.++|+||.|+- ....
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~--g~~--~-----~-~~~~~~~~~~Dvvi~~vp~~~~~ 70 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDA--GEQ--V-----V-SSPADVAEKADRIITMLPTSINA 70 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTT--TCE--E-----C-SSHHHHHHHCSEEEECCSSHHHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc--CCe--e-----c-CCHHHHHhcCCEEEEeCCCHHHH
Confidence 69999999999999999999996 688888653221111111 111 1 1 233455677999999984 4455
Q ss_pred HHHHHH
Q 013384 174 RYMISD 179 (444)
Q Consensus 174 r~~i~~ 179 (444)
+..+..
T Consensus 71 ~~v~~~ 76 (296)
T 2gf2_A 71 IEAYSG 76 (296)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 555543
No 174
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.25 E-value=0.011 Score=55.62 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=47.8
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++ +|+|||+|++|..++..|...|+ +++++|.+.-....+.. +.. . + .+..+. .++|+||.|+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~~~~~~~l~~~~~~----~-~------~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRTPQRALALAEEFGL----R-A------VPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHHTC----E-E------CCGGGG-GGCSEEEECS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcc----c-h------hhHhhc-cCCCEEEEcc
Confidence 3677 99999999999999999999998 89999876422222211 111 1 1 123344 7899999998
Q ss_pred CCh
Q 013384 169 DNA 171 (444)
Q Consensus 169 D~~ 171 (444)
-..
T Consensus 180 p~~ 182 (263)
T 2d5c_A 180 RVG 182 (263)
T ss_dssp STT
T ss_pred CCC
Confidence 764
No 175
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.23 E-value=0.026 Score=54.48 Aligned_cols=77 Identities=8% Similarity=0.197 Sum_probs=49.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
..+..+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .+. . ..+..+.++++|+||.|+-
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~--g~~-------~-~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEH--GAS-------V-CESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT--TCE-------E-CSSHHHHHHHCSEEEECCS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC--CCe-------E-cCCHHHHHHhCCEEEEEcC
Confidence 3444689999999999999999999997 788888764322222111 110 0 1234455667788887775
Q ss_pred Ch-HhHHHH
Q 013384 170 NA-PSRYMI 177 (444)
Q Consensus 170 ~~-~~r~~i 177 (444)
++ ..+..+
T Consensus 87 ~~~~~~~v~ 95 (310)
T 3doj_A 87 DPCAALSVV 95 (310)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 54 344333
No 176
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.22 E-value=0.048 Score=51.78 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=59.6
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccc----c---cccc-ccCcceEEEEeecCCc-ccHHhhcCCCc
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVEL----N---NMHR-INSTVHIIEHREALRT-SNALEILSQYE 162 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~----s---Nl~R-lnp~~~v~~~~~~~~~-~~~~~~~~~~D 162 (444)
.++|+|.|+ |.+|+.+++.|+..|. ++.+++.+.-.. + .+.. ..+.+ +.+...++. +.....++++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v--~~v~~D~~d~~~l~~~~~~~d 78 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGV--ILLEGDINDHETLVKAIKQVD 78 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTC--EEEECCTTCHHHHHHHHTTCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCC--EEEEeCCCCHHHHHHHHhCCC
Confidence 468999996 8899999999999994 677777654110 0 1111 12333 344445543 44567788999
Q ss_pred EEEEccCCh--HhHHHHHHHHHHcC-CcE
Q 013384 163 IVVDATDNA--PSRYMISDCCVVLG-KPL 188 (444)
Q Consensus 163 vVi~~~D~~--~~r~~i~~~~~~~~-~p~ 188 (444)
+||.+.... .....+-++|.+.+ ++.
T Consensus 79 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 107 (307)
T 2gas_A 79 IVICAAGRLLIEDQVKIIKAIKEAGNVKK 107 (307)
T ss_dssp EEEECSSSSCGGGHHHHHHHHHHHCCCSE
T ss_pred EEEECCcccccccHHHHHHHHHhcCCceE
Confidence 999987642 33445666777776 543
No 177
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.22 E-value=0.013 Score=57.89 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=67.2
Q ss_pred hhccccCCCCCHHHH----HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecC
Q 013384 74 YSRHLLLPSFGVEGQ----SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREAL 149 (444)
Q Consensus 74 y~Rq~~l~~~g~~~q----~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~ 149 (444)
|+++++--.|..... ..|.+++|.|||+|.+|..+|+.|...|.. +..+|.......-.... .+..
T Consensus 141 ~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr~~~~~~~~~~~----g~~~----- 210 (351)
T 3jtm_A 141 GYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDRLQMAPELEKET----GAKF----- 210 (351)
T ss_dssp HHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECSSCCCHHHHHHH----CCEE-----
T ss_pred HHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCCCccCHHHHHhC----CCeE-----
Confidence 344444334654332 358999999999999999999999999984 77777543211100000 0111
Q ss_pred CcccHHhhcCCCcEEEEccC-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 150 RTSNALEILSQYEIVVDATD-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 150 ~~~~~~~~~~~~DvVi~~~D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
.++..++++.+|+|+.++- ++.++..++..... .+.-+|+.+
T Consensus 211 -~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 211 -VEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp -CSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred -cCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 1356788899999998875 55677666544332 344477765
No 178
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.19 E-value=0.016 Score=55.57 Aligned_cols=81 Identities=10% Similarity=0.173 Sum_probs=51.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPS 173 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~ 173 (444)
.+|+|||+|++|+.++..|+++|. +++++|.+.-.. .+.+.+-..... +..+....+..++|+||.|+-....
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~~~~~-~~~~~~g~~~~~-----~~~~~~~~~~~~~D~vilavk~~~~ 75 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRHAKTI-TYYTVPHAPAQD-----IVVKGYEDVTNTFDVIIIAVKTHQL 75 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESSCEEE-EEESSTTSCCEE-----EEEEEGGGCCSCEEEEEECSCGGGH
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeccCcE-EEEecCCeeccc-----eecCchHhcCCCCCEEEEeCCccCH
Confidence 589999999999999999999995 788988762110 011111111111 1111122223789999999988777
Q ss_pred HHHHHHHH
Q 013384 174 RYMISDCC 181 (444)
Q Consensus 174 r~~i~~~~ 181 (444)
+..+.+..
T Consensus 76 ~~~l~~l~ 83 (294)
T 3g17_A 76 DAVIPHLT 83 (294)
T ss_dssp HHHGGGHH
T ss_pred HHHHHHHH
Confidence 76665554
No 179
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.19 E-value=0.016 Score=55.76 Aligned_cols=72 Identities=17% Similarity=0.289 Sum_probs=51.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|||+|.+|..+++.|...|. ++.++|.+.-....+... .+ ..+. ..+..++++++|+|+.++.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~--g~--~~~~----~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEM--GL--VPFH----TDELKEHVKDIDICINTIP 224 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT--TC--EEEE----GGGHHHHSTTCSEEEECCS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC--CC--eEEc----hhhHHHHhhCCCEEEECCC
Confidence 4788999999999999999999999998 899998754211111011 11 1111 1345677889999999987
Q ss_pred C
Q 013384 170 N 170 (444)
Q Consensus 170 ~ 170 (444)
.
T Consensus 225 ~ 225 (300)
T 2rir_A 225 S 225 (300)
T ss_dssp S
T ss_pred h
Confidence 5
No 180
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.18 E-value=0.025 Score=54.01 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=55.5
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-H
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-P 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~ 172 (444)
.+|.|||+|.+|+.++..|+..|. ++.++|.+.-....+... .+. . ..+..+.+.++|+||.|+-.+ .
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~--g~~--~------~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQ--GAQ--A------CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTT--TCE--E------CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC--CCe--e------cCCHHHHHhCCCEEEEECCCHHH
Confidence 579999999999999999999997 688887653221111111 111 1 123445567899999999544 4
Q ss_pred hHHHHH---HHH--HHcCCcEEEEc
Q 013384 173 SRYMIS---DCC--VVLGKPLVSGA 192 (444)
Q Consensus 173 ~r~~i~---~~~--~~~~~p~i~~~ 192 (444)
.+..+. +.. ...+..+|+.+
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~ 98 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMS 98 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred HHHHHcCcchHhhcCCCCCEEEECC
Confidence 555553 332 23456677654
No 181
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.16 E-value=0.044 Score=52.09 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=58.3
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHc-CCCcEEEeeCCcc--ccccccc---ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 93 KSSILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVV--ELNNMHR---INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~-Gvg~i~lvD~D~V--~~sNl~R---lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.-||+|+| +|.+|..+++.+... ++.-+.++|...- .-.++.. +.+.+ .+ .++..+++.++|+||
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv-------~v-~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGV-------AL-TDDIERVCAEADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSC-------BC-BCCHHHHHHHCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCc-------ee-cCCHHHHhcCCCEEE
Confidence 45899999 799999999998864 3333444565321 0111111 11111 11 245566677899999
Q ss_pred EccCChHhHHHHHHHHHHcCCcEEEEc
Q 013384 166 DATDNAPSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~~~~p~i~~~ 192 (444)
|+| .+..-...-..|.++++|+|.+.
T Consensus 79 DfT-~p~a~~~~~~~al~~G~~vVigT 104 (272)
T 4f3y_A 79 DFT-LPEGTLVHLDAALRHDVKLVIGT 104 (272)
T ss_dssp ECS-CHHHHHHHHHHHHHHTCEEEECC
T ss_pred EcC-CHHHHHHHHHHHHHcCCCEEEEC
Confidence 999 45555667778999999999743
No 182
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.16 E-value=0.079 Score=51.12 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=61.2
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccc-ccccccccCcceEEEEeecCCcc-cHHhhcCC--CcEE
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVE-LNNMHRINSTVHIIEHREALRTS-NALEILSQ--YEIV 164 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~-~sNl~Rlnp~~~v~~~~~~~~~~-~~~~~~~~--~DvV 164 (444)
.++.++|+|.| .|++|+.+++.|+..| -++.++|.+.-. ..++..+ + .++.+...++.. ...+++++ +|+|
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~l~~~-~--~~~~~~~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNFATGRREHLKDH-P--NLTFVEGSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGSCCC-T--TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCCccchhhHhhc-C--CceEEEEeCCCHHHHHHHHhccCCcEE
Confidence 34567899998 5779999999999999 477777764321 1111111 2 345555555543 34456666 9999
Q ss_pred EEccCCh--------------HhHHHHHHHHHHcCC-cEEEEcccC
Q 013384 165 VDATDNA--------------PSRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 165 i~~~D~~--------------~~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
|.+.... ..-..+.++|...++ .+|+.+..+
T Consensus 94 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~ 139 (333)
T 2q1w_A 94 VHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL 139 (333)
T ss_dssp EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred EECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence 9876421 112345566766665 677766543
No 183
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.15 E-value=0.019 Score=55.69 Aligned_cols=94 Identities=19% Similarity=0.114 Sum_probs=57.8
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----ccC--cceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR----INS--TVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R----lnp--~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
.+|+|+|+|++|+.++..|+++|. .++++|.+.. ..+.+ ++. .-.+...+..+. .+..+..+++|+||.|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~-~~~~~~~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVV-RSAAELETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEE-SCGGGCSSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeE-CCHHHcCCCCCEEEEe
Confidence 589999999999999999999995 8999988753 22221 221 111111111111 2223344589999999
Q ss_pred cCChHhHHHHHHHHH--HcCCcEEEE
Q 013384 168 TDNAPSRYMISDCCV--VLGKPLVSG 191 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~--~~~~p~i~~ 191 (444)
+-....+..+....- ..+.++|+.
T Consensus 79 vK~~~~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 79 IKVVEGADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp CCCCTTCCHHHHHTTSCCTTCEEEEE
T ss_pred cCCCChHHHHHHHHhhcCCCCEEEEe
Confidence 988776665555532 223455553
No 184
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.15 E-value=0.036 Score=52.78 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=54.0
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCC--CcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGV--GRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gv--g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+..+|.|||+|.+|+.++..|+..|. .++.++|.+.-....+.. ...+... .+..+.++++|+||.|+.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---~~gi~~~------~~~~~~~~~aDvVilav~ 72 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---KCGVHTT------QDNRQGALNADVVVLAVK 72 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---TTCCEEE------SCHHHHHSSCSEEEECSC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---HcCCEEe------CChHHHHhcCCeEEEEeC
Confidence 34689999999999999999999996 379998865432222111 1111111 234566789999999996
Q ss_pred ChHhHHHHHHHH
Q 013384 170 NAPSRYMISDCC 181 (444)
Q Consensus 170 ~~~~r~~i~~~~ 181 (444)
....+..+.+..
T Consensus 73 p~~~~~vl~~l~ 84 (280)
T 3tri_A 73 PHQIKMVCEELK 84 (280)
T ss_dssp GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555554
No 185
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.15 E-value=0.044 Score=55.32 Aligned_cols=89 Identities=15% Similarity=0.272 Sum_probs=63.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHH-hh-cCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNAL-EI-LSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~-~~-~~~~DvVi~~~D~ 170 (444)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|.-....+.+. . +..+....+..... .. +.++|+||.++++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~--g--~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF--G--MKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT--T--CCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC--C--CeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 3579999999999999999999996 789999875443332221 1 22333344433322 22 5789999999999
Q ss_pred hHhHHHHHHHHHHcCC
Q 013384 171 APSRYMISDCCVVLGK 186 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~ 186 (444)
...-..+-..++..+.
T Consensus 79 ~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 79 PQTNLQLTEMVKEHFP 94 (413)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHhCC
Confidence 9888888888887764
No 186
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.11 E-value=0.058 Score=52.47 Aligned_cols=80 Identities=18% Similarity=0.178 Sum_probs=51.1
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCc-ccHHhhcCC--CcE
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRT-SNALEILSQ--YEI 163 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~-~~~~~~~~~--~Dv 163 (444)
..+++++|+|.| .|.+|+.+++.|+..|. ++.++|.+.-....+.. +...-.++.+...+.. +...++++. +|+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 356788999999 57899999999999995 78887765432222211 1111233444455553 334455554 899
Q ss_pred EEEccC
Q 013384 164 VVDATD 169 (444)
Q Consensus 164 Vi~~~D 169 (444)
||.+..
T Consensus 84 vih~A~ 89 (357)
T 1rkx_A 84 VFHMAA 89 (357)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 998865
No 187
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.11 E-value=0.029 Score=53.35 Aligned_cols=88 Identities=13% Similarity=0.177 Sum_probs=54.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-H
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-P 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~ 172 (444)
.+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .+ .. ..+..+.++++|+||.|+-++ .
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~--~~------~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAAL--GA--ER------AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT--TC--EE------CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC--CC--ee------cCCHHHHHhcCCEEEEEcCCHHH
Confidence 579999999999999999999995 788888754322221111 11 00 124455667789999888754 4
Q ss_pred hHHHH---HHHH--HHcCCcEEEEc
Q 013384 173 SRYMI---SDCC--VVLGKPLVSGA 192 (444)
Q Consensus 173 ~r~~i---~~~~--~~~~~p~i~~~ 192 (444)
.+..+ .... ...+..+|+.+
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCC
Confidence 44444 2222 22345566654
No 188
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=95.08 E-value=0.017 Score=56.75 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=59.4
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-. .. . ....+. ..+..++++.+|+|+.++
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~-~-~~~g~~---------~~~l~ell~~aDvV~l~~ 227 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EV-S-ASFGVQ---------QLPLEEIWPLCDFITVHT 227 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HH-H-HHTTCE---------ECCHHHHGGGCSEEEECC
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hh-h-hhcCce---------eCCHHHHHhcCCEEEEec
Confidence 36899999999999999999999998885 57777753211 00 0 000111 124567788999999887
Q ss_pred CC-hHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 169 DN-APSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 169 D~-~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
-. ..++..+++.... .+.-+|+.+.
T Consensus 228 P~t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 54 4567666543322 2334677654
No 189
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=95.07 E-value=0.034 Score=57.26 Aligned_cols=106 Identities=15% Similarity=0.232 Sum_probs=72.8
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHH----cCC------CcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAA----CGV------GRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL 158 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~----~Gv------g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~ 158 (444)
.+|++.||++.|+|..|..+|+.|.. .|+ ++|.++|..-+=..+-.-+++.-.--+.... ...+..+.+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~-~~~~L~eav 356 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHC-EMKNLEDIV 356 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCC-CCCCHHHHH
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcC-CCCCHHHHH
Confidence 57999999999999999999999988 896 7999999876643321113322110011101 112466677
Q ss_pred C--CCcEEEEccC--ChHhHHHHHHHHHHcCCcEEEEcccC
Q 013384 159 S--QYEIVVDATD--NAPSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 159 ~--~~DvVi~~~D--~~~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
+ +.|+.|.++- ..=+...|..++.....|+|++-+..
T Consensus 357 ~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 397 (555)
T 1gq2_A 357 KDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 397 (555)
T ss_dssp HHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred hhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 6 5999998874 33456788888888889999875443
No 190
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.07 E-value=0.022 Score=54.14 Aligned_cols=87 Identities=13% Similarity=0.172 Sum_probs=56.7
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
.+|.|||+ |.+|+.++..|+..|. +++++|.+.-....+... .+. .. +..+.+.++|+||.|+-...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~--g~~-------~~--~~~~~~~~aDvVi~av~~~~ 79 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM--GIP-------LT--DGDGWIDEADVVVLALPDNI 79 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT--TCC-------CC--CSSGGGGTCSEEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc--CCC-------cC--CHHHHhcCCCEEEEcCCchH
Confidence 47999999 9999999999999996 788888653221111111 111 11 22345678999999997766
Q ss_pred hHHHHHHHHHH--cCCcEEEEc
Q 013384 173 SRYMISDCCVV--LGKPLVSGA 192 (444)
Q Consensus 173 ~r~~i~~~~~~--~~~p~i~~~ 192 (444)
.+..+.+.... .+..+|+.+
T Consensus 80 ~~~v~~~l~~~l~~~~ivv~~s 101 (286)
T 3c24_A 80 IEKVAEDIVPRVRPGTIVLILD 101 (286)
T ss_dssp HHHHHHHHGGGSCTTCEEEESC
T ss_pred HHHHHHHHHHhCCCCCEEEECC
Confidence 66666555422 345566643
No 191
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.06 E-value=0.023 Score=54.22 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=56.8
Q ss_pred hhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.|++++|+|||.|+ +|.+++..|...|. ++++++. ...+..+.++.+|+||.++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs------------------------~t~~L~~~~~~ADIVI~Av 212 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHR------------------------FTTDLKSHTTKADILIVAV 212 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT------------------------TCSSHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeC------------------------CchhHHHhcccCCEEEECC
Confidence 57899999999998 79999999999998 5677532 1245667889999999999
Q ss_pred CChHhHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
..+.. +..-..+.+.-+|+.+.....|
T Consensus 213 g~p~~---I~~~~vk~GavVIDvgi~~~~g 239 (285)
T 3l07_A 213 GKPNF---ITADMVKEGAVVIDVGINHVDG 239 (285)
T ss_dssp CCTTC---BCGGGSCTTCEEEECCCEEETT
T ss_pred CCCCC---CCHHHcCCCcEEEEecccCcCC
Confidence 76532 1112224455567766544333
No 192
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.05 E-value=0.013 Score=57.49 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=59.8
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. +... + ... ++..++++.+|+|+.++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~---~-------~~~-~~l~ell~~aDvV~l~~ 207 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK---G-------YYV-DSLDDLYKQADVISLHV 207 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT---T-------CBC-SCHHHHHHHCSEEEECS
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh---C-------eec-CCHHHHHhhCCEEEEcC
Confidence 36899999999999999999999999997 677777543211 0000 0 011 24567788999999887
Q ss_pred CC-hHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 169 DN-APSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 169 D~-~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
-. +.++..+++... +.+.-+|+.+.
T Consensus 208 p~~~~t~~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 208 PDVPANVHMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp CCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred CCcHHHHHHHhHHHHhhCCCCcEEEECCC
Confidence 53 456665644322 23444777654
No 193
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.03 E-value=0.048 Score=50.86 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=50.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC---CcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV---GRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv---g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
..+|.|||+|.+|+.++..|+..|. ..+.++|.+.-. ..+. +. .+..+.+.++|+||.|+-
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~--------~g~~-------~~-~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN--------TTLN-------YM-SSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS--------SSSE-------EC-SCHHHHHHHCSEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc--------CceE-------Ee-CCHHHHHhcCCEEEEEeC
Confidence 3589999999999999999999995 588998765321 0111 11 233455678999999998
Q ss_pred ChHhHHHHHHH
Q 013384 170 NAPSRYMISDC 180 (444)
Q Consensus 170 ~~~~r~~i~~~ 180 (444)
....+..+.+.
T Consensus 68 ~~~~~~v~~~l 78 (262)
T 2rcy_A 68 PDIAGSVLNNI 78 (262)
T ss_dssp TTTHHHHHHHS
T ss_pred HHHHHHHHHHH
Confidence 65555555443
No 194
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.01 E-value=0.1 Score=50.21 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=61.6
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCChH
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~~~ 172 (444)
+|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-...++. .+ .++.+...+.. +...+.++++|+||.+.....
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~--~~--~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~ 89 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLA--YL--EPECRVAEMLDHAGLERALRGLDGVIFSAGYYP 89 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGG--GG--CCEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhc--cC--CeEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence 7999995 7899999999999984 7888876543222221 11 34445555553 345667889999998764211
Q ss_pred ---------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 173 ---------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 173 ---------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
.-..+.++|...++ .+|+.+.....|
T Consensus 90 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 90 SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 11345566776664 677776554443
No 195
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.99 E-value=0.012 Score=57.69 Aligned_cols=91 Identities=21% Similarity=0.228 Sum_probs=60.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. .. ...+ ......++++.+|+|+.++
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~---~~-~~g~---------~~~~l~ell~~aDvV~l~~ 202 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDVVKRED---LK-EKGC---------VYTSLDELLKESDVISLHV 202 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH---HH-HTTC---------EECCHHHHHHHCSEEEECC
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcC-EEEEECCCcchh---hH-hcCc---------eecCHHHHHhhCCEEEEeC
Confidence 46899999999999999999999999996 677777543211 00 0011 1122567788999999887
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
- ++.++..++..... .+.-+|+.+-
T Consensus 203 P~t~~t~~li~~~~l~~mk~gailIN~aR 231 (334)
T 2pi1_A 203 PYTKETHHMINEERISLMKDGVYLINTAR 231 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred CCChHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 5 45666666544332 3445777653
No 196
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.99 E-value=0.072 Score=51.18 Aligned_cols=103 Identities=15% Similarity=0.214 Sum_probs=57.4
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-----------c--cCcceEEEEeec-----CCcccH
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------I--NSTVHIIEHREA-----LRTSNA 154 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-----------l--np~~~v~~~~~~-----~~~~~~ 154 (444)
+.||.+||+|-.|.++|.+|+.+|. +++++|.+.-....+.. . ..++-+...+.. +.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~ 83 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMEL 83 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHH
Confidence 3579999999999999999999997 67777754322222211 1 111211111110 000112
Q ss_pred HhhcCCCcEEEEccC-ChHhHHHHHHHHHHcCCcEEEEcccCC
Q 013384 155 LEILSQYEIVVDATD-NAPSRYMISDCCVVLGKPLVSGAALGL 196 (444)
Q Consensus 155 ~~~~~~~DvVi~~~D-~~~~r~~i~~~~~~~~~p~i~~~~~g~ 196 (444)
...+..-++|||++- +|.+-..+.+.+...++-++++.+.|.
T Consensus 84 ~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 84 VEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp HHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred HhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 223345567776543 555666777777888888888766553
No 197
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.97 E-value=0.07 Score=50.36 Aligned_cols=91 Identities=11% Similarity=0.134 Sum_probs=56.8
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCC-cEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC-CCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS-QYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg-~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~-~~DvVi~~~D~~ 171 (444)
.+|.|||+|.+|+.++..|+..|.. ++.++|.+.-....+.+.. +.... ..+..+.+. ++|+||.|+-..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g--~~~~~------~~~~~~~~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG--IIDEG------TTSIAKVEDFSPDFVMLSSPVR 73 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT--SCSEE------ESCGGGGGGTCCSEEEECSCHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCC--Ccccc------cCCHHHHhcCCCCEEEEcCCHH
Confidence 4799999999999999999999863 6888887532211111111 10000 112335567 899999999877
Q ss_pred HhHHHHHHHHHH--cCCcEEEEc
Q 013384 172 PSRYMISDCCVV--LGKPLVSGA 192 (444)
Q Consensus 172 ~~r~~i~~~~~~--~~~p~i~~~ 192 (444)
.....+.+.... .+..+++.+
T Consensus 74 ~~~~v~~~l~~~l~~~~iv~~~~ 96 (281)
T 2g5c_A 74 TFREIAKKLSYILSEDATVTDQG 96 (281)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHHHHHHhhCCCCcEEEECC
Confidence 666666655322 344455533
No 198
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.97 E-value=0.065 Score=51.61 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=66.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-------------ccCcceEEEEeecCCcccHH-----
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-------------INSTVHIIEHREALRTSNAL----- 155 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-------------lnp~~~v~~~~~~~~~~~~~----- 155 (444)
++|.+||+|-.|.++|.+|+++|. .++++|.+.-....+.. .+.++-+...+. .+...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~---~~~v~~V~~~ 79 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA---SQHVEGLYLD 79 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSC---HHHHHHHHHS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCc---hHHHHHHHhc
Confidence 479999999999999999999996 67777754322111111 122222222211 11111
Q ss_pred -----hhcCCCcEEEEcc-CChHhHHHHHHHHHHcCCcEEEEcccCC-----cceEEEEeC
Q 013384 156 -----EILSQYEIVVDAT-DNAPSRYMISDCCVVLGKPLVSGAALGL-----EGQLTVYNY 205 (444)
Q Consensus 156 -----~~~~~~DvVi~~~-D~~~~r~~i~~~~~~~~~p~i~~~~~g~-----~G~l~~~~~ 205 (444)
..+.+=++|||++ -+|..-..+.+.+..+++-+|++.+.|. .|.+.++.-
T Consensus 80 ~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvG 140 (300)
T 3obb_A 80 DDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVG 140 (300)
T ss_dssp SSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEE
T ss_pred hhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEe
Confidence 1123345777765 4566777888888889999998766553 366766543
No 199
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=94.96 E-value=0.02 Score=56.30 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=60.9
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. ....+ ...+..++++.+|+|+.++
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~-----~~~~~---------~~~~l~ell~~aDvV~l~~ 208 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAYNPE-----FEPFL---------TYTDFDTVLKEADIVSLHT 208 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCGG-----GTTTC---------EECCHHHHHHHCSEEEECC
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCChhhh-----hhccc---------cccCHHHHHhcCCEEEEcC
Confidence 46899999999999999999999999997 677777643210 00011 1124567788999999887
Q ss_pred C-ChHhHHHHHHHHH---HcCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCV---VLGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~---~~~~p~i~~~ 192 (444)
- ++.++..++.... +.+.-+|+.+
T Consensus 209 Plt~~t~~li~~~~l~~mk~gailIN~a 236 (343)
T 2yq5_A 209 PLFPSTENMIGEKQLKEMKKSAYLINCA 236 (343)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred CCCHHHHHHhhHHHHhhCCCCcEEEECC
Confidence 6 4566766654432 3345577765
No 200
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=94.95 E-value=0.0063 Score=60.19 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=61.3
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|... ..... ....+. . .++..++++++|+|+.++
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~--~~~g~~--~------~~~l~ell~~aDiV~l~~ 223 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERA--RADGFA--V------AESKDALFEQSDVLSVHL 223 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHH--HHTTCE--E------CSSHHHHHHHCSEEEECC
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHH--HhcCce--E------eCCHHHHHhhCCEEEEec
Confidence 46899999999999999999999999997 677777542 10000 011111 0 134567788999999887
Q ss_pred C-ChHhHHHHHHHHH---HcCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCV---VLGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~---~~~~p~i~~~ 192 (444)
- ++.++..++.... +.+.-+|+.+
T Consensus 224 Plt~~t~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 224 RLNDETRSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred cCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 5 5567766665433 2344577765
No 201
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=94.95 E-value=0.037 Score=57.42 Aligned_cols=123 Identities=16% Similarity=0.246 Sum_probs=81.8
Q ss_pred HHhhhhccccCCCCCHHHH------------------HhhhcCcEEEECCCccHHHHHHHHHH----cCC------CcEE
Q 013384 70 MIYRYSRHLLLPSFGVEGQ------------------SNLLKSSILVIGAGGLGSPALLYLAA----CGV------GRLG 121 (444)
Q Consensus 70 ~~~ry~Rq~~l~~~g~~~q------------------~~L~~~~VlIvG~GglGs~ia~~La~----~Gv------g~i~ 121 (444)
-++||..++-. |..+-| ++|++.||++.|+|..|..+|+.|.. .|+ ++|.
T Consensus 281 il~ryr~~ipv--FnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~ 358 (605)
T 1o0s_A 281 LLDKYQDKYTM--FNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIY 358 (605)
T ss_dssp HHHHHTTTSEE--EEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEE
T ss_pred HHHHhccCCCe--eCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEE
Confidence 35788765544 754433 57899999999999999999999998 786 6999
Q ss_pred EeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccC--ChHhHHHHHHHHHHcCCcEEEEcccC
Q 013384 122 IVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATD--NAPSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 122 lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D--~~~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
++|..-+=..+-.-+++.-.--+.... ...+..+.++ +.|+.|.++- ..=+...|..++.....|+|++-+..
T Consensus 359 ~vD~~Gli~~~r~~l~~~k~~~A~~~~-~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 435 (605)
T 1o0s_A 359 LMDIDGLVTKNRKEMNPRHVQFAKDMP-ETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNP 435 (605)
T ss_dssp EEETTEECBTTCSSCCGGGTTTCBSSC-CCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred EEECCCceeCCCCCchHHHHHHHhhcC-CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 999876643321112221110000000 1124666776 5999998874 33456788888888889999875443
No 202
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.94 E-value=0.032 Score=54.39 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=50.8
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----cccc----ccCcceEEEEeecCCcccHHhhcCCCc
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMHR----INSTVHIIEHREALRTSNALEILSQYE 162 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~D 162 (444)
++..||.|+|+|.+|+.++..|+..|++++.|+|-+.-... +|.. ....+++.... + .+.++++|
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~------d-~~a~~~aD 75 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN------D-YKDLENSD 75 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES------C-GGGGTTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC------C-HHHHCCCC
Confidence 34578999999999999999999999889999997642111 2222 12234444321 1 34568999
Q ss_pred EEEEccCCh
Q 013384 163 IVVDATDNA 171 (444)
Q Consensus 163 vVi~~~D~~ 171 (444)
+||.+...+
T Consensus 76 vVIi~ag~p 84 (321)
T 3p7m_A 76 VVIVTAGVP 84 (321)
T ss_dssp EEEECCSCC
T ss_pred EEEEcCCcC
Confidence 999886543
No 203
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=94.92 E-value=0.05 Score=56.20 Aligned_cols=106 Identities=11% Similarity=0.151 Sum_probs=72.6
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHH----cCC------CcEEEeeCCccccccc-ccccCcceEEEEeec-CCcccHHh
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAA----CGV------GRLGIVDHDVVELNNM-HRINSTVHIIEHREA-LRTSNALE 156 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~----~Gv------g~i~lvD~D~V~~sNl-~Rlnp~~~v~~~~~~-~~~~~~~~ 156 (444)
++|++.||++.|+|..|..+|+.|.. .|+ ++|.++|..-+=..+- ..+++.-.--+.... ....+..+
T Consensus 280 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~e 359 (564)
T 1pj3_A 280 KPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFED 359 (564)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHH
T ss_pred CcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHH
Confidence 57899999999999999999999986 896 7899999976644332 112322110011100 10134667
Q ss_pred hcC--CCcEEEEccC--ChHhHHHHHHHHHHcCCcEEEEccc
Q 013384 157 ILS--QYEIVVDATD--NAPSRYMISDCCVVLGKPLVSGAAL 194 (444)
Q Consensus 157 ~~~--~~DvVi~~~D--~~~~r~~i~~~~~~~~~p~i~~~~~ 194 (444)
.++ +.|+.|.++- ..=+...|..++.....|+|++-+.
T Consensus 360 av~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 360 AVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp HHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred HHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 777 6999998874 3345677888888888999987544
No 204
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.92 E-value=0.019 Score=54.57 Aligned_cols=73 Identities=18% Similarity=0.227 Sum_probs=48.1
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH-
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP- 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~- 172 (444)
.+|.|||+|.+|+.++..|+..|. +++++| +.-....+... .+ .. ..+..+.+.++|+||.|+-...
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~--g~-------~~-~~~~~~~~~~~D~vi~~vp~~~~ 71 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IGPVADELLSL--GA-------VN-VETARQVTEFADIIFIMVPDTPQ 71 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTT--TC-------BC-CSSHHHHHHTCSEEEECCSSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHc--CC-------cc-cCCHHHHHhcCCEEEEECCCHHH
Confidence 479999999999999999999986 678887 43222111111 11 11 1334556678999999995554
Q ss_pred hHHHHH
Q 013384 173 SRYMIS 178 (444)
Q Consensus 173 ~r~~i~ 178 (444)
.+..+.
