Query 013385
Match_columns 444
No_of_seqs 204 out of 1351
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:36:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.8E-81 6.3E-86 653.5 47.9 442 1-443 109-550 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.9E-73 6.6E-78 589.0 38.0 380 1-437 173-567 (580)
3 1zpu_A Iron transport multicop 100.0 4.2E-70 1.4E-74 564.2 39.0 371 1-436 110-505 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 2.6E-69 9E-74 551.9 37.3 362 1-436 114-493 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 2.9E-69 1E-73 551.5 36.5 364 1-435 115-492 (495)
6 2q9o_A Laccase-1; multicopper 100.0 1.9E-68 6.7E-73 555.1 36.6 373 1-437 143-546 (559)
7 1v10_A Laccase; multicopper bl 100.0 1.2E-67 4E-72 545.3 35.9 370 1-441 135-518 (521)
8 1hfu_A Laccase 1; oxidoreducta 100.0 4.6E-67 1.6E-71 539.0 34.6 361 1-437 114-493 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 4.1E-61 1.4E-65 487.3 28.2 300 2-417 122-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 9.1E-59 3.1E-63 478.7 30.1 314 2-418 144-475 (534)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 4.9E-59 1.7E-63 472.7 24.9 301 2-421 125-444 (451)
12 3aw5_A Multicopper oxidase; be 100.0 2.8E-58 9.6E-63 466.5 27.6 303 1-416 112-447 (448)
13 2wsd_A Spore coat protein A; o 100.0 2.2E-57 7.6E-62 468.1 28.9 320 2-418 163-510 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 8E-56 2.7E-60 468.5 29.5 339 1-418 180-591 (612)
15 2g23_A PHS, phenoxazinone synt 100.0 6.8E-55 2.3E-59 453.1 30.9 349 2-428 181-601 (612)
16 3zx1_A Oxidoreductase, putativ 100.0 9E-54 3.1E-58 434.4 27.4 303 2-417 158-480 (481)
17 3od3_A Blue copper oxidase CUE 100.0 5E-53 1.7E-57 428.7 25.6 310 2-416 123-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 1.6E-32 5.5E-37 279.1 19.8 236 97-418 195-433 (447)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 2.5E-31 8.5E-36 294.3 16.2 326 2-419 704-1059(1065)
20 3cg8_A Laccase; oxidoreductase 100.0 1.2E-29 4.1E-34 247.9 17.3 225 95-432 75-319 (343)
21 2zwn_A Two-domain type laccase 100.0 1.4E-29 4.9E-34 247.5 17.3 229 97-415 35-274 (339)
22 2r7e_A Coagulation factor VIII 100.0 1.6E-29 5.4E-34 269.4 13.2 138 2-175 168-313 (742)
23 3gdc_A Multicopper oxidase; be 100.0 1.5E-28 5E-33 234.9 16.5 217 97-416 66-286 (288)
24 3g5w_A Multicopper oxidase typ 100.0 1.8E-28 6.3E-33 237.2 13.3 231 97-415 34-273 (318)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 9.2E-28 3.2E-32 265.8 19.2 156 2-193 188-356 (1065)
26 3t9w_A Small laccase, multi-co 100.0 1.4E-27 4.7E-32 229.0 17.9 217 93-419 54-288 (299)
27 3kw8_A Laccase, putative coppe 99.9 1.3E-27 4.5E-32 226.9 16.1 215 95-419 34-266 (276)
28 3tas_A Small laccase, multi-co 99.9 3.4E-26 1.2E-30 221.0 22.7 216 93-418 38-271 (313)
29 1kbv_A ANIA, major outer membr 99.9 1.5E-24 5.2E-29 210.8 13.2 165 2-194 143-308 (327)
30 1sdd_A Coagulation factor V; c 99.9 1.3E-25 4.5E-30 216.3 1.0 226 97-418 60-300 (306)
31 1sdd_B Coagulation factor V; c 99.9 2.7E-23 9.3E-28 220.1 17.0 245 94-417 66-326 (647)
32 3g5w_A Multicopper oxidase typ 99.9 5.7E-22 1.9E-26 191.6 17.2 159 4-194 114-277 (318)
33 2zoo_A Probable nitrite reduct 99.9 4.5E-23 1.5E-27 209.1 9.5 166 2-195 133-299 (442)
34 2zwn_A Two-domain type laccase 99.9 4.8E-21 1.6E-25 187.1 22.1 161 2-194 112-278 (339)
35 1kbv_A ANIA, major outer membr 99.9 4.5E-21 1.5E-25 186.3 18.6 233 97-417 70-306 (327)
36 2r7e_B Coagulation factor VIII 99.9 8.6E-23 2.9E-27 217.9 4.0 85 312-416 370-454 (770)
37 2bw4_A Copper-containing nitri 99.9 1.7E-20 5.8E-25 183.6 19.9 88 312-417 233-323 (340)
38 1mzy_A Copper-containing nitri 99.8 2.2E-19 7.5E-24 175.1 19.5 88 312-417 227-317 (333)
39 1oe1_A Dissimilatory copper-co 99.8 2.4E-20 8.2E-25 182.2 12.7 164 2-194 139-319 (336)
40 1mzy_A Copper-containing nitri 99.8 4.1E-19 1.4E-23 173.2 14.9 160 2-193 139-318 (333)
41 2r7e_A Coagulation factor VIII 99.8 5.7E-21 1.9E-25 203.6 1.6 243 94-417 72-328 (742)
42 2bw4_A Copper-containing nitri 99.8 2.2E-19 7.4E-24 175.7 9.6 163 2-193 145-324 (340)
43 2dv6_A Nitrite reductase; elec 99.8 3.5E-18 1.2E-22 173.4 16.4 163 2-193 268-433 (447)
44 2zoo_A Probable nitrite reduct 99.7 3.8E-17 1.3E-21 165.5 19.8 233 97-416 60-295 (442)
45 1oe1_A Dissimilatory copper-co 99.7 5.5E-17 1.9E-21 158.3 20.2 90 311-418 226-318 (336)
46 1sdd_B Coagulation factor V; c 99.7 2E-17 6.9E-22 175.1 14.0 140 2-175 162-311 (647)
47 3gdc_A Multicopper oxidase; be 99.7 4.9E-17 1.7E-21 155.0 14.5 129 2-174 141-271 (288)
48 3tas_A Small laccase, multi-co 99.7 3.5E-16 1.2E-20 150.9 12.2 119 2-175 133-255 (313)
49 1sdd_A Coagulation factor V; c 99.6 2E-17 6.7E-22 159.2 0.4 128 2-175 153-284 (306)
50 3kw8_A Laccase, putative coppe 99.6 6.3E-15 2.1E-19 139.5 12.4 119 2-176 127-250 (276)
51 3t9w_A Small laccase, multi-co 99.6 6.4E-15 2.2E-19 140.9 11.8 119 2-175 149-271 (299)
52 3cg8_A Laccase; oxidoreductase 99.5 4.1E-14 1.4E-18 137.9 12.8 133 2-192 168-305 (343)
53 2r7e_B Coagulation factor VIII 99.5 5.1E-15 1.7E-19 158.1 4.3 140 2-175 284-440 (770)
54 2xu9_A Laccase; oxidoreductase 99.3 1.9E-11 6.6E-16 123.2 13.4 202 97-404 47-266 (439)
55 3cvb_A Plastocyanin; cupredoxi 99.2 6E-11 2E-15 95.0 8.6 84 311-417 20-104 (105)
56 2aan_A Auracyanin A; cupredoxi 99.2 4.8E-11 1.7E-15 100.7 7.3 94 311-416 36-138 (139)
57 1aoz_A Ascorbate oxidase; oxid 99.1 2.1E-09 7.1E-14 111.5 16.9 248 97-404 34-284 (552)
58 2uxt_A Protein SUFI, SUFI; oxi 99.0 1.7E-09 5.7E-14 109.3 14.1 205 97-404 50-272 (451)
59 3pxl_A Laccase; 4-copper prote 99.0 4.2E-09 1.4E-13 107.3 16.5 224 97-402 34-263 (499)
60 1v10_A Laccase; multicopper bl 99.0 4.4E-09 1.5E-13 108.2 15.6 230 97-403 55-290 (521)
61 3t6v_A Laccase; beta barrel, o 99.0 3.9E-09 1.3E-13 107.6 14.7 226 97-402 35-266 (495)
62 1hfu_A Laccase 1; oxidoreducta 99.0 5.1E-09 1.8E-13 107.2 14.6 224 97-403 34-263 (503)
63 3sqr_A Laccase; multicopper ox 98.9 2.5E-08 8.6E-13 103.1 18.3 232 97-403 98-331 (580)
64 2q9o_A Laccase-1; multicopper 98.9 1.5E-08 5.1E-13 105.0 16.2 223 97-402 67-292 (559)
65 2gim_A Plastocyanin; beta shee 98.9 3.8E-09 1.3E-13 84.5 8.5 84 311-417 21-105 (106)
66 1qhq_A Protein (auracyanin); e 98.8 5.2E-09 1.8E-13 88.3 7.5 96 311-417 34-139 (140)
67 1zpu_A Iron transport multicop 98.8 5.5E-08 1.9E-12 100.2 15.1 201 97-403 34-257 (534)
68 3zx1_A Oxidoreductase, putativ 98.7 1.2E-07 4.1E-12 96.1 14.6 213 97-403 82-298 (481)
69 1pcs_A Plastocyanin; electron 98.7 1.8E-08 6E-13 79.4 5.6 78 311-416 20-97 (98)
70 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.6E-12 74.8 8.5 79 311-416 19-97 (98)
71 3aw5_A Multicopper oxidase; be 98.6 2E-07 6.8E-12 94.0 12.2 210 97-401 38-259 (448)
72 1bxv_A Plastocyanin; copper pr 98.6 1.9E-07 6.4E-12 72.2 8.0 71 311-416 20-90 (91)
73 1b3i_A PETE protein, protein ( 98.5 5.7E-08 1.9E-12 76.3 4.8 77 311-416 20-96 (97)
74 1byp_A Protein (plastocyanin); 98.4 5.8E-07 2E-11 70.7 8.0 81 311-416 18-98 (99)
75 1iby_A Nitrosocyanin; RED copp 98.4 1.2E-06 3.9E-11 70.7 9.2 72 311-416 39-110 (112)
76 3abg_A Bilirubin oxidase; clea 98.4 3.3E-06 1.1E-10 86.8 13.4 70 97-176 69-138 (534)
77 4hci_A Cupredoxin 1; structura 98.3 3.4E-06 1.1E-10 66.4 9.5 71 311-416 29-99 (100)
78 1kdj_A Plastocyanin; electron 98.3 1.2E-06 4.1E-11 69.2 6.9 81 311-416 18-101 (102)
79 2wsd_A Spore coat protein A; o 98.2 1.1E-05 3.7E-10 82.7 12.5 72 311-398 242-315 (513)
80 1plc_A Plastocyanin; electron 98.1 5.4E-06 1.8E-10 65.1 6.5 81 311-416 18-98 (99)
81 3od3_A Blue copper oxidase CUE 98.0 1.5E-05 5.2E-10 80.7 9.9 76 98-174 393-473 (488)
82 2cal_A Rusticyanin; iron respi 98.0 1.7E-05 5.9E-10 67.5 8.7 82 311-416 62-153 (154)
83 2ov0_A Amicyanin; beta-sandwic 97.8 5.7E-05 1.9E-09 59.8 8.1 71 311-416 34-104 (105)
84 1fwx_A Nitrous oxide reductase 97.8 5.9E-05 2E-09 77.5 9.7 77 310-418 513-592 (595)
85 2g23_A PHS, phenoxazinone synt 97.6 0.0002 6.8E-09 74.4 9.9 77 97-175 472-575 (612)
86 3gyr_A PHS, phenoxazinone synt 97.4 0.00092 3.2E-08 69.9 12.9 81 312-397 267-350 (612)
87 1iuz_A Plastocyanin; electron 97.2 0.002 6.7E-08 50.0 9.0 79 311-416 19-97 (98)
88 2aan_A Auracyanin A; cupredoxi 97.2 0.00071 2.4E-08 56.3 6.9 70 96-174 34-124 (139)
89 3ef4_A Pseudoazurin, blue copp 97.1 0.0012 4E-08 53.7 7.0 73 311-418 23-95 (124)
90 3erx_A Pseudoazurin; copper pr 97.0 0.002 6.7E-08 52.4 7.7 73 311-418 22-94 (123)
91 1id2_A Amicyanin; beta barrel, 97.0 0.0025 8.6E-08 50.3 8.1 71 311-416 35-105 (106)
92 3tu6_A Pseudoazurin (blue copp 96.9 0.0013 4.3E-08 53.8 5.9 73 311-418 24-96 (127)
93 3c75_A Amicyanin; copper prote 96.8 0.0044 1.5E-07 51.0 8.1 71 311-416 61-131 (132)
94 1iby_A Nitrosocyanin; RED copp 96.8 0.0067 2.3E-07 48.2 9.0 60 96-174 37-96 (112)
95 1cuo_A Protein (azurin ISO-2); 96.2 0.025 8.4E-07 46.2 9.1 94 312-416 20-127 (129)
96 1paz_A Pseudoazurin precursor; 96.2 0.016 5.4E-07 47.0 7.6 36 379-418 59-94 (123)
97 3cvb_A Plastocyanin; cupredoxi 96.1 0.0072 2.4E-07 47.3 5.1 73 96-174 18-90 (105)
98 1nwp_A Azurin; electron transp 96.0 0.01 3.5E-07 48.4 5.9 76 96-172 17-111 (128)
99 4hci_A Cupredoxin 1; structura 96.0 0.039 1.3E-06 42.7 8.8 58 97-173 28-85 (100)
100 2ccw_A Azurin II, AZN-2; elect 95.9 0.013 4.3E-07 47.9 6.2 77 96-173 17-112 (129)
101 1pmy_A Pseudoazurin; electron 95.9 0.019 6.3E-07 46.5 6.7 37 378-418 58-94 (123)
102 2iaa_C Azurin; quinoprotein, t 95.8 0.016 5.3E-07 47.3 6.2 77 96-172 16-110 (128)
103 3ay2_A Lipid modified azurin p 95.8 0.02 6.9E-07 48.8 7.1 94 312-416 60-165 (167)
104 2cua_A Protein (CUA); CUA cent 95.7 0.058 2E-06 44.4 9.2 69 312-416 62-133 (135)
105 3sbq_A Nitrous-oxide reductase 95.6 0.041 1.4E-06 55.8 9.4 78 311-418 559-637 (638)
106 1qhq_A Protein (auracyanin); e 95.3 0.041 1.4E-06 45.4 7.0 69 96-174 32-123 (140)
107 3ay2_A Lipid modified azurin p 95.2 0.023 7.8E-07 48.5 5.3 74 97-173 58-150 (167)
108 2ccw_A Azurin II, AZN-2; elect 95.1 0.12 4.1E-06 42.0 9.2 94 312-416 20-127 (129)
109 3fsa_A Azurin; copper, cupredo 95.1 0.022 7.4E-07 46.0 4.4 76 97-172 18-111 (125)
110 2ux6_A Pseudoazurin; type-1 co 94.9 0.077 2.6E-06 42.8 7.4 34 379-418 59-92 (122)
111 2cal_A Rusticyanin; iron respi 94.5 0.042 1.4E-06 46.3 5.2 74 97-174 61-138 (154)
112 1cuo_A Protein (azurin ISO-2); 94.5 0.026 8.8E-07 46.1 3.6 75 96-173 17-112 (129)
113 2iaa_C Azurin; quinoprotein, t 94.2 0.19 6.7E-06 40.7 8.2 94 312-416 19-126 (128)
114 2gim_A Plastocyanin; beta shee 94.1 0.027 9.3E-07 44.0 2.9 72 96-173 19-90 (106)
115 1nwp_A Azurin; electron transp 93.8 0.23 7.9E-06 40.3 7.9 94 312-416 20-127 (128)
116 3s8f_B Cytochrome C oxidase su 93.8 0.35 1.2E-05 41.2 9.3 71 312-416 95-166 (168)
117 3fsa_A Azurin; copper, cupredo 93.3 0.34 1.2E-05 38.9 8.0 91 312-416 20-124 (125)
118 2plt_A Plastocyanin; electron 92.9 0.37 1.3E-05 36.7 7.5 68 96-174 17-84 (98)
119 1kdj_A Plastocyanin; electron 92.5 0.12 4E-06 39.9 4.1 65 96-174 16-88 (102)
120 1pcs_A Plastocyanin; electron 92.1 0.31 1.1E-05 37.1 6.1 67 96-174 18-84 (98)
121 1bxv_A Plastocyanin; copper pr 91.8 0.64 2.2E-05 34.6 7.6 60 96-174 18-77 (91)
122 1fwx_A Nitrous oxide reductase 91.3 0.71 2.4E-05 47.4 9.4 62 95-174 511-574 (595)
123 1b3i_A PETE protein, protein ( 90.7 0.45 1.5E-05 36.1 5.7 64 96-174 18-83 (97)
124 1iuz_A Plastocyanin; electron 90.3 0.82 2.8E-05 34.8 7.0 67 96-173 17-83 (98)
125 2ov0_A Amicyanin; beta-sandwic 89.2 0.7 2.4E-05 35.8 5.8 62 96-174 32-93 (105)
126 3isy_A Bsupi, intracellular pr 86.3 4.9 0.00017 31.9 9.0 75 103-178 16-104 (120)
127 1plc_A Plastocyanin; electron 85.3 1.2 4E-05 33.9 4.9 68 96-174 16-85 (99)
128 3sbq_A Nitrous-oxide reductase 83.3 4.8 0.00016 40.9 9.5 61 96-174 557-619 (638)
129 1byp_A Protein (plastocyanin); 83.2 1.1 3.7E-05 34.0 3.9 68 96-174 16-85 (99)
130 1id2_A Amicyanin; beta barrel, 81.8 2.3 7.9E-05 32.8 5.4 61 96-173 33-93 (106)
131 3erx_A Pseudoazurin; copper pr 81.1 0.99 3.4E-05 36.2 3.0 74 96-192 20-93 (123)
132 2cua_A Protein (CUA); CUA cent 80.8 6.3 0.00021 31.9 7.9 56 98-173 61-116 (135)
133 3c75_A Amicyanin; copper prote 80.6 3 0.0001 33.7 5.9 61 96-173 59-119 (132)
134 1cyx_A CYOA; electron transpor 76.8 3.2 0.00011 36.2 5.2 69 312-414 43-112 (205)
135 3s8f_B Cytochrome C oxidase su 75.1 11 0.00039 31.7 8.0 57 98-174 94-150 (168)
136 2r39_A FIXG-related protein; s 73.0 10 0.00035 29.8 6.9 46 106-161 34-81 (118)
137 1paz_A Pseudoazurin precursor; 70.5 2.9 9.9E-05 33.4 3.1 59 96-173 20-78 (123)
138 3tu6_A Pseudoazurin (blue copp 70.3 1.8 6.2E-05 34.8 1.8 60 96-174 22-81 (127)
139 2gsm_B Cytochrome C oxidase su 69.6 6.1 0.00021 36.0 5.4 69 312-414 173-242 (262)
140 2ux6_A Pseudoazurin; type-1 co 66.0 4.6 0.00016 32.1 3.4 72 96-192 20-91 (122)
141 1pmy_A Pseudoazurin; electron 66.0 4.5 0.00015 32.2 3.3 74 96-192 20-93 (123)
142 3hb3_B Cytochrome C oxidase su 62.3 20 0.0007 33.1 7.5 70 312-415 191-261 (298)
143 1v54_B Cytochrome C oxidase po 58.1 13 0.00044 33.0 5.2 70 311-414 141-211 (227)
144 3ef4_A Pseudoazurin, blue copp 51.3 7 0.00024 31.2 2.1 59 96-173 21-79 (124)
145 3idu_A Uncharacterized protein 48.1 1E+02 0.0034 24.4 10.9 69 100-177 28-98 (127)
146 2wtp_A ORF131 protein, CZCE; m 43.6 10 0.00034 30.4 1.8 24 98-121 72-95 (131)
147 1fft_B Ubiquinol oxidase; elec 36.3 46 0.0016 31.0 5.4 70 312-415 153-223 (315)
148 3f6z_B MLIC, putative uncharac 27.9 1.8E+02 0.0061 21.9 6.6 46 98-156 22-68 (101)
149 1cyx_A CYOA; electron transpor 27.1 1.2E+02 0.004 26.3 6.0 57 98-174 42-98 (205)
150 3q48_A Chaperone CUPB2; IG fol 21.6 73 0.0025 28.7 3.8 22 95-116 83-104 (257)
151 3p6b_A Cellulose 1,4-beta-cell 21.1 3.9E+02 0.013 22.8 8.7 58 98-163 97-160 (205)
152 4ay0_A Chaperone protein CAF1M 21.1 1.3E+02 0.0045 26.2 5.3 22 95-116 64-85 (218)
153 2yev_B Cytochrome C oxidase su 25.1 23 0.00077 33.5 0.0 64 312-409 143-206 (337)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.8e-81 Score=653.52 Aligned_cols=442 Identities=69% Similarity=1.252 Sum_probs=338.7
Q ss_pred CccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
+|+++||+|+|||+++++...|+++|+|++|+|+||+++...+++..+...+..+.+.++++||||++.++|+....+.
T Consensus 109 ~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~- 187 (552)
T 1aoz_A 109 MQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYD- 187 (552)
T ss_dssp TTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGC-
T ss_pred hHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccc-
Confidence 5899999999999999765678888999999999999999888776655433333457899999999999998633211
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEe
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~ 160 (444)
.....|+..++..+.++++.|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||+|+
T Consensus 188 ~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~ 267 (552)
T 1aoz_A 188 SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLIT 267 (552)
T ss_dssp TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEE
T ss_pred cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEE
Confidence 11234653323344566899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceEEEEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEE
Q 013385 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL 240 (444)
Q Consensus 161 ~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 240 (444)
+++.++|+|||++.............|+|+|.++.....+....|..|.+++......+............++...++++
T Consensus 268 ~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 347 (552)
T 1aoz_A 268 TDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRI 347 (552)
T ss_dssp CCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEE
T ss_pred cCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEE
Confidence 95435789999998765323456789999998654322222233344444443222111111111111122345678888
Q ss_pred EEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEE
Q 013385 241 TLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTV 320 (444)
Q Consensus 241 ~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 320 (444)
.+....+...+...|+|||++|..|..|+|.+...++++.|+.+.++..+...|+....+.+...+.++.++.++.|++|
T Consensus 348 ~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v 427 (552)
T 1aoz_A 348 FLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427 (552)
T ss_dssp EEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEE
T ss_pred EEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEE
Confidence 88776554455678999999999999999998888777766544433222112232222222234556778999999999
Q ss_pred EEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEec
Q 013385 321 DVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHC 400 (444)
Q Consensus 321 ~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HC 400 (444)
+|+|+|.+.+.++....||||||||+||||++|.|.|++.++..+|+.+|+|||||.|+++||++|||+|||||.|+|||
T Consensus 428 ~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HC 507 (552)
T 1aoz_A 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHC 507 (552)
T ss_dssp EEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEE
T ss_pred EEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEe
Confidence 99999987542111337999999999999999999998766678999999999999999999999999999999999999
Q ss_pred cChhhHhcccEEEEecccccccCCCCCCcccCcccccccCCCC
Q 013385 401 HIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQ 443 (444)
Q Consensus 401 Hi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~ 443 (444)
||+||++.|||++|.|++++++++|++++.|+.++.-+++++-
T Consensus 508 Hi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~ 550 (552)
T 1aoz_A 508 HIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPK 550 (552)
T ss_dssp SSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCS
T ss_pred eehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCCC
Confidence 9999999999999999999999999999999999987777754
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.9e-73 Score=588.96 Aligned_cols=380 Identities=25% Similarity=0.402 Sum_probs=290.2
Q ss_pred CccccceeeeEEEECCCCCCCCCCCCcce-EEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCccccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFS 79 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~~~D~e~-~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~ 79 (444)
+|+++||+|+|||+++++ ..||.|. +|+|+||+++...+++......+ ++++|++||||++.++|+...
T Consensus 173 ~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~~---~~~~d~~liNG~~~~~c~~~~--- 242 (580)
T 3sqr_A 173 LQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARLGA---PPALENTLMNGTNTFDCSAST--- 242 (580)
T ss_dssp TGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTTSC---CCCBSEEEETTBCCCCCTTCC---
T ss_pred ccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhccC---CCCCceEEECCcccCCCcccc---
Confidence 599999999999998854 4688888 99999999999988887766533 568999999999999887521
Q ss_pred CCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEE
Q 013385 80 NGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 80 ~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v 159 (444)
...|. .....+++.|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|
T Consensus 243 ---~~~~~----~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv 315 (580)
T 3sqr_A 243 ---DPNCV----GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIV 315 (580)
T ss_dssp ---CTTBC----CCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEE
T ss_pred ---ccccc----cCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEE
Confidence 12343 23345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEecCCCC---CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccccc-ccccccCCCCCCCCCc
Q 013385 160 TTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSF-SNKIFALMGSPKPPTN 235 (444)
Q Consensus 160 ~~~~~~~g~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~-~~~~~~~~~~~~~p~~ 235 (444)
++++ ++|+||||+.....|. ......|||+|.++... . |..+.+......... ...+....+ ...+..
T Consensus 316 ~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~-~-----P~~~~~~~~~~~~~~~~~~L~P~~~-~~~~~~ 387 (580)
T 3sqr_A 316 EANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA-N-----PTSVGTTPRGTCEDEPVASLVPHLA-LDVGGY 387 (580)
T ss_dssp ECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC-C-----CCCCCCCCCCCSCCSCGGGCCBSSC-CBCCSE
T ss_pred EeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC-C-----CCCCCCCccchhhcccccccccCCC-CCCCCc
Confidence 9998 5789999998876663 22357999999854321 1 112222211111110 012222221 122333
Q ss_pred cceEEEEEecccccCCeEEEEecCccccC-CCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEc
Q 013385 236 FHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 314 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (444)
.+.++.+... ..+...|+|||++|.. +..|.|..+..+. ..|. .+ ..++.+
T Consensus 388 ~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-~~~~---------~~---------------~~~~~~ 439 (580)
T 3sqr_A 388 SLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-TIFP---------TE---------------YNVVAL 439 (580)
T ss_dssp EEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-CCCC---------GG---------------GCEEEE
T ss_pred cceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC-ccCC---------CC---------------cceeec
Confidence 4445544442 2356789999999975 5888887665331 1110 01 123444
Q ss_pred ----cCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch-hhcccCCCCCCccceEEeCCCcEEEEEEE
Q 013385 315 ----GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 315 ----~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-~~~~~n~~~p~~rDTv~v~~~g~v~irf~ 389 (444)
+.|++|||+|+|.+.. ...||||||||+||||++|.|.|+++ ++..+|+.||++|||+.|+++||++|||+
T Consensus 440 ~~~~~~~~~VeiVi~n~~~~----~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ 515 (580)
T 3sqr_A 440 EQTNANEEWVVYVIEDLTGF----GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFK 515 (580)
T ss_dssp CC----CCEEEEEEEECSSS----CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEE
T ss_pred ccccCCCcEEEEEEeCCCcc----ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEE
Confidence 4699999999998722 12899999999999999999999876 56789999999999999999999999999
Q ss_pred cCCceeeEEeccChhhHhcccEEEEecccccccC---CCCC-CcccCccccc
Q 013385 390 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGKR 437 (444)
Q Consensus 390 adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~~ 437 (444)
+||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|..|..+
T Consensus 516 adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 516 LDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp SCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHHhhh
Confidence 9999999999999999999999999999998876 3444 4789988763
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-70 Score=564.17 Aligned_cols=371 Identities=26% Similarity=0.388 Sum_probs=278.1
Q ss_pred CccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCC--CCcCCCCCceEEcCCCCCCCcccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRP--LRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~--~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
.|+++||+|+|||+++++ |+.||+|++|+|+||+++...++...+.+.. ....+.++++||||+..+
T Consensus 110 ~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~~-------- 178 (534)
T 1zpu_A 110 GQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL-------- 178 (534)
T ss_dssp SGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSSC--------
T ss_pred ccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCce--------
Confidence 489999999999999864 6788999999999999999988876654321 112567899999999764
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVL 158 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~ 158 (444)
++.|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||+
T Consensus 179 -------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvl 239 (534)
T 1zpu_A 179 -------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVL 239 (534)
T ss_dssp -------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEE
T ss_pred -------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEE
Confidence 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcceEEEEEecCCCC------CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCC
Q 013385 159 LTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP 232 (444)
Q Consensus 159 v~~~~~~~g~y~i~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (444)
|++++.+.++|||++.....+. ......++|+|.++... +. + +....+.. .... ..+..... ...
T Consensus 240 v~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~--p~-~-~~~~~~~~--~~~~--~~l~p~~~-~~~ 310 (534)
T 1zpu_A 240 VHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL--PT-Q-NYVDSIDN--FLDD--FYLQPYEK-EAI 310 (534)
T ss_dssp EECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB--CC-C-CCCSCSSC--SCCG--GGCCBSSC-CCC
T ss_pred EEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC--CC-C-Cccccccc--cccc--ccceeCCC-CCC
Confidence 9998755689999998754321 23456799999854211 10 0 00111110 0000 11222111 122
Q ss_pred CCccceEEEEEecccc-cCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceE
Q 013385 233 PTNFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 311 (444)
Q Consensus 233 p~~~~~~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 311 (444)
+..+++++.+...... .++...|+|||++|..|..|.|...... +.+. ..+..+ ..++.+
T Consensus 311 ~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~--~~~~~~---------------~~~~~~ 371 (534)
T 1zpu_A 311 YGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA--NNSEIY---------------GSNTHT 371 (534)
T ss_dssp CCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT--TCGGGG---------------CSSSCE
T ss_pred CCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc--CCCccc---------------CCCceE
Confidence 2456788877665432 2445679999999999999988665421 1110 000000 112346
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCC----------CCCchhhcccCCCCCCccceEEeCCC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG----------KFTKEDEKKFNLKNPPLKNTAVIFPY 381 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~~~~~n~~~p~~rDTv~v~~~ 381 (444)
+.++.|++|+|+|+|.+.+ .||||||||+||||+++.+ .|++.+... ...+|.|||||.|+++
T Consensus 372 ~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pg 444 (534)
T 1zpu_A 372 FILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQ 444 (534)
T ss_dssp EEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTT
T ss_pred EEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCC
Confidence 8999999999999998876 9999999999999999864 343222122 2468999999999999
Q ss_pred cEEEEEEEcCCceeeEEeccChhhHhcccEEEEecccccccC-----CCC-CCcccCcccc
Q 013385 382 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPN-QALACGLTGK 436 (444)
Q Consensus 382 g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~-----~P~-~~~~C~~~~~ 436 (444)
||++|||+|||||.|+|||||+||++.|||++|.|+++++++ +|+ ..+.|..+..
T Consensus 445 g~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~ 505 (534)
T 1zpu_A 445 SNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQSCSV 505 (534)
T ss_dssp CEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHHTTC
T ss_pred CEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhccCC
Confidence 999999999999999999999999999999999999987753 354 4578977754
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.6e-69 Score=551.86 Aligned_cols=362 Identities=26% Similarity=0.477 Sum_probs=270.8
Q ss_pred CccccceeeeEEEECCCCC-CCCCCCC-cceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 1 MQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~-~~p~~~D-~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
.|+++||+|+|||+++++. ..+|++| +|++|+|+||+++...+ .+. .+.++|++||||+++++|..
T Consensus 114 ~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~-------~~~-~p~~~d~~liNG~~~~~~~~---- 181 (499)
T 3pxl_A 114 TQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL-------GPR-FPGGADATLINGKGRAPSDS---- 181 (499)
T ss_dssp TGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-------SCS-SCSSCSEEEETTBCCCTTCT----
T ss_pred hHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-------ccC-CCCCCcEEEECCCCcCCCCC----
Confidence 4899999999999988651 1235554 56899999999987542 111 14578999999999875532
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVL 158 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~ 158 (444)
....+.+.|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+
T Consensus 182 --------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvl 247 (499)
T 3pxl_A 182 --------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFV 247 (499)
T ss_dssp --------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEE
T ss_pred --------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEE
Confidence 233468999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcceEEEEEecCCCCC--CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCC--CC--C
Q 013385 159 LTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS--PK--P 232 (444)
Q Consensus 159 v~~~~~~~g~y~i~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~--~~--~ 232 (444)
|++++ +.|+|||++.....+.. .....|+|+|.++... .+.+ +......... ...+...... +. .
T Consensus 248 v~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~-~p~~-----~~~~~~~~~~--~~~L~p~~~~~~p~~~~ 318 (499)
T 3pxl_A 248 LDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAV-EPTT-----NQTTSVKPLN--EVDLHPLVSTPVPGAPS 318 (499)
T ss_dssp EECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSS-CCCC-----CCCCCSSBCC--GGGCCBSSCCCCSSCSS
T ss_pred EECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCC-CCCC-----CCCCCCcccc--cccccccccccCCCccc
Confidence 99998 56899999987654432 2235799999864321 1111 1111111111 1122222211 11 1
Q ss_pred CCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEE
Q 013385 233 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312 (444)
Q Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (444)
+..+++++.+.+..+ + ..|+|||++|..|..|.|.+...+..... + ....+.++
T Consensus 319 ~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~-----------~~~~~~v~ 372 (499)
T 3pxl_A 319 SGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGAQTAQ-----------D-----------LLPSGSVY 372 (499)
T ss_dssp TTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT-----------T-----------SSSTTSEE
T ss_pred CCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCCcccc-----------c-----------cCCCceeE
Confidence 234677776655432 2 37999999999999998877653321100 0 01123478
Q ss_pred EccCCCEEEEEEEe---CCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCC---CcEEEE
Q 013385 313 MLGLNTTVDVILQN---ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP---YGWTAL 386 (444)
Q Consensus 313 ~~~~g~~v~~vl~N---~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~---~g~v~i 386 (444)
.++.|++|+|+|+| .+.+ .||||||||+|+||+.+ | ...+|+.||++|||+.|++ ++|++|
T Consensus 373 ~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~-g------~~~~n~~~P~~rDtv~v~~~~pg~~~~i 439 (499)
T 3pxl_A 373 VLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSA-G------STVYNYDNPIFRDVVSTGTPAAGDNVTI 439 (499)
T ss_dssp EECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECT-T------CCCCCSSSCCEESEEECCCGGGTCEEEE
T ss_pred EecCCCEEEEEEecCcccCCC------CccceecCCcEEEEecc-C------CcccccCCCCccceEEcCCcCCCcEEEE
Confidence 99999999999994 4444 89999999999999864 2 2347889999999999997 999999
Q ss_pred EEEcCCceeeEEeccChhhHhcccEEEEecccccccC---CCCC-CcccCcccc
Q 013385 387 RFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGK 436 (444)
Q Consensus 387 rf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~ 436 (444)
||+|||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|..|.+
T Consensus 440 rf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~~ 493 (499)
T 3pxl_A 440 RFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCPTYDA 493 (499)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHHT
T ss_pred EEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhhHhhc
Confidence 9999999999999999999999999999999998864 4544 589988865
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.9e-69 Score=551.53 Aligned_cols=364 Identities=26% Similarity=0.438 Sum_probs=270.3
Q ss_pred CccccceeeeEEEECCCCC-CCCCCCC-cceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 1 MQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~-~~p~~~D-~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
.|+++||+|+|||+++++. ..+|++| +|++|+|+||+++...++ .+. .+.++|++||||+++++|..
T Consensus 115 ~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~------~~~-~p~~~d~~liNG~g~~~~~~---- 183 (495)
T 3t6v_A 115 TQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM------GAG-GAITADSTLIDGLGRTHVNV---- 183 (495)
T ss_dssp TGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS------CSS-SCCCCSEEEETTBCCBSSSC----
T ss_pred hHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh------ccC-CCCCCcEEEECCcCcCCCCc----
Confidence 4899999999999988651 1235554 578999999999987542 111 14588999999999875432
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVL 158 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~ 158 (444)
.....+.+.|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+
T Consensus 184 -------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvl 250 (495)
T 3t6v_A 184 -------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFV 250 (495)
T ss_dssp -------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEE
T ss_pred -------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEE
Confidence 0223468999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcceEEEEEecCCCCC--CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCC--CC--C
Q 013385 159 LTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS--PK--P 232 (444)
Q Consensus 159 v~~~~~~~g~y~i~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~--~~--~ 232 (444)
|++++ +.|+||||+.....+.. .....|+|+|.++.... +.+..+.. ...... ...+...... +. .
