BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013385
(444 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 290/444 (65%), Positives = 341/444 (76%), Gaps = 1/444 (0%)
Query: 1 MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 60
MQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQ
Sbjct: 109 MQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQ 168
Query: 61 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXX 120
T+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RI
Sbjct: 169 TILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAAL 227
Query: 121 XXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP 180
+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P
Sbjct: 228 NFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP 287
Query: 181 ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL 240
TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR+
Sbjct: 288 NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRI 347
Query: 241 TLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP 300
LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ PP
Sbjct: 348 FLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 301 VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 360
N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+ E
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE 467
Query: 361 DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVET 420
+E T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE
Sbjct: 468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 527
Query: 421 VGNIPNQALACGLTGKRFMNPKQN 444
VG IP +ALACG T K +N +N
Sbjct: 528 VGRIPTKALACGGTAKSLINNPKN 551
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 168/426 (39%), Gaps = 85/426 (19%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +++ D D + D E ++ L+DW+H + + ++ +P
Sbjct: 115 QYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYH---------IPAPSIQGAAQP 165
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING+G++ AA S I++V+ K YR+R+
Sbjct: 166 DATLINGKGRYVGGPAAELS------------------IVNVEQGKKYRMRLISLSCDPN 207
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV-RGR 178
+ H++ ++E DG +P VD + I++G+ YS +L NQ P NYWI A +GR
Sbjct: 208 WQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGR 266
Query: 179 KP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP- 232
A +L Y + + S P + ++ D A G P P
Sbjct: 267 NGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDP---AAPGIPTPG 323
Query: 233 PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 290
+ + R L GF+ ++ IN + P P L I G +
Sbjct: 324 AADVNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGAQ------------ 363
Query: 291 SNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 349
+AN L +G VY L N V++++ P HP+HLHGH F V
Sbjct: 364 -----------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSV 407
Query: 350 LGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIG 409
+ R G T T +RFV DNPG W FHCHIE H G
Sbjct: 408 V-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPWFFHCHIEFHLMNG 461
Query: 410 MGVVLA 415
+ +V A
Sbjct: 462 LAIVFA 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 168/426 (39%), Gaps = 85/426 (19%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +++ D D + D E ++ L+DW+H + + ++ +P
Sbjct: 115 QYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYH---------IPAPSIQGAAQP 165
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING+G++ AA S I++V+ K YR+R+
Sbjct: 166 DATLINGKGRYVGGPAAELS------------------IVNVEQGKKYRMRLISLSCDPN 207
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV-RGR 178
+ H++ ++E DG +P VD + I++G+ YS +L NQ P NYWI A +GR
Sbjct: 208 WQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGR 266
Query: 179 KP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP- 232
A +L Y + + S P + ++ D A G P P
Sbjct: 267 NGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDP---AAPGIPTPG 323
Query: 233 PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 290
+ + R L GF+ ++ IN + P P L I G +
Sbjct: 324 AADVNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGAQ------------ 363
Query: 291 SNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 349
+AN L +G VY L N V++++ P HP+HLHGH F V
Sbjct: 364 -----------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSV 407
Query: 350 LGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIG 409
+ R G T T +RFV DNPG W FHCHIE H G
Sbjct: 408 V-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPWFFHCHIEFHLMNG 461
Query: 410 MGVVLA 415
+ +V A
Sbjct: 462 LAIVFA 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 164/438 (37%), Gaps = 85/438 (19%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + + D + ++ L+DW+H E G +
Sbjct: 116 QYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAITA------- 168
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