T Consensus 72 ~~~v~~ 77 (295)
T 1yb4_A 72 VEDVLF 77 (295)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 454443
No 205
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.91 E-value=0.014 Score=56.93 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=57.1
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--ccC---cceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--INS---TVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--lnp---~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
...+|.|||+|.+|+.++..|+++|. +++++|.+.-....+.. .++ .... ..... .+..+ +.++|+||.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r~~~~~~~l~~~g~~~~~~~~~~---~~~~~-~~~~~-~~~aDvVil 86 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE-EVILWARRKEIVDLINVSHTSPYVEESKI---TVRAT-NDLEE-IKKEDILVI 86 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHSCBTTBTTCCC---CSEEE-SCGGG-CCTTEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCCcccCCCCee---eEEEe-CCHHH-hcCCCEEEE
Confidence 35689999999999999999999995 78888875322222222 222 1111 00111 22334 678999999
Q ss_pred ccCChHhHHHHHHHHHHcCCcEEEEc
Q 013384 167 ATDNAPSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~~~~p~i~~~ 192 (444)
|+-+...+..+..... .+.++|+..
T Consensus 87 ~vk~~~~~~v~~~l~~-~~~~vv~~~ 111 (335)
T 1z82_A 87 AIPVQYIREHLLRLPV-KPSMVLNLS 111 (335)
T ss_dssp CSCGGGHHHHHTTCSS-CCSEEEECC
T ss_pred ECCHHHHHHHHHHhCc-CCCEEEEEe
Confidence 9987555555443322 445566654
No 206
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.031 Score=55.93 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=62.7
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCC-------cEEEeeCC--c-----cccccccccc----CcceEEEEeecCC-cccH
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVG-------RLGIVDHD--V-----VELNNMHRIN----STVHIIEHREALR-TSNA 154 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg-------~i~lvD~D--~-----V~~sNl~Rln----p~~~v~~~~~~~~-~~~~ 154 (444)
.||.|+|+|..|+.+|..|+..|-+ .++|.-.| . ++.-|-.|.| |.+++ +..+. ..+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~L---p~~i~~t~dl 111 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL---PDNLVANPDL 111 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCC---CSSEEEESCH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcC---CCCcEEeCCH
Confidence 3899999999999999999998742 36665433 2 2223333333 33332 11111 1345
Q ss_pred HhhcCCCcEEEEccCChHhHHHHHHHH--HHcCCcEEEE
Q 013384 155 LEILSQYEIVVDATDNAPSRYMISDCC--VVLGKPLVSG 191 (444)
Q Consensus 155 ~~~~~~~DvVi~~~D~~~~r~~i~~~~--~~~~~p~i~~ 191 (444)
.+.++++|+||-++-+...|..+.+.. ...+.++|++
T Consensus 112 ~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~ 150 (391)
T 4fgw_A 112 IDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISC 150 (391)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEEC
T ss_pred HHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEe
Confidence 677899999999999988888887764 2345677765
No 207
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.89 E-value=0.018 Score=57.43 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=52.7
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+.+++|+|+|+|++|..+++.+...|. ++.++|.+.-....+.. +...+.+.. ....+..+.+..+|+||+|+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~----~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRY----SSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEE----CCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEecc----CCHHHHHHHHcCCCEEEECC
Confidence 5889999999999999999999999998 89999875432211111 111111110 11234456677899999988
Q ss_pred CChH
Q 013384 169 DNAP 172 (444)
Q Consensus 169 D~~~ 172 (444)
-.+.
T Consensus 240 ~~p~ 243 (377)
T 2vhw_A 240 LVPG 243 (377)
T ss_dssp CCTT
T ss_pred CcCC
Confidence 6553
No 208
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.88 E-value=0.046 Score=52.63 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=62.0
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccc--cccccccCcceEEEEeecCCc-ccHHhhcC--CCcEE
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVEL--NNMHRINSTVHIIEHREALRT-SNALEILS--QYEIV 164 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~--sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvV 164 (444)
|++++|+|.|+ |++|+.+++.|+..|. ++.++|.+.-.. ..+..+.....++.+...+.. +...++++ +.|+|
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 35678999996 8899999999999995 777777643211 111112112235555555553 23344555 46999
Q ss_pred EEccCC---------hHh--------HHHHHHHHHHcC--CcEEEEcccCCcc
Q 013384 165 VDATDN---------APS--------RYMISDCCVVLG--KPLVSGAALGLEG 198 (444)
Q Consensus 165 i~~~D~---------~~~--------r~~i~~~~~~~~--~p~i~~~~~g~~G 198 (444)
|.+... +.. -..+.++|...+ ..+|+.+.....|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFG 132 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGC
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcC
Confidence 988542 111 123455666666 4677766544433
No 209
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=94.87 E-value=0.059 Score=31.96 Aligned_cols=29 Identities=28% Similarity=0.464 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013384 9 DVARVLGEIETLKAAKSDIDYRISALEAQ 37 (444)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (444)
++..+.+||+.|+.|++.++-+++.|++-
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkqg 31 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 77888899999999999998888888763
No 210
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.87 E-value=0.022 Score=54.90 Aligned_cols=74 Identities=14% Similarity=0.198 Sum_probs=48.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-H
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-P 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~ 172 (444)
.+|.|||+|.+|+.++..|+..|. ++.++|.+.-....+... .+. . . .+..+.+.++|+||.|+-++ .
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~--g~~--~-----~-~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQE--GAR--L-----G-RTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHT--TCE--E-----C-SCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHc--CCE--E-----c-CCHHHHHhcCCEEEEeCCCHHH
Confidence 579999999999999999999997 688888654322221111 111 1 1 23345567899999999854 3
Q ss_pred hHHHHH
Q 013384 173 SRYMIS 178 (444)
Q Consensus 173 ~r~~i~ 178 (444)
.+..+.
T Consensus 100 ~~~v~~ 105 (316)
T 2uyy_A 100 AKDLVL 105 (316)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 444443
No 211
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=94.87 E-value=0.017 Score=56.55 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=59.0
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. + ... +. ..+..++++.+|+|+.++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~----~~~-~~-------~~~l~ell~~aDvV~~~~ 206 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKG--I----EDY-CT-------QVSLDEVLEKSDIITIHA 206 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCS--C----TTT-CE-------ECCHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHH--H----Hhc-cc-------cCCHHHHHhhCCEEEEec
Confidence 46899999999999999999999999997 577777543211 1 011 11 124567778999999875
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
. +..++..+++.... .+.-+|+.+
T Consensus 207 p~t~~t~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 207 PYIKENGAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp CCCTTTCCSBCHHHHHTSCTTEEEEECS
T ss_pred CCchHHHHHhCHHHHhhCCCCcEEEECC
Confidence 4 45566666543322 233467765
No 212
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=94.85 E-value=0.2 Score=48.14 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=63.6
Q ss_pred cEEEEC-CCccHHHHHHHHHHc---CC--CcEEEeeCCcc--cccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEE
Q 013384 95 SILVIG-AGGLGSPALLYLAAC---GV--GRLGIVDHDVV--ELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVV 165 (444)
Q Consensus 95 ~VlIvG-~GglGs~ia~~La~~---Gv--g~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi 165 (444)
+|+|.| .|++|+.+++.|+.. |+ .++.++|...- ...++..+.....++.+...++. +...+++.++|+||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 81 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIV 81 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEEE
Confidence 699998 588999999999996 53 47888876431 11222222212345555556654 34456678999999
Q ss_pred EccCChH-----------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 166 DATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 166 ~~~D~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
.+..... .-..+.++|...++ .+|+.+.....|
T Consensus 82 h~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 82 HFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (337)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhC
Confidence 8864211 11245566777665 677766544333
No 213
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.83 E-value=0.064 Score=50.17 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=62.4
Q ss_pred hcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 92 LKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 92 ~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
+.++|+|.| .|++|+.+++.|+..|. ++.++|.+..... ...++.+...++. +....++++.|+||.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA-------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 456899999 67799999999999985 6777776543321 2345566666654 445677889999998742
Q ss_pred -----ChH--------hHHHHHHHHHHcCC-cEEEEccc
Q 013384 170 -----NAP--------SRYMISDCCVVLGK-PLVSGAAL 194 (444)
Q Consensus 170 -----~~~--------~r~~i~~~~~~~~~-p~i~~~~~ 194 (444)
.+. .-..+.++|++.+. .+|+.+..
T Consensus 74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~ 112 (267)
T 3rft_A 74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSN 112 (267)
T ss_dssp CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcch
Confidence 211 11345566766664 56666543
No 214
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.81 E-value=0.023 Score=55.12 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=56.5
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeC--Cccccccccc--ccCcceEEEEeecCC-cccHHhhcCCCcEEEEccC
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDH--DVVELNNMHR--INSTVHIIEHREALR-TSNALEILSQYEIVVDATD 169 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~--D~V~~sNl~R--lnp~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~D 169 (444)
+|.|||+|.+|+.++..|+..|. +++++|. +.-....+.. .++...+........ .++..+.+.++|+||.|+-
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 69999999999999999999995 7889887 4321111211 111100000000111 1134455689999999998
Q ss_pred ChHhHHHHHHHHH-HcCCcEEEE
Q 013384 170 NAPSRYMISDCCV-VLGKPLVSG 191 (444)
Q Consensus 170 ~~~~r~~i~~~~~-~~~~p~i~~ 191 (444)
.......+..... ..+..+|+.
T Consensus 81 ~~~~~~v~~~i~~l~~~~~vv~~ 103 (335)
T 1txg_A 81 TDGVLPVMSRILPYLKDQYIVLI 103 (335)
T ss_dssp GGGHHHHHHHHTTTCCSCEEEEC
T ss_pred hHHHHHHHHHHhcCCCCCEEEEE
Confidence 8766665555432 123445553
No 215
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.79 E-value=0.036 Score=53.48 Aligned_cols=72 Identities=28% Similarity=0.345 Sum_probs=48.0
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCc--cc--cccccc---ccCcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDV--VE--LNNMHR---INSTVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~--V~--~sNl~R---lnp~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
..+|+|||+|.+|+.++..|+..|. ++++++|.+. ++ .-++.. +.+...+.... + .+.+.++|+|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~-~~~~~~aD~V 79 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD------D-PEICRDADMV 79 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES------C-GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCC------C-HHHhCCCCEE
Confidence 4589999999999999999999985 5899999875 22 111212 22223332210 1 2345789999
Q ss_pred EEccCCh
Q 013384 165 VDATDNA 171 (444)
Q Consensus 165 i~~~D~~ 171 (444)
|.|+..+
T Consensus 80 ii~v~~~ 86 (319)
T 1lld_A 80 VITAGPR 86 (319)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9998543
No 216
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.74 E-value=0.085 Score=50.01 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=60.1
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc------c-cCcceEEEEeecCCc-ccHHhhcCCCcE
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR------I-NSTVHIIEHREALRT-SNALEILSQYEI 163 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R------l-np~~~v~~~~~~~~~-~~~~~~~~~~Dv 163 (444)
.++|+|.|+ |.+|+.+++.|+..| .++.+++.+.-...+-.+ + .+. ++.+...+++ +.....++++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~d~ 80 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVKNVDV 80 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHHTCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCC--CEEEEeccCCHHHHHHHHcCCCE
Confidence 367999996 889999999999999 467777665321101111 1 223 3444445543 445667789999
Q ss_pred EEEccCCh--HhHHHHHHHHHHcC-CcEE
Q 013384 164 VVDATDNA--PSRYMISDCCVVLG-KPLV 189 (444)
Q Consensus 164 Vi~~~D~~--~~r~~i~~~~~~~~-~p~i 189 (444)
||.+.... .....+-++|.+.+ ++.+
T Consensus 81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 109 (308)
T 1qyc_A 81 VISTVGSLQIESQVNIIKAIKEVGTVKRF 109 (308)
T ss_dssp EEECCCGGGSGGGHHHHHHHHHHCCCSEE
T ss_pred EEECCcchhhhhHHHHHHHHHhcCCCceE
Confidence 99988653 23345666777776 5533
No 217
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=94.72 E-value=0.018 Score=57.14 Aligned_cols=94 Identities=23% Similarity=0.219 Sum_probs=61.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|..++..+|.......-.. ...+.. . .+..++++.+|+|+.++-
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~----~~g~~~----~--~~l~ell~~aDvV~l~~P 230 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE----KVGARR----V--ENIEELVAQADIVTVNAP 230 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH----HTTEEE----C--SSHHHHHHTCSEEEECCC
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH----hcCcEe----c--CCHHHHHhcCCEEEECCC
Confidence 689999999999999999999999998755888875432111000 001111 1 245677889999998875
Q ss_pred C-hHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 170 N-APSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 170 ~-~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
. +.++..+++.... .+.-+|+.+.
T Consensus 231 ~t~~t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 231 LHAGTKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 4 4566666544322 2334777654
No 218
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=94.72 E-value=0.12 Score=49.69 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=62.4
Q ss_pred cEEEECC-CccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-c-cHHhhcCCCcEEEEccCC
Q 013384 95 SILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-S-NALEILSQYEIVVDATDN 170 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~-~~~~~~~~~DvVi~~~D~ 170 (444)
+|+|.|+ |.+|+.+++.|+.. |. ++.++|.+.- .+..+...-.++.+...+.. . ...+.++++|+||.+...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~ 77 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSD---AISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCG---GGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcc---hHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccc
Confidence 6999996 77999999999998 64 6777776432 22221112245555566654 2 245567789999987432
Q ss_pred --h-------H--------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 171 --A-------P--------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 171 --~-------~--------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+ . .-..+-++|.+.+..+|+.+..+..|
T Consensus 78 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g 122 (345)
T 2bll_A 78 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 122 (345)
T ss_dssp CCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred cCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcC
Confidence 1 1 11234556666667788877654444
No 219
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.71 E-value=0.087 Score=50.38 Aligned_cols=94 Identities=10% Similarity=0.068 Sum_probs=59.0
Q ss_pred CcEEEEC-CCccHHHHHHHHHHc-CCCcEEEeeCCcc--cccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 94 SSILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVV--ELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 94 ~~VlIvG-~GglGs~ia~~La~~-Gvg~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
-||+|+| +|.+|..+++.+... ++.=..++|...- .-.++..+. .+......+. .+..+++.++|+|||++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~---G~~~~gv~v~-~dl~~ll~~aDVvIDFT- 96 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILI---GSDFLGVRIT-DDPESAFSNTEGILDFS- 96 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGT---TCSCCSCBCB-SCHHHHTTSCSEEEECS-
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhh---ccCcCCceee-CCHHHHhcCCCEEEEcC-
Confidence 4899999 888999999998743 4444555565321 111111110 0000011112 35567778999999999
Q ss_pred ChHhHHHHHHHHHHcCCcEEEEc
Q 013384 170 NAPSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~i~~~ 192 (444)
.+..-+..-..|.++++|+|.+.
T Consensus 97 ~p~a~~~~~~~~l~~Gv~vViGT 119 (288)
T 3ijp_A 97 QPQASVLYANYAAQKSLIHIIGT 119 (288)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 45555667778999999999654
No 220
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.70 E-value=0.013 Score=53.03 Aligned_cols=90 Identities=17% Similarity=0.109 Sum_probs=55.1
Q ss_pred cEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCc---ceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 95 SILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INST---VHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 95 ~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~---~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+|+|+| +|.+|+.++..|+..|. ++.++|.+.-....+.. +... ..+. ..+..+.++++|+||.|+-
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAAEYRRIAGDASIT-------GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHHHHHHHHSSCCEE-------EEEHHHHHHHCSEEEECSC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccccccCCCC-------hhhHHHHHhcCCEEEEeCC
Confidence 699999 99999999999999996 78888865322111111 1100 0111 1233455678999999998
Q ss_pred ChHhHHHHHHHHH-HcCCcEEEEc
Q 013384 170 NAPSRYMISDCCV-VLGKPLVSGA 192 (444)
Q Consensus 170 ~~~~r~~i~~~~~-~~~~p~i~~~ 192 (444)
....+..+.+... ..+..+++.+
T Consensus 74 ~~~~~~~~~~l~~~~~~~~vi~~~ 97 (212)
T 1jay_A 74 WEHAIDTARDLKNILREKIVVSPL 97 (212)
T ss_dssp HHHHHHHHHHTHHHHTTSEEEECC
T ss_pred hhhHHHHHHHHHHHcCCCEEEEcC
Confidence 6655554444321 1255566543
No 221
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.70 E-value=0.038 Score=54.07 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=47.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc--ccc--cccccc----cCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV--VEL--NNMHRI----NSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~--V~~--sNl~Rl----np~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.||.|+|+|.+|+.+|..|+..|...+.|+|-|. ++. .++.+. ....++... .+..+.++++|+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t------~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE------YSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE------CSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe------CCHHHHhCCCCEEE
Confidence 4799999999999999999999985599999874 221 222221 112222221 22333578999999
Q ss_pred EccCC
Q 013384 166 DATDN 170 (444)
Q Consensus 166 ~~~D~ 170 (444)
.+...
T Consensus 84 ~a~g~ 88 (331)
T 1pzg_A 84 VTAGL 88 (331)
T ss_dssp ECCSC
T ss_pred EccCC
Confidence 98743
No 222
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.70 E-value=0.081 Score=51.24 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=56.3
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCC-cEEEeeCCcccccccccccCcceEEEEeecCCcccHHh-hcCCCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALE-ILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg-~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~-~~~~~DvVi~~~D~~ 171 (444)
.+|.|||+|.+|..+++.|...|.. ++.++|.+.-....+... .+.... ..+..+ .+.++|+||.|+-..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~--G~~~~~------~~~~~~~~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--GIIDEG------TTSIAKVEDFSPDFVMLSSPVR 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--TSCSEE------ESCTTGGGGGCCSEEEECSCGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC--CCcchh------cCCHHHHhhccCCEEEEeCCHH
Confidence 6899999999999999999999974 888988764221111101 010000 122334 568899999998766
Q ss_pred HhHHHHHHHHHH--cCCcEEEE
Q 013384 172 PSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 172 ~~r~~i~~~~~~--~~~p~i~~ 191 (444)
.....+.+.... .+..+++.
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHhhccCCCcEEEEC
Confidence 655555555432 23445543
No 223
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.69 E-value=0.06 Score=51.52 Aligned_cols=89 Identities=10% Similarity=0.181 Sum_probs=57.0
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA- 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~- 171 (444)
..+|.|||+|.+|..++..|+..|. +++++|.+.-....+... .+. . ..+..+.++ +|+||.|+-++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~~-------~-~~~~~~~~~-aDvvi~~vp~~~ 82 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA--GAT-------L-ADSVADVAA-ADLIHITVLDDA 82 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT--TCE-------E-CSSHHHHTT-SSEEEECCSSHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC--CCE-------E-cCCHHHHHh-CCEEEEECCChH
Confidence 3589999999999999999999996 788888654322222111 111 0 134556677 99999998765
Q ss_pred HhHHHHHHHHH--HcCCcEEEEcc
Q 013384 172 PSRYMISDCCV--VLGKPLVSGAA 193 (444)
Q Consensus 172 ~~r~~i~~~~~--~~~~p~i~~~~ 193 (444)
..+..+..... ..+..+|+.++
T Consensus 83 ~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 83 QVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCC
Confidence 45555544432 23445665543
No 224
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=94.67 E-value=0.18 Score=48.58 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=65.1
Q ss_pred CcEEEEC-CCccHHHHHHHHHHcCCC-cEEEeeCCcc--cccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEcc
Q 013384 94 SSILVIG-AGGLGSPALLYLAACGVG-RLGIVDHDVV--ELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDAT 168 (444)
Q Consensus 94 ~~VlIvG-~GglGs~ia~~La~~Gvg-~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~ 168 (444)
++|+|.| .|.+|+.+++.|+..|-| ++.++|...- ...++..+. ...++.+...++. +...++++++|+||.+.
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 5799999 577999999999998432 6777776431 112222221 1245555556654 34556788899999886
Q ss_pred CChH-----------------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 169 DNAP-----------------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 169 D~~~-----------------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
.... .-..+-++|...+..+|+.+.....|
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg 130 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYG 130 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGC
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeC
Confidence 4321 01244566777677888877655444
No 225
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.67 E-value=0.062 Score=50.39 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=61.4
Q ss_pred CcEEEECC-CccHHHHHHHHHHc--CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 94 SSILVIGA-GGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~--Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
++|+|.|+ |.+|+.+++.|+.. | -++.+++.+.-....+ ..+. ++.+...+++ +...+.++++|+||.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~l--~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVEKASTL--ADQG--VEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTTHHH--HHTT--CEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCHHHHhHH--hhcC--CeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 47999996 88999999999988 7 4677777643211111 1122 3344445553 445667889999998865
Q ss_pred C-------hHhHHHHHHHHHHcCC-cEEEEcccC
Q 013384 170 N-------APSRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 170 ~-------~~~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
. ...-..+-++|.+.++ .+|+.+..+
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 2 2233455667777775 567665443
No 226
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.67 E-value=0.025 Score=58.89 Aligned_cols=47 Identities=13% Similarity=0.174 Sum_probs=40.6
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEE
Q 013384 229 DSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIV 276 (444)
Q Consensus 229 ~~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~~~~~~~~ 276 (444)
..+.+.|+++++|+++|+|+||++++...|+.| .+.||+.......+
T Consensus 483 ~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~n-~~~fDg~~~~~~~~ 529 (531)
T 1tt5_A 483 GAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNN-TYIYSGMSQTSATF 529 (531)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCCS-CEEEETTTTEEEEC
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHHcCCCccccc-eEEEecCCceeEEE
Confidence 356799999999999999999999999999854 89999998876544
No 227
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.66 E-value=0.065 Score=50.50 Aligned_cols=87 Identities=13% Similarity=-0.054 Sum_probs=54.8
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHhH
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSR 174 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r 174 (444)
+|.|||+|.+|+.++..|+..|. ++.++|.+.-....+.+.. +.... ..+..+. .++|+||.|+-....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g--~~~~~------~~~~~~~-~~~D~vi~av~~~~~~ 71 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQ--LVDEA------GQDLSLL-QTAKIIFLCTPIQLIL 71 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT--SCSEE------ESCGGGG-TTCSEEEECSCHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCC--CCccc------cCCHHHh-CCCCEEEEECCHHHHH
Confidence 69999999999999999999997 7888886542222221111 10001 1123345 7899999999876666
Q ss_pred HHHHHHHHH--cCCcEEEE
Q 013384 175 YMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 175 ~~i~~~~~~--~~~p~i~~ 191 (444)
..+.+.... .+..+++.
T Consensus 72 ~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp HHHHHHGGGSCTTCEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEC
Confidence 666555322 24445554
No 228
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.66 E-value=0.029 Score=54.85 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=59.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEE----EeecC--CcccHHhhcCCCcEEEEc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIE----HREAL--RTSNALEILSQYEIVVDA 167 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~----~~~~~--~~~~~~~~~~~~DvVi~~ 167 (444)
.+|+|||+|.+|+.++..|+..|. +++++|.+.-....+.... ...+.. ....+ ...+..+.+.++|+||.|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRG-AIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHT-SEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcC-CeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 589999999999999999999996 6889887532211111110 011000 00111 112344556889999999
Q ss_pred cCChHhHHHHHHHHH--HcCCcEEEE
Q 013384 168 TDNAPSRYMISDCCV--VLGKPLVSG 191 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~--~~~~p~i~~ 191 (444)
+-....+..+..... ..+..+|+.
T Consensus 83 v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 83 VPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred CCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 988777666655532 235556665
No 229
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=94.65 E-value=0.027 Score=55.15 Aligned_cols=88 Identities=14% Similarity=0.104 Sum_probs=59.5
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++.++|.+.-... .+ .. ..+..++++++|+|+.++-
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~~~~~~-------g~--~~------~~~l~ell~~aDvVil~vP 224 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRSKKPNT-------NY--TY------YGSVVELASNSDILVVACP 224 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCCTTC-------CS--EE------ESCHHHHHHTCSEEEECSC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCchhcc-------Cc--ee------cCCHHHHHhcCCEEEEecC
Confidence 6889999999999999999999999887 6778775432110 11 11 1245677889999998876
Q ss_pred C-hHhHHHHHH-HH--HHcCCcEEEEcc
Q 013384 170 N-APSRYMISD-CC--VVLGKPLVSGAA 193 (444)
Q Consensus 170 ~-~~~r~~i~~-~~--~~~~~p~i~~~~ 193 (444)
. ..++..+++ .. .+.+.-+|+.+.
T Consensus 225 ~~~~t~~li~~~~l~~mk~gailIn~sr 252 (333)
T 3ba1_A 225 LTPETTHIINREVIDALGPKGVLINIGR 252 (333)
T ss_dssp CCGGGTTCBCHHHHHHHCTTCEEEECSC
T ss_pred CChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 4 456655532 21 234556777653
No 230
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.65 E-value=0.042 Score=54.37 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=57.8
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc----------------ccCcceEEEEeecCCcc--
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR----------------INSTVHIIEHREALRTS-- 152 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R----------------lnp~~~v~~~~~~~~~~-- 152 (444)
++..+|.|||+|.+|..++.+|+..|. ++.++|.+.-....+.. -.|++-+...+.....+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 456789999999999999999999995 78888876422111111 01133222222221111
Q ss_pred -cHHhhcCCCcEEEEccCCh-HhHHHHHHHHHHcCCcEEEEcccC
Q 013384 153 -NALEILSQYEIVVDATDNA-PSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 153 -~~~~~~~~~DvVi~~~D~~-~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
.....++.-++|||++-.. ..-..+.+.+...++.++++.+.|
T Consensus 99 ~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 99 QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 1122234456777765433 333445555666677777665433
No 231
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.61 E-value=0.02 Score=56.77 Aligned_cols=77 Identities=16% Similarity=0.305 Sum_probs=51.4
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.++.++|+|+|+|++|..+++.|...|. +++++|.+.-....+.. +.. .+... ....++..+.+..+|+||+|+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~--~~~~~--~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG--RVITL--TATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SEEEE--ECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc--eEEEe--cCCHHHHHHHHhCCCEEEECC
Confidence 5888999999999999999999999998 89999875422111111 111 11111 112234556678899999998
Q ss_pred CCh
Q 013384 169 DNA 171 (444)
Q Consensus 169 D~~ 171 (444)
..+
T Consensus 238 g~~ 240 (369)
T 2eez_A 238 LVP 240 (369)
T ss_dssp C--
T ss_pred CCC
Confidence 755
No 232
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=94.59 E-value=0.037 Score=54.19 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=59.7
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. .. .. +. ..+..++++.+|+|+.++
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~----~~-~~-------~~~l~ell~~aDvV~~~~ 205 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG--DH----PD-FD-------YVSLEDLFKQSDVIDLHV 205 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS--CC----TT-CE-------ECCHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCcchh--hH----hc-cc-------cCCHHHHHhcCCEEEEcC
Confidence 36899999999999999999999999996 577777643211 10 11 11 124567788999999887
Q ss_pred C-ChHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 169 D-NAPSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 169 D-~~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
- +..++..+++... +.+.-+|+.+.
T Consensus 206 P~~~~t~~li~~~~l~~mk~ga~lIn~sr 234 (333)
T 1dxy_A 206 PGIEQNTHIINEAAFNLMKPGAIVINTAR 234 (333)
T ss_dssp CCCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred CCchhHHHHhCHHHHhhCCCCcEEEECCC
Confidence 5 4456666654322 23444677654
No 233
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=94.58 E-value=0.043 Score=50.87 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=31.3
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
|++++|+|.| .||+|.++++.|+..|..++.++|.+.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence 5678899998 577999999999999987688887653
No 234
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.58 E-value=0.029 Score=53.33 Aligned_cols=73 Identities=14% Similarity=0.265 Sum_probs=47.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-H
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA-P 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~-~ 172 (444)
.+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .+. . ..+..+.++++|+||.|+-+. .
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~~-------~-~~~~~~~~~~advvi~~v~~~~~ 70 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVAL--GAR-------Q-ASSPAEVCAACDITIAMLADPAA 70 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHH--TCE-------E-CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC--CCe-------e-cCCHHHHHHcCCEEEEEcCCHHH
Confidence 479999999999999999999995 688888654322211111 110 0 123455566788888888765 4
Q ss_pred hHHHH
Q 013384 173 SRYMI 177 (444)
Q Consensus 173 ~r~~i 177 (444)
.+..+
T Consensus 71 ~~~v~ 75 (287)
T 3pdu_A 71 AREVC 75 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 235
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.57 E-value=0.054 Score=51.47 Aligned_cols=94 Identities=16% Similarity=0.241 Sum_probs=58.5
Q ss_pred cCcEEEECC-CccHHHHHHHHHHc-CCCcEEEeeCCccc--cccccccc--CcceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 93 KSSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVE--LNNMHRIN--STVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~V~--~sNl~Rln--p~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
.-||+|+|+ |.+|..+++.+... |+.-..++|.+.-. ..++..+. +...+..+ ++..+++.++|+|||
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~------~dl~~~l~~~DvVID 78 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ------SSLDAVKDDFDVFID 78 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE------SCSTTTTTSCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceec------CCHHHHhcCCCEEEE
Confidence 358999999 88999999988753 43323366654211 11222110 00111111 223455568999999
Q ss_pred ccCChHhHHHHHHHHHHcCCcEEEEcc
Q 013384 167 ATDNAPSRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~~~~p~i~~~~ 193 (444)
++ .+..-..+-..|.++|+|+|.+.+
T Consensus 79 ft-~p~~~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 79 FT-RPEGTLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp CS-CHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cC-ChHHHHHHHHHHHhCCCCEEEECC
Confidence 99 566667788899999999887544
No 236
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.57 E-value=0.25 Score=46.28 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=61.7
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCCh-
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDNA- 171 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~~- 171 (444)
+|+|.|+ |.+|+.+++.|...+-.++.+++.+.-....+ ..+. ++.+...+++ +.....++++|+||.+....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~--~~~~--v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 77 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD--WRGK--VSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH 77 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG--GBTT--BEEEECCTTCHHHHHHHTTTCSEEEECCCCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh--hhCC--CEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence 6999995 77999999999988335777776554322221 1223 4444555553 44567789999999887542
Q ss_pred ------HhHHHHHHHHHHcCC-cEEEEccc
Q 013384 172 ------PSRYMISDCCVVLGK-PLVSGAAL 194 (444)
Q Consensus 172 ------~~r~~i~~~~~~~~~-p~i~~~~~ 194 (444)
..-..+-++|.+.++ .+|+.+..