T Consensus 251 v~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~~----~~~~~~--~~~L~p~~~~~~p~~~~ 322 (495)
T 3t6v_A 251 LNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVASTV----HTKCLI--ETDLHPLSRNGVPGNPH 322 (495)
T ss_dssp EECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCSS----CSSBCC--GGGCCBSSCCCCSSCSS
T ss_pred EECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCCC----Cccccc--cccccccccccCCCccC
Confidence 99998 56899999987544432 22357999998543221 11111100 001111 1122222211 11 1
Q ss_pred CCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEE
Q 013385 233 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 312 (444)
Q Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (444)
+..+++++.+.+..+ + ..|+|||++|..|..|.|.+...+..... + ....+.++
T Consensus 323 ~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~-----------~~~~~~v~ 376 (495)
T 3t6v_A 323 QGGADCNLNLSLGFA---C-GNFVINGVSFTPPTVPVLLQICSGANTAA-----------D-----------LLPSGSVI 376 (495)
T ss_dssp TTCSSEEEECCEEEE---T-TEEEETTBCCCCCSSCHHHHHHTTCCSST-----------T-----------SSSTTSEE
T ss_pred CCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCcchhhhhcCCcCcc-----------c-----------ccCCcceE
Confidence 234677776555332 1 27999999999999998877653321100 0 01123478
Q ss_pred EccCCCEEEEEEE-eCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCC-CcEEEEEEEc
Q 013385 313 MLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP-YGWTALRFVA 390 (444)
Q Consensus 313 ~~~~g~~v~~vl~-N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~-~g~v~irf~a 390 (444)
.++.|++|+|+|+ |...+ .||||||||+|+||+.+ | ...+|+.||++|||+.|++ |+|++|||+|
T Consensus 377 ~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~-g------~~~~n~~~P~~rDtv~v~~~g~~~~irf~a 443 (495)
T 3t6v_A 377 SLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESA-S------NSTSNYDDPIWRDVVSIGGVGDNVTIRFCT 443 (495)
T ss_dssp EECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECT-T------CCCCCSSSCCEESEEECCSTTCEEEEEEEC
T ss_pred EecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecC-C------CCCcccCCCCCccEEEcCCCCcEEEEEEEc
Confidence 9999999999998 55555 89999999999999864 2 2347889999999999997 8999999999
Q ss_pred CCceeeEEeccChhhHhcccEEEEecccccccC---CCCC-CcccCccc
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTG 435 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~ 435 (444)
||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|..|.
T Consensus 444 dnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 444 DNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 999999999999999999999999999998864 4544 57898764
No 6
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.9e-68 Score=555.06 Aligned_cols=373 Identities=23% Similarity=0.387 Sum_probs=277.6
Q ss_pred CccccceeeeEEEECCCCCCCCCCCCcce-EEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCccccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFS 79 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~~~D~e~-~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~ 79 (444)
.|+++||+|+|||++++. ..||.|. +|+|+||+++...+++.... .+ . .+.++++||||++.++|..
T Consensus 143 ~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~~~~~-~~-~-~~~~d~~liNG~~~~~~~~----- 210 (559)
T 2q9o_A 143 AQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLVHFTQ-NN-A-PPFSDNVLINGTAVNPNTG----- 210 (559)
T ss_dssp TGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHT-TS-C-CCCBSEEEETTBCBCTTTC-----
T ss_pred chhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHhhhhh-cC-C-CCccceeEECCccccCcCC-----
Confidence 589999999999998854 4688887 99999999999888765443 11 2 4578999999999876642
Q ss_pred CCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEE
Q 013385 80 NGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 80 ~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v 159 (444)
....+.+.|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++.|.|++||||||+|
T Consensus 211 -------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv 277 (559)
T 2q9o_A 211 -------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI 277 (559)
T ss_dssp -------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEE
T ss_pred -------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEE
Confidence 1234589999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEe--cCCCC--CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCC--CCC-
Q 013385 160 TTNQDPSYNYWISAGV--RGRKP--ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS--PKP- 232 (444)
Q Consensus 160 ~~~~~~~g~y~i~~~~--~~~~~--~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~--~~~- 232 (444)
++++ ++|+|||++.. ...|. ......++|+|.++... .|.... .+. .+...... ..+....+. +.+
T Consensus 278 ~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~~~~--~~~-~~~~~~~~--~~l~p~~~~~~p~~~ 350 (559)
T 2q9o_A 278 DASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPTDEG--TPP-VDHQCLDT--LDVRPVVPRSVPVNS 350 (559)
T ss_dssp ECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCCCCC--CCC-CCCTTCCC--SCCCBSSCCBCCCTT
T ss_pred ECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCCCCC--CcC-CCcccccc--cccccCCCCCCCCcc
Confidence 9988 57899999987 44443 23456899999854321 111110 000 01000000 111111111 111
Q ss_pred -CCccceEEEEEecccccCCeEEEEecCccccCC-CCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccce
Q 013385 233 -PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG 310 (444)
Q Consensus 233 -p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p-~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 310 (444)
....+.++.+.... ...+...|+|||++|..+ ..|+|.....+.. .|. .+..
T Consensus 351 ~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~-~~~------------------------~~~~ 404 (559)
T 2q9o_A 351 FVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT-SYP------------------------VSDN 404 (559)
T ss_dssp CCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-CCC------------------------GGGC
T ss_pred cccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-cCC------------------------CCce
Confidence 11123455544321 112456899999999764 6787765543321 110 1122
Q ss_pred EEEccC-CCEEEEEEEeCC----cCCCCCCCCCceeecccceEEEeecC---------CCCCch-hhcccCCCCCCccce
Q 013385 311 VYMLGL-NTTVDVILQNAN----AIRPNLSEIHPWHLHGHDFWVLGRGE---------GKFTKE-DEKKFNLKNPPLKNT 375 (444)
Q Consensus 311 ~~~~~~-g~~v~~vl~N~~----~~~~~~~~~HP~HlHG~~F~Vl~~g~---------g~~~~~-~~~~~n~~~p~~rDT 375 (444)
++.++. +++++|+|+|.+ .+ .||||||||+||||+++. |.|++. ++..+|+.+|+||||
T Consensus 405 ~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDT 478 (559)
T 2q9o_A 405 IVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDT 478 (559)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESE
T ss_pred EEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccce
Confidence 466664 578888999865 45 899999999999999987 788764 457789999999999
Q ss_pred EEeCCCcEEEEEEEcCCceeeEEeccChhhHhcccEEEEecccccccCC-----CC-CCcccCccccc
Q 013385 376 AVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----PN-QALACGLTGKR 437 (444)
Q Consensus 376 v~v~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~-----P~-~~~~C~~~~~~ 437 (444)
|.|+++||++|||+|||||.|+|||||+||++.|||++|+|++++++++ |+ ..+.|+.|+..
T Consensus 479 V~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C~~~~~~ 546 (559)
T 2q9o_A 479 TMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEWRAY 546 (559)
T ss_dssp EEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccCCchhhhhhccccccc
Confidence 9999999999999999999999999999999999999999999887653 43 46899999874
No 7
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.2e-67 Score=545.25 Aligned_cols=370 Identities=26% Similarity=0.447 Sum_probs=268.7
Q ss_pred CccccceeeeEEEECCCCCCCC--CCCC-cceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEP--FHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAH 77 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p--~~~D-~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~ 77 (444)
.|+++||+|+|||+++++ +.+ |+.| +|++|+|+||+++...++... .+.. .+.+|++||||++.++|..
T Consensus 135 ~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~---~~~~-~~~~d~~liNG~~~~~~~~--- 206 (521)
T 1v10_A 135 TQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSLSTVLFPN---PNKA-PPAPDTTLINGLGRNSANP--- 206 (521)
T ss_dssp TGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSCCC----------CC-CSCCSEEEETTBCCCSSCG---
T ss_pred CchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCCHHHHhhc---cCCC-CCCCCEEEECCcccCCCCC---
Confidence 489999999999999864 223 3333 689999999999988776431 1111 4578999999999876651
Q ss_pred ccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEE
Q 013385 78 FSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 157 (444)
Q Consensus 78 ~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV 157 (444)
.....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||
T Consensus 207 --------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dv 272 (521)
T 1v10_A 207 --------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSV 272 (521)
T ss_dssp --------------GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEE
T ss_pred --------------CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEE
Confidence 122346899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCcceEEEEEecCCCCC--CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCC--CCC--
Q 013385 158 LLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG--SPK-- 231 (444)
Q Consensus 158 ~v~~~~~~~g~y~i~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~-- 231 (444)
+|++++ ++|+|||++.....+.. .....++|+|.+..... +.. +.. ....... ..+..... .+.
T Consensus 273 lv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~-----~~~-~~~~~~~--~~l~p~~~~~~p~~~ 342 (521)
T 1v10_A 273 VVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE-PTT-----SQN-SGTALNE--ANLIPLINPGAPGNP 342 (521)
T ss_dssp EEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC-CCC-----CCC-CSCBCCG--GGCCBSSCCCCSSCS
T ss_pred EEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC-CCC-----CCC-cccccch--hhcccCCcccCCCcc
Confidence 999988 56899999987643321 12236999998643221 111 110 0011000 12222211 111
Q ss_pred CCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceE
Q 013385 232 PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 311 (444)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 311 (444)
.+...++++.+....+ .....|+|||++|..+..|.|.+...+.... . + ...++.+
T Consensus 343 ~~~~~~~~~~l~~~~~--~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~-------~----~-----------~~~~~~~ 398 (521)
T 1v10_A 343 VPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTNP-------N----D-----------LLPGGAV 398 (521)
T ss_dssp STTCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHTCCCG-------G----G-----------SSSTTTE
T ss_pred cCCcceEEEEEEEecC--CceeEEEECCCcccCCCCchhhhhhcCCccc-------c----c-----------CCCCceE
Confidence 1123455554433211 1223799999999988888876654321110 0 0 0112346
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEe-CCCcEEEEEEEc
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI-FPYGWTALRFVA 390 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v-~~~g~v~irf~a 390 (444)
+.++.|++|+|+|+| .+ .||||||||+||||+++.+. .+|+.+|.|||||.| +++||++|||+|
T Consensus 399 ~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~a 463 (521)
T 1v10_A 399 ISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVT 463 (521)
T ss_dssp EEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEEC
T ss_pred EEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEEEe
Confidence 899999999999999 45 89999999999999997653 257889999999999 899999999999
Q ss_pred CCceeeEEeccChhhHhcccEEEEecccccccC---CC-CCCcccCcccccccCC
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKRFMNP 441 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~~~~~ 441 (444)
||||.|+|||||+||++.|||++|.|+++++++ +| ...+.|+.|......+
T Consensus 464 DNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~~~~~ 518 (521)
T 1v10_A 464 DNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNANNPDS 518 (521)
T ss_dssp CSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTTCC---
T ss_pred CCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhccCCCc
Confidence 999999999999999999999999999987653 45 4579999998754433
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=4.6e-67 Score=539.03 Aligned_cols=361 Identities=27% Similarity=0.517 Sum_probs=266.7
Q ss_pred CccccceeeeEEEECCCCCCCC--CCCC-cceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEP--FHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAH 77 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p--~~~D-~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~ 77 (444)
.|+++||+|+|||+++++ +.+ |+.| +|++|+|+||+++...++. + .+.+|++||||++.++|..
T Consensus 114 ~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~------~---~~~~d~~liNG~~~~~~~~--- 180 (503)
T 1hfu_A 114 TQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ------G---AAQPDATLINGKGRYVGGP--- 180 (503)
T ss_dssp TGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC------------CCSEEEETTBCCBTTCC---
T ss_pred hhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc------C---CCCCCEEEECcccccCCCC---
Confidence 489999999999999864 223 3333 6899999999999876531 1 2468999999999886643
Q ss_pred ccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEE
Q 013385 78 FSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 157 (444)
Q Consensus 78 ~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV 157 (444)
....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||
T Consensus 181 ---------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dv 245 (503)
T 1hfu_A 181 ---------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSF 245 (503)
T ss_dssp ---------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEE
T ss_pred ---------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEE
Confidence 22346899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCcceEEEEEecCCCC------CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCC--C
Q 013385 158 LLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG--S 229 (444)
Q Consensus 158 ~v~~~~~~~g~y~i~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~--~ 229 (444)
+|++++ ++|+|||++.....+. ......++|+|.++.... +... ..+....+. . ..+..... .
T Consensus 246 lv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~~--~~~~~~~l~---~--~~l~p~~~~~~ 316 (503)
T 1hfu_A 246 VLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD-PTTS--ANPNPAQLN---E--ADLHALIDPAA 316 (503)
T ss_dssp EEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC-CCCC--CCSSCCBCC---G--GGCBBSSSCSC
T ss_pred EEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCC-CCCC--CCCccCCCc---c--ccccccCccCC
Confidence 999987 5689999998653321 112336999998643221 1111 111111110 0 12222211 1
Q ss_pred CC--CCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccc
Q 013385 230 PK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL 307 (444)
Q Consensus 230 ~~--~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 307 (444)
+. .+...+.++.+....+ +. .|+|||++|..+..|.|.+...+.... . + ...
T Consensus 317 p~~~~~~~~~~~~~l~~~~~---~~-~~~iNg~~~~~~~~P~l~~~~~g~~~~-------~----~-----------~~~ 370 (503)
T 1hfu_A 317 PGIPTPGAADVNLRFQLGFS---GG-RFTINGTAYESPSVPTLLQIMSGAQSA-------N----D-----------LLP 370 (503)
T ss_dssp SSCSSTTCSSEEEECCEEEE---TT-EEEETTBCCCCCSSCHHHHHHTTCCSG-------G----G-----------SSS
T ss_pred CCcccCCcceEEEEEEeecc---Cc-eEEECCCccCCCCCcchhhhhcCCccc-------c----c-----------CCC
Confidence 11 1123455554433211 22 799999999988888877654321110 0 0 012
Q ss_pred cceEEEccCCCEEEEEEEe-CCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEe-CCCcEEE
Q 013385 308 GSGVYMLGLNTTVDVILQN-ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI-FPYGWTA 385 (444)
Q Consensus 308 ~~~~~~~~~g~~v~~vl~N-~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v-~~~g~v~ 385 (444)
++.++.++.|++|||+|+| .+.+ .||||||||+||||+++.+. .+|+.+|.|||||.| +++||++
T Consensus 371 ~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~ 437 (503)
T 1hfu_A 371 AGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVT 437 (503)
T ss_dssp TTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEE
T ss_pred CceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEE
Confidence 2346899999999999995 4445 89999999999999997653 257789999999999 8999999
Q ss_pred EEEEcCCceeeEEeccChhhHhcccEEEEecccccccC---CC-CCCcccCccccc
Q 013385 386 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKR 437 (444)
Q Consensus 386 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~ 437 (444)
|||+|||||.|+|||||+||++.|||++|.++++++++ +| ...+.|+.|...
T Consensus 438 irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 438 IRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHTC
T ss_pred EEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhccchhhc
Confidence 99999999999999999999999999999999887653 45 457899988763
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=4.1e-61 Score=487.34 Aligned_cols=300 Identities=25% Similarity=0.302 Sum_probs=228.7
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++.+......+|+|++|+|+||+++... . .............++.++|||+..+
T Consensus 122 q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~-~~~~~~~~~~g~~~~~~~iNG~~~p----------- 188 (439)
T 2xu9_A 122 QLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-P-APHTPMDWMNGKEGDLVLVNGALRP----------- 188 (439)
T ss_dssp HHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-E-CCCCHHHHHHCCCCSEEEETTEESC-----------
T ss_pred HHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-c-CCCCccccccCCCCCEEEECCccCC-----------
Confidence 88999999999999864211234688999999999998631 0 0000000000235789999999765
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc-eeeEeeeEEecCCceEEEEEe
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLT 160 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~dV~v~ 160 (444)
.++|++| +|||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.++++.|+|||||||+|+
T Consensus 189 ----------------~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~ 251 (439)
T 2xu9_A 189 ----------------TLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVR 251 (439)
T ss_dssp ----------------EEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred ----------------cEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEE
Confidence 7999999 9999999999999999999999999999999998 899999999999999999999
Q ss_pred cCCCCCcceEEEEEecCCCC-----------------CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccccccccc
Q 013385 161 TNQDPSYNYWISAGVRGRKP-----------------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKI 223 (444)
Q Consensus 161 ~~~~~~g~y~i~~~~~~~~~-----------------~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 223 (444)
+++ +|+|||++.....+. ......++|+|.+... +.+.| . .+
T Consensus 252 ~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~p---~------------~l 310 (439)
T 2xu9_A 252 LRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK----PLPLP---K------------AL 310 (439)
T ss_dssp CCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC----CCCCC---S------------CC
T ss_pred cCC--CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc----cccCc---c------------cC
Confidence 987 688999997543321 1124678889874321 11111 0 00
Q ss_pred ccCCCCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCC
Q 013385 224 FALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNA 303 (444)
Q Consensus 224 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 303 (444)
....+... ...++++.+..... + ..|.|||++|..+..
T Consensus 311 ~~~~~l~~--~~~~r~~~l~~~~~---g-~~~~iNg~~~~~~~~------------------------------------ 348 (439)
T 2xu9_A 311 SPFPTLPA--PVVTRRLVLTEDMM---A-ARFFINGQVFDHRRV------------------------------------ 348 (439)
T ss_dssp CCCCCCCC--CSEEEEEEEEEEGG---G-TEEEETTBCCCTTCC------------------------------------
T ss_pred CCcccCCC--CCcceEEEEEeecc---C-ceEeECCEECCCCCC------------------------------------
Confidence 00001111 12246776665431 1 369999998853210
Q ss_pred CccccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcE
Q 013385 304 NTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGW 383 (444)
Q Consensus 304 ~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~ 383 (444)
.+.++.|++++|+|+|.+.+ .||||||||+||||+++.+.+ .+|.|||||.|++++|
T Consensus 349 -------~~~~~~g~~~~~~~~N~~~~------~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~ 405 (439)
T 2xu9_A 349 -------DLKGQAQTVEVWEVENQGDM------DHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGEV 405 (439)
T ss_dssp -------CEEECTTCEEEEEEEECSSS------CEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTCE
T ss_pred -------ceecCCCCEEEEEEEcCCCC------CCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCCE
Confidence 16789999999999998877 999999999999999975543 3789999999999999
Q ss_pred EEEEEEcCCceeeEEeccChhhHhcccEEEEecc
Q 013385 384 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 384 v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 417 (444)
++|||++||||.|+|||||++|++.|||++|.++
T Consensus 406 v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 406 ARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 9999999999999999999999999999999764
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=9.1e-59 Score=478.65 Aligned_cols=314 Identities=18% Similarity=0.198 Sum_probs=227.5
Q ss_pred ccccceeeeEEEECCCCCCCCCC--C-CcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFH--Y-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~--~-D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
|+.+||+|+|||+++++...+++ | +.|++|+|+||+++..++++... +......+|.+||||+..+
T Consensus 144 q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~~~---~~~~~~~gd~~lvNG~~~p-------- 212 (534)
T 3abg_A 144 NAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTN---GELNSFWGDVIHVNGQPWP-------- 212 (534)
T ss_dssp HHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCCCT---TCSSCCCCSEEEETTEESC--------
T ss_pred hhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceeccC---CCCccccCceeccCCccCc--------
Confidence 77899999999999876433332 3 67899999999998765543211 1111346899999999875
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcC-------cceEEEEeCCcc-ceeeEeeeEEec
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-------HKMVVVEADGNY-VQPFEVDDMDIY 150 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~-------h~~~via~DG~~-v~p~~v~~~~i~ 150 (444)
.+.|++ ++|||||||+|+.+.+.|+|++ |+|+|||+||++ ++|+.++.|.|+
T Consensus 213 -------------------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~ 272 (534)
T 3abg_A 213 -------------------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYIS 272 (534)
T ss_dssp -------------------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEEC
T ss_pred -------------------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEEC
Confidence 477887 5999999999999999999987 999999999985 589999999999
Q ss_pred CCceEEEEEecCCCCCcceEEEEEecC-CCC----CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccccccccccc
Q 013385 151 SGESYSVLLTTNQDPSYNYWISAGVRG-RKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 225 (444)
Q Consensus 151 ~GeR~dV~v~~~~~~~g~y~i~~~~~~-~~~----~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 225 (444)
+||||||+|++++.++.+|||++.... .|. ......++++|....... .......| ..+..
T Consensus 273 pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~--~~~~~~~P------------~~L~~ 338 (534)
T 3abg_A 273 MAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTT--QPDTSVVP------------ANLRD 338 (534)
T ss_dssp TTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSS--CSCCCCCC------------CCCCC
T ss_pred CccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCc--CCCCCCCc------------ccccc
Confidence 999999999999844447999875321 121 122346889987432210 00000011 01111
Q ss_pred CCCCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCc
Q 013385 226 LMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANT 305 (444)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 305 (444)
.. .+.++...++++.+... ...|+|||++|..+..|.
T Consensus 339 ~~-~p~~~~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~------------------------------------ 375 (534)
T 3abg_A 339 VP-FPSPTTNTPRQFRFGRT------GPTWTINGVAFADVQNRL------------------------------------ 375 (534)
T ss_dssp CS-CCCCCCCCCEEEECSCC------CSTTCCCCBTTBCTTSCC------------------------------------
T ss_pred CC-CCCCccccceEEEEecc------CceeEECCcccCCCCCcc------------------------------------
Confidence 11 11122234555543221 135999999985432221
Q ss_pred cccceEEEccCCCEEEEEEEeCC-cCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEE
Q 013385 306 TLGSGVYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT 384 (444)
Q Consensus 306 ~~~~~~~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v 384 (444)
...++.|++++|+|+|.+ .+ .||||||||+||||+++.|.+. ....++++ .|||||.|++++++
T Consensus 376 -----l~~v~~G~~~~w~i~N~~~~~------~HP~HLHG~~F~Vl~~~~g~~~---~~~~~~~~-~~rDTV~v~pg~~v 440 (534)
T 3abg_A 376 -----LANVPVGTVERWELINAGNGW------THPIHIHLVDFKVISRTSGNNA---RTVMPYES-GLKDVVWLGRRETV 440 (534)
T ss_dssp -----CCEECTTCEEEEEEEECSSSC------CCCEEESSCCEEEEEESSCCSS---SCCCSGGG-SCBSEECCCSSEEE
T ss_pred -----eeeccCCCEEEEEEEcCCCCC------CcCEEECCeeEEEEEEcCCCCc---CcCCcccc-CCcCeEEcCCCCEE
Confidence 146789999999999976 34 8999999999999999666432 11244556 89999999999999
Q ss_pred EEEEE-cCCceeeEEeccChhhHhcccEEEEeccc
Q 013385 385 ALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 385 ~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
+|||+ +||||.|+|||||++|++.|||++|.+..
T Consensus 441 ~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 475 (534)
T 3abg_A 441 VVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATV 475 (534)
T ss_dssp EEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECS
T ss_pred EEEEEECCCCccEEEecChHHHHhcCCceEEEEEe
Confidence 99998 99999999999999999999999997655
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=4.9e-59 Score=472.75 Aligned_cols=301 Identities=17% Similarity=0.141 Sum_probs=224.9
Q ss_pred ccccceeeeEEEECCCCCCC--CCCC-CcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 2 QRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~--p~~~-D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
|+++||+|+|||+++++... |..| |+|++|+|+||+++..+++..... .. ....++++||||+..+
T Consensus 125 q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~~--~~-~~~~~d~~liNG~~~p-------- 193 (451)
T 2uxt_A 125 QVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEP--GS-GGFVGDTLLVNGVQSP-------- 193 (451)
T ss_dssp HHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCCC--SS-SCCCCSEEEETTEESC--------
T ss_pred hHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceecccc--cC-CCCcCCEEEECCcccc--------
Confidence 88999999999999865322 4455 789999999999987765432111 11 1457899999999875
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEE-cCcceEEEEeCCccc-eeeEeeeEEecCCceEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYS 156 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~d 156 (444)
.+.|++| +|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+.++++.|++|||||
T Consensus 194 -------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~d 253 (451)
T 2uxt_A 194 -------------------YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERRE 253 (451)
T ss_dssp -------------------EEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEE
T ss_pred -------------------eEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEE
Confidence 6999999 9999999999999999999 899999999999998 89999999999999999
Q ss_pred EEEecCCCCCcceEEEEEecCCCC----------CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccC
Q 013385 157 VLLTTNQDPSYNYWISAGVRGRKP----------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 226 (444)
Q Consensus 157 V~v~~~~~~~g~y~i~~~~~~~~~----------~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 226 (444)
|+|++++ +++|||++.....+. ......++++|........+.. ..|. .+...
T Consensus 254 vlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~---~~p~------------~L~~~ 316 (451)
T 2uxt_A 254 ILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD---SLPM------------RLLPT 316 (451)
T ss_dssp EEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-------CCCS------------CSSSS
T ss_pred EEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc---cCcc------------ccCCC
Confidence 9999986 588999987643221 1123467888874322111111 1110 11111
Q ss_pred CCCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCcc
Q 013385 227 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT 306 (444)
Q Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 306 (444)
.. ...+...++++.+. + .|+|||++|..+. +
T Consensus 317 ~~-~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~--------------------~------------------- 347 (451)
T 2uxt_A 317 EI-MAGSPIRSRDISLG-------D--DPGINGQLWDVNR--------------------I------------------- 347 (451)
T ss_dssp CC-CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC--------------------C-------------------
T ss_pred CC-CCCCCcceEEEEEe-------e--EEEECCEeCCCCC--------------------C-------------------
Confidence 11 11122233444332 1 5999999885321 0
Q ss_pred ccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEE
Q 013385 307 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTAL 386 (444)
Q Consensus 307 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~i 386 (444)
.+.++.|++|+|+|+|. + .||||||||+||||+++... +++.+|.|||||.| +++++|
T Consensus 348 ----~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i 405 (451)
T 2uxt_A 348 ----DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVEL 405 (451)
T ss_dssp ----CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEE
T ss_pred ----cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEE
Confidence 17789999999999997 4 89999999999999985322 34567999999999 899999
Q ss_pred EEEcCCcee----eEEeccChhhHhcccEEEEecccccc
Q 013385 387 RFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETV 421 (444)
Q Consensus 387 rf~adnpG~----w~~HCHi~~H~~~GM~~~~~~~~~~~ 421 (444)
+|++||||. |+|||||++|++.|||++|.+...++
T Consensus 406 ~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 406 LVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp EEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred EEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 999999988 99999999999999999998877554
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.8e-58 Score=466.47 Aligned_cols=303 Identities=19% Similarity=0.276 Sum_probs=225.7
Q ss_pred CccccceeeeEEEECCCCCCCCCCCC-cceEEEEeecCCCCHHHHHhhhcC-CCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSS-RPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~~~D-~e~~l~l~Dw~~~~~~~~~~~~~~-~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
.|+++||+|+|||+++++. .++.|| +|++|+|+||+++. +++.. +.. .......+++.+||||+..+
T Consensus 112 ~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~-~~~~~~~~~~~~~~~~liNG~~~p-------- 180 (448)
T 3aw5_A 112 KQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY-NPTPMEMIAGFLGNAVLVNGVKDA-------- 180 (448)
T ss_dssp HHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-CCCHHHHHHCCCCSEEEETTEETC--------
T ss_pred HHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-cccccccccCccccEEEECCcccc--------
Confidence 3889999999999998763 344677 89999999999987 55422 100 00001347899999999875
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEE--cC---cceEEEEeCCccce-eeEeeeEEecCC
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV--KN---HKMVVVEADGNYVQ-PFEVDDMDIYSG 152 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i--~~---h~~~via~DG~~v~-p~~v~~~~i~~G 152 (444)
.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||++++ |+.++.+.|++|
T Consensus 181 -------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pg 240 (448)
T 3aw5_A 181 -------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPA 240 (448)
T ss_dssp -------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTT
T ss_pred -------------------eEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCc
Confidence 7999999 9999999999999999999 99 99999999999998 999999999999
Q ss_pred ceEEEEEecCCCCCcceEEEEEecCCCC-------------CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccccc
Q 013385 153 ESYSVLLTTNQDPSYNYWISAGVRGRKP-------------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSF 219 (444)
Q Consensus 153 eR~dV~v~~~~~~~g~y~i~~~~~~~~~-------------~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 219 (444)
|||||+|++++ +.|||++.....+. ......++++|.+.... +. |. .
T Consensus 241 eR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---p~-----~------- 300 (448)
T 3aw5_A 241 ERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA--VP---VE-----A------- 300 (448)
T ss_dssp CEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC--CC---CC-----C-------
T ss_pred ceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC--CC---cc-----c-------
Confidence 99999999984 68999987654321 11235677888643211 00 10 0
Q ss_pred ccccccCCCCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCC
Q 013385 220 SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKP 299 (444)
Q Consensus 220 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 299 (444)
+... +....+...++++.+.... ..|+|||++|..+. |
T Consensus 301 ---L~~l-p~~~~~~~~~~~~~l~~~~------~~~~iNg~~~~~~~--------------------p------------ 338 (448)
T 3aw5_A 301 ---LSDP-PPEPPKPTRTRRFALSLSG------MQWTINGMFWNASN--------------------P------------ 338 (448)
T ss_dssp ---CSCC-CCCCCCCSEEEEEEEEEET------TEEEETTBCCCTTC--------------------T------------
T ss_pred ---cCCC-CCCCCCCCceEEEEEeCCC------ceeeECCCcCCCCC--------------------C------------
Confidence 0000 0011123346666665421 25999999985311 0
Q ss_pred CCCCCccccceEEE-ccCCCEEEEEEEeCC-cCCCCCCCCCceeecccceEEEeecCCCCCch-hhccc----CCCCCCc
Q 013385 300 PVNANTTLGSGVYM-LGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKF----NLKNPPL 372 (444)
Q Consensus 300 ~~~~~~~~~~~~~~-~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-~~~~~----n~~~p~~ 372 (444)
.+. ++.|++|+|+|+|.+ .+ .||||||||+||||+++ |.+... +...+ +..++.|
T Consensus 339 -----------~~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~ 400 (448)
T 3aw5_A 339 -----------LFEHVSVEGVELWEIVNDKASM------PHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGL 400 (448)
T ss_dssp -----------TCCCEEECEEEEEEEEECSSSC------CEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSC
T ss_pred -----------ceeccCCCCeEEEEEEcCCCCC------CcCEEECCceEEEEEec-CCCcccccccccccCCCccccCC
Confidence 134 789999999999987 66 89999999999999984 555321 22222 2334579
Q ss_pred cceEEeCCCcEEEEE--EE---cCCceeeEEeccChhhHhcccEEEEec
Q 013385 373 KNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 373 rDTv~v~~~g~v~ir--f~---adnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
||||.|+++++++|+ |+ +||| |+|||||++|++.|||++|.+
T Consensus 401 rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 401 KDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp BSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred ccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 999999999998655 99 9999 999999999999999999975
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.2e-57 Score=468.07 Aligned_cols=320 Identities=18% Similarity=0.208 Sum_probs=227.2
Q ss_pred ccccceeeeEEEECCCCCCCCC-CCCcceEEEEeecCCCCHHHHHhhhcC----C-----CCCcCCCCCceEEcCCCCCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS----R-----PLRWIGEPQTLLINGRGQFN 71 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~-~~D~e~~l~l~Dw~~~~~~~~~~~~~~----~-----~~~~~~~~d~~liNG~~~~~ 71 (444)
|+++||+|+|||+++++...++ .+|+|++|+|+||+++..+++...... . .......++++||||+..+
T Consensus 163 q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p- 241 (513)
T 2wsd_A 163 NVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP- 241 (513)
T ss_dssp HHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-
T ss_pred hhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc-
Confidence 7899999999999986532222 358999999999999876654322110 0 0001346899999999875
Q ss_pred CcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCc-ceEEEEeCCccc-eeeEeeeEEe
Q 013385 72 CSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADGNYV-QPFEVDDMDI 149 (444)
Q Consensus 72 c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h-~~~via~DG~~v-~p~~v~~~~i 149 (444)
.+.|++ ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++.|.|
T Consensus 242 --------------------------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l 294 (513)
T 2wsd_A 242 --------------------------YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSL 294 (513)
T ss_dssp --------------------------EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEE
T ss_pred --------------------------eEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEE
Confidence 688888 58999999999999999999999 999999999998 8999999999
Q ss_pred cCCceEEEEEecCCCCCcceEEEEEecCCCC---CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccC
Q 013385 150 YSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 226 (444)
Q Consensus 150 ~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 226 (444)
++||||||+|++++. +|+ +++......|. ......++|+|........+. ....|. .+...
T Consensus 295 ~pgeR~dvlv~~~~~-~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~--~~~~p~------------~l~~~ 358 (513)
T 2wsd_A 295 APAERYDIIIDFTAY-EGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKD--ESRKPK------------YLASY 358 (513)
T ss_dssp CTTCEEEEEEECGGG-TTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCC--CCCCCS------------BCSCC
T ss_pred CCeeeEEEEEECCCC-CCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCc--cCCCCc------------cccCC
Confidence 999999999999873 455 34433332231 112345788887432111000 001111 00000
Q ss_pred CCCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCcc
Q 013385 227 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT 306 (444)
Q Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 306 (444)
...+......++++.+...... .+...|.|||++|..+.
T Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~iNg~~~~~~~---------------------------------------- 397 (513)
T 2wsd_A 359 PSVQHERIQNIRTLKLAGTQDE-YGRPVLLLNNKRWHDPV---------------------------------------- 397 (513)
T ss_dssp GGGCCCCEEEEEEEEEEEEECT-TSCEEEEETTBCTTSCC----------------------------------------
T ss_pred CCcccCCCcceEEEEEEeecCC-CCCceEeECCccCCCcc----------------------------------------
Confidence 0001111234566666543322 24457899999874210
Q ss_pred ccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCC---CCCchhhcccCCCC---------CCccc
Q 013385 307 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTKEDEKKFNLKN---------PPLKN 374 (444)
Q Consensus 307 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~~~~n~~~---------p~~rD 374 (444)
.+.++.|++++|+|+|.+.+ .||||||||+||||+++.+ .|+. ...+|+.+ +.|||
T Consensus 398 ----~~~~~~g~~~~w~l~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~rD 465 (513)
T 2wsd_A 398 ----TETPKVGTTEIWSIINPTRG------THPIHLHLVSFRVLDRRPFDIARYQE--SGELSYTGPAVPPPPSEKGWKD 465 (513)
T ss_dssp ----CBCCBTTCEEEEEEEECSSS------CEEEEESSCCEEEEEEEEBCHHHHHH--HCCCCBSSCCBCCCGGGSSCBS
T ss_pred ----cEecCCCCEEEEEEEcCCCC------CcCEeEeCceEEEEEecCcccccccc--cccccccCCCCCCCccccCccc
Confidence 14678999999999998876 9999999999999998752 1211 11233333 45999
Q ss_pred eEEeCCCcEEEEEEEc-CCceeeEEeccChhhHhcccEEEEeccc
Q 013385 375 TAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 375 Tv~v~~~g~v~irf~a-dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
||.|++++++.|+|++ ||||.|+|||||++|++.|||++|.+.+
T Consensus 466 Tv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 466 TIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred EEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 9999999999999888 8999999999999999999999998765
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=8e-56 Score=468.49 Aligned_cols=339 Identities=17% Similarity=0.178 Sum_probs=212.3
Q ss_pred CccccceeeeEEEECCCCCCCCC-CCCcceEEEEeecCCCCHHHHHhhhc---------C-C-----CCCcCCCCCceEE
Q 013385 1 MQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLS---------S-R-----PLRWIGEPQTLLI 64 (444)
Q Consensus 1 ~Q~~dGL~G~lIV~~~~~~~~p~-~~D~e~~l~l~Dw~~~~~~~~~~~~~---------~-~-----~~~~~~~~d~~li 64 (444)
+|+.+||+|+|||+++++...++ .+|+|++|+|+||+++...+...... . . .......++.++|
T Consensus 180 ~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~v 259 (612)
T 3gyr_A 180 WNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTV 259 (612)
T ss_dssp HHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEE
T ss_pred hhhhccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeee
Confidence 38999999999999987644443 34899999999999876544322110 0 0 0001345688999
Q ss_pred cCCCCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcc-------eEEEEeCCc
Q 013385 65 NGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK-------MVVVEADGN 137 (444)
Q Consensus 65 NG~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~-------~~via~DG~ 137 (444)
||+..+ .+.+++ ++|||||||+|+.+.|.|+|++|. |+|||+||+
T Consensus 260 NG~~~p---------------------------~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~ 311 (612)
T 3gyr_A 260 NGRIWP---------------------------YADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGG 311 (612)
T ss_dssp TTEESC---------------------------EEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTE
T ss_pred cCCccc---------------------------eEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCC
Confidence 998765 567764 689999999999999999999984 999999999
Q ss_pred cc-eeeEee------eEEecCCceEEEEEecCCCCCcce-EEEEEecCCCC------CCCCeEEEEEEcCCCCCCCCCCC
Q 013385 138 YV-QPFEVD------DMDIYSGESYSVLLTTNQDPSYNY-WISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSP 203 (444)
Q Consensus 138 ~v-~p~~v~------~~~i~~GeR~dV~v~~~~~~~g~y-~i~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~~~ 203 (444)
++ +|+.++ .|.|++||||||||++++. .+.+ +++......+. .......+++|............
