BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013388
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana GN=AMSH1
PE=2 SV=1
Length = 507
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/426 (64%), Positives = 326/426 (76%), Gaps = 4/426 (0%)
Query: 20 IKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYDVT 79
++LL+ L+ELE+L+P VQQ+I+EL K + +H + N +L W S K + +YD
Sbjct: 85 MRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQAHPA-NGSLGWSSAVKPSFNSYDHA 143
Query: 80 KALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLYGHW 139
K P Y GS QQ P++E+FR+MS+NF RPN ETLS+HS+LGP GL W
Sbjct: 144 KVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVNF-RPNEETLSKHSILGPGGLSAQW 202
Query: 140 QPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPNDEIE 199
QPPK D V+YP+NID +P+ IPS +Q +S I T+ SN EPEK V+ N++I+
Sbjct: 203 QPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI-TNGSNDEPEKPIVEPSVASNEKIQ 261
Query: 200 IHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLS 259
+ TEE SMISFE E+ N ++IRQPSPPPVL EVQDL+ A+ P+V E EC + NSL
Sbjct: 262 KNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAEVQDLVPALCPEVREPECMIENSLP 321
Query: 260 DAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQE 318
D RSE PL+LHI+T+MMD FM+LAKSNT KNLETCGILAGSLKNRKFYITALIIPKQE
Sbjct: 322 DESLRSESPLELHIATSMMDTFMRLAKSNTKKNLETCGILAGSLKNRKFYITALIIPKQE 381
Query: 319 STSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAI 378
STSDSCQATNEEEIFEVQDK+SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE+VAI
Sbjct: 382 STSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAI 441
Query: 379 VMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKF 438
VMAPQD++R HGIFRLT+PGGM+VIR C +RGFH H P DGGPIY C +VYMNPNLKF
Sbjct: 442 VMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAHSSPEDGGPIYNTCKEVYMