Query 013387
Match_columns 444
No_of_seqs 222 out of 1103
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 03:20:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013387.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013387hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2493 Na+/Pi symporter [Inor 100.0 1.3E-76 2.9E-81 608.1 14.6 350 10-438 155-508 (512)
2 PF01384 PHO4: Phosphate trans 100.0 4.1E-49 8.9E-54 398.6 14.6 154 268-428 172-326 (326)
3 COG0306 PitA Phosphate/sulphat 100.0 2.7E-45 5.9E-50 369.0 15.1 155 267-437 170-324 (326)
4 COG0306 PitA Phosphate/sulphat 99.9 1.5E-23 3.2E-28 211.7 11.6 148 272-437 5-159 (326)
5 PF01384 PHO4: Phosphate trans 99.9 1.2E-21 2.7E-26 198.6 9.2 135 286-438 1-147 (326)
6 KOG2493 Na+/Pi symporter [Inor 99.8 1.1E-19 2.5E-24 188.3 10.3 148 273-438 29-186 (512)
7 PF01102 Glycophorin_A: Glycop 36.6 24 0.00052 31.6 2.0 33 84-116 60-93 (122)
8 PF14150 YesK: YesK-like prote 30.1 70 0.0015 26.7 3.6 36 41-76 17-53 (81)
9 PF00893 Multi_Drug_Res: Small 28.7 1.1E+02 0.0025 25.4 4.8 61 325-391 3-63 (93)
10 PRK10650 multidrug efflux syst 28.0 95 0.0021 27.1 4.3 85 323-413 7-96 (109)
11 COG3402 Uncharacterized conser 25.1 1.3E+02 0.0029 28.2 4.9 62 48-115 15-77 (161)
12 PRK09541 emrE multidrug efflux 22.3 1.5E+02 0.0032 25.9 4.4 81 327-413 6-91 (110)
13 PF06570 DUF1129: Protein of u 22.0 2.6E+02 0.0057 26.6 6.5 20 25-44 117-136 (206)
14 PF09578 Spore_YabQ: Spore cor 22.0 3.6E+02 0.0078 21.9 6.4 57 22-80 2-59 (80)
15 PF10966 DUF2768: Protein of u 21.4 2.8E+02 0.0061 21.8 5.3 31 46-76 27-58 (58)
16 PF10779 XhlA: Haemolysin XhlA 20.2 1E+02 0.0022 24.6 2.7 21 415-435 50-70 (71)
17 COG1283 NptA Na+/phosphate sym 20.1 2E+02 0.0043 32.0 5.8 104 325-435 6-125 (533)
No 1
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-76 Score=608.08 Aligned_cols=350 Identities=19% Similarity=0.351 Sum_probs=269.8
Q ss_pred CCceeeeeeeeehhhhhHHHHHHHHHHHHHhhhhccCCHHHHHHHHhhHHHHHHhhhhhhheeeecCCcccccCchhhhh
Q 013387 10 GGGLLWIFLEWTVAPLFACMCACFLFILLKVLILRHKNARERILIFFPVDYGLSAGLLCLFLVYRVRGHLVHIPRWVTIA 89 (444)
Q Consensus 10 ~~gv~~Iv~SW~ISPllsG~~s~~lF~~ir~~VLrr~np~~~al~~lPi~~~~t~~i~~~~Iv~kG~~~~l~~~~~~~~~ 89 (444)
|..+.+|++||||||+++|+++.++|.++|++|||++||++++++.+|++|++|+++|+|.|+|||+|. |++|++|.|.
T Consensus 155 w~~v~~iv~swfiSpilsg~~s~ilf~~v~~svl~~~~p~~~gl~~lp~~y~~~~~~n~f~ivy~Gs~~-l~~d~l~~~~ 233 (512)
T KOG2493|consen 155 WMEVIKIVASWFISPILSGIISAILFFLVDHSVLRAANPVKNGLRLLPVFYFITVSINVFGIVYDGSKV-LGLDSLPLWA 233 (512)
T ss_pred ehhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCchhhchhhcchhhhhhhhheeeeEEecCcce-eeeccchHHH
Confidence 357999999999999999999999999999999999999999999999999999999999999999999 8889999999
Q ss_pred HHHHHHHHHH---HHHhhheechhhhhhccccccccccccCCCCccccccccccccccCCCCCCCchhHHHHHHHHhhhc
Q 013387 90 AVALATFIGA---VLPLVVIVPLATKELGATEKHKTAKNNNMNSTKEQCVEIQDQTCSNNTKGRDDEAEDVLREFMQRRV 166 (444)
Q Consensus 90 ~~~is~~vg~---~l~~~~~vP~l~rri~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 166 (444)
+++++.++|+ ++.++|+-||+|||+.+.+ .+... ++.++. +++. ..++..+..