T Consensus 312 ~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
T 3gyr_A 312 LLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRAL-GGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFA 390 (612)
T ss_dssp EEEEEEEECSSSSSSSEEECTTCEEEEEEECTTC-TTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCC
T ss_pred ccccceeccCcccccEEEeccceEEEEEEECCCC-CceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccc
Confidence 98 576654 7999999999999999984 4443 34333222221 12233456666532222111111
Q ss_pred CCCCCCCCC--CccccccccccccCCC-CCCCCCccceEEEEEeccc----------------ccCCeEEEEecCccccC
Q 013385 204 PPITPRWDD--YDHSKSFSNKIFALMG-SPKPPTNFHRRLTLLNTQN----------------TINGFTKWAINNVSLTL 264 (444)
Q Consensus 204 ~p~~p~~~~--~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~----------------~~~~~~~~~iNg~~~~~ 264 (444)
.|....... ................ .............+..... .......|.+|+..|.
T Consensus 391 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~- 469 (612)
T 3gyr_A 391 LPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN- 469 (612)
T ss_dssp CCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-
Confidence 111100000 0000000000000000 0000000000000000000 0000112222222211
Q ss_pred CCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecc
Q 013385 265 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 344 (444)
Q Consensus 265 p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG 344 (444)
....+.++.|++|+|+|+|.+.+ .|||||||
T Consensus 470 -------------------------------------------~~~~~~~~~g~~~~w~i~N~~~~------~HP~HLHG 500 (612)
T 3gyr_A 470 -------------------------------------------DGLGFTIGEGTHEQWTFLNLSPI------LHPMHIHL 500 (612)
T ss_dssp -------------------------------------------SCCCEEEETTCEEEEEEEECSSS------CEEEEESS
T ss_pred -------------------------------------------CCcceEeCCCCEEEEEEEcCCCC------CcCEeECC
Confidence 11237889999999999999887 99999999
Q ss_pred cceEEEeecCCCCCch----------------hhcccCCCCCCccceEEeCCCcEEEEEEE-cCCceeeEEeccChhhHh
Q 013385 345 HDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFH 407 (444)
Q Consensus 345 ~~F~Vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~v~~~g~v~irf~-adnpG~w~~HCHi~~H~~ 407 (444)
|+||||+++.+.+... .....+..++.|||||.|++++|++|||+ +||||.|+|||||++|++
T Consensus 501 ~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed 580 (612)
T 3gyr_A 501 ADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHED 580 (612)
T ss_dssp CEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHH
T ss_pred CcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHh
Confidence 9999999865433221 11235667889999999999999999998 899999999999999999
Q ss_pred cccEEEEeccc
Q 013385 408 IGMGVVLALGV 418 (444)
Q Consensus 408 ~GM~~~~~~~~ 418 (444)
.|||++|.+.+
T Consensus 581 ~GMM~~f~V~~ 591 (612)
T 3gyr_A 581 MGMMRPFVVMP 591 (612)
T ss_dssp TTCEEEEEEEC
T ss_pred CcCCcceEEeC
Confidence 99999997654
No 15
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=6.8e-55 Score=453.15 Aligned_cols=349 Identities=16% Similarity=0.178 Sum_probs=228.7
Q ss_pred ccccceeeeEEEECCCCCCCCC-CCCcceEEEEeecCCCCHHH------HHhh--hcC---CC-CC---cCCCCCceEEc
Q 013385 2 QRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHE------QEVG--LSS---RP-LR---WIGEPQTLLIN 65 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~-~~D~e~~l~l~Dw~~~~~~~------~~~~--~~~---~~-~~---~~~~~d~~liN 65 (444)
|+.+||+|+|||+++++...++ .+|+|++|+|+||+++...+ +... +.. .. .. ....+|.+|||
T Consensus 181 q~~~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVN 260 (612)
T 2g23_A 181 NVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVN 260 (612)
T ss_dssp HTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEET
T ss_pred hhhccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEEC
Confidence 8899999999999986533222 36999999999999975421 1000 000 01 00 12467999999
Q ss_pred CCCCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCc-------ceEEEEeCCcc
Q 013385 66 GRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-------KMVVVEADGNY 138 (444)
Q Consensus 66 G~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h-------~~~via~DG~~ 138 (444)
|+..+ .+.|++| +|||||||+|+.+.|.|+|++| +|+|||+||++
T Consensus 261 G~~~p---------------------------~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~ 312 (612)
T 2g23_A 261 GRIWP---------------------------YADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGL 312 (612)
T ss_dssp TEESC---------------------------EEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEE
T ss_pred CccCC---------------------------eEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeE
Confidence 99875 6899999 9999999999999999999999 89999999999
Q ss_pred c-eeeEee------eEEecCCceEEEEEecCCCCCcceEEEEEecCCCCC------CCCeEEEEEEcCCCCCCCCCCCCC
Q 013385 139 V-QPFEVD------DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA------TPPALTLLNYHPTSASKIPLSPPP 205 (444)
Q Consensus 139 v-~p~~v~------~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~~------~~~~~ail~y~~~~~~~~~~~~~p 205 (444)
+ +|+.++ +|.|++||||||||++++.++.+|+|+.......+. ......++++.........+...|
T Consensus 313 l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P 392 (612)
T 2g23_A 313 LPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALP 392 (612)
T ss_dssp EEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCC
T ss_pred ccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCC
Confidence 9 599999 999999999999999998655679998764221110 011123555442211111111111
Q ss_pred C-C-CCCCCCccccccccccccCCC-CCCCCCccceEEEEEecc---------------cccCC-eEEEEecCccccCCC
Q 013385 206 I-T-PRWDDYDHSKSFSNKIFALMG-SPKPPTNFHRRLTLLNTQ---------------NTING-FTKWAINNVSLTLPP 266 (444)
Q Consensus 206 ~-~-p~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~---------------~~~~~-~~~~~iNg~~~~~p~ 266 (444)
. + +....+............+.+ .........+...+.... ....+ ...|.|||+.|...
T Consensus 393 ~~L~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~- 471 (612)
T 2g23_A 393 EVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG- 471 (612)
T ss_dssp SSCCSSCCCCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC-
T ss_pred hhhccccccCCcccccceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC-
Confidence 1 0 000000000000000000000 000000000111111000 00012 23577777766310
Q ss_pred CCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccc
Q 013385 267 TPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 346 (444)
Q Consensus 267 ~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~ 346 (444)
..+.++.|++|+|+|.|.+.+ .|||||||+.
T Consensus 472 -------------------------------------------~~~~v~~G~~v~w~l~N~~~~------~HPiHlHg~~ 502 (612)
T 2g23_A 472 -------------------------------------------LGFTIGEGTHEQWTFLNLSPI------LHPMHIHLAD 502 (612)
T ss_dssp -------------------------------------------CCEEEETTCEEEEEEEECSSS------CEEEEESSCC
T ss_pred -------------------------------------------CceEecCCCEEEEEEEeCCCC------CCCeEEcCce
Confidence 027899999999999999877 9999999999
Q ss_pred eEEEeecCCCCC---ch-------------hhcccCCCCCCccceEEeCCCcEEEEEEEcC-CceeeEEeccChhhHhcc
Q 013385 347 FWVLGRGEGKFT---KE-------------DEKKFNLKNPPLKNTAVIFPYGWTALRFVAD-NPGAWAFHCHIEPHFHIG 409 (444)
Q Consensus 347 F~Vl~~g~g~~~---~~-------------~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad-npG~w~~HCHi~~H~~~G 409 (444)
|+|++++.+.++ .. .....+..++.|||||.|+|+++++|+|+++ |||.|+|||||++|++.|
T Consensus 503 F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~G 582 (612)
T 2g23_A 503 FQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMG 582 (612)
T ss_dssp EEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTT
T ss_pred EEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcC
Confidence 999998543221 10 0122455667899999999999999999999 999999999999999999
Q ss_pred cEEEEecccccccCCCCCC
Q 013385 410 MGVVLALGVETVGNIPNQA 428 (444)
Q Consensus 410 M~~~~~~~~~~~~~~P~~~ 428 (444)
||+.|.+.+++++++|...
T Consensus 583 Mm~~f~V~p~~~~~~~~~~ 601 (612)
T 2g23_A 583 MMRPFVVMPPEALKFDHGG 601 (612)
T ss_dssp CEEEEEEECHHHHTTC---
T ss_pred CceEEEECchhhccCCCCC
Confidence 9999999998888877644
No 16
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9e-54 Score=434.40 Aligned_cols=303 Identities=22% Similarity=0.299 Sum_probs=217.8
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhh-hcCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG-LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~-~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
|+.+||+|+|||+++++ .+++++.++ |+|+||+++..+++... .... .....++.+||||+..+
T Consensus 158 q~~~GL~G~lIV~~~~~--~~~~~~~~~-l~l~D~~~~~~g~~~~~~~~~~--~~g~~gd~~lvNG~~~p---------- 222 (481)
T 3zx1_A 158 QVFMGLAGAFVIKAKKD--ALSHLKEKD-LMISDLRLDENAQIPNNNLNDW--LNGREGEFVLINGQFKP---------- 222 (481)
T ss_dssp HHHTTCCEEEEEECSSC--TTTTSEEEE-EEEEEECCBTTSCCCCCCHHHH--HHCCCCSEEEETTEESC----------
T ss_pred hhhccceEEEEEcCccc--cccCCCcee-EEEEEEeccCCCccccccchhh--ccCCcCCEEEECCccCc----------
Confidence 88999999999999865 345566666 99999999876543200 0000 00236789999999865
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc-eeeEeeeEEecCCceEEEEE
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~dV~v 159 (444)
.+.|++|+ ||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.++.|.|++||||||+|
T Consensus 223 -----------------~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv 283 (481)
T 3zx1_A 223 -----------------KIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLI 283 (481)
T ss_dssp -----------------EEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEE
T ss_pred -----------------eEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEE
Confidence 79999998 99999999999999999999999999998776 89999999999999999999
Q ss_pred ecCCCCCcceEEEEEecCCCC----CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCc
Q 013385 160 TTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN 235 (444)
Q Consensus 160 ~~~~~~~g~y~i~~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 235 (444)
++++ +++|.+.+....... .......++++..... ....| . .+..... . +...
T Consensus 284 ~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~lP---~------------~l~~~~~-~-~~~~ 340 (481)
T 3zx1_A 284 DAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE----NVELP---K------------NLKIFKP-S-EEPK 340 (481)
T ss_dssp ECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC----CCCCC---S------------CSCCCCC-C-CCCC
T ss_pred EcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCC----CccCC---c------------cccCCCC-C-CCCC
Confidence 9986 577888775433211 1122344444432110 01111 1 0111111 1 1112
Q ss_pred cceEEEEEecccccC-----Ce--------EEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCC
Q 013385 236 FHRRLTLLNTQNTIN-----GF--------TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVN 302 (444)
Q Consensus 236 ~~~~~~~~~~~~~~~-----~~--------~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 302 (444)
.++++.+........ +. ..|.|||..|.. +.+
T Consensus 341 ~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-------------------~~~---------------- 385 (481)
T 3zx1_A 341 EFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-------------------KRI---------------- 385 (481)
T ss_dssp EEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-------------------TCC----------------
T ss_pred cEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-------------------CCc----------------
Confidence 455555543211000 00 139999988731 010
Q ss_pred CCccccceEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeec-CCCCCchhhcccCCCCCCccceEEeCCC
Q 013385 303 ANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG-EGKFTKEDEKKFNLKNPPLKNTAVIFPY 381 (444)
Q Consensus 303 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g-~g~~~~~~~~~~n~~~p~~rDTv~v~~~ 381 (444)
.+.++.|++|+|+|.|.+.+ .|||||||+.|+|+++. .|.. ....++.|||||.|+|+
T Consensus 386 --------~~~~~~G~~v~w~l~N~~~~------~Hp~HlHG~~F~vl~~~~~g~~-------~~~~~~~~kDTv~v~Pg 444 (481)
T 3zx1_A 386 --------DLSSKLGVVEDWIVINKSHM------DHPFHIHGTQFELISSKLNGKV-------QKAEFRALRDTINVRPN 444 (481)
T ss_dssp --------CEEEETTCCEEEEEEECSSS------CEEEEETTCCEEEEEEEETTEE-------EECSSCCEESEEEECTT
T ss_pred --------eEEeCCCCEEEEEEEcCCCC------ceeEEEeccEEEEEEecccCCC-------CCcccCcccceEEECCC
Confidence 17889999999999998877 99999999999999983 2211 11235789999999999
Q ss_pred cEEEEEEEcCCceeeEEeccChhhHhcccEEEEecc
Q 013385 382 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 382 g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 417 (444)
++++|+|++||||.|+||||+++|++.|||.+|.+.
T Consensus 445 ~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 445 EELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999999999999999999764
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=5e-53 Score=428.72 Aligned_cols=310 Identities=19% Similarity=0.253 Sum_probs=212.9
Q ss_pred ccccceeeeEEEECCCCCC--CCCCC-CcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 2 QRSAGLYGSLIVDVADGEK--EPFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~--~p~~~-D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
|+.+||+|+|||+++++.. .|..| +.|++|+|+||+++..+++..............+|.+||||+..+
T Consensus 123 q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p-------- 194 (488)
T 3od3_A 123 QVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP-------- 194 (488)
T ss_dssp HHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSSC--------
T ss_pred hhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcCc--------
Confidence 7889999999999986532 23345 368999999999987654321110000000336799999999875
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEE-cCcceEEEEeCCccc-eeeEeeeEEecCCceEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYS 156 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~d 156 (444)
.+.+ +|++|||||||+|+.+.|.|+| +||+|+|||+||+++ +|+.+++|.|++|||||
T Consensus 195 -------------------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~d 254 (488)
T 3od3_A 195 -------------------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFE 254 (488)
T ss_dssp -------------------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEE
T ss_pred -------------------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEE
Confidence 3444 6789999999999999999999 699999999999987 89999999999999999
Q ss_pred EEEecCCCCCcceEEEEEecCCCC----CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCC
Q 013385 157 VLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP 232 (444)
Q Consensus 157 V~v~~~~~~~g~y~i~~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (444)
|+|++++ ++.|++++....... .......+++...... ......|. .+......+..
T Consensus 255 vlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~P~---------------~L~~~~~~~~~ 315 (488)
T 3od3_A 255 VLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAI--SASGALPD---------------TLSSLPALPSL 315 (488)
T ss_dssp EEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEE--ECCCCCCS---------------CCCCCCCCCCC
T ss_pred EEEEeCC--CceEEEEEeccCCCCcccccccCccceeEeccccc--CCCCCCCc---------------ccccCCCCccc
Confidence 9999986 578999876433221 1111223333321100 00011110 00000000111
Q ss_pred CCccceEEEEEeccc-----------------cc------------CCe-------------EEEEecCccccCCCCCcc
Q 013385 233 PTNFHRRLTLLNTQN-----------------TI------------NGF-------------TKWAINNVSLTLPPTPYL 270 (444)
Q Consensus 233 p~~~~~~~~~~~~~~-----------------~~------------~~~-------------~~~~iNg~~~~~p~~p~l 270 (444)
....++++.+.+... .. .+. ..|.|||++|...
T Consensus 316 ~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~----- 390 (488)
T 3od3_A 316 EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN----- 390 (488)
T ss_dssp TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT-----
T ss_pred ccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC-----
Confidence 112355655543100 00 010 1379999887421
Q ss_pred ccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCC-cCCCCCCCCCceeecccceEE
Q 013385 271 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWV 349 (444)
Q Consensus 271 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~F~V 349 (444)
. | .+.++.|++|+|.|.|.+ .+ .|||||||++|+|
T Consensus 391 --------------~-~-----------------------~~~~~~G~~e~w~l~N~~~~~------~Hp~HlHg~~F~V 426 (488)
T 3od3_A 391 --------------K-P-----------------------MFAAAKGQYERWVISGVGDMM------LHPFHIHGTQFRI 426 (488)
T ss_dssp --------------C-C-----------------------SEECCBSSCEEEEEECTTCCC------CEEEEETTCCBEE
T ss_pred --------------C-C-----------------------ceEcCCCCEEEEEEEeCCCCC------CccEEEcCceEEE
Confidence 0 0 178999999999999987 55 8999999999999
Q ss_pred EeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC----CceeeEEeccChhhHhcccEEEEec
Q 013385 350 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD----NPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 350 l~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad----npG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
++++..... ..++.|||||.|+ |+++.|+|+++ +||.|+||||+++|++.|||.+|.+
T Consensus 427 l~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 427 LSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 998543222 1245799999999 99999999974 5789999999999999999999864
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.6e-32 Score=279.12 Aligned_cols=236 Identities=15% Similarity=0.077 Sum_probs=152.0
Q ss_pred eEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
+++++++|++|||||+|++.. ..+.++++| + ++.||.+ +.+.|+|||||++++++++ +|+||++...
T Consensus 195 p~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~ 262 (447)
T 2dv6_A 195 PFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TGPGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCAT 262 (447)
T ss_dssp CCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CSGGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred CeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cCCCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCC
Confidence 379999999999999999862 345555555 3 3689974 2345999999999999987 5999998864
Q ss_pred cCCCCC-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeEE
Q 013385 176 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 254 (444)
Q Consensus 176 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 254 (444)
.....+ .....+.|.+.+... . |.... ... ..+..... .... .......+............
T Consensus 263 ~~~~~~~~~Gl~g~l~v~~~~~-------~---P~~d~-~~~----~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~ 325 (447)
T 2dv6_A 263 PSVPTHITNGMYGLLLVEPEGG-------L---PQVDR-EFY----VMQGEIYT-VKSF-GTSGEQEMDYEKLINEKPEY 325 (447)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC-------S---CCCSE-EEE----EEEEEECB-SSCT-TCCEECCBBHHHHHTTCCSE
T ss_pred CChHHHHhCCCEEEEEEeCCCC-------C---CCCCe-eEE----EEeccccc-CCcc-cccccccCChHHhhccCCCE
Confidence 210001 123456677763210 1 11110 000 00000000 0000 00000000000000011346
Q ss_pred EEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCC
Q 013385 255 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 334 (444)
Q Consensus 255 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 334 (444)
|.|||.++.... ...+.++.|++++|+|.|.+..
T Consensus 326 ~~iNG~~~~~~~------------------------------------------~~~~~v~~g~~vrlrliN~~~~---- 359 (447)
T 2dv6_A 326 FLFNGSVGSLTR------------------------------------------SHPLYASVGETVRIFFGVGGPN---- 359 (447)
T ss_dssp EEETTSTTCCCC------------------------------------------CCCEEECTTCEEEEEEEEEESS----
T ss_pred EEECCcccCCCC------------------------------------------CcceEECCCCEEEEEEEeCCCC----
Confidence 889998763100 0138899999999999997632
Q ss_pred CCCCceeecccceEEEeecCCCCCchhhcccCCCCCC-ccceEEeCCCcEEEEEEEcCCceeeEEeccChhhHhcccEEE
Q 013385 335 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 413 (444)
Q Consensus 335 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~ 413 (444)
..||||||||+|+||+.+. .+. .+|. +|||+.|++|+++.|+|+++|||.|+||||+++|++.||+++
T Consensus 360 -~~h~~hlhGh~f~vv~~dG-~~~---------~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~ 428 (447)
T 2dv6_A 360 -FTSSFHVIGEIFDHVYSLG-SVV---------SPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGF 428 (447)
T ss_dssp -CCEEEEEETCCEEEECGGG-CSS---------SCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEE
T ss_pred -ceEeEEEcCcEEEEEEcCC-ccc---------CCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEE
Confidence 1899999999999999853 321 2344 799999999999999999999999999999999999999999
Q ss_pred Eeccc
Q 013385 414 LALGV 418 (444)
Q Consensus 414 ~~~~~ 418 (444)
|.+..
T Consensus 429 ~~v~~ 433 (447)
T 2dv6_A 429 LNVDG 433 (447)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 96543
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.97 E-value=2.5e-31 Score=294.28 Aligned_cols=326 Identities=15% Similarity=0.195 Sum_probs=185.2
Q ss_pred ccccceeeeEEEECCCCCCCC-CCCCcceEEEE----eecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCC-CC---
Q 013385 2 QRSAGLYGSLIVDVADGEKEP-FHYDGEFNLLL----SDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQF-NC--- 72 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p-~~~D~e~~l~l----~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~-~c--- 72 (444)
|+.+||+|+|||++......| ++||.|++++| +||++..+.++...+...... .+.++++|+.... ..
T Consensus 704 ~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~~n~~~~~iG~tY~ 780 (1065)
T 2j5w_A 704 HYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAFLDKGEFYIGSKYK 780 (1065)
T ss_dssp HHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTTTCCTTTCCCSEEE
T ss_pred ccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---CccceeecCCCccccceEe
Confidence 788999999999988553334 78899999999 999999877655433221111 2566666764221 00
Q ss_pred -cccccccCCCccc--cccC--CCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeE
Q 013385 73 -SLAAHFSNGSAEQ--CKLR--GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDM 147 (444)
Q Consensus 73 -~~~~~~~~~~~~~--c~~~--~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~ 147 (444)
...-.|+....+. .... ..-+...++|++++|+++|+||+|... ..+.|+ .|.+++.+.++ .
T Consensus 781 k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih--~HGl~~~~~~~----------~ 847 (1065)
T 2j5w_A 781 KVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIH--AHGVQTESSTV----------T 847 (1065)
T ss_dssp EEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCE--ESSCBCSCSCC----------C
T ss_pred eeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEe--eccccccCCCC----------c
Confidence 0000011110000 0000 000223378999999999999999964 334444 44455543321 2
Q ss_pred EecCCceEEEEEecCCCC--------CcceEEEEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccc-c
Q 013385 148 DIYSGESYSVLLTTNQDP--------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK-S 218 (444)
Q Consensus 148 ~i~~GeR~dV~v~~~~~~--------~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~-~ 218 (444)
.|.|||+++..+.+.+.. .|+||.+..............+.|........ ... ..+.-.+..... .
T Consensus 848 ~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l--~~~---~~~~d~D~~l~~~~ 922 (1065)
T 2j5w_A 848 PTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL--KVF---NPRRKLEFALLFLV 922 (1065)
T ss_dssp CBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC----------CCCCEEEEEEEEEE
T ss_pred eeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccc--ccc---CCCcceEEEEEEEe
Confidence 567999988888876521 25899875532100001112333333321100 000 000000000000 0
Q ss_pred cccccccCC-----CCCCCCCccceEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCC
Q 013385 219 FSNKIFALM-----GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 293 (444)
Q Consensus 219 ~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~ 293 (444)
+........ .....|...+. ... ........|.|||..|..
T Consensus 923 ~d~~~~~y~~~n~~~~~~~P~~v~~----~~~-~~~~~~~~~~iNG~~~~~----------------------------- 968 (1065)
T 2j5w_A 923 FDENESWYLDDNIKTYSDHPEKVNK----DDE-EFIESNKMHAINGRMFGN----------------------------- 968 (1065)
T ss_dssp EEGGGSTTHHHHHHHHCSCGGGCCT----TCH-HHHHHTEEEEETTBCTTC-----------------------------
T ss_pred ecCCcceeeccCcccccCCccccCc----chh-hhhccCceEEECCccCCC-----------------------------
Confidence 000000000 00000000000 000 000001235666654421
Q ss_pred ccccCCCCCCCccccceEEEccCCCEEEEEEEeCC--cCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCC
Q 013385 294 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN--AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP 371 (444)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~--~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~ 371 (444)
...+.++.|++|+|+|.|.+ .+ .||||||||.|+|++++ |.
T Consensus 969 ---------------~~~~~v~~G~~vr~~l~N~g~~~~------~HpfHlHG~~F~vv~~~----------------p~ 1011 (1065)
T 2j5w_A 969 ---------------LQGLTMHVGDEVNWYLMGMGNEID------LHTVHFHGHSFQYKHRG----------------VY 1011 (1065)
T ss_dssp ---------------CCCCEEETTCEEEEEEEECCSTTC------CEEEEESSCCEEETTTT----------------CE
T ss_pred ---------------CccEEeCCCCEEEEEEEeCCCCCc------ceeEEEcccEEEEEecC----------------Cc
Confidence 11378899999999999974 34 89999999999999863 58
Q ss_pred ccceEEeCCCcEEEEEEEcCCceeeEEeccChhhHhcccEEEEecccc
Q 013385 372 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 419 (444)
Q Consensus 372 ~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 419 (444)
+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|.+...
T Consensus 1012 ~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~ 1059 (1065)
T 2j5w_A 1012 SSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQN 1059 (1065)
T ss_dssp EESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECC
T ss_pred eeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecC
Confidence 999999999999999999999999999999999999999999987654
No 20
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=1.2e-29 Score=247.87 Aligned_cols=225 Identities=17% Similarity=0.276 Sum_probs=154.4
Q ss_pred CceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCC----------
Q 013385 95 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 164 (444)
Q Consensus 95 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~---------- 164 (444)
..++|++++|+++|+||+|..... +.|+.+|..+. ++.||.++ +...|.|||+|+..+++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 336899999999999999999654 45777777666 68999985 34568999999999999761
Q ss_pred -CCcceEEEEEecCCC---C---CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccc
Q 013385 165 -PSYNYWISAGVRGRK---P---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 237 (444)
Q Consensus 165 -~~g~y~i~~~~~~~~---~---~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 237 (444)
..|.||......... . ....+..|++... .. ..+
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~------------------------------------~~---~pd 188 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG------------------------------------DV---LPD 188 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT------------------------------------CC---CCS
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCC------------------------------------CC---CCC
Confidence 125555544321110 0 1122222232210 00 013
Q ss_pred eEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCC
Q 013385 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 317 (444)
+++.+.+. .|.|||+.+.. . ..+.++.|
T Consensus 189 ~e~~l~~~--------d~~iNG~~~~~--------------------~------------------------~~l~v~~G 216 (343)
T 3cg8_A 189 ATHTIVFN--------DMTINNRKPHT--------------------G------------------------PDFEATVG 216 (343)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------C------------------------CCEEEETT
T ss_pred ceEEEEcc--------cceecccCCCC--------------------C------------------------ccEEeCCC
Confidence 44444431 27899986411 0 02889999
Q ss_pred CEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc---CCce
Q 013385 318 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---DNPG 394 (444)
Q Consensus 318 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a---dnpG 394 (444)
++|+|+|.|.+.+ .||||||||.|+|+.. |.+.. ....+.++||+.|.||+++.|+|++ +|||
T Consensus 217 e~vri~l~N~g~~------~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG 282 (343)
T 3cg8_A 217 DRVEIVMITHGEY------YHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAG 282 (343)
T ss_dssp CEEEEEEEEESSC------CEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred CEEEEEEEcCCcc------ccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCe
Confidence 9999999998766 9999999999999753 33320 0123578999999999999999995 8999
Q ss_pred eeEEeccChhhHhcccEEEEecccccccCCCCCCcccC
Q 013385 395 AWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 432 (444)
Q Consensus 395 ~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~ 432 (444)
.|+||||+++|++.||+.+|.+...+ ..+|.+.+.|-
T Consensus 283 ~w~~HCHi~~H~~~GM~g~~~V~~~~-~~~P~y~~~~~ 319 (343)
T 3cg8_A 283 AWMYHCHVQSHSDMGMVGLFLVKKPD-GTIPGYEPHEH 319 (343)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECTT-SCCSCC-----
T ss_pred eEEEeCCCHHHHhccCcEEEEEecCC-CCCCCCCCCCc
Confidence 99999999999999999999876532 34666666653
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=1.4e-29 Score=247.47 Aligned_cols=229 Identities=21% Similarity=0.249 Sum_probs=151.0
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEe---CCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~---DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
++|++++|+++|+||+|.... ..+|+.|-+++.+. ||.+. ++...|+|||||++.+++++ .|+||.+.
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 489999999999999999864 35777788888875 99863 34567999999999999975 79999987
Q ss_pred EecCCCCCC-CCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCC-CCCCCCCccceEEEEEecccccCC
Q 013385 174 GVRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALM-GSPKPPTNFHRRLTLLNTQNTING 251 (444)
Q Consensus 174 ~~~~~~~~~-~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~ 251 (444)
......... ....+.+...+.... ..+. + .+. .....+.+.. .....+.. . . .....
T Consensus 106 H~~~~~q~~~~Gl~G~liV~p~~~~-----~~~~-~--~d~----e~~l~l~d~~~~~~~~~~~-~-------g-~~~~~ 164 (339)
T 2zwn_A 106 HVNVNEHVGVRGMWGPLIVDPKQPL-----PIEK-R--VTK----DVIMMMSTWESAVADKYGE-G-------G-TPMNV 164 (339)
T ss_dssp CSSHHHHTTTSCCEEEEEEECSSCC-----TTGG-G--CSE----EEEEEEEEECGGGTTCTTC-C-------C-STTSC
T ss_pred cCCchhhhhcCCceEeEEecCCCcc-----cccc-c--CCc----eEEEEeeheecccccccCC-C-------C-CCccc
Confidence 643210001 112233322221100 0000 0 000 0000000000 00000000 0 0 00001
Q ss_pred eEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCC
Q 013385 252 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 331 (444)
Q Consensus 252 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 331 (444)
...|.|||..+.. ...+.++.|++++|+|.|.+..
T Consensus 165 ~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~vrlrliN~~~~- 199 (339)
T 2zwn_A 165 ADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDVVKIRFFGAGGG- 199 (339)
T ss_dssp CCEEEETTBCTTS--------------------------------------------SCCEEECTTCEEEEEEEECSSS-
T ss_pred cceEEEccccCCC--------------------------------------------cccEEECCCCEEEEEEEeCCCc-
Confidence 2357788765421 0127889999999999998865
Q ss_pred CCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccChhh------
Q 013385 332 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH------ 405 (444)
Q Consensus 332 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H------ 405 (444)
.||||||||.|+|++.+... +.+|.++||+.|++|+++.|+|++++||.|+||||+++|
T Consensus 200 -----~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~ 264 (339)
T 2zwn_A 200 -----IHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGK 264 (339)
T ss_dssp -----CEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTB
T ss_pred -----eEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccc
Confidence 89999999999999984321 124788999999999999999999999999999999999
Q ss_pred HhcccEEEEe
Q 013385 406 FHIGMGVVLA 415 (444)
Q Consensus 406 ~~~GM~~~~~ 415 (444)
+..||+++|.
T Consensus 265 ~~~gm~a~l~ 274 (339)
T 2zwn_A 265 HPGGPITVIE 274 (339)
T ss_dssp SSCSSEEEEE
T ss_pred cCCCcEEEEE
Confidence 7889998884
No 22
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.96 E-value=1.6e-29 Score=269.37 Aligned_cols=138 Identities=13% Similarity=0.091 Sum_probs=96.4
Q ss_pred ccccceeeeEEEECCCCCCCCCCC-CcceEEEEee------cCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcc
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSD------WWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSL 74 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~-D~e~~l~l~D------w~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~ 74 (444)
|+++||+|+|||+++.+....... .+|++|++++ |+++.....+..+.... +....+..+|||+... .
T Consensus 168 q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~--~~~~~~~~~ING~~~~--~- 242 (742)
T 2r7e_A 168 DLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAAS--ARAWPKMHTVNGYVNR--S- 242 (742)
T ss_dssp HHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCS--CCCCCCCCEETTBCTB--C-
T ss_pred HhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCcc--ccccCceEEECCccCC--C-
Confidence 788999999999998652211111 2788888764 66554322111111111 1234567899998642 1
Q ss_pred cccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcce-eEEEEEcCcceEEEEeCCccceeeEeeeEEecCCc
Q 013385 75 AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGE 153 (444)
Q Consensus 75 ~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~Ge 153 (444)
.+.+.+++|++|||||||+++.. .+.|+|+||.|+|++ ..+|.+.|.|||
T Consensus 243 ---------------------~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg--------~~~Dtv~v~Pg~ 293 (742)
T 2r7e_A 243 ---------------------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN--------HRQASLEISPIT 293 (742)
T ss_dssp ---------------------CCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT--------EECCSCCCCTTC
T ss_pred ---------------------CcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe--------EecceEEeCCCc
Confidence 13588999999999999999875 789999999999984 246888899999
Q ss_pred eEEEEEecCCCCCcceEEEEEe
Q 013385 154 SYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 154 R~dV~v~~~~~~~g~y~i~~~~ 175 (444)
+++|++++++ +|.|.+....
T Consensus 294 ~~~v~~~~~~--pG~w~~hCH~ 313 (742)
T 2r7e_A 294 FLTAQTLLMD--LGQFLLFCHI 313 (742)
T ss_dssp CCEEEECCCS--CSEECCCCCS
T ss_pred EEEEEEEeCC--CeeEEEEeCC
Confidence 9999999987 5777776554
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=1.5e-28 Score=234.92 Aligned_cols=217 Identities=14% Similarity=0.162 Sum_probs=153.0
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|+++.|+++++|+.|.... ...++++|.. ..+.||.+- ++...|.|||++++.+++++ +|+||......
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 489999999999999999755 4577888865 457899874 24467899999999999965 79999987653
Q ss_pred CCCCC-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccc---cCCe
Q 013385 177 GRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT---INGF 252 (444)
Q Consensus 177 ~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~ 252 (444)
....+ .....+.|...+... . + ..++++.+.+..-. ....
T Consensus 137 ~~~~~~~~Gl~G~liV~~~~~-------~---~--------------------------~~d~e~~l~~~d~~~~~g~~~ 180 (288)
T 3gdc_A 137 PLAPHIAKGLYGGFIVEPKEG-------R---P--------------------------PADDEMVMVMNGYNTDGGDDN 180 (288)
T ss_dssp SHHHHHHTTCEEEEEEECSSC-------C---C--------------------------CCSEEEEEEEEEECCSSTTCC
T ss_pred chHHHHhCcCeEEEEEeCCcc-------C---C--------------------------CCcceEEEEEeeEecCCCCCc
Confidence 20000 112233333331100 0 0 01222222221100 0112
Q ss_pred EEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCC
Q 013385 253 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 332 (444)
Q Consensus 253 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 332 (444)
..|.|||..|... .+ .+.++.|++|+|.|.|.+..
T Consensus 181 ~~~~iNG~~~~~~-------------------~~------------------------~l~v~~Ge~vr~~l~N~g~~-- 215 (288)
T 3gdc_A 181 EFYSVNGLPFHFM-------------------DF------------------------PVKVKQHELVRIHLINVLEY-- 215 (288)
T ss_dssp SEEEETTSTTHHH-------------------HS------------------------CEEEETTCCEEEEEEECCCS--
T ss_pred ceEEECccccccc-------------------Cc------------------------ccccCCCCEEEEEEEeCCCC--
Confidence 4688999876310 00 17889999999999998743
Q ss_pred CCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccChhhHhcccEE
Q 013385 333 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 412 (444)
Q Consensus 333 ~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~ 412 (444)
...||||||||.|+|++.|.. +..|.++||+.|+||+++.|+|++++||.|+||||+++|++.|||.
T Consensus 216 --~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~ 282 (288)
T 3gdc_A 216 --DPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMG 282 (288)
T ss_dssp --SSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEE
T ss_pred --CcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCE
Confidence 115999999999999985431 1346899999999999999999999999999999999999999999
Q ss_pred EEec
Q 013385 413 VLAL 416 (444)
Q Consensus 413 ~~~~ 416 (444)
.|.+
T Consensus 283 ~~~V 286 (288)
T 3gdc_A 283 FFEV 286 (288)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 24
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=1.8e-28 Score=237.15 Aligned_cols=231 Identities=17% Similarity=0.205 Sum_probs=150.1
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceE-EEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|+++.|+++++|+.|.... ...++.+|.... ..+.||.+- +....|+|||+++..+++++ .|+||.+...
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 489999999999999998754 457777776543 236899864 34467899999999999975 7999998765
Q ss_pred cCCCCC-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCC-CCCCCCccceEEEEEecccccCCeE
Q 013385 176 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG-SPKPPTNFHRRLTLLNTQNTINGFT 253 (444)
Q Consensus 176 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~ 253 (444)
...... .....+.|...+.... ..+. .. +.. ....+.+... ...... . .........
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~~-----~~~~--~~-d~e----~~l~l~dw~~~~~~~~~-~--------~~~~~~~~d 165 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNPL-----PIEK--TV-TKD----YILMLSDWVSSWANKPG-E--------GGIPGDVFD 165 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSCC-----HHHH--TC-CEE----EEEEEEEECGGGTTCTT-C--------CCCTTCCCC
T ss_pred ChhhhhccCCCEEEEEEcCCCcc-----cccc--cc-cce----eEEEEEeeccccccccc-c--------CCCCCCcCc
Confidence 211000 0112333333321100 0000 00 000 0000000000 000000 0 000000123
Q ss_pred EEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCC
Q 013385 254 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 333 (444)
Q Consensus 254 ~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 333 (444)
.|.|||+.|.. . ..+.++.|++|+|+|.|.+..