+ LI+G G+ + ++AA ++ V+ K YR+R+
Sbjct: 169 DSTLIDGLGRTHVNVAA-----------------VPLSVITVEVGKRYRMRLVSISCDPN 211
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ H M ++E DG Q VD++ I++ + YS +L NQ P NYWI A G
Sbjct: 212 YDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGG 270
Query: 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN 235
G A+ L Y + + P+T H+K + P N
Sbjct: 271 EGFDGGINSAI--LRYDGATTAD------PVTVA--STVHTKCLIETDLHPLSRNGVPGN 320
Query: 236 FHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 293
H+ N ++ GF + IN VS T P P L I G A D
Sbjct: 321 PHQGGADCNLNLSL-GFACGNFVINGVSFTPPTVPVLLQICSGANTAAD----------- 368
Query: 294 YDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 352
L SG V L N+T+++ L A P HP+HLHGHDF V
Sbjct: 369 ------------LLPSGSVISLPSNSTIEIALPAGAAGGP-----HPFHLHGHDFAVSES 411
Query: 353 GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
+ D+ + +RF DNPG W HCHI+ H G +
Sbjct: 412 ASNSTSNYDDPIWRDVVSIGGVGDNV------TIRFCTDNPGPWFLHCHIDWHLDAGFAI 465
Query: 413 VLALGVETVGNIPNQALA 430
V A +IPN A A
Sbjct: 466 VFA------EDIPNTASA 477
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 164/431 (38%), Gaps = 83/431 (19%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G ++V D D K + D + ++ L+DW+H L+++ +
Sbjct: 115 QYCDGLRGPIVVYDPQDPHKSLYDVDDDSTVITLADWYH---------LAAKVGSPVPTA 165
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING G+ +L A + ++ V K YR R+
Sbjct: 166 DATLINGLGRSIDTLNADLA------------------VITVTKGKRYRFRLVSLSCDPN 207
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ H + V+EAD ++P VD + I++ + YS +L +QD NYWI A G
Sbjct: 208 HVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVG-NYWIRALPNSGT 266
Query: 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSNKIFALMGSPKPPT 234
R A+ L Y P+ P TP + S + + A GSP P
Sbjct: 267 RNFDGGVNSAI--LRYD----GAAPVEPTTSQTPSTNPLVESALTTLEGTAAPGSPAPGG 320
Query: 235 NFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 292
L L N GF K+ IN S T P P L I G + A D
Sbjct: 321 ---VDLAL----NMAFGFAGGKFTINGASFTPPTVPVLLQILSGAQSAQD---------- 363
Query: 293 EYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG 351
L SG VY L N +++ L A A P HP+HLHGH F V+
Sbjct: 364 -------------LLPSGSVYSLPANADIEISLP-ATAAAPGFP--HPFHLHGHTFAVV- 406
Query: 352 RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMG 411
R G T E P +RF DNPG W HCHI+ H G
Sbjct: 407 RSAGSSTYNYENPVYRDVVSTGS-----PGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA 461
Query: 412 VVLALGVETVG 422
VV+A + V
Sbjct: 462 VVMAEDIPEVA 472
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 163/430 (37%), Gaps = 81/430 (18%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G ++V D D + D + ++ L+DW+H L+++ +
Sbjct: 115 QYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH---------LAAKVGAPVPTA 165
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING G+ +LAA + ++ V K YR R+
Sbjct: 166 DATLINGLGRSAATLAADLA------------------VITVTKGKRYRFRLVSLSCDPN 207
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ H + V+EAD ++P VD + I++ + YS +L +QD NYWI A G
Sbjct: 208 YTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD-NYWIRALPNSGT 266
Query: 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSNKIFALMGSPKPPT 234
+ T A +L Y P+ P TP + S + K A GSP P
Sbjct: 267 QNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTLKGTAAPGSPTPGG 320
Query: 235 NFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 292
L L N GF + IN S T P P L I G + A D
Sbjct: 321 ---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQSAAD---------- 363
Query: 293 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 352
+ P VY L N +++ L A A P HP+HLHGH F V+ R
Sbjct: 364 ----LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HPFHLHGHVFAVV-R 407
Query: 353 GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
G T + P +RF DNPG W HCHI+ H G V
Sbjct: 408 SAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Query: 413 VLALGVETVG 422
V+A + V
Sbjct: 463 VMAEDIPDVA 472
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 163/430 (37%), Gaps = 81/430 (18%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G ++V D D + D + ++ L+DW+H L+++ +
Sbjct: 115 QYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH---------LAAKVGAPVPTA 165
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING G+ +LAA + ++ V K YR R+
Sbjct: 166 DATLINGLGRSAATLAADLA------------------VITVTKGKRYRFRLVSLSCDPN 207
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ H + V+EAD ++P VD + I++ + YS +L +QD NYWI A G
Sbjct: 208 YTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD-NYWIRALPNSGT 266
Query: 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSNKIFALMGSPKPPT 234
+ T A +L Y P+ P TP + S + K A GSP P
Sbjct: 267 QNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTLKGTAAPGSPTPGG 320
Query: 235 NFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 292
L L N GF + IN S T P P L I G + A D
