Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>013386
MDNSGNPQDSVVPPVEGVAGGGTAYGWNDNCSQSSGPLNGSINPTEIPTADLVHVWCMPS
TANVGPQEMPRPLEPINLLAARNERESVQIALRPKVSWSSSSTAGVVQVQCSDLCSASGD
RLVVGQSLMLRRVVPMLGVPDALVPLDLPVCQISLIPGETTAVWVSIDAPYAQPPGLYEG
EIIITSKADTELSSQCLGKGEKHRLFMELRNCLDNVEPIEGKPLHEVVERAKSTATTLRR
VIFSPLFSEFFSDNGPIDMMDEDAISNLSVRVKLSLTVWDFILPATPSLPAVIGISDTVI
EDRFGVRHGSDEWYEALDQHFKWLLQYRISPFFCRWGESMRVLTYTCPWPADHPKSDEYF
SDPRLAAYAVPYSPVLSSNDGAKDYVRKEIELLRTKAHWKKAYFYLWDEPLNMEHYSSVR
NMASELHAYAPDARVLTTYYCGIV

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013386
        (444 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028275 - symbol:AT1G45150 "AT1G45150" species...  1633  6.6e-168  1


>TAIR|locus:2028275 [details] [associations]
            symbol:AT1G45150 "AT1G45150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:BT008320 EMBL:AK227318
            IPI:IPI00523041 RefSeq:NP_175129.3 UniGene:At.38729 PaxDb:Q7Y231
            PRIDE:Q7Y231 ProMEX:Q7Y231 EnsemblPlants:AT1G45150.1 GeneID:841083
            KEGG:ath:AT1G45150 TAIR:At1g45150 eggNOG:NOG119415
            HOGENOM:HOG000005660 InParanoid:Q7Y231 OMA:ENGEEWW PhylomeDB:Q7Y231
            ProtClustDB:CLSN2680742 Genevestigator:Q7Y231 InterPro:IPR025150
            Pfam:PF13320 Uniprot:Q7Y231
        Length = 643

 Score = 1633 (579.9 bits), Expect = 6.6e-168, P = 6.6e-168
 Identities = 301/421 (71%), Positives = 355/421 (84%)

Query:    23 TAYGWNDNCSQSSGPLNGSINPTEIPTADLVHVWCMPSTANVGPQEMPRPLEPINLLAAR 82
             TAYG+ND     + PL  S +P+E+PTADLV+VWCMP+T NVG QE PR LEPINLLAAR
Sbjct:    21 TAYGFND-----AEPLKQSTDPSEVPTADLVNVWCMPNTVNVGSQETPRALEPINLLAAR 75

Query:    83 NERESVQIALRPKVSWSSSSTAGVVQVQCSDLCSASGDRLVVGQSLMLRRVVPMLGVPDA 142
             NERES QIA+RPKVSW++SS +G+VQVQCSDLCS++GDRLVVGQSL LRRVVP+LGVPDA
Sbjct:    76 NERESFQIAMRPKVSWAASSPSGIVQVQCSDLCSSAGDRLVVGQSLKLRRVVPVLGVPDA 135

Query:   143 LVPLDLPVCQISLIPGETTAVWVSIDAPYAQPPGLYEGEIIITS-KADTELSSQCLGKGE 201
             LVPLDLPV Q+SL PGET+ +WVSID P  QPPG YEGEIII++ K D   SS  L K E
Sbjct:   136 LVPLDLPVSQLSLFPGETSVIWVSIDVPTGQPPGQYEGEIIISAMKTDGGGSSH-LAKHE 194

Query:   202 KHRLFMELRNCLDNVEPIEGKPLHEVVERAKSTATTLRRVIFSPLFSEFFSDNGPIDMMD 261
             K +L +EL  CLD +EPIEGKP+ EVVER K  +++LRR++FSP FSEF S NG  DMM+
Sbjct:   195 KDQLCVELNTCLDIMEPIEGKPMDEVVERIKCASSSLRRILFSPSFSEFISTNGSTDMME 254

Query:   262 EDAISNLSVRVKLSLTVWDFILPATPSLPAVIGISDTVIEDRFGVRHGSDEWYEALDQHF 321
             ED +SNLS+R+KL LTVW+FI+P TPSLPAVIG+SDTVIEDRF V HGS++WY+ LD HF
Sbjct:   255 EDVVSNLSLRIKLRLTVWEFIIPVTPSLPAVIGVSDTVIEDRFAVEHGSEDWYKKLDLHF 314

Query:   322 KWLLQYRISPFFCRWGESMRVLTYTCPWPADHPKSDEYFSDPRLAAYAVPYSPVLSSNDG 381
             KWLLQYRISP+FC+WGESMRVLTYT PWPADHPKSDEY SD RLAAYAVPY  V++ +D 
Sbjct:   315 KWLLQYRISPYFCKWGESMRVLTYTSPWPADHPKSDEYLSDSRLAAYAVPYRQVIAGDDS 374

Query:   382 AKDYVRKEIELLRTKAHWKKAYFYLWDEPLNMEHYSSVRNMASELHAYAPDARVLTTYYC 441
              + Y+RKE+E+LR+K HW KAYFYLWDEPLNMEH+ +VR MASE++AYAPD+RVLTTYYC
Sbjct:   375 RESYLRKEVEILRSKPHWNKAYFYLWDEPLNMEHFDNVRKMASEIYAYAPDSRVLTTYYC 434

Query:   442 G 442
             G
Sbjct:   435 G 435


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      444       432   0.00086  118 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  307 KB (2157 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.13u 0.10s 34.23t   Elapsed:  00:00:02
  Total cpu time:  34.13u 0.10s 34.23t   Elapsed:  00:00:02
  Start:  Fri May 10 15:39:11 2013   End:  Fri May 10 15:39:13 2013

Back to top