T Consensus 78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 222355667777775 47766653
No 237
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.56 E-value=0.15 Score=50.28 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=62.0
Q ss_pred hcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 92 LKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 92 ~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
+.++|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-....+ ..+. ++.+...+.. +...++++++|+||.+..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~--v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTE--DMFC--DEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCG--GGTC--SEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhh--ccCC--ceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 3568999997 7799999999999995 777777653221110 1122 3344445553 345667789999998854
Q ss_pred Ch----------Hh--------HHHHHHHHHHcCC-cEEEEcccCC
Q 013384 170 NA----------PS--------RYMISDCCVVLGK-PLVSGAALGL 196 (444)
Q Consensus 170 ~~----------~~--------r~~i~~~~~~~~~-p~i~~~~~g~ 196 (444)
.. .. -..+.++|.+.++ .+|+.+..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v 148 (379)
T 2c5a_A 103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACI 148 (379)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred ecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehhe
Confidence 21 11 1245566766665 5776665433
No 238
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.54 E-value=0.032 Score=53.55 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=48.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh-
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA- 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~- 171 (444)
..+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .... . ..+..+.++++|+||.|+-+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~~~--~-----~~~~~e~~~~aDvvi~~vp~~~ 76 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE--GACG--A-----AASAREFAGVVDALVILVVNAA 76 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT--TCSE--E-----ESSSTTTTTTCSEEEECCSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc--CCcc--c-----cCCHHHHHhcCCEEEEECCCHH
Confidence 4579999999999999999999996 788888654221111111 1110 0 123345567889999888775
Q ss_pred HhHHHH
Q 013384 172 PSRYMI 177 (444)
Q Consensus 172 ~~r~~i 177 (444)
..+..+
T Consensus 77 ~~~~v~ 82 (303)
T 3g0o_A 77 QVRQVL 82 (303)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344333
No 239
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.52 E-value=0.035 Score=54.41 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=59.1
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
..|+..+|.|||+|.+|..++..|...|+ ++.++|.+.-. ...+ ....+. .. +..+.++++|+||.|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~~--~~~~a~~~G~~--~~-------~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSA--TVAKAEAHGLK--VA-------DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTCH--HHHHHHHTTCE--EE-------CHHHHHHTCSEEEEC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEECChHH--HHHHHHHCCCE--Ec-------cHHHHHhcCCEEEEe
Confidence 45788899999999999999999999997 67777764311 0111 011121 11 234566789999999
Q ss_pred cCChHhHHHHH-HHHH--HcCCcEEEE
Q 013384 168 TDNAPSRYMIS-DCCV--VLGKPLVSG 191 (444)
Q Consensus 168 ~D~~~~r~~i~-~~~~--~~~~p~i~~ 191 (444)
+-....+..+. +... +.+..++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~ 106 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFA 106 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEES
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEc
Confidence 98776666665 4432 224455654
No 240
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.52 E-value=0.085 Score=50.45 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=59.3
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccc-cccccc-cCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVEL-NNMHRI-NSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~-sNl~Rl-np~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
++|+|.|+ |.+|+.+++.|...|. ++.+++.+.-.. ..+..+ .+.+ +.+...+++ +.....++++|+||.+..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~~~v--~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQSLGA--IIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHHTTC--EEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhcCCC--EEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 57999995 8899999999999994 677777654211 111111 2233 344445543 455677889999999876
Q ss_pred Ch--HhHHHHHHHHHHcC-CcEE
Q 013384 170 NA--PSRYMISDCCVVLG-KPLV 189 (444)
Q Consensus 170 ~~--~~r~~i~~~~~~~~-~p~i 189 (444)
.. ..-..+-++|.+.+ ++.+
T Consensus 89 ~~~~~~~~~l~~aa~~~g~v~~~ 111 (318)
T 2r6j_A 89 FPQILDQFKILEAIKVAGNIKRF 111 (318)
T ss_dssp GGGSTTHHHHHHHHHHHCCCCEE
T ss_pred hhhhHHHHHHHHHHHhcCCCCEE
Confidence 43 22345556777776 5433
No 241
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.49 E-value=0.054 Score=51.56 Aligned_cols=88 Identities=19% Similarity=0.274 Sum_probs=55.2
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH-
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP- 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~- 172 (444)
.+|.|||+|.+|+.++..|+..|. ++.++|.+.-....+... .+. . ..+..+.+.++|+||.|+-++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~--g~~--~------~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA--GAE--T------ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT--TCE--E------CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--CCe--e------cCCHHHHHhCCCEEEEECCCHHH
Confidence 379999999999999999999996 688888653221111111 111 1 1234455678999999997553
Q ss_pred hHHHH---HHHH--HHcCCcEEEEc
Q 013384 173 SRYMI---SDCC--VVLGKPLVSGA 192 (444)
Q Consensus 173 ~r~~i---~~~~--~~~~~p~i~~~ 192 (444)
.+..+ .... ...+..+|+.+
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHhCcchHhhcCCCCCEEEECC
Confidence 45444 2222 23455666654
No 242
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.49 E-value=0.042 Score=52.90 Aligned_cols=92 Identities=14% Similarity=0.145 Sum_probs=57.2
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
++..+|.|||+|.+|..++.+|+..|. +++++|.+.-....+... .+. ...+..+.++++|+||.|+-+
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~--g~~--------~~~~~~e~~~~aDvVi~~vp~ 75 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAA--GAH--------LCESVKAALSASPATIFVLLD 75 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHH--TCE--------ECSSHHHHHHHSSEEEECCSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC--CCe--------ecCCHHHHHhcCCEEEEEeCC
Confidence 345789999999999999999999997 688887654222111111 110 013445666778999988876
Q ss_pred hH-hHHHHH--HH-HHHcCCcEEEEcc
Q 013384 171 AP-SRYMIS--DC-CVVLGKPLVSGAA 193 (444)
Q Consensus 171 ~~-~r~~i~--~~-~~~~~~p~i~~~~ 193 (444)
.. .+..+. .. ....+..+|+.++
T Consensus 76 ~~~~~~v~~~~~l~~~~~g~ivid~st 102 (306)
T 3l6d_A 76 NHATHEVLGMPGVARALAHRTIVDYTT 102 (306)
T ss_dssp HHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred HHHHHHHhcccchhhccCCCEEEECCC
Confidence 64 454443 11 1234555666554
No 243
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.47 E-value=0.061 Score=55.35 Aligned_cols=38 Identities=21% Similarity=0.359 Sum_probs=30.2
Q ss_pred HHhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 88 QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 88 q~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
...+..++|.|||+|..|+.+|.+|+..|. ++.++|.+
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~ 47 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRS 47 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 346778899999999999999999999997 68888865
No 244
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.47 E-value=0.15 Score=48.73 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=59.5
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccc---c---ccccc-cCcceEEEEeecCCc-ccHHhhcCCCcE
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVEL---N---NMHRI-NSTVHIIEHREALRT-SNALEILSQYEI 163 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~---s---Nl~Rl-np~~~v~~~~~~~~~-~~~~~~~~~~Dv 163 (444)
.++|+|.|+ |.+|+.+++.|+..| -++.+++.+.-+. . .+..+ .+. ++.+...+++ +.....++++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~--v~~v~~D~~d~~~l~~a~~~~d~ 80 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRSMG--VTIIEGEMEEHEKMVSVLKQVDI 80 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhcCC--cEEEEecCCCHHHHHHHHcCCCE
Confidence 357999995 889999999999999 4778877653100 0 01001 223 3344445543 445677889999
Q ss_pred EEEccCCh--HhHHHHHHHHHHcC-CcE
Q 013384 164 VVDATDNA--PSRYMISDCCVVLG-KPL 188 (444)
Q Consensus 164 Vi~~~D~~--~~r~~i~~~~~~~~-~p~ 188 (444)
||.+.... ..-..+-++|.+.+ ++.
T Consensus 81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (321)
T 3c1o_A 81 VISALPFPMISSQIHIINAIKAAGNIKR 108 (321)
T ss_dssp EEECCCGGGSGGGHHHHHHHHHHCCCCE
T ss_pred EEECCCccchhhHHHHHHHHHHhCCccE
Confidence 99987643 23345566777776 543
No 245
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.44 E-value=0.022 Score=58.74 Aligned_cols=71 Identities=20% Similarity=0.264 Sum_probs=50.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.+.+++|+|+|+|.+|..+++.|...|. ++.++|.+.....-.... ...+ .+..+.+..+|+||+|+.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~--Ga~~---------~~l~e~l~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMME--GFDV---------VTVEEAIGDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT--TCEE---------CCHHHHGGGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc--CCEE---------ecHHHHHhCCCEEEECCC
Confidence 4678999999999999999999999997 888988765321110001 1111 123355788999999987
Q ss_pred ChH
Q 013384 170 NAP 172 (444)
Q Consensus 170 ~~~ 172 (444)
+..
T Consensus 339 t~~ 341 (494)
T 3ce6_A 339 NKD 341 (494)
T ss_dssp SSC
T ss_pred CHH
Confidence 654
No 246
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=94.42 E-value=0.045 Score=53.06 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=58.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. . +...+..++++.+|+|+.++-
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~----------~-------~~~~~l~ell~~aDvV~l~~p 202 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTPKPL----------P-------YPFLSLEELLKEADVVSLHTP 202 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS----------S-------SCBCCHHHHHHHCSEEEECCC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCCccc----------c-------cccCCHHHHHhhCCEEEEeCC
Confidence 6899999999999999999999999996 677777543211 0 122345677889999998875
Q ss_pred Ch-HhHHHHHHHHH---HcCCcEEEEcc
Q 013384 170 NA-PSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 170 ~~-~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
.. .++..+++... +.+.-+|+.+.
T Consensus 203 ~~~~t~~li~~~~l~~mk~ga~lin~sr 230 (311)
T 2cuk_A 203 LTPETHRLLNRERLFAMKRGAILLNTAR 230 (311)
T ss_dssp CCTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred CChHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 43 45555542221 23444777654
No 247
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=94.41 E-value=0.12 Score=51.71 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=67.0
Q ss_pred HhhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc----ccC--cceEEEEeecCCcccH-Hhhc--
Q 013384 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR----INS--TVHIIEHREALRTSNA-LEIL-- 158 (444)
Q Consensus 89 ~~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R----lnp--~~~v~~~~~~~~~~~~-~~~~-- 158 (444)
..+++++|+|.|+ |++|+++++.|+..|..++.++|...-....+.+ ..+ ...++.+...++.... ..++
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~ 110 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKAD 110 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHC
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHh
Confidence 4578899999995 6699999999999998899998864322211111 111 2466777766765432 2233
Q ss_pred CCCcEEEEccCC--------hH-----------hHHHHHHHHHHcCC-cEEEEcc
Q 013384 159 SQYEIVVDATDN--------AP-----------SRYMISDCCVVLGK-PLVSGAA 193 (444)
Q Consensus 159 ~~~DvVi~~~D~--------~~-----------~r~~i~~~~~~~~~-p~i~~~~ 193 (444)
.++|+||.+... +. .-..+.++|...+. .+|..++
T Consensus 111 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS 165 (399)
T 3nzo_A 111 GQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVST 165 (399)
T ss_dssp CCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 589999987642 10 01245667777775 4666554
No 248
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.37 E-value=0.11 Score=49.34 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=60.0
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc--cccccc---c-cCcceEEEEeecCCc-ccHHhhcCCCcEE
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHR---I-NSTVHIIEHREALRT-SNALEILSQYEIV 164 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~R---l-np~~~v~~~~~~~~~-~~~~~~~~~~DvV 164 (444)
.++|+|.|+ |.+|+.+++.|...| .++.+++.+.-. +..... + .+. ++.+...++. +.....++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~l~~~~~~~d~v 80 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALKQVDVV 80 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCC--eEEEeCCCCCHHHHHHHHhCCCEE
Confidence 367999995 889999999999999 467777765321 111100 1 223 3444445543 4456778899999
Q ss_pred EEccCC------hHhHHHHHHHHHHcC-CcE
Q 013384 165 VDATDN------APSRYMISDCCVVLG-KPL 188 (444)
Q Consensus 165 i~~~D~------~~~r~~i~~~~~~~~-~p~ 188 (444)
|.+... ...-..+-++|.+.+ +..
T Consensus 81 i~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~ 111 (313)
T 1qyd_A 81 ISALAGGVLSHHILEQLKLVEAIKEAGNIKR 111 (313)
T ss_dssp EECCCCSSSSTTTTTHHHHHHHHHHSCCCSE
T ss_pred EECCccccchhhHHHHHHHHHHHHhcCCCce
Confidence 988753 233445667788776 543
No 249
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.35 E-value=0.054 Score=50.58 Aligned_cols=37 Identities=30% Similarity=0.293 Sum_probs=31.3
Q ss_pred hhhcCcEEEECC-C-ccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-G-GLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-G-glGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.|+ | |+|..+++.|+..|. ++.++|.+.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~ 57 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHE 57 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCH
Confidence 467889999998 7 899999999999996 477777653
No 250
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.32 E-value=0.044 Score=54.28 Aligned_cols=84 Identities=10% Similarity=0.138 Sum_probs=52.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCC------CcEEEeeCCcc-----ccccccc--cc----CcceEEEEeecCC-cccHH
Q 013384 94 SSILVIGAGGLGSPALLYLAACGV------GRLGIVDHDVV-----ELNNMHR--IN----STVHIIEHREALR-TSNAL 155 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gv------g~i~lvD~D~V-----~~sNl~R--ln----p~~~v~~~~~~~~-~~~~~ 155 (444)
.+|.|||+|.+|+.++..|+.+|. .+++++|.+.- ....++. .+ |...+ ...+. ..+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~i~~~~~~~ 98 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPL---PHNIVAHSDLA 98 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBC---CTTEEEESSTH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccC---cCCeEEECCHH
Confidence 479999999999999999999992 47899987642 1111111 12 12110 00000 12233
Q ss_pred hhcCCCcEEEEccCChHhHHHHHHH
Q 013384 156 EILSQYEIVVDATDNAPSRYMISDC 180 (444)
Q Consensus 156 ~~~~~~DvVi~~~D~~~~r~~i~~~ 180 (444)
+.+.++|+||.|+-....+..+.+.
T Consensus 99 ea~~~aDvVilav~~~~~~~vl~~i 123 (375)
T 1yj8_A 99 SVINDADLLIFIVPCQYLESVLASI 123 (375)
T ss_dssp HHHTTCSEEEECCCHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCCHHHHHHHHHHH
Confidence 5567899999999765555555544
No 251
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.30 E-value=0.032 Score=52.79 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=53.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH-
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP- 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~- 172 (444)
.+|.|||+|.+|+.++..|+. |. ++.++|.+.-....+... .+.+ .. ..+.+.++|+||.|+-+..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~--g~~~--~~-------~~~~~~~~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEE--FGSE--AV-------PLERVAEARVIFTCLPTTRE 68 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHH--HCCE--EC-------CGGGGGGCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHC--CCcc--cC-------HHHHHhCCCEEEEeCCChHH
Confidence 379999999999999999999 86 688887643211111111 1111 11 2344578999999998775
Q ss_pred hHHHHHHHHH--HcCCcEEEEc
Q 013384 173 SRYMISDCCV--VLGKPLVSGA 192 (444)
Q Consensus 173 ~r~~i~~~~~--~~~~p~i~~~ 192 (444)
.+..+.+... ..+..+|+.+
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDAT 90 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECS
T ss_pred HHHHHHHHHhhCCCCCEEEECC
Confidence 5555544322 2244455543
No 252
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.30 E-value=0.094 Score=50.31 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=50.3
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc-cc--CcceEEEE-eecCCc-ccHHhhcCCCcEE
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-IN--STVHIIEH-REALRT-SNALEILSQYEIV 164 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-ln--p~~~v~~~-~~~~~~-~~~~~~~~~~DvV 164 (444)
+++++|+|.|+ |++|+++++.|+..|. ++.++|.+.-...++.. +. ....++.+ ...++. +...++++++|+|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 56788999996 8899999999999985 67777765322222211 10 01234444 444543 3455667789999
Q ss_pred EEccC
Q 013384 165 VDATD 169 (444)
Q Consensus 165 i~~~D 169 (444)
|.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98863
No 253
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.30 E-value=0.046 Score=53.09 Aligned_cols=73 Identities=22% Similarity=0.332 Sum_probs=49.6
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCc--cc--cccccc----ccCcceEEEEeecCCcccHHhhcCCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDV--VE--LNNMHR----INSTVHIIEHREALRTSNALEILSQY 161 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~--V~--~sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~ 161 (444)
.+..||.|||+|.+|.+++..|+..|. .+|.|+|-+. ++ ...+.. ++..+++.. . ..+.++++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-----~---~~~a~~~a 75 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-----G---EYSDCHDA 75 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-----C---CGGGGTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-----C---CHHHhCCC
Confidence 455689999999999999999998886 7899999763 11 111111 223344443 1 13447899
Q ss_pred cEEEEccCCh
Q 013384 162 EIVVDATDNA 171 (444)
Q Consensus 162 DvVi~~~D~~ 171 (444)
|+||.+...+
T Consensus 76 DvVvi~ag~~ 85 (317)
T 3d0o_A 76 DLVVICAGAA 85 (317)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999887654
No 254
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.28 E-value=0.034 Score=54.50 Aligned_cols=90 Identities=21% Similarity=0.252 Sum_probs=59.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|++++|.|||.|.+|..+|+.+...|.. +..+|.-. ..... .. .....+..++++.+|+|+.++
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~-v~~~d~~~--~~~~~--~~---------~~~~~~l~ell~~sDivslh~ 202 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMK-VLCYDVVK--REDLK--EK---------GCVYTSLDELLKESDVISLHV 202 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC--CHHHH--HT---------TCEECCHHHHHHHCSEEEECC
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCce-eeecCCcc--chhhh--hc---------CceecCHHHHHhhCCEEEEcC
Confidence 468999999999999999999999999874 44455311 10000 00 011134567889999988766
Q ss_pred C-ChHhHHHHHHHHHHcCC---cEEEEc
Q 013384 169 D-NAPSRYMISDCCVVLGK---PLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~~~~---p~i~~~ 192 (444)
. +++++.+|+......=+ -+|+.+
T Consensus 203 Plt~~T~~li~~~~l~~mk~~a~lIN~a 230 (334)
T 3kb6_A 203 PYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred CCChhhccCcCHHHHhhcCCCeEEEecC
Confidence 4 67788888776554433 366654
No 255
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.27 E-value=0.049 Score=52.82 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=56.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC---CcEEEeeCCcc--cccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV---GRLGIVDHDVV--ELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv---g~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
..+|.|||+|.+|+.++..|+.+|+ ..++++|.+.- ....+.+. .+. .. .+..+.+.++|+||.|
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~--G~~--~~------~~~~e~~~~aDvVila 91 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM--GVK--LT------PHNKETVQHSDVLFLA 91 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH--TCE--EE------SCHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc--CCE--Ee------CChHHHhccCCEEEEE
Confidence 3479999999999999999999995 67999886531 11111111 111 11 1234556789999999
Q ss_pred cCChHhHHHHHHHHHH--cCCcEEEE
Q 013384 168 TDNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
+-....+..+.+.... .+..+|+.
T Consensus 92 v~~~~~~~vl~~l~~~l~~~~ivvs~ 117 (322)
T 2izz_A 92 VKPHIIPFILDEIGADIEDRHIVVSC 117 (322)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEEEC
T ss_pred eCHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 9755555555554322 24456664
No 256
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.25 E-value=0.027 Score=51.53 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=46.2
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEE-eeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGI-VDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~l-vD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~ 171 (444)
.+|.|||+|.+|..++..|+..|. ++.+ +|.+.-....+.. .. +.. ..++ .+.+.++|+||.|+-..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r~~~~~~~l~~~~g--~~~-------~~~~-~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI-PAIIANSRGPASLSSVTDRFG--ASV-------KAVE-LKDALQADVVILAVPYD 92 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC-CEEEECTTCGGGGHHHHHHHT--TTE-------EECC-HHHHTTSSEEEEESCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCCHHHHHHHHHHhC--CCc-------ccCh-HHHHhcCCEEEEeCChH
Confidence 589999999999999999999997 5666 7665322222211 11 111 1112 23467899999999654
Q ss_pred HhHHHH
Q 013384 172 PSRYMI 177 (444)
Q Consensus 172 ~~r~~i 177 (444)
..+..+
T Consensus 93 ~~~~v~ 98 (220)
T 4huj_A 93 SIADIV 98 (220)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 444333
No 257
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.24 E-value=0.08 Score=50.43 Aligned_cols=58 Identities=19% Similarity=0.314 Sum_probs=46.9
Q ss_pred HhhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 89 ~~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
..|++++|+|||.|+ +|.++|..|...|. ++++++. ...+..+.++.+|+||.+
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~------------------------~t~~L~~~~~~ADIVI~A 210 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHI------------------------KTKDLSLYTRQADLIIVA 210 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT------------------------TCSCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC------------------------CchhHHHHhhcCCEEEEC
Confidence 357899999999998 79999999999997 5777542 124566788999999999
Q ss_pred cCCh
Q 013384 168 TDNA 171 (444)
Q Consensus 168 ~D~~ 171 (444)
+..+
T Consensus 211 vg~p 214 (285)
T 3p2o_A 211 AGCV 214 (285)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 9754
No 258
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=94.23 E-value=0.024 Score=54.88 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=59.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-. . ... ...+ . ..+..++++++|+|+.++
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~-~~~-~~g~--~-------~~~l~ell~~aDvV~l~~ 204 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-E-RAK-EVNG--K-------FVDLETLLKESDVVTIHV 204 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-H-HHH-HTTC--E-------ECCHHHHHHHCSEEEECC
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-h-hHh-hcCc--c-------ccCHHHHHhhCCEEEEec
Confidence 46899999999999999999999999996 67777764321 0 000 0011 1 113456778899999887
Q ss_pred CC-hHhHHHHHHHH---HHcCCcEEEEcc
Q 013384 169 DN-APSRYMISDCC---VVLGKPLVSGAA 193 (444)
Q Consensus 169 D~-~~~r~~i~~~~---~~~~~p~i~~~~ 193 (444)
-. +.++..+++.. .+.+.-+|+.+.
T Consensus 205 p~~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 205 PLVESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp CCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 54 44665554322 233455777654
No 259
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=94.20 E-value=0.068 Score=50.34 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=56.2
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEE
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVD 166 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~ 166 (444)
+=..++|+|.|+ |.+|+.+++.|+..|. ++.++|.+..+.++ .+...++++ ++|+||.
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~Dl~d------------------~~~~~~~~~~~~~d~vih 69 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQDLDITN------------------VLAVNKFFNEKKPNVVIN 69 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTTCCTTC------------------HHHHHHHHHHHCCSEEEE
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCccCCCCC------------------HHHHHHHHHhcCCCEEEE
Confidence 445678999985 6799999999999884 67777664332211 123344555 7899998
Q ss_pred ccCChH-----------------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 167 ATDNAP-----------------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 167 ~~D~~~-----------------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+..... .-..+.++|...+..+|+.+.....|
T Consensus 70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~ 118 (292)
T 1vl0_A 70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFD 118 (292)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeEC
Confidence 764221 01345566777666788776554433
No 260
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.14 E-value=0.069 Score=51.24 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=54.4
Q ss_pred HhhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHH--hhcCCCcEEE
Q 013384 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNAL--EILSQYEIVV 165 (444)
Q Consensus 89 ~~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~--~~~~~~DvVi 165 (444)
..|++++|+|||.|+ +|.+++..|...|. ++++++.. ..+.. +.++.+|+||
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~------------------------T~~l~l~~~~~~ADIVI 215 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSG------------------------TSTEDMIDYLRTADIVI 215 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT------------------------SCHHHHHHHHHTCSEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCC------------------------CCCchhhhhhccCCEEE
Confidence 358999999999998 79999999999998 57776431 12344 6788999999
Q ss_pred EccCChHhHHHHHHHHHHcCCcEEEEcc
Q 013384 166 DATDNAPSRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 166 ~~~D~~~~r~~i~~~~~~~~~p~i~~~~ 193 (444)
.++..+.. +..-..+.+.-+|+.+.
T Consensus 216 ~Avg~p~~---I~~~~vk~GavVIDvgi 240 (300)
T 4a26_A 216 AAMGQPGY---VKGEWIKEGAAVVDVGT 240 (300)
T ss_dssp ECSCCTTC---BCGGGSCTTCEEEECCC
T ss_pred ECCCCCCC---CcHHhcCCCcEEEEEec
Confidence 99987532 11112244555666553
No 261
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.14 E-value=0.081 Score=53.93 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=58.7
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-cc----Ccce--EEE--EeecCC-cccHHhhcCCCcE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-IN----STVH--IIE--HREALR-TSNALEILSQYEI 163 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-ln----p~~~--v~~--~~~~~~-~~~~~~~~~~~Dv 163 (444)
.+|.|||+|.+|..+|..|+..|. +++++|.|.-....+++ .+ |... +.. ....+. ..+..+.++++|+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 479999999999999999999996 78899877533333322 11 1110 000 000010 1234455678999
Q ss_pred EEEccCCh----------HhHHHHHHHHHH--cCCcEEEEcc
Q 013384 164 VVDATDNA----------PSRYMISDCCVV--LGKPLVSGAA 193 (444)
Q Consensus 164 Vi~~~D~~----------~~r~~i~~~~~~--~~~p~i~~~~ 193 (444)
||.|+-++ ..+..+...... .+..+|+.++
T Consensus 82 ViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 99998766 445555444432 3445665553
No 262
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.14 E-value=0.057 Score=51.19 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=55.0
Q ss_pred hhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 91 LLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 91 L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
|++++|+|||.|+ +|.++|..|...|. ++++++. ...+..+.++.+|+||.++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~------------------------~t~~L~~~~~~ADIVI~Avg 202 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHS------------------------KTKDIGSMTRSSKIVVVAVG 202 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT------------------------TCSCHHHHHHHSSEEEECSS
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeC------------------------CcccHHHhhccCCEEEECCC
Confidence 8999999999997 79999999999987 5666542 12456677889999999997
Q ss_pred ChHhHHHHHHHHHHcCCcEEEEcccC
Q 013384 170 NAPSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
.+.. +..-..+.+.-+|+.+...
T Consensus 203 ~p~~---I~~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 203 RPGF---LNREMVTPGSVVIDVGINY 225 (276)
T ss_dssp CTTC---BCGGGCCTTCEEEECCCEE
T ss_pred CCcc---ccHhhccCCcEEEEeccCc
Confidence 6531 1111224455566665443
No 263
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.14 E-value=0.025 Score=57.27 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=49.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|+|.|.+|..+|+.|...|+ ++.++|.|.....- . ......+ .+..++++.+|+|+.++.
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~-A-~~~G~~v---------v~LeElL~~ADIVv~atg 311 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQ-A-AMDGFEV---------VTLDDAASTADIVVTTTG 311 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHH-H-HHTTCEE---------CCHHHHGGGCSEEEECCS
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhH-H-HhcCcee---------ccHHHHHhhCCEEEECCC
Confidence 5899999999999999999999999998 78888765432100 0 0001111 124567789999999886
Q ss_pred Ch
Q 013384 170 NA 171 (444)
Q Consensus 170 ~~ 171 (444)
+.
T Consensus 312 t~ 313 (464)
T 3n58_A 312 NK 313 (464)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 264
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.13 E-value=0.033 Score=50.20 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 469999999999999999999998 78998853
No 265
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.09 E-value=0.13 Score=49.80 Aligned_cols=108 Identities=12% Similarity=0.051 Sum_probs=66.6
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc-cccccc----ccC--cceEEEEeecCCc-ccHHhhcCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE-LNNMHR----INS--TVHIIEHREALRT-SNALEILSQ 160 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~-~sNl~R----lnp--~~~v~~~~~~~~~-~~~~~~~~~ 160 (444)
.++.++|+|.|+ |.+|+.+++.|+..|. ++.++|...-. ..++.. +.. ...++.+...+.. +...+++++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 102 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 102 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence 356788999997 7899999999999985 67777764321 112211 100 1235555555554 345567789
Q ss_pred CcEEEEccCChH-----------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 161 YEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 161 ~DvVi~~~D~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
+|+||.+..... .-..+-++|...++ .+|+.+.....|
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 999998865311 11245566777665 477766544433
No 266
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.09 E-value=0.032 Score=53.80 Aligned_cols=71 Identities=20% Similarity=0.268 Sum_probs=48.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCccccccccc----cc----CcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHR----IN----STVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~sNl~R----ln----p~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
.+|+|||+|.+|+.++..|+..|+ .++.++|.+.-....+.. .+ ..+++. . .+. +.++++|+|
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~--~-----~d~-~~~~~aDvV 73 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV--I-----NDW-AALADADVV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE--E-----SCG-GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE--e-----CCH-HHhCCCCEE
Confidence 479999999999999999999997 689999986422211111 11 112221 1 122 456899999
Q ss_pred EEccCChH
Q 013384 165 VDATDNAP 172 (444)
Q Consensus 165 i~~~D~~~ 172 (444)
|.|+-.+.
T Consensus 74 iiav~~~~ 81 (309)
T 1hyh_A 74 ISTLGNIK 81 (309)
T ss_dssp EECCSCGG
T ss_pred EEecCCcc
Confidence 99987654
No 267
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=94.08 E-value=0.073 Score=50.69 Aligned_cols=82 Identities=15% Similarity=0.313 Sum_probs=52.2
Q ss_pred HHHhhhcCcEEEEC-CCccHHHHHHHHHHcCCC--cEEEeeCCccccccccc----ccCcceEEEEeecCCcc-cHHhh-
Q 013384 87 GQSNLLKSSILVIG-AGGLGSPALLYLAACGVG--RLGIVDHDVVELNNMHR----INSTVHIIEHREALRTS-NALEI- 157 (444)
Q Consensus 87 ~q~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg--~i~lvD~D~V~~sNl~R----lnp~~~v~~~~~~~~~~-~~~~~- 157 (444)
....|++++|+|.| .||+|..+++.|+..|.+ ++.++|.+.-....+.. ..+..++..+...++.. ....+
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~ 106 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI 106 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence 34578999999998 567999999999999885 78888765433222222 23455566666555532 22222
Q ss_pred ------cCCCcEEEEcc
Q 013384 158 ------LSQYEIVVDAT 168 (444)
Q Consensus 158 ------~~~~DvVi~~~ 168 (444)
+...|+||.+.
T Consensus 107 ~~~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 107 ENLPQEFKDIDILVNNA 123 (287)
T ss_dssp HTSCGGGCSCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 23567777653
No 268
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=94.07 E-value=0.17 Score=48.69 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=49.8
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCC------CcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhc-CCC
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGV------GRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEIL-SQY 161 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gv------g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~-~~~ 161 (444)
|++.+|+|.| .|++|+.+++.|+..|. -++.++|.+.-.... .....++.+...+.. +...+++ .++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 87 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVEARP 87 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHHTCC
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHhcCC
Confidence 4566899999 57899999999999983 578888765321110 012245555556654 3344556 489
Q ss_pred cEEEEccC
Q 013384 162 EIVVDATD 169 (444)
Q Consensus 162 DvVi~~~D 169 (444)
|+||.+..
T Consensus 88 d~vih~A~ 95 (342)
T 2hrz_A 88 DVIFHLAA 95 (342)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998865
No 269
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.05 E-value=0.099 Score=51.10 Aligned_cols=86 Identities=20% Similarity=0.300 Sum_probs=57.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcC---------CCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACG---------VGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEI 163 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~G---------vg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~Dv 163 (444)
.-+|.|+|+|.+|+.+++.|.... +.-..+.|.+...... +.. . .+ ..+..+++ +.|+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~---~~~-~-------~~-~~d~~~ll-~iDv 69 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRA---IPQ-E-------LL-RAEPFDLL-EADL 69 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCS---SCG-G-------GE-ESSCCCCT-TCSE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhc---cCc-c-------cc-cCCHHHHh-CCCE
Confidence 357999999999999999988753 3334566765322111 110 0 01 12334455 8999
Q ss_pred EEEccCChHhHHHHHHHHHHcCCcEEEE
Q 013384 164 VVDATDNAPSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 164 Vi~~~D~~~~r~~i~~~~~~~~~p~i~~ 191 (444)
|++|+.+...-+.+...|.+.|+.+|.+
T Consensus 70 Vve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 70 VVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp EEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred EEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 9999998765555666788999999985
No 270
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=94.05 E-value=0.049 Score=51.69 Aligned_cols=67 Identities=21% Similarity=0.302 Sum_probs=46.5
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
.+++|+|+|+||.|..++..|...|+.+|+|++.+.-....|.. +.. . +...+ . +..+|+||+||-.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~--~---~~~~~------~-~~~~DivInaTp~ 185 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY--A---YINSL------E-NQQADILVNVTSI 185 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC--E---EESCC------T-TCCCSEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--c---cchhh------h-cccCCEEEECCCC
Confidence 46789999999999999999999999999998765322222222 211 1 11110 1 3579999999864
No 271
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=94.05 E-value=0.091 Score=50.40 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=56.5
Q ss_pred hhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.|++++|+|||.|. +|.++|..|...|. ++++++.. ..+..+.++.+|+||.++
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~------------------------t~~L~~~~~~ADIVI~Av 216 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK------------------------TAHLDEEVNKGDILVVAT 216 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT------------------------CSSHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC------------------------cccHHHHhccCCEEEECC
Confidence 57899999999996 79999999999984 67776421 246677889999999999
Q ss_pred CChHhHHHHHHHHHHcCCcEEEEccc
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSGAAL 194 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~~~~ 194 (444)
..+.. |..-..+.+.-+|+.+..
T Consensus 217 g~p~~---I~~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 217 GQPEM---VKGEWIKPGAIVIDCGIN 239 (301)
T ss_dssp CCTTC---BCGGGSCTTCEEEECCCB
T ss_pred CCccc---CCHHHcCCCcEEEEccCC
Confidence 88642 222223455566776654
No 272
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.04 E-value=0.06 Score=50.58 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=55.2
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccCCh
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATDNA 171 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D~~ 171 (444)
+|+|.|+ |.+|+.+++.|...|. +++.++....+..| .+...+.++ ++|+||.+....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~D~~d------------------~~~~~~~~~~~~~d~vi~~a~~~ 67 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKLLDITN------------------ISQVQQVVQEIRPHIIIHCAAYT 67 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTTSCTTC------------------HHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccccCCCC------------------HHHHHHHHHhcCCCEEEECCccc
Confidence 7999995 7899999999999884 67776653222211 123344455 689999876422
Q ss_pred ---------Hh--------HHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 172 ---------PS--------RYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 172 ---------~~--------r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
.. -..+-++|.+.+..+|+.+.....|
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 68 KVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQ 111 (287)
T ss_dssp CHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred ChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcC
Confidence 11 1245667777777888877554433
No 273
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.04 E-value=0.064 Score=52.42 Aligned_cols=95 Identities=8% Similarity=0.048 Sum_probs=56.6
Q ss_pred CcEEEECCCccHHHHHHHHHHcCC------CcEEEeeCCcc-----ccccccc--ccC----cceEEEEeecCC-cccHH
Q 013384 94 SSILVIGAGGLGSPALLYLAACGV------GRLGIVDHDVV-----ELNNMHR--INS----TVHIIEHREALR-TSNAL 155 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gv------g~i~lvD~D~V-----~~sNl~R--lnp----~~~v~~~~~~~~-~~~~~ 155 (444)
.+|.|||+|.+|+.++..|+..|. .+++++|.+.- ....+.+ .++ ...+ ...+. ..+..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~ 85 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKL---PPNVVAVPDVV 85 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCC---CTTEEEESSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccC---ccCeEEEcCHH
Confidence 479999999999999999999983 47899987643 1111111 111 1100 00011 12334
Q ss_pred hhcCCCcEEEEccCChHhHHHHHHHHHH--cCCcEEEE
Q 013384 156 EILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 191 (444)
Q Consensus 156 ~~~~~~DvVi~~~D~~~~r~~i~~~~~~--~~~p~i~~ 191 (444)
+.+.++|+||.|+-....+..+.+.... .+..+|+.