T Consensus 166 ~~~ING~~~~~--------------------~------------------------~~l~v~~G~~vrlrliN~~~~--- 198 (318)
T 3g5w_A 166 YYTINAKSFPE--------------------T------------------------QPIRVKKGDVIRLRLIGAGDH--- 198 (318)
T ss_dssp EEEETTBCBTS--------------------S------------------------CCEEECTTCEEEEEEEECSSS---
T ss_pred EEEEcCcCCCC--------------------C------------------------ccEEeCCCCEEEEEEEeCCCc---
Confidence 58888886521 0 027899999999999998866
Q ss_pred CCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccChhhHh------
Q 013385 334 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH------ 407 (444)
Q Consensus 334 ~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H~~------ 407 (444)
.||||||||.|+|+++..+. +.+|.++||+.|.||+++.|+|+++|||.|+||||+++|++
T Consensus 199 ---~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~ 265 (318)
T 3g5w_A 199 ---VHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPD 265 (318)
T ss_dssp ---CEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSS
T ss_pred ---eEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCC
Confidence 89999999999999984322 12568999999999999999999999999999999999998
Q ss_pred cccEEEEe
Q 013385 408 IGMGVVLA 415 (444)
Q Consensus 408 ~GM~~~~~ 415 (444)
.|||.+|.
T Consensus 266 ~Gm~~~i~ 273 (318)
T 3g5w_A 266 GGIMTTIE 273 (318)
T ss_dssp CBSEEEEE
T ss_pred CCCEEEEE
Confidence 58888885
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.95 E-value=9.2e-28 Score=265.80 Aligned_cols=156 Identities=12% Similarity=0.178 Sum_probs=112.2
Q ss_pred ccccceeeeEEEECCCCCCC--CCCCCcceEEEEe------ecCCCCHHHHHh-h--hcC-CCCCcCCCCCceEEcCCCC
Q 013385 2 QRSAGLYGSLIVDVADGEKE--PFHYDGEFNLLLS------DWWHRSVHEQEV-G--LSS-RPLRWIGEPQTLLINGRGQ 69 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~--p~~~D~e~~l~l~------Dw~~~~~~~~~~-~--~~~-~~~~~~~~~d~~liNG~~~ 69 (444)
|+++||+|+|||++++.... ++.+|+|++|+|+ ||++......+. + ... .+..+....+.++|||+..
T Consensus 188 qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~ 267 (1065)
T 2j5w_A 188 DIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTF 267 (1065)
T ss_dssp HHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTEET
T ss_pred HhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCccccccccccccccCcEEEECCccC
Confidence 56899999999999875332 3456899999999 677653222110 0 000 0000001234689999874
Q ss_pred CCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEeeeEE
Q 013385 70 FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMD 148 (444)
Q Consensus 70 ~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v~~~~ 148 (444)
. . .+.+.|++|++|||||||+|.. ..+.|+|+||+|+ ++|+.++++.
T Consensus 268 ~--~----------------------~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~ 315 (1065)
T 2j5w_A 268 G--S----------------------LSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTIN 315 (1065)
T ss_dssp T--C----------------------CCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEE
T ss_pred C--C----------------------CcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEE
Confidence 2 1 1358899999999999999986 6899999999999 3678999999
Q ss_pred ecCCceEEEEEecCCCCCcceEEEEEecCCCCCCCCeEEEEEEcC
Q 013385 149 IYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 193 (444)
Q Consensus 149 i~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~ 193 (444)
|+|||||||+|++++ +|.|+|+.....-. .....+.+++.+
T Consensus 316 I~pGer~dVlv~~~~--pG~y~i~~h~~~h~--~~Gm~~~~~V~~ 356 (1065)
T 2j5w_A 316 LFPATLFDAYMVAQN--PGEWMLSCQNLNHL--KAGLQAFFQVQE 356 (1065)
T ss_dssp ECBTCEEEEEEECCS--CEEEEEEECSHHHH--HTTCEEEEEEEC
T ss_pred ECCCcEEEEEEEeCC--CeeEEEEecCcchh--hCCCEEEEEEec
Confidence 999999999999987 68999988764211 123567788874
No 26
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=1.4e-27 Score=229.04 Aligned_cols=217 Identities=18% Similarity=0.260 Sum_probs=148.8
Q ss_pred CCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCC--------
Q 013385 93 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-------- 164 (444)
Q Consensus 93 ~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~-------- 164 (444)
+.+.|+|+++.|++++++|.|.... ...|+.+|..+. -+.||.++. .-.|.|||.+...+++...
T Consensus 54 t~PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~ 126 (299)
T 3t9w_A 54 TVPGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSW 126 (299)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred CccCceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcC
Confidence 4455799999999999999998754 446777776544 367998652 2247899999999988631
Q ss_pred ---CCcceEEEEEecCCCCC----CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccc
Q 013385 165 ---PSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 237 (444)
Q Consensus 165 ---~~g~y~i~~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 237 (444)
..|+||........... .....+.|...+. . . ...+
T Consensus 127 ~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~---------------------------------~-~---~~~d 169 (299)
T 3t9w_A 127 AEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQ---------------------------------G-D---LLPK 169 (299)
T ss_dssp ECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT---------------------------------T-C---CCCS
T ss_pred CCCCceeEEEecCCcccccchhhhcccccceEEEecc---------------------------------c-c---cCcc
Confidence 34667765543211100 0011222221100 0 0 0125
Q ss_pred eEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCC
Q 013385 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 317 (444)
+++.+.+. .|.+|+..+.. . ..+.++.|
T Consensus 170 ~e~~l~~~--------~~~~Ng~~~~~--------------------~------------------------p~l~v~~G 197 (299)
T 3t9w_A 170 RQFTVVFN--------DMMINNRAHHD--------------------A------------------------PTFEANLG 197 (299)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------C------------------------CEEEEETT
T ss_pred ccceeeee--------eeeecCccccc--------------------c------------------------ccceecCC
Confidence 55555442 37888876521 1 13789999
Q ss_pred CEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEE---EEEEEcCCce
Q 013385 318 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT---ALRFVADNPG 394 (444)
Q Consensus 318 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v---~irf~adnpG 394 (444)
++|+|+|.|.+.. .||||||||.|+|+..+..... ...+.++||+.|.||+.. +++|+++|||
T Consensus 198 e~Vr~~liN~~~~------~HpfHlHGh~F~v~~~g~~~~~--------~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG 263 (299)
T 3t9w_A 198 ERVEWIAIGHGSN------FHTFHLHGHRWLDNRTGMRTSE--------YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG 263 (299)
T ss_dssp CEEEEEEEEESSC------CCEEEETTCCEESSSSSSCCST--------TCCCCEESEEECCTTCEEEEEEETTTTTCSE
T ss_pred CEEEEEEEecccc------ceeeeEecceEEEEecccccCC--------cCCCCceeeEEeCCceeEEEEEEEeeCCCCe
Confidence 9999999998766 8999999999999887643322 234578999999999754 4556788999
Q ss_pred eeEEeccChhhHhcccEEEEecccc
Q 013385 395 AWAFHCHIEPHFHIGMGVVLALGVE 419 (444)
Q Consensus 395 ~w~~HCHi~~H~~~GM~~~~~~~~~ 419 (444)
.|+||||+++|++.|||++|.+...
T Consensus 264 ~w~~HCHi~~H~~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 264 MWMYHCHVQNHSDMGMAGMFLVRNA 288 (299)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEECT
T ss_pred eEEEEcCCHHHHhcCCeEEEEEECC
Confidence 9999999999999999999977553
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=1.3e-27 Score=226.91 Aligned_cols=215 Identities=17% Similarity=0.283 Sum_probs=152.4
Q ss_pred CceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCC----------
Q 013385 95 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 164 (444)
Q Consensus 95 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~---------- 164 (444)
+.++|+++.|+++++++.|.. .....++.+|..+.. +.||.+ +..-.|.||+++...+++++.
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 346899999999999999996 445677888876543 589987 234568999999999999752
Q ss_pred -CCcceEEEEEecCCC---CC-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceE
Q 013385 165 -PSYNYWISAGVRGRK---PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 239 (444)
Q Consensus 165 -~~g~y~i~~~~~~~~---~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 239 (444)
..|.||......... .+ .....+.|...+.. ... .|++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~----------------------------------~~~---~drE 149 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG----------------------------------DVL---PDAT 149 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------------------------CCC---CSEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCC----------------------------------Ccc---cccc
Confidence 246777765542211 00 00112222222100 000 1455
Q ss_pred EEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCE
Q 013385 240 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 319 (444)
+.+.+. .|.|||+.|.. .+ .+.++.|++
T Consensus 150 ~~l~l~--------~~~iNG~~~~~--------------------~p------------------------~i~v~~G~~ 177 (276)
T 3kw8_A 150 HTIVFN--------DMTINNRKPHT--------------------GP------------------------DFEATVGDR 177 (276)
T ss_dssp EEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETTCE
T ss_pred eEEEec--------ccccceecccC--------------------CC------------------------CEEEecCCE
Confidence 554432 38999987631 00 288999999
Q ss_pred EEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC---Cceee
Q 013385 320 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPGAW 396 (444)
Q Consensus 320 v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad---npG~w 396 (444)
|+|+|.|.+.+ .||||||||.|+|++. |.++.. ...+.++||+.|.||+++.++|+++ |||.|
T Consensus 178 vri~l~N~~~~------~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 178 VEIVMITHGEY------YHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEecCCCc------ceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 99999998766 8999999999999864 333210 1234799999999999999999987 89999
Q ss_pred EEeccChhhHhcccEEEEecccc
Q 013385 397 AFHCHIEPHFHIGMGVVLALGVE 419 (444)
Q Consensus 397 ~~HCHi~~H~~~GM~~~~~~~~~ 419 (444)
+||||+++|++.|||.+|.+.+.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECT
T ss_pred EEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999976653
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=3.4e-26 Score=221.01 Aligned_cols=216 Identities=17% Similarity=0.258 Sum_probs=147.1
Q ss_pred CCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCC---------
Q 013385 93 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ--------- 163 (444)
Q Consensus 93 ~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~--------- 163 (444)
+.+.|+|+++.|++++++|.|.... ...|+.+|..+. -+.||.++ ..-.|.|||++...+++..
T Consensus 38 t~PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~-~~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~ 110 (313)
T 3tas_A 38 TIPGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYE-ISSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTW 110 (313)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cccCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCC-ccCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccc
Confidence 3455789999999999999998754 346777776543 25799764 1224889999999888753
Q ss_pred --CCCcceEEEEEecCCCCC----CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccc
Q 013385 164 --DPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 237 (444)
Q Consensus 164 --~~~g~y~i~~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 237 (444)
...|.||........... .....+.|...+. .....|
T Consensus 111 ~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~-------------------------------------~~~~~d 153 (313)
T 3tas_A 111 RAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK-------------------------------------GDVLPD 153 (313)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT-------------------------------------TCBCCS
T ss_pred cCCCceEEEEeecCcccccchhhhhccccCceEeecc-------------------------------------cccccc
Confidence 123666665443211000 0011122211100 001125
Q ss_pred eEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCC
Q 013385 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 317 (444)
+++.+.+. .|.+|+..+.. .+ .+.++.|
T Consensus 154 ~e~~l~~~--------d~t~Ng~~~~~--------------------~~------------------------~l~v~~G 181 (313)
T 3tas_A 154 RTHTIVFN--------DMTINNRPAHT--------------------GP------------------------DFEATVG 181 (313)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETT
T ss_pred ccceeecc--------chhcccCCccc--------------------cc------------------------ccccccC
Confidence 55555442 37888875421 11 2788999
Q ss_pred CEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEE---cCCce
Q 013385 318 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV---ADNPG 394 (444)
Q Consensus 318 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~---adnpG 394 (444)
++|+|+|.|.+.+ .||||||||.|+|+..+.... ....|.++||+.|.|++.+.++|. ++|||
T Consensus 182 e~vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG 247 (313)
T 3tas_A 182 DRVEFVMITHGEY------YHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAG 247 (313)
T ss_dssp CEEEEEEEEESSC------CEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred CEEEEEEeccccc------ceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCE
Confidence 9999999998876 899999999999998754321 124578999999999998877765 56899
Q ss_pred eeEEeccChhhHhcccEEEEeccc
Q 013385 395 AWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 395 ~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
.|+||||+++|++.|||++|.+..
T Consensus 248 ~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 248 AWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEeCChHHHHCCCeEEEEEEC
Confidence 999999999999999999996543
No 29
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.91 E-value=1.5e-24 Score=210.84 Aligned_cols=165 Identities=18% Similarity=0.186 Sum_probs=127.8
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhh-hcCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG-LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~-~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
|+.+||+|+|||++++. .| .+|+|++|+++||+++......-. ...........++.++|||+..++|.
T Consensus 143 ~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~------- 212 (327)
T 1kbv_A 143 HIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTG------- 212 (327)
T ss_dssp HHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTSG-------
T ss_pred hhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCCCC-------
Confidence 77899999999998753 23 579999999999999753110000 00000000235789999999886321
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEe
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~ 160 (444)
| +.+.+++|++|||||||+|+.+.+.|+|+||+|+||+.||.+++|+.++++.|++||||||+|+
T Consensus 213 -----~----------~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~ 277 (327)
T 1kbv_A 213 -----D----------NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFK 277 (327)
T ss_dssp -----G----------GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred -----c----------eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEE
Confidence 1 3689999999999999999989999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceEEEEEecCCCCCCCCeEEEEEEcCC
Q 013385 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 194 (444)
Q Consensus 161 ~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~ 194 (444)
+++ +|+|||+......+ ......|+|+|.+.
T Consensus 278 ~~~--pG~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 278 VDI--PGNYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp ECS--CEEEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred eCC--CeEEEEEecccccc-ccCCcEEEEEECCC
Confidence 997 68999998764431 12346899999853
No 30
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=1.3e-25 Score=216.34 Aligned_cols=226 Identities=12% Similarity=0.125 Sum_probs=130.2
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce----eeEeeeEEecCCceEEEEEecCCCC-------
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDP------- 165 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~----p~~v~~~~i~~GeR~dV~v~~~~~~------- 165 (444)
|+|++++|+++|+||+|... ..+.|+.+|..+. .+.||.+.. +.......|+||||++..+++++..
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 58999999999999999764 4455666665532 268998762 2233457899999999999998732
Q ss_pred -CcceEEEEEecCCC--CCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEE
Q 013385 166 -SYNYWISAGVRGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 242 (444)
Q Consensus 166 -~g~y~i~~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 242 (444)
.|+||.+....... .....+ ++|.......... +..+.. +.. +...+...
T Consensus 138 ~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~~-----~~~~~~-d~e----~~l~~~d~---------------- 190 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTED-----GTQKMF-EKQ----HVLMFAVF---------------- 190 (306)
T ss_dssp SEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCTT-----SSBSSS-CCC----CCCBCCEE----------------
T ss_pred CceEEEEeccCCchhhhccCceE-EEEEccCCCCCcc-----CCcCcc-cce----EEEEEEec----------------
Confidence 27999988742210 112333 3444432211100 000000 000 00000000
Q ss_pred Eeccc-ccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEE
Q 013385 243 LNTQN-TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 321 (444)
Q Consensus 243 ~~~~~-~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 321 (444)
..... .......|.|||..+.. . | .+.++.|++++
T Consensus 191 d~~~~~~~~~~~~~~ING~~~~~--~-------------------p-----------------------~l~v~~G~~vr 226 (306)
T 1sdd_A 191 DESKSWNQTSSLMYTVNGYVNGT--M-------------------P-----------------------DITVCAHDHIS 226 (306)
T ss_dssp ETTSSSSCCCCEEECSSSCCSSC--C-------------------C-----------------------CCCCCCC----
T ss_pred ccccccccCCCcceeeCCEecCC--C-------------------c-----------------------ceEEcCCCEEE
Confidence 00000 00112347888876521 0 0 15678999999
Q ss_pred EEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEecc
Q 013385 322 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 401 (444)
Q Consensus 322 ~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCH 401 (444)
|.|.|.+.. ...||||||||.|++ +| .++||+.|.||+++.|+|++++||.|+||||
T Consensus 227 lrliN~g~~----~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch 283 (306)
T 1sdd_A 227 WHLIGMSSG----PELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASL 283 (306)
T ss_dssp --BBCCCSS----SCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCC
T ss_pred EEEEeCCCC----CccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeC
Confidence 999997643 127999999999986 12 4589999999999999999999999999999
Q ss_pred ChhhHhcccEEEEeccc
Q 013385 402 IEPHFHIGMGVVLALGV 418 (444)
Q Consensus 402 i~~H~~~GM~~~~~~~~ 418 (444)
+++|++.||+++|.+.+
T Consensus 284 ~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 284 IPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp STTTGGGTCBCCC----
T ss_pred ChHHHhcCCeEEEEEec
Confidence 99999999999997654
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.90 E-value=2.7e-23 Score=220.06 Aligned_cols=245 Identities=16% Similarity=0.193 Sum_probs=143.0
Q ss_pred CCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCcccee----eEeeeEEecCCceEEEEEecCCCC----
Q 013385 94 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP----FEVDDMDIYSGESYSVLLTTNQDP---- 165 (444)
Q Consensus 94 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p----~~v~~~~i~~GeR~dV~v~~~~~~---- 165 (444)
-+.|+|++++|+++++||+|.... .+.|+.+|..+. .++||.+... ..+....|.|||+++..+++++..
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~ 143 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPEN 143 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCS
T ss_pred CcCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCC
Confidence 345799999999999999999854 345555555443 5899987532 234467899999999999998742
Q ss_pred Cc----ceEEEEEecCCC--CCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCcccccccc-ccc-cCCCCCCCCCccc
Q 013385 166 SY----NYWISAGVRGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSN-KIF-ALMGSPKPPTNFH 237 (444)
Q Consensus 166 ~g----~y~i~~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~-~~~-~~~~~~~~p~~~~ 237 (444)
+| +||.+....... ...+.+ ++|......... .+..|. .+......+.. ... +.. ..... .
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~-----~~~~~~-~~~e~~l~l~~~d~~~~w~-~~~~~---~ 212 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDK-----ETNMPV-DMREFVLLFMVFDEKKSWY-YDKKP---T 212 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCT-----TSCCCS-SCCEEEEEEEEEEGGGSSC-CC-------
T ss_pred CCCCceEEEEccCCCCcccccccCcc-CEEEeeCCCccc-----ccCCCC-cceeEEEEEEeecCccccc-cccCc---c
Confidence 47 999988753211 012223 333333211100 000111 00000000000 000 000 00000 0
Q ss_pred eEEEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCC
Q 013385 238 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 317 (444)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 317 (444)
..+... ..........+.|||..+.. | .+.++.|
T Consensus 213 ~~~~~~-~~~~~~~~~~~~iNG~~~~~---p------------------------------------------~l~v~~G 246 (647)
T 1sdd_B 213 RSWRRA-SSEVKNSHEFHAINGMIYNL---P------------------------------------------GLRMYEQ 246 (647)
T ss_dssp ------------CCCEEEEETTBSSCC---C------------------------------------------CCEEETT
T ss_pred cccccC-CcchhhcCceeccCCEecCC---C------------------------------------------CeEEcCC
Confidence 000000 00000112457788876410 0 2678999
Q ss_pred CEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeE
Q 013385 318 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 397 (444)
Q Consensus 318 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~ 397 (444)
++|+|+|.|.+.. ...||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++||.|+
T Consensus 247 ~~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~ 306 (647)
T 1sdd_B 247 EWVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWL 306 (647)
T ss_dssp CEEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEE
T ss_pred CEEEEEEEeCCCC----CcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEee
Confidence 9999999997642 1279999999999999752 4689999999999999999999999999
Q ss_pred EeccChhhHhcccEEEEecc
Q 013385 398 FHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 398 ~HCHi~~H~~~GM~~~~~~~ 417 (444)
||||+.+|++.||+++|.+.
T Consensus 307 ~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 307 LDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp EECCCHHHHTTTCEEEEEEE
T ss_pred cccCcccccccccccceeee
Confidence 99999999999999999874
No 32
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.88 E-value=5.7e-22 Score=191.62 Aligned_cols=159 Identities=20% Similarity=0.263 Sum_probs=121.8
Q ss_pred ccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCCCc
Q 013385 4 SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 83 (444)
Q Consensus 4 ~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~~~ 83 (444)
.+||+|+|||++++....+..+|+|++|+|+||+++...+ +...+.. ...++.++|||+..++.
T Consensus 114 ~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~----~~~~~~~-~~~~d~~~ING~~~~~~----------- 177 (318)
T 3g5w_A 114 MRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANK----PGEGGIP-GDVFDYYTINAKSFPET----------- 177 (318)
T ss_dssp HSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTC----TTCCCCT-TCCCCEEEETTBCBTSS-----------
T ss_pred cCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccc----cccCCCC-CCcCcEEEEcCcCCCCC-----------
Confidence 4899999999988542222357899999999999864321 1111111 23578899999986511
Q ss_pred cccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc-eeeEeeeEEecCCceEEEEEecC
Q 013385 84 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTN 162 (444)
Q Consensus 84 ~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~dV~v~~~ 162 (444)
..+.+++|++|||||+|++.. .+.|+|+||.|+||+.||.++ +|..++++.|+||||+||+++++
T Consensus 178 -------------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~ 243 (318)
T 3g5w_A 178 -------------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD 243 (318)
T ss_dssp -------------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC
T ss_pred -------------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC
Confidence 148999999999999999976 679999999999999999998 79999999999999999999998
Q ss_pred CCCCcceEEEEEecCCCCC----CCCeEEEEEEcCC
Q 013385 163 QDPSYNYWISAGVRGRKPA----TPPALTLLNYHPT 194 (444)
Q Consensus 163 ~~~~g~y~i~~~~~~~~~~----~~~~~ail~y~~~ 194 (444)
+ +|.|.++.....-... .....++|.|.+.
T Consensus 244 ~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 244 N--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp S--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred C--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 6 6888888765432211 1344788999854
No 33
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.88 E-value=4.5e-23 Score=209.11 Aligned_cols=166 Identities=16% Similarity=0.187 Sum_probs=127.6
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHH-hhhcCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE-VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~-~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
|+.+||+|+|||++++. .| .||+|++|+|+||++....... ............+++.+||||+....
T Consensus 133 ~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~--------- 200 (442)
T 2zoo_A 133 HIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGST--------- 200 (442)
T ss_dssp HHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTT---------
T ss_pred HHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCC---------
Confidence 67899999999998753 23 6799999999999987641100 00000000002478999999997531
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEe
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 160 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~ 160 (444)
...+.+.+++|++|||||+|+|....+.|+|+||+|+||+.||.+++|..++++.|+||||+||+|+
T Consensus 201 -------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~ 267 (442)
T 2zoo_A 201 -------------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFK 267 (442)
T ss_dssp -------------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred -------------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEE
Confidence 0113689999999999999999988999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceEEEEEecCCCCCCCCeEEEEEEcCCC
Q 013385 161 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 195 (444)
Q Consensus 161 ~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~ 195 (444)
+++ +|+|+++....... ......++|+|.+..
T Consensus 268 ~~~--~G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 268 VEV--PGTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp CCS--CEEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred cCC--CCeEEEEecccccc-cccCceEEEEecCCC
Confidence 987 68999988654321 123568999998543
No 34
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.87 E-value=4.8e-21 Score=187.06 Aligned_cols=161 Identities=17% Similarity=0.253 Sum_probs=121.6
Q ss_pred ccc-cceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 2 QRS-AGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 2 Q~~-dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
|+. +||+|+|||++++....+..+|+|++|+|+||++.... ....+......++.++|||+..+.
T Consensus 112 q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~-----~~~~~g~~~~~~~~~~ING~~~~~--------- 177 (339)
T 2zwn_A 112 HVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVAD-----KYGEGGTPMNVADYFSVNAKSFPL--------- 177 (339)
T ss_dssp HTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTT-----CTTCCCSTTSCCCEEEETTBCTTS---------
T ss_pred hhhcCCceEeEEecCCCcccccccCCceEEEEeeheeccccc-----ccCCCCCCccccceEEEccccCCC---------
Confidence 566 99999999998765322334589999999999973211 111111101257889999987641
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce-eeEeeeEEecCCceEEEEE
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-PFEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-p~~v~~~~i~~GeR~dV~v 159 (444)
...+.+++|++|||||+|++.. .+.|+|+||+|+||+.||.+++ |..++++.|+||||+||+|
T Consensus 178 ---------------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~ 241 (339)
T 2zwn_A 178 ---------------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVII 241 (339)
T ss_dssp ---------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred ---------------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEE
Confidence 1258999999999999999954 8999999999999999999995 8899999999999999999
Q ss_pred ecCCCCCcceEEEEEecCCCC----CCCCeEEEEEEcCC
Q 013385 160 TTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPT 194 (444)
Q Consensus 160 ~~~~~~~g~y~i~~~~~~~~~----~~~~~~ail~y~~~ 194 (444)
++++ +|.|+++.....-+. ......++|+|.+.
T Consensus 242 ~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 242 EADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp ECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9987 578888876543211 12344789999853
No 35
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.86 E-value=4.5e-21 Score=186.32 Aligned_cols=233 Identities=13% Similarity=0.054 Sum_probs=146.8
Q ss_pred eEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|++++|+++|+|++|.... ..+.++++|.. +.||.+. ...|.|||++++.+++++ +|+||.+...
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 45667777653 5788753 224899999999999987 6999998754
Q ss_pred cCCCCC--CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeE
Q 013385 176 RGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT 253 (444)
Q Consensus 176 ~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 253 (444)
.....+ ..-.-+++.+. .. .. |.... ..... +.+... ..... ......+...........
T Consensus 138 ~~~~~~~~~Gl~G~~iV~~-~~-------~~---p~~d~-e~~l~----~~d~~~-~~~~~-~~g~~~~~~~~~~~~~~~ 199 (327)
T 1kbv_A 138 APVGMHIANGMYGLILVEP-KE-------GL---PKVDK-EFYIV----QGDFYT-KGKKG-AQGLQPFDMDKAVAEQPE 199 (327)
T ss_dssp SSHHHHHHTTCEEEEEEEC-TT-------CC---CCCSE-EEEEE----EEEECB-SSCTT-CCEEECBCHHHHHHTCCS
T ss_pred CChhhhhhcceEEEEEEec-CC-------CC---CCCce-EEEEE----eeeeec-cCccc-cccccccChhHhccCCCc
Confidence 210001 11122333332 11 01 11110 00000 000000 00000 000000000000001123
Q ss_pred EEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCC
Q 013385 254 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 333 (444)
Q Consensus 254 ~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 333 (444)
.+.|||..+..- ....+.++.|++++|.|.|.+..
T Consensus 200 ~~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~~~~--- 234 (327)
T 1kbv_A 200 YVVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNGGPN--- 234 (327)
T ss_dssp EEEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEEESS---
T ss_pred eEEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECCCCC---
Confidence 577888765210 00137899999999999997642
Q ss_pred CCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccChhhH-hcccEE
Q 013385 334 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMGV 412 (444)
Q Consensus 334 ~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H~-~~GM~~ 412 (444)
..|+||||||.|+|++...+. ..|.++|++.|.+|+++.|.|++++||.|+||||+.+|. ..||++
T Consensus 235 --~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a 301 (327)
T 1kbv_A 235 --LVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALG 301 (327)
T ss_dssp --CCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEE
T ss_pred --CceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEE
Confidence 189999999999999985432 236889999999999999999999999999999999995 889988
Q ss_pred EEecc
Q 013385 413 VLALG 417 (444)
Q Consensus 413 ~~~~~ 417 (444)
+|...
T Consensus 302 ~l~~~ 306 (327)
T 1kbv_A 302 QLKVE 306 (327)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 88643
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.86 E-value=8.6e-23 Score=217.92 Aligned_cols=85 Identities=20% Similarity=0.419 Sum_probs=76.6
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|++|+|.|.|.+.. ...||||||||.|+|++.+ +.++||+.|.||+++.|+|++|
T Consensus 370 l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCS
T ss_pred eEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeC
Confidence 6789999999999997643 1279999999999999863 2489999999999999999999
Q ss_pred CceeeEEeccChhhHhcccEEEEec
Q 013385 392 NPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 392 npG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+||.|+||||+++|++.|||++|.+
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred CCCceEEEecccccccccccccccc
Confidence 9999999999999999999999977
No 37
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=1.7e-20 Score=183.59 Aligned_cols=88 Identities=26% Similarity=0.337 Sum_probs=75.3
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCC--ccceEEeCCCcEEEEEEE
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~v~irf~ 389 (444)
+.++.|++++|++.|.+.. .|++|+|||.|+|++ +|.+. +++ ++||+.|.+|+.+.|.|+
T Consensus 233 l~v~~G~r~Rl~n~~~~~~------~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 233 LTAAVGERVLVVHSQANRD------TRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEEEE
T ss_pred eEcCCCCEEEEEECCCCCc------cceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEEEE
Confidence 8899999999888877665 899999999999986 34332 233 479999999999999999
Q ss_pred cCCceeeEEeccCh-hhHhcccEEEEecc
Q 013385 390 ADNPGAWAFHCHIE-PHFHIGMGVVLALG 417 (444)
Q Consensus 390 adnpG~w~~HCHi~-~H~~~GM~~~~~~~ 417 (444)
+++||.|+||||++ .|++.|||++|.+.
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 99999999999999 59999999998653
No 38
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=2.2e-19 Score=175.11 Aligned_cols=88 Identities=23% Similarity=0.189 Sum_probs=72.4
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCC--ccceEEeCCCcEEEEEEE
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~v~irf~ 389 (444)
+.++.|++++|++.|.+.. .|++++|||.|+|++ +|.+. .++ ++||+.|.+|+.+.|.|+
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEEE
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEEE
Confidence 7889999999887776643 455557788888887 34432 222 589999999999999999
Q ss_pred cCCceeeEEeccChhhH-hcccEEEEecc
Q 013385 390 ADNPGAWAFHCHIEPHF-HIGMGVVLALG 417 (444)
Q Consensus 390 adnpG~w~~HCHi~~H~-~~GM~~~~~~~ 417 (444)
+++||.|+||||++.|+ +.|||++|.+.
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 99999999999999997 99999999654
No 39
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.83 E-value=2.4e-20 Score=182.20 Aligned_cols=164 Identities=18% Similarity=0.166 Sum_probs=117.0
Q ss_pred ccccceeeeEEEECCCCC----CCCCCCCcceEEEEeecCCCCH--HHHHhhhcCCCCC--------cCCCCCceEEcCC
Q 013385 2 QRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRSV--HEQEVGLSSRPLR--------WIGEPQTLLINGR 67 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~----~~p~~~D~e~~l~l~Dw~~~~~--~~~~~~~~~~~~~--------~~~~~d~~liNG~ 67 (444)
|+.+||+|+|||+++++. ..|..||+|++|+++||++... +++ ..+...+.. ....++.++|||+
T Consensus 139 ~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~liNG~ 217 (336)
T 1oe1_A 139 HVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKY-KDYATLAESYGDTVQVMRTLTPSHIVFNGK 217 (336)
T ss_dssp HHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSB-CCCSSTGGGHHHHHHHHHTTCCSEEEETTS
T ss_pred HHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCce-eecccccccccchhhHhhcCCCCEEEECCe
Confidence 788999999999987542 2356789999999999998521 111 001000000 0246789999999
Q ss_pred CCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEE-EEcCcceEEEEeCCccceee--Ee
Q 013385 68 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNL-AVKNHKMVVVEADGNYVQPF--EV 144 (444)
Q Consensus 68 ~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~-~i~~h~~~via~DG~~v~p~--~v 144 (444)
....|. .+.+.|++|++||| +|+++.+.+.+ .|++|.++|++ ||.+++|. .+
T Consensus 218 ~~~~~~----------------------~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~ 272 (336)
T 1oe1_A 218 VGALTG----------------------ANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDL 272 (336)
T ss_dssp TTTTSG----------------------GGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEE
T ss_pred eccCCC----------------------CcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccc
Confidence 875221 13689999997765 66666655554 46999999997 99999764 36
Q ss_pred eeEEecCCceEEEEEecCCCCCcceEEEEEecCCCCCCCCeEEEEEEcCC
Q 013385 145 DDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 194 (444)
Q Consensus 145 ~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~ 194 (444)
+++.|++||||||+|++++ +|+|+++....... ......|+++|.+.
T Consensus 273 dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~-~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 273 ETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEA-FELGAAGHIKVEGK 319 (336)
T ss_dssp SBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred eEEEECCCCcEEEEEEcCC--CceEEEEechhhcc-ccCCCeEEEEECCC
Confidence 8999999999999999997 68999988754211 02346789999743
No 40
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.80 E-value=4.1e-19 Score=173.21 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=117.4
Q ss_pred ccccceeeeEEEECCCCC----CCCCCCCcceEEEEeecCCCC--HHHH---------Hh---hhcCCCCCcCCCCCceE
Q 013385 2 QRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRS--VHEQ---------EV---GLSSRPLRWIGEPQTLL 63 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~----~~p~~~D~e~~l~l~Dw~~~~--~~~~---------~~---~~~~~~~~~~~~~d~~l 63 (444)
|+.+||+|+|||++++.. ..|+.||+|++|+++||++.. .+.+ +. ..+. ...++.++
T Consensus 139 ~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 213 (333)
T 1mzy_A 139 HVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMD-----TLIPSHIV 213 (333)
T ss_dssp HHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHT-----TTCCSEEE
T ss_pred hhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccccccccccccccccccchhHHhh-----ccCCcEEE
Confidence 788999999999987542 235678999999999999931 1111 00 0010 23678999
Q ss_pred EcCCCCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCcccee-e
Q 013385 64 INGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP-F 142 (444)
Q Consensus 64 iNG~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p-~ 142 (444)
|||+... + ...+.+.|++|++||||++|++....+.+ +++|.++||+ ||.++++ .
T Consensus 214 ING~~~~-------~---------------~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~-i~~h~~~Vi~-dG~~~~~p~ 269 (333)
T 1mzy_A 214 FNGAVGA-------L---------------TGEGALKAKVGDNVLFVHSQPNRDSRPHL-IGGHGDLVWE-TGKFHNAPE 269 (333)
T ss_dssp ETTSTTT-------T---------------SGGGCEEEETTCEEEEEEEESSSCBCEEE-ETCCEEEEET-TCCTTSCCE
T ss_pred ECCcccc-------c---------------CCCcceEecCCCEEEEEECCCCCccccEE-ECCCCeEEEe-CCcccCCCc
Confidence 9999753 1 00135899999999988877765555544 8999999999 9999964 4
Q ss_pred -EeeeEEecCCceEEEEEecCCCCCcceEEEEEecCCCCCCCCeEEEEEEcC
Q 013385 143 -EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 193 (444)
Q Consensus 143 -~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~ 193 (444)
.++++.|++|||+||+|++++ +|+|++........ ......++++|.+
T Consensus 270 ~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~-~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 270 RDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEA-VHKGATAHVLVEG 318 (333)
T ss_dssp EEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTCCEEEEEEES
T ss_pred cCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhH-hhCCCEEEEEEcC
Confidence 489999999999999999997 59999988764321 0234578899974
No 41
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.80 E-value=5.7e-21 Score=203.56 Aligned_cols=243 Identities=14% Similarity=0.085 Sum_probs=143.0
Q ss_pred CCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce----eeEeeeEEecCCceEEEEEecCCC-----
Q 013385 94 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQD----- 164 (444)
Q Consensus 94 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~----p~~v~~~~i~~GeR~dV~v~~~~~----- 164 (444)
...|+|+++.|+++++++.|.... ...|+.+|..+.- +.||.+-. +..+..-.|.||+++...+++.+.
T Consensus 72 ~pGP~Ir~~~GD~v~V~v~N~l~~-~tsIHwHGl~~~~-~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~ 149 (742)
T 2r7e_A 72 LLGPTIQAEVYDTVVITLKNMASH-PVSLHAVGVSYWK-ASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMA 149 (742)
T ss_dssp TSEEEEEECSEEEEECCEECCSSS-CCCCCCSSSCCCS-SSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCS
T ss_pred CcCCeEEEECCCEEEEEEEECCCC-CEeEEecCcccCc-cccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCc
Confidence 345899999999999999998643 3445555544322 57887641 112445568999999999997531
Q ss_pred ---CCcceEEEEEecCCCC--CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceE
Q 013385 165 ---PSYNYWISAGVRGRKP--ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 239 (444)
Q Consensus 165 ---~~g~y~i~~~~~~~~~--~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 239 (444)
+.|+||.+........ ....+. +|....... .. .......+............+... ... ....