Sbjct: 321 ---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQSAAD---------- 363
Query: 293 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 352
+ P VY L N +++ L A A P HP+HLHGH F V+ R
Sbjct: 364 ----LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HPFHLHGHVFAVV-R 407
Query: 353 GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
G T + P +RF DNPG W HCHI+ H G V
Sbjct: 408 SAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Query: 413 VLALGVETVG 422
V+A + V
Sbjct: 463 VMAEDIPDVA 472
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 155/424 (36%), Gaps = 81/424 (19%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D E ++ L+DW+H V P R+
Sbjct: 115 QYCDGLRGPFVVYDPNDPHANLYDVDDESTVITLADWYH-------VAAKLGP-RFPKGA 166
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
+ LING G+ + A + ++ V K YR R+
Sbjct: 167 DSTLINGLGRSTSTPTADLA------------------VISVTKGKRYRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ +H++ V+EADG QP VD + I++ + YS +L NQD NYWI A G
Sbjct: 209 YTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVD-NYWIRANPNFGT 267
Query: 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP--P 233
G A +L Y P+ P + + + L P P P
Sbjct: 268 TGFADGVNSA--ILRYDDAD---------PVEPVTNQTGTTLLLETDLHPLTSMPVPGNP 316
Query: 234 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 293
T L LN +G T + IN S T P P L I G A D
Sbjct: 317 TQGGADLN-LNMAFNFDG-TNFFINGESFTPPTVPVLLQIISGANTAQD----------- 363
Query: 294 YDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL-G 351
L SG VY L N+++++ A HP+HLHGH F V+
Sbjct: 364 ------------LLPSGSVYSLPSNSSIEITFPATTAAP---GAPHPFHLHGHVFAVVRS 408
Query: 352 RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMG 411
G + +D +RF DNPG W HCHI+ H G
Sbjct: 409 AGSTSYNYDDPVWRDVVSTGTPQAG-----DNVTIRFQTDNPGPWFLHCHIDFHLDAGFA 463
Query: 412 VVLA 415
VV+A
Sbjct: 464 VVMA 467
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 166/432 (38%), Gaps = 93/432 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G L+V D +D + D + ++ LSDW+H + ++G + P
Sbjct: 115 QYCDGLRGPLVVYDPSDPYASMYDVDDDTTVITLSDWYHTAA---KLGPAFPP-----NA 166
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
++LING G+F + G+A ++ V+ NK YR R+
Sbjct: 167 DSVLINGLGRF--------AGGNASDLA----------VITVEQNKRYRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H M ++E DG +P EVD + I++ + YS +L Q NYWI A
Sbjct: 209 FTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVD-NYWIRAIPNTGT 267
Query: 180 PATPPAL--TLLNY------HPT---SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 228
T L +L Y PT + S IPL + P +
Sbjct: 268 IDTTGGLNSAILRYSGADIVDPTANATTSVIPLVETDLVP------------------LD 309
Query: 229 SPKPPTN--FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 286
SP P + +N + NG T + INN +L P P L I G + A D
Sbjct: 310 SPAAPGDPVVGGVDLAMNLDFSFNG-TNFFINNETLIPPTVPVLLQILSGAQSASDL--- 365
Query: 287 PENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVI--LQNANAIRPNLSEIHPWHLH 343
L +G VY L LN+T+++ + N + HP+HLH
Sbjct: 366 --------------------LPTGSVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLH 405
Query: 344 GHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 403
GH F V+ R G D T P +RF DN G W HCHI+
Sbjct: 406 GHAFSVV-RSAG---SSDYNYVNPVRRDTVSTGN--PGDNVTIRFTTDNAGPWFLHCHID 459
Query: 404 PHFHIGMGVVLA 415
H G +V A
Sbjct: 460 FHLEAGFAIVFA 471
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 160/435 (36%), Gaps = 90/435 (20%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D E ++ L+DW+H + +G P +G
Sbjct: 115 QYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYHTAA---RLG----PRFPLGAD 167
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
TL ING G+ + A + +++VQ K YR R+
Sbjct: 168 ATL-INGLGRSASTPTAALA------------------VINVQHGKRYRFRLVSISCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ H + V+E DG QP VD + I++ + YS +L NQ NYWI A G
Sbjct: 209 YTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG-NYWIRANPNFGT 267
Query: 176 RGRKPATPPALTLLNYHPT-------SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 228
G A+ P + S IPL + P A M
Sbjct: 268 VGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLIETNLHP---------------LARMP 312
Query: 229 SPKPPT--NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 286
P PT + L L N N F INN S T P P L I G + A D
Sbjct: 313 VPGSPTPGGVDKALNLAFNFNGTNFF----INNASFTPPTVPVLLQILSGAQTAQD---- 364
Query: 287 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 346
+ P VY L ++T+++ L A A+ P HP+HLHGH
Sbjct: 365 ----------LLP--------AGSVYPLPAHSTIEITLP-ATALAPGAP--HPFHLHGHA 403
Query: 347 FWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 406
F V+ R G T A +RF DNPG W HCHI+ H
Sbjct: 404 FAVV-RSAGSTTYNYNDPIFRDVVSTGTPAA---GDNVTIRFQTDNPGPWFLHCHIDFHL 459
Query: 407 HIGMGVVLALGVETV 421
G +V A V V
Sbjct: 460 EAGFAIVFAEDVADV 474
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 156/430 (36%), Gaps = 94/430 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D + ++ L+DW+H V P G