T Consensus 86 ~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~ 123 (354)
T 1x0v_A 86 QAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISL 123 (354)
T ss_dssp HHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEEC
T ss_pred HHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 5567899999999765555555544321 23445554
No 274
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.00 E-value=0.066 Score=48.97 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=29.5
Q ss_pred hcCcEEEEC-CCccHHHHHHHHHHcCC-CcEEEeeCCc
Q 013384 92 LKSSILVIG-AGGLGSPALLYLAACGV-GRLGIVDHDV 127 (444)
Q Consensus 92 ~~~~VlIvG-~GglGs~ia~~La~~Gv-g~i~lvD~D~ 127 (444)
++++|+|.| .|++|.++++.|+..|. .++.++|.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~ 39 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV 39 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 467899998 56799999999999995 5788887654
No 275
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=93.96 E-value=0.065 Score=53.64 Aligned_cols=93 Identities=18% Similarity=0.235 Sum_probs=58.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|...-... ..+ ...+.. ..+..++++.+|+|+.++-
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~-~~~---~~G~~~------~~~l~ell~~aDvV~l~~P 256 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPES-VEK---ELNLTW------HATREDMYPVCDVVTLNCP 256 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHH-HHH---HHTCEE------CSSHHHHGGGCSEEEECSC
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchh-hHh---hcCcee------cCCHHHHHhcCCEEEEecC
Confidence 5899999999999999999999998885 5667665321100 000 000110 0245678889999998875
Q ss_pred -ChHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 170 -NAPSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 170 -~~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
++.++..+++.... .+.-+|+.+.
T Consensus 257 lt~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 257 LHPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 45667666543322 2334777653
No 276
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.93 E-value=0.068 Score=51.64 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=47.6
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----cccc----ccCcceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMHR----INSTVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
||.|+|+|.+|+.++..|+..|++++.|+|-|.-... ++.. .+..+++.... + .+.++++|+||.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~------d-~~a~~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSN------S-YEDMRGSDIVLV 73 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEES------C-GGGGTTCSEEEE
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECC------C-HHHhCCCCEEEE
Confidence 6999999999999999999999967999998631111 1111 23344555431 1 234689999998
Q ss_pred ccCCh
Q 013384 167 ATDNA 171 (444)
Q Consensus 167 ~~D~~ 171 (444)
+...+
T Consensus 74 ~ag~~ 78 (308)
T 2d4a_B 74 TAGIG 78 (308)
T ss_dssp CCSCC
T ss_pred eCCCC
Confidence 85543
No 277
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=93.92 E-value=0.036 Score=54.61 Aligned_cols=93 Identities=22% Similarity=0.266 Sum_probs=59.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|++++|.|||+|.+|..+|+.|...|. ++..+|...-. .... ...+.. . .+..++++.+|+|+.++-
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~~~---~~g~~~----~--~~l~ell~~aDvV~l~~P 232 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD--GVER---ALGLQR----V--STLQDLLFHSDCVTLHCG 232 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT--THHH---HHTCEE----C--SSHHHHHHHCSEEEECCC
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch--hhHh---hcCCee----c--CCHHHHHhcCCEEEEcCC
Confidence 6899999999999999999999999987 57777754221 0000 000110 0 235677788999998764
Q ss_pred -ChHhHHHHHHHHHH---cCCcEEEEccc
Q 013384 170 -NAPSRYMISDCCVV---LGKPLVSGAAL 194 (444)
Q Consensus 170 -~~~~r~~i~~~~~~---~~~p~i~~~~~ 194 (444)
+..++..+++.... .+.-+|+.+..
T Consensus 233 ~t~~t~~li~~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 233 LNEHNHHLINDFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp CCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred CCHHHHHHhHHHHHhcCCCCCEEEECCCC
Confidence 45666666543322 23346776543
No 278
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=93.90 E-value=0.39 Score=40.50 Aligned_cols=87 Identities=16% Similarity=0.085 Sum_probs=52.6
Q ss_pred HHHhhhcCcEEEECC----CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCc
Q 013384 87 GQSNLLKSSILVIGA----GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYE 162 (444)
Q Consensus 87 ~q~~L~~~~VlIvG~----GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~D 162 (444)
+...++..+|+|||+ |.+|..++++|...|. ++..+|...- ++... .. -.+..++....|
T Consensus 8 ~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~~------------~i~G~--~~-~~s~~el~~~vD 71 (138)
T 1y81_A 8 GSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNYD------------EIEGL--KC-YRSVRELPKDVD 71 (138)
T ss_dssp ------CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTCS------------EETTE--EC-BSSGGGSCTTCC
T ss_pred cccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCCC------------eECCe--ee-cCCHHHhCCCCC
Confidence 445677889999999 9999999999999998 4555443321 11000 11 123345556799
Q ss_pred EEEEccCChHhHHHHHHHHHHcCCcEEE
Q 013384 163 IVVDATDNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 163 vVi~~~D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+|+-++-.......+. .|...+++.+.
T Consensus 72 lvii~vp~~~v~~v~~-~~~~~g~~~i~ 98 (138)
T 1y81_A 72 VIVFVVPPKVGLQVAK-EAVEAGFKKLW 98 (138)
T ss_dssp EEEECSCHHHHHHHHH-HHHHTTCCEEE
T ss_pred EEEEEeCHHHHHHHHH-HHHHcCCCEEE
Confidence 9999988544454554 45567776543
No 279
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.89 E-value=0.093 Score=50.54 Aligned_cols=104 Identities=13% Similarity=0.226 Sum_probs=61.5
Q ss_pred CcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccc--ccccccccCcceEEEEeecCCc-ccHHhhcCC--CcEEEEc
Q 013384 94 SSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHRINSTVHIIEHREALRT-SNALEILSQ--YEIVVDA 167 (444)
Q Consensus 94 ~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~--~DvVi~~ 167 (444)
++|+|.| .|++|+.+++.|+..|. ++.++|...-. ..++..+...-+++.+...++. +...+++++ +|+||.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 4799999 57799999999999985 67777753211 1111112111124445555554 334556666 9999988
Q ss_pred cCChH-----------------hHHHHHHHHHHcCCc--EEEEcccCCcc
Q 013384 168 TDNAP-----------------SRYMISDCCVVLGKP--LVSGAALGLEG 198 (444)
Q Consensus 168 ~D~~~-----------------~r~~i~~~~~~~~~p--~i~~~~~g~~G 198 (444)
..... .-..+.++|...++. +|+.+.....|
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 65321 012455667776653 77776554443
No 280
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=93.88 E-value=0.095 Score=36.68 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=30.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013384 7 STDVARVLGEIETLKAAKSDIDYRISALEAQLRD 40 (444)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (444)
.++.+.|..|.++|+++++.|.+++++|+++|.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999873
No 281
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.87 E-value=0.17 Score=46.25 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=54.8
Q ss_pred cCcEEEECCCccHHHHHHH--HHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLY--LAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~--La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
..+|+|||+|.+|..++.+ ....|+.=+.++|.|.-.. ++.-..+.+.. .++..++++..|+|+-|+.+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~---g~~i~gv~V~~------~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKI---GTEVGGVPVYN------LDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTT---TCEETTEEEEE------GGGHHHHCSSCCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHH---HhHhcCCeeec------hhhHHHHHHhCCEEEEecCc
Confidence 3689999999999999995 3356777788999765322 12111222221 24466777666999988876
Q ss_pred hHhHHHHHHHHHHcCCcEE
Q 013384 171 APSRYMISDCCVVLGKPLV 189 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i 189 (444)
... ..+.+.|...|+.-|
T Consensus 156 ~~~-~ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 156 VAA-QSITDRLVALGIKGI 173 (215)
T ss_dssp HHH-HHHHHHHHHTTCCEE
T ss_pred hhH-HHHHHHHHHcCCCEE
Confidence 544 467777888888744
No 282
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.87 E-value=0.024 Score=53.02 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=45.2
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHhH
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSR 174 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~r 174 (444)
+|.|||+|.+|+.++..|+..|..+++++|.+.-....+.... .+ ... .+..+.+ ++|+||.|+-....+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~-g~--~~~------~~~~~~~-~~D~vi~~v~~~~~~ 71 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-GV--ETS------ATLPELH-SDDVLILAVKPQDME 71 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-CC--EEE------SSCCCCC-TTSEEEECSCHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc-CC--EEe------CCHHHHh-cCCEEEEEeCchhHH
Confidence 6999999999999999999999557888886532211111110 11 111 1122445 899999999743333
Q ss_pred H
Q 013384 175 Y 175 (444)
Q Consensus 175 ~ 175 (444)
.
T Consensus 72 ~ 72 (263)
T 1yqg_A 72 A 72 (263)
T ss_dssp H
T ss_pred H
Confidence 3
No 283
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.84 E-value=0.048 Score=53.71 Aligned_cols=94 Identities=15% Similarity=0.172 Sum_probs=57.3
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--cc----CcceEEEEeecCC-cccHHhhcCCCcEEEEc
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--IN----STVHIIEHREALR-TSNALEILSQYEIVVDA 167 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--ln----p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~ 167 (444)
+|.|||+|.+|+.++..|+.+|. +++++|.+.-....+.. .+ +...+ ...+. ..+..+.+.++|+||.|
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~aDvVila 92 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQL---ASNITFTSDVEKAYNGAEIILFV 92 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBC---CTTEEEESCHHHHHTTCSSEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCccccccccccc---ccceeeeCCHHHHHcCCCEEEEC
Confidence 79999999999999999999985 78888876322222221 11 11110 00000 12334556789999999
Q ss_pred cCChHhHHHHHH----HH--HHc-CCcEEEEc
Q 013384 168 TDNAPSRYMISD----CC--VVL-GKPLVSGA 192 (444)
Q Consensus 168 ~D~~~~r~~i~~----~~--~~~-~~p~i~~~ 192 (444)
+-....+..+.. .. ... +..+|+..
T Consensus 93 v~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~ 124 (366)
T 1evy_A 93 IPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCT 124 (366)
T ss_dssp CCHHHHHHHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred CChHHHHHHHHHhHHHHHHhcCccCCEEEEEC
Confidence 976555555544 32 233 67788754
No 284
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.83 E-value=0.13 Score=49.53 Aligned_cols=104 Identities=20% Similarity=0.162 Sum_probs=60.9
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccc-cccc--CcceEEEEeecCCc-ccHHhhcC--CCcEEE
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNM-HRIN--STVHIIEHREALRT-SNALEILS--QYEIVV 165 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl-~Rln--p~~~v~~~~~~~~~-~~~~~~~~--~~DvVi 165 (444)
+++|+|.| .|++|+.+++.|+..|. ++.++|.+.-..... .++. ....+..+...+.. +...++++ +.|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 46899998 57799999999999996 577776543222111 1110 01234455555553 33455565 799999
Q ss_pred EccCCh-----------------HhHHHHHHHHHHcCC-cEEEEcccCCc
Q 013384 166 DATDNA-----------------PSRYMISDCCVVLGK-PLVSGAALGLE 197 (444)
Q Consensus 166 ~~~D~~-----------------~~r~~i~~~~~~~~~-p~i~~~~~g~~ 197 (444)
.+.... ..-..+-++|.+.+. .+|+.+.....
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~ 133 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVY 133 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGB
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEe
Confidence 886431 111234456666664 57766654433
No 285
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.80 E-value=0.027 Score=56.51 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=50.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccC-cceE-----------EEEeecCCc------
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINS-TVHI-----------IEHREALRT------ 151 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp-~~~v-----------~~~~~~~~~------ 151 (444)
.+...+|+|+|+|.+|..+++.+..+|. +++++|.+.....-+..+.. .+.+ ..|...+++
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence 3678999999999999999999999998 78898876432211111111 0110 112222222
Q ss_pred -ccHHhhcCCCcEEEEccC
Q 013384 152 -SNALEILSQYEIVVDATD 169 (444)
Q Consensus 152 -~~~~~~~~~~DvVi~~~D 169 (444)
++..+.+.++|+||.|.-
T Consensus 266 ~~~l~e~l~~aDVVI~tvl 284 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTAL 284 (405)
T ss_dssp HHHHHHHHHTCSEEEECCC
T ss_pred HhHHHHHhcCCCEEEECCc
Confidence 255677899999998853
No 286
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.79 E-value=0.082 Score=50.77 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=49.2
Q ss_pred cEEEECCCccHHHHHHHHHHcCCC-cEEEeeCCc--cc--cccccccc----CcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 95 SILVIGAGGLGSPALLYLAACGVG-RLGIVDHDV--VE--LNNMHRIN----STVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg-~i~lvD~D~--V~--~sNl~Rln----p~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
||.|+|+|.+|+.++..|+..|.. ++.|+|-+. ++ .-++.+.+ ...++.... + .+.++++|+||
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~------d-~~a~~~aDiVV 74 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA------D-YSLLKGSEIIV 74 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES------C-GGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeC------C-HHHhCCCCEEE
Confidence 699999999999999999999864 899999865 22 12343422 233444321 2 45568999999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
.+...+
T Consensus 75 iaag~~ 80 (294)
T 1oju_A 75 VTAGLA 80 (294)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 887654
No 287
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=93.77 E-value=0.099 Score=49.79 Aligned_cols=58 Identities=24% Similarity=0.367 Sum_probs=46.2
Q ss_pred HhhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 89 ~~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
..|++++|+|||.|+ +|.++|..|...|. ++++++.. ..+..+.++.+|+||.+
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~------------------------T~~L~~~~~~ADIVI~A 211 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRF------------------------TRDLADHVSRADLVVVA 211 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTT------------------------CSCHHHHHHTCSEEEEC
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC------------------------CcCHHHHhccCCEEEEC
Confidence 357899999999988 79999999999987 56665321 23566778899999999
Q ss_pred cCCh
Q 013384 168 TDNA 171 (444)
Q Consensus 168 ~D~~ 171 (444)
+..+
T Consensus 212 vg~p 215 (286)
T 4a5o_A 212 AGKP 215 (286)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 8654
No 288
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=93.76 E-value=0.22 Score=47.62 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=59.9
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcC--CCcEEEEccC
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILS--QYEIVVDATD 169 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvVi~~~D 169 (444)
++|+|.|+ |.+|+.+++.|+..|. ++.++|...-.. ...+.+ .++.+...+.. +...++++ ++|+||.+..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGH--EDAITE--GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCC--GGGSCT--TSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCcCc--hhhcCC--CcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 47999984 7799999999999994 677776532111 011222 23344445543 33445566 8999998864
Q ss_pred ChH-----------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 170 NAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 170 ~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
... .-..+-++|.+.++ .+|+.+..+..|
T Consensus 77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 77 DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG 123 (330)
T ss_dssp CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGC
T ss_pred ccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeC
Confidence 221 11234556666664 577766554443
No 289
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.75 E-value=0.097 Score=53.29 Aligned_cols=93 Identities=16% Similarity=0.276 Sum_probs=55.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc-ccccc-cCcceEEEEeecCCcccHHhhcCC-CcEEEE
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN-NMHRI-NSTVHIIEHREALRTSNALEILSQ-YEIVVD 166 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s-Nl~Rl-np~~~v~~~~~~~~~~~~~~~~~~-~DvVi~ 166 (444)
.+++++|+|||.|+.|..+|+.|...|. ++++.|......+ ...++ ...+++. ... ...+++.+ +|+||-
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~----~~~~~~~~~~d~vv~ 78 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEEGIKVV--CGS----HPLELLDEDFCYMIK 78 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHTTCEEE--ESC----CCGGGGGSCEEEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhCCCEEE--ECC----ChHHhhcCCCCEEEE
Confidence 4678999999999999999999999995 7888887543211 11111 1233332 111 11234455 999997
Q ss_pred ccCChHhHHHHHHHHHHcCCcEEE
Q 013384 167 ATDNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 167 ~~D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+..-+..... -..++..++|+++
T Consensus 79 spgi~~~~p~-~~~a~~~gi~v~~ 101 (451)
T 3lk7_A 79 NPGIPYNNPM-VKKALEKQIPVLT 101 (451)
T ss_dssp CTTSCTTSHH-HHHHHHTTCCEEC
T ss_pred CCcCCCCChh-HHHHHHCCCcEEe
Confidence 6543322222 2245566666663
No 290
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.74 E-value=0.12 Score=48.80 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=34.6
Q ss_pred CCHHHHHhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 83 FGVEGQSNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 83 ~g~~~q~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
+.......|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 23 ~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 66 (275)
T 4imr_A 23 MRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVK 66 (275)
T ss_dssp TSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 334556678999999998 56799999999999997 67777754
No 291
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=93.73 E-value=0.032 Score=56.19 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=57.8
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|++++|.|||+|.+|..+|+.|...|. ++..+|.+.-.. . ... ....+..++++.+|+|+.++
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~yd~~~~~~-----~-~~~--------~~~~sl~ell~~aDvV~lhv 216 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGM-TVRYYDTSDKLQ-----Y-GNV--------KPAASLDELLKTSDVVSLHV 216 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTCCCC-----B-TTB--------EECSSHHHHHHHCSEEEECC
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCcchhc-----c-cCc--------EecCCHHHHHhhCCEEEEeC
Confidence 46899999999999999999999999997 677777542110 0 000 01135677888999999887
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
. ++.++..++..... .+.-+|+.+-
T Consensus 217 Plt~~T~~li~~~~l~~mk~gailIN~aR 245 (416)
T 3k5p_A 217 PSSKSTSKLITEAKLRKMKKGAFLINNAR 245 (416)
T ss_dssp CC-----CCBCHHHHHHSCTTEEEEECSC
T ss_pred CCCHHHhhhcCHHHHhhCCCCcEEEECCC
Confidence 5 45566666544322 3445777653
No 292
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.72 E-value=0.064 Score=53.11 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=49.2
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHH----hhc-CCCcEEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNAL----EIL-SQYEIVVD 166 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~----~~~-~~~DvVi~ 166 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+.-...-+.++.-.. .++..-..++.. ++. ..+|+|||
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE---FVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE---EECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE---EEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 4678999999999999999999999999999875432211111122111 111110011111 111 36999999
Q ss_pred ccCChHhHH
Q 013384 167 ATDNAPSRY 175 (444)
Q Consensus 167 ~~D~~~~r~ 175 (444)
|+....+..
T Consensus 270 ~~g~~~~~~ 278 (378)
T 3uko_A 270 CIGNVSVMR 278 (378)
T ss_dssp CSCCHHHHH
T ss_pred CCCCHHHHH
Confidence 999865533
No 293
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.71 E-value=0.087 Score=51.23 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=47.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----cccc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMHR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.||.|||+|.+|+.++..|+..|...+.|+|-|.-... .+.+ .....++... .+. +.++++|+||
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t------~d~-~al~~aD~Vi 77 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS------NTY-DDLAGADVVI 77 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE------CCG-GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC------CCH-HHhCCCCEEE
Confidence 58999999999999999999999855999997631111 1111 1222333332 122 4578999999
Q ss_pred EccCC
Q 013384 166 DATDN 170 (444)
Q Consensus 166 ~~~D~ 170 (444)
.+...
T Consensus 78 ~a~g~ 82 (322)
T 1t2d_A 78 VTAGF 82 (322)
T ss_dssp ECCSC
T ss_pred EeCCC
Confidence 98743
No 294
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=93.70 E-value=0.024 Score=55.46 Aligned_cols=93 Identities=14% Similarity=0.124 Sum_probs=58.5
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|.+.-........ .+ . ..+..++++++|+|+.++
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~--g~--~-------~~~l~e~l~~aDvVi~~v 218 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEF--QA--E-------FVSTPELAAQSDFIVVAC 218 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTT--TC--E-------ECCHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhc--Cc--e-------eCCHHHHHhhCCEEEEeC
Confidence 36889999999999999999999999997 688888543211111000 11 1 013456678899999887
Q ss_pred CCh-HhHHHHHH-HH--HHcCCcEEEEcc
Q 013384 169 DNA-PSRYMISD-CC--VVLGKPLVSGAA 193 (444)
Q Consensus 169 D~~-~~r~~i~~-~~--~~~~~p~i~~~~ 193 (444)
-.. .++..+++ .. .+.+.-+|+.+.
T Consensus 219 p~~~~t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 219 SLTPATEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp CCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred CCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 543 44544432 21 223445676553
No 295
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.68 E-value=0.13 Score=52.63 Aligned_cols=93 Identities=12% Similarity=0.202 Sum_probs=54.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC---CCcEEEEccC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS---QYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~---~~DvVi~~~D 169 (444)
..+|.|||+|.+|+.++.+|+..|. ++.++|.+.-....+....+...+... .+..++++ ++|+||.|+-
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~gi~~~------~s~~e~v~~l~~aDvVilavp 77 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRTTSKTEEVFKEHQDKNLVFT------KTLEEFVGSLEKPRRIMLMVQ 77 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTTTSCEEEC------SSHHHHHHTBCSSCEEEECCC
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHhCcCCCeEEe------CCHHHHHhhccCCCEEEEEcc
Confidence 3689999999999999999999997 688888653221111111110011111 12334433 3788887876
Q ss_pred Ch-HhHHHHHHHHH--HcCCcEEEEc
Q 013384 170 NA-PSRYMISDCCV--VLGKPLVSGA 192 (444)
Q Consensus 170 ~~-~~r~~i~~~~~--~~~~p~i~~~ 192 (444)
.. ..+..+.+... ..+..+|+.+
T Consensus 78 ~~~~v~~vl~~l~~~l~~g~iiId~s 103 (474)
T 2iz1_A 78 AGAATDATIKSLLPLLDIGDILIDGG 103 (474)
T ss_dssp TTHHHHHHHHHHGGGCCTTCEEEECS
T ss_pred CchHHHHHHHHHHhhCCCCCEEEECC
Confidence 63 45555554432 2345566654
No 296
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.67 E-value=0.037 Score=51.46 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=48.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCC---CcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 94 SSILVIGAGGLGSPALLYLAACGV---GRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gv---g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
.+|.|||+|.+|+.++..|+..|. .++.++|.+.-....+.. ...+.. ..+..+.++++|+||.|+..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~---~~g~~~------~~~~~e~~~~aDvVilav~~ 73 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASE---KYGLTT------TTDNNEVAKNADILILSIKP 73 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHH---HHCCEE------CSCHHHHHHHCSEEEECSCT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHH---HhCCEE------eCChHHHHHhCCEEEEEeCH
Confidence 589999999999999999999996 488898875322211111 001111 12344566789999999954
Q ss_pred hHhHHHH
Q 013384 171 APSRYMI 177 (444)
Q Consensus 171 ~~~r~~i 177 (444)
...+..+
T Consensus 74 ~~~~~v~ 80 (247)
T 3gt0_A 74 DLYASII 80 (247)
T ss_dssp TTHHHHC
T ss_pred HHHHHHH
Confidence 4444333
No 297
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.64 E-value=0.051 Score=53.86 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=32.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|+|+|.+|..+|+.|...|. ++.+.|.|.
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~ 206 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNK 206 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 4788999999999999999999999998 577888654
No 298
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.62 E-value=0.061 Score=51.06 Aligned_cols=80 Identities=10% Similarity=0.001 Sum_probs=50.7
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCC-cEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg-~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~ 171 (444)
..+|.|||+|.+|+.++..|+..|.+ ++.++|.+.-....+... .+.... ..+..+.+.++|+||.|+-..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~--g~~~~~------~~~~~~~~~~aDvVilavp~~ 77 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER--GIVDEA------TADFKVFAALADVIILAVPIK 77 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT--TSCSEE------ESCTTTTGGGCSEEEECSCHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc--CCcccc------cCCHHHhhcCCCEEEEcCCHH
Confidence 35899999999999999999999753 688887653221111111 110000 012234557899999999776
Q ss_pred HhHHHHHHH
Q 013384 172 PSRYMISDC 180 (444)
Q Consensus 172 ~~r~~i~~~ 180 (444)
..+..+.+.
T Consensus 78 ~~~~v~~~l 86 (290)
T 3b1f_A 78 KTIDFIKIL 86 (290)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555554
No 299
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.60 E-value=0.13 Score=52.18 Aligned_cols=71 Identities=14% Similarity=0.178 Sum_probs=46.7
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-cc----Ccc-----------eEEEEeecCCcccHHhhc
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-IN----STV-----------HIIEHREALRTSNALEIL 158 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-ln----p~~-----------~v~~~~~~~~~~~~~~~~ 158 (444)
+|.|||+|.+|+.+|..|+..|. +++++|.+.-....+++ .. |.. .+.. ..+..+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~------t~~~~~~~ 74 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG------TTDFKKAV 74 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE------ESCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE------eCCHHHHh
Confidence 69999999999999999999996 68888875432222222 11 110 1111 12333456
Q ss_pred CCCcEEEEccCChH
Q 013384 159 SQYEIVVDATDNAP 172 (444)
Q Consensus 159 ~~~DvVi~~~D~~~ 172 (444)
.++|+||.|+-++.
T Consensus 75 ~~aDvviiaVptp~ 88 (436)
T 1mv8_A 75 LDSDVSFICVGTPS 88 (436)
T ss_dssp HTCSEEEECCCCCB
T ss_pred ccCCEEEEEcCCCc
Confidence 78999999986654
No 300
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=93.59 E-value=0.051 Score=53.86 Aligned_cols=91 Identities=13% Similarity=0.209 Sum_probs=58.4
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|... ...-. ....+ ...+..++++.+|+|+.++
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~--~~~g~---------~~~~l~ell~~aDvV~l~~ 238 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSML--EENGV---------EPASLEDVLTKSDFIFVVA 238 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHH--HHTTC---------EECCHHHHHHSCSEEEECS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHH--hhcCe---------eeCCHHHHHhcCCEEEEcC
Confidence 46889999999999999999999988886 677777542 11000 00111 1234677889999999876
Q ss_pred C-ChHhHHHHHHHHHH---cCCcEEEEc
Q 013384 169 D-NAPSRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 169 D-~~~~r~~i~~~~~~---~~~p~i~~~ 192 (444)
- ++.++..++..... .+.-+|+.+
T Consensus 239 Plt~~T~~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 239 AVTSENKRFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp CSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred cCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence 4 55677777654433 344577765
No 301
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.58 E-value=0.14 Score=49.43 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=61.1
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccc-------cccccccc--CcceEEEEeecCCc-ccHHhhcC--
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVE-------LNNMHRIN--STVHIIEHREALRT-SNALEILS-- 159 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~-------~sNl~Rln--p~~~v~~~~~~~~~-~~~~~~~~-- 159 (444)
+++|+|.| .|++|+.+++.|+..|. ++.++|...-. ...+.++. ....++.+...++. +...++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 36799998 58899999999999995 67777754321 11111111 11234445555554 33445565
Q ss_pred CCcEEEEccCChH-----------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 160 QYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 160 ~~DvVi~~~D~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
++|+||.+..... .-..+.++|.+.++ .+|+.+.....|
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 7999998865311 11234456666664 477666544333
No 302
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.56 E-value=0.11 Score=50.96 Aligned_cols=80 Identities=26% Similarity=0.371 Sum_probs=48.9
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeec-CCcccH----Hhhc--CCCcEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREA-LRTSNA----LEIL--SQYEIV 164 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~-~~~~~~----~~~~--~~~DvV 164 (444)
.+.+|+|+|+|++|..+++.+...|...+..+|.+.-...-+..+...+ ..+... .+.++. .++. ..+|+|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~--~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEV--VTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTC--EEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhc--ccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 4678999999999999999999999988988885432111111131111 112111 111111 2222 369999
Q ss_pred EEccCChHh
Q 013384 165 VDATDNAPS 173 (444)
Q Consensus 165 i~~~D~~~~ 173 (444)
|||+....+
T Consensus 257 id~~g~~~~ 265 (363)
T 3m6i_A 257 LECTGVESS 265 (363)
T ss_dssp EECSCCHHH
T ss_pred EECCCChHH
Confidence 999998654
No 303
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.55 E-value=0.034 Score=55.41 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=58.1
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|+ ++..+|...-.. . ......+..++++.+|+|+.++-
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~------~---------~g~~~~~l~ell~~aDvV~l~~P 176 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW-KVLVCDPPRQAR------E---------PDGEFVSLERLLAEADVISLHTP 176 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECHHHHHH------S---------TTSCCCCHHHHHHHCSEEEECCC
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCChhhh------c---------cCcccCCHHHHHHhCCEEEEecc
Confidence 6899999999999999999999999997 566766432110 0 00112345677889999998864
Q ss_pred -ChH----hHHHHHHHHHH---cCCcEEEEc
Q 013384 170 -NAP----SRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 170 -~~~----~r~~i~~~~~~---~~~p~i~~~ 192 (444)
+.. ++..+++.... .+.-+|+.+
T Consensus 177 lt~~g~~~T~~li~~~~l~~mk~gailIN~s 207 (380)
T 2o4c_A 177 LNRDGEHPTRHLLDEPRLAALRPGTWLVNAS 207 (380)
T ss_dssp CCSSSSSCCTTSBCHHHHHTSCTTEEEEECS
T ss_pred CccccccchhhhcCHHHHhhCCCCcEEEECC
Confidence 444 66666543332 233466665
No 304
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=93.54 E-value=0.31 Score=47.17 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=47.7
Q ss_pred cEEEECC-CccHHHHHHHHHHc-CCCcEEEeeCCcc--cccccccccCcceEEEEeecCCc-ccHHhhcC--CCcEEEEc
Q 013384 95 SILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVV--ELNNMHRINSTVHIIEHREALRT-SNALEILS--QYEIVVDA 167 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~V--~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvVi~~ 167 (444)
+|+|.|+ |++|+.+++.|+.. |. ++.++|...- ...++..+.....++.+...++. +...++++ ++|+||.+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCC-eEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 5999995 88999999999997 44 6777775431 11222222222345556666664 33455565 89999988
Q ss_pred cC
Q 013384 168 TD 169 (444)
Q Consensus 168 ~D 169 (444)
..
T Consensus 81 A~ 82 (361)
T 1kew_A 81 AA 82 (361)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 305
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=93.54 E-value=0.073 Score=50.72 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=55.8
Q ss_pred hhhcCcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+++++|+|||.|. +|.++|..|...| .++++++. ...+..+.++.+|+||.++
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~g-AtVtv~hs------------------------~t~~L~~~~~~ADIVI~Av 210 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAG-CTTTVTHR------------------------FTKNLRHHVENADLLIVAV 210 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTT-CEEEEECS------------------------SCSCHHHHHHHCSEEEECS
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCC-CeEEEEeC------------------------CchhHHHHhccCCEEEECC
Confidence 57899999999997 6999999999998 46777642 1245677788999999999
Q ss_pred CChHhHHHHHHHHHHcCCcEEEEccc
Q 013384 169 DNAPSRYMISDCCVVLGKPLVSGAAL 194 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~~~~~ 194 (444)
..+.. |..-..+.+.-+|+.+..
T Consensus 211 g~p~l---I~~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 211 GKPGF---IPGDWIKEGAIVIDVGIN 233 (288)
T ss_dssp CCTTC---BCTTTSCTTCEEEECCCE
T ss_pred CCcCc---CCHHHcCCCcEEEEccCC
Confidence 87642 211113455667776644
No 306
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=93.51 E-value=0.019 Score=56.22 Aligned_cols=92 Identities=17% Similarity=0.265 Sum_probs=59.6
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|.......-.... .+ ...+..++++.+|+|+.++-
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~----g~-------~~~~l~ell~~aDvV~l~~P 209 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRL----GL-------RQVACSELFASSDFILLALP 209 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHH----TE-------EECCHHHHHHHCSEEEECCC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhc----Cc-------eeCCHHHHHhhCCEEEEcCC
Confidence 5889999999999999999999998887 577777643111000000 01 11245677888999998875
Q ss_pred -ChHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 170 -NAPSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 170 -~~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
++.++..+++.... .+.-+|+.+.
T Consensus 210 ~t~~t~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 210 LNADTLHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 45677666644332 2334777653
No 307
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=93.50 E-value=0.12 Score=48.10 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=50.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEE-EeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLG-IVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~-lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
.||+|+|+|.+|..+++.+...+- .|. ++|.+.-.. ....+. .+..+++ ++|+|||++....