T Consensus 150 ~d~~~GT~wYHsH~~~~~q~~~GL~G~-lIV~~~~~~---~~---~~~~~~~e~~l~~~~~de~~~w~~-~~~---~~~~ 218 (742)
T 2r7e_A 150 SDPLCLTYSYLSHVDLVKDLNSGLIGA-LLVCREGSL---AK---EKTQTLHKFILLFAVFDEGKSWHS-ETK---NSLM 218 (742)
T ss_dssp SSCSSCCEEECCCSCSHHHHHHHCCEE-EEECSSSCT---TT---TTTTCCCEECCCEECCCCSSSSCC-CCC---C---
T ss_pred CCCCcEEEEEccCCChHHHhhCCcEEE-EEEecCccc---Cc---ccCceeeEEEEEeecccCCccccc-ccc---cccc
Confidence 2489999876532100 112222 222221110 00 000000110000000000000000 000 0000
Q ss_pred EEEEecccccCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCE
Q 013385 240 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 319 (444)
Q Consensus 240 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 319 (444)
..+... ........|.|||..+.. ...+.++.|++
T Consensus 219 ~~~~~~-~~~~~~~~~~ING~~~~~--------------------------------------------~~~l~v~~Ge~ 253 (742)
T 2r7e_A 219 QDRDAA-SARAWPKMHTVNGYVNRS--------------------------------------------LPGLIGCHRKS 253 (742)
T ss_dssp ----CC-SCCCCCCCCEETTBCTBC--------------------------------------------CCCCEECSSSC
T ss_pred ccCCCc-cccccCceEEECCccCCC--------------------------------------------CcceEEcCCCE
Confidence 000000 000011236677765310 01268899999
Q ss_pred EEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEe
Q 013385 320 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 399 (444)
Q Consensus 320 v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~H 399 (444)
|+|.|.|.+.+ ...||||||||.|+|++ .++||+.|.|++.+.|+|++++||.|+||
T Consensus 254 vrlrliN~g~~----~~~h~~hlhGh~f~Vvg-------------------~~~Dtv~v~Pg~~~~v~~~~~~pG~w~~h 310 (742)
T 2r7e_A 254 VYWHVIGMGTT----PEVHSIFLEGHTFLVRN-------------------HRQASLEISPITFLTAQTLLMDLGQFLLF 310 (742)
T ss_dssp EEEECCCCCSS----SCCCCCCCTTCCCEETT-------------------EECCSCCCCTTCCCEEEECCCSCSEECCC
T ss_pred EEEEEEeCCCC----CcceEEEECCCEEEEEe-------------------EecceEEeCCCcEEEEEEEeCCCeeEEEE
Confidence 99999997754 11699999999999984 35899999999999999999999999999
Q ss_pred ccChhhHhcccEEEEecc
Q 013385 400 CHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 400 CHi~~H~~~GM~~~~~~~ 417 (444)
||+++|++.|||.+|.+.
T Consensus 311 CH~~~H~~~GM~~~~~V~ 328 (742)
T 2r7e_A 311 CHISSHQHDGMEAYVKVD 328 (742)
T ss_dssp CCSSSSSTTSCCBCEEEC
T ss_pred eCChhHHhCCCeEEEEEe
Confidence 999999999999998654
No 42
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.78 E-value=2.2e-19 Score=175.70 Aligned_cols=163 Identities=14% Similarity=0.114 Sum_probs=114.8
Q ss_pred ccccceeeeEEEECCCCC----CCCCCCCcceEEEEeecCCC--CHHHH---------HhhhcCCCCCcCCCCCceEEcC
Q 013385 2 QRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR--SVHEQ---------EVGLSSRPLRWIGEPQTLLING 66 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~----~~p~~~D~e~~l~l~Dw~~~--~~~~~---------~~~~~~~~~~~~~~~d~~liNG 66 (444)
|+.+||+|+|||+++++. ..|..||+|++|+++||++. ..+.+ ....... . ....++.++|||
T Consensus 145 ~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~iNG 222 (340)
T 2bw4_A 145 HVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-M-RTLTPTHIVFNG 222 (340)
T ss_dssp HHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-H-HTTCCSEEEETT
T ss_pred HHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCcccccccccccccchhhH-h-hcCCCCEEEECC
Confidence 788999999999987531 23567899999999999984 21111 0000000 0 023578999999
Q ss_pred CCCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce-ee-Ee
Q 013385 67 RGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-PF-EV 144 (444)
Q Consensus 67 ~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-p~-~v 144 (444)
+..... ..+.+.+++|++|||+++|++....+. .+++|.++|++ ||.++. |. .+
T Consensus 223 ~~~~~~----------------------~~~~l~v~~G~r~Rl~n~~~~~~~~~~-~i~gh~~~Vi~-dG~~~~~p~~~~ 278 (340)
T 2bw4_A 223 AVGALT----------------------GDHALTAAVGERVLVVHSQANRDTRPH-LIGGHGDYVWA-TGKFRNPPDLDQ 278 (340)
T ss_dssp STTTTS----------------------GGGCEEEETTCEEEEEEEESSSCBCEE-EETCCEEEEET-TCCTTSCCEEEE
T ss_pred ccCCcc----------------------CCCceEcCCCCEEEEEECCCCCccceE-EecCcceEEeC-CCcccCCccccc
Confidence 986310 023689999998887776665444443 38999999997 999985 43 58
Q ss_pred eeEEecCCceEEEEEecCCCCCcceEEEEEecCCCCCCCCeEEEEEEcC
Q 013385 145 DDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 193 (444)
Q Consensus 145 ~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~ 193 (444)
+++.|++|||+||+|++++ +|+|+++....... ......++++|.+
T Consensus 279 dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h-~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 279 ETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEA-FELGAAGHFKVTG 324 (340)
T ss_dssp SCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEES
T ss_pred eEEEeCCCceEEEEEECCC--CeeeEEEcCchHHH-HhCCCEEEEEECC
Confidence 9999999999999999997 59999988764211 0123568889874
No 43
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.77 E-value=3.5e-18 Score=173.42 Aligned_cols=163 Identities=18% Similarity=0.187 Sum_probs=122.1
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhh-cCCCCCcCCCCCceEEcCCCCCCCcccccccC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL-SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 80 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~-~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~ 80 (444)
|+.+||+|+|||+++.. .| .+|+|.+++++||++.......... ..........++.++|||+..+.+.
T Consensus 268 ~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~------- 337 (447)
T 2dv6_A 268 HITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR------- 337 (447)
T ss_dssp HHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCEECCBBHHHHHTTCCSEEEETTSTTCCCC-------
T ss_pred HHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccccccCChHHhhccCCCEEEECCcccCCCC-------
Confidence 56789999999998753 23 5789999999999986321000000 0000000225678999999875221
Q ss_pred CCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceee--EeeeEEecCCceEEEE
Q 013385 81 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVL 158 (444)
Q Consensus 81 ~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~--~v~~~~i~~GeR~dV~ 158 (444)
...+.+++|++|||||+|++....+.|+|+||+|+||+.||.+++|. ..+++.|++|||++|+
T Consensus 338 ---------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~ 402 (447)
T 2dv6_A 338 ---------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVD 402 (447)
T ss_dssp ---------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEE
T ss_pred ---------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEE
Confidence 12689999999999999999888899999999999999999999654 5899999999999999
Q ss_pred EecCCCCCcceEEEEEecCCCCCCCCeEEEEEEcC
Q 013385 159 LTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 193 (444)
Q Consensus 159 v~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~ 193 (444)
|++++ +|.|+|+....... .....++++|.+
T Consensus 403 ~~~~~--pG~~~~hch~~~h~--~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 403 FKIDR--AGRYILVDHALSRL--EHGLVGFLNVDG 433 (447)
T ss_dssp EECCS--CEEEEEEESSGGGG--GGTCCEEEEECS
T ss_pred EECCC--CEEEEEEecCcCcc--ccCCEEEEEEeC
Confidence 99986 68999988765321 223478899974
No 44
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.75 E-value=3.8e-17 Score=165.47 Aligned_cols=233 Identities=11% Similarity=0.063 Sum_probs=146.1
Q ss_pred eEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|+++.|+++++|++|.... ....++++|+. ..||... ...|.||+++++.+++++ +|+||.+...
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 479999999999999999642 46678888865 3688653 225899999999999976 7999998743
Q ss_pred cCCCCC-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeEE
Q 013385 176 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 254 (444)
Q Consensus 176 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 254 (444)
.....+ .....+.|.+.+... .|.+ +.. +...+.+... ....... ....+............
T Consensus 128 ~~~~~~~~~Gl~G~~iv~~~~~----------~~~~-d~e----~~l~l~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 190 (442)
T 2zoo_A 128 APVGMHIANGMYGLILVEPKEG----------LAPV-DRE----YYLVQGDFYT-KGEFGEA-GLQPFDMAKAIDEDADY 190 (442)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC----------CCCC-SEE----EEEEEEEECB-SSCTTCC-EEECBCHHHHHTTCCSE
T ss_pred CChHHHHhCccEEEEEEeCCCC----------CCCC-Cce----EEEEeeeeec-cCccccc-ccccCChhHhccCCCCE
Confidence 211001 111234444432110 0111 100 0000100000 0000000 00000000000011234
Q ss_pred EEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCC
Q 013385 255 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 334 (444)
Q Consensus 255 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 334 (444)
+.|||..+... ....+.++.|++++|.|.|.+..
T Consensus 191 ~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~~---- 224 (442)
T 2zoo_A 191 VVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGPN---- 224 (442)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEESS----
T ss_pred EEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCCC----
Confidence 67787754210 00127889999999999996532
Q ss_pred CCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccChhh-HhcccEEE
Q 013385 335 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMGVV 413 (444)
Q Consensus 335 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~~H-~~~GM~~~ 413 (444)
..|+||+|||.|.|++...+. ..|.+.|++.|.||+...|.|++++||.|++|||...| ...||+++
T Consensus 225 -~~~~~~i~g~~~~vi~~DG~~-----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~ 292 (442)
T 2zoo_A 225 -LVSSFHVIGEIFDTVYVEGGS-----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292 (442)
T ss_dssp -CCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEE
T ss_pred -CceeeEEcCCEEEEEecCCcc-----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEE
Confidence 189999999999999985332 23688999999999999999999999999999999999 58999998
Q ss_pred Eec
Q 013385 414 LAL 416 (444)
Q Consensus 414 ~~~ 416 (444)
|..
T Consensus 293 l~v 295 (442)
T 2zoo_A 293 LKV 295 (442)
T ss_dssp EEE
T ss_pred EEe
Confidence 854
No 45
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.75 E-value=5.5e-17 Score=158.33 Aligned_cols=90 Identities=27% Similarity=0.316 Sum_probs=73.0
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCC--ccceEEeCCCcEEEEEE
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRF 388 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~v~irf 388 (444)
.+.++.|++++|+..+.+.. .+++++|||.|.|+. +|.+- +|+ +.||+.|.+|+.+.+.|
T Consensus 226 ~l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 226 ALTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp CEEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ceEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEEE
Confidence 38899999999866555543 566667999999996 44432 233 47999999999999999
Q ss_pred EcCCceeeEEeccChhhH-hcccEEEEeccc
Q 013385 389 VADNPGAWAFHCHIEPHF-HIGMGVVLALGV 418 (444)
Q Consensus 389 ~adnpG~w~~HCHi~~H~-~~GM~~~~~~~~ 418 (444)
++++||.|+||||.+.|. +.||+++|.+..
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 999999999999999986 999999996543
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.72 E-value=2e-17 Score=175.10 Aligned_cols=140 Identities=13% Similarity=0.121 Sum_probs=104.1
Q ss_pred ccccceeeeEEEECCCCCCC--CCCC-CcceEEEEe------ecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCC
Q 013385 2 QRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLS------DWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 72 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~--p~~~-D~e~~l~l~------Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c 72 (444)
|+.+||+|+|||+++..... ...+ ++|++|+|+ ||+++............ .+...++.++|||+...
T Consensus 162 q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 162 DIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS--EVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSC--
T ss_pred cccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc--chhhcCceeccCCEecC--
Confidence 78899999999999864211 1223 689999999 89987654321111111 11335788999999752
Q ss_pred cccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcce-eEEEEEcCcceEEEEeCCccceeeEeeeEEecC
Q 013385 73 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYS 151 (444)
Q Consensus 73 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~ 151 (444)
.+.+.+++|++|||||||++... .+.|+++||.|+||+.|| ..++.+.|+|
T Consensus 238 -----------------------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~p 289 (647)
T 1sdd_B 238 -----------------------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLP 289 (647)
T ss_dssp -----------------------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECT
T ss_pred -----------------------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECC
Confidence 12588999999999999999874 799999999999999986 4789999999
Q ss_pred CceEEEEEecCCCCCcceEEEEEe
Q 013385 152 GESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 152 GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
|||+||+|++++ +|.|.++...
T Consensus 290 g~r~~v~~~~~~--pG~w~~hch~ 311 (647)
T 1sdd_B 290 GSFKTLEMKASK--PGWWLLDTEV 311 (647)
T ss_dssp TEEEEEEEECCS--SEEEEEECCC
T ss_pred CeEEEEEEEecc--ceEeecccCc
Confidence 999999999987 5888877664
No 47
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.72 E-value=4.9e-17 Score=155.04 Aligned_cols=129 Identities=15% Similarity=0.207 Sum_probs=105.3
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++++. ..+|+|++|+++||+... . ..++..+|||+... +
T Consensus 141 ~~~~Gl~G~liV~~~~~~---~~~d~e~~l~~~d~~~~~------------g---~~~~~~~iNG~~~~-------~--- 192 (288)
T 3gdc_A 141 HIAKGLYGGFIVEPKEGR---PPADDEMVMVMNGYNTDG------------G---DDNEFYSVNGLPFH-------F--- 192 (288)
T ss_dssp HHHTTCEEEEEEECSSCC---CCCSEEEEEEEEEECCSS------------T---TCCSEEEETTSTTH-------H---
T ss_pred HHhCcCeEEEEEeCCccC---CCCcceEEEEEeeEecCC------------C---CCcceEEECccccc-------c---
Confidence 678999999999998652 356899999999999762 1 14678999999763 0
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcce-eEEEEEcCcceEEEEeCCccc-eeeEeeeEEecCCceEEEEE
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~v-~p~~v~~~~i~~GeR~dV~v 159 (444)
....+.+++|+++||||+|++... .+.|+|+||.|+|++ +|..+ .|...+++.|+||||++|++
T Consensus 193 -------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~ 258 (288)
T 3gdc_A 193 -------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTISQVQGQRGILEL 258 (288)
T ss_dssp -------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEE
T ss_pred -------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEEEeCCCceEEEEE
Confidence 012478999999999999999654 689999999999998 55554 67889999999999999999
Q ss_pred ecCCCCCcceEEEEE
Q 013385 160 TTNQDPSYNYWISAG 174 (444)
Q Consensus 160 ~~~~~~~g~y~i~~~ 174 (444)
++++ +|.|.+...
T Consensus 259 ~~~~--pG~~~~hCH 271 (288)
T 3gdc_A 259 RFPY--PGKFMFHAH 271 (288)
T ss_dssp CCCS--CEEEEEECS
T ss_pred ECCC--CEEEEEEec
Confidence 9986 789888654
No 48
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.66 E-value=3.5e-16 Score=150.87 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=98.1
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++.+ ..+|+|++|+|+||+ +||+...+
T Consensus 133 ~~~~Gl~G~liV~~~~~----~~~d~e~~l~~~d~t--------------------------~Ng~~~~~---------- 172 (313)
T 3tas_A 133 GIRNGLYGPVIVRRKGD----VLPDRTHTIVFNDMT--------------------------INNRPAHT---------- 172 (313)
T ss_dssp HHHHTCEEEEEEECTTC----BCCSEEEEEEEETTE--------------------------ETTCCTTC----------
T ss_pred hhhccccCceEeecccc----ccccccceeeccchh--------------------------cccCCccc----------
Confidence 46789999999999865 457999999999984 46665431
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc---eeeEeeeEEecCCceEEEE
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVL 158 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v---~p~~v~~~~i~~GeR~dV~ 158 (444)
.+.+.++.|++|||||+|++. ..+.|+|+||.|+|++.||... .|..++++.|.||||++|+
T Consensus 173 --------------~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~ 237 (313)
T 3tas_A 173 --------------GPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQ 237 (313)
T ss_dssp --------------CCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEE
T ss_pred --------------ccccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEE
Confidence 125889999999999999995 4679999999999999999876 4778999999999999999
Q ss_pred EecCC-CCCcceEEEEEe
Q 013385 159 LTTNQ-DPSYNYWISAGV 175 (444)
Q Consensus 159 v~~~~-~~~g~y~i~~~~ 175 (444)
|.+.+ +.+|.|.+....
T Consensus 238 v~a~~~~nPG~w~~HCHi 255 (313)
T 3tas_A 238 VIAGEGVGAGAWMYHCHV 255 (313)
T ss_dssp EETTTTTCSEEEEEEECS
T ss_pred EEeccCCCCEeEEEEeCC
Confidence 98875 246888777664
No 49
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.63 E-value=2e-17 Score=159.18 Aligned_cols=128 Identities=10% Similarity=0.126 Sum_probs=86.8
Q ss_pred ccccceeeeEEEECCCC---CCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccc
Q 013385 2 QRSAGLYGSLIVDVADG---EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 78 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~---~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~ 78 (444)
|+++||+|+|||+++.+ ...+..+|+|++|+++||.... +.. ...++.++|||+... .
T Consensus 153 q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~~---~~~~~~~~ING~~~~--~----- 213 (306)
T 1sdd_A 153 DFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SWN---QTSSLMYTVNGYVNG--T----- 213 (306)
T ss_dssp HHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SSS---CCCCEEECSSSCCSS--C-----
T ss_pred hhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------ccc---cCCCcceeeCCEecC--C-----
Confidence 67899999999998753 1234567899999999984221 110 224677999999752 0
Q ss_pred cCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEE
Q 013385 79 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 157 (444)
Q Consensus 79 ~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV 157 (444)
.+.+.+++|++|||||+|++.. ..+.|+++||.|.+ || ..++++.|+||||+||
T Consensus 214 -----------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v 268 (306)
T 1sdd_A 214 -----------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTA 268 (306)
T ss_dssp -----------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC-
T ss_pred -----------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEE
Confidence 1357899999999999999987 56789999999875 88 3589999999999999
Q ss_pred EEecCCCCCcceEEEEEe
Q 013385 158 LLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 158 ~v~~~~~~~g~y~i~~~~ 175 (444)
+|++++ +|.|+++...
T Consensus 269 ~~~~~~--pG~~~~hch~ 284 (306)
T 1sdd_A 269 NMTVSP--EGRWTIASLI 284 (306)
T ss_dssp ---------CCCCCBCCS
T ss_pred EEEcCC--CeEEEEEeCC
Confidence 999986 6888886654
No 50
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.59 E-value=6.3e-15 Score=139.55 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=98.0
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++.+ ...|+|++|+++|| +|||+...
T Consensus 127 ~~~~Gl~G~liV~~~~~----~~~drE~~l~l~~~--------------------------~iNG~~~~----------- 165 (276)
T 3kw8_A 127 GIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM--------------------------TINNRKPH----------- 165 (276)
T ss_dssp HHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------EETTCCTT-----------
T ss_pred hhhCccEEEEEEecCCC----cccccceEEEeccc--------------------------ccceeccc-----------
Confidence 68899999999999865 22489999999875 58999753
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc----eeeEeeeEEecCCceEEE
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDIYSGESYSV 157 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v----~p~~v~~~~i~~GeR~dV 157 (444)
..+.+.++.|+++||||+|.+. ....|+++||.|.|++ ||... .+..++++.|.|||++++
T Consensus 166 -------------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~ 230 (276)
T 3kw8_A 166 -------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGF 230 (276)
T ss_dssp -------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEE
T ss_pred -------------CCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEE
Confidence 1136899999999999999997 4789999999999975 77643 246789999999999999
Q ss_pred EEecCC-CCCcceEEEEEec
Q 013385 158 LLTTNQ-DPSYNYWISAGVR 176 (444)
Q Consensus 158 ~v~~~~-~~~g~y~i~~~~~ 176 (444)
++++++ +.+|.|+++....
T Consensus 231 ~~~~~~~~npG~w~~HCH~~ 250 (276)
T 3kw8_A 231 QIIAGEGVGAGAWMYHCHVQ 250 (276)
T ss_dssp EEETTTTTCSEEEEEEECSH
T ss_pred EEEeccCCCCCeEEEECCCc
Confidence 999985 2478999988753
No 51
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.58 E-value=6.4e-15 Score=140.93 Aligned_cols=119 Identities=14% Similarity=0.189 Sum_probs=97.1
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++.+ ..+|+|++|+++||. +||+...+
T Consensus 149 ~~~~GL~G~liV~~~~~----~~~d~e~~l~~~~~~--------------------------~Ng~~~~~---------- 188 (299)
T 3t9w_A 149 GVLKGLYGALVVRRQGD----LLPKRQFTVVFNDMM--------------------------INNRAHHD---------- 188 (299)
T ss_dssp HHHHTCEEEEEEECTTC----CCCSEEEEEEEETTE--------------------------ETTCCTTC----------
T ss_pred hhcccccceEEEecccc----cCccccceeeeeeee--------------------------ecCccccc----------
Confidence 56789999999998864 457999999998874 67776541
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce---eeEeeeEEecCCceEEEE
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---PFEVDDMDIYSGESYSVL 158 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~---p~~v~~~~i~~GeR~dV~ 158 (444)
.+.+.++.|+++||||||++.. ...|+|+||.|+|+..|+.... +..+|.+.|.||||++++
T Consensus 189 --------------~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~ 253 (299)
T 3t9w_A 189 --------------APTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQ 253 (299)
T ss_dssp --------------CCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEE
T ss_pred --------------cccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEE
Confidence 1368999999999999999965 4699999999999999887763 456899999999999999
Q ss_pred EecCC-CCCcceEEEEEe
Q 013385 159 LTTNQ-DPSYNYWISAGV 175 (444)
Q Consensus 159 v~~~~-~~~g~y~i~~~~ 175 (444)
|.+.+ +.+|.|.+....
T Consensus 254 via~~~dnPG~w~~HCHi 271 (299)
T 3t9w_A 254 VIAGEGVGPGMWMYHCHV 271 (299)
T ss_dssp EETTTTTCSEEEEEEECS
T ss_pred EEEeeCCCCeeEEEEcCC
Confidence 88764 346888887654
No 52
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.53 E-value=4.1e-14 Score=137.86 Aligned_cols=133 Identities=13% Similarity=0.152 Sum_probs=102.7
Q ss_pred ccccceeeeEEEECCCCCCCCCCCCcceEEEEeecCCCCHHHHHhhhcCCCCCcCCCCCceEEcCCCCCCCcccccccCC
Q 013385 2 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 81 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~~p~~~D~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~ 81 (444)
|+.+||+|+|||+++.+ ..+|+|++|+++|| +|||+..+
T Consensus 168 ~~~~Gl~G~~iV~~~~~----~~pd~e~~l~~~d~--------------------------~iNG~~~~----------- 206 (343)
T 3cg8_A 168 GIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM--------------------------TINNRKPH----------- 206 (343)
T ss_dssp HHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------EETTCCTT-----------
T ss_pred hhhcCCeEEEEEecCCC----CCCCceEEEEcccc--------------------------eecccCCC-----------
Confidence 67899999999998865 23689999999886 58998753
Q ss_pred CccccccCCCCCCCceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce----eeEeeeEEecCCceEEE
Q 013385 82 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSV 157 (444)
Q Consensus 82 ~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~----p~~v~~~~i~~GeR~dV 157 (444)
..+.+.++.|++|||||+|.+. ..+.|+|+||.|+|+ .||.+.. +...+++.|.||||++|
T Consensus 207 -------------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v 271 (343)
T 3cg8_A 207 -------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGF 271 (343)
T ss_dssp -------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEE
T ss_pred -------------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEE
Confidence 1136899999999999999996 578999999999997 4776543 35679999999999999
Q ss_pred EEecCC-CCCcceEEEEEecCCCCCCCCeEEEEEEc
Q 013385 158 LLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 192 (444)
Q Consensus 158 ~v~~~~-~~~g~y~i~~~~~~~~~~~~~~~ail~y~ 192 (444)
++++++ +.+|.|++......-. .....+++.+.
T Consensus 272 ~~~~~~~~~pG~w~~HCHi~~H~--~~GM~g~~~V~ 305 (343)
T 3cg8_A 272 QIIAGEGVGAGAWMYHCHVQSHS--DMGMVGLFLVK 305 (343)
T ss_dssp EEETTTTTCSEEEEEEECSHHHH--HTTCEEEEEEE
T ss_pred EEEECCCCCCeeEEEeCCCHHHH--hccCcEEEEEe
Confidence 999853 3578888877643211 12245666665
No 53
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.50 E-value=5.1e-15 Score=158.09 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=100.5
Q ss_pred ccccceeeeEEEECCCCCC---CCCCCCcceEEEEee------cCCCCHHHHHhhhcCCCC-------CcCCCCCceEEc
Q 013385 2 QRSAGLYGSLIVDVADGEK---EPFHYDGEFNLLLSD------WWHRSVHEQEVGLSSRPL-------RWIGEPQTLLIN 65 (444)
Q Consensus 2 Q~~dGL~G~lIV~~~~~~~---~p~~~D~e~~l~l~D------w~~~~~~~~~~~~~~~~~-------~~~~~~d~~liN 65 (444)
|+++||+|+|||+++.... .+..+|+|++|++++ |+++.... .+...+. .+....+..+||
T Consensus 284 q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~IN 360 (770)
T 2r7e_B 284 DVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAIN 360 (770)
T ss_dssp HHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTT
T ss_pred HHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccC
Confidence 6789999999999986421 112357899888743 66653211 1110000 011123457899
Q ss_pred CCCCCCCcccccccCCCccccccCCCCCCCceEEEEcCCCeEEEEEEecCcc-eeEEEEEcCcceEEEEeCCccceeeEe
Q 013385 66 GRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEV 144 (444)
Q Consensus 66 G~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~p~~v 144 (444)
|+... . .+.+.+++|++|||||+|++.. ..+.|+|+||.|+|++.||. .+
T Consensus 361 G~~~~--~----------------------~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~ 411 (770)
T 2r7e_B 361 GYIMD--T----------------------LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KM 411 (770)
T ss_dssp SCTTT--T----------------------CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EE
T ss_pred CccCC--C----------------------CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----ee
Confidence 98642 1 1257899999999999999875 46899999999999999974 78
Q ss_pred eeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 145 DDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 145 ~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
+++.|.||||++|+|++++ +|.|.+....
T Consensus 412 Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~ 440 (770)
T 2r7e_B 412 ALYNLYPGVFETVEMLPSK--AGIWRVECLI 440 (770)
T ss_dssp SEEECCTTCCCEEEECCSS--CBCCCBCCCS
T ss_pred eEEEECCCeEEEEEEEeCC--CCceEEEecc
Confidence 9999999999999999987 6888776554
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.29 E-value=1.9e-11 Score=123.23 Aligned_cols=202 Identities=16% Similarity=0.177 Sum_probs=129.6
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|++++|+++++++.|.... ...++.+|..+.- ..||.++ .|.|||+++..+++.+++.|+||.+....
T Consensus 47 P~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~~-~~DG~~~--------~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~ 116 (439)
T 2xu9_A 47 PTLRVRPRDTVRLTLENRLPE-PTNLHWHGLPISP-KVDDPFL--------EIPPGESWTYEFTVPKELAGTFWYHPHLH 116 (439)
T ss_dssp CEEEECTTCEEEEEEEECSSS-CBCCEEETCCCCT-TTSCTTC--------CBCTTCEEEEEEECCSSCCEEEEEECCCT
T ss_pred CEEEEeCCCEEEEEEEECCCC-CcceEeCCCCCCc-cccCCcc--------cCCCCCeEEEEEecCCCCCcceEeccCCC
Confidence 589999999999999999864 4466666654322 5788652 38999999999998644689999988753
Q ss_pred CCCC-C-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccc------
Q 013385 177 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT------ 248 (444)
Q Consensus 177 ~~~~-~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~------ 248 (444)
.... + .....+.|...+... ..|..+ .++.+.+.+..-.
T Consensus 117 ~~t~~q~~~Gl~G~liV~~~~~------~~~~~~---------------------------~~~e~~l~l~D~~~~~~~~ 163 (439)
T 2xu9_A 117 GRVAPQLFAGLLGALVVESSLD------AIPELR---------------------------EAEEHLLVLKDLALQGGRP 163 (439)
T ss_dssp TSHHHHHHTTCCEEEEECCGGG------GSHHHH---------------------------TSEEEEEEEEEECEETTEE
T ss_pred CchHHHHHhhCeEEEEEcCccc------cCccCC---------------------------CCCcEEEEEEeeeeCCCCc
Confidence 2110 1 011222232221100 000000 0112211111000
Q ss_pred ----------cCCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCC
Q 013385 249 ----------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 318 (444)
Q Consensus 249 ----------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 318 (444)
......+.|||..+ ..+.++.|
T Consensus 164 ~~~~~~~~~~g~~~~~~~iNG~~~-----------------------------------------------p~l~v~~g- 195 (439)
T 2xu9_A 164 APHTPMDWMNGKEGDLVLVNGALR-----------------------------------------------PTLVAQKA- 195 (439)
T ss_dssp CCCCHHHHHHCCCCSEEEETTEES-----------------------------------------------CEEECSSS-
T ss_pred CCCCccccccCCCCCEEEECCccC-----------------------------------------------CcEEecCC-
Confidence 00001233443321 14889999
Q ss_pred EEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEE
Q 013385 319 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 398 (444)
Q Consensus 319 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~ 398 (444)
+++|.|.|.+.. ..|.||+|||.|+|++...+.. ..|...|++.|.+|+.+.|.++++++|.|.+
T Consensus 196 ~~RlRliN~~~~-----~~~~~~i~gh~~~vi~~DG~~~----------~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l 260 (439)
T 2xu9_A 196 TLRLRLLNASNA-----RYYRLALQDHPLYLIAADGGFL----------EEPLEVSELLLAPGERAEVLVRLRKEGRFLL 260 (439)
T ss_dssp EEEEEEEECCSS-----CCEEEEETTBCEEEEEETTEEE----------EEEEEESCEEECTTCEEEEEEECCSSEEEEE
T ss_pred eEEEEEEecCCC-----ceEEEEECCceEEEEecCCCCC----------CCceEeceEEECCceeEEEEEEcCCCceEEE
Confidence 999999998754 2799999999999999853321 2456789999999999999999999999999
Q ss_pred eccChh
Q 013385 399 HCHIEP 404 (444)
Q Consensus 399 HCHi~~ 404 (444)
+|+...
T Consensus 261 ~~~~~~ 266 (439)
T 2xu9_A 261 QALPYD 266 (439)
T ss_dssp EEECCC
T ss_pred Eecccc
Confidence 998543
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.18 E-value=6e-11 Score=95.01 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=65.3
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|+| .|.+.. .|++|+||..+... .|. +.. ....++..|.||+...++|.+
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~------~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLP------PHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEE--EECSSC------CEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEECT
T ss_pred EEEEcCCCEEEE--EECCCC------CCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEec
Confidence 489999999976 477655 89999999876431 000 000 012578899999999999998
Q ss_pred -CCceeeEEeccChhhHhcccEEEEecc
Q 013385 391 -DNPGAWAFHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 391 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 417 (444)
+.||.|.|||| .|...||...|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999988653
No 56
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.16 E-value=4.8e-11 Score=100.75 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=70.0
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEe------ecCC---CCCchhhcccCCCCCCccceEEeCCC
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG------RGEG---KFTKEDEKKFNLKNPPLKNTAVIFPY 381 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~n~~~p~~rDTv~v~~~ 381 (444)
.+.++.|++|+|+|.|.+.+. .|.||+|+....+.. ...+ .+.+. -....++||..|.||
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~-----~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQ-----QHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGN 104 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSC-----CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTT
T ss_pred eEEECCCCEEEEEEEeCCCCC-----CeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCC
Confidence 388999999999999976530 599999986532110 0000 01100 011257899999999
Q ss_pred cEEEEEEEcCCceeeEEeccChhhHhcccEEEEec
Q 013385 382 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 382 g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+...|.|.+++||.|.||||+..|.+ ||+..|.+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999999999 99998865
No 57
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.08 E-value=2.1e-09 Score=111.48 Aligned_cols=248 Identities=9% Similarity=0.080 Sum_probs=134.8
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEE-EeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~vi-a~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|+++.|+++++++.|........|+.+|..+.-- .+||.+- +..-.|.|||++...+++++ .|+||.+...
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~tY~f~~~~--~GT~wYHsH~ 107 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETFFYNFTVDN--PGTFFYHGHL 107 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEECS
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCeEEEEEECCC--CEEEEEEECc
Confidence 489999999999999999874455667766432111 1699763 23445889999999999954 7999999875
Q ss_pred cCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeEEE
Q 013385 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 255 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 255 (444)
.... .....|.|...+.... ..| .+ .+.+ ....+.+... . ........+. .............
T Consensus 108 ~~q~--~~Gl~G~liV~~~~~~-----~~~-~~--~d~e----~~l~l~Dw~~-~-~~~~~~~~~~-~~~~~~~~~~~~~ 170 (552)
T 1aoz_A 108 GMQR--SAGLYGSLIVDPPQGK-----KEP-FH--YDGE----INLLLSDWWH-Q-SIHKQEVGLS-SKPIRWIGEPQTI 170 (552)
T ss_dssp TTTG--GGTCEEEEEEECCTTC-----CCS-SC--CSEE----EEEEEEEECS-S-CHHHHHHHTT-SSSCCCCCSCSEE
T ss_pred hhHH--hccCeeeEEEeCCccc-----CCC-CC--CCcc----ceEEeecccC-C-CHHHHHhhhh-cccccCCCCCCeE
Confidence 3211 1112333332221110 000 00 0100 0000100000 0 0000000000 0000000011235
Q ss_pred EecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCCC
Q 013385 256 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 335 (444)
Q Consensus 256 ~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~ 335 (444)
.|||+.... ........ .. . ..|.. . + ........+.++.|++++|.|.|.+..
T Consensus 171 liNG~~~~~--c~~~~~~~--~~--------~-~~c~~-~--~-----~~~~~~~~~~v~~G~~~RlRliNa~~~----- 224 (552)
T 1aoz_A 171 LLNGRGQFD--CSIAAKYD--SN--------L-EPCKL-K--G-----SESCAPYIFHVSPKKTYRIRIASTTAL----- 224 (552)
T ss_dssp EETTBCCSS--SBTTGGGC--TT--------S-CBCCC-C--S-----CSTTSCCCEEECTTCEEEEEEEECCSS-----
T ss_pred EECCccccC--cccCcccc--cc--------c-ccccc-c--C-----CCCCCceEEEEcCCCEEEEEEEccccc-----
Confidence 788875321 00000000 00 0 00000 0 0 000000148999999999999998754
Q ss_pred CCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC--ceeeEEeccChh
Q 013385 336 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--PGAWAFHCHIEP 404 (444)
Q Consensus 336 ~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn--pG~w~~HCHi~~ 404 (444)
..+-||++||.|+|++.. |.+ ..|...|++.|.+|+.+.|-+++++ +|.|.++|+...
T Consensus 225 ~~~~~~i~gh~~~vi~~D-G~~----------~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~ 284 (552)
T 1aoz_A 225 AALNFAIGNHQLLVVEAD-GNY----------VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA 284 (552)
T ss_dssp CEEEEEETTCCEEEEEET-TEE----------EEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES
T ss_pred ceEEEEEcCcEEEEEEEC-Ccc----------cCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc
Confidence 278999999999999984 322 1367789999999999999999843 899999999764
No 58
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.04 E-value=1.7e-09 Score=109.31 Aligned_cols=205 Identities=11% Similarity=0.070 Sum_probs=127.6
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|++++|+++++++.|.... ...++.+|..+.- +.||.+ .-.|.|||+++..+++++ +.|+||.+....