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASLYDIDNDDTVITLADWYH-------VAAKLGPRFPFGSD 167
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
TL ING G + G ++ V K YR R+
Sbjct: 168 STL-INGLG------------------RTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA----GV 175
+ NH M ++EAD QP EVD + I++ + YS +L +Q P NYWI A G
Sbjct: 209 HTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQ-PVDNYWIRANPAFGN 267
Query: 176 RGRKPATPPALTLLN----YHPTSASKIPLSP------PPITPRWDDYDHSKSFSNKIFA 225
G A+ + PTS P P P++P
Sbjct: 268 TGFAGGINSAILRYDGAPEIEPTSVQTTPTKPLNEVDLHPLSP---------------MP 312
Query: 226 LMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNG 285
+ GSP+ P + L L+ N N F IN+ + P P L I G + A Q+
Sbjct: 313 VPGSPE-PGGVDKPLNLVFNFNGTNFF----INDHTFVPPSVPVLLQILSGAQAA--QDL 365
Query: 286 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 345
PE V++L N+++++ A A P HP+HLHGH
Sbjct: 366 VPE--------------------GSVFVLPSNSSIEISFP-ATANAPGFP--HPFHLHGH 402
Query: 346 DFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPH 405
F V+ D P +RF +NPG W HCHI+ H
Sbjct: 403 AFAVVRSAGSSVYNYDNPIFRDVVSTGQ------PGDNVTIRFETNNPGPWFLHCHIDFH 456
Query: 406 FHIGMGVVLA 415
G VV+A
Sbjct: 457 LDAGFAVVMA 466
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 155/441 (35%), Gaps = 98/441 (22%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G+ +V D D + D ++ ++DW+H L P + P
Sbjct: 136 QYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYH----SLSTVLFPNPNKAPPAP 191
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
T LING G+ + +N SA Q ++ VQ K YR RI
Sbjct: 192 DTTLINGLGR-------NSANPSAGQLA----------VVSVQSGKRYRFRIVSTSCFPN 234
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H+M V+E DG QP VD + I++G+ YSV++ NQ NYWI A
Sbjct: 235 YAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRA------ 287
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP-KPPTNFHR 238
P + ++ IF G+ PT
Sbjct: 288 ---------------------------NPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN 320
Query: 239 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMK 298
T LN N I A P P G L +N +F+
Sbjct: 321 SGTALNEANLIPLINPGA--------PGNPVPGGADINLNLRIGRNATTADFTINGAPFI 372
Query: 299 PP------------VNANTTL-GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 345
PP N N L G V L N +++ + HP+HLHGH
Sbjct: 373 PPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPGGGN--------HPFHLHGH 424
Query: 346 DFWVLGR-GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEP 404
+F V+ G + + V F RFV DNPG W HCHI+
Sbjct: 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTF-------RFVTDNPGPWFLHCHIDW 477
Query: 405 HFHIGMGVVLALGVETVGNIP 425
H G+ VV A E + NIP
Sbjct: 478 HLEAGLAVVFA---EDIPNIP 495
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 154/422 (36%), Gaps = 82/422 (19%)
Query: 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS--RPLRWIGEP 59
Q G+ G I+ + P+ YD E +L LS+W+H V + S P P
Sbjct: 111 QYEDGMKGLFIIK---DDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIP 167
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
Q L++N VQP+ TY LRI
Sbjct: 168 QNLIVNNTMNLTWE---------------------------VQPDTTYLLRIVNVGGFVS 200
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+++H+M VVE DG + D + I + Y+VL+ T D N+ I
Sbjct: 201 QYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTM 260
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF-------ALMGSPKP 232
P+ LN + S + + P + D +F + + A+ G P
Sbjct: 261 LDVIPSDLQLN----ATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPD- 315
Query: 233 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 292
H + N NG NN++ T P P L ++ +G N S
Sbjct: 316 ----HVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVL--------SSGDQANNSE 363
Query: 293 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 352
Y +NT ++L + V+++L N + + HP+HLHGH F + R
Sbjct: 364 IY-------GSNT----HTFILEKDEIVEIVLNNQD------TGTHPFHLHGHAFQTIQR 406
Query: 353 --------GEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 403
GE + + D T + P +RF ADNPG W FHCHIE
Sbjct: 407 DRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIE 466
Query: 404 PH 405
H
Sbjct: 467 WH 468
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 148/407 (36%), Gaps = 90/407 (22%)
Query: 31 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 90
+ L+DW+H + ++P G LING+G+ S +A +
Sbjct: 146 ITLTDWYHTAAQNGP----AKP----GGADATLINGQGRGPSSPSADLA----------- 186
Query: 91 NEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIY 150
++ V K YR R+ + H+M +++ D VQP V + IY
Sbjct: 187 -------VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIY 239
Query: 151 SGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRW 210
+ + YS +L NQ + NYWI A P
Sbjct: 240 AAQRYSFILNANQAVN-NYWIRA---------------------------------NPNQ 265