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~~--------------~gv~v~-~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKAT--------------TPYQQY-QHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC----------------CCSCBC-SCTTTCT-TCSEEEECSCHHH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCcccc--------------CCCcee-CCHHHHh-CCCEEEEeCChHH
Confidence 579999999999999999998765 544 356443210 001111 2334455 8999999986544
Q ss_pred hHHHHHHHHHHcCCcEEEE
Q 013384 173 SRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 173 ~r~~i~~~~~~~~~p~i~~ 191 (444)
....+. .+.++|+|.+
T Consensus 67 ~~~~~~---l~~g~~vVig 82 (243)
T 3qy9_A 67 LFPLLD---EDFHLPLVVA 82 (243)
T ss_dssp HHHHHT---SCCCCCEEEC
T ss_pred HHHHHH---HhcCCceEeC
Confidence 444443 7789999864
No 308
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=92.60 E-value=0.013 Score=53.00 Aligned_cols=72 Identities=14% Similarity=0.209 Sum_probs=46.6
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
+.+.+|.|||+|.+|+.++..|...|. ++.++|.+.- . .++... .+ ... +..+.+.++|+||.|+-.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~-~V~~~~r~~~-~---~~~~~~-g~-----~~~--~~~~~~~~aDvVilav~~ 83 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY-SVVFGSRNPQ-V---SSLLPR-GA-----EVL--CYSEAASRSDVIVLAVHR 83 (201)
Confidence 566789999999999999999999985 5777765421 1 111000 01 111 233456789999988876
Q ss_pred hHhHH
Q 013384 171 APSRY 175 (444)
Q Consensus 171 ~~~r~ 175 (444)
...+.
T Consensus 84 ~~~~~ 88 (201)
T 2yjz_A 84 EHYDF 88 (201)
Confidence 54443
No 309
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.47 E-value=0.19 Score=45.79 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=47.9
Q ss_pred hcCcEEEEC-CCccHHHHHHHHHHcC-CCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEcc
Q 013384 92 LKSSILVIG-AGGLGSPALLYLAACG-VGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDAT 168 (444)
Q Consensus 92 ~~~~VlIvG-~GglGs~ia~~La~~G-vg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~ 168 (444)
..++|+|.| .|++|..+++.|+..| --++.+++.+.-...+ +...+. .+...++. +...++++++|+||.+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~---~~~~~~--~~~~D~~d~~~~~~~~~~~d~vi~~a 77 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK---IGGEAD--VFIGDITDADSINPAFQGIDALVILT 77 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH---TTCCTT--EEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh---cCCCee--EEEecCCCHHHHHHHHcCCCEEEEec
Confidence 457899999 5889999999999995 2467777765322111 222232 33344443 44567788999999875
Q ss_pred C
Q 013384 169 D 169 (444)
Q Consensus 169 D 169 (444)
.
T Consensus 78 ~ 78 (253)
T 1xq6_A 78 S 78 (253)
T ss_dssp C
T ss_pred c
Confidence 4
No 310
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.46 E-value=0.46 Score=49.58 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=63.8
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHH--hhcCCCcEEEEccCCh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNAL--EILSQYEIVVDATDNA 171 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~--~~~~~~DvVi~~~D~~ 171 (444)
.+|+|+|+|-+|..+++.|...|. .+.+||.|.-....+. ..+....+.+... .-++++|.||.++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~--------~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH--------VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS--------CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC--------CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 789999999999999999999996 6899998765433321 2333344433322 2258999999999998
Q ss_pred HhHHHHHHHHHHcCCc
Q 013384 172 PSRYMISDCCVVLGKP 187 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~p 187 (444)
+.-..+...+++.+.+
T Consensus 420 ~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 420 STNIFLTLACRHLHSH 435 (565)
T ss_dssp HHHHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHHHHCCC
Confidence 8888888888888764
No 311
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=93.46 E-value=0.057 Score=52.24 Aligned_cols=72 Identities=10% Similarity=0.132 Sum_probs=50.1
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
....+|.|||+|..|..++.+|... |+.++.++|.+.-....+.. +.. ++.. ..+..+.++++|+|+.|+
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~--~~~~------~~~~~e~v~~aDiVi~at 204 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG--EVRV------CSSVQEAVAGADVIITVT 204 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS--CCEE------CSSHHHHHTTCSEEEECC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC--CeEE------eCCHHHHHhcCCEEEEEe
Confidence 4567899999999999999999987 88899999875432222222 111 1111 134556778899999998
Q ss_pred CC
Q 013384 169 DN 170 (444)
Q Consensus 169 D~ 170 (444)
-.
T Consensus 205 p~ 206 (312)
T 2i99_A 205 LA 206 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 312
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.45 E-value=0.082 Score=49.34 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=46.3
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccC-cceEEEEeecCCcccHHhhcCCCcEEEEccCChHh
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINS-TVHIIEHREALRTSNALEILSQYEIVVDATDNAPS 173 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp-~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~ 173 (444)
+|.|||+|.+|+.++..|+..|. +++++|.+.- ...+.++.. .+. .+..+.+.++|+||.|+-....
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~~~~-~~~~~~~~~~g~~----------~~~~~~~~~aDvvi~~v~~~~~ 69 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRS-PSTIERARTVGVT----------ETSEEDVYSCPVVISAVTPGVA 69 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCC-HHHHHHHHHHTCE----------ECCHHHHHTSSEEEECSCGGGH
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCCccC-HHHHHHHHHCCCc----------CCHHHHHhcCCEEEEECCCHHH
Confidence 69999999999999999999997 6777654211 011111110 111 2234556789999999877644
Q ss_pred HHHHHHH
Q 013384 174 RYMISDC 180 (444)
Q Consensus 174 r~~i~~~ 180 (444)
...+.+.
T Consensus 70 ~~~~~~~ 76 (264)
T 1i36_A 70 LGAARRA 76 (264)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344333
No 313
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.45 E-value=0.023 Score=57.40 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=49.7
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|+|+|.+|..+|+.|...|+ ++.++|.|.....- . ...... ..+..+.+..+|+|+.|+.
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~-A-~~~G~~---------v~~Leeal~~ADIVi~atg 284 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQ-A-CMDGFR---------LVKLNEVIRQVDIVITCTG 284 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHH-H-HHTTCE---------ECCHHHHTTTCSEEEECSS
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHH-H-HHcCCE---------eccHHHHHhcCCEEEECCC
Confidence 5789999999999999999999999998 58888865431100 0 000111 1235677889999999876
Q ss_pred ChH
Q 013384 170 NAP 172 (444)
Q Consensus 170 ~~~ 172 (444)
+..
T Consensus 285 t~~ 287 (435)
T 3gvp_A 285 NKN 287 (435)
T ss_dssp CSC
T ss_pred Ccc
Confidence 543
No 314
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=93.44 E-value=0.17 Score=47.23 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=58.6
Q ss_pred cEEEECC-CccHHHHHHHHHHc--CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCC
Q 013384 95 SILVIGA-GGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDN 170 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~--Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~ 170 (444)
+|+|.|+ |.+|+.+++.|... |. ++.+++.+.-....+ ..+. ++.+...+++ +...+.++++|+||.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~--~~~~--~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQAL--AAQG--ITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHH--HHTT--CEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhh--hcCC--CeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5899996 77999999999987 74 677777643211111 1122 3344445543 4456678899999987643
Q ss_pred -----hHhHHHHHHHHHHcCC-cEEEEccc
Q 013384 171 -----APSRYMISDCCVVLGK-PLVSGAAL 194 (444)
Q Consensus 171 -----~~~r~~i~~~~~~~~~-p~i~~~~~ 194 (444)
...-..+-++|.+.++ .+|+.+..
T Consensus 76 ~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 76 EVGQRAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp ------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 2223345566776665 46666544
No 315
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.43 E-value=0.033 Score=55.44 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=49.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCc-ce-------EEEEeecC-------CcccH
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINST-VH-------IIEHREAL-------RTSNA 154 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~-~~-------v~~~~~~~-------~~~~~ 154 (444)
.+..++|+|+|+|.+|..+++.|.+.|. +++++|...-....+..+.-. +. ...+...+ ..++.
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 3578999999999999999999999998 799988764322111111100 00 00111111 12345
Q ss_pred HhhcCCCcEEEEccCC
Q 013384 155 LEILSQYEIVVDATDN 170 (444)
Q Consensus 155 ~~~~~~~DvVi~~~D~ 170 (444)
.+.+.++|+||.++-.
T Consensus 260 ~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 260 EDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHTTCSEEEECCCC
T ss_pred HHHHhcCCEEEECCCC
Confidence 6778999999988633
No 316
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.13 Score=53.08 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=30.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+.+|.|||+|..|+.+|.+|+..|. +++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 35689999999999999999999997 788888653
No 317
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.41 E-value=0.1 Score=50.44 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=45.9
Q ss_pred cEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCccccccc----cc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNM----HR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~sNl----~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
+|.|+|+|.+|+.++..|+..|. .++.++|.|.-...-+ .. .....++... .+..+ ++++|+||
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t------~d~~~-l~~aDvVi 74 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS------NDYAD-TANSDIVI 74 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE------SCGGG-GTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC------CCHHH-HCCCCEEE
Confidence 79999999999999999999764 4699999864211111 11 1122233322 12233 78999999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
.|+..+
T Consensus 75 iav~~p 80 (310)
T 1guz_A 75 ITAGLP 80 (310)
T ss_dssp ECCSCC
T ss_pred EeCCCC
Confidence 998654
No 318
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.39 E-value=0.059 Score=53.73 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.0
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+..++|+|+|+|++|..+++.+...|. +++++|...
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~ 205 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRA 205 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 5688999999999999999999999998 599988653
No 319
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.38 E-value=0.1 Score=49.63 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=56.0
Q ss_pred hhhcCcEEEECCCc-cHHHHHHHHHHcC-CCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 90 NLLKSSILVIGAGG-LGSPALLYLAACG-VGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 90 ~L~~~~VlIvG~Gg-lGs~ia~~La~~G-vg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
.|++++|+|||.|. +|.++++.|...| -.++++++. ...+..+.++++|+||.+
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~------------------------~t~~L~~~~~~ADIVI~A 210 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHT------------------------GTRDLPALTRQADIVVAA 210 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECT------------------------TCSCHHHHHTTCSEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEEC------------------------chhHHHHHHhhCCEEEEC
Confidence 57899999999997 5999999999884 356777531 125667888999999999
Q ss_pred cCChHhHHHHHHHHHHcCCcEEEEccc
Q 013384 168 TDNAPSRYMISDCCVVLGKPLVSGAAL 194 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~~~~~p~i~~~~~ 194 (444)
+-.+.. |..-..+.+.-+|+.+..
T Consensus 211 vg~p~~---I~~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 211 VGVAHL---LTADMVRPGAAVIDVGVS 234 (281)
T ss_dssp SCCTTC---BCGGGSCTTCEEEECCEE
T ss_pred CCCCcc---cCHHHcCCCcEEEEccCC
Confidence 987652 222223446667776644
No 320
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.36 E-value=0.37 Score=46.33 Aligned_cols=87 Identities=13% Similarity=0.090 Sum_probs=56.3
Q ss_pred CcEEEECCCc-cHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc----------CCCc
Q 013384 94 SSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL----------SQYE 162 (444)
Q Consensus 94 ~~VlIvG~Gg-lGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~----------~~~D 162 (444)
.||.|||+|| +|...+..|...|+.-+.++|.+.-. ....+..+.++ .+. +..+++ .+.|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~-~~~~~~~~~~~--~~~------~~~~ll~~~~~l~~~~~~vD 74 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV-GLVDSFFPEAE--FFT------EPEAFEAYLEDLRDRGEGVD 74 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC-GGGGGTCTTCE--EES------CHHHHHHHHHHHHHTTCCCS
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH-HHHHhhCCCCc--eeC------CHHHHHHHhhhhcccCCCCc
Confidence 5899999965 99999999999988777888876432 11112223322 221 222333 5789
Q ss_pred EEEEccCChHhHHHHHHHHHHcCCcEEE
Q 013384 163 IVVDATDNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 163 vVi~~~D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+|+.||.+ .....+...|.+.|++++.
T Consensus 75 ~V~I~tP~-~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 75 YLSIASPN-HLHYPQIRMALRLGANALS 101 (312)
T ss_dssp EEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCc-hhhHHHHHHHHHCCCeEEE
Confidence 99988876 4555666667777777664
No 321
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=93.33 E-value=0.15 Score=46.30 Aligned_cols=88 Identities=22% Similarity=0.232 Sum_probs=59.5
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCC-CcEEEEccCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQ-YEIVVDATDN 170 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~-~DvVi~~~D~ 170 (444)
..++|+|+|+|+.|..++..|...|..-+.++|+|.-.. ++ ..+.+.. ..+...++.+. .+.++.+..+
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~~-~~----~g~~Vlg-----~~~~~~~~~~~~~~~v~iAIg~ 80 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTRR-AV----LGVPVVG-----DDLALPMLREQGLSRLFVAIGD 80 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC----CB----TTBCEEE-----SGGGHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCcccC-cC----CCeeEEC-----CHHHHHHhhcccccEEEEecCC
Confidence 446899999999999999999998888899999774321 11 1122211 11223333332 4456668889
Q ss_pred hHhHHHHHHHHHHcCCcEE
Q 013384 171 APSRYMISDCCVVLGKPLV 189 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i 189 (444)
...|..+.+.+...+..+.
T Consensus 81 ~~~R~~i~~~l~~~g~~~~ 99 (220)
T 4ea9_A 81 NRLRQKLGRKARDHGFSLV 99 (220)
T ss_dssp HHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHhcCCCcC
Confidence 9999999999988876543
No 322
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.32 E-value=0.068 Score=51.92 Aligned_cols=90 Identities=16% Similarity=0.246 Sum_probs=54.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----ccc----c------ccCcceEEEEeecCC-cccHHhh
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMH----R------INSTVHIIEHREALR-TSNALEI 157 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~----R------lnp~~~v~~~~~~~~-~~~~~~~ 157 (444)
..+|.|||+|-.|+-+|..++.+|+ .++|+|.+.-... ++. + +......+..-..++ ..+..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4579999999999999999999998 6889997542211 111 1 111111000000111 1244566
Q ss_pred cCCCcEEEEccC-ChHhHHHHHHHHHH
Q 013384 158 LSQYEIVVDATD-NAPSRYMISDCCVV 183 (444)
Q Consensus 158 ~~~~DvVi~~~D-~~~~r~~i~~~~~~ 183 (444)
++++|+||.|+- +.+.+..+-...-.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~ 111 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDS 111 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHT
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHH
Confidence 789999999975 56666555444333
No 323
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.29 E-value=0.095 Score=48.39 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=30.3
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~ 42 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADIN 42 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCC
Confidence 577889999985 7799999999999997 57777754
No 324
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.28 E-value=0.13 Score=49.87 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=57.2
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
+.+..+|.|||+|.+|+.++..|+..|. +++++|.+.-....+... .+ .. ..+..+.++++|+||.|+-
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~--g~--~~------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL--GA--TI------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--TC--EE------ESSHHHHHTTCSEEEECCS
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC--CC--Ee------eCCHHHHHhcCCEEEEECC
Confidence 4456789999999999999999999996 688888654321111111 11 11 1244566678888888887
Q ss_pred Ch-HhHHHHH--HHH--HHcCCcEEEEcc
Q 013384 170 NA-PSRYMIS--DCC--VVLGKPLVSGAA 193 (444)
Q Consensus 170 ~~-~~r~~i~--~~~--~~~~~p~i~~~~ 193 (444)
+. ..+..+. ... ...+..+|+.++
T Consensus 97 ~~~~~~~v~~~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 97 NGAVVQDVLFAQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp SHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred CHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence 64 3444443 222 224555666554
No 325
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=93.26 E-value=0.22 Score=53.07 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=64.7
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcc-c-HHhhcCCCcEEEE
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTS-N-ALEILSQYEIVVD 166 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~-~-~~~~~~~~DvVi~ 166 (444)
++.++|+|.|+ |.+|+++++.|+.. |. ++.++|.+.- ++.++.....++.+...++.. . ....++++|+||.
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~---~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih 388 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSD---AISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 388 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCT---TTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCch---hhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence 46678999995 77999999999998 64 6777776432 222221223455565666643 2 3456778999998
Q ss_pred ccCCh---------H--------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 167 ATDNA---------P--------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 167 ~~D~~---------~--------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
+.... . .-..+.++|...+..+|+.++....|
T Consensus 389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg 437 (660)
T 1z7e_A 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437 (660)
T ss_dssp CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcC
Confidence 64321 1 11244566766677788877654443
No 326
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.25 E-value=0.062 Score=51.77 Aligned_cols=80 Identities=18% Similarity=0.248 Sum_probs=49.3
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc--cc---CcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR--IN---STVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R--ln---p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.+|+|+|+|++|+.++..|+ +| ..+++++.+.-...-+.+ ++ +... ....+... .+....+|+||.|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r~~~~~~~l~~~G~~~~~~~~~---~~~~~~~~--~~~~~~~D~vilav 75 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTRRQEQAAAIQSEGIRLYKGGEE---FRADCSAD--TSINSDFDLLVVTV 75 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT-SEEEEECSCHHHHHHHHHHCEEEEETTEE---EEECCEEE--SSCCSCCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHh-cC-CceEEEECCHHHHHHHHhCCceEecCCCe---eccccccc--ccccCCCCEEEEEe
Confidence 57999999999999999999 87 478998875421111111 11 1111 11111111 12346899999999
Q ss_pred CChHhHHHHHHH
Q 013384 169 DNAPSRYMISDC 180 (444)
Q Consensus 169 D~~~~r~~i~~~ 180 (444)
-....+..+...
T Consensus 76 K~~~~~~~l~~l 87 (307)
T 3ego_A 76 KQHQLQSVFSSL 87 (307)
T ss_dssp CGGGHHHHHHHT
T ss_pred CHHHHHHHHHHh
Confidence 877666555444
No 327
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=93.23 E-value=0.07 Score=53.92 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=48.7
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|+|.|.+|..+|+.|...|. ++.++|.+.....-. ...... ..+..++++.+|+|+.++.
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A--~~~G~~---------~~sL~eal~~ADVVilt~g 275 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQA--AMEGYQ---------VLLVEDVVEEAHIFVTTTG 275 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH--HHTTCE---------ECCHHHHTTTCSEEEECSS
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHH--HHhCCe---------ecCHHHHHhhCCEEEECCC
Confidence 5788999999999999999999999997 688888764321000 000111 1245677888999997765
Q ss_pred C
Q 013384 170 N 170 (444)
Q Consensus 170 ~ 170 (444)
+
T Consensus 276 t 276 (436)
T 3h9u_A 276 N 276 (436)
T ss_dssp C
T ss_pred C
Confidence 4
No 328
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.22 E-value=0.12 Score=50.58 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=51.8
Q ss_pred cEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC---
Q 013384 95 SILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN--- 170 (444)
Q Consensus 95 ~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~--- 170 (444)
+|+|.| .|.+|+.+++.|+..|.-++..+|.+ .+.+...++++++|+||.+...
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d~~~l~~~~~~~d~Vih~a~~~~~ 59 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TKEEELESALLKADFIVHLAGVNRP 59 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CCHHHHHHHHHHCSEEEECCCSBCT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CCHHHHHHHhccCCEEEECCcCCCC
Confidence 699999 57799999999999987455555532 2233445556678888876531
Q ss_pred ----------hHhHHHHHHHHHHcCC--cEEEEcccCC
Q 013384 171 ----------APSRYMISDCCVVLGK--PLVSGAALGL 196 (444)
Q Consensus 171 ----------~~~r~~i~~~~~~~~~--p~i~~~~~g~ 196 (444)
...-..+-++|.+.++ .+|..+..+.
T Consensus 60 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~ 97 (369)
T 3st7_A 60 EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA 97 (369)
T ss_dssp TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhh
Confidence 2222345667777664 4776665443
No 329
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=93.18 E-value=0.16 Score=49.37 Aligned_cols=87 Identities=17% Similarity=0.185 Sum_probs=54.6
Q ss_pred CcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccCC
Q 013384 94 SSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATDN 170 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D~ 170 (444)
.+|.|||+|.+|...+..|... |+.-+.++|.+.-....+..... +..+ .+..++++ +.|+|+.|+.+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g---~~~~------~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG---AEAV------ASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT---CEEE------SSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC---Ccee------CCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999886 44444577765422111111111 1222 34456666 78999999866
Q ss_pred hHhHHHHHHHHHHcCCcEEE
Q 013384 171 APSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i~ 190 (444)
.. ...+...|.+.|++++.
T Consensus 76 ~~-h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 76 ST-HVDLITRAVERGIPALC 94 (344)
T ss_dssp GG-HHHHHHHHHHTTCCEEE
T ss_pred hh-hHHHHHHHHHcCCcEEE
Confidence 43 33444556777787764
No 330
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.17 E-value=0.15 Score=48.12 Aligned_cols=99 Identities=14% Similarity=0.050 Sum_probs=60.2
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccC
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D 169 (444)
.++|+|.|+ |++|+.+++.|+..|--++.+++.+.-... ... ..+.+ +.+...+++ +.....++++|+||.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~~~l~~~~~--~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-AKELRLQGA--EVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-HHHHHHTTC--EEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-HHHHHHCCC--EEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 467999997 779999999999988446777776532110 000 12233 344445543 445667889999999875
Q ss_pred ChH---------hHHHHHHHHHHcCCc-EEEEccc
Q 013384 170 NAP---------SRYMISDCCVVLGKP-LVSGAAL 194 (444)
Q Consensus 170 ~~~---------~r~~i~~~~~~~~~p-~i~~~~~ 194 (444)
... .-..+-++|.+.++. +|..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~ 116 (299)
T 2wm3_A 82 YWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE 116 (299)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 321 122445566666654 5554443
No 331
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.15 E-value=0.11 Score=50.32 Aligned_cols=70 Identities=17% Similarity=0.272 Sum_probs=47.0
Q ss_pred CcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCc--cc--cccccc---ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDV--VE--LNNMHR---INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~--V~--~sNl~R---lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
.||.|+|+|.+|.+++..|+..|. .+|.|+|-|. ++ ..+|.. +...+++.. . ..+.++++|+||
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-----~---~~~a~~~aDvVi 77 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-----G---EYSDCKDADLVV 77 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-----C---CGGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-----C---CHHHhCCCCEEE
Confidence 589999999999999999998884 6799999753 11 112211 223344442 1 134478999999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
.+...+
T Consensus 78 i~ag~~ 83 (318)
T 1ez4_A 78 ITAGAP 83 (318)
T ss_dssp ECCCC-
T ss_pred ECCCCC
Confidence 887654
No 332
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=93.13 E-value=0.31 Score=45.98 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=57.6
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc--ccccccccCcceEEEEeecCCc-ccHHhhcC-----CCcEEE
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHRINSTVHIIEHREALRT-SNALEILS-----QYEIVV 165 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~-----~~DvVi 165 (444)
+|+|.|+ |.+|+.+++.|+..|..++.+++...-. ..++.+ +. +...++. +....+++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~----~~---~~~d~~~~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----LN---IADYMDKEDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT----SC---CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCc----ce---eccccccHHHHHHHHhccccCCCcEEE
Confidence 5899997 7799999999999996678888764321 111111 11 1112221 22344454 499999
Q ss_pred EccCC-------hH--------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 166 DATDN-------AP--------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 166 ~~~D~-------~~--------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
.+... +. .-..+.++|...++.+|+.+..+..|
T Consensus 74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 121 (310)
T 1eq2_A 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 121 (310)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGT
T ss_pred ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhC
Confidence 87532 11 11345566777666788776554444
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.13 E-value=0.043 Score=53.77 Aligned_cols=82 Identities=18% Similarity=0.088 Sum_probs=49.2
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecC-C-cccHHhhc--CCCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREAL-R-TSNALEIL--SQYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~-~-~~~~~~~~--~~~DvVi~~ 167 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+.-...-+.++.... .++..- + .+...++. ..+|+||||
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD---IINYKNGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE---EECGGGSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce---EEcCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 4678999999999999999998999989999886432111111122111 111110 0 01122222 269999999
Q ss_pred cCChHhHHH
Q 013384 168 TDNAPSRYM 176 (444)
Q Consensus 168 ~D~~~~r~~ 176 (444)
+....+-..
T Consensus 243 ~g~~~~~~~ 251 (352)
T 3fpc_A 243 GGDVHTFAQ 251 (352)
T ss_dssp SSCTTHHHH
T ss_pred CCChHHHHH
Confidence 988654333
No 334
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=93.12 E-value=0.18 Score=48.81 Aligned_cols=90 Identities=11% Similarity=0.159 Sum_probs=51.9
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcC-CCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEcc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACG-VGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDAT 168 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~G-vg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~ 168 (444)
+..+|.|||+|.+|...+..|...+ +.-+.++|.+.-....+..... + .-...+..+++. +.|+|+.|+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~---~-----~~~~~~~~~ll~~~~~D~V~i~t 75 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYH---L-----PKAYDKLEDMLADESIDVIYVAT 75 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCC---C-----SCEESCHHHHHTCTTCCEEEECS
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcC---C-----CcccCCHHHHhcCCCCCEEEECC
Confidence 3458999999999999999988764 3334466765433222211110 0 000134456665 688998888
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+. ....+...|.+.|++++.
T Consensus 76 p~~-~h~~~~~~al~aGk~Vl~ 96 (329)
T 3evn_A 76 INQ-DHYKVAKAALLAGKHVLV 96 (329)
T ss_dssp CGG-GHHHHHHHHHHTTCEEEE
T ss_pred CcH-HHHHHHHHHHHCCCeEEE
Confidence 763 333444455666666654
No 335
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.07 E-value=0.1 Score=48.76 Aligned_cols=36 Identities=25% Similarity=0.475 Sum_probs=30.0
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~ 49 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIA 49 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 46788899998 56799999999999996 67777654
No 336
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.04 E-value=0.14 Score=47.66 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=31.1
Q ss_pred hhhcCcEEEECCC---ccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGAG---GLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~G---glGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|+++.++|-|++ |+|..+|+.|++.|. ++.++|.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 5889999999974 899999999999997 67887754
No 337
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=93.04 E-value=0.062 Score=54.34 Aligned_cols=123 Identities=13% Similarity=0.178 Sum_probs=77.8
Q ss_pred HHHhhhhccccCCCCCHHH------------------HHhhhcCcEEEECCCccHHHHHHHHHHcCC--CcEEEeeCCcc
Q 013384 69 DMIYRYSRHLLLPSFGVEG------------------QSNLLKSSILVIGAGGLGSPALLYLAACGV--GRLGIVDHDVV 128 (444)
Q Consensus 69 ~~~~ry~Rq~~l~~~g~~~------------------q~~L~~~~VlIvG~GglGs~ia~~La~~Gv--g~i~lvD~D~V 128 (444)
+-.+||...+.+|-|..+- -.+|++.||++.|+|..|..+++.|...|+ ++|.++|..-+
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 4457887765555464322 257999999999999999999999999999 89999998754
Q ss_pred ccc---ccccc--cCcce-E-EEEeecCCcccHHhhcCCCcEEEEccC---ChHhHHHHHHHHHHcCCcEEEEcccC
Q 013384 129 ELN---NMHRI--NSTVH-I-IEHREALRTSNALEILSQYEIVVDATD---NAPSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 129 ~~s---Nl~Rl--np~~~-v-~~~~~~~~~~~~~~~~~~~DvVi~~~D---~~~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
=.. ++.-. |+.-. + +..+.. ...+..+.++..|+.|.++- ..=+...|..++ ..|+|++-+..
T Consensus 257 i~~~R~~l~~~~~~~~k~~~A~~~n~~-~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma---~~PIIFaLSNP 329 (487)
T 3nv9_A 257 LHNGREDIKKDTRFYRKWEICETTNPS-KFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMG---EKPIVFCCANP 329 (487)
T ss_dssp CCTTCHHHHHCGGGHHHHHHHHHSCTT-CCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSC---SSCEEEECCSS
T ss_pred ccCCcchhhhhcccHHHHHHHHhcccc-cCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhc---CCCEEEECCCC
Confidence 322 22100 11000 0 000000 12356778888999998872 223445555553 57999875443
No 338
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.03 E-value=0.057 Score=50.36 Aligned_cols=71 Identities=14% Similarity=0.150 Sum_probs=46.4
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChHh
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPS 173 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~~ 173 (444)
.+|.|||+|.+|..++..|...| ..+.++|.+.-....+.... .+. . ..+..+.+.++|+||.|+-....
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~-g~~-------~-~~~~~~~~~~~D~Vi~~v~~~~~ 73 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGSSLERSKEIAEQL-ALP-------Y-AMSHQDLIDQVDLVILGIKPQLF 73 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECSSHHHHHHHHHHH-TCC-------B-CSSHHHHHHTCSEEEECSCGGGH
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECCCHHHHHHHHHHc-CCE-------e-eCCHHHHHhcCCEEEEEeCcHhH
Confidence 47999999999999999999998 47888886532211111100 111 1 12345566789999999974333
Q ss_pred H
Q 013384 174 R 174 (444)
Q Consensus 174 r 174 (444)
+
T Consensus 74 ~ 74 (259)
T 2ahr_A 74 E 74 (259)
T ss_dssp H
T ss_pred H
Confidence 3
No 339
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.00 E-value=0.074 Score=53.45 Aligned_cols=90 Identities=13% Similarity=0.175 Sum_probs=60.1
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|++++|.|||+|.+|..+|+.|...|. ++..+|...-.. . .. +. . ..+..++++.+|+|+.++
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~-----~-~~--~~----~--~~~l~ell~~aDvV~l~~ 205 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-----L-GN--AT----Q--VQHLSDLLNMSDVVSLHV 205 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-----C-TT--CE----E--CSCHHHHHHHCSEEEECC
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEEcCCchhc-----c-CC--ce----e--cCCHHHHHhcCCEEEEcc
Confidence 46899999999999999999999999996 577777532110 0 00 00 0 124567888999999887
Q ss_pred C-ChHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 169 D-NAPSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 169 D-~~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
. ++.++..+++... +.+.-+|+.+.
T Consensus 206 P~t~~t~~li~~~~l~~mk~ga~lIN~aR 234 (404)
T 1sc6_A 206 PENPSTKNMMGAKEISLMKPGSLLINASR 234 (404)
T ss_dssp CSSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred CCChHHHHHhhHHHHhhcCCCeEEEECCC
Confidence 5 4467766654322 23445777664
No 340
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=92.99 E-value=0.12 Score=50.91 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=51.0
Q ss_pred hhcCcEEEECCCccHHHHHHHHHH-cCCCcEEEeeCCccccccccc-cc--CcceEEEEeecCCcccHHhhcCCCcEEEE
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAA-CGVGRLGIVDHDVVELNNMHR-IN--STVHIIEHREALRTSNALEILSQYEIVVD 166 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~-~Gvg~i~lvD~D~V~~sNl~R-ln--p~~~v~~~~~~~~~~~~~~~~~~~DvVi~ 166 (444)
...++|+|||+|+.|...+..|.. .++.++.++|.+.-....+.. +. +.+.+..+ ++..+.++++|+|+.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~------~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA------SSVAEAVKGVDIITT 200 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC------SSHHHHHTTCSEEEE
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEe------CCHHHHHhcCCEEEE
Confidence 356789999999999999998764 578899999876433222222 21 13333222 345567788999999
Q ss_pred ccCCh
Q 013384 167 ATDNA 171 (444)
Q Consensus 167 ~~D~~ 171 (444)
||-+.
T Consensus 201 aTps~ 205 (350)
T 1x7d_A 201 VTADK 205 (350)
T ss_dssp CCCCS
T ss_pred eccCC
Confidence 99764
No 341
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=92.96 E-value=0.15 Score=48.57 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=51.4
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcC--CCcEEEEcc
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILS--QYEIVVDAT 168 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvVi~~~ 168 (444)
+++|+|.|+ |++|+.+++.|+..| -++.++|.+.-. +. .+...++. +...+.++ ++|+||.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~--------~~----~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGFRRAR--------PK----FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC------------------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEccCCCC--------CC----eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 468999997 779999999999998 467777632111 10 11122221 22334444 489999875
Q ss_pred CCh-----------------HhHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 169 DNA-----------------PSRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 169 D~~-----------------~~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
... ..-..+.++|...+..+|+.+.....|
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~ 115 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFD 115 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcC
Confidence 421 112345667777777788776544333
No 342
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=92.94 E-value=0.055 Score=52.61 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=58.9
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeC-CcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH-DVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~-D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|. +.-.. ... ...+ .. .++..++++.+|+|+.++
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~--~~~-~~g~--~~------~~~l~ell~~aDvVil~~ 210 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSS--DEA-SYQA--TF------HDSLDSLLSVSQFFSLNA 210 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHH--HHH-HHTC--EE------CSSHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcChh--hhh-hcCc--EE------cCCHHHHHhhCCEEEEec
Confidence 6899999999999999999999998885 6778775 43210 000 0011 10 123556778899999887
Q ss_pred CC-hHhHHHHHHHHHH---cCCcEEEEcc
Q 013384 169 DN-APSRYMISDCCVV---LGKPLVSGAA 193 (444)
Q Consensus 169 D~-~~~r~~i~~~~~~---~~~p~i~~~~ 193 (444)
-. +.++..+++.... .+.-+|+.+.
T Consensus 211 p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 211 PSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred cCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 64 4566666543322 2334777654
No 343
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.90 E-value=0.078 Score=51.46 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=46.1
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCcccc----cccccccC---cceEEEEeecCCcccHHhhcCCCcEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVEL----NNMHRINS---TVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~----sNl~Rlnp---~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
..||.|+|+|.+|.+++..|+..|. ++|.++|-|.-.. ..|....+ .+++.. . . .+.++++|+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-----~--~-~~a~~~aDvV 78 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-----G--D-YSDVKDCDVI 78 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---------C-GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-----C--C-HHHhCCCCEE
Confidence 3689999999999999999999885 6899999864111 11111112 222221 1 1 3347899999
Q ss_pred EEccCCh
Q 013384 165 VDATDNA 171 (444)
Q Consensus 165 i~~~D~~ 171 (444)
|.+...+
T Consensus 79 ii~~g~p 85 (318)
T 1y6j_A 79 VVTAGAN 85 (318)
T ss_dssp EECCCC-
T ss_pred EEcCCCC
Confidence 9888765
No 344
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=92.88 E-value=0.59 Score=39.65 Aligned_cols=86 Identities=13% Similarity=0.153 Sum_probs=54.0
Q ss_pred hhh-cCcEEEECC----CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 90 NLL-KSSILVIGA----GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 90 ~L~-~~~VlIvG~----GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
.|. ..+|+|||+ |.+|..++++|...|.. +..+|..... -++... ... .+..++....|+|
T Consensus 9 ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vnp~~~g----------~~i~G~--~~~-~sl~el~~~~Dlv 74 (145)
T 2duw_A 9 ILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPKVAG----------KTLLGQ--QGY-ATLADVPEKVDMV 74 (145)
T ss_dssp HHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSSSTT----------SEETTE--ECC-SSTTTCSSCCSEE
T ss_pred HHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeCCcccc----------cccCCe--ecc-CCHHHcCCCCCEE
Confidence 454 788999999 77999999999999984 6665554320 011001 111 1233444678999
Q ss_pred EEccCChHhHHHHHHHHHHcCCcEEE
Q 013384 165 VDATDNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 165 i~~~D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+-|+-.......+.+ |...++..|.
T Consensus 75 ii~vp~~~v~~v~~~-~~~~g~~~i~ 99 (145)
T 2duw_A 75 DVFRNSEAAWGVAQE-AIAIGAKTLW 99 (145)
T ss_dssp ECCSCSTHHHHHHHH-HHHHTCCEEE
T ss_pred EEEeCHHHHHHHHHH-HHHcCCCEEE
Confidence 999886555555544 5556765443
No 345
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.86 E-value=0.16 Score=48.52 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=30.9
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 75 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSP 75 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 46788899998 56799999999999997 788877653
No 346
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.85 E-value=0.16 Score=50.65 Aligned_cols=95 Identities=11% Similarity=0.048 Sum_probs=56.5
Q ss_pred CcEEEECCCccHHHHHHHHHH-cCCCcEEEee---CC--cccc-ccccc--cc----CcceEEEEeecCC--cccHHhhc
Q 013384 94 SSILVIGAGGLGSPALLYLAA-CGVGRLGIVD---HD--VVEL-NNMHR--IN----STVHIIEHREALR--TSNALEIL 158 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~-~Gvg~i~lvD---~D--~V~~-sNl~R--ln----p~~~v~~~~~~~~--~~~~~~~~ 158 (444)
.+|+|||+|.+|+.++..|+. .|. +++++| .+ .++. -+-+. ++ +...+. ....+. ..+..+.+
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTE-VKSRPKVITKDPEIAI 80 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEE-EEECCSEEESCHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccce-eeccceEEeCCHHHHh
Confidence 379999999999999999988 475 788988 43 2221 01000 11 110011 111221 12344556
Q ss_pred CCCcEEEEccCChHhHHHHHHHHHH--cCCcEEE
Q 013384 159 SQYEIVVDATDNAPSRYMISDCCVV--LGKPLVS 190 (444)
Q Consensus 159 ~~~DvVi~~~D~~~~r~~i~~~~~~--~~~p~i~ 190 (444)
.++|+||.|+-....+..+.+.... .+..+++
T Consensus 81 ~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 81 SGADVVILTVPAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred CCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEE
Confidence 7899999999887777666655422 2445665
No 347
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.84 E-value=0.27 Score=49.93 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=49.6
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccC----cceE--EE--EeecCC-cccHHhhcCCCc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INS----TVHI--IE--HREALR-TSNALEILSQYE 162 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp----~~~v--~~--~~~~~~-~~~~~~~~~~~D 162 (444)
+-+|.|||+|-+|.++|..|+..|. +++++|.|.-....+++ .+| ...- .. ....+. ..+..+.++++|
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~-~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH-EVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 4689999999999999999999995 78888876554444444 222 1100 00 000011 123445668899
Q ss_pred EEEEccCCh
Q 013384 163 IVVDATDNA 171 (444)
Q Consensus 163 vVi~~~D~~ 171 (444)
+||-|+.++
T Consensus 87 vvii~Vptp 95 (446)
T 4a7p_A 87 AVFIAVGTP 95 (446)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999996555
No 348
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=92.83 E-value=0.16 Score=51.94 Aligned_cols=107 Identities=15% Similarity=0.092 Sum_probs=65.7
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcC-C-CcEEEeeCCccccccccc---ccC--------------cceEEEEeecCC
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACG-V-GRLGIVDHDVVELNNMHR---INS--------------TVHIIEHREALR 150 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~G-v-g~i~lvD~D~V~~sNl~R---lnp--------------~~~v~~~~~~~~ 150 (444)
++.++|+|.|+ |++|+++++.|+..+ + .++.+++...-....+.| ... ..+++.+...++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 56789999995 669999999999983 1 477777754332222222 000 134566666654
Q ss_pred c-------ccHHhhcCCCcEEEEccCCh-------------HhHHHHHHHHHHcCC-cEEEEcccCCc
Q 013384 151 T-------SNALEILSQYEIVVDATDNA-------------PSRYMISDCCVVLGK-PLVSGAALGLE 197 (444)
Q Consensus 151 ~-------~~~~~~~~~~DvVi~~~D~~-------------~~r~~i~~~~~~~~~-p~i~~~~~g~~ 197 (444)
. +....+++..|+||.+.... ..-..+.++|...++ ++|+.++.+..
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~ 218 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVG 218 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGG
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhc
Confidence 2 33456677899999886431 122345566766664 67877665433
No 349
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.81 E-value=0.15 Score=47.85 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=30.8
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~ 66 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV 66 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh
Confidence 57888999998 57799999999999996 677777643
No 350
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.80 E-value=0.03 Score=57.63 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=60.3
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|||.|.+|..+|+.|...|. ++.++|.+...... -......+ .+..++++.+|+|+.++.
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~--a~~~G~~~---------~~l~ell~~aDiVi~~~~ 341 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQ--AAMEGYRV---------VTMEYAADKADIFVTATG 341 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHH--HHTTTCEE---------CCHHHHTTTCSEEEECSS
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHH--HHHcCCEe---------CCHHHHHhcCCEEEECCC
Confidence 4889999999999999999999999986 68888876532100 00011111 245678899999999984
Q ss_pred ChHhHHHHHHHH---HHcCCcEEEEcccCC
Q 013384 170 NAPSRYMISDCC---VVLGKPLVSGAALGL 196 (444)
Q Consensus 170 ~~~~r~~i~~~~---~~~~~p~i~~~~~g~ 196 (444)
+. ..|+... .+.+.-+|+.+-.+.
T Consensus 342 t~---~lI~~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 342 NY---HVINHDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp SS---CSBCHHHHHHCCTTEEEEECSSSSC
T ss_pred cc---cccCHHHHhhCCCCcEEEEcCCCcc
Confidence 43 3333222 233445777765544
No 351
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=92.79 E-value=0.13 Score=49.11 Aligned_cols=87 Identities=14% Similarity=0.047 Sum_probs=53.8
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCC-cccHHhhcC--CCcEEEEcc
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALR-TSNALEILS--QYEIVVDAT 168 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~-~~~~~~~~~--~~DvVi~~~ 168 (444)
+.+|+|.|+ |.+|+.+++.|+..|. ++.+++... ...+. .+...++++ ++|+||.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~~------------------~~D~~d~~~~~~~~~~~~~d~vih~a 63 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD------------------ELNLLDSRAVHDFFASERIDQVYLAA 63 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEecCc------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence 468999995 7799999999999886 455554321 01222 233445566 899999876
Q ss_pred CChH------------------hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 169 DNAP------------------SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 169 D~~~------------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
.... .-..+.++|.+.++ .+|+.+..+..|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg 112 (321)
T 1e6u_A 64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 112 (321)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSC
T ss_pred eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcC
Confidence 4221 11244556766665 677776554443
No 352
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=92.78 E-value=0.23 Score=47.84 Aligned_cols=87 Identities=14% Similarity=0.203 Sum_probs=50.0
Q ss_pred cEEEECCCccHHHHHHHHHHcC-CCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc-CCCcEEEEccCChH
Q 013384 95 SILVIGAGGLGSPALLYLAACG-VGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL-SQYEIVVDATDNAP 172 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~G-vg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~-~~~DvVi~~~D~~~ 172 (444)
+|.|||+|.+|...+..|...+ +.-+.++|.+.-....+....... ..+ .+..+++ .+.|+|+.|+.+..
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~--~~~------~~~~~~l~~~~D~V~i~tp~~~ 74 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNI--QLF------DQLEVFFKSSFDLVYIASPNSL 74 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSC--EEE------SCHHHHHTSSCSEEEECSCGGG
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCC--eEe------CCHHHHhCCCCCEEEEeCChHH
Confidence 7999999999999999998864 333456676542221221111111 111 2344555 57888888876532
Q ss_pred hHHHHHHHHHHcCCcEEE
Q 013384 173 SRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 173 ~r~~i~~~~~~~~~p~i~ 190 (444)
...+...|.+.|++++.
T Consensus 75 -h~~~~~~al~~gk~V~~ 91 (325)
T 2ho3_A 75 -HFAQAKAALSAGKHVIL 91 (325)
T ss_dssp -HHHHHHHHHHTTCEEEE
T ss_pred -HHHHHHHHHHcCCcEEE
Confidence 33333345566666554
No 353
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.78 E-value=0.078 Score=52.77 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=58.7
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|...-... ......+..++++.+|+|+.++-
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~---------------~~~~~~sl~ell~~aDiV~l~~P 179 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGI-RTLLCDPPRAARG---------------DEGDFRTLDELVQEADVLTFHTP 179 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECHHHHHTT---------------CCSCBCCHHHHHHHCSEEEECCC
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCChHHhc---------------cCcccCCHHHHHhhCCEEEEcCc
Confidence 5889999999999999999999999997 5667664221100 01122356778889999998875
Q ss_pred -ChH----hHHHHHHHHHH---cCCcEEEEc
Q 013384 170 -NAP----SRYMISDCCVV---LGKPLVSGA 192 (444)
Q Consensus 170 -~~~----~r~~i~~~~~~---~~~p~i~~~ 192 (444)
+.. ++..++..... .+.-+|+.+
T Consensus 180 lt~~g~~~T~~li~~~~l~~mk~gailIN~a 210 (381)
T 3oet_A 180 LYKDGPYKTLHLADETLIRRLKPGAILINAC 210 (381)
T ss_dssp CCCSSTTCCTTSBCHHHHHHSCTTEEEEECS
T ss_pred CCccccccchhhcCHHHHhcCCCCcEEEECC
Confidence 334 66666544332 244477765
No 354
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=92.76 E-value=0.12 Score=48.41 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=30.5
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~ 44 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRRE 44 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 467888999984 7799999999999996 677777653
No 355
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=92.76 E-value=0.051 Score=55.71 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=61.3
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|||.|.+|..+|+.|...|. ++.++|.+....... ....+.+ .+..++++.+|+|+.++.
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a--~~~g~~~---------~~l~ell~~aDiVi~~~~ 321 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQA--VMEGFNV---------VTLDEIVDKGDFFITCTG 321 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHH--HTTTCEE---------CCHHHHTTTCSEEEECCS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHH--HHcCCEe---------cCHHHHHhcCCEEEECCC
Confidence 5889999999999999999999999997 788888765421000 0111111 245677899999999974
Q ss_pred ChHhHHHHHHHH---HHcCCcEEEEcccCC
Q 013384 170 NAPSRYMISDCC---VVLGKPLVSGAALGL 196 (444)
Q Consensus 170 ~~~~r~~i~~~~---~~~~~p~i~~~~~g~ 196 (444)
+. ..|+... .+.+.-+|+.+-.+.
T Consensus 322 t~---~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 322 NV---DVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp SS---SSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred hh---hhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 43 3333222 234556788765544
No 356
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=92.75 E-value=0.38 Score=45.68 Aligned_cols=72 Identities=11% Similarity=0.028 Sum_probs=45.6
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCC--CcEE
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQ--YEIV 164 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~--~DvV 164 (444)
++-+.++|+|.| .|++|+.+++.|+..|. ++.++|.+.-. .. + .++.+...++. +...++++. .|+|
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l----~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---P----NVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---T----TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---c----eeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 355678899998 56799999999999995 77777764322 11 1 45555555554 334455554 8999
Q ss_pred EEccC
Q 013384 165 VDATD 169 (444)
Q Consensus 165 i~~~D 169 (444)
|.+..
T Consensus 79 ih~A~ 83 (321)
T 2pk3_A 79 FHLAA 83 (321)
T ss_dssp EECCS
T ss_pred EEcCc
Confidence 98754
No 357
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.64 E-value=0.077 Score=51.48 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=50.0
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc----ccc--ccccc----ccCcceEEEEeecCCcccHHhhcCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV----VEL--NNMHR----INSTVHIIEHREALRTSNALEILSQ 160 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~----V~~--sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~ 160 (444)
.+..+|.|+|+|.+|+.+|..|+..|+++++++|-+. .+- .++.. .....++.... ..+-+++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~-------d~~a~~~ 78 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS-------DYADTAD 78 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES-------CGGGGTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC-------CHHHhCC
Confidence 3457899999999999999999999998999999872 111 01111 11223333321 1345689
Q ss_pred CcEEEEccCCh
Q 013384 161 YEIVVDATDNA 171 (444)
Q Consensus 161 ~DvVi~~~D~~ 171 (444)
+|+||.+...+
T Consensus 79 aDvVIiaag~p 89 (315)
T 3tl2_A 79 SDVVVITAGIA 89 (315)
T ss_dssp CSEEEECCSCC
T ss_pred CCEEEEeCCCC
Confidence 99999887544
No 358
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.63 E-value=0.14 Score=52.32 Aligned_cols=95 Identities=12% Similarity=0.166 Sum_probs=69.9
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccH--HhhcCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA--LEILSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~--~~~~~~~DvVi~~~D~ 170 (444)
.++|+|+|.|-+|..+|+.|-. + .++.+|+.|.-....+....|.+. ......++.+. .+-+.++|++|.+|++
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d~~r~~~la~~l~~~~--Vi~GD~td~~~L~ee~i~~~D~~ia~T~~ 310 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERNLQRAEKLSEELENTI--VFCGDAADQELLTEENIDQVDVFIALTNE 310 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESCHHHHHHHHHHCTTSE--EEESCTTCHHHHHHTTGGGCSEEEECCSC
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c-CceEEEecCHHHHHHHHHHCCCce--EEeccccchhhHhhcCchhhcEEEEcccC
Confidence 4689999999999999999854 3 579999887765555555334433 33344443322 2336889999999999
Q ss_pred hHhHHHHHHHHHHcCCcEEEE
Q 013384 171 APSRYMISDCCVVLGKPLVSG 191 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i~~ 191 (444)
-++-....-+|++.|.+-+-+
T Consensus 311 De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 311 DETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHHHcCCccccc
Confidence 999999999999999885543
No 359
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.62 E-value=0.14 Score=49.61 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=47.2
Q ss_pred cEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCcccc----ccccc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVEL----NNMHR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~----sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
||.|+|+|.+|+.++..|+..|+ .++.++|-+.-.. -+|.. ....+++... +..+.++++|+||
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-------~~~~a~~~aDvVi 74 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-------NDYGPTEDSDVCI 74 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-------SSSGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-------CCHHHhCCCCEEE
Confidence 69999999999999999999997 5899999765111 02221 1223444432 1134568999999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
-+...+
T Consensus 75 i~ag~~ 80 (314)
T 3nep_X 75 ITAGLP 80 (314)
T ss_dssp ECCCC-
T ss_pred ECCCCC
Confidence 887655
No 360
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.62 E-value=0.19 Score=51.58 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=28.9
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+|.|||+|.+|+.++.+|+..|. ++.++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 479999999999999999999997 68888865
No 361
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.61 E-value=0.084 Score=51.41 Aligned_cols=75 Identities=11% Similarity=0.167 Sum_probs=50.8
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccc----ccccccc----CcceEEEEeecCCcccHHhhcCCC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVEL----NNMHRIN----STVHIIEHREALRTSNALEILSQY 161 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~----sNl~Rln----p~~~v~~~~~~~~~~~~~~~~~~~ 161 (444)
+++..||.|+|+|.+|+.++..|+..|.+++.|+|-+.-.. .+|...+ ...++.... + .+.++++
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~------d-~~a~~~a 76 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN------D-YAAIEGA 76 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES------S-GGGGTTC
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC------C-HHHHCCC
Confidence 35667999999999999999999999988999999765211 1232221 233443321 1 2456899
Q ss_pred cEEEEccCCh
Q 013384 162 EIVVDATDNA 171 (444)
Q Consensus 162 DvVi~~~D~~ 171 (444)
|+||.+...+
T Consensus 77 DiVIiaag~p 86 (324)
T 3gvi_A 77 DVVIVTAGVP 86 (324)
T ss_dssp SEEEECCSCC
T ss_pred CEEEEccCcC
Confidence 9999887543
No 362
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=92.61 E-value=0.24 Score=46.52 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=31.8
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVV 128 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V 128 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+.-
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~ 41 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAV 41 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccch
Confidence 46788999998 56799999999999997 7888887654
No 363
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.60 E-value=0.092 Score=50.23 Aligned_cols=83 Identities=13% Similarity=0.178 Sum_probs=50.5
Q ss_pred cEEEECCCccHHHHHHHHHHc-----CCCcEEEeeCCccccccccccc--CcceEEE-----EeecCCcccHHhhcCCCc
Q 013384 95 SILVIGAGGLGSPALLYLAAC-----GVGRLGIVDHDVVELNNMHRIN--STVHIIE-----HREALRTSNALEILSQYE 162 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~-----Gvg~i~lvD~D~V~~sNl~Rln--p~~~v~~-----~~~~~~~~~~~~~~~~~D 162 (444)
+|+|||+|.+|+.++..|+.+ |..+++++|. . ..+.+++ ..+.+.. ....+...+..+....+|
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~---~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-G---AHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-H---HHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-H---HHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 699999999999999999998 7237888875 2 1111111 1222111 111111111223457899
Q ss_pred EEEEccCChHhHHHHHHHH
Q 013384 163 IVVDATDNAPSRYMISDCC 181 (444)
Q Consensus 163 vVi~~~D~~~~r~~i~~~~ 181 (444)
+||.|+-....+..+....
T Consensus 86 ~vil~vk~~~~~~v~~~i~ 104 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIR 104 (317)
T ss_dssp EEEECCSSSCHHHHHHHHG
T ss_pred EEEEecCcccHHHHHHHHH
Confidence 9999998877666665543
No 364
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=92.57 E-value=0.14 Score=47.52 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=58.6
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEccCC-
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDATDN- 170 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~D~- 170 (444)
++|+|.|+ |++|+.+++.|+..| -++.++|.+.-. . ..+ .++.+...++. +...++++++|+||.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~--~---~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 74 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIVDLG--A---AEA--HEEIVACDLADAQAVHDLVKDCDGIIHLGGVS 74 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSSCCC--C---CCT--TEEECCCCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCCCcc--c---cCC--CccEEEccCCCHHHHHHHHcCCCEEEECCcCC
Confidence 57999997 889999999999988 467777654321 1 111 23444445543 3456677899999988532
Q ss_pred ----hH--------hHHHHHHHHHHcCC-cEEEEcccC
Q 013384 171 ----AP--------SRYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 171 ----~~--------~r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
.. .-..+-++|...+. .+|+.+...
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 112 (267)
T 3ay3_A 75 VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNH 112 (267)
T ss_dssp SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHH
Confidence 11 11345556666654 466655443
No 365
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.56 E-value=0.28 Score=46.96 Aligned_cols=108 Identities=12% Similarity=0.055 Sum_probs=61.6
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccc--cccccccCcceEEEEeecCCc-ccHHhhcC--CCcE
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVEL--NNMHRINSTVHIIEHREALRT-SNALEILS--QYEI 163 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~--sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~Dv 163 (444)
+=.+.+|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-.. ..+..+...-.++.+...+.. +...++++ .+|+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 446788999985 7799999999999995 777777643211 111112112245555555553 33445555 4699
Q ss_pred EEEccCC---------hHh--------HHHHHHHHHHcC--CcEEEEcccCCcc
Q 013384 164 VVDATDN---------APS--------RYMISDCCVVLG--KPLVSGAALGLEG 198 (444)
Q Consensus 164 Vi~~~D~---------~~~--------r~~i~~~~~~~~--~p~i~~~~~g~~G 198 (444)
||.+... +.. -..+.++|...+ ..+|+.+.....|
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g 143 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 143 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhC
Confidence 9987542 111 123556676665 4677766544443
No 366
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.54 E-value=0.11 Score=48.24 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=30.4
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~ 41 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSK 41 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 46778899998 47799999999999997 788877654
No 367
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.53 E-value=0.063 Score=50.60 Aligned_cols=36 Identities=28% Similarity=0.285 Sum_probs=29.9
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 61 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATT 61 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57888899988 57799999999999997 67776654
No 368
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.52 E-value=0.098 Score=51.67 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=31.6
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 217 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQA 217 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 467899999999999999999999999999987643
No 369
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.50 E-value=0.37 Score=40.10 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=57.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccC
Q 013384 93 KSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D 169 (444)
..+|+|+|+|+.|..++..|... |..-+.++|.|.-. .++.-..+.+ +. .++..++++ ..|.|+.|+.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~---~g~~i~g~pV--~g----~~~l~~~~~~~~id~viia~~ 74 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKK---HKTTMQGITI--YR----PKYLERLIKKHCISTVLLAVP 74 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGG---TTCEETTEEE--EC----GGGHHHHHHHHTCCEEEECCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCccc---CCCEecCeEE--EC----HHHHHHHHHHCCCCEEEEeCC
Confidence 46799999999999999999875 66667788876421 1111112222 21 233444443 5677887876
Q ss_pred C--hHhHHHHHHHHHHcCCcEEE
Q 013384 170 N--APSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 170 ~--~~~r~~i~~~~~~~~~p~i~ 190 (444)
+ ...+..+.+.|...++.+..
T Consensus 75 ~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 75 SASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEE
Confidence 4 34566777888888887664
No 370
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.50 E-value=0.094 Score=48.99 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=30.9
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~ 44 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRST 44 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 57788999998 57799999999999997 777877543
No 371
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.44 E-value=0.11 Score=51.98 Aligned_cols=75 Identities=16% Similarity=0.253 Sum_probs=47.0
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCccc----HHhhc--CCCcEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSN----ALEIL--SQYEIVV 165 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~----~~~~~--~~~DvVi 165 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+.-...-+.++.... .++ ...++ ..++. ..+|+||
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~---vi~--~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH---VID--PTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---EEC--TTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---EEc--CCCCCHHHHHHHHhCCCCCCEEE
Confidence 4568999999999999999999999989998875432111111122111 111 11111 22222 3699999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
||+...
T Consensus 288 d~~g~~ 293 (404)
T 3ip1_A 288 EATGVP 293 (404)
T ss_dssp ECSSCH
T ss_pred ECCCCc
Confidence 999987
No 372
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.44 E-value=0.21 Score=48.31 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=48.1
Q ss_pred cEEEECC-CccHHHHHHHHHHcCC-CcEEEeeCCcccc--cccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCC
Q 013384 95 SILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVVEL--NNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDN 170 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gv-g~i~lvD~D~V~~--sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~ 170 (444)
||+|+|+ |.+|..++..|+..|. .++.++|-|.... -+|.......++..+. ...+..+.++++|+||.+...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~---~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL---GPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE---SGGGHHHHHTTCSEEEECCSC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEec---CCCCHHHHhCCCCEEEECCCc
Confidence 7999998 9999999999998875 6799999886110 0222222222333321 112344567899999988654
Q ss_pred h
Q 013384 171 A 171 (444)
Q Consensus 171 ~ 171 (444)
+
T Consensus 79 ~ 79 (314)
T 1mld_A 79 P 79 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 373
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=92.43 E-value=0.13 Score=47.95 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=49.1
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-c-cCcceEEEEeecCCccc-HHh-------hc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-I-NSTVHIIEHREALRTSN-ALE-------IL 158 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-l-np~~~v~~~~~~~~~~~-~~~-------~~ 158 (444)
.+++++|+|.| .||+|..+++.|+..|. ++.++|.+.-....+.. + ....++..+...++... ... .+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46788999998 57899999999999997 58888765433222211 1 11234555555555321 222 23
Q ss_pred CCCcEEEEccC
Q 013384 159 SQYEIVVDATD 169 (444)
Q Consensus 159 ~~~DvVi~~~D 169 (444)
...|+||.+..
T Consensus 105 g~id~lv~~Ag 115 (262)
T 3rkr_A 105 GRCDVLVNNAG 115 (262)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887654
No 374
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.42 E-value=0.33 Score=43.05 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=55.0
Q ss_pred hcCcEEEEC-CCccHHHHHHHHHHcCC-CcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCCCcEEEEcc
Q 013384 92 LKSSILVIG-AGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQYEIVVDAT 168 (444)
Q Consensus 92 ~~~~VlIvG-~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~ 168 (444)
..++|+|.| .|++|..+++.|+..|. .++.+++.+.-. ..+ .++.+...++. +...+.+ +|+||.+.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~~~--~~~~~~~D~~~~~~~~~~~--~d~vi~~a 73 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EHP--RLDNPVGPLAELLPQLDGS--IDTAFCCL 73 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CCT--TEECCBSCHHHHGGGCCSC--CSEEEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------cCC--CceEEeccccCHHHHHHhh--hcEEEECe
Confidence 346899999 67799999999999986 478887754322 011 22222222222 2222333 89999887
Q ss_pred CChH---------------hHHHHHHHHHHcCCc-EEEEccc
Q 013384 169 DNAP---------------SRYMISDCCVVLGKP-LVSGAAL 194 (444)
Q Consensus 169 D~~~---------------~r~~i~~~~~~~~~p-~i~~~~~ 194 (444)
.... .-..+.++|.+.+.. +|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 115 (215)
T 2a35_A 74 GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSAL 115 (215)
T ss_dssp CCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 5321 112445566666654 6665543
No 375
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.42 E-value=0.64 Score=45.33 Aligned_cols=99 Identities=16% Similarity=0.174 Sum_probs=61.4
Q ss_pred cCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeec-CCc-ccHHhhcCCCcEEEEccC
Q 013384 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREA-LRT-SNALEILSQYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~-~~~-~~~~~~~~~~DvVi~~~D 169 (444)
.++|+|.|+ |.+|+.+++.|+..|. ++.+++.+.-... ...+...-.++.+... +++ +.....++++|+||.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~-~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLI-AEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHH-HHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhh-HHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence 578999995 7799999999999884 6777765432110 0111111134455555 543 345667889999997654
Q ss_pred Ch------HhHHHHHHHHHHcC-C-cEEEEccc
Q 013384 170 NA------PSRYMISDCCVVLG-K-PLVSGAAL 194 (444)
Q Consensus 170 ~~------~~r~~i~~~~~~~~-~-p~i~~~~~ 194 (444)
.. .. ..+.++|.+.+ + .+|+.+..
T Consensus 83 ~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 83 SQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp STTSCHHHHH-HHHHHHHHHHSCCSEEEEEECC
T ss_pred CCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCc
Confidence 32 23 45666777777 4 57766543
No 376
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.40 E-value=0.17 Score=47.83 Aligned_cols=37 Identities=32% Similarity=0.482 Sum_probs=29.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.++++.|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 62 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGRTR 62 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 46788899998 56799999999999997 677777653
No 377
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.36 E-value=0.15 Score=46.82 Aligned_cols=36 Identities=22% Similarity=0.507 Sum_probs=29.7
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .|++|..+++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCC
Confidence 46778899998 57799999999999996 57777654
No 378
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.29 E-value=0.15 Score=50.08 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=60.0
Q ss_pred CcEEEECCC-ccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCChH
Q 013384 94 SSILVIGAG-GLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAP 172 (444)
Q Consensus 94 ~~VlIvG~G-glGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~~ 172 (444)
.+|.|||+. -+|.++++.|...-.-+|..+....-.-.-+....|+.. .+..+.+-+..+++.++|+||.|+..-.
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~---~~l~~~~~~~~~~~~~~Dvvf~alp~~~ 90 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL---ENSILSEFDPEKVSKNCDVLFTALPAGA 90 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC---CCCBCBCCCHHHHHHHCSEEEECCSTTH
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc---cCceEEeCCHHHhhcCCCEEEECCCcHH
Confidence 479999964 489999999998876677776543211111111334333 1222222233444578999999999888
Q ss_pred hHHHHHHHHHHcCCcEEEEcc
Q 013384 173 SRYMISDCCVVLGKPLVSGAA 193 (444)
Q Consensus 173 ~r~~i~~~~~~~~~p~i~~~~ 193 (444)
++.+...+ .+..+|+.++
T Consensus 91 s~~~~~~~---~g~~VIDlSs 108 (351)
T 1vkn_A 91 SYDLVREL---KGVKIIDLGA 108 (351)
T ss_dssp HHHHHTTC---CSCEEEESSS
T ss_pred HHHHHHHh---CCCEEEECCh
Confidence 87766655 7888998663
No 379
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=92.24 E-value=0.16 Score=47.12 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=30.1
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57788899998 57799999999999997 57777754
No 380
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=92.23 E-value=0.11 Score=48.84 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=30.5
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~ 60 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTR 60 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 468889999998 56799999999999996 57776653
No 381
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.23 E-value=0.13 Score=47.39 Aligned_cols=36 Identities=33% Similarity=0.434 Sum_probs=30.0
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~ 46 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLD 46 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 57799999999999996 67777754
No 382
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.23 E-value=0.094 Score=51.41 Aligned_cols=35 Identities=34% Similarity=0.509 Sum_probs=30.6
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|.+++..+|.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 205 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 205 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999998888999889998854
No 383
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.22 E-value=0.14 Score=49.88 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=47.5
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCcccc----ccccc---ccCcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVEL----NNMHR---INSTVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~----sNl~R---lnp~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
..||.|+|+|.+|.+++..|+..|. .+|.|+|-|.-.. .+|.. +...+++.. . ..+.++++|+|
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-----~---~~~a~~~aDvV 80 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-----A---EYSDAKDADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-----C---CGGGGGGCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-----C---CHHHhCCCCEE
Confidence 3689999999999999999998884 6799999753111 11111 223344442 1 13346899999
Q ss_pred EEccCCh
Q 013384 165 VDATDNA 171 (444)
Q Consensus 165 i~~~D~~ 171 (444)
|.+...+
T Consensus 81 ii~ag~~ 87 (326)
T 2zqz_A 81 VITAGAP 87 (326)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9887654
No 384
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=92.21 E-value=0.29 Score=47.97 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=46.3
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc--ccccccccC-----cc-eEEEEeecCCc-ccHHhhcC--CC
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHRINS-----TV-HIIEHREALRT-SNALEILS--QY 161 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~Rlnp-----~~-~v~~~~~~~~~-~~~~~~~~--~~ 161 (444)
++|+|.|+ |++|+.+++.|+..|. ++.++|.+.-. ...+..+.. .. .++.+...+.. +...++++ .+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 57999996 7799999999999995 77777764321 111221111 01 34555555554 23344555 46
Q ss_pred cEEEEccC
Q 013384 162 EIVVDATD 169 (444)
Q Consensus 162 DvVi~~~D 169 (444)
|+||.+..
T Consensus 108 d~Vih~A~ 115 (381)
T 1n7h_A 108 DEVYNLAA 115 (381)
T ss_dssp SEEEECCS
T ss_pred CEEEECCc
Confidence 99998864
No 385
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=92.19 E-value=0.5 Score=46.08 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=46.2
Q ss_pred CcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccc--cccccccc------CcceEEEEeecCCc-ccHHhhcC--CC
Q 013384 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVE--LNNMHRIN------STVHIIEHREALRT-SNALEILS--QY 161 (444)
Q Consensus 94 ~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~--~sNl~Rln------p~~~v~~~~~~~~~-~~~~~~~~--~~ 161 (444)
++|+|.|+ |++|+.+++.|+..|. ++.++|.+.-. ...+..+. ....++.+...+.. +...++++ ..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 57999994 7799999999999995 77777765321 11122111 12245555555554 33444555 36
Q ss_pred cEEEEccC
Q 013384 162 EIVVDATD 169 (444)
Q Consensus 162 DvVi~~~D 169 (444)
|+||.+..