T Consensus 234 ~~~is~~~g~i~a~i~~f~v~p~~~~ki~~~k-~~~~~---~~~~~~-----~~~s-~~~~~~~~~-------------- 289 (512)
T KOG2493|consen 234 TILISVGLGVIAAFIVYFFVRPFMRRKINRGK-ETDEA---PPVSEV-----SGSS-ARRELGKSV-------------- 289 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhccccc-ccccC---CCccch-----hccc-ccccccccc--------------
Confidence 9999999998 7777888899999997422 00000 000000 0000 000000000
Q ss_pred ccchhhhhhhccCCCCCCCCCCcchhhhcccCCchhhhhccccCCCCcccccccccccCCCccchhhhhhhhhccccccc
Q 013387 167 LDTVYEEEERNSCASPDSTIKDSDQQLALSTGQSTQFKHLLQCTPNNLVQTKTFHKTENQSPFQSAYNFVRNFTKSTVSP 246 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 246 (444)
..++++.. +...+... ..+.....+ .+.+...| ++. +++..+- -|
T Consensus 290 --~i~~~~~~------e~~~~~~~--~~~t~~~~~-------~P~~~~~q-gk~----------------~~~~~~l-~p 334 (512)
T KOG2493|consen 290 --EIKEESAV------ESTVKNLR--IQNTSAITK-------SPSTSESQ-GKI----------------RKLEKWL-WP 334 (512)
T ss_pred --chhccccc------cccccchh--hcchhhccC-------CCCCcccc-Ccc----------------chhheee-cC
Confidence 00000000 00000000 000000000 00000000 110 0110010 11
Q ss_pred ceecccchhHhhhhhccCc-hhhhhhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhcccccCCCCCCCccchhH
Q 013387 247 VIEYDRNTLIRHALAEKYD-EIEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSW 325 (444)
Q Consensus 247 d~~~~~~~~~~h~~~~~~~-~~e~~f~~lqv~sa~~~af~hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~~~~~~p~ 325 (444)
|. + |..+ ++.++|+++|++|||+++|+||+|||+|++||++++|.+|++|. +.++.++|+
T Consensus 335 ~~----~--------r~d~e~v~~lFs~lQvlTACF~sFAHGaNDVsNAIgPL~Al~~iy~~g~-------v~~k~~~Pi 395 (512)
T KOG2493|consen 335 DV----T--------RVDSEEVSRLFSTLQVLTACFASFAHGANDVSNAIGPLVALYLIYRTGY-------VEQKEETPI 395 (512)
T ss_pred CC----C--------cccHHHHHHHHHHHHHHHHHHhhhcccccchhhhhHHHHHHHHHHHcCC-------ccceeccce
Confidence 10 0 0112 39999999999999999999999999999999999999999997 788999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeCCCccc
Q 013387 326 WFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNV 405 (444)
Q Consensus 326 wil~~g~~~i~~G~~~~G~rVi~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~~~~~V 405 (444)
|+|++|+++|++|+|++|+|||||+|+||++++|++|||+|+++|+|+++||++|||+|||||.||||++||++++.++|
T Consensus 396 ~vLlyG~~aicvGlw~~G~rVIkTvG~kmt~itPasGFsIEfgaA~TvLiAsklGlPiStThc~VGsVvaVG~~rs~~~V 475 (512)
T KOG2493|consen 396 YVLLYGGFAICVGLWTLGHRVIKTVGKKMTEITPASGFSIEFGAAITVLIASKLGLPISTTHCLVGSVVAVGLARSLKGV 475 (512)
T ss_pred eeeecccceeeeeehhhhHHHHHHHhhcccccCCCccceeeHHHHHHHHHHHhcCCCcccceeeeeeEEEEEEeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC
Q 013387 406 NWKLLFKFICGWVMTIIFCCGAAFAIFYASVHA 438 (444)
Q Consensus 406 nw~~~~~I~~~Wi~T~p~a~~is~~l~~~~~~a 438 (444)
+|+++|+|+++|++|+|++|++|+++++++.++
T Consensus 476 ~w~~fR~I~~sW~vTlPvsglisa~~m~Il~~~ 508 (512)
T KOG2493|consen 476 DWRTFRNIFFSWFVTLPVSGLISAGIMWILQYA 508 (512)
T ss_pred chHHHHHhHhhheeecchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876
No 2
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=100.00 E-value=4.1e-49 Score=398.59 Aligned_cols=154 Identities=34% Similarity=0.695 Sum_probs=146.0
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhcccccCCCCCC-CccchhHHHHHHHHHHHHHHHhhccchh