Query: 211 DDYDHSKSFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTP 268
+ + ++ I G+ +P T+ + L+ Q ++ T A+ P +P
Sbjct: 266 GNVGFTNGINSAILRYSGAAATQPTTSQTSSVQPLD-QTNLHPLTATAV-------PGSP 317
Query: 269 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPV-----------NANTTLGSG-VYMLGL 316
G + + AF+ NG +F + + P V +A L SG VY L
Sbjct: 318 VAGGVNLAINQAFNFNGT-NHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSLPS 376
Query: 317 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTA 376
+ +++ +A HP+HLHGH F V+ R G T A
Sbjct: 377 DANIEISFPATSAAA---GGPHPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDTVSTGTPA 432
Query: 377 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 423
+RF +NPG W HCHI+ H G VV A + V +
Sbjct: 433 A---NDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQDIPDVAS 476
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 150/430 (34%), Gaps = 92/430 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D + ++ L+DW+H + R+ G
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP--------RFPGGA 166
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING+G+ A S ++ V K YR R+
Sbjct: 167 DATLINGKGRAPSDSVAELS------------------VIKVTKGKRYRFRLVSLSCNPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H + ++E D QP EVD + I++ + YS +L NQ NYWI A
Sbjct: 209 HTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRA------ 261
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFH 237
P + + ++ I G+P +P TN
Sbjct: 262 ---------------------------NPNFGNVGFDGGINSAILRYDGAPAVEPTTN-- 292
Query: 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 297
+ T + N ++ VS +P +P G + + AF+ NG F N +
Sbjct: 293 -QTTSVKPLNEVDLHPL-----VSTPVPGSPSSGGVDKAINMAFNFNGS-NFFINGASFV 345
Query: 298 KPPV-----------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 345
P V A L SG VY+L N ++++ A +HLHGH
Sbjct: 346 PPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHP---FHLHGH 402
Query: 346 DFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPH 405
F V+ D A +RF +NPG W HCHI+ H
Sbjct: 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTNNPGPWFLHCHIDFH 458
Query: 406 FHIGMGVVLA 415
G VV+A
Sbjct: 459 LEGGFAVVMA 468
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 148/431 (34%), Gaps = 94/431 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D + ++ L+DW+H + R+ G
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP--------RFPGGA 166
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING+G+ A S ++ V K YR R+
Sbjct: 167 DATLINGKGRAPSDSVAELS------------------VIKVTKGKRYRFRLVSLSCNPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H + ++E D QP EVD + I++ + YS +L NQ NYWI A
Sbjct: 209 HTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRA------ 261
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFH 237
P + + ++ I G+P +P TN
Sbjct: 262 ---------------------------NPNFGNVGFDGGINSAILRYDGAPAVEPTTN-- 292
Query: 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 297
+ T + N ++ VS +P P G + + AF+ NG NF
Sbjct: 293 -QTTSVKPLNEVDLHPL-----VSTPVPGAPSSGGVDKAINMAFNFNG--SNFFINGASF 344
Query: 298 KPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 344
PP A L SG VY+L N ++++ A +HLHG
Sbjct: 345 VPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHP---FHLHG 401
Query: 345 HDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEP 404
H F V+ D A +RF +NPG W HCHI+
Sbjct: 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTNNPGPWFLHCHIDF 457
Query: 405 HFHIGMGVVLA 415
H G VV+A
Sbjct: 458 HLEGGFAVVMA 468
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 148/451 (32%), Gaps = 118/451 (26%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + + D + ++ L DW+H V P +G
Sbjct: 115 QYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYH-------VAAKLGPAFPLGAD 167
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
TL ING+G+ + A S ++ V P K YR R+
Sbjct: 168 ATL-INGKGRSPSTTTADLS------------------VISVTPGKRYRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI-------- 171
+ H M ++E D P VD + I++ + YS +L NQ NYWI
Sbjct: 209 YTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVD-NYWIRANPNFGN 267
Query: 172 --------SAGVR--GRKPATPPA--------LTLLNYHPTSASKIPLSPPPITPRWDDY 213
SA +R G P L +N HP A+ +P SP
Sbjct: 268 VGFTGGINSAILRYDGAAAVEPTTTQTTSTAPLNEVNLHPLVATAVPGSP---------- 317
Query: 214 DHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 273
+ G +N NG T + IN S T P P L I
Sbjct: 318 ------------VAGGVD---------LAINMAFNFNG-TNFFINGASFTPPTVPVLLQI 355
Query: 274 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRP 332
G + NA L SG VY L N +++ A
Sbjct: 356 ISGAQ-----------------------NAQDLLPSGSVYSLPSNADIEISFPATAAAPG 392
Query: 333 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 392
+HLHGH F V+ D A +RF DN
Sbjct: 393 APHP---FHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFRTDN 445
Query: 393 PGAWAFHCHIEPHFHIGMGVVLALGVETVGN 423
PG W HCHI+ H G VV A + V +