T Consensus 104 d~vih~A~ 111 (375)
T 1t2a_A 104 TEIYNLGA 111 (375)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99998864
No 386
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.18 E-value=0.17 Score=49.08 Aligned_cols=87 Identities=9% Similarity=-0.001 Sum_probs=61.1
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccH-Hhh-cCCCcEEEEccCC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA-LEI-LSQYEIVVDATDN 170 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~-~~~-~~~~DvVi~~~D~ 170 (444)
..+|+|+|+|.+|..+++.|...|. +.++|.|.-... +.. . .+..+....+.... .+. ++++|.|+.++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~~~~-~~~--~--~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKK-VLR--S--GANFVHGDPTRVSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGGHHH-HHH--T--TCEEEESCTTSHHHHHHTCSTTEEEEEECCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChhhhh-HHh--C--CcEEEEeCCCCHHHHHhcChhhccEEEEcCCc
Confidence 4589999999999999999999987 999998764333 221 1 23344444443332 223 6789999999998
Q ss_pred hHhHHHHHHHHHHcCC
Q 013384 171 APSRYMISDCCVVLGK 186 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~ 186 (444)
.+.-..+...+++.+.
T Consensus 188 d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 188 DSETIHCILGIRKIDE 203 (336)
T ss_dssp HHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHHHHHHCC
Confidence 7776677777777654
No 387
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.16 E-value=0.16 Score=47.34 Aligned_cols=36 Identities=22% Similarity=0.453 Sum_probs=30.0
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 41 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD 41 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 56799999999999997 57777754
No 388
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=92.16 E-value=0.17 Score=47.76 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=30.3
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57888999998 57799999999999997 57777654
No 389
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=92.10 E-value=0.18 Score=47.72 Aligned_cols=77 Identities=16% Similarity=0.250 Sum_probs=50.2
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcceEEEEeecCCc-ccHHhhc---CCCc
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRT-SNALEIL---SQYE 162 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~-~~~~~~~---~~~D 162 (444)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.+.-....+.. + ..++..+...++. +....++ ...|
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 457889999998 57799999999999996 78888765433222222 2 2245555555554 2233333 3568
Q ss_pred EEEEcc
Q 013384 163 IVVDAT 168 (444)
Q Consensus 163 vVi~~~ 168 (444)
+||.+.
T Consensus 89 ~lv~nA 94 (291)
T 3rd5_A 89 VLINNA 94 (291)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 888764
No 390
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.08 E-value=0.19 Score=46.91 Aligned_cols=36 Identities=33% Similarity=0.585 Sum_probs=29.7
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 46 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVS 46 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 56799999999999996 67777654
No 391
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=92.06 E-value=0.2 Score=45.82 Aligned_cols=77 Identities=13% Similarity=0.206 Sum_probs=48.0
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCC------cEEEeeCCccccccccc-c-cCcceEEEEeecCCcc-cHHhh-----
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVG------RLGIVDHDVVELNNMHR-I-NSTVHIIEHREALRTS-NALEI----- 157 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg------~i~lvD~D~V~~sNl~R-l-np~~~v~~~~~~~~~~-~~~~~----- 157 (444)
+++|+|.| .||+|.++++.|+..|.. ++.++|.+.-....+.. + ....++..+...++.. ....+
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46789998 577999999999999986 78888865422222111 1 1233555666565542 22222
Q ss_pred --cCCCcEEEEccC
Q 013384 158 --LSQYEIVVDATD 169 (444)
Q Consensus 158 --~~~~DvVi~~~D 169 (444)
+...|+||.+..
T Consensus 82 ~~~g~id~li~~Ag 95 (244)
T 2bd0_A 82 ERYGHIDCLVNNAG 95 (244)
T ss_dssp HHTSCCSEEEECCC
T ss_pred HhCCCCCEEEEcCC
Confidence 246888887653
No 392
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.05 E-value=0.26 Score=50.51 Aligned_cols=91 Identities=12% Similarity=0.142 Sum_probs=52.8
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccc-c--Cc-ceEEEEeecCCcccHHhhcC---CCcEEEEc
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRI-N--ST-VHIIEHREALRTSNALEILS---QYEIVVDA 167 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rl-n--p~-~~v~~~~~~~~~~~~~~~~~---~~DvVi~~ 167 (444)
+|.|||+|.+|+.++.+|+..|. +++++|.+.-....+... . |. ..+.. ..+..+++. ++|+||.|
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~------~~~~~e~v~~l~~aDvVila 75 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANASAPFAGNLKA------FETMEAFAASLKKPRKALIL 75 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTTTSTTGGGEEE------CSCHHHHHHHBCSSCEEEEC
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCCCCCCCeEE------ECCHHHHHhcccCCCEEEEe
Confidence 79999999999999999999997 688988753221111110 0 00 01111 112233333 57888888
Q ss_pred cCCh-HhHHHHHHHHH--HcCCcEEEEc
Q 013384 168 TDNA-PSRYMISDCCV--VLGKPLVSGA 192 (444)
Q Consensus 168 ~D~~-~~r~~i~~~~~--~~~~p~i~~~ 192 (444)
+-.. ..+..+.+... ..+..+|+.+
T Consensus 76 Vp~~~~v~~vl~~l~~~l~~g~iIId~s 103 (478)
T 1pgj_A 76 VQAGAATDSTIEQLKKVFEKGDILVDTG 103 (478)
T ss_dssp CCCSHHHHHHHHHHHHHCCTTCEEEECC
T ss_pred cCChHHHHHHHHHHHhhCCCCCEEEECC
Confidence 7664 45555554432 2345566543
No 393
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.05 E-value=0.15 Score=47.43 Aligned_cols=39 Identities=23% Similarity=0.146 Sum_probs=30.1
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCC--CcEEEeeCCc
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGV--GRLGIVDHDV 127 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ 127 (444)
..+++++|+|.| .|++|.++++.|+..|. .++.++|.+.
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 356678899998 56799999999999995 5888887653
No 394
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.04 E-value=0.11 Score=50.67 Aligned_cols=72 Identities=24% Similarity=0.326 Sum_probs=48.9
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccc----cccccc----CcceEEEEeecCCcccHHhhcCCCcE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELN----NMHRIN----STVHIIEHREALRTSNALEILSQYEI 163 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~s----Nl~Rln----p~~~v~~~~~~~~~~~~~~~~~~~Dv 163 (444)
...+|.|+|+|.+|+.+|..|+..|...+.++|-|.-... ++.+.+ ...++... .+. +.++++|+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t------~d~-~al~~aD~ 85 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE------NNY-EYLQNSDV 85 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE------SCG-GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC------CCH-HHHCCCCE
Confidence 3468999999999999999999999855999998742111 222211 22333332 122 45689999
Q ss_pred EEEccCC
Q 013384 164 VVDATDN 170 (444)
Q Consensus 164 Vi~~~D~ 170 (444)
||.+...
T Consensus 86 VI~avg~ 92 (328)
T 2hjr_A 86 VIITAGV 92 (328)
T ss_dssp EEECCSC
T ss_pred EEEcCCC
Confidence 9999743
No 395
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.04 E-value=0.1 Score=51.24 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=29.6
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
-||+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 489999999999999999999998 688988653
No 396
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.01 E-value=0.19 Score=46.82 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=30.1
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAART 44 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCC
Confidence 57888999998 56799999999999997 57777654
No 397
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.01 E-value=0.11 Score=50.34 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=46.8
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccc----ccccc----CcceEEEEeecCCcccHHhhcCCCcEE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNN----MHRIN----STVHIIEHREALRTSNALEILSQYEIV 164 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sN----l~Rln----p~~~v~~~~~~~~~~~~~~~~~~~DvV 164 (444)
..+|.|||+|.+|+.++..|+..|...+.++|.+.-.... +.+.+ ...++... .+. +.++++|+|
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t------~d~-~a~~~aDiV 76 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT------DDY-ADISGSDVV 76 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE------SCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC------CCH-HHhCCCCEE
Confidence 3589999999999999999999998679999986411111 11111 12223222 122 456899999
Q ss_pred EEccC
Q 013384 165 VDATD 169 (444)
Q Consensus 165 i~~~D 169 (444)
|.|+.
T Consensus 77 i~avg 81 (317)
T 2ewd_A 77 IITAS 81 (317)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 99983
No 398
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=92.01 E-value=0.25 Score=47.97 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=53.3
Q ss_pred cCcEEEECCCccHHHHHHHHH-H-cCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEcc
Q 013384 93 KSSILVIGAGGLGSPALLYLA-A-CGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDAT 168 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La-~-~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~ 168 (444)
..+|.|||+|.+|...+..|. . .|+.-+.++|.+.-....+..... +. ..+ .+..++++ +.|+|+.|+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g-~~-~~~------~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG-VE-TTY------TNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC-CS-EEE------SCHHHHHTTSCCSEEEECS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC-CC-ccc------CCHHHHhcCCCCCEEEEeC
Confidence 357999999999999999987 4 355445677765432222111111 10 111 23455554 689999998
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+.... .+...|.+.|++++.
T Consensus 80 p~~~h~-~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 80 PTPFHP-EMTIYAMNAGLNVFC 100 (346)
T ss_dssp CGGGHH-HHHHHHHHTTCEEEE
T ss_pred ChHhHH-HHHHHHHHCCCEEEE
Confidence 764433 333455667877664
No 399
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.00 E-value=0.072 Score=51.92 Aligned_cols=76 Identities=22% Similarity=0.322 Sum_probs=47.8
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc-----CCCcEEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL-----SQYEIVVD 166 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~-----~~~DvVi~ 166 (444)
.+.+|+|+|+|++|..+++.+...|.+++..+|.+.-...-+..+ .. . .++ ...++..+.+ ..+|+|||
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~--v~~--~~~~~~~~~~~~~~~~g~D~vid 237 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-R--LVN--PLEEDLLEVVRRVTGSGVEVLLE 237 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-E--EEC--TTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-h--ccC--cCccCHHHHHHHhcCCCCCEEEE
Confidence 678999999999999999998899998888887542211111112 11 1 111 1112222222 36999999
Q ss_pred ccCChHh
Q 013384 167 ATDNAPS 173 (444)
Q Consensus 167 ~~D~~~~ 173 (444)
|+.....
T Consensus 238 ~~g~~~~ 244 (343)
T 2dq4_A 238 FSGNEAA 244 (343)
T ss_dssp CSCCHHH
T ss_pred CCCCHHH
Confidence 9988544
No 400
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=91.99 E-value=0.27 Score=45.17 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=30.0
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDIN 39 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 367788999985 7899999999999996 67777754
No 401
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.99 E-value=0.2 Score=46.45 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=48.6
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-c-cCcceEEEEeecCCcc-cHHhhc------C
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-I-NSTVHIIEHREALRTS-NALEIL------S 159 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-l-np~~~v~~~~~~~~~~-~~~~~~------~ 159 (444)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.+.-....+.. + ....++..+...++.. ....++ .
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46778899998 56799999999999997 68888875433222222 1 1123455555555542 222222 3
Q ss_pred CCcEEEEccC
Q 013384 160 QYEIVVDATD 169 (444)
Q Consensus 160 ~~DvVi~~~D 169 (444)
..|++|.+..
T Consensus 83 ~id~lv~nAg 92 (252)
T 3h7a_A 83 PLEVTIFNVG 92 (252)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 6688776643
No 402
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=91.97 E-value=0.18 Score=47.38 Aligned_cols=87 Identities=21% Similarity=0.168 Sum_probs=53.6
Q ss_pred cEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcCC--CcEEEEccCC
Q 013384 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILSQ--YEIVVDATDN 170 (444)
Q Consensus 95 ~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~~--~DvVi~~~D~ 170 (444)
+|+|.|+ |.+|+.+++.|. .| -++..+|.+.. .+...+.. +...+.+++ +|+||.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~~---------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 64 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHSK---------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTCS---------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEeccccc---------------cccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence 6999996 779999999999 77 46777665430 01112222 233445554 9999988642
Q ss_pred hH-----------------hHHHHHHHHHHcCCcEEEEcccCCcc
Q 013384 171 AP-----------------SRYMISDCCVVLGKPLVSGAALGLEG 198 (444)
Q Consensus 171 ~~-----------------~r~~i~~~~~~~~~p~i~~~~~g~~G 198 (444)
.. .-..+.++|...++.+|+.+.....|
T Consensus 65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~ 109 (299)
T 1n2s_A 65 TAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109 (299)
T ss_dssp CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSC
T ss_pred CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEe
Confidence 11 12345567777777788776554443
No 403
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=91.96 E-value=0.41 Score=44.54 Aligned_cols=37 Identities=11% Similarity=0.190 Sum_probs=30.6
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..+++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 61 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRS 61 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 457888999998 56799999999999997 67777654
No 404
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=91.95 E-value=0.15 Score=47.47 Aligned_cols=36 Identities=28% Similarity=0.459 Sum_probs=29.7
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36778899998 56799999999999997 67777654
No 405
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.94 E-value=0.36 Score=48.80 Aligned_cols=79 Identities=19% Similarity=0.200 Sum_probs=48.1
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccCcce--EEE-E---eecCC-cccHHhhcCCCc
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INSTVH--IIE-H---REALR-TSNALEILSQYE 162 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp~~~--v~~-~---~~~~~-~~~~~~~~~~~D 162 (444)
..-.+|.|||+|.+|..+|..|+. | -+++++|.|.-....+++ .+|... +.. . ...+. ..+..+.++++|
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G-~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-N-HEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-C-CeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 334589999999999999999997 7 478899876543333333 222100 000 0 00111 123445678999
Q ss_pred EEEEccCCh
Q 013384 163 IVVDATDNA 171 (444)
Q Consensus 163 vVi~~~D~~ 171 (444)
+||.|+-++
T Consensus 112 vViiaVPt~ 120 (432)
T 3pid_A 112 YVIIATPTD 120 (432)
T ss_dssp EEEECCCCE
T ss_pred EEEEeCCCc
Confidence 999998765
No 406
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=91.94 E-value=0.029 Score=49.33 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=29.5
Q ss_pred cEEEEecCcccccccCCCCceecCchhhhhhhhhhHHHhh
Q 013384 343 HILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMK 382 (444)
Q Consensus 343 ~~lIDVR~~~ef~~ghIpgAiniP~~~l~~~~~~l~~~~~ 382 (444)
.++||||.+.||+ |||+|||...++.+.++-..|+.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~~~~~~~~~~~ 157 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEVEGEEAERWFE 157 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEEEETTHHHHHH
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHHhHHHHHHHHH
Confidence 4899999999999 99999999888776655555443
No 407
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=91.93 E-value=0.086 Score=50.52 Aligned_cols=90 Identities=12% Similarity=0.128 Sum_probs=54.4
Q ss_pred hhcCcEEEECCCccHHH-HHHHHHH-cCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 91 LLKSSILVIGAGGLGSP-ALLYLAA-CGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~-ia~~La~-~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
++..+|.|||+|.+|.. .+..|.. .|+.-+.++|.|.-....+..... +. . ..+..+++++.|+|+.|+
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-~~-------~-~~~~~~ll~~~D~V~i~t 74 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYR-IM-------P-FDSIESLAKKCDCIFLHS 74 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHT-CC-------B-CSCHHHHHTTCSEEEECC
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC-CC-------C-cCCHHHHHhcCCEEEEeC
Confidence 34568999999999996 8888876 355445577765432111111000 10 1 134566667899999888
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+..- ..+...|.+.|++++.
T Consensus 75 p~~~h-~~~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 75 STETH-YEIIKILLNLGVHVYV 95 (308)
T ss_dssp CGGGH-HHHHHHHHHTTCEEEE
T ss_pred CcHhH-HHHHHHHHHCCCcEEE
Confidence 76533 3334456677787664
No 408
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=91.93 E-value=0.16 Score=46.63 Aligned_cols=37 Identities=32% Similarity=0.375 Sum_probs=31.4
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~ 48 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTE 48 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCH
Confidence 578889999985 7799999999999997 688887654
No 409
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.91 E-value=0.17 Score=46.38 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=29.3
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~ 39 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQ 39 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 6778899998 56799999999999996 577766543
No 410
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.91 E-value=0.094 Score=51.79 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=47.6
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc-----CCCcEEEE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL-----SQYEIVVD 166 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~-----~~~DvVi~ 166 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+.-...-+.++.-. ..++..-..++..+.+ ..+|+|||
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT---DCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS---EEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc---EEEccccccchHHHHHHHHhCCCccEEEE
Confidence 357899999999999999998899998888887543221111112211 1111110001121111 36999999
Q ss_pred ccCChHhH
Q 013384 167 ATDNAPSR 174 (444)
Q Consensus 167 ~~D~~~~r 174 (444)
|+....+.
T Consensus 272 ~~G~~~~~ 279 (376)
T 1e3i_A 272 CAGTAQTL 279 (376)
T ss_dssp SSCCHHHH
T ss_pred CCCCHHHH
Confidence 99875543
No 411
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.90 E-value=0.24 Score=50.90 Aligned_cols=102 Identities=14% Similarity=0.236 Sum_probs=58.6
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccc-------c----------c----cCcceEEEEeec-CC
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMH-------R----------I----NSTVHIIEHREA-LR 150 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~-------R----------l----np~~~v~~~~~~-~~ 150 (444)
..+|.|||+|..|..+|.+|+..|. ++.++|.+.-....+. + . .+++-+...+.. ..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 3589999999999999999999997 7888887542111110 0 0 122222222211 00
Q ss_pred c---ccHHhhcCCCcEEEEccCCh-HhHHHHHHHHHHcCCcEEEEcccC
Q 013384 151 T---SNALEILSQYEIVVDATDNA-PSRYMISDCCVVLGKPLVSGAALG 195 (444)
Q Consensus 151 ~---~~~~~~~~~~DvVi~~~D~~-~~r~~i~~~~~~~~~p~i~~~~~g 195 (444)
. +.....+.+-++|||++-.. ..-..+.+.+...++.++.+.+.|
T Consensus 83 ~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 83 DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 1 11223345567888776543 233344455666778787765443
No 412
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=91.88 E-value=0.072 Score=50.80 Aligned_cols=72 Identities=21% Similarity=0.258 Sum_probs=48.4
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-ccC------cceEEEEeecCCcccHHhhcCCCc
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-INS------TVHIIEHREALRTSNALEILSQYE 162 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-lnp------~~~v~~~~~~~~~~~~~~~~~~~D 162 (444)
.+++++|+|+|+||+|..++..|+..| +++++|.+.-....+.. +.. .+.+...+ + .+.+.++|
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~-----~~~~~~~D 195 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L-----DVDLDGVD 195 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T-----TCCCTTCC
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H-----HHhhCCCC
Confidence 467889999999999999999999999 99998876432222221 111 01222211 1 33457899
Q ss_pred EEEEccCC
Q 013384 163 IVVDATDN 170 (444)
Q Consensus 163 vVi~~~D~ 170 (444)
+||+|+..
T Consensus 196 ilVn~ag~ 203 (287)
T 1nvt_A 196 IIINATPI 203 (287)
T ss_dssp EEEECSCT
T ss_pred EEEECCCC
Confidence 99999864
No 413
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=91.88 E-value=0.13 Score=48.38 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=30.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57889999998 45799999999999997 77777754
No 414
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.84 E-value=0.15 Score=49.71 Aligned_cols=35 Identities=26% Similarity=0.326 Sum_probs=31.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|.+++..+|.+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 201 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPS 201 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 67899999999999999999999999888888764
No 415
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=91.82 E-value=0.21 Score=46.15 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=29.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 45 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLP 45 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 56799999999999996 57777654
No 416
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.82 E-value=0.079 Score=52.27 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=30.3
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 225 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 225 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 35789999999999999998888999888888754
No 417
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=91.81 E-value=0.36 Score=47.21 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=51.5
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccc----c-----ccCcceEEEEeecCCcc-cHHhh
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMH----R-----INSTVHIIEHREALRTS-NALEI 157 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~----R-----lnp~~~v~~~~~~~~~~-~~~~~ 157 (444)
..|++++|+|.| .||+|..+++.|+..|. ++.++|.+.-....+. . .....++..+...++.. ....+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 368899999998 57799999999999997 6888887654332221 1 11223455555555542 22222
Q ss_pred -------cCCCcEEEEccC
Q 013384 158 -------LSQYEIVVDATD 169 (444)
Q Consensus 158 -------~~~~DvVi~~~D 169 (444)
+...|+||.+..
T Consensus 120 ~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 347888887653
No 418
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=91.81 E-value=0.15 Score=47.45 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=29.9
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLK 45 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57788999998 56799999999999997 47777654
No 419
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=91.80 E-value=0.24 Score=46.56 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=31.0
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~ 45 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNP 45 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 467889999998 57799999999999997 577777543
No 420
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=91.79 E-value=0.25 Score=47.61 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=50.0
Q ss_pred cEEEECCCccHHHH-HHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccCCh
Q 013384 95 SILVIGAGGLGSPA-LLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATDNA 171 (444)
Q Consensus 95 ~VlIvG~GglGs~i-a~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D~~ 171 (444)
+|.|||+|.+|... +..|...|+.-+.++|.+.-....+....... . ...+..++++ +.|+|+.|+-+.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~-------~-~~~~~~~~l~~~~~D~V~i~tp~~ 73 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIG-------K-SVTSVEELVGDPDVDAVYVSTTNE 73 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCS-------C-CBSCHHHHHTCTTCCEEEECSCGG
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCC-------c-ccCCHHHHhcCCCCCEEEEeCChh
Confidence 69999999999997 88888766655668887643222211111100 0 0123445554 478888887653
Q ss_pred HhHHHHHHHHHHcCCcEEE
Q 013384 172 PSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~p~i~ 190 (444)
.. ..+...|.+.|++++.
T Consensus 74 ~h-~~~~~~al~~Gk~v~~ 91 (332)
T 2glx_A 74 LH-REQTLAAIRAGKHVLC 91 (332)
T ss_dssp GH-HHHHHHHHHTTCEEEE
T ss_pred Hh-HHHHHHHHHCCCeEEE
Confidence 32 2333345556666553
No 421
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=91.75 E-value=0.28 Score=50.25 Aligned_cols=88 Identities=15% Similarity=0.071 Sum_probs=53.2
Q ss_pred HHHhhhc-CcEEEECCCccHHHHHHHHHHc------CCCcEEEeeCCccccccccc-ccCcceEEEEeecCCcccHHhhc
Q 013384 87 GQSNLLK-SSILVIGAGGLGSPALLYLAAC------GVGRLGIVDHDVVELNNMHR-INSTVHIIEHREALRTSNALEIL 158 (444)
Q Consensus 87 ~q~~L~~-~~VlIvG~GglGs~ia~~La~~------Gvg~i~lvD~D~V~~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~ 158 (444)
..+.|++ ++|.|||+|..|..+|++|..+ |+ ++.+-+.. ......+ ....+.+ ..-...+..+.+
T Consensus 47 ~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~-~ViVg~r~--~sks~e~A~e~G~~v----~d~ta~s~aEAa 119 (525)
T 3fr7_A 47 LPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKIGLRK--GSKSFDEARAAGFTE----ESGTLGDIWETV 119 (525)
T ss_dssp HHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCC-EEEEEECT--TCSCHHHHHHTTCCT----TTTCEEEHHHHH
T ss_pred ChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCC-EEEEEeCC--chhhHHHHHHCCCEE----ecCCCCCHHHHH
Confidence 3678999 9999999999999999999998 77 33332221 1111111 0011100 000012456677
Q ss_pred CCCcEEEEccCChHhHHHHHHHH
Q 013384 159 SQYEIVVDATDNAPSRYMISDCC 181 (444)
Q Consensus 159 ~~~DvVi~~~D~~~~r~~i~~~~ 181 (444)
+.+|+||.++-.......+.+..
T Consensus 120 ~~ADVVILaVP~~~~~eVl~eI~ 142 (525)
T 3fr7_A 120 SGSDLVLLLISDAAQADNYEKIF 142 (525)
T ss_dssp HHCSEEEECSCHHHHHHHHHHHH
T ss_pred hcCCEEEECCChHHHHHHHHHHH
Confidence 88999999987655544555543
No 422
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.69 E-value=0.23 Score=47.19 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=31.0
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 80 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLD 80 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 468899999998 57799999999999996 57777654
No 423
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=91.68 E-value=0.29 Score=47.37 Aligned_cols=86 Identities=10% Similarity=0.100 Sum_probs=54.7
Q ss_pred cCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh
Q 013384 93 KSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~ 171 (444)
.-||.|+|+|.+|..+++.|... ++.-+.++|.+.-. .+. ..+..+ .+..+++.+.|+||.|+-+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-----~gv~~~------~d~~~ll~~~DvViiatp~~ 69 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-----TPVFDV------ADVDKHADDVDVLFLCMGSA 69 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-----SCEEEG------GGGGGTTTTCSEEEECSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-----CCCcee------CCHHHHhcCCCEEEEcCCcH
Confidence 34799999999999999999876 44445677765322 111 112111 22334557899999999765
Q ss_pred HhHHHHHHHHHHcCCcEEEEc
Q 013384 172 PSRYMISDCCVVLGKPLVSGA 192 (444)
Q Consensus 172 ~~r~~i~~~~~~~~~p~i~~~ 192 (444)
.. ......+.+.++++|...
T Consensus 70 ~h-~~~~~~al~aG~~Vv~ek 89 (320)
T 1f06_A 70 TD-IPEQAPKFAQFACTVDTY 89 (320)
T ss_dssp TH-HHHHHHHHTTTSEEECCC
T ss_pred HH-HHHHHHHHHCCCEEEECC
Confidence 32 333345667788877644
No 424
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.67 E-value=0.12 Score=50.94 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=30.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 225 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 225 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 35789999999999999999989999888888753
No 425
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=91.67 E-value=0.22 Score=47.03 Aligned_cols=36 Identities=17% Similarity=0.383 Sum_probs=29.8
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDH 125 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~ 125 (444)
..|++++|+|.| .||+|..+++.|+..|. ++.++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 356788899998 56799999999999997 6777765
No 426
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=91.65 E-value=0.22 Score=45.88 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=30.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~ 41 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAARRV 41 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 36778899998 56799999999999997 677877653
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=91.65 E-value=0.21 Score=46.76 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=30.9
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 65 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINK 65 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCH
Confidence 47788999998 56799999999999996 577877654
No 428
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=91.62 E-value=0.12 Score=47.61 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=30.1
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ |++|.++++.|+..|. ++.++|.+
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~ 44 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDIN 44 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 477889999985 7799999999999996 67777754
No 429
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.61 E-value=0.19 Score=51.52 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=32.1
Q ss_pred hcCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVV 128 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V 128 (444)
.-.+|.|||+|.+|.++|..|+.. |...++++|.|.-
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 446899999999999999999999 8657999998754
No 430
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=91.61 E-value=0.67 Score=43.83 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=56.0
Q ss_pred cEEEEC-CCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcC--CCcEEEEccC
Q 013384 95 SILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILS--QYEIVVDATD 169 (444)
Q Consensus 95 ~VlIvG-~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvVi~~~D 169 (444)
+|+|.| .|.+|+.+++.|+.. |-.++.++|...-... . ++.+...+.. +...++++ ++|+||.+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------~--~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 71 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------G--IKFITLDVSNRDEIDRAVEKYSIDAIFHLAG 71 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------T--CCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------C--ceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence 589999 588999999999998 3246777764321111 1 2233344443 33445565 8999998865
Q ss_pred ChH----------------hHHHHHHHHHHcCC-cEEEEcccCCc
Q 013384 170 NAP----------------SRYMISDCCVVLGK-PLVSGAALGLE 197 (444)
Q Consensus 170 ~~~----------------~r~~i~~~~~~~~~-p~i~~~~~g~~ 197 (444)
... .-..+.++|...++ .+|+.+.....
T Consensus 72 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 116 (317)
T 3ajr_A 72 ILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVF 116 (317)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC
T ss_pred ccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHh
Confidence 321 01234556666665 57766544433
No 431
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=91.59 E-value=0.15 Score=31.91 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013384 9 DVARVLGEIETLKAAKSDIDYRISALE 35 (444)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (444)
...+..++|++|++|++.|+++++.||
T Consensus 8 Kn~a~qqDIddlkrQN~~Le~Qir~le 34 (34)
T 1a93_B 8 KNDTHQQDIDDLKRQNALLEQQVRALX 34 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hhHhhHhhHHHHHHHHHHHHHHHHhcC
Confidence 345567788888888888888877654
No 432
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=91.56 E-value=0.14 Score=48.51 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=30.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 42 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNG 42 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 47788899998 46799999999999997 577777653
No 433
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=91.55 E-value=0.42 Score=46.89 Aligned_cols=86 Identities=13% Similarity=0.098 Sum_probs=51.8
Q ss_pred cCcEEEECCCccHHH-HHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCC--CcEEEEcc
Q 013384 93 KSSILVIGAGGLGSP-ALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQ--YEIVVDAT 168 (444)
Q Consensus 93 ~~~VlIvG~GglGs~-ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~ 168 (444)
.-||.|||+|.+|.. .+..|... ++.-..++|.|.-. +....+.+. .+ .+..+++.+ .|+|+.||
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~~~~--~~------~~~~~ll~~~~vD~V~i~t 73 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL---SKERYPQAS--IV------RSFKELTEDPEIDLIVVNT 73 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG---GGTTCTTSE--EE------SCSHHHHTCTTCCEEEECS
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHHhCCCCc--eE------CCHHHHhcCCCCCEEEEeC
Confidence 358999999999986 77777765 55555677876321 222222222 22 233455544 88998888
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+. ....+...|.+.|++++.
T Consensus 74 p~~-~H~~~~~~al~aGkhVl~ 94 (362)
T 3fhl_A 74 PDN-THYEYAGMALEAGKNVVV 94 (362)
T ss_dssp CGG-GHHHHHHHHHHTTCEEEE
T ss_pred ChH-HHHHHHHHHHHCCCeEEE
Confidence 763 334444556666666554
No 434
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=91.55 E-value=0.25 Score=47.43 Aligned_cols=85 Identities=21% Similarity=0.247 Sum_probs=50.9
Q ss_pred CcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccCC
Q 013384 94 SSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATDN 170 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D~ 170 (444)
.+|.|||+|.+|...+..|... ++.-+.++|.+.-....+.. . +..+ .+..++++ +.|+|+.|+.+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~---~--~~~~------~~~~~~l~~~~~D~V~i~tp~ 79 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP---G--CVIE------SDWRSVVSAPEVEAVIIATPP 79 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT---T--CEEE------SSTHHHHTCTTCCEEEEESCG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh---h--Cccc------CCHHHHhhCCCCCEEEEeCCh
Confidence 4799999999999999999886 45455677876432211111 1 1111 22344553 68888888765
Q ss_pred hHhHHHHHHHHHHcCCcEEE
Q 013384 171 APSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i~ 190 (444)
... ..+...|.+.|++++.
T Consensus 80 ~~h-~~~~~~al~~Gk~v~~ 98 (315)
T 3c1a_A 80 ATH-AEITLAAIASGKAVLV 98 (315)
T ss_dssp GGH-HHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHCCCcEEE
Confidence 432 3333345566666553
No 435
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=91.54 E-value=0.18 Score=46.27 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=29.8
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 56799999999999996 57777654
No 436
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=91.54 E-value=0.2 Score=46.50 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=30.4
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 47 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRK 47 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 357788899998 56799999999999997 67777654
No 437
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.53 E-value=0.11 Score=52.13 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=62.9
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc-------cc-------CcceEEEEeecCCc-ccH
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-------IN-------STVHIIEHREALRT-SNA 154 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-------ln-------p~~~v~~~~~~~~~-~~~ 154 (444)
...++|+|.|+ |++|+++++.|+..|. ++.+++...-....+.| .. ...++..+...+.. +..
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 44568999996 7799999999987775 56666544321111222 10 01345555556554 222
Q ss_pred HhhcCCCcEEEEccCChH--------------hHHHHHHHHHHcCCcEEEEcccCCcce
Q 013384 155 LEILSQYEIVVDATDNAP--------------SRYMISDCCVVLGKPLVSGAALGLEGQ 199 (444)
Q Consensus 155 ~~~~~~~DvVi~~~D~~~--------------~r~~i~~~~~~~~~p~i~~~~~g~~G~ 199 (444)
. .+.++|+||.+..... .-..+.++|......+|+.++... |.