Q 013387 268 EDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDV-DSIDVSWWFRALGGLGAVMGFILCGWKL 346 (444)
Q Consensus 268 e~~f~~lqv~sa~~~af~hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~-~~~~~p~wil~~g~~~i~~G~~~~G~rV 346 (444)
|+.|+++|++++|++||+||+||+||++||+++++.+|.+|. .. ++.++|+|++++|++++++|++++||||
T Consensus 172 ~~~~~~l~i~sa~~~sfahGaND~~naig~~~~~~~~~~~g~-------~~~~~~~~p~~~~~~~~~~i~~G~~~~G~rv 244 (326)
T PF01384_consen 172 EKIFRFLQILSAAFVSFAHGANDVANAIGPLAAILIIYNTGS-------VNSGKAEIPWWILLLGGLAIALGTLTGGWRV 244 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC-------cccccccChHHHHHHHHHHHHHHHHHhhHHH
Confidence 356889999999999999999999999999999999988774 32 2467899999999999999999999999
Q ss_pred HhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeCCCcccchHHHHHHHHHHhhhHHHHHH
Q 013387 347 TQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCG 426 (444)
Q Consensus 347 i~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~~~~~Vnw~~~~~I~~~Wi~T~p~a~~ 426 (444)
|||+|+||++++|.|||++|++++++++++|.+|+|||||||++||++|+|++++.+.|||+++++|+++|++|+|+|++
T Consensus 245 ~~tvG~~it~l~p~~g~~a~l~sa~~v~~as~~GlPvStT~~~vgaivGvG~~~~~~~V~w~~~~~I~~~Wi~T~p~a~~ 324 (326)
T PF01384_consen 245 IRTVGEKITKLDPSRGFSAQLSSALTVLIASLLGLPVSTTHAIVGAIVGVGLARGFRSVNWKTVRKIVLGWILTLPIAAL 324 (326)
T ss_pred HHHhccchhccCcchhHHHHHHHHHHHHHHHhcCCCcchhheeeeeeEeeeeecCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HH
Q 013387 427 AA 428 (444)
Q Consensus 427 is 428 (444)
+|
T Consensus 325 ~S 326 (326)
T PF01384_consen 325 LS 326 (326)
T ss_pred hC
Confidence 75
No 3
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=368.95 Aligned_cols=155 Identities=27% Similarity=0.536 Sum_probs=146.0
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhcccccCCCCCCCccchhHHHHHHHHHHHHHHHhhccchh
Q 013387 267 IEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKL 346 (444)
Q Consensus 267 ~e~~f~~lqv~sa~~~af~hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rV 346 (444)
+|++||++|+++||++||+||+||+||++||++++.. . ...|.|++++|++++++|++++|+||
T Consensus 170 ~~~~~r~l~i~sa~~~aF~hGaNdvanaiGpi~~~~~----~------------~~~~~~v~~~g~~~i~lG~~~~g~Rv 233 (326)
T COG0306 170 VERIFRILLIISASLVAFAHGANDVANAIGPLVAVLI----S------------SLPPFWVLVLGGIALALGTLTGGPRV 233 (326)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHh----h------------ccccHHHHHHHHHHHHHHHHHccHHH
Confidence 4567999999999999999999999999999998753 0 14589999999999999999999999
Q ss_pred HhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeCCCcccchHHHHHHHHHHhhhHHHHHH
Q 013387 347 TQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCG 426 (444)
Q Consensus 347 i~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~~~~~Vnw~~~~~I~~~Wi~T~p~a~~ 426 (444)
|||+|+||++|+|.||||+|+++|+++.+||.+|+||||||+++|||+|+|++.+.+.|||+++++|+.+|++|+|++++
T Consensus 234 i~TvG~kIt~L~p~~gfsA~~~sa~~v~~as~~GlPvStT~~~vgaI~GvG~~~~~~~v~~~~~~~Iv~aWvvT~p~a~~ 313 (326)
T COG0306 234 IETVGKKITELTPSRGFSAQLSSAITVLLASLLGLPVSTTHTLVGAVLGVGLALAGGAVNWKVIKNIVLAWVVTLPAAAL 313 (326)
T ss_pred HHHHhhhhcccCcchhHHHHHHHHHHHHHHHHcCCCcccceeeeeeeeecchhhccCceeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877899999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 013387 427 AAFAIFYASVH 437 (444)
Q Consensus 427 is~~l~~~~~~ 437 (444)
+|+++|+++..