Sbjct: 446 PGPWFLHCHIDFHLEAGFAVVFAEDIPDVAS 476
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 153/438 (34%), Gaps = 96/438 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D + ++ L+DW+H + R+
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP--------RFPAGA 166
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
LING+G+ +A S ++ V K R R+
Sbjct: 167 DATLINGKGRAPSDTSAELS------------------VIKVTKGKRXRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H + ++E D + QP VD + I++ + YS +L NQ NYWI A
Sbjct: 209 FTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVD-NYWIRA------ 261
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFH 237
P + + + ++ I G+P +P TN
Sbjct: 262 ---------------------------NPNFGNVGFNGGINSAILRYDGAPAVEPTTN-- 292
Query: 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 297
+ T + N +N VS +P +P G + + AF+ NG F N +
Sbjct: 293 -QTTSVKPLNEVNLHPL-----VSTPVPGSPSSGGVDKAINMAFNFNG-SNFFINGASFV 345
Query: 298 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH--------------PWHLH 343
P V + SG T D++ + + P+ + I P+HLH
Sbjct: 346 PPSVPVLLQILSGA-----QTAQDLLPSGSVXVLPSNASIEISFPATAAAPGAPHPFHLH 400
Query: 344 GHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 403
GH F V+ R G A +RF+ +NPG W HCHI+
Sbjct: 401 GHTFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLTNNPGPWFLHCHID 456
Query: 404 PHFHIGMGVVLALGVETV 421
H G VV A V V
Sbjct: 457 FHLEGGFAVVQAEDVPDV 474
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 101 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 220
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 221 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 264
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 265 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 323
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 324 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 368
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 369 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 101 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 220
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 221 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 264
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 265 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 323
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 324 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 368
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 369 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 101 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 220
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 221 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 264
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 265 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 323
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 324 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 368
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 369 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 118/328 (35%), Gaps = 47/328 (14%)
Query: 101 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160
+ P K +RLRI + H M V+ D V F V + + G+ Y V +
Sbjct: 260 LTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTID 319
Query: 161 TNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 216
N P NYW + G+ G PA + Y A+ +P P +H
Sbjct: 320 ANS-PVGNYWFNVTFGDGLCGSSNNKFPA-AIFRYQGAPAT-LPTDQGLPVP-----NHM 371
Query: 217 KSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 276
+ + ++ P NF +R NT+ V+L + TP
Sbjct: 372 CLDNLNLTPVVTRSAPVNNFVKR-----PSNTLG---------VTLDIGGTPLF------ 411
Query: 277 LKDAFDQNGPPENFSNEYDVMKPPVNANTT--LGSGVYMLGLNTTVDVILQNANAIRPNL 334
+ NG N ++ ++ NT+ + + + L + P +
Sbjct: 412 ---VWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIV 468
Query: 335 SEIHPWHLHGHDFWVLGRGEGK---------FTKEDEXXXXXXXXXXXXTAVIFPYG-WT 384
S HP HLHGHDF VLGR + F + + P G W
Sbjct: 469 SLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWL 528
Query: 385 ALRFVADNPGAWAFHCHIEPHFHIGMGV 412
L F DNPGAW FHCHI H G+ V
Sbjct: 529 LLAFKTDNPGAWLFHCHIAWHVSGGLSV 556
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 148/437 (33%), Gaps = 94/437 (21%)
Query: 2 QRSAGLYGSLIV-DVADGEKEPFHYDGE-FNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 59
Q GL G +V D D + D + + L+DW+H + ++G P G
Sbjct: 115 QYCDGLRGPFVVYDPNDPHASRYDVDNDDTTITLADWYHTAA---KLG----PAFPNGAD 167
Query: 60 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 119
TL ING+G+ +A S ++ V K R R+
Sbjct: 168 STL-INGKGRAPSDSSAQLS------------------VVSVTKGKRXRFRLVSLSCDPN 208
Query: 120 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 179
+ H ++E D QP D + I++ + YS L NQ NYWI A
Sbjct: 209 FTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVD-NYWIRA------ 261
Query: 180 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFH 237