T Consensus 50 P~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~~-~~DG~~-------~~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 119 (451)
T 2uxt_A 50 PTIRVWKGDDVKLIYSNRLTE-NVSMTVAGLQVPG-PLMGGP-------ARMMSPNADWAPVLPIRQ-NAATLWYHANTP 119 (451)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCEEEETCCCCG-GGSCSG-------GGCBCTTCEECCEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCCC-CccEEECCccCCC-CCCCCC-------cCcCCCCCeEEEEEEcCC-CCcceEEecCCC
Confidence 589999999999999999864 3466666654321 379987 345789999999999987 589999998763
Q ss_pred CCCC-C-CCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccc--cC--
Q 013385 177 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT--IN-- 250 (444)
Q Consensus 177 ~~~~-~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~-- 250 (444)
.... + .....|.|...+.... .. ..|. .-.++.+.+....-. .+
T Consensus 120 ~~t~~q~~~Gl~G~liV~~~~~~---~~---~~p~------------------------~y~~~e~~l~l~D~~~~~~~~ 169 (451)
T 2uxt_A 120 NRTAQQVYNGLAGMWLVEDEVSK---SL---PIPN------------------------HYGVDDFPVIIQDKRLDNFGT 169 (451)
T ss_dssp TTHHHHHHTTCEEEEEEECHHHH---HS---SSCC------------------------CBTTTEEEEEEEEEEECTTSC
T ss_pred CchhhhHhhcceEEEEEecCccc---cc---CCCc------------------------cCCCceEEEEEEeeecCCCCc
Confidence 3210 1 1112233322211000 00 0010 000111111110000 00
Q ss_pred -----------CeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCE
Q 013385 251 -----------GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 319 (444)
Q Consensus 251 -----------~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 319 (444)
....+.|||+.+ ..+.++.| +
T Consensus 170 ~~~~~~~~~~~~~d~~liNG~~~-----------------------------------------------p~~~v~~g-~ 201 (451)
T 2uxt_A 170 PEYNEPGSGGFVGDTLLVNGVQS-----------------------------------------------PYVEVSRG-W 201 (451)
T ss_dssp EECCCCSSSCCCCSEEEETTEES-----------------------------------------------CEEEECSS-E
T ss_pred eecccccCCCCcCCEEEECCccc-----------------------------------------------ceEEecCC-E
Confidence 001234444321 14789999 9
Q ss_pred EEEEEEeCCcCCCCCCCCCceee-cccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEE
Q 013385 320 VDVILQNANAIRPNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 398 (444)
Q Consensus 320 v~~vl~N~~~~~~~~~~~HP~Hl-HG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~ 398 (444)
++|.|.|.+.. ..|.||+ |||.|+|++.. |.+- ..|...|++.|.+|+...|.++++.+|.+.+
T Consensus 202 ~RlRliNa~~~-----~~~~~~i~dg~~~~vi~~D-G~~~---------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l 266 (451)
T 2uxt_A 202 VRLRLLNASNS-----RRYQLQMNDGRPLHVISGD-QGFL---------PAPVSVKQLSLAPGERREILVDMSNGDEVSI 266 (451)
T ss_dssp EEEEEEECCSS-----CCEEEEETTSCCEEEEECS-SSEE---------EEEEEESSEEECTTCEEEEEEECTTCCCEEE
T ss_pred EEEEEEccCCc-----eeEEEEECCCCeEEEEEeC-CCcc---------CCceEeceEEECceeEEEEEEEeCCCCEEEE
Confidence 99999998754 2799999 99999999974 4321 2356789999999999999999988899999
Q ss_pred eccChh
Q 013385 399 HCHIEP 404 (444)
Q Consensus 399 HCHi~~ 404 (444)
+++-..
T Consensus 267 ~~~~~~ 272 (451)
T 2uxt_A 267 TCGEAA 272 (451)
T ss_dssp EC----
T ss_pred EecCcc
Confidence 998654
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.03 E-value=4.2e-09 Score=107.32 Aligned_cols=224 Identities=12% Similarity=0.120 Sum_probs=133.0
Q ss_pred eEEEEcCCCeEEEEEEecCcc----eeEEEEEcCcceEE-EEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEE
Q 013385 97 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i 171 (444)
++|+++.|+++++++.|.... ....|+.+|-.+.- -.+||.+- +..-.|.||+++...+++++ ..|+||.
T Consensus 34 P~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~s~tY~f~~~~-~~GT~wY 108 (499)
T 3pxl_A 34 PLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISPGHSFLYDFQVPD-QAGTFWY 108 (499)
T ss_dssp CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECSS-CCEEEEE
T ss_pred CeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEcCC-CCceeee
Confidence 589999999999999998764 24566666654321 35898752 22336899999999999954 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCC
Q 013385 172 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 251 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 251 (444)
+............+ +++...... + .+......+.... ..+.+..-.... .. . .....
T Consensus 109 HsH~~~q~~~GL~G-~lIV~~~~~----~---~~~~~~~d~~~~~----l~l~Dw~~~~~~-~~---------~-~~p~~ 165 (499)
T 3pxl_A 109 HSHLSTQYCDGLRG-PFVVYDPND----P---HASRYDVDNDDTV----ITLADWYHTAAK-LG---------P-RFPGG 165 (499)
T ss_dssp EECSTTGGGGTCEE-EEEEECTTC----T---TGGGCSBCSGGGE----EEEEEECSSCTT-TS---------C-SSCSS
T ss_pred eccchhHHhcccee-EEEEcCCcc----c---ccccCCCCCceEE----EEEEcccCCccc-cc---------c-CCCCC
Confidence 98863211111222 233333211 0 0000000000000 001000000000 00 0 00001
Q ss_pred eEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCC
Q 013385 252 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 331 (444)
Q Consensus 252 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 331 (444)
.....|||+...... .......+.++.|++++|.|.|.+..
T Consensus 166 ~d~~liNG~~~~~~~--------------------------------------~~~~~~~~~v~~G~~~RlRliNa~~~- 206 (499)
T 3pxl_A 166 ADATLINGKGRAPSD--------------------------------------SVAELSVIKVTKGKRYRFRLVSLSCN- 206 (499)
T ss_dssp CSEEEETTBCCCTTC--------------------------------------TTCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCCCcCCCC--------------------------------------CCCCcceEEEcCCCEEEEEEEecCCC-
Confidence 123567775321100 00001258999999999999997754
Q ss_pred CCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeEEeccC
Q 013385 332 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 402 (444)
Q Consensus 332 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnp-G~w~~HCHi 402 (444)
..+.||++||.|+|++.. |.+ ..|...|++.|.+|++..|-++++.+ |.|.++|..
T Consensus 207 ----~~~~~~i~gh~~~via~D-G~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 207 ----PNHTFSIDGHNLTIIEVD-SVN----------SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp ----CCEEEEETTBCEEEEEET-TEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEEC-Ccc----------cCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 278999999999999984 332 24677899999999999999999875 899898864
No 60
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.00 E-value=4.4e-09 Score=108.17 Aligned_cols=230 Identities=13% Similarity=0.144 Sum_probs=133.4
Q ss_pred eEEEEcCCCeEEEEEEecCcc----eeEEEEEcCcceE-EEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEE
Q 013385 97 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i 171 (444)
++|+++.|+++++++.|.... ....++.+|-.+. --..||.+- +..-.|.|||+++..+++.+ ..|+||.
T Consensus 55 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~~Y~f~~~~-~~GT~wY 129 (521)
T 1v10_A 55 PLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFVYDFVVPG-QAGTYWY 129 (521)
T ss_dssp CCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEEEEEECTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCCCCeEEEEEecCC-CCccEEE
Confidence 489999999999999999862 4456666665431 124788762 22335789999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCC
Q 013385 172 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 251 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 251 (444)
+............+ +++...... + .+. .+ +.. .......+.+..- .. +..+....... ...
T Consensus 130 H~H~~~q~~~Gl~G-~liV~~~~~----~---~~~--~~-~~d-~~e~~l~l~D~~~-~~-----~~~~~~~~~~~-~~~ 190 (521)
T 1v10_A 130 HSHLSTQYCDGLRG-AFVVYDPND----P---HLS--LY-DVD-DASTVITIADWYH-SL-----STVLFPNPNKA-PPA 190 (521)
T ss_dssp EECSTTGGGGTCEE-EEEEECTTC----T---TGG--GC-SBC-SGGGEEEEEEECS-SC-----CC-------CC-CSC
T ss_pred EeccCCchhcCceE-EEEEcCCcc----c---ccc--cC-CCC-CceeEEEEccccc-CC-----HHHHhhccCCC-CCC
Confidence 98763211112222 233333110 0 000 00 000 0000011111000 00 00000000000 000
Q ss_pred eEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCC
Q 013385 252 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 331 (444)
Q Consensus 252 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 331 (444)
.....|||+.+.... + .......+.++.|++++|.|.|.+..
T Consensus 191 ~d~~liNG~~~~~~~-~------------------------------------~~~~~~~~~v~~G~~~RlRliNa~~~- 232 (521)
T 1v10_A 191 PDTTLINGLGRNSAN-P------------------------------------SAGQLAVVSVQSGKRYRFRIVSTSCF- 232 (521)
T ss_dssp CSEEEETTBCCCSSC-G------------------------------------GGSCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CCEEEECCcccCCCC-C------------------------------------CCCCceEEEECCCCEEEEEEEecCCc-
Confidence 124667776431100 0 00001258999999999999998754
Q ss_pred CCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeEEeccCh
Q 013385 332 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 403 (444)
Q Consensus 332 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn-pG~w~~HCHi~ 403 (444)
..|.||++||.|.|++.. |.+ ..|...|++.|.+|+...|.++++. +|.|.++|+..
T Consensus 233 ----~~~~~~i~gh~~~vi~~D-G~~----------~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 233 ----PNYAFSIDGHRMTVIEVD-GVS----------HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp ----CCEEEEETTCCEEEEEET-TEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred ----ccEEEEECCCeEEEEecC-Ccc----------ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 279999999999999985 322 2366789999999999999999986 69999999865
No 61
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.00 E-value=3.9e-09 Score=107.59 Aligned_cols=226 Identities=12% Similarity=0.104 Sum_probs=133.0
Q ss_pred eEEEEcCCCeEEEEEEecCcc----eeEEEEEcCcceEE-EEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEE
Q 013385 97 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i 171 (444)
++|+++.|+++++++.|.... ....++.+|-.+.- -.+||.+- +..-.|.||+++...+++++ ..|+||.
T Consensus 35 P~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f~~~~-~~GT~wY 109 (495)
T 3t6v_A 35 PVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNFNVPG-MAGTYWY 109 (495)
T ss_dssp CEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECTT-CCEEEEE
T ss_pred CeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEeCC-CCceeee
Confidence 589999999999999998764 24466666654321 25899752 22346899999999999955 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCC
Q 013385 172 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 251 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 251 (444)
+............+ +++.+..... .+......+.... ..+.+..-... . .. .. .....
T Consensus 110 HsH~~~q~~~GL~G-~lIV~~~~~~-------~~~~~~~d~~e~~----l~l~Dw~~~~~-~-~~-------~~-~~p~~ 167 (495)
T 3t6v_A 110 HSHLTTQYCDGLRG-PFVVYDPNDP-------DANLYDVDDDTTI----ITLADWYHVLA-K-EM-------GA-GGAIT 167 (495)
T ss_dssp EECSTTGGGGTCEE-EEEEECTTCT-------TGGGCSBCSGGGE----EEEEEECSSCG-G-GS-------CS-SSCCC
T ss_pred eccchhHHhcCceE-EEEEcCcccc-------ccccCCCCCceeE----EEEecccCCch-h-hh-------cc-CCCCC
Confidence 98863211111222 2333332110 0000000000000 00000000000 0 00 00 00000
Q ss_pred eEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCC
Q 013385 252 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 331 (444)
Q Consensus 252 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 331 (444)
.....|||+..... .| .......+.++.|++++|.|.|.+..
T Consensus 168 ~d~~liNG~g~~~~-~~------------------------------------~~~~~~~~~v~~G~~~RlRliN~~~~- 209 (495)
T 3t6v_A 168 ADSTLIDGLGRTHV-NV------------------------------------AAVPLSVITVEVGKRYRMRLVSISCD- 209 (495)
T ss_dssp CSEEEETTBCCBSS-SC------------------------------------CCCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCcCcCCC-Cc------------------------------------ccCCceEEEEcCCCEEEEEEEecCCC-
Confidence 12356777532100 00 00011258999999999999997654
Q ss_pred CCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeEEeccC
Q 013385 332 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 402 (444)
Q Consensus 332 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnp-G~w~~HCHi 402 (444)
..+.||++||.|+|++.. |.+ ..|...|++.|.+|+...|-++++.+ |.|.++|..
T Consensus 210 ----~~~~~~i~gh~~~via~D-G~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 210 ----PNYDFSIDGHDMTIIETD-GVD----------SQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp ----CCEEEEETTCCEEEEEET-TEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEeC-Ccc----------cCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 278999999999999984 332 24677899999999999999999875 999999874
No 62
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.97 E-value=5.1e-09 Score=107.24 Aligned_cols=224 Identities=11% Similarity=0.099 Sum_probs=132.7
Q ss_pred eEEEEcCCCeEEEEEEecCcc----eeEEEEEcCcceE-EEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEE
Q 013385 97 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 171 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i 171 (444)
++|+++.|+++++++.|.... ....++.+|-.+. --..||.+- +..-.|.||++++..+++.+ +.|+||.
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~----vtq~~I~PG~~~~Y~f~~~~-~~GT~wY 108 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADG----VNQCPISPGHAFLYKFTPAG-HAGTFWY 108 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEECCTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcc----cccCCcCCCCeEEEEEEeCC-CCccEEE
Confidence 489999999999999999862 4456666664431 124798762 12335889999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCC
Q 013385 172 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 251 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 251 (444)
+....... .....|.|...+.. . + .+..-...+.. ....+.+..- . ...... . + . .
T Consensus 109 H~H~~~q~--~~Gl~G~liV~~~~-~--~---~~~~~~~d~~e----~~l~l~Dw~~-~-~~~~~~-~--~----~---~ 164 (503)
T 1hfu_A 109 HSHFGTQY--CDGLRGPMVIYDDN-D--P---HAALYDEDDEN----TIITLADWYH-I-PAPSIQ-G--A----A---Q 164 (503)
T ss_dssp EECSTTGG--GGTCEEEEEEECTT-C--T---TGGGCSBCSTT----SEEEEEEECS-S-CGGGCC-------------C
T ss_pred Eecchhhh--hCcceeeEEEcCCC-C--C---cccCCCCCCce----EEEEEccccc-C-ChHHhc-C--C----C---C
Confidence 98863211 11223333322110 0 0 00000000000 0000100000 0 000000 0 0 0 0
Q ss_pred eEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCC
Q 013385 252 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 331 (444)
Q Consensus 252 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 331 (444)
.....|||+....- .+ ......+.++.|++++|.|.|.+..
T Consensus 165 ~d~~liNG~~~~~~-~~-------------------------------------~~~~~~~~v~~g~~~RlRliN~~~~- 205 (503)
T 1hfu_A 165 PDATLINGKGRYVG-GP-------------------------------------AAELSIVNVEQGKKYRMRLISLSCD- 205 (503)
T ss_dssp CSEEEETTBCCBTT-CC-------------------------------------CCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CCEEEECcccccCC-CC-------------------------------------CCcceEEEEcCCCEEEEEEEecCCc-
Confidence 12466777643110 00 0001258999999999999998754
Q ss_pred CCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeEEeccCh
Q 013385 332 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 403 (444)
Q Consensus 332 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn-pG~w~~HCHi~ 403 (444)
..|.||++||.|+|++.. |.+ ..|...|++.|.+|+...|.++++. +|.|.++++..
T Consensus 206 ----~~~~~~i~gh~~~vi~~D-G~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 206 ----PNWQFSIDGHELTIIEVD-GEL----------TEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp ----CCEEEEETTCCEEEEEET-TEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred ----ccEEEEEcCceEEEEecc-Ccc----------ccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 279999999999999984 322 2367789999999999999999986 69999999854
No 63
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.94 E-value=2.5e-08 Score=103.07 Aligned_cols=232 Identities=10% Similarity=0.001 Sum_probs=133.4
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceE-EEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|+++.|+++++++.|........|+.+|-.+. --.+||.+- +..-.|.||+.|..-+++++ .|+||.+...
T Consensus 98 P~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~sftY~f~~~q--~GT~WYHsH~ 171 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDTLTYKFQVTQ--YGTTWYHSHF 171 (580)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCC--CEEEEEEECS
T ss_pred ceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCeEEEEEECCC--CcceEEeecc
Confidence 5899999999999999997644455666665432 136899863 23345899999999999976 6999999886
Q ss_pred cCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeEEE
Q 013385 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 255 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 255 (444)
.........+ +++.+.+.. ..+ |.... ...+.+..- . ....... .............
T Consensus 172 ~~q~~~GL~G-~lIV~~p~~------------~~y-D~d~~---~l~l~Dw~~-~-~~~~~~~----~~~~~~~~~~d~~ 228 (580)
T 3sqr_A 172 SLQYGDGLFG-PLIINGPAT------------ADY-DEDVG---VIFLQDWAH-E-SVFEIWD----TARLGAPPALENT 228 (580)
T ss_dssp TTGGGGTCEE-EEEEECCCS------------SCC-SEEEE---EEEEEEECS-S-CHHHHHH----HHTTSCCCCBSEE
T ss_pred cccccCcCEE-EEEeeCccc------------CCC-Cccce---EEEEEEEec-C-CHHHHHH----HHhccCCCCCceE
Confidence 3211112222 233332110 000 10000 000000000 0 0000000 0000000001235
Q ss_pred EecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCCC
Q 013385 256 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 335 (444)
Q Consensus 256 ~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~ 335 (444)
.|||+....-. + .. + .+.........+.++.|++++|.|.|.+..
T Consensus 229 liNG~~~~~c~-~---------------~~-------~-------~~~~~~~~~~~~~v~~G~~yRlRlINa~~~----- 273 (580)
T 3sqr_A 229 LMNGTNTFDCS-A---------------ST-------D-------PNCVGGGKKFELTFVEGTKYRLRLINVGID----- 273 (580)
T ss_dssp EETTBCCCCCT-T---------------CC-------C-------TTBCCCCCCCEEECCTTCEEEEEEEECCSS-----
T ss_pred EECCcccCCCc-c---------------cc-------c-------cccccCCCceeEEEcCCCEEEEEEEeccCC-----
Confidence 67776431100 0 00 0 000001112358999999999999998765
Q ss_pred CCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeEEeccCh
Q 013385 336 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 403 (444)
Q Consensus 336 ~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn-pG~w~~HCHi~ 403 (444)
..+-||++||.|.|++.. |.+ ..|...|++.|.+|++..|.++++. +|.|.++-...
T Consensus 274 ~~~~~~i~gh~~~VIa~D-G~~----------v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~ 331 (580)
T 3sqr_A 274 SHFEFAIDNHTLTVIAND-LVP----------IVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWG 331 (580)
T ss_dssp CCEEEEETTCCEEEEEET-TEE----------EEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCC
T ss_pred ceeeEEeCCceEEEEEeC-Ccc----------CCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecc
Confidence 278999999999999984 432 2467789999999999999999986 68888876554
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.93 E-value=1.5e-08 Score=105.04 Aligned_cols=223 Identities=11% Similarity=0.012 Sum_probs=129.9
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceE-EEEeCCccceeeEeeeEEecC-CceEEEEEecCCCCCcceEEEEE
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYS-GESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~p~~v~~~~i~~-GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
++|+++.|+++++++.|........|+.+|..+. --..||.+- +..-.|.| |++++..+++++ .|+||.+..
T Consensus 67 P~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----~tq~~I~P~G~~~~Y~f~~~q--~GT~wYH~H 140 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANG----VTECPIPPKGGQRTYRWRARQ--YGTSWYHSH 140 (559)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTTEEEEEEEECCS--CEEEEEEEC
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCc----cccCccCCCCCeEEEEEECCC--CEEEEEEEc
Confidence 5899999999999999998544456666665431 124699872 22335789 999999999986 799999987
Q ss_pred ecCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCeEE
Q 013385 175 VRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 254 (444)
Q Consensus 175 ~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 254 (444)
......... .|.|...+... ..+ +... ....+.+..- .. . ..+..............
T Consensus 141 ~~~q~~~Gl--~G~liV~~~~~-----------~~~-d~d~---~~l~l~Dw~~-~~-~----~~~~~~~~~~~~~~~d~ 197 (559)
T 2q9o_A 141 FSAQYGNGV--VGTIQINGPAS-----------LPY-DIDL---GVFPITDYYY-RA-A----DDLVHFTQNNAPPFSDN 197 (559)
T ss_dssp STTGGGGTC--EEEEEEECCCS-----------SCC-SEEE---EEEEEEEECS-SC-H----HHHHHHHTTSCCCCBSE
T ss_pred ccchhcCCc--eEEEEecCCCc-----------CCC-cccc---eEEEEecccc-CC-H----HHHhhhhhcCCCCccce
Confidence 632111122 33332221100 000 0000 0000000000 00 0 00000000000000123
Q ss_pred EEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCCCC
Q 013385 255 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 334 (444)
Q Consensus 255 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 334 (444)
..|||+.... .. .......+.++.|++++|.|.|.+..
T Consensus 198 ~liNG~~~~~-~~-------------------------------------~~g~~~~~~v~~g~~~RlRliNa~~~---- 235 (559)
T 2q9o_A 198 VLINGTAVNP-NT-------------------------------------GEGQYANVTLTPGKRHRLRILNTSTE---- 235 (559)
T ss_dssp EEETTBCBCT-TT-------------------------------------CCBCCCEEEECTTCEEEEEEEECCSS----
T ss_pred eEECCccccC-cC-------------------------------------CCCCceEEEEcCCCEEEEEEEecCCC----
Confidence 5677765321 00 00001248899999999999998754
Q ss_pred CCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeEEeccC
Q 013385 335 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHI 402 (444)
Q Consensus 335 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn-pG~w~~HCHi 402 (444)
..|-||++||.|+|++.. |.+ ..|...|++.|.+|+.+.|-++++. +|.|.++...
T Consensus 236 -~~~~~~i~gh~~~vi~~D-G~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 236 -NHFQVSLVNHTMTVIAAD-MVP----------VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp -CCEEEEETTBCEEEEEET-TEE----------EEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred -ceEEEEECCCceEEEecC-Ccc----------cCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 278999999999999985 322 1366789999999999999999876 6777666654
No 65
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.90 E-value=3.8e-09 Score=84.53 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=63.2
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|+ |.+.. .|.+|+|+..+.. . .|. +... ...|++.+.+|+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~-~--~g~----~~~~------~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA-K--SAD----LAKS------LSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CCCBEECSSSSTT-C--CHH----HHHH------HCBCSCCCSTTCEEEEECCT
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEEeCCCCcc-c--ccc----cchh------ccccceeeCCCCEEEEEEec
Confidence 4889999999886 76655 8999999875421 0 010 0000 11477889999999999988
Q ss_pred -CCceeeEEeccChhhHhcccEEEEecc
Q 013385 391 -DNPGAWAFHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 391 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 417 (444)
+.||.|.|||| .|.+.||...|.+.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999998653
No 66
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.84 E-value=5.2e-09 Score=88.26 Aligned_cols=96 Identities=22% Similarity=0.297 Sum_probs=70.1
Q ss_pred EEEccCCCEEEEEEEe--CCcCCCCCCCCCceeeccc--ceEEEe-ec--CC---CCCchhhcccCCCCCCccceEEeCC
Q 013385 311 VYMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGH--DFWVLG-RG--EG---KFTKEDEKKFNLKNPPLKNTAVIFP 380 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N--~~~~~~~~~~~HP~HlHG~--~F~Vl~-~g--~g---~~~~~~~~~~n~~~p~~rDTv~v~~ 380 (444)
.+.++.|++|.|++.| .+.+ .|.||++.. .+.-+. .+ .+ .|-+. . + ....+++|..|.+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~t~~l~p 102 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-P---D-TPNALAWTAMLNA 102 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-T---T-CTTEEEECCCBCT
T ss_pred eEEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCc-c---c-cccccccceeeCC
Confidence 3899999999999999 5555 899999853 221100 00 00 00000 0 0 0125688999999
Q ss_pred CcEEEEEEEcCCceeeEEeccChhhHhcccEEEEecc
Q 013385 381 YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 417 (444)
Q Consensus 381 ~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 417 (444)
|....+.|.++.||.|.|||++..|...||...|.+.
T Consensus 103 G~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 103 GESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999998764
No 67
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.80 E-value=5.5e-08 Score=100.18 Aligned_cols=201 Identities=12% Similarity=0.092 Sum_probs=127.3
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEE-EEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
++|+++.|+++++++.|.-......|+.+|..+.. -.+||.+- +..-.|.||++++..+++++ ..|+||.+...
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----vtq~pI~PG~~~~Y~f~~~~-~~GT~wYH~H~ 108 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPF----LTQCPIAPGSTMLYNFTVDY-NVGTYWYHSHT 108 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECSS-CCEEEEEECCS
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCc----cccCCcCCCCeEEEEEEeCc-cceeEEEEEcC
Confidence 48999999999999999987445566666654321 25799762 12335889999999999985 48999998875
Q ss_pred cCCCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccC-----
Q 013385 176 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN----- 250 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----- 250 (444)
.... .....|.|...+.. . |. . .++.+.+....-...
T Consensus 109 ~~q~--~~Gl~G~liV~~~~------~--p~--~--------------------------~d~e~~l~l~Dw~~~~~~~~ 150 (534)
T 1zpu_A 109 DGQY--EDGMKGLFIIKDDS------F--PY--D--------------------------YDEELSLSLSEWYHDLVTDL 150 (534)
T ss_dssp SSGG--GGTCEEEEEEECTT------C--CS--C--------------------------CSEEEEEEEEEECSSCHHHH
T ss_pred cccc--cCcceeeEEeCCCC------C--CC--C--------------------------CcceEEEEeeccccCCHHHH
Confidence 3211 11122333222110 0 00 0 011111111000000
Q ss_pred ---------------CeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEcc
Q 013385 251 ---------------GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLG 315 (444)
Q Consensus 251 ---------------~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (444)
-.....|||.. ...+.++
T Consensus 151 ~~~~~~~~~~~g~~~~~d~~liNG~~-----------------------------------------------~~~~~v~ 183 (534)
T 1zpu_A 151 TKSFMSVYNPTGAEPIPQNLIVNNTM-----------------------------------------------NLTWEVQ 183 (534)
T ss_dssp HHHHSSTTCTTCCCCCCSEEEETTBS-----------------------------------------------SCEEECC
T ss_pred HHHHhccccCCCCCCCCceEEECCCC-----------------------------------------------ceEEEEE
Confidence 00122333321 1248899
Q ss_pred CCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCC--c
Q 013385 316 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--P 393 (444)
Q Consensus 316 ~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adn--p 393 (444)
.|++++|.|.|.+.. ..+-||++||.|.|++...+ + ..|...|++.|.+|++..|.++++. .
T Consensus 184 ~g~~~RlRliNa~~~-----~~~~~~i~gh~~~vi~~DG~-~----------~~P~~~~~l~l~~gqR~dvlv~~~~~~~ 247 (534)
T 1zpu_A 184 PDTTYLLRIVNVGGF-----VSQYFWIEDHEMTVVEIDGI-T----------TEKNVTDMLYITVAQRYTVLVHTKNDTD 247 (534)
T ss_dssp SSCEEEEEEEECCSS-----CCEEEEETTBCEEEEEETTE-E----------EEEEEESCEEECTTCEEEEEEECCSCSS
T ss_pred CCCEEEEEEEeccCC-----ceEEEEEcCCeeEEEeccCc-C----------ccccEeceEEECccceEEEEEEcCCCCC
Confidence 999999999998754 27899999999999998432 2 1356789999999999999999875 3
Q ss_pred eeeEEeccCh
Q 013385 394 GAWAFHCHIE 403 (444)
Q Consensus 394 G~w~~HCHi~ 403 (444)
|.+.++....
T Consensus 248 ~~y~i~~~~~ 257 (534)
T 1zpu_A 248 KNFAIMQKFD 257 (534)
T ss_dssp CCEEEEEEEC
T ss_pred CcEEEEEecc
Confidence 6666776543
No 68
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.73 E-value=1.2e-07 Score=96.05 Aligned_cols=213 Identities=15% Similarity=0.117 Sum_probs=129.8
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|+++.|+++++++.|.-.. ...|+.+|-... -+.||.+ .-.|.|||+++..+++++.+.|+||.+....
T Consensus 82 PtIr~~~Gd~v~v~v~N~l~~-~tsiHwHGl~~~-~~~DG~p-------q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~ 152 (481)
T 3zx1_A 82 PKIEVFEGDKLEILVKNKLKE-ATTIHWHGVPVP-PDQDGSP-------HDPILAGEERIYRFEIPQDSAGTYWYHPHPH 152 (481)
T ss_dssp CBEEEETTCEEEEEEEECSSS-CBCCEEETCCCC-GGGSCCT-------TSCBCTTCEEEEEEECCTTCCEEEEEECCCT
T ss_pred ceEEEECCcEEEEEEEeCCCC-CeeEEecCcccC-CccCCCc-------cCcCCCCCeEEEEEeCCCCCCceEEEeecCC
Confidence 589999999999999999754 346666665432 2578875 2467999999999999875579999988753
Q ss_pred CCCC----CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEEEecccccCCe
Q 013385 177 GRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 252 (444)
Q Consensus 177 ~~~~----~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 252 (444)
.... ....+.-|++ ..... .. ..|. ......+..+. ... ...+... ........ .
T Consensus 153 ~~t~~q~~~GL~G~lIV~-~~~~~----~~---~~~~----~~l~l~D~~~~-~~g-~~~~~~~------~~~~~g~~-g 211 (481)
T 3zx1_A 153 YTASKQVFMGLAGAFVIK-AKKDA----LS---HLKE----KDLMISDLRLD-ENA-QIPNNNL------NDWLNGRE-G 211 (481)
T ss_dssp TTHHHHHHTTCCEEEEEE-CSSCT----TT---TSEE----EEEEEEEECCB-TTS-CCCCCCH------HHHHHCCC-C
T ss_pred CcchhhhhccceEEEEEc-Ccccc----cc---CCCc----eeEEEEEEecc-CCC-ccccccc------hhhccCCc-C
Confidence 2111 1233333332 21100 00 0000 00000000000 000 0000000 00000000 1
Q ss_pred EEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCcCCC
Q 013385 253 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 332 (444)
Q Consensus 253 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 332 (444)
....|||..+ ..+.++.|+ +|.|.|.+..
T Consensus 212 d~~lvNG~~~-----------------------------------------------p~l~v~~g~--RlRliNa~~~-- 240 (481)
T 3zx1_A 212 EFVLINGQFK-----------------------------------------------PKIKLATNE--RIRIYNATAA-- 240 (481)
T ss_dssp SEEEETTEES-----------------------------------------------CEEEEETTE--EEEEEECCSS--
T ss_pred CEEEECCccC-----------------------------------------------ceEEecCCC--EEEEEecCCC--
Confidence 2345555432 137889998 9999998754
Q ss_pred CCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEeccCh
Q 013385 333 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIE 403 (444)
Q Consensus 333 ~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCHi~ 403 (444)
..+-||++||.|+||+...|.. ..|...|++.|.+|+.+.|-++++.+|.|.+-++..
T Consensus 241 ---~~~~l~i~g~~~~vIa~DGg~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~ 298 (481)
T 3zx1_A 241 ---RYLNLRIQGAKFILVGTDGGLI----------EKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYY 298 (481)
T ss_dssp ---CCEEEEETTCEEEEEEETTEEE----------EEEEEESSEEECTTCEEEEEEECSSCEEEEEEECCC
T ss_pred ---eEEEEEECCCceEEEEcCCCcc----------CCceEeCeEEECCccEEEEEEEcCCCcEEEEEEecc
Confidence 2799999999999999854432 245677999999999999999999999999988643
No 69
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=1.8e-08 Score=79.38 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=59.3
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|+ |.+.. .|.+|+|+..+- +. +... ...|++.+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 4899999999887 66655 899999875321 10 0000 115788999999888877
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||| .|.+.||...|.+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 78999999999 7999999998865
No 70
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.63 E-value=1.1e-07 Score=74.81 Aligned_cols=79 Identities=14% Similarity=0.215 Sum_probs=59.9
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|+| .|.+.. .|.+|+|+..+- ..++.. ..++|++.+.+|+...+.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~p------~~~~~~---------~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGF------PHNIVFDEDAIP------SGVNAD---------AISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECSSC------CEEEEECGGGSC------TTCCHH---------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCC------Cccccc---------cccccceecCCCCEEEEEe--
Confidence 488999999987 577655 899999985320 111100 0246889999999888876
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||| .|.+.||...|.+
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 48999999999 7999999998865
No 71
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.61 E-value=2e-07 Score=93.96 Aligned_cols=210 Identities=10% Similarity=0.055 Sum_probs=124.2
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|++++|+++++++.|.-.. ...++.+|..+. -+.||.+- -.|.||++++..+++++ ..|+||.+....
T Consensus 38 P~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~-~~~DG~~~-------~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 107 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKLTE-PTIVHWHGFDVN-WHNDAHPS-------FAITPGESYNYSFDVVN-RAGTYLYHPHPH 107 (448)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCEEEETCCCC-HHHHTCGG-------GCBCTTCEEEEEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCCC-ceeEEeCCccCC-CccCCCCC-------ccCCCCCEEEEEEEcCC-CCCceEeccCCC
Confidence 589999999999999999764 346677665432 24788775 44789999999999986 589999998843
Q ss_pred CCCC----CCCCeEEEEEEcCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCccceEEEE-Ee-ccccc-
Q 013385 177 GRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL-LN-TQNTI- 249 (444)
Q Consensus 177 ~~~~----~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~-~~~~~- 249 (444)
.... ....+.-|++ ..... . ..+. +. ......+.+..- .. ..+.. .. .....
T Consensus 108 ~~~~~q~~~Gl~G~liV~-~~~~~-------~-~l~~--d~---~e~~l~l~D~~~-~~------~~~~~~~~~~~~~~~ 166 (448)
T 3aw5_A 108 GLTAKQFYMGQLGLVIVE-DSGSD-------L-GFKY--GV---NDLPLVISDRRF-IG------GAPVYNPTPMEMIAG 166 (448)
T ss_dssp TTHHHHHHTTCCEEEEEE-CTTTT-------T-TCCB--TT---TEEEEEEEEEEE-ET------TEEECCCCHHHHHHC
T ss_pred CchHHHHhccceEEEEEe-CCccc-------c-CCCC--CC---ceEEEEEEeecc-CC------CcccccccccccccC
Confidence 2111 1233333333 21100 0 0010 00 000000000000 00 00000 00 00000
Q ss_pred CCeEEEEecCccccCCCCCccccccccCCccCCCCCCCCCCCCCccccCCCCCCCccccceEEEccCCCEEEEEEEeCCc
Q 013385 250 NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA 329 (444)
Q Consensus 250 ~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~ 329 (444)
.....+.|||+.+ ..+.++.| +++|.|.|.+.
T Consensus 167 ~~~~~~liNG~~~-----------------------------------------------p~~~v~~g-~~RlRliNa~~ 198 (448)
T 3aw5_A 167 FLGNAVLVNGVKD-----------------------------------------------AVFKLSGG-SYRLRLVNGSN 198 (448)
T ss_dssp CCCSEEEETTEET-----------------------------------------------CEEEEEEE-EEEEEEEECSS
T ss_pred ccccEEEECCccc-----------------------------------------------ceEEECCC-eEEEEEEcCCC
Confidence 0012344555432 13788999 99999999875
Q ss_pred CCCCCCCCCceee--cc---cceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcCCceeeEEecc
Q 013385 330 IRPNLSEIHPWHL--HG---HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 401 (444)
Q Consensus 330 ~~~~~~~~HP~Hl--HG---~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~adnpG~w~~HCH 401 (444)
. ..+-||+ +| |.|+|++...+ +- ..|...|++.|.+|+.+.|-++++ .|.|.+..+
T Consensus 199 ~-----~~~~~~i~~~~~~~~~~~via~DG~-~~---------~~P~~~~~l~l~pgeR~dvlv~~~-~~~y~l~~~ 259 (448)
T 3aw5_A 199 A-----RLYMLSIVKKNGDVVPMRLIAVDQG-FL---------ARPIEVRALFLAPAERAEVVVELG-EGVYLLKNT 259 (448)
T ss_dssp S-----CCEEEEEEETTSCEECEEEEEETTE-EE---------EEEEEESCEEECTTCEEEEEEEEC-SEEEEEEEC
T ss_pred c-----ceEEEEEEcCCCCCccEEEEEeCCC-cc---------CCceEeceEEECCcceEEEEEECC-CCceEEEcc
Confidence 4 2799999 99 99999998433 21 125668999999999999988887 577555554
No 72
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.56 E-value=1.9e-07 Score=72.25 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=56.6
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|.|+ |.+.. .|.+|+|+.. +...++..+.+|+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLA------PHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--
Confidence 4889999999886 66545 8999998721 0124778889999887776
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||| .|...||...+.+
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 88999999999 8999999988865
No 73
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.55 E-value=5.7e-08 Score=76.27 Aligned_cols=77 Identities=18% Similarity=0.273 Sum_probs=58.7
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|+ |.+.. .|.+++++..+. .+ .. ....++..+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf-- 72 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL-- 72 (97)
T ss_dssp EEEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--
Confidence 3899999998886 66655 899999876551 11 00 0114677888998888876
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||+ .|.+.||...+.+
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 89999999999 8999999998865
No 74
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.43 E-value=5.8e-07 Score=70.66 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=59.2
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.| .|.+.+ .|.+|+|+..|. .| ++.. .. ...+|++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p-----~g-~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGF------PHNDLFDKKEVP-----AG-VDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECCCC------cceEEEeCCCCc-----cc-cccc-cc------cccccceeeCCCCEEEEEe--
Confidence 488999999887 577655 899999986541 11 1100 00 0125677889999888877
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||+ .|.+.||...|.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 48999999999 8999999998865
No 75
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.40 E-value=1.2e-06 Score=70.68 Aligned_cols=72 Identities=19% Similarity=0.337 Sum_probs=56.2
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|+|++.|.+.. .|-|++... .-+..+.||+...+.|.+
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~------~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPI------SEGFSIDAF---------------------------GVQEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECSSS------CEEEEEGGG---------------------------TEEEEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEECCCC------eEEEEEcCC---------------------------CceeEeCCCCEEEEEEEC
Confidence 48999999999999998754 454444321 125678999999999999
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.||||+..|... |...+.+
T Consensus 86 ~~~G~y~~~C~~~~~~~~-M~g~i~V 110 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIH-LPGTLNV 110 (112)
T ss_dssp CSCEEEEEBCSSSCTTTB-CCEEEEE
T ss_pred CCCEEEEEECCCCCchHH-CEEEEEE
Confidence 999999999999877544 8777754
No 76
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.35 E-value=3.3e-06 Score=86.83 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=54.4
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEec
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 176 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~ 176 (444)
++|+++.|+++++++.|..... ..++.+|....- ..||.+-. .|.||++++..+.+++ .+|+||.+....