T Consensus 314 ls~~~~~~~~~ 324 (326)
T COG0306 314 LSALLYWLLLF 324 (326)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 4
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.5e-23 Score=211.71 Aligned_cols=148 Identities=23% Similarity=0.339 Sum_probs=131.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhcccccCCCCCCCccchhHHHHHHHHHHHHHHHhhccchhHhhhc
Q 013387 272 SVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLG 351 (444)
Q Consensus 272 ~~lqv~sa~~~af~hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TvG 351 (444)
-.+-++.+.+++|+.|+||++|+|||.+ +++ .-.+..++++.+++..+|.++.|.||++|++
T Consensus 5 ~~~~li~~l~~a~~iGand~ana~gtaV------gs~------------alt~~~Av~laavf~f~Ga~l~g~~V~~TI~ 66 (326)
T COG0306 5 LVLALIAALFFAFNIGANDTANAVGTAV------GSG------------ALTPRQAVLLAAVFNFLGALLGGGNVAETIG 66 (326)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhhhh------ccC------------CccHHHHHHHHHHHHHHHHHHcCccHHHHHh
Confidence 3566788999999999999999999986 333 2347789999999999999999999999999
Q ss_pred ccccc-------ccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeCCCcccchHHHHHHHHHHhhhHHHH
Q 013387 352 GKLTY-------MSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFC 424 (444)
Q Consensus 352 ~~it~-------l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~~~~~Vnw~~~~~I~~~Wi~T~p~a 424 (444)
++|++ +.|.--+++.+++++|+++++++|+|+||||+++||++|+|++.+...++|+.+.+|+.+|+++|.++
T Consensus 67 ~~iv~~~~~~~~~~~~~~~aaLlaa~~w~~ia~~~GiP~StshaiiGaiiG~gla~~~~~~~~~~~~~Iv~swvlsPii~ 146 (326)
T COG0306 67 SGIVDPGLLNDSLTPAGVLAALLAAILWNLIATYLGIPVSTSHALIGAIIGAGLALGGGVVDWGVLGKIVASWVLSPILG 146 (326)
T ss_pred cCCCCchhccchhhHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHH
Confidence 99998 23455699999999999999999999999999999999999997433699999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 013387 425 CGAAFAIFYASVH 437 (444)
Q Consensus 425 ~~is~~l~~~~~~ 437 (444)
+++++++|..++.
T Consensus 147 ~~ia~~l~~~~~~ 159 (326)
T COG0306 147 GVLAYLLYSLLRR 159 (326)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987754
No 5
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=99.85 E-value=1.2e-21 Score=198.57 Aligned_cols=135 Identities=24% Similarity=0.365 Sum_probs=121.4
Q ss_pred hhhhhhhhHHHHHHHHHHHHhhcccccCCCCCCCccchhHHHHHHHHHHHHHHHhhccchhHhhhccccccccCch----
Q 013387 286 QSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSR---- 361 (444)
Q Consensus 286 hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TvG~~it~l~p~~---- 361 (444)
.|+||++|++|+.+ +++ .-.+..++++++++..+|.++.|.+|++|++++|++.+...