P + + + ++ I G+P +P TN
Sbjct: 262 ---------------------------NPNFGNVGFNGGINSAILRYDGAPAVEPTTNQS 294
Query: 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 297
LN N ++ VS +P +P G + + AF+ NG NF
Sbjct: 295 TSTQPLNETN-LHPL-------VSTPVPGSPAAGGVDKAINMAFNFNG--SNFFINGASF 344
Query: 298 KPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 344
PP A L SG V L N ++++ A +HLHG
Sbjct: 345 TPPSVPVLLQILSGAQTAQDLLPSGSVXTLPSNASIEISFPATAAAPGAPHP---FHLHG 401
Query: 345 HDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEP 404
H F V+ R G A +RF+ +NPG W HCHI+
Sbjct: 402 HVFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLTNNPGPWFLHCHIDF 457
Query: 405 HFHIGMGVVLALGVETV 421
H G VV A V V
Sbjct: 458 HLEGGFAVVQAEDVPDV 474
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 396
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 397 AFHCHIEPHFHIGMGV 412
HCHI H GM +
Sbjct: 523 LLHCHIAWHASEGMAM 538
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 1 MQRSAGLYGSLIVD---VADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWI 56
+Q GL+G LI++ AD YD + ++ L DW H SV E + ++R +
Sbjct: 173 LQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHESVFE--IWDTAR----L 219
Query: 57 GEPQTL---LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXX 113
G P L L+NG F+CS S + + G ++ ++ V+ K YRLR+
Sbjct: 220 GAPPALENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTFVEGTK-YRLRLIN 269
Query: 114 XXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171
+ NH + V+ D + P+ D + I G+ Y V++ N + NYWI
Sbjct: 270 VGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWI 326
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 396
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 397 AFHCHIEPHFHIGMGV 412
HCHI H G+ +
Sbjct: 523 LLHCHIAWHASEGLAM 538
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 1 MQRSAGLYGSLIVD---VADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEVGLSSRPLRWI 56
+Q GL+G LI++ AD YD + ++ L DW H SV E + ++R +
Sbjct: 173 LQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHESVFE--IWDTAR----L 219
Query: 57 GEPQTL---LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXX 113
G P L L+NG F+CS S + + G ++ ++ V+ K YRLR+
Sbjct: 220 GAPPALENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTFVEGTK-YRLRLIN 269
Query: 114 XXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171
+ NH + V+ D + P+ D + I G+ Y V++ N + NYWI
Sbjct: 270 VGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWI 326
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 333 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 392
N ++H H HGH F RG IFP + L
Sbjct: 970 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1013
Query: 393 PGAWAFHCHIEPHFHIGM 410
PG W HCH+ H H GM
Sbjct: 1014 PGIWLLHCHVTDHIHAGM 1031
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 333 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 392
N ++H H HGH F RG IFP + L
Sbjct: 989 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1032
Query: 393 PGAWAFHCHIEPHFHIGM 410
PG W HCH+ H H GM
Sbjct: 1033 PGIWLLHCHVTDHIHAGM 1050
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 338 HPWHLHGHDFWVLG-RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 396
HP+H+HG F ++ + GK K + T + P LR D G
Sbjct: 407 HPFHIHGTQFELISSKLNGKVQKAE-------FRALRDTINVRPNEELRLRMKQDFKGLR 459
Query: 397 AFHCHIEPHFHIGM 410
+HCHI H +GM
Sbjct: 460 MYHCHILEHEDLGM 473
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 101 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLL 159
V T RLR+ +++H + ++ ADG ++ +P EV ++ + GE VL+
Sbjct: 191 VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLV 250
Query: 160 TTNQD 164
++
Sbjct: 251 RLRKE 255
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 397
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 193 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 247
Query: 398 FHCHIEPHFHIGMGVVLALGVETVGNIPN 426
+HCH++ H +GM V L L + G IP
Sbjct: 248 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 275
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 397
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 194 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 248
Query: 398 FHCHIEPHFHIGMGVVLALGVETVGNIPN 426
+HCH++ H +GM V L L + G IP
Sbjct: 249 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 276
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 397
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 231 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 285
Query: 398 FHCHIEPHFHIGMGVVLALGVETVGNIPN 426
+HCH++ H +GM V L L + G IP
Sbjct: 286 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 313
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 397
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 190 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 244
Query: 398 FHCHIEPHFHIGMGVVLALGVETVGNIPN 426