T Consensus 146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GT 202 (427)
T ss_dssp C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GS
T ss_pred C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CC
Confidence 2 6678999998864321 123455566666677888776655 64
No 438
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=91.52 E-value=0.48 Score=44.36 Aligned_cols=36 Identities=28% Similarity=0.327 Sum_probs=30.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence 57888999998 56799999999999997 67777754
No 439
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.51 E-value=0.13 Score=50.07 Aligned_cols=72 Identities=18% Similarity=0.239 Sum_probs=48.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCcccc----ccccccc---CcceEEEEeecCCcccHHhhcCCCcE
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVEL----NNMHRIN---STVHIIEHREALRTSNALEILSQYEI 163 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~----sNl~Rln---p~~~v~~~~~~~~~~~~~~~~~~~Dv 163 (444)
...||.|+|+|.+|+.++..|+..|+ +++.|+|-+.-.. .+|.... +.+++. . +..+.+.++|+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~--~------~~~~a~~~aDi 79 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY--S------AEYSDAKDADL 79 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE--E------CCGGGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE--E------CcHHHhcCCCE
Confidence 45689999999999999999999998 6999999743211 1222222 223322 1 11344689999
Q ss_pred EEEccCCh
Q 013384 164 VVDATDNA 171 (444)
Q Consensus 164 Vi~~~D~~ 171 (444)
||.+...+
T Consensus 80 Vvi~ag~~ 87 (326)
T 3vku_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99887654
No 440
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.48 E-value=0.066 Score=52.84 Aligned_cols=35 Identities=37% Similarity=0.467 Sum_probs=30.2
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~ 224 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIV 224 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 35789999999999999998888999888888754
No 441
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.46 E-value=0.12 Score=50.19 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=31.9
Q ss_pred hhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 91 L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
-.+.+|+|.|+|++|..+++.+..+|...+..+|..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~ 194 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDIS 194 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEech
Confidence 357789999999999999999999999999988854
No 442
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=91.44 E-value=0.27 Score=45.74 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=29.8
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 56799999999999996 57777754
No 443
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.42 E-value=0.25 Score=46.29 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=31.1
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|+++.++|-| .+|+|..+|+.|++.|. ++.++|.+
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~ 40 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL 40 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC
Confidence 368999999998 56799999999999997 67777754
No 444
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.41 E-value=0.14 Score=48.11 Aligned_cols=36 Identities=28% Similarity=0.351 Sum_probs=30.6
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence 57889999998 56799999999999996 57787754
No 445
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=91.41 E-value=0.21 Score=46.63 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=28.6
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDH 125 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~ 125 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 43 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYH 43 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEec
Confidence 46788999998 57799999999999997 4666553
No 446
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=91.39 E-value=0.19 Score=47.31 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=31.4
Q ss_pred HHhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 88 QSNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 88 q~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
...|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3467889999998 57799999999999997 57887764
No 447
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=91.38 E-value=0.25 Score=48.26 Aligned_cols=88 Identities=17% Similarity=0.197 Sum_probs=53.0
Q ss_pred cCcEEEECCCccHHHHHHHHHHc--CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEcc
Q 013384 93 KSSILVIGAGGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDAT 168 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~--Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~ 168 (444)
..+|.|||+|.+|...+..|... |+.-+.++|.+.-....+.... .+..+ .+..++++ +.|+|+.|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~---~~~~~------~~~~~ll~~~~~D~V~i~t 83 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT---GARGH------ASLTDMLAQTDADIVILTT 83 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH---CCEEE------SCHHHHHHHCCCSEEEECS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc---CCcee------CCHHHHhcCCCCCEEEECC
Confidence 35799999999999999999987 5555567787543222211111 11222 23445554 788888888
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+.. ...+...|.+.|++++.
T Consensus 84 p~~~-h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 84 PSGL-HPTQSIECSEAGFHVMT 104 (354)
T ss_dssp CGGG-HHHHHHHHHHTTCEEEE
T ss_pred CcHH-HHHHHHHHHHCCCCEEE
Confidence 7642 33333445566666554
No 448
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=91.36 E-value=0.35 Score=45.62 Aligned_cols=39 Identities=21% Similarity=0.355 Sum_probs=32.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVE 129 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~ 129 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+.-.
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~ 45 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEP 45 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhh
Confidence 47788999998 56799999999999997 78888876543
No 449
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.36 E-value=0.32 Score=49.92 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=30.3
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
+.+|.|||+|.+|..+|..|+..|. +++++|.|.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 5689999999999999999999996 688898764
No 450
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=91.30 E-value=0.15 Score=54.01 Aligned_cols=63 Identities=14% Similarity=0.183 Sum_probs=39.5
Q ss_pred CCcccchhHHHHHHHHHHHHHHHhcCCCCCCCceeEeecC--CCeEEEEEeeccCCCCCccCCCC
Q 013384 230 SGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDAL--SARIRIVKIRGRSSQCEACGENS 292 (444)
Q Consensus 230 ~~~~~~~~~i~g~l~a~e~lk~l~g~~~~~~~~~~~~d~~--~~~~~~~~~~~r~~~C~~Cg~~~ 292 (444)
.+.++.+++++++++++|++|++.+..+.+.+.++.+-.. ..-+......+++|.|++|+..+
T Consensus 384 IPAIATTnAiVaGl~~lE~~Kvl~~~~~~~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~ 448 (640)
T 1y8q_B 384 IPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKP 448 (640)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhccHHhhhhhheeeccCCCCcEEeecccCCCCCCCcccCCcc
Confidence 3456678899999999999999987433333333322212 11233333335899999996554
No 451
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=91.29 E-value=0.37 Score=45.22 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=23.6
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCC
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGV 117 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gv 117 (444)
++.++|+|.|+ |.+|+.+++.|...|.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 56789999995 7799999999999986
No 452
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.28 E-value=0.089 Score=50.95 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=58.2
Q ss_pred HhhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEcc
Q 013384 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDAT 168 (444)
Q Consensus 89 ~~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~ 168 (444)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-.. .. ....+. . .+..++++.+|+|+.++
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~--~~~g~~--~-------~~l~ell~~aDvVvl~~ 204 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KA--EKINAK--A-------VSLEELLKNSDVISLHV 204 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HH--HHTTCE--E-------CCHHHHHHHCSEEEECC
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HH--HhcCce--e-------cCHHHHHhhCCEEEEec
Confidence 36889999999999999999999999996 677777543210 00 001111 0 13456778899999887
Q ss_pred CC-hHhHHHHHHHHH---HcCCcEEEEcc
Q 013384 169 DN-APSRYMISDCCV---VLGKPLVSGAA 193 (444)
Q Consensus 169 D~-~~~r~~i~~~~~---~~~~p~i~~~~ 193 (444)
-. +.++..+++... +.+.-+|+.+.
T Consensus 205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence 54 335544433221 23444777654
No 453
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=91.27 E-value=0.14 Score=46.94 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=29.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .|++|..+++.|+..|. ++.++|.+
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTS 40 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36778899998 56799999999999996 67777654
No 454
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=91.26 E-value=0.74 Score=47.42 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=55.9
Q ss_pred cCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccCCh
Q 013384 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATDNA 171 (444)
Q Consensus 93 ~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D~~ 171 (444)
..+|+|.| .|.+|+.+++.|...|. +++.++.+.-.... ....+. +...+.+.++|+||.+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~~------------v~~d~~-~~~~~~l~~~D~Vih~A~~~ 212 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEPKPGK------------RFWDPL-NPASDLLDGADVLVHLAGEP 212 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSCCTTC------------EECCTT-SCCTTTTTTCSEEEECCCC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCccc------------eeeccc-chhHHhcCCCCEEEECCCCc
Confidence 46899999 57799999999999996 67776654322110 111112 22345567899999875432
Q ss_pred ------------------H-hHHHHHHHHHHcCC-cEEEEcccCCcc
Q 013384 172 ------------------P-SRYMISDCCVVLGK-PLVSGAALGLEG 198 (444)
Q Consensus 172 ------------------~-~r~~i~~~~~~~~~-p~i~~~~~g~~G 198 (444)
. ++.++..++...+. .+|+.++.+.+|
T Consensus 213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 0 22233322555554 578877766665
No 455
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=91.23 E-value=0.17 Score=47.04 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=29.4
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQ 40 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 6678899998 57799999999999997 67777754
No 456
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=91.22 E-value=0.14 Score=49.57 Aligned_cols=90 Identities=14% Similarity=0.117 Sum_probs=52.5
Q ss_pred hcCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEcc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDAT 168 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~ 168 (444)
+..+|.|||+|.+|...+..|... ++.-+.++|.+.-....+....... . ...+..+++. +.|+|+.|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-------~-~~~~~~~ll~~~~~D~V~i~t 75 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIP-------V-AYGSYEELCKDETIDIIYIPT 75 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCC-------C-CBSSHHHHHHCTTCSEEEECC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCC-------c-eeCCHHHHhcCCCCCEEEEcC
Confidence 345899999999999999999885 4434446676532211111111100 0 1134455554 688888888
Q ss_pred CChHhHHHHHHHHHHcCCcEEE
Q 013384 169 DNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 169 D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
.+.. ...+...|.+.|++++.
T Consensus 76 p~~~-h~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 76 YNQG-HYSAAKLALSQGKPVLL 96 (330)
T ss_dssp CGGG-HHHHHHHHHHTTCCEEE
T ss_pred CCHH-HHHHHHHHHHCCCeEEE
Confidence 7643 33344455666776664
No 457
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.20 E-value=0.15 Score=49.98 Aligned_cols=75 Identities=20% Similarity=0.230 Sum_probs=49.2
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCC-CcEEEeeCCcc--c--cccccc-ccCcceEEEEeecCCcccHHhhcCCCcE
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVV--E--LNNMHR-INSTVHIIEHREALRTSNALEILSQYEI 163 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gv-g~i~lvD~D~V--~--~sNl~R-lnp~~~v~~~~~~~~~~~~~~~~~~~Dv 163 (444)
+.+.||.|||+ |.+|+.+|..|+..|. .++.|+|-+.- + .-+|.. ..|..++.. + .+..+.++++|+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-----t-~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-----T-SDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-----E-SCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-----c-CCHHHHhCCCCE
Confidence 55789999997 9999999999999997 58999997531 1 111222 223222221 1 233455789999
Q ss_pred EEEccCCh
Q 013384 164 VVDATDNA 171 (444)
Q Consensus 164 Vi~~~D~~ 171 (444)
||-+...+
T Consensus 80 VvitaG~p 87 (343)
T 3fi9_A 80 IVSSGGAP 87 (343)
T ss_dssp EEECCC--
T ss_pred EEEccCCC
Confidence 99887654
No 458
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=91.20 E-value=0.36 Score=45.59 Aligned_cols=96 Identities=9% Similarity=0.057 Sum_probs=57.6
Q ss_pred cCcEEEECC-CccHHHHHHHHHHc--CCCcEEEeeCCcccccccccccCcceEEEEeecCCc-ccHHhhcC--CCcEEEE
Q 013384 93 KSSILVIGA-GGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRT-SNALEILS--QYEIVVD 166 (444)
Q Consensus 93 ~~~VlIvG~-GglGs~ia~~La~~--Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~-~~~~~~~~--~~DvVi~ 166 (444)
+++|+|.|+ |.+|+.+++.|+.. | -+++++|.+.-.. . +.+.+ +.+...+.. +...++++ ++|+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~-~---~~~~~--~~~~~D~~d~~~~~~~~~~~~~d~vih 74 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGT-ENVIASDIRKLNT-D---VVNSG--PFEVVNALDFNQIEHLVEVHKITDIYL 74 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCG-GGEEEEESCCCSC-H---HHHSS--CEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCC-CEEEEEcCCCccc-c---ccCCC--ceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence 368999997 77999999999998 5 4677777543221 1 11122 233344443 33445566 8999998
Q ss_pred ccCChHh----------------HHHHHHHHHHcCC-cEEEEcccC
Q 013384 167 ATDNAPS----------------RYMISDCCVVLGK-PLVSGAALG 195 (444)
Q Consensus 167 ~~D~~~~----------------r~~i~~~~~~~~~-p~i~~~~~g 195 (444)
+...... -..+.++|.+.++ .+|+.+..+
T Consensus 75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 120 (312)
T 2yy7_A 75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIA 120 (312)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGG
T ss_pred CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH
Confidence 8653211 1244556666665 566655443
No 459
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=91.19 E-value=0.21 Score=45.70 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=27.5
Q ss_pred hhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEee
Q 013384 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVD 124 (444)
Q Consensus 91 L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD 124 (444)
|++++|+|.| .||+|..+++.|+..|. ++.++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 5678899998 56799999999999996 566663
No 460
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=91.17 E-value=0.21 Score=46.19 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=29.1
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDH 125 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~ 125 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 47788899998 67799999999999996 5777665
No 461
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=91.16 E-value=0.23 Score=45.32 Aligned_cols=36 Identities=33% Similarity=0.441 Sum_probs=30.0
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRT 40 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999996 7899999999999997 57777654
No 462
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.15 E-value=0.18 Score=47.54 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=29.9
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~ 62 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADID 62 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 357888999998 56899999999999997 67777654
No 463
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.13 E-value=0.24 Score=47.27 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=48.9
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc-c-cCcceEEEEeecCCcc-cHHhh-------c
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-I-NSTVHIIEHREALRTS-NALEI-------L 158 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-l-np~~~v~~~~~~~~~~-~~~~~-------~ 158 (444)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.-....+.. + ....++..+...++.. ...++ +
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 367889999985 6799999999999996 68888765432222211 1 1123455555555542 22222 2
Q ss_pred CCCcEEEEccC
Q 013384 159 SQYEIVVDATD 169 (444)
Q Consensus 159 ~~~DvVi~~~D 169 (444)
...|+||.+..
T Consensus 107 g~id~lvnnAg 117 (301)
T 3tjr_A 107 GGVDVVFSNAG 117 (301)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887643
No 464
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=91.12 E-value=0.26 Score=48.38 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=52.8
Q ss_pred hcCcEEEECCCccHHH-HHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSP-ALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~-ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~ 167 (444)
+.-+|.|||+|.+|.. .+..|... |+.-+.++|.|.-....+....+.+. .+ .+..++++ +.|+|+.|
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~--~~------~~~~~ll~~~~vD~V~i~ 75 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIP--VL------DNVPAMLNQVPLDAVVMA 75 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCC--EE------SSHHHHHHHSCCSEEEEC
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCc--cc------CCHHHHhcCCCCCEEEEc
Confidence 3458999999999985 78888775 54445577876543322222212111 11 23455554 56888888
Q ss_pred cCChHhHHHHHHHHHHcCCcEEE
Q 013384 168 TDNAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 168 ~D~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+.+. ....+...|.+.|++++.
T Consensus 76 tp~~-~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 76 GPPQ-LHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp SCHH-HHHHHHHHHHHTTCEEEE
T ss_pred CCcH-HHHHHHHHHHHCCCeEEE
Confidence 7653 334444455666666554
No 465
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.11 E-value=0.18 Score=50.48 Aligned_cols=37 Identities=35% Similarity=0.513 Sum_probs=33.2
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVE 129 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~ 129 (444)
...|+|||+|..|..+|..|++.|..+++|+|.+..-
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 4579999999999999999999998789999987653
No 466
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.10 E-value=0.24 Score=46.60 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=26.8
Q ss_pred HhhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 89 SNLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 89 ~~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
..+++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 57 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARD 57 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 346778899998 57799999999999997 47777654
No 467
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.09 E-value=0.079 Score=51.58 Aligned_cols=76 Identities=21% Similarity=0.255 Sum_probs=46.2
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccH----HhhcCCCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA----LEILSQYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~----~~~~~~~DvVi~~ 167 (444)
.+.+|+|+|+|++|..+++.+...|. ++..+|.+.-...-+..+... ..++ ...++. .+....+|+||+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~---~~~d--~~~~~~~~~~~~~~~~~d~vid~ 237 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGAD---LVVN--PLKEDAAKFMKEKVGGVHAAVVT 237 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCS---EEEC--TTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCC---EEec--CCCccHHHHHHHHhCCCCEEEEC
Confidence 35789999999999999999999998 788877532211111112211 1111 111121 1222579999999
Q ss_pred cCChHh
Q 013384 168 TDNAPS 173 (444)
Q Consensus 168 ~D~~~~ 173 (444)
+....+
T Consensus 238 ~g~~~~ 243 (339)
T 1rjw_A 238 AVSKPA 243 (339)
T ss_dssp SCCHHH
T ss_pred CCCHHH
Confidence 987544
No 468
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=91.08 E-value=0.24 Score=45.11 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=30.1
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ |++|.++++.|+..|. ++.++|.+
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRT 40 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999985 7899999999999996 57777754
No 469
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.04 E-value=0.23 Score=46.07 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=30.6
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57888999998 56799999999999997 67787754
No 470
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=91.04 E-value=0.21 Score=46.81 Aligned_cols=77 Identities=14% Similarity=0.303 Sum_probs=47.9
Q ss_pred hhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCccccccccc-c-cCcceEEEEeecCCcc-cHHh-------hcC
Q 013384 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-I-NSTVHIIEHREALRTS-NALE-------ILS 159 (444)
Q Consensus 91 L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-l-np~~~v~~~~~~~~~~-~~~~-------~~~ 159 (444)
|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.-....+.. + ....++..+...++.. .... .+.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45678899985 6799999999999997 57888765332222211 1 1223455555555542 2222 235
Q ss_pred CCcEEEEcc
Q 013384 160 QYEIVVDAT 168 (444)
Q Consensus 160 ~~DvVi~~~ 168 (444)
..|++|.+.
T Consensus 81 ~iD~lVnnA 89 (264)
T 3tfo_A 81 RIDVLVNNA 89 (264)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 788888775
No 471
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.03 E-value=0.15 Score=49.00 Aligned_cols=70 Identities=20% Similarity=0.227 Sum_probs=45.9
Q ss_pred cEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCc--cc--cccccc----ccCcceEEEEeecCCcccHHhhcCCCcEEE
Q 013384 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDV--VE--LNNMHR----INSTVHIIEHREALRTSNALEILSQYEIVV 165 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~--V~--~sNl~R----lnp~~~v~~~~~~~~~~~~~~~~~~~DvVi 165 (444)
||.|||+|++|+++|..|+..|. ++|.|+|-+. .+ .-+|.- ++...++.... ..+.++++|+||
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~-------d~~~~~~aDvVv 74 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-------DYSLLKGSEIIV 74 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES-------CGGGGTTCSEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC-------CHHHhCCCCEEE
Confidence 69999999999999999998875 8999999643 10 001111 22233333321 123468999999
Q ss_pred EccCCh
Q 013384 166 DATDNA 171 (444)
Q Consensus 166 ~~~D~~ 171 (444)
-+..-+
T Consensus 75 itAG~p 80 (294)
T 2x0j_A 75 VTAGLA 80 (294)
T ss_dssp ECCCCC
T ss_pred EecCCC
Confidence 877644
No 472
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.01 E-value=0.12 Score=51.03 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=30.3
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 226 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 226 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999889999888888753
No 473
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.96 E-value=0.17 Score=46.95 Aligned_cols=36 Identities=31% Similarity=0.377 Sum_probs=30.0
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57788999998 57799999999999997 57777654
No 474
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.96 E-value=0.31 Score=45.81 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=30.4
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~ 48 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDIC 48 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecc
Confidence 57889999998 56799999999999997 67777753
No 475
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=90.95 E-value=0.2 Score=46.29 Aligned_cols=36 Identities=33% Similarity=0.420 Sum_probs=30.2
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 578899999985 7799999999999997 57776654
No 476
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.95 E-value=0.29 Score=45.42 Aligned_cols=36 Identities=28% Similarity=0.364 Sum_probs=29.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~ 42 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRN 42 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36778899998 56799999999999996 57777654
No 477
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.94 E-value=0.16 Score=48.52 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=29.7
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
++|.|||+|.+|+.+|..|+.+|. +++++|.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 479999999999999999999996 789998763
No 478
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.89 E-value=0.22 Score=47.04 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=29.0
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~ 46 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDV 46 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 467788999985 7899999999999997 788877654
No 479
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.89 E-value=0.17 Score=48.03 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.1
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
++|.|||+|.+|+.+|..|+.+|. +++++|.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCH
Confidence 689999999999999999999997 789988764
No 480
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=90.89 E-value=0.19 Score=47.25 Aligned_cols=37 Identities=22% Similarity=0.378 Sum_probs=28.6
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+.+++|+|.| .||+|..+++.|+..|. ++.++|.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 62 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRL 62 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 56778888888 56799999999999997 688877653
No 481
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=90.88 E-value=0.29 Score=45.79 Aligned_cols=37 Identities=30% Similarity=0.452 Sum_probs=30.9
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~ 45 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPE 45 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 577889999985 7799999999999997 677877653
No 482
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.86 E-value=0.26 Score=46.40 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=31.0
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~ 62 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSK 62 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 467889999996 7899999999999996 688877653
No 483
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.86 E-value=0.16 Score=52.08 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=48.8
Q ss_pred hhhcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcCCCcEEEEccC
Q 013384 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILSQYEIVVDATD 169 (444)
Q Consensus 90 ~L~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~D 169 (444)
.|.+++|+|+|+|++|..+|+.|+..|. ++.++|.+.....-.... ... ..+..+.+..+|+|+.++.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~--g~d---------v~~lee~~~~aDvVi~atG 329 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATME--GLQ---------VLTLEDVVSEADIFVTTTG 329 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT--TCE---------ECCGGGTTTTCSEEEECSS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh--CCc---------cCCHHHHHHhcCEEEeCCC
Confidence 3788999999999999999999999998 888888754221100000 010 1123455678999998877
Q ss_pred ChH
Q 013384 170 NAP 172 (444)
Q Consensus 170 ~~~ 172 (444)
+..
T Consensus 330 ~~~ 332 (488)
T 3ond_A 330 NKD 332 (488)
T ss_dssp CSC
T ss_pred Chh
Confidence 543
No 484
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.82 E-value=0.2 Score=48.90 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=28.8
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|.. +..+|.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~ 201 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARS 201 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCC
Confidence 457899999999999999988889986 7777753
No 485
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=90.82 E-value=0.15 Score=47.96 Aligned_cols=36 Identities=36% Similarity=0.431 Sum_probs=29.8
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~ 59 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTD 59 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 57788999998 56799999999999997 67776643
No 486
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.82 E-value=0.13 Score=50.73 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=30.3
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~ 224 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 224 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 35789999999999999999889999888888753
No 487
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.81 E-value=0.11 Score=50.39 Aligned_cols=77 Identities=25% Similarity=0.331 Sum_probs=46.4
Q ss_pred hcCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCcccccccccccCcceEEEEeecCCcccH----HhhcCCCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNA----LEILSQYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~----~~~~~~~DvVi~~ 167 (444)
.+.+|+|.|+|++|..+++.+...|. ++..+|.+.-...-+.++..... ++. ..++. .+....+|+||++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~---i~~--~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVA---VNA--RDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEE---EET--TTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEE---EeC--CCcCHHHHHHHhCCCCCEEEEe
Confidence 56789999999999999999999998 78887753321111111222111 111 11111 1122478999999
Q ss_pred cCChHhH
Q 013384 168 TDNAPSR 174 (444)
Q Consensus 168 ~D~~~~r 174 (444)
+......
T Consensus 240 ~g~~~~~ 246 (340)
T 3s2e_A 240 AVSPKAF 246 (340)
T ss_dssp SCCHHHH
T ss_pred CCCHHHH
Confidence 8765543
No 488
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=90.79 E-value=0.16 Score=47.20 Aligned_cols=39 Identities=15% Similarity=0.033 Sum_probs=32.1
Q ss_pred HHHhhhcCcEEEECC---CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 87 GQSNLLKSSILVIGA---GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 87 ~q~~L~~~~VlIvG~---GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
-...+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~ 49 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVG 49 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecc
Confidence 345788999999996 5899999999999997 67777654
No 489
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=90.79 E-value=0.24 Score=46.98 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=50.5
Q ss_pred hhhcCcEEEEC-CCccHHHHHHHHHHcCCCcEEEeeCCccccccccc-c------cCcceEEEEeecCCcc-cHHhh---
Q 013384 90 NLLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-I------NSTVHIIEHREALRTS-NALEI--- 157 (444)
Q Consensus 90 ~L~~~~VlIvG-~GglGs~ia~~La~~Gvg~i~lvD~D~V~~sNl~R-l------np~~~v~~~~~~~~~~-~~~~~--- 157 (444)
.|++++|+|.| .||+|..+++.|+..|. ++.++|.+.-....+.. + ....++..+...++.. ....+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 57888999998 56799999999999996 68888765322111111 1 0234566666666542 22222
Q ss_pred ----cCCCcEEEEccC
Q 013384 158 ----LSQYEIVVDATD 169 (444)
Q Consensus 158 ----~~~~DvVi~~~D 169 (444)
+...|+||.+..
T Consensus 94 ~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 246899998754
No 490
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=90.79 E-value=0.13 Score=50.26 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=52.4
Q ss_pred cCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhc--CCCcEEEEccC
Q 013384 93 KSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEIL--SQYEIVVDATD 169 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~--~~~DvVi~~~D 169 (444)
..+|.|||+|.+|...+..|... |+.-+.++|.+.-....+.... .+. . ..+..+++ .+.|+|+.|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-g~~-------~-~~~~~~~l~~~~~D~V~i~tp 75 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-NCA-------G-DATMEALLAREDVEMVIITVP 75 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-TCC-------C-CSSHHHHHHCSSCCEEEECSC
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-CCC-------C-cCCHHHHhcCCCCCEEEEeCC
Confidence 35799999999999999999876 5544557776543221111100 110 1 13445566 56888888887
Q ss_pred ChHhHHHHHHHHHHcCCcEEE
Q 013384 170 NAPSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 170 ~~~~r~~i~~~~~~~~~p~i~ 190 (444)
+.. ...+...|.+.|++++.
T Consensus 76 ~~~-h~~~~~~al~~gk~vl~ 95 (354)
T 3db2_A 76 NDK-HAEVIEQCARSGKHIYV 95 (354)
T ss_dssp TTS-HHHHHHHHHHTTCEEEE
T ss_pred hHH-HHHHHHHHHHcCCEEEE
Confidence 642 23333455566666554
No 491
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.75 E-value=0.2 Score=43.42 Aligned_cols=33 Identities=30% Similarity=0.565 Sum_probs=29.4
Q ss_pred CcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
.+|+|||.|..|.++|..|++.|. +++|+|...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 369999999999999999999997 799998653
No 492
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.75 E-value=0.1 Score=50.63 Aligned_cols=70 Identities=24% Similarity=0.218 Sum_probs=48.7
Q ss_pred hcCcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCccccccccc-cc--CcceEEEEeecCCcccHHhhcCCCcEEEEc
Q 013384 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHR-IN--STVHIIEHREALRTSNALEILSQYEIVVDA 167 (444)
Q Consensus 92 ~~~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~R-ln--p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~ 167 (444)
..++|+|||+|..|...++.|... ++.+|.++|.+ ....+.. +. ..+.+... +..+.+.++|+||.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-------~~~eav~~aDIVi~a 190 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-------APADIAAQADIVVTA 190 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-------CHHHHHHHCSEEEEC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-------CHHHHHhhCCEEEEc
Confidence 357899999999999999999874 78999999988 3222222 11 12333222 345566789999999
Q ss_pred cCC
Q 013384 168 TDN 170 (444)
Q Consensus 168 ~D~ 170 (444)
|-.
T Consensus 191 T~s 193 (313)
T 3hdj_A 191 TRS 193 (313)
T ss_dssp CCC
T ss_pred cCC
Confidence 865
No 493
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=90.69 E-value=0.41 Score=44.28 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=29.7
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467888999984 7799999999999997 57777654
No 494
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.64 E-value=0.18 Score=49.09 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=48.0
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCC-CcEEEeeCCcccc----ccccccc----CcceEEEEeecCCcccHHhhcCCCcE
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVEL----NNMHRIN----STVHIIEHREALRTSNALEILSQYEI 163 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gv-g~i~lvD~D~V~~----sNl~Rln----p~~~v~~~~~~~~~~~~~~~~~~~Dv 163 (444)
..+|.|+|+|.+|+.++..|+..|. +++.++|-+.-.. -+|.... +.+++ +.. + .+.+.++|+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i--~~~-----~-~~a~~~aDv 76 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKT--SYG-----T-YEDCKDADI 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEE--EEE-----C-GGGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEE--EeC-----c-HHHhCCCCE
Confidence 4589999999999999999999997 6999999753211 1232222 23333 211 1 235689999
Q ss_pred EEEccCCh
Q 013384 164 VVDATDNA 171 (444)
Q Consensus 164 Vi~~~D~~ 171 (444)
||-+...+
T Consensus 77 Vvi~ag~p 84 (326)
T 3pqe_A 77 VCICAGAN 84 (326)
T ss_dssp EEECCSCC
T ss_pred EEEecccC
Confidence 99887654
No 495
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.61 E-value=0.19 Score=48.94 Aligned_cols=36 Identities=31% Similarity=0.533 Sum_probs=31.7
Q ss_pred cCcEEEECCCccHHHHHHHHHHcCCCcEEEeeCCccc
Q 013384 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVE 129 (444)
Q Consensus 93 ~~~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~V~ 129 (444)
...|+|||+|.+|+.+|..|++.|. +++|+|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4579999999999999999999997 79999976553
No 496
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=90.61 E-value=0.37 Score=48.97 Aligned_cols=89 Identities=16% Similarity=0.059 Sum_probs=56.4
Q ss_pred hcCcEEEECCCcc--HHHHHHHHHHcC--CCcEEEeeCCccccccccc----cc-CcceEEEEeecCCcccHHhhcCCCc
Q 013384 92 LKSSILVIGAGGL--GSPALLYLAACG--VGRLGIVDHDVVELNNMHR----IN-STVHIIEHREALRTSNALEILSQYE 162 (444)
Q Consensus 92 ~~~~VlIvG~Ggl--Gs~ia~~La~~G--vg~i~lvD~D~V~~sNl~R----ln-p~~~v~~~~~~~~~~~~~~~~~~~D 162 (444)
++.||.|||+|++ |..++..|+..- .|++.|+|-|.-....++. +. ...+++. + .+..+.++++|
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~l~~~~~~I~~-----T-tD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRYEA-----V-STLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTTSCEEEEE-----E-SSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHHHhccCCeEEE-----E-CCHHHHhcCCC
Confidence 4569999999996 688888888732 3599999987522111111 11 1122221 1 23456679999
Q ss_pred EEEEcc--CChHhHHHHHHHHHHcCC
Q 013384 163 IVVDAT--DNAPSRYMISDCCVVLGK 186 (444)
Q Consensus 163 vVi~~~--D~~~~r~~i~~~~~~~~~ 186 (444)
+||.+. ...+.|..--+..+++|+
T Consensus 78 fVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 78 IVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred EEEeccccCCcccchhhhhhhhccCc
Confidence 999888 455666655556677766
No 497
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=90.60 E-value=0.16 Score=49.14 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=51.8
Q ss_pred CcEEEECCCccHHHHHHHHHHc-CCCcEEEeeCCcccccccccccCcceEEEEeecCCcccHHhhcC--CCcEEEEccCC
Q 013384 94 SSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRINSTVHIIEHREALRTSNALEILS--QYEIVVDATDN 170 (444)
Q Consensus 94 ~~VlIvG~GglGs~ia~~La~~-Gvg~i~lvD~D~V~~sNl~Rlnp~~~v~~~~~~~~~~~~~~~~~--~~DvVi~~~D~ 170 (444)
.+|.|||+|.+|...+..|... |+.-+.++|.+.-....+.... .+ . + .+..+++. +.|+|+.|+.+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~-~~--~-~------~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY-GC--E-V------RTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT-TC--E-E------CCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh-CC--C-c------CCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999885 5544557776543222211111 11 1 1 23455554 68999888865
Q ss_pred hHhHHHHHHHHHHcCCcEEE
Q 013384 171 APSRYMISDCCVVLGKPLVS 190 (444)
Q Consensus 171 ~~~r~~i~~~~~~~~~p~i~ 190 (444)
.. ...+...|.+.|++++.
T Consensus 74 ~~-h~~~~~~al~~gk~v~~ 92 (331)
T 4hkt_A 74 DT-HADLIERFARAGKAIFC 92 (331)
T ss_dssp GG-HHHHHHHHHHTTCEEEE
T ss_pred hh-HHHHHHHHHHcCCcEEE
Confidence 33 33344455566666554
No 498
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.59 E-value=0.46 Score=44.07 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=29.3
Q ss_pred hhhcCcEEEECCC---ccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGAG---GLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~G---glGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|++ |+|..+++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~ 42 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAG 42 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCc
Confidence 4678899999974 399999999999997 46676654
No 499
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=90.58 E-value=0.26 Score=45.64 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=29.9
Q ss_pred hhhcCcEEEECC-CccHHHHHHHHHHcCCCcEEEeeCC
Q 013384 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (444)
Q Consensus 90 ~L~~~~VlIvG~-GglGs~ia~~La~~Gvg~i~lvD~D 126 (444)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367788999985 7899999999999996 57777754
No 500
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.53 E-value=0.32 Score=48.65 Aligned_cols=31 Identities=29% Similarity=0.294 Sum_probs=27.6
Q ss_pred cEEEECCCccHHHHHHHHHHcCCCcEEEeeCCc
Q 013384 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (444)
Q Consensus 95 ~VlIvG~GglGs~ia~~La~~Gvg~i~lvD~D~ 127 (444)
+|.|||+|.+|..+|..|+. | -+++++|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G-~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q-NEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T-SEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-C-CEEEEEECCH
Confidence 69999999999999999998 8 5789998754
Done!