T Consensus 1 ~GaND~an~~gt~V------gs~------------al~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~ 62 (326)
T PF01384_consen 1 NGANDAANSFGTAV------GSR------------ALTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDP 62 (326)
T ss_pred CCccchHHHHHHHH------hcC------------ccCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccc
Confidence 49999999999886 333 34478899999999999999999999999999999865443
Q ss_pred ------hHHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeC-CCcccchH-HHHHHHHHHhhhHHHHHHHHHHHHH
Q 013387 362 ------GLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIAD-DIQNVNWK-LLFKFICGWVMTIIFCCGAAFAIFY 433 (444)
Q Consensus 362 ------gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~-~~~~Vnw~-~~~~I~~~Wi~T~p~a~~is~~l~~ 433 (444)
-+++.+++++|+++++++|+|+||||+++|+++|+|++. +.+.+||. .+.+|+.+|+++|.+++++|+++|.
T Consensus 63 ~~~~~~~~~al~~a~iw~~i~t~~glPvStThalvGal~G~~l~~~g~~~v~w~~~~~~I~~~wv~sPlia~~~a~~l~~ 142 (326)
T PF01384_consen 63 QILMIGMLAALLAAAIWLLIATWLGLPVSTTHALVGALIGAGLASGGFSAVNWSKGLLKIVLSWVISPLIAFILAYILYR 142 (326)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999999999999999999999998 67899999 6999999999999999999999998
Q ss_pred HHhhC
Q 013387 434 ASVHA 438 (444)
Q Consensus 434 ~~~~a 438 (444)
++++-
T Consensus 143 ~~~~~ 147 (326)
T PF01384_consen 143 LIRRI 147 (326)
T ss_pred HHHHH
Confidence 77653
No 6
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=1.1e-19 Score=188.28 Aligned_cols=148 Identities=18% Similarity=0.320 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhcccccCCCCCCCccchhHHHHHHHHHHHHHHHhhccchhHhhhcc
Q 013387 273 VPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGG 352 (444)
Q Consensus 273 ~lqv~sa~~~af~hGaNDvana~gp~~~i~~i~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TvG~ 352 (444)
.++.+.|.+.+|+.||||+||+.|+-+ ++| ...-..+.++++++..+|..+.|++|.+|+.+
T Consensus 29 ivg~i~afll~f~mGANDvaNsfgtSV------gSg------------vltl~QA~iLAsife~lGsvl~G~~V~dt~r~ 90 (512)
T KOG2493|consen 29 IVGFIVAFLLAFGMGANDVANSFGTSV------GSG------------VLTLKQAYILASIFETLGSVLLGASVTDTMRK 90 (512)
T ss_pred HHHHHHHHHHhcccCcccccccccccc------ccC------------ceehHHHHHHHHHHHHHHHHHccchhhhhHHh
Confidence 667788999999999999999999765 233 23345688999999999999999999999999
Q ss_pred ccccccCch--------h-HHHhHHHHHHHHHHHhcCCCccccchhhhceeeeeeeC-CCcccchHHHHHHHHHHhhhHH
Q 013387 353 KLTYMSNSR--------G-LASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIAD-DIQNVNWKLLFKFICGWVMTII 422 (444)
Q Consensus 353 ~it~l~p~~--------g-f~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG~~~-~~~~Vnw~~~~~I~~~Wi~T~p 422 (444)
++++.+-+. | .++..+++.|.++|+-+++|||||||+||+.+|.+++- |.+++.|..+.+|+.+|+++|.