+HCH++ H +GM V L L + G IP
Sbjct: 245 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 272
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 335 SEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPG 394
S H +HLHGH W+ R + ++ D + +G+ + PG
Sbjct: 209 SNFHTFHLHGHR-WLDNRTGMRTSEYDPSPLIDIKDLNPGVS----FGFQVIAGEGVGPG 263
Query: 395 AWAFHCHIEPHFHIGM 410
W +HCH++ H +GM
Sbjct: 264 MWMYHCHVQNHSDMGM 279
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 338 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 397
H +HLHGH W R G T D+ +G+ + GAW
Sbjct: 196 HTFHLHGHR-WADNR-TGMLTGPDDPSQVIDNKI---CGPADSFGFQVIAGEGVGAGAWM 250
Query: 398 FHCHIEPHFHIGMGVVLALGVETVGNIPN 426
+HCH++ H +GM V L L + G IP
Sbjct: 251 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 278
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 266 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 266 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|1WSA|A Chain A, Structure Of L-Asparaginase Ii Precursor
pdb|1WSA|B Chain B, Structure Of L-Asparaginase Ii Precursor
Length = 330
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 297
R T LNT +N F P T +G++ YG + F Q+ P ++E+D+
Sbjct: 162 REATKLNT-TAVNAFAS----------PNTGKIGTVYYGKVEYFTQSVRPHTLASEFDIS 210
Query: 298 K 298
K
Sbjct: 211 K 211
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 375 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 417
T +FP+ + +NPG W CH + GM +L +
Sbjct: 667 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 709
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 375 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 417
T +FP+ + +NPG W CH + GM +L +
Sbjct: 668 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 710
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 443 QN 444
QN
Sbjct: 490 QN 491
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 443 QN 444
QN
Sbjct: 490 QN 491
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 266 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSVGSELDVMAPGVSIQSTLPGGTY 214
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 443 QN 444
QN
Sbjct: 490 QN 491
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 443 QN 444
QN
Sbjct: 490 QN 491
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 443 QN 444
QN
Sbjct: 490 QN 491
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 383 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 442
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 446 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 493
Query: 443 QN 444
QN
Sbjct: 494 QN 495
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 266 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|4G1G|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1G|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
Length = 364
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 295 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 336
DV K P A GS +Y L LN T+DV + + + +LS+
Sbjct: 185 DVYKIPTAALKVSGSSLYNLALNVTIDVEVDPKSPLVKSLSK 226
>pdb|3NVS|A Chain A, 1.02 Angstrom Resolution Crystal Structure Of
3-Phosphoshikimate 1- Carboxyvinyltransferase From
Vibrio Cholerae In Complex With Shikimate-3-Phosphate
(Partially Photolyzed) And Glyphosate
Length = 450
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 189 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 248
L + + + L P + + SKS SN+ L T L + ++
Sbjct: 18 LYFQSNAMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHM 77
Query: 249 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 308
+N TK +N L ++ GL AF P E F P+ A LG
Sbjct: 78 LNALTKLGVN---YRLSADKTTCEVE-GLGQAFHTTQPLELFLGNAGTAMRPLAAALCLG 133
Query: 309 SGVYML 314
G Y+L
Sbjct: 134 QGDYVL 139
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 266 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1ZO2|A Chain A, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
pdb|1ZO2|B Chain B, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
Length = 129
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 234 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 293
T F + ++N N++N F + + P+P GSI + D +G P FS
Sbjct: 48 TQFQGQANIVNKFNSLN-FQRVQFEITRVDCQPSPNNGSIVFVTGDVRIDDGQPLKFSQV 106
Query: 294 YDVMKPPVNANTTLGSGVYMLGL 316
+++M P N + + ++ L L
Sbjct: 107 FNLM-PSGNGGFMIFNDLFRLNL 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,582,978
Number of Sequences: 62578
Number of extensions: 631292
Number of successful extensions: 1432
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1317
Number of HSP's gapped (non-prelim): 85
length of query: 444
length of database: 14,973,337
effective HSP length: 102
effective length of query: 342
effective length of database: 8,590,381
effective search space: 2937910302
effective search space used: 2937910302
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)