T Consensus 69 PtI~~~~Gd~v~v~v~N~l~~~-tsiHwHGl~~~~-~~DG~~~~-------~i~PG~~~~Y~f~~~~-~~GT~WYH~H~~ 138 (534)
T 3abg_A 69 PTFQVPRGVETVVRFINNAEAP-NSVHLHGSFSRA-AFDGWAED-------ITEPGSFKDYYYPNRQ-SARTLWYHDHAM 138 (534)
T ss_dssp EEEEEETTCCEEEEEEECSSSC-BCEEEETCCCCT-TTTTCSSS-------CBSSCSCCCEEECCCS-SSCEEEEEECCT
T ss_pred ceEEEeCCcEEEEEEEECCCCC-ceEEECCCcCCC-CCCCCCCC-------CCCCCCeEEEEEecCC-cceeEEEecCcc
Confidence 6899999999999999998653 466666653221 47896422 3789999999999887 578999998864
No 77
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.30 E-value=3.4e-06 Score=66.43 Aligned_cols=71 Identities=15% Similarity=0.282 Sum_probs=57.5
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|.|++.|.+.. .|-|.+.+..+ ...+.+|....+.|++
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKS------EHTFTIKKLGI---------------------------DVVVESGKEKNITVKP 75 (100)
T ss_dssp EEEECTTSCEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEECC
T ss_pred EEEECCCCEEEEEEEcCCCc------eEEEEEecCCc---------------------------ceeecCCcceeEEEec
Confidence 38999999999999998765 67666544322 2346778889999999
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|+|. .|...||...+.+
T Consensus 76 ~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 76 KSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCceEEEECc--cccCCCCEEEEEE
Confidence 99999999997 5999999988764
No 78
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.30 E-value=1.2e-06 Score=69.24 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=57.6
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCc--hhhcccCCCCCCc-cceEEeCCCcEEEEE
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--EDEKKFNLKNPPL-KNTAVIFPYGWTALR 387 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~--~~~~~~n~~~p~~-rDTv~v~~~g~v~ir 387 (444)
.+.++.|++|.|+ |.+.. .|.++++.-. + ++. +.... .+.+ .+++.+.+|+...+.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~------~H~~~~~~~~--------~-~~~~~~~~~~----~~~~~~~~~~~~pG~~~~~t 76 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGET------GHNIVFDIPA--------G-APGTVASELK----AASMDENDLLSEDEPSFKAK 76 (102)
T ss_dssp EEEECTTCCEEEE--ECSSS------CBCCEECCCT--------T-CCHHHHHHHH----HTSCCTTCCBBTTBCEEEEC
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCcc--------c-ccccccchhh----cccccccceecCCCCEEEEE
Confidence 4899999999876 76655 8999987311 1 110 00000 0123 467788999988876
Q ss_pred EEcCCceeeEEeccChhhHhcccEEEEec
Q 013385 388 FVADNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 388 f~adnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
| +.||.|.|||+ .|.+.||...|.+
T Consensus 77 f--~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 77 V--STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp C--CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred e--CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 6 89999999999 9999999998865
No 79
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.17 E-value=1.1e-05 Score=82.67 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=56.3
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeeccc-ceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEE
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH-DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~-~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ 389 (444)
.+.++.+ +++|.|.|.+.. ..+-||++|| .|+|++.. |.+- ..|...|++.|.+|+.+.|-+.
T Consensus 242 ~~~v~~~-~~RlRliNa~~~-----~~~~~~i~~~~~~~via~D-G~~~---------~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 242 YLEVEPR-KYRFRVINASNT-----RTYNLSLDNGGDFIQIGSD-GGLL---------PRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp EEECCSS-EEEEEEEECCSS-----CCEEEEETTCCCEEEEEET-TEEE---------EEEEEESEEEECTTCEEEEEEE
T ss_pred eEEecCC-EEEEEEEccCCc-----ceEEEEECCCCeEEEEccC-CCcc---------cCceEeCeEEECCeeeEEEEEE
Confidence 3667764 899999998754 2789999999 99999984 3221 1356679999999999999999
Q ss_pred cCC-ceeeEE
Q 013385 390 ADN-PGAWAF 398 (444)
Q Consensus 390 adn-pG~w~~ 398 (444)
++. +|.|+.
T Consensus 306 ~~~~~g~~~~ 315 (513)
T 2wsd_A 306 FTAYEGESII 315 (513)
T ss_dssp CGGGTTCEEE
T ss_pred CCCCCCcEEE
Confidence 876 687654
No 80
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.09 E-value=5.4e-06 Score=65.06 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=57.8
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.| .|.+.. .|.++++...+- . + .+... . ...++.+.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p---~--~-~~~~~-~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGF------PHNIVFDEDSIP---S--G-VDASK-I------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECSSC------CBCCEECTTSSC---T--T-CCHHH-H------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCc---c--c-ccccc-c------ccccCccccCCCCEEEEEE--
Confidence 489999999987 676655 899999875431 0 1 11000 0 0124557788999887766
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|||+ .|...||...+.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 58999999999 7999999998865
No 81
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.02 E-value=1.5e-05 Score=80.67 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=64.1
Q ss_pred EEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCcccee---eEeeeEEecCCceEEEEEecCCC--CCcceEEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQD--PSYNYWIS 172 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p---~~v~~~~i~~GeR~dV~v~~~~~--~~g~y~i~ 172 (444)
.+.++.|+++||+|+|.+....+.|+|+||.|+|++.||..+.+ ..-|++.|. ||+..|+++++.. .+|.|-++
T Consensus 393 ~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~H 471 (488)
T 3od3_A 393 MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAH 471 (488)
T ss_dssp SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEE
T ss_pred ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEe
Confidence 47899999999999999866678999999999999999998754 357999999 9999999999863 23667665
Q ss_pred EE
Q 013385 173 AG 174 (444)
Q Consensus 173 ~~ 174 (444)
..
T Consensus 472 CH 473 (488)
T 3od3_A 472 CH 473 (488)
T ss_dssp ES
T ss_pred CC
Confidence 54
No 82
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.02 E-value=1.7e-05 Score=67.48 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=58.3
Q ss_pred EEEccCCCEEEEEEEeCC-cCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccce-------EEeCCCc
Q 013385 311 VYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNT-------AVIFPYG 382 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDT-------v~v~~~g 382 (444)
.+.++.|+.|.+++.|.+ .+ .|-+-++-. +. .+.. -|...+. ..|.||+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~-------~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKK-------GP-PYAV---------MPVIDPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESC-------CS-CCCS---------SCCCCSEEEEBCCCCCCBTTB
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeec-------Cc-chhc---------cccccccccccccccccCCCC
Confidence 489999999999999973 33 555555421 11 1100 0011111 2567888
Q ss_pred --EEEEEEEcCCceeeEEeccChhhHhcccEEEEec
Q 013385 383 --WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 383 --~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
...+.|++ .||.+.||||+.-|...||-..|.+
T Consensus 119 sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 119 FGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 89999999 9999999999999999999988764
No 83
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.83 E-value=5.7e-05 Score=59.84 Aligned_cols=71 Identities=23% Similarity=0.290 Sum_probs=50.2
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|+|+ |.+.. .|-+|+|... .|. +.+ ++-.+.+|+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--
Confidence 4899999999885 76655 8999988521 111 011 122367888776666
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.+.|||++ |. ||...|.+
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 799999999998 65 89887754
No 84
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.80 E-value=5.9e-05 Score=77.52 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=60.1
Q ss_pred eEEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEE
Q 013385 310 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 310 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ 389 (444)
..+.++.|+.|+|++.|.... ....|-|+++++.+. ..+.||+...+.|+
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Ft 562 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFV 562 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEE
Confidence 368899999999999996431 112688888765321 46788999999999
Q ss_pred cCCceeeEEecc---ChhhHhcccEEEEeccc
Q 013385 390 ADNPGAWAFHCH---IEPHFHIGMGVVLALGV 418 (444)
Q Consensus 390 adnpG~w~~HCH---i~~H~~~GM~~~~~~~~ 418 (444)
++.||.|.|||| ...|. ||...|.+.+
T Consensus 563 a~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 563 AANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 999999999999 45775 9999987654
No 85
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.58 E-value=0.0002 Score=74.43 Aligned_cols=77 Identities=5% Similarity=-0.010 Sum_probs=62.2
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCc------------------------cc---eeeEeeeEEe
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN------------------------YV---QPFEVDDMDI 149 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~------------------------~v---~p~~v~~~~i 149 (444)
..+.++.|++++|+|+|.+. ..+.|+|++|.|+|++.+|. ++ ++...|++.|
T Consensus 472 ~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v 550 (612)
T 2g23_A 472 LGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQV 550 (612)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEE
T ss_pred CceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEE
Confidence 36889999999999999974 46799999999999987542 11 2236799999
Q ss_pred cCCceEEEEEecCCCCCcceEEEEEe
Q 013385 150 YSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 150 ~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
.|||+..|.++++. .+|.|-++...
T Consensus 551 ~Pg~~~~i~~~~~~-~pG~w~~HCHi 575 (612)
T 2g23_A 551 PGPQGLRVMGKFDG-AYGRFMYHCHL 575 (612)
T ss_dssp CSSEEEEEEEECCS-CCEEEEEEESS
T ss_pred CCCcEEEEEEEeCC-CCccEEEEeCc
Confidence 99999999999984 36888777654
No 86
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.44 E-value=0.00092 Score=69.89 Aligned_cols=81 Identities=11% Similarity=-0.078 Sum_probs=48.5
Q ss_pred EEccCCCEEEEEEEeCCcCCCC--CCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEE
Q 013385 312 YMLGLNTTVDVILQNANAIRPN--LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 389 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~--~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ 389 (444)
+.++ +..++|+|.|.+..... .-..|-.++.++.|+||+...+ +-+ ..+....|...+++.|.+|+++-|-++
T Consensus 267 ~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~-~l~---~Pv~v~~p~~~~~l~i~pGeRydVlV~ 341 (612)
T 3gyr_A 267 ADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGG-LLP---RPVPVDFDDTLPVLSAAPAERFDLLVD 341 (612)
T ss_dssp EEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTE-EEE---EEEEECSSSSSSSEEECTTCEEEEEEE
T ss_pred Eecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCC-ccc---cceeccCcccccEEEeccceEEEEEEE
Confidence 4444 55799999997643100 0002344444557999998533 211 111122356678999999999998888
Q ss_pred cCC-ceeeE
Q 013385 390 ADN-PGAWA 397 (444)
Q Consensus 390 adn-pG~w~ 397 (444)
++. +|.++
T Consensus 342 ~~~~~~~~~ 350 (612)
T 3gyr_A 342 FRALGGRRL 350 (612)
T ss_dssp CTTCTTCEE
T ss_pred CCCCCceEE
Confidence 876 45444
No 87
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.18 E-value=0.002 Score=50.04 Aligned_cols=79 Identities=10% Similarity=0.171 Sum_probs=53.0
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|+ |.+.. .|-+.++...+ ...++. . ..-.+...+.+|+...+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~------~H~v~~~~~~~------p~g~~~---~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGF------PHNIVFDEDAV------PAGVDA---D------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECTTSS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEeCCCC------cccccc---c------cccccccccCCCCEEEEEc--
Confidence 4899999999886 65544 67665543110 000110 0 0113446788898877776
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|+|-+ |...||...+.+
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 789999999986 999999988764
No 88
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.18 E-value=0.00071 Score=56.34 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=50.5
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCC-----------------ccce----eeEeeeEEecCCce
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG-----------------NYVQ----PFEVDDMDIYSGES 154 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG-----------------~~v~----p~~v~~~~i~~GeR 154 (444)
+..++|++|++++|+|+|.+... .|.+.+...+. .++. ....++..|.+||+
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet 106 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNET 106 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCE
T ss_pred CCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCE
Confidence 45799999999999999987542 56666664321 1221 12245677999999
Q ss_pred EEEEEecCCCCCcceEEEEE
Q 013385 155 YSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 155 ~dV~v~~~~~~~g~y~i~~~ 174 (444)
+++.+++++ +|.|++.-.
T Consensus 107 ~~v~f~~~~--pG~y~f~C~ 124 (139)
T 2aan_A 107 VEVTFTAPA--AGTYLYICT 124 (139)
T ss_dssp EEEEEECCS--SEEEEEECC
T ss_pred EEEEEECCC--CeEEEEEcC
Confidence 999999875 789988654
No 89
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.09 E-value=0.0012 Score=53.70 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=50.2
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.++++.|++|.|+..+ . .|-+..+.. .++ .-.+.+.+.+|+...+.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF-- 69 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---K------SHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA-- 69 (124)
T ss_dssp EEEECTTCEEEEECSS---S------SCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--
T ss_pred EEEECCCCEEEEEECC---C------CccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--
Confidence 3899999999988433 3 676665421 111 001223345777666666
Q ss_pred CCceeeEEeccChhhHhcccEEEEeccc
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
+.||.|.|||- .|...||...+.++.
T Consensus 70 ~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 70 EKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 78999999995 899999999887763
No 90
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.02 E-value=0.002 Score=52.36 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=50.3
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|++.| . .|-+..+.. .++ .-.+.+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P------------~g~~~f~~~pg~t~s~TF-- 68 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD---K------SHNVEAIKE----------ILP------------EGVESFKSKINESYTLTV-- 68 (123)
T ss_dssp EEEECTTEEEEEEESS---T------TCCCEECTT----------SSC------------TTCCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEEECC---C------CceEEEcCC----------cCC------------CCccceecCCCCEEEEEe--
Confidence 3899999999998765 2 455554321 111 000112245777777776
Q ss_pred CCceeeEEeccChhhHhcccEEEEeccc
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
+.||.|.|+|- .|...||...+.++.
T Consensus 69 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 69 TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 78999999999 899999999997763
No 91
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.99 E-value=0.0025 Score=50.26 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=48.8
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|.|+ |.+.. .|-+++....- +.. . -++-.+.+|+...+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-----~~~---------------~-~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVM------PHNVAFKKGIV-----GED---------------A-FRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTTS-----SSS---------------C-EECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------cEEEEEeCCCC-----Ccc---------------c-ccccccCCCCEEEEEe--
Confidence 4899999999887 76654 67666543210 000 0 1233467888777777
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.|.|+|-+ |. ||...+.+
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 789999999987 76 99888764
No 92
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.93 E-value=0.0013 Score=53.79 Aligned_cols=73 Identities=19% Similarity=0.205 Sum_probs=47.8
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|.|++.|. .|-+..+.. .++ .-...+.+.+|+...+.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---------~H~v~~~~~----------~~P------------~g~~~f~s~pGet~s~TF-- 70 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---------GHNSALMKG----------GAP------------EGAETWKGKINEEITVTL-- 70 (127)
T ss_dssp EEEECTTCEEEEECSSS---------SCCCEECTT----------CSC------------TTCCCCBCCTTCCCEEEC--
T ss_pred EEEECCCCEEEEEECCC---------CceEEEccC----------cCC------------CCccceecCCCCEEEEEe--
Confidence 48999999999986541 354444321 011 000112234677655555
Q ss_pred CCceeeEEeccChhhHhcccEEEEeccc
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
+.||.|.|||- .|...||...+.++.
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999997654
No 93
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.78 E-value=0.0044 Score=51.02 Aligned_cols=71 Identities=15% Similarity=0.171 Sum_probs=49.5
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|++|+|+ |.+.. .|-+++.... .|. .. -++-.+.+|+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~-------------~~-~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE-------------DA-FRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc-------------cc-ccccccCCCCEEEEEc--
Confidence 4899999999986 76655 7877764321 010 01 1233467888777777
Q ss_pred CCceeeEEeccChhhHhcccEEEEec
Q 013385 391 DNPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+.||.+.|||-+ |. ||...+.+
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 789999999987 76 99988764
No 94
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.77 E-value=0.0067 Score=48.20 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=45.5
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
++.+.+++|++++|++.|.... ...|.+.+. | + ...+.|||++++.+.+++ +|.|++.-.
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~-------~-~~~i~pG~~~~~~f~~~~--~G~y~~~C~ 96 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G-------V-QEVIKAGETKTISFTADK--AGAFTIWCQ 96 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T-------E-EEEECTTCEEEEEEECCS--CEEEEEBCS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C-------c-eeEeCCCCEEEEEEECCC--CEEEEEECC
Confidence 3579999999999999999854 334455443 1 1 567999999999999875 799988543
No 95
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.21 E-value=0.025 Score=46.19 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=60.6
Q ss_pred EEccCC-CEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch--h----hcccCC---CCC-CccceEEeCC
Q 013385 312 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D----EKKFNL---KNP-PLKNTAVIFP 380 (444)
Q Consensus 312 ~~~~~g-~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~--~----~~~~n~---~~p-~~rDTv~v~~ 380 (444)
+.++.| +.|.+++.|.+.. + ---=+|.|-+...+. .... + ....++ .++ .+..+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~--~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------P--KTGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------C--HHHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------c--ccccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 899999 9999999998754 2 000133454433221 0000 0 000011 011 2345667899
Q ss_pred CcEEEEEEEcC---CceeeEEeccChhhHhcccEEEEec
Q 013385 381 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 381 ~g~v~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
|+...|.|.++ .||.+-|.|-+--|.. ||-..|.+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V 127 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEE
Confidence 99999999987 8999999999989988 89888754
No 96
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.15 E-value=0.016 Score=46.98 Aligned_cols=36 Identities=31% Similarity=0.574 Sum_probs=28.8
Q ss_pred CCCcEEEEEEEcCCceeeEEeccChhhHhcccEEEEeccc
Q 013385 379 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 379 ~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
.+|+...+.| +.||.|.|+|- .|...||...+.+.+
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677655555 78999999997 599999999997654
No 97
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=96.08 E-value=0.0072 Score=47.25 Aligned_cols=73 Identities=16% Similarity=0.297 Sum_probs=46.9
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
++.+++++|++++| +|.+.. ...|++.+..+.. .+|..-.....+.+.|.+||++++-+.++. .+|.||+.-.
T Consensus 18 p~~i~v~~Gd~V~~--~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~-~~G~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDF-PAGTYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTS-CSEEEEEECT
T ss_pred CCEEEEcCCCEEEE--EECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCC-CCeeEEEEeC
Confidence 45899999998865 687643 3566666653321 111111112246788999999999888743 4799998644
No 98
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.03 E-value=0.01 Score=48.42 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=45.4
Q ss_pred ceEEEE-cCCCeEEEEEEecCcce----eEEEEEcCcc-eEEEEe-------CCccceee----EeeeEEecCCceEEEE
Q 013385 96 PQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVEA-------DGNYVQPF----EVDDMDIYSGESYSVL 158 (444)
Q Consensus 96 ~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via~-------DG~~v~p~----~v~~~~i~~GeR~dV~ 158 (444)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++. |-.++.+- ...+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 357999 99999999999998652 2333333211 000001 11222211 1223369999999999
Q ss_pred EecC--CCCCcceEEE
Q 013385 159 LTTN--QDPSYNYWIS 172 (444)
Q Consensus 159 v~~~--~~~~g~y~i~ 172 (444)
++++ + ++++|+..
T Consensus 97 f~~~~l~-~G~~Y~f~ 111 (128)
T 1nwp_A 97 FDVSKLA-AGEKYGFF 111 (128)
T ss_dssp EEGGGSC-TTSCEEEE
T ss_pred EeccccC-CCceEEEE
Confidence 9986 4 34569874
No 99
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.96 E-value=0.039 Score=42.70 Aligned_cols=58 Identities=12% Similarity=0.235 Sum_probs=43.9
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
..+++++|++++|++.|.+... ..|.+++... ...+.+|+..++.+++++ +|.|.+.-
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~-H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~--~G~Y~y~C 85 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSE-HTFTIKKLGI----------------DVVVESGKEKNITVKPKS--AGTYELIC 85 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSC-EEEEEGGGTE----------------EEEECTTCEEEEEECCCS--CEEEEEEC
T ss_pred CEEEECCCCEEEEEEEcCCCce-EEEEEecCCc----------------ceeecCCcceeEEEeccc--CceEEEEC
Confidence 4799999999999999987543 3555554432 245789999999999876 78997753
No 100
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.95 E-value=0.013 Score=47.93 Aligned_cols=77 Identities=21% Similarity=0.224 Sum_probs=45.8
Q ss_pred ceEEEE-cCCCeEEEEEEecCcce----eEEEEEcCcc-eEEEE-------eCCcccee---e-EeeeEEecCCceEEEE
Q 013385 96 PQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQP---F-EVDDMDIYSGESYSVL 158 (444)
Q Consensus 96 ~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~p---~-~v~~~~i~~GeR~dV~ 158 (444)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++ .+-.++.+ . ...+-.|+|||+++|.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 458999 99999999999998542 2233333221 00000 01122211 1 1133468999999999
Q ss_pred EecC--CCCCcceEEEE
Q 013385 159 LTTN--QDPSYNYWISA 173 (444)
Q Consensus 159 v~~~--~~~~g~y~i~~ 173 (444)
++++ + ++++|+..-
T Consensus 97 f~~~~l~-~G~~Y~f~C 112 (129)
T 2ccw_A 97 FDVSKIA-AGENYAYFC 112 (129)
T ss_dssp EEGGGSC-TTCCEEEEC
T ss_pred EeccccC-CCceEEEEe
Confidence 9997 4 456698743
No 101
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.85 E-value=0.019 Score=46.54 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=29.6
Q ss_pred eCCCcEEEEEEEcCCceeeEEeccChhhHhcccEEEEeccc
Q 013385 378 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 378 v~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
+.+|+...+.| +.||.|.|+|- .|...||...+.+.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 45777655555 78999999998 599999999997654
No 102
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.83 E-value=0.016 Score=47.31 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=44.5
Q ss_pred ceEEEE-cCCCeEEEEEEecCcce----eEEEEEcCcc-eEEEE-------eCCccce---ee-EeeeEEecCCceEEEE
Q 013385 96 PQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQ---PF-EVDDMDIYSGESYSVL 158 (444)
Q Consensus 96 ~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~---p~-~v~~~~i~~GeR~dV~ 158 (444)
+..|+| ++|++++|.+.|.+... .+.|-|.... +.-++ .|-.++. +. ...+-.|++||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 347999 99999999999998542 2233332210 00000 1112221 11 1233468999999999
Q ss_pred EecCCCCCc-ceEEE
Q 013385 159 LTTNQDPSY-NYWIS 172 (444)
Q Consensus 159 v~~~~~~~g-~y~i~ 172 (444)
++++.-.+| +|+..
T Consensus 96 f~~~~l~~G~~Y~f~ 110 (128)
T 2iaa_C 96 FDVSKLKEGEDYAFF 110 (128)
T ss_dssp EESSCCCTTCCEEEE
T ss_pred EeccccCCCceEEEE
Confidence 998721245 69874
No 103
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.82 E-value=0.02 Score=48.83 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=60.3
Q ss_pred EEc-cCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch-----hhcccCC---CC-CCccceEEeCCC
Q 013385 312 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-----DEKKFNL---KN-PPLKNTAVIFPY 381 (444)
Q Consensus 312 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~n~---~~-p~~rDTv~v~~~ 381 (444)
+.| +.|+.|.|+|.|.+.. . -=-=+|.|-+...+ .+..- .....++ .+ -.+..+..|.+|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p--~~~m~Hn~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------P--KASMGHNLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------C--HHHHCBCCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------c--cccccceEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 889 9999999999998754 2 00002344333321 10000 0000011 01 123456678999
Q ss_pred cEEEEEEEcC--CceeeEEeccChhhHhcccEEEEec
Q 013385 382 GWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 382 g~v~irf~ad--npG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
+...|.|.++ .||.|-|+|-+--|.. ||-..|.+
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V 165 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTL 165 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEE
Confidence 9999999988 8999999999999988 89888765
No 104
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.69 E-value=0.058 Score=44.35 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=51.0
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|+|++.|.+. .|- |+|-+.+ . -+.+.||....+.|+++
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~-----------------~---k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN-----------------I---NVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS-----------------C---EEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC-----------------c---eeEeCCCCcEEEEEEcC
Confidence 899999999999998752 343 4442211 1 14566788788999999
Q ss_pred CceeeEEeccC---hhhHhcccEEEEec
Q 013385 392 NPGAWAFHCHI---EPHFHIGMGVVLAL 416 (444)
Q Consensus 392 npG~w~~HCHi---~~H~~~GM~~~~~~ 416 (444)
.||.+.++|.. ..| .+|-..+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999987 667 488777654
No 105
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.61 E-value=0.041 Score=55.75 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=56.4
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|+|++.|.+.. ....|-|.+.++.. -+.+.||....+.|++
T Consensus 559 eI~VP~GdtVrfiLTN~D~v---eDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQI---EDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVA 608 (638)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEEC
T ss_pred EEEEecCceeEEEEecCCcC---CCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEc
Confidence 57899999999999996421 01166665544321 1257788899999999
Q ss_pred CCceeeEEeccChhhHh-cccEEEEeccc
Q 013385 391 DNPGAWAFHCHIEPHFH-IGMGVVLALGV 418 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~-~GM~~~~~~~~ 418 (444)
+.||.|.+||...-|.. .+|...+.+.+
T Consensus 609 dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 609 DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999999755442 57888876643
No 106
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=95.28 E-value=0.041 Score=45.45 Aligned_cols=69 Identities=23% Similarity=0.226 Sum_probs=46.8
Q ss_pred ceEEEEcCCCeEEEEEEe--cCcceeEEEEEcCcceEEEEe----------------CCccce-----eeEeeeEEecCC
Q 013385 96 PQILHVQPNKTYRLRIAS--TTALASLNLAVKNHKMVVVEA----------------DGNYVQ-----PFEVDDMDIYSG 152 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliN--a~~~~~~~~~i~~h~~~via~----------------DG~~v~-----p~~v~~~~i~~G 152 (444)
+..++|++|++++|++.| .+. -.|.+.+... |..++. ....++..|.+|
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~--------~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLG--------VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAG 103 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC--------CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTT
T ss_pred CCeEEECCCCEEEEEEECCCCCC--------CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCC
Confidence 357999999999999999 332 2344444321 111221 123456789999
Q ss_pred ceEEEEEecCCCCCcceEEEEE
Q 013385 153 ESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 153 eR~dV~v~~~~~~~g~y~i~~~ 174 (444)
++.++.+++++ +|.|++.-.
T Consensus 104 ~~~~~~~~~~~--~G~y~f~C~ 123 (140)
T 1qhq_A 104 ESGSVTFRTPA--PGTYLYICT 123 (140)
T ss_dssp EEEEEEEECCS--SEEEEEECC
T ss_pred ceeEEEEEeCC--CeeEEEEeC
Confidence 99999999975 789988654
No 107
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.24 E-value=0.023 Score=48.52 Aligned_cols=74 Identities=22% Similarity=0.340 Sum_probs=45.6
Q ss_pred eEEEE-cCCCeEEEEEEecCcceeEEEEEcCcceEEEEeC--------------Ccccee----eEeeeEEecCCceEEE
Q 013385 97 QILHV-QPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD--------------GNYVQP----FEVDDMDIYSGESYSV 157 (444)
Q Consensus 97 ~~~~v-~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D--------------G~~v~p----~~v~~~~i~~GeR~dV 157 (444)
..|+| ++|++++|.|.|.+.... .--+|.+.+...+ -.++.+ .......|.+||+++|
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~---~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv 134 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPK---ASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL 134 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCH---HHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCCcc---ccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence 47999 999999999999985420 0002333332211 122221 1123446899999999
Q ss_pred EEecCCCCCcceEEEE
Q 013385 158 LLTTNQDPSYNYWISA 173 (444)
Q Consensus 158 ~v~~~~~~~g~y~i~~ 173 (444)
.++++...+|.|++.-
T Consensus 135 tf~~~~lkpG~Y~f~C 150 (167)
T 3ay2_A 135 TLDPAKLADGDYKFAC 150 (167)
T ss_dssp EECGGGGTTSCEEEEC
T ss_pred EEecCCCCCcEEEEEc
Confidence 9998721268898753
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.14 E-value=0.12 Score=42.04 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=59.0
Q ss_pred EEc-cCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch--h--h--cccCCC---CC-CccceEEeCC
Q 013385 312 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D--E--KKFNLK---NP-PLKNTAVIFP 380 (444)
Q Consensus 312 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~--~--~--~~~n~~---~p-~~rDTv~v~~ 380 (444)
+.+ +.|+.|.+++.|.+.. + ---=+|.|-+...+ ....- + . ...++. ++ ....|..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 888 8899999999998754 2 00013345443322 11000 0 0 000111 11 1235667899
Q ss_pred CcEEEEEEEcC--Ccee-eEEeccChhhHhcccEEEEec
Q 013385 381 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 381 ~g~v~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 416 (444)
|+...|-|.++ .||. +-|.|-+--|.. ||-..|.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V 127 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEE
Confidence 99999999998 7865 999999999988 89888765
No 109
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.07 E-value=0.022 Score=45.97 Aligned_cols=76 Identities=21% Similarity=0.288 Sum_probs=45.7
Q ss_pred eEEEEcC-CCeEEEEEEecCcce----eEEEEEcCc-ceEEEEe-------CCcccee----eEeeeEEecCCceEEEEE
Q 013385 97 QILHVQP-NKTYRLRIASTTALA----SLNLAVKNH-KMVVVEA-------DGNYVQP----FEVDDMDIYSGESYSVLL 159 (444)
Q Consensus 97 ~~~~v~~-g~~~RlRliNa~~~~----~~~~~i~~h-~~~via~-------DG~~v~p----~~v~~~~i~~GeR~dV~v 159 (444)
..|.|+. |+++||.|.|.|... .++|-|... .+.-++. |-.|+++ .-..+-.|++||++++.+
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 4799975 999999999999652 223333211 1110111 3344532 223455699999999999
Q ss_pred ecCC-CCCcceEEE
Q 013385 160 TTNQ-DPSYNYWIS 172 (444)
Q Consensus 160 ~~~~-~~~g~y~i~ 172 (444)
+++. .++|+|...
T Consensus 98 ~~~~l~~~G~y~f~ 111 (125)
T 3fsa_A 98 DVSKLKEGEQYMFF 111 (125)
T ss_dssp EGGGC---CCEEEE
T ss_pred eCcCcCCCccEEEE
Confidence 9972 136888764
No 110
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=94.92 E-value=0.077 Score=42.76 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=26.3
Q ss_pred CCCcEEEEEEEcCCceeeEEeccChhhHhcccEEEEeccc
Q 013385 379 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 418 (444)
Q Consensus 379 ~~~g~v~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 418 (444)
.+|+...+.| +.||.|.|+|-+ |.. |...+.+.+
T Consensus 59 ~~g~t~~~tF--~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 59 KINENYKVTF--TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CTTCCEEEEE--CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 5677766666 789999999987 766 888886543
No 111
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=94.54 E-value=0.042 Score=46.31 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=42.5
Q ss_pred eEEEEcCCCeEEEEEEecCcceeEEEEEcCc--ceEEEEeCCccceeeEeeeEEecCCc--eEEEEEecCCCCCcceEEE
Q 013385 97 QILHVQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGE--SYSVLLTTNQDPSYNYWIS 172 (444)
Q Consensus 97 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h--~~~via~DG~~v~p~~v~~~~i~~Ge--R~dV~v~~~~~~~g~y~i~ 172 (444)
+.|+|++|++++|++.|.+....+.|.+... .+.....+ ..+.+..-....|.||| ..++.+++ + +|.||..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tft~-~--pGtY~y~ 136 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTWHP-T--AGTYYYV 136 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEECC-C--SEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEEEE-C--CceEEEE
Confidence 4899999999999999974322333333311 11000000 01111100112679999 88888887 5 7999986
Q ss_pred EE
Q 013385 173 AG 174 (444)
Q Consensus 173 ~~ 174 (444)
-.