T Consensus 91 gVId~s~y~~~~~~lmlgqva~L~G~a~W~l~At~~~~PvSttHsiVgatigfs~~~~g~~Gi~w~~v~~iv~swfiSpi 170 (512)
T KOG2493|consen 91 GVIDFSIYNDTPKTLMLGQVAALFGSAAWLLVATFLKLPVSTTHSIVGATIGFSLVARGFNGIVWMEVIKIVASWFISPI 170 (512)
T ss_pred ceeehHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHHcCCccceeeeeeheeeeeeeeccccceeehhhHHHHHHHhhhHH
Confidence 999754332 2 67888899999999999999999999999999999886 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC
Q 013387 423 FCCGAAFAIFYASVHA 438 (444)
Q Consensus 423 ~a~~is~~l~~~~~~a 438 (444)
+++.+++++|.++.++
T Consensus 171 lsg~~s~ilf~~v~~s 186 (512)
T KOG2493|consen 171 LSGIISAILFFLVDHS 186 (512)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988753
No 7
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.62 E-value=24 Score=31.62 Aligned_cols=33 Identities=15% Similarity=0.310 Sum_probs=20.1
Q ss_pred chhhhhHHHHHHHHHH-HHHhhheechhhhhhcc
Q 013387 84 RWVTIAAVALATFIGA-VLPLVVIVPLATKELGA 116 (444)
Q Consensus 84 ~~~~~~~~~is~~vg~-~l~~~~~vP~l~rri~~ 116 (444)
+++...+.+|++|+.+ ++..++++-|+-||..|
T Consensus 60 ~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~K 93 (122)
T PF01102_consen 60 RFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRK 93 (122)
T ss_dssp SSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred CccccceeehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6777788888888877 44444445665555543
No 8
>PF14150 YesK: YesK-like protein
Probab=30.06 E-value=70 Score=26.74 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=28.0
Q ss_pred hhhccCCHHHHHHHHhh-HHHHHHhhhhhhheeeecC
Q 013387 41 LILRHKNARERILIFFP-VDYGLSAGLLCLFLVYRVR 76 (444)
Q Consensus 41 ~VLrr~np~~~al~~lP-i~~~~t~~i~~~~Iv~kG~ 76 (444)
..+|+++|-|..-+.+| ++..++++...+++++=|.
T Consensus 17 ~~lr~r~p~k~~~~il~~ililis~~~v~~S~f~vGG 53 (81)
T PF14150_consen 17 VLLRKRFPKKQPEIILPLILILISLLTVLISIFLVGG 53 (81)
T ss_pred HHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHheEcc
Confidence 57889999999999999 6666677777777665444
No 9
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=28.66 E-value=1.1e+02 Score=25.35 Aligned_cols=61 Identities=20% Similarity=0.132 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHhhccchhHhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhh
Q 013387 325 WWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG 391 (444)
Q Consensus 325 ~wil~~g~~~i~~G~~~~G~rVi~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivG 391 (444)
+..++++++..+.|....-+ .++.++..|.-+...-.+.+...+....-.+|+|...++-.
T Consensus 3 wl~L~~a~~~ev~~~~~lK~------s~g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~ 63 (93)
T PF00893_consen 3 WLFLLLAILFEVVGTIALKA------SHGFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWT 63 (93)
T ss_dssp -HHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHhhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 44667777777888776644 55666777777777666777777777777899999988743
No 10
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=28.01 E-value=95 Score=27.11 Aligned_cols=85 Identities=12% Similarity=0.008 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhHhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhce--eeeeeeC
Q 013387 323 VSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSL--VGVGIAD 400 (444)
Q Consensus 323 ~p~wil~~g~~~i~~G~~~~G~rVi~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGav--vGvG~~~ 400 (444)
.++..+++++++.+.|+...- ..++.++.-|+-...+-.+.+...+.-+.-.+|+|++.++=.++ +|+-+..
T Consensus 7 ~~~~~L~~Ai~~Ev~~t~~Lk------~s~gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig 80 (109)
T PRK10650 7 IHAAWLALAIVLEIVANIFLK------FSDGFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAG 80 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HhcCCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 455577888889999987663 23556677776666666666666666666799999999975443 2222222
Q ss_pred ---CCcccchHHHHHH
Q 013387 401 ---DIQNVNWKLLFKF 413 (444)
Q Consensus 401 ---~~~~Vnw~~~~~I 413 (444)
-.+.++|..+.-|
T Consensus 81 ~~~f~e~~~~~~~~gi 96 (109)
T PRK10650 81 WILFGQRLNRKGWIGL 96 (109)
T ss_pred HHHcCCCCCHHHHHHH
Confidence 2256666654443
No 11
>COG3402 Uncharacterized conserved protein [Function unknown]
Probab=25.12 E-value=1.3e+02 Score=28.18 Aligned_cols=62 Identities=24% Similarity=0.404 Sum_probs=36.7
Q ss_pred HHHHHHHHhhHHHHHHhhhhhhheeeecCCcccccCchhhhhHHHHHHHHHHHHHhhheec-hhhhhhc
Q 013387 48 ARERILIFFPVDYGLSAGLLCLFLVYRVRGHLVHIPRWVTIAAVALATFIGAVLPLVVIVP-LATKELG 115 (444)
Q Consensus 48 p~~~al~~lPi~~~~t~~i~~~~Iv~kG~~~~l~~~~~~~~~~~~is~~vg~~l~~~~~vP-~l~rri~ 115 (444)
++.|-++.+|+..++...++...+.|--... +.|+.+.++.+ +.++ ++..+|++| .+|.|..
T Consensus 15 ~vw~~~~~i~~~l~Ll~av~~~~~~~~~~~~----~~w~~~a~~av-~l~~-~vv~l~iiP~~~Ryr~w 77 (161)
T COG3402 15 TVWRVQEWIPIALVLLIAVAAGVLLYFVGLD----PNWSSVAAVAV-ILLA-AVVTLFIIPQLVRYRVW 77 (161)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheeccC----CccHHHHHHHH-HHHH-HHHHhhhhhHHHhhhhh
Confidence 4556678888888888888887776654322 23443322222 2222 455677799 4666654
No 12
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=22.27 E-value=1.5e+02 Score=25.87 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhhccchhHhhhccccccccCchhHHHhHHHHHHHHHHHhcCCCccccchhhh--ceeeeeeeC---C
Q 013387 327 FRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG--SLVGVGIAD---D 401 (444)
Q Consensus 327 il~~g~~~i~~G~~~~G~rVi~TvG~~it~l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivG--avvGvG~~~---~ 401 (444)
.+++++++.++|+...- ..++.++.-|+-...+-.+.+...+.-..-.+|+|..+++=. +++|+-+.. =
T Consensus 6 ~L~~a~~~Ev~~~~~lK------~s~gf~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f 79 (110)
T PRK09541 6 YLGGAILAEVIGTTLMK------FSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF 79 (110)
T ss_pred HHHHHHHHHHHHHHHHH------HhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 56677788888887552 225566777776666777777776666677899999999843 333332222 2
Q ss_pred CcccchHHHHHH
Q 013387 402 IQNVNWKLLFKF 413 (444)
Q Consensus 402 ~~~Vnw~~~~~I 413 (444)
.+..||..+.-|
T Consensus 80 ~e~~~~~~~~gi 91 (110)
T PRK09541 80 GQRLDLPAIIGM 91 (110)
T ss_pred CCCCCHHHHHHH
Confidence 256676655444
No 13
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.01 E-value=2.6e+02 Score=26.61 Aligned_cols=20 Identities=10% Similarity=0.318 Sum_probs=10.0
Q ss_pred hhHHHHHHHHHHHHHhhhhc
Q 013387 25 LFACMCACFLFILLKVLILR 44 (444)
Q Consensus 25 llsG~~s~~lF~~ir~~VLr 44 (444)
++.++++.++|..+-+.+-+
T Consensus 117 i~~~i~~G~~~~~~~~~i~~ 136 (206)
T PF06570_consen 117 ILVSIVGGLVFYFIFKYIYP 136 (206)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 44455555555555544443
No 14
>PF09578 Spore_YabQ: Spore cortex protein YabQ (Spore_YabQ); InterPro: IPR019074 This protein is predicted to span the membrane several times. It is only found in genomes of species that perform sporulation, such as Bacillus subtilis, Clostridium tetani, and other members of the Firmicutes (low-GC Gram-positive bacteria). Mutation of this sigmaE-dependent gene blocks development of the spore cortex. The length of the C-terminal region, which includes some hydrophobic regions, is variable.