T Consensus 137 C~ 138 (154)
T 2cal_A 137 CQ 138 (154)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 112
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.48 E-value=0.026 Score=46.08 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=45.8
Q ss_pred ceEEEEcCC-CeEEEEEEecCcceeEEEEEcCcceEEEEeC--------C-------ccce---ee-EeeeEEecCCceE
Q 013385 96 PQILHVQPN-KTYRLRIASTTALASLNLAVKNHKMVVVEAD--------G-------NYVQ---PF-EVDDMDIYSGESY 155 (444)
Q Consensus 96 ~~~~~v~~g-~~~RlRliNa~~~~~~~~~i~~h~~~via~D--------G-------~~v~---p~-~v~~~~i~~GeR~ 155 (444)
+..|+|++| ++++|.+.|.+...- ..-+|.+.+.... | .++. +. ...+..|.|||++
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~---~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPK---TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCH---HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcc---cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 358999999 999999999985420 0013443333211 0 1221 10 1133468999999
Q ss_pred EEEEecCC-CCCcceEEEE
Q 013385 156 SVLLTTNQ-DPSYNYWISA 173 (444)
Q Consensus 156 dV~v~~~~-~~~g~y~i~~ 173 (444)
+|.++++. ..+|+||+.-
T Consensus 94 svtf~~~~~~~~G~Y~f~C 112 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFC 112 (129)
T ss_dssp EEEEEGGGCCTTSCEEEEC
T ss_pred EEEEeccccCCCceEEEEe
Confidence 99999861 0368998753
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.16 E-value=0.19 Score=40.72 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=59.6
Q ss_pred EEc-cCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch--h--h--cccCC---CCC-CccceEEeCC
Q 013385 312 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D--E--KKFNL---KNP-PLKNTAVIFP 380 (444)
Q Consensus 312 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~--~--~--~~~n~---~~p-~~rDTv~v~~ 380 (444)
+.+ +.|+.|.+++.|.+.. + ---=+|.|-+...+ ....- + . ...++ .++ ....|..|.|
T Consensus 19 i~V~k~G~~vtv~~~N~g~~------p--~~~m~Hn~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKL------P--KAAMGHNVVVSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEECTTCSEEEEEEEECSCS------C--HHHHCBCCEEEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCcEEEEEEEECCCC------c--ccCCCceEEEcccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 788 8899999999998754 2 00113344333211 10000 0 0 00011 111 2335667899
Q ss_pred CcEEEEEEEcC--Cce-eeEEeccChhhHhcccEEEEec
Q 013385 381 YGWTALRFVAD--NPG-AWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 381 ~g~v~irf~ad--npG-~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
|+...|-|.+. .|| .+-|.|-+--|.. ||-..|.+
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 126 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIEL 126 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99999999998 899 4999999999998 89988765
No 114
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=94.14 E-value=0.027 Score=43.98 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=41.4
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++|+ |.+.. ...|.+.+..+.. .+|..-.....+.+.+.+||++++-+.++. .+|.||+.-
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~-~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~-~~G~y~y~C 90 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP-PHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADA-PAGEYTFYC 90 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTC-CSEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC-CceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCC-CCceEEEEe
Confidence 357999999998775 77632 2233333221100 012111111134677999999999776633 479999863
No 115
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.76 E-value=0.23 Score=40.28 Aligned_cols=94 Identities=17% Similarity=0.234 Sum_probs=58.8
Q ss_pred EEc-cCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCch--h----hcccCCC---CC-CccceEEeCC
Q 013385 312 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D----EKKFNLK---NP-PLKNTAVIFP 380 (444)
Q Consensus 312 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~--~----~~~~n~~---~p-~~rDTv~v~~ 380 (444)
+.+ +.|+.|.+++.|.+.. + ---=+|.|-+...+. ...- + ....++. ++ ....|-.|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 89 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccc--hhhHHHHHhhccccccccccccchhheeeeeeCC
Confidence 889 8999999999998754 2 000123443332210 0000 0 0000111 11 2334557899
Q ss_pred CcEEEEEEEcC--Ccee-eEEeccChhhHhcccEEEEec
Q 013385 381 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 381 ~g~v~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 416 (444)
|+...|-|.+. .||. +-|.|-+--|.. ||-..|.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99999999997 7876 999999999998 89887754
No 116
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.75 E-value=0.35 Score=41.15 Aligned_cols=71 Identities=17% Similarity=0.271 Sum_probs=52.6
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|+|.+.|.+. .|-|. |-+.+ .. +.+.||....+.|.++
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf~-------IP~lg-----------------ik---~da~PG~~n~~~~~~~ 140 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGFH-------VEGTN-----------------IN---VEVLPGEVSTVRYTFK 140 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEEE-------ETTSS-----------------CE---EEECTTBCEEEEEECC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEEE-------ECCCC-----------------eE---EEecCCceeEEEEEeC
Confidence 889999999999999753 45543 32221 11 3455788888999999
Q ss_pred CceeeEEeccC-hhhHhcccEEEEec
Q 013385 392 NPGAWAFHCHI-EPHFHIGMGVVLAL 416 (444)
Q Consensus 392 npG~w~~HCHi-~~H~~~GM~~~~~~ 416 (444)
.||.+.+.|.. .-+...+|...+.+
T Consensus 141 kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 141 RPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp SCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 99999999995 55566788877754
No 117
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.34 E-value=0.34 Score=38.94 Aligned_cols=91 Identities=15% Similarity=0.225 Sum_probs=59.7
Q ss_pred EEccC-CCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCc---h-hh--cccCC----CCCCccceEEeCC
Q 013385 312 YMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E-DE--KKFNL----KNPPLKNTAVIFP 380 (444)
Q Consensus 312 ~~~~~-g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~---~-~~--~~~n~----~~p~~rDTv~v~~ 380 (444)
+.++. |+.|.++|.|.+.+ |---=||+|-+...+ .... + .. ..-++ +....-.|..|.|
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~--------p~~~M~Hn~Vl~~~~--~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~p 89 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL--------PKNVMGHNWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGS 89 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC--------CHHHHCBCCEEEEHH--HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCcc--------cccccCceEEEcccc--hHHHHHHHHHhcChhhccCCCCCccceeccceeCC
Confidence 88876 99999999998855 322236677554321 1110 0 00 01121 1224557778999
Q ss_pred CcEEEEEEEcC---CceeeEEeccChhhHhcccEEEEec
Q 013385 381 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 416 (444)
Q Consensus 381 ~g~v~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 416 (444)
|+...|-|.+. .+|.|-|-|- -|. ||-..+.+
T Consensus 90 Ges~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 90 GEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99999999987 8999999999 888 89887754
No 118
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=92.86 E-value=0.37 Score=36.67 Aligned_cols=68 Identities=21% Similarity=0.332 Sum_probs=41.5
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
|..+++++|++++| +|.+.. ...|.+.+..+ .+|..-.....+.+.+.+||++.+-+ ++ +|.|++.-.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf--~~--~G~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKL--TA--AGEYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS--CEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----CCccccccccccceecCCCCEEEEEe--CC--CeEEEEEcC
Confidence 35799999998876 687642 34555544321 11211111123568899999998854 43 689987644
No 119
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=92.48 E-value=0.12 Score=39.93 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=40.5
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCcc-------cee-eEeeeEEecCCceEEEEEecCCCCCc
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY-------VQP-FEVDDMDIYSGESYSVLLTTNQDPSY 167 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~-------v~p-~~v~~~~i~~GeR~dV~v~~~~~~~g 167 (444)
|..+++++|++++|+ |.+.. .|.+.+...+|.. ..+ ...+.+.+.+||++.+- ++ .+|
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~t--f~--~~G 81 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAK--VS--TPG 81 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEEC--CC--SCE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEEE--eC--CCe
Confidence 457999999999875 77632 3555544334421 001 11245778999998884 44 478
Q ss_pred ceEEEEE
Q 013385 168 NYWISAG 174 (444)
Q Consensus 168 ~y~i~~~ 174 (444)
.|++.-.
T Consensus 82 ~y~y~C~ 88 (102)
T 1kdj_A 82 TYTFYCT 88 (102)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 9987543
No 120
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=92.06 E-value=0.31 Score=37.15 Aligned_cols=67 Identities=9% Similarity=0.168 Sum_probs=40.1
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
|..+++++|++++|+ |.+.. ...|.+.+...- |..-.....+.+.+.+||.+.+-+ + .+|.|++.-.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf--~--~~G~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS-PHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTF--T--EPGTYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEEC--C--SCEEEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEc--C--CCeEEEEEcC
Confidence 347999999998876 76532 334444432110 000001123578899999998754 4 3789988644
No 121
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=91.78 E-value=0.64 Score=34.63 Aligned_cols=60 Identities=15% Similarity=0.277 Sum_probs=38.9
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
|..+.+++|++++|+ |.+.. ...+.+.+. . +...+...+.+|+.+.+-+ + .+|.|++.-.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~~---------~---~~~~~~~~~~~g~~~~~~f--~--~~G~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA-PHNVVVEGQ---------P---ELSHKDLAFSPGETFEATF--S--EPGTYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEETTC---------G---GGCEEEEECSTTCEEEEEC--C--SCEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCC---------C---ccCcccceeCCCCEEEEEe--C--CCEEEEEEeC
Confidence 347999999998875 66532 334444431 1 1224567899999988754 4 4789988643
No 122
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.29 E-value=0.71 Score=47.36 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=47.9
Q ss_pred CceEEEEcCCCeEEEEEEecCcc--eeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEE
Q 013385 95 APQILHVQPNKTYRLRIASTTAL--ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 172 (444)
Q Consensus 95 ~~~~~~v~~g~~~RlRliNa~~~--~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~ 172 (444)
.++.++|++|++++|++.|.... ..+.|.+.++.+. ..+.||+..++-+++++ +|.||..
T Consensus 511 ~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~~--pGtY~yh 572 (595)
T 1fwx_A 511 SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAAN--PGVYWYY 572 (595)
T ss_dssp SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECCC--CEEEEEE
Confidence 45689999999999999996432 2456666665421 57899999999999976 7999987
Q ss_pred EE
Q 013385 173 AG 174 (444)
Q Consensus 173 ~~ 174 (444)
-.
T Consensus 573 C~ 574 (595)
T 1fwx_A 573 CQ 574 (595)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 123
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=90.70 E-value=0.45 Score=36.12 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=39.8
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccc--eeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV--QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v--~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++|+ |.+.. .|.+.+.+.+. +. .....+.+.+.+||++.+-+ + .+|.|++.-
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf--~--~~G~y~y~C 82 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTL--G--TPGTYSFYC 82 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEEC--C--SCSEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEEe--C--CCeEEEEEc
Confidence 347999999998765 76531 35655544321 11 01113567789999998854 4 478998754
Q ss_pred E
Q 013385 174 G 174 (444)
Q Consensus 174 ~ 174 (444)
.
T Consensus 83 ~ 83 (97)
T 1b3i_A 83 T 83 (97)
T ss_dssp S
T ss_pred c
Confidence 3
No 124
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=90.31 E-value=0.82 Score=34.77 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=38.6
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++|+ |.+.. .+.+.+....+ -+|........+.+.+.+||++.+-+ + .+|.|++.-
T Consensus 17 P~~i~v~~GdtV~~~--n~~~~-~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~--~~G~y~y~C 83 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAGF-PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--S--TPGVYGVYC 83 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--C--SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC-CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--C--CCEEEEEEc
Confidence 458999999998774 76542 23333332100 01211111223457899999998855 4 368998753
No 125
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=89.23 E-value=0.7 Score=35.78 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=37.9
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
+..+++++|++++| +|.... .+.+.+.+. .||.. . .++-.|.+|+++.+-+ + .+|.|++.-.
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~-~H~v~~~~~------~~g~~--~--~~~~~~~pG~~~~~tf--~--~~G~y~y~C~ 93 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM-PHNVHFVAG------VLGEA--A--LKGPMMKKEQAYSLTF--T--EAGTYDYHCT 93 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS-CBCCEECTT------TSSSS--C--EECCCBCTTEEEEEEE--C--SCEEEEEECS
T ss_pred CCEEEECCCCEEEE--EECCCC-CEEEEEcCC------CCCcc--c--ccccccCCCCEEEEEe--C--CCEEEEEEeC
Confidence 45899999999877 487652 223333321 13431 1 2223478999988766 3 3789998643
No 126
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=86.25 E-value=4.9 Score=31.89 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=49.6
Q ss_pred CCCeE--EEEEEecCcceeEEEEEc-Ccc--eEEEEeCCccce--------eeEeeeEEecCCceEEEEEecCC-CCCcc
Q 013385 103 PNKTY--RLRIASTTALASLNLAVK-NHK--MVVVEADGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 168 (444)
Q Consensus 103 ~g~~~--RlRliNa~~~~~~~~~i~-~h~--~~via~DG~~v~--------p~~v~~~~i~~GeR~dV~v~~~~-~~~g~ 168 (444)
.|+.+ .|.+.|.+... ..|.+. |++ +.|...+|..|- .+......|.|||...+-.+.++ ..+|.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 56677777543 355554 444 444444566552 33567899999999999999985 35799
Q ss_pred eEEEEEecCC
Q 013385 169 YWISAGVRGR 178 (444)
Q Consensus 169 y~i~~~~~~~ 178 (444)
|.+.+.....
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9999886543
No 127
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=85.29 E-value=1.2 Score=33.90 Aligned_cols=68 Identities=15% Similarity=0.311 Sum_probs=38.6
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce--eeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++| .|.+.. .+.+.+.+..+ .+|.... ....+.+.+.+||.+.+-+ ++ +|.|++.-
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~--~G~y~~~C 84 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF-PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--SN--KGEYSFYC 84 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CS--CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--CC--CceEEEEc
Confidence 45799999998877 677642 22333332211 0221110 0112346789999998855 43 68998754
Q ss_pred E
Q 013385 174 G 174 (444)
Q Consensus 174 ~ 174 (444)
.
T Consensus 85 ~ 85 (99)
T 1plc_A 85 S 85 (99)
T ss_dssp G
T ss_pred C
Confidence 3
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.28 E-value=4.8 Score=40.93 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=46.9
Q ss_pred ceEEEEcCCCeEEEEEEecCc--ceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
+..|.|+.|+++||.+-|... .-.+.|.|.++.+.+ .+.||+...+-+++++ +|.|+..-
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK~----------------DaiPGrtnsvtFtadk--PGvY~y~C 618 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVSM----------------EISPQQTSSITFVADK--PGLHWYYC 618 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEEE----------------EECTTCEEEEEEECCS--CEEEEEEC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCcee----------------eeCCCCeEEEEEEcCC--CEEEEEEC
Confidence 457899999999999999742 345677777665332 6789999999999986 79999854
Q ss_pred E
Q 013385 174 G 174 (444)
Q Consensus 174 ~ 174 (444)
.
T Consensus 619 S 619 (638)
T 3sbq_A 619 S 619 (638)
T ss_dssp C
T ss_pred C
Confidence 3
No 129
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=83.25 E-value=1.1 Score=34.04 Aligned_cols=68 Identities=21% Similarity=0.285 Sum_probs=38.5
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccce--eeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++| .|.+.. ...+.+.+..+ .+|.... ....+.+.|.+||++.+-++ + +|.|++.-
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~--~G~y~~~C 84 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF-PHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--E--KGTYKFYC 84 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--S--CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC-cceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEeC--C--CcEEEEEc
Confidence 34799999998776 677642 22233332111 1222110 01123467899999988653 3 68888754
Q ss_pred E
Q 013385 174 G 174 (444)
Q Consensus 174 ~ 174 (444)
.
T Consensus 85 ~ 85 (99)
T 1byp_A 85 A 85 (99)
T ss_dssp G
T ss_pred C
Confidence 3
No 130
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=81.84 E-value=2.3 Score=32.83 Aligned_cols=61 Identities=11% Similarity=0.136 Sum_probs=36.1
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+.|++|++++|+ |.+.. .|.+... ++. ......++-.|.+|+++.+-+ + .+|.|++.-
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~--------~H~v~~~--~~~-~~~~~~~s~~l~~g~~~~~tf--~--~~G~y~~~C 93 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGI-VGEDAFRGEMMTKDQAYAITF--N--EAGSYDYFC 93 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTT-SSSSCEECCCBCTTEEEEEEE--C--SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC--------cEEEEEe--CCC-CCcccccccccCCCCEEEEEe--C--CCEEEEEEe
Confidence 347999999998776 77643 2333221 111 000112334578999998766 3 368888754
No 131
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=81.08 E-value=0.99 Score=36.18 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=44.1
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
|..++|++|++++|.+-|. +|.++.. ++ ..|-....+.+.+|+.|++-+ + .+|.|++.-..
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~--~~P~g~~~f~~~pg~t~s~TF--~--~pG~y~y~C~~ 80 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAI--KE--ILPEGVESFKSKINESYTLTV--T--EPGLYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEEC--TT--SSCTTCCCCBCCTTCCEEEEE--C--SCEEEEEECGG
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--CC--cCCCCccceecCCCCEEEEEe--C--CCeEEEEEeCC
Confidence 3579999999998877663 3554432 11 112222344567999888777 3 36999986542
Q ss_pred cCCCCCCCCeEEEEEEc
Q 013385 176 RGRKPATPPALTLLNYH 192 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~ 192 (444)
.. ...-.+.|...
T Consensus 81 H~----~~GM~G~I~V~ 93 (123)
T 3erx_A 81 HF----GMGMVGLVQVG 93 (123)
T ss_dssp GT----TTTCEEEEEES
T ss_pred CC----cCCcEEEEEEC
Confidence 21 11245666655
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=80.78 E-value=6.3 Score=31.95 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=41.2
Q ss_pred EEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
.+.++.|+++||++-|... ...|.+.+..++ +.+.||+.-.+.+++++ +|.|+..-
T Consensus 61 ~l~Vp~G~~V~~~vts~DV--~Hsf~ip~~~~k----------------~d~~PG~~~~~~~~~~~--~G~y~~~C 116 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDV--IHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR--PGEYRIIC 116 (135)
T ss_dssp SEEEETTSEEEEEEEBSSS--CEEEEETTSSCE----------------EEECBTBCEEEEEECCS--CEEEEEEC
T ss_pred EEEEcCCCEEEEEEEeCCc--cceEEecCCCce----------------eEeCCCCcEEEEEEcCC--CEEEEEEC
Confidence 6899999999999988753 445566554432 35678988888888876 78998754
No 133
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=80.64 E-value=3 Score=33.68 Aligned_cols=61 Identities=10% Similarity=0.111 Sum_probs=36.8
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..+++++|++++|+ |.... .|.+... ++.. -....+...|.+||++++-+ + .+|.|++.-
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~--------~H~v~~~--~~~~-g~~~~~s~~l~pG~t~~~tF--~--~~G~y~y~C 119 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGIV-GEDAFRGEMMTKDQAYAITF--N--EAGSYDYFC 119 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTTS-SSSCEECCCBCTTEEEEEEE--C--SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC--------ceEEEEe--CCCC-CcccccccccCCCCEEEEEc--C--CCEEEEEEe
Confidence 458999999999875 77642 2333322 1110 00112344678999998766 3 368998753
No 134
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=76.83 E-value=3.2 Score=36.22 Aligned_cols=69 Identities=20% Similarity=0.228 Sum_probs=49.2
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|++.|.+.+.+ | .|+|-+.| .. +.+-||....+.|.++
T Consensus 43 l~lP~g~~V~~~lTS~DVi-------H-------SF~IP~lg-----------------vK---~daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVM-------H-------SFFIPRLG-----------------SQ---IYAMAGMQTRLHLIAN 88 (205)
T ss_dssp EEEETTSCEEEEEEESSSC-------E-------EEEEGGGT-----------------EE---EEECTTCCEEEEECCS
T ss_pred EEEeCCCEEEEEEecCCce-------e-------eEEecccC-----------------cE---EEecCCceEEEEEEeC
Confidence 8899999999999997753 4 46664432 22 2344677788999999
Q ss_pred CceeeEEeccChhhHh-cccEEEE
Q 013385 392 NPGAWAFHCHIEPHFH-IGMGVVL 414 (444)
Q Consensus 392 npG~w~~HCHi~~H~~-~GM~~~~ 414 (444)
.||.+...|--.-... ..|-..+
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v 112 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKA 112 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEE
T ss_pred CCeEEEEEcccccccchhhceEEE
Confidence 9999999998654433 3454444
No 135
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=75.11 E-value=11 Score=31.66 Aligned_cols=57 Identities=18% Similarity=0.254 Sum_probs=42.3
Q ss_pred EEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
.+.++.|+.+||++-|.. -...|.|.+..++ +.+.||+.-.+.+.+++ +|.|+..-.
T Consensus 94 ~l~VP~G~~Vr~~vTS~D--ViHsf~IP~lgik----------------~da~PG~~n~~~~~~~k--pG~y~g~Cs 150 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR--PGEYRIICN 150 (168)
T ss_dssp SEEEETTSEEEEEEECSS--SCEEEEETTSSCE----------------EEECTTBCEEEEEECCS--CEEEEEECC
T ss_pred EEEEeCCCeEEEEEecCC--ceEEEEECCCCeE----------------EEecCCceeEEEEEeCC--CEEEEEECC
Confidence 688999999999999863 4456667665432 34568988888888886 789987543
No 136
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=73.04 E-value=10 Score=29.75 Aligned_cols=46 Identities=24% Similarity=0.373 Sum_probs=32.4
Q ss_pred eEEEEEEecCcc-eeEEEEEcCcc-eEEEEeCCccceeeEeeeEEecCCceEEEEEec
Q 013385 106 TYRLRIASTTAL-ASLNLAVKNHK-MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 161 (444)
Q Consensus 106 ~~RlRliNa~~~-~~~~~~i~~h~-~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~ 161 (444)
.|+|+|+|.+.. ..|.|+++|.. +.++ | +. .+.|.+||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEE
Confidence 499999999966 56889998742 4433 2 11 3899999977665544
No 137
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=70.48 E-value=2.9 Score=33.36 Aligned_cols=59 Identities=17% Similarity=0.304 Sum_probs=34.1
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..++|++|++++|..-+. +|.+...+ +-. |-....+.+.+||.+.+-+ ++ +|.|++.-
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~~-~~~---p~~~~~~~~~pG~t~~~tF--~~--~G~y~y~C 78 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK-----------GHNVESIK-DMI---PEGAEKFKSKINENYVLTV--TQ--PGAYLVKC 78 (123)
T ss_dssp SSEEEECTTCEEEEEESSS-----------SCCCEECT-TCS---CTTCCCCBCCTTCCEEEEC--CS--CEEEEEEC
T ss_pred CCEEEECCCCEEEEEECCC-----------CeEEEEec-ccC---CCCccceecCCCCEEEEEe--CC--CEEEEEEe
Confidence 3579999999987754432 36554421 000 1111123456899877655 43 68998754
No 138
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=70.27 E-value=1.8 Score=34.81 Aligned_cols=60 Identities=18% Similarity=0.291 Sum_probs=36.6
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
|..++|++|++++|.+-|. +|.++.. ++. .|-....+.+.+||.+.+-+ + .+|.|++.-.
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF--~--~pG~y~y~C~ 81 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTL--S--KPGVYMYQCA 81 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEEC--C--SCEEEEEECT
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEe--C--CCeEEEEEeC
Confidence 4589999999988766552 3555432 221 12112234457899987666 3 3789988543
No 139
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=69.63 E-value=6.1 Score=36.03 Aligned_cols=69 Identities=23% Similarity=0.272 Sum_probs=48.5
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|++.+.+.+.. |- |+|-+.| ...| +-||....+.|.++
T Consensus 173 l~lP~g~~v~~~~tS~DVi-------Hs-------f~ip~l~-----------------~k~d---a~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVI-------HS-------WTVPAFG-----------------VKQD---AVPGRLAQLWFRAE 218 (262)
T ss_dssp EEEETTSEEEEEEEESSSC-------EE-------EEEGGGT-----------------EEEE---ECBTCCEEEEEECC
T ss_pred EEEecCCEEEEEEEECccc-------ce-------eeecccC-----------------ceEE---ecCCceeEEEEecC
Confidence 8899999999999987753 43 5554432 2234 34577778899999
Q ss_pred CceeeEEeccChhhHh-cccEEEE
Q 013385 392 NPGAWAFHCHIEPHFH-IGMGVVL 414 (444)
Q Consensus 392 npG~w~~HCHi~~H~~-~GM~~~~ 414 (444)
.||.+...|--.--.. ..|-..+
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v 242 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITV 242 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEE
T ss_pred CcEEEEEEChHhcccCcccCeEEE
Confidence 9999999998654332 3454444
No 140
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=66.05 E-value=4.6 Score=32.13 Aligned_cols=72 Identities=19% Similarity=0.318 Sum_probs=41.2
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
|..++|++|++++|+ |.+. +|.+.+.. | .+ |-....+.+.+|+.+.+-+ ++ +|.|++.-..
T Consensus 20 P~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~-~~-p~~~~~~~~~~g~t~~~tF--~~--~G~y~y~C~~ 80 (122)
T 2ux6_A 20 PASLKVAPGDTVTFI--PTDK---------GHNVETIK--G-MI-PDGAEAFKSKINENYKVTF--TA--PGVYGVKCTP 80 (122)
T ss_dssp SSEEEECTTEEEEEE--ESSS---------SCCCEECT--T-CS-CTTCCCCBCCTTCCEEEEE--CS--CEEEEEEETT
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEcc--c-cc-CCCcceeecCCCCEEEEEe--CC--CEEEEEEeCC
Confidence 357999999998876 4432 35554432 1 11 1111233457899987766 33 6899885432
Q ss_pred cCCCCCCCCeEEEEEEc
Q 013385 176 RGRKPATPPALTLLNYH 192 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~ 192 (444)
...-.+.|...
T Consensus 81 ------H~~M~G~I~V~ 91 (122)
T 2ux6_A 81 ------HPFMVGVVQVG 91 (122)
T ss_dssp ------EEEEEEEEEES
T ss_pred ------CccCEEEEEEe
Confidence 12245666654
No 141
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=66.01 E-value=4.5 Score=32.24 Aligned_cols=74 Identities=15% Similarity=0.266 Sum_probs=40.9
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEe
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 175 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~ 175 (444)
|..++|++|++++|. |.+. +|.+.+. ++ ..|-....+.+.+||++.+-+ ++ +|.|++.-..
T Consensus 20 P~~i~V~~GdtV~f~--n~~~---------~H~v~~~--~~--~~p~~~~~~~~~pG~t~~~tF--~~--~G~y~y~C~~ 80 (123)
T 1pmy_A 20 PALVRLKPGDSIKFL--PTDK---------GHNVETI--KG--MAPDGADYVKTTVGQEAVVKF--DK--EGVYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEE--CSSS---------SCCCEEC--TT--SSCTTCCCCBCCTTSCEEEEC--CS--CEEEEEECST
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEe--cc--cCCCCccceecCCCCEEEEEe--CC--CeEEEEEeCC
Confidence 357999999997764 4442 4655443 11 001111233457999887655 43 6899885432
Q ss_pred cCCCCCCCCeEEEEEEc
Q 013385 176 RGRKPATPPALTLLNYH 192 (444)
Q Consensus 176 ~~~~~~~~~~~ail~y~ 192 (444)
. ....-.+.|...
T Consensus 81 H----~~~gM~G~I~V~ 93 (123)
T 1pmy_A 81 H----YMMGMVALVVVG 93 (123)
T ss_dssp T----TTTTCEEEEEES
T ss_pred c----cccCCEEEEEEc
Confidence 1 112346666655
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=62.31 E-value=20 Score=33.14 Aligned_cols=70 Identities=19% Similarity=0.215 Sum_probs=49.7
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|++.+.+.+.+ |- |+|-+.| ...| +-||....+.|.++
T Consensus 191 lvlP~g~~V~~~ltS~DVi-------Hs-------f~iP~lg-----------------~k~d---aiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVI-------HA-------WTIPAFA-----------------VKQD---AVPGRIAQLWFSVD 236 (298)
T ss_dssp EEEESSSEEEEEEEESSSC-------EE-------EEEGGGT-----------------EEEE---ECTTCCEEEEEECS
T ss_pred EEEEcCCEEEEEEEeCCcc-------ce-------eeEcccC-----------------ceEE---ecCCceEEEEEEeC
Confidence 8899999999999997753 44 5554332 2233 34677788999999
Q ss_pred CceeeEEeccChh-hHhcccEEEEe
Q 013385 392 NPGAWAFHCHIEP-HFHIGMGVVLA 415 (444)
Q Consensus 392 npG~w~~HCHi~~-H~~~GM~~~~~ 415 (444)
.||.+...|.-.- .-...|-..+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~ 261 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVK 261 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEE
T ss_pred CCEEEEEEcccccCcCccCCeeEEE
Confidence 9999999999543 33345555553
No 143
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=58.12 E-value=13 Score=33.04 Aligned_cols=70 Identities=17% Similarity=0.263 Sum_probs=49.0
Q ss_pred EEEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEc
Q 013385 311 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 390 (444)
Q Consensus 311 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~a 390 (444)
.+.++.|+.|++.+.+.+.. | .|+|-+-| .+.| .-||..-.+.|.+
T Consensus 141 ~lvlP~~~~Vr~~vtS~DVi-------H-------sf~vP~lg-----------------~K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 141 RVVLPMEMTIRMLVSSEDVL-------H-------SWAVPSLG-----------------LKTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp CEEEETTSCEEEEEEESSSC-------E-------EEEEGGGT-----------------EEEE---ECTTCCEEEEECC
T ss_pred eEEEecCCEEEEEEEeCccc-------c-------eeeecccC-----------------cEEE---ecCCceEEEEEec
Confidence 38899999999999987753 4 45554432 2334 3457777889999
Q ss_pred CCceeeEEeccChhhHhc-ccEEEE
Q 013385 391 DNPGAWAFHCHIEPHFHI-GMGVVL 414 (444)
Q Consensus 391 dnpG~w~~HCHi~~H~~~-GM~~~~ 414 (444)
+.||.+...|.-.-.... -|-..+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v 211 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVL 211 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEE
T ss_pred CCcEEEEEEehhhcccccccCeEEE
Confidence 999999999986544433 344444
No 144
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=51.30 E-value=7 Score=31.19 Aligned_cols=59 Identities=17% Similarity=0.125 Sum_probs=36.0
Q ss_pred ceEEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEE
Q 013385 96 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 173 (444)
Q Consensus 96 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~ 173 (444)
|..++|++|++++|. |.+ ..|.+... |+. -|-....+.+.+|+.|.+-+ + .+|.|+..-
T Consensus 21 P~~i~V~~GDTV~f~--n~~---------~~Hnv~~~--~~~--~p~g~~~~~~~pg~t~s~TF--~--~~G~y~Y~C 79 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD---------KSHNAESV--REV--WPEGVAPVKGGFSKEVVFNA--E--KEGLYVLKC 79 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS---------SSCCCEEC--TTT--SCTTSCCCBCCTTCCEEEEC--C--SSEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECC---------CCccEEEe--CCc--CCCCccccccCCCCEEEEEe--C--CCeEEEEEc
Confidence 357999999998765 543 14554432 221 12222345567999988766 3 368998754
No 145
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=48.11 E-value=1e+02 Score=24.40 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=45.4
Q ss_pred EEcCCCeE--EEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEEecC
Q 013385 100 HVQPNKTY--RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 177 (444)
Q Consensus 100 ~v~~g~~~--RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~~~~ 177 (444)
.+++|+.+ +..+-|.|....-.+. ..++ +||..+.-. .+.|++|+.-.|-+.......|+|.|.+....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~-----V~ly-vng~~v~t~---~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTK-----VRVY-INGTLYKNW---TVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEE-----EEEE-ETTEEEEEE---EEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcE-----EEEE-ECCEEEeeE---EeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 45678776 5668898866432222 2222 367655332 34699999999888876655789999887643
No 146
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=43.56 E-value=10 Score=30.38 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=19.7
Q ss_pred EEEEcCCCeEEEEEEecCcceeEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLN 121 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~ 121 (444)
.|.|++||++||.+.|-+..+.|.
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F~ 95 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTFA 95 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEEC
T ss_pred EEEecCCCEEEEEeCCcEEEEEEe
Confidence 489999999999999987666553
No 147
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=36.32 E-value=46 Score=31.03 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=48.6
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|++.+...+.+ | .|+|-+.+ ...| +-||....+.|.++
T Consensus 153 l~lP~g~~V~~~lTS~DVi-------H-------sf~IP~lg-----------------~k~D---aiPGr~n~~~~~~~ 198 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNSVM-------N-------SFFIPRLG-----------------SQIY---AMAGMQTRLHLIAN 198 (315)
T ss_dssp CCCCSSSEEEEEECBSSSC-------E-------EEEEGGGT-----------------EEEE---ECBTSCEEEEEECC
T ss_pred EEEeCCCEEEEEEEeCCcc-------c-------eeeecccC-----------------cEEe---ecCCcceeeEEecC
Confidence 6789999999999887653 4 45554432 2233 34577778899999
Q ss_pred CceeeEEeccChhhHh-cccEEEEe
Q 013385 392 NPGAWAFHCHIEPHFH-IGMGVVLA 415 (444)
Q Consensus 392 npG~w~~HCHi~~H~~-~GM~~~~~ 415 (444)
.||.+...|--.-... ..|-..+.
T Consensus 199 ~~G~y~g~CsE~CG~~Hs~M~~~v~ 223 (315)
T 1fft_B 199 EPGTYDGISASYSGPGFSGMKFKAI 223 (315)
T ss_dssp SCBCCEEBCCSCCSTTTTTCCEECC
T ss_pred CCeEEEEeccccchhhHHhccceEE
Confidence 9999999998654333 34555553
No 148
>3f6z_B MLIC, putative uncharacterized protein; beta barrel, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; 2.50A {Pseudomonas aeruginosa}
Probab=27.86 E-value=1.8e+02 Score=21.89 Aligned_cols=46 Identities=11% Similarity=0.178 Sum_probs=31.5
Q ss_pred EEEEcCCCeEEEEEEecCcceeEEEEE-cCcceEEEEeCCccceeeEeeeEEecCCceEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 156 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via~DG~~v~p~~v~~~~i~~GeR~d 156 (444)
.+....|+.++.+++|........|.+ +|..+ ......-++|.||.
T Consensus 22 ~Y~C~~~~~v~v~y~~~~~~s~a~l~~~~g~~~-------------~L~~~~SASGaRY~ 68 (101)
T 3f6z_B 22 DYKCENGRKFTVQYLNKGDNSLAVVPVSDNSTL-------------VFSNVISASGAKYA 68 (101)
T ss_dssp EEEETTSCEEEEEEEEETTEEEEEEEEETTEEE-------------EEEEECCSSSEEEE
T ss_pred EEECCCCCEEEEEEeCCCCCcEEEEEECCCCEE-------------EEeEeeeCCcccEe
Confidence 567778889999999987544455666 54432 24455667888885
No 149
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=27.07 E-value=1.2e+02 Score=26.27 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=39.8
Q ss_pred EEEEcCCCeEEEEEEecCcceeEEEEEcCcceEEEEeCCccceeeEeeeEEecCCceEEEEEecCCCCCcceEEEEE
Q 013385 98 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 174 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~p~~v~~~~i~~GeR~dV~v~~~~~~~g~y~i~~~ 174 (444)
.+.+..|+.+||+|-+.... ..|.|....+++ ..-||..-.+-+.+++ +|.|+.+-.
T Consensus 42 ~l~lP~g~~V~~~lTS~DVi--HSF~IP~lgvK~----------------daiPGr~n~l~~~~~~--pG~y~g~Cs 98 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVM--HSFFIPRLGSQI----------------YAMAGMQTRLHLIANE--PGTYDGICA 98 (205)
T ss_dssp EEEEETTSCEEEEEEESSSC--EEEEEGGGTEEE----------------EECTTCCEEEEECCSS--SEEEEEEEC
T ss_pred eEEEeCCCEEEEEEecCCce--eeEEecccCcEE----------------EecCCceEEEEEEeCC--CeEEEEEcc
Confidence 68899999999999876543 456666554333 2336777777777775 789987654
No 150
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=21.64 E-value=73 Score=28.68 Aligned_cols=22 Identities=41% Similarity=0.530 Sum_probs=18.8
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 013385 95 APQILHVQPNKTYRLRIASTTA 116 (444)
Q Consensus 95 ~~~~~~v~~g~~~RlRliNa~~ 116 (444)
.|+.+++++|+...+||+..+.
T Consensus 83 tPPl~rl~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 83 TPAVTRVEPNGGAVLRIAYLKA 104 (257)
T ss_dssp ESSEEEECTTEEEEEEEEECCC
T ss_pred cCCEEEECCCCceEEEEEECCC
Confidence 3578999999999999998764
No 151
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=21.07 E-value=3.9e+02 Score=22.80 Aligned_cols=58 Identities=10% Similarity=0.109 Sum_probs=32.2
Q ss_pred EEEEcCCCeEEEEEEecC-cceeEEEEEcCcceEEEEeCCccceeeEee---eEEecC--CceEEEEEecCC
Q 013385 98 ILHVQPNKTYRLRIASTT-ALASLNLAVKNHKMVVVEADGNYVQPFEVD---DMDIYS--GESYSVLLTTNQ 163 (444)
Q Consensus 98 ~~~v~~g~~~RlRliNa~-~~~~~~~~i~~h~~~via~DG~~v~p~~v~---~~~i~~--GeR~dV~v~~~~ 163 (444)
-+.+++|++|+|.|-=-+ ..+.+.+.| ..+|.+-..+.-+ .+.|.. -|+|++.+++..
T Consensus 97 gi~L~~G~tY~lSFdAkA~~~r~i~v~i--------~~~~~~y~~Y~~~~~~~i~ltt~e~q~yt~~FT~~~ 160 (205)
T 3p6b_A 97 GITLEQGHTYTVRFTIWSDKSCRVYAKI--------GQMGEPYTEYWNNNWNPFNLTPGQKLTVEQNFTMNY 160 (205)
T ss_dssp EEEECTTCEEEEEEEEEESSCEEEEEEE--------EESSTTCCEEESSTTCCEEEBTTEEEEEEEEEECCS
T ss_pred CEEecCCCEEEEEEEEEeCCCceEEEEE--------ecCCCCcceeccCccceEEecCCCCEEEEEEEEeCC
Confidence 467888899988764322 234443333 3334332233333 577754 467777777753
No 152
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=21.07 E-value=1.3e+02 Score=26.21 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=18.8
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 013385 95 APQILHVQPNKTYRLRIASTTA 116 (444)
Q Consensus 95 ~~~~~~v~~g~~~RlRliNa~~ 116 (444)
.|+.+++++|+...|||+..+.
T Consensus 64 tPPl~Rl~p~~~q~lRI~~~~~ 85 (218)
T 4ay0_A 64 TPPLFRLDAKQQNSLRIAQAGG 85 (218)
T ss_dssp ESSEEEECTTCEEEEEEEECSC
T ss_pred CCCeEEeCCCCceEEEEEecCC
Confidence 3568999999999999998764
No 153
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=25.08 E-value=23 Score=33.49 Aligned_cols=64 Identities=22% Similarity=0.372 Sum_probs=46.4
Q ss_pred EEccCCCEEEEEEEeCCcCCCCCCCCCceeecccceEEEeecCCCCCchhhcccCCCCCCccceEEeCCCcEEEEEEEcC
Q 013385 312 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 391 (444)
Q Consensus 312 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~v~irf~ad 391 (444)
+.++.|+.|++.+.+.+.+ | .|+|-+.+ .+.|. -||....+.|.++
T Consensus 143 l~~P~~~~v~~~~ts~DVi-------H-------sf~vp~~~-----------------~k~d~---~PG~~~~~~~~~~ 188 (337)
T 2yev_B 143 LVLPAGVPVELEITSKDVI-------H-------SFWVPGLA-----------------GKRDA---IPGQTTRISFEPK 188 (337)
Confidence 7899999999999876643 3 46665543 33443 3466778889999
Q ss_pred CceeeEEeccChhhHhcc
Q 013385 392 NPGAWAFHCHIEPHFHIG 409 (444)
Q Consensus 392 npG~w~~HCHi~~H~~~G 409 (444)
.||.+...|--.--...+
T Consensus 189 ~~G~y~g~c~e~cG~~Hs 206 (337)
T 2yev_B 189 EPGLYYGFCAELCGASHA 206 (337)
Confidence 999999999875544333
Done!