Probab=21.97 E-value=3.6e+02 Score=21.89 Aligned_cols=57 Identities=14% Similarity=0.241 Sum_probs=43.4
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhccCCH-HHHHHHHhhHHHHHHhhhhhhheeeecCCccc
Q 013387 22 VAPLFACMCACFLFILLKVLILRHKNA-RERILIFFPVDYGLSAGLLCLFLVYRVRGHLV 80 (444)
Q Consensus 22 ISPllsG~~s~~lF~~ir~~VLrr~np-~~~al~~lPi~~~~t~~i~~~~Iv~kG~~~~l 80 (444)
+.-+++|++-.++|=+.| ++|+.-+ -+....+-=++|++..++.+|..+++.....+
T Consensus 2 l~~~~~G~~lg~~yD~~r--~~r~~~~~~~~~~~i~DllfWl~~~~~~F~~l~~~N~G~i 59 (80)
T PF09578_consen 2 LYSILSGIILGFLYDLYR--VFRRVFRHSRWLTGIEDLLFWLLAALIVFYFLYWTNYGEI 59 (80)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 455789999999999988 4444322 25667777889999999999999998876533
No 15
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=21.42 E-value=2.8e+02 Score=21.82 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=26.4
Q ss_pred CC-HHHHHHHHhhHHHHHHhhhhhhheeeecC
Q 013387 46 KN-ARERILIFFPVDYGLSAGLLCLFLVYRVR 76 (444)
Q Consensus 46 ~n-p~~~al~~lPi~~~~t~~i~~~~Iv~kG~ 76 (444)
+| -+|..+.++-+...+..++..+++++.|+
T Consensus 27 k~~~lk~i~~~vAy~lli~~gli~~~vV~sGP 58 (58)
T PF10966_consen 27 KGKFLKFIVSLVAYILLIVSGLIMFFVVFSGP 58 (58)
T ss_pred hChHHHHHHHHHHHHHHHHHHHheEEEEeeCC
Confidence 55 78888888888888899999999999886
No 16
>PF10779 XhlA: Haemolysin XhlA; InterPro: IPR019715 Haemolysin XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes [].
Probab=20.16 E-value=1e+02 Score=24.55 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=14.4
Q ss_pred HHHhhhHHHHHHHHHHHHHHH
Q 013387 415 CGWVMTIIFCCGAAFAIFYAS 435 (444)
Q Consensus 415 ~~Wi~T~p~a~~is~~l~~~~ 435 (444)
.-|+....+++++++++++++
T Consensus 50 ~kW~~r~iiGaiI~~i~~~i~ 70 (71)
T PF10779_consen 50 TKWIWRTIIGAIITAIIYLII 70 (71)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 357777777777777666654
No 17
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=20.12 E-value=2e+02 Score=32.01 Aligned_cols=104 Identities=13% Similarity=0.242 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHH-HHhhccchhHhhhcccccc------ccCchhHHHhHHHHHHHHHHHhcCCCccccchhhhceeeee
Q 013387 325 WWFRALGGLGAVM-GFILCGWKLTQCLGGKLTY------MSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVG 397 (444)
Q Consensus 325 ~wil~~g~~~i~~-G~~~~G~rVi~TvG~~it~------l~p~~gf~ael~aa~~v~~as~~GlPVSTTh~ivGavvGvG 397 (444)
.|+.++|++++.+ |+-+.|--+.+.-|.++.+ =+|..||.+-+... +++=| -|+|-.++.+.++.|
T Consensus 6 ~~l~l~g~v~l~L~g~~~m~~Gv~~~~G~~lr~~L~~~t~np~~gvl~Gi~~T--~llQS-----Statt~lt~gfV~aG 78 (533)
T COG1283 6 VLLNLLGAVALLLFGIKMVGDGVQRAAGDRLRKILARFTSNPILGVLAGIVAT--ALLQS-----STATTVLTIGFVAAG 78 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCcHHHHHHHHHHH--HHHHh-----cchHHHHHHHHHhcc
Confidence 4666666654432 3333333333445555543 25777876654433 33322 133555666666666
Q ss_pred eeCCCcccc---hHHHHHHHHHHhhhH------HHHHHHHHHHHHHH
Q 013387 398 IADDIQNVN---WKLLFKFICGWVMTI------IFCCGAAFAIFYAS 435 (444)
Q Consensus 398 ~~~~~~~Vn---w~~~~~I~~~Wi~T~------p~a~~is~~l~~~~ 435 (444)
+..-..++- =-.++.-+.+|++++ |.+.++++++|.+.
T Consensus 79 l~sl~~Ai~vilGANIGTt~Ta~iva~~l~~~~~~ll~~G~~~~~f~ 125 (533)
T COG1283 79 LLSLKQAIGVILGANIGTTVTAWIVALDLSWLSPPLLAIGAILFFFG 125 (533)
T ss_pred ccchhhhhhheeccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 665211111 122555666777665 33445555555544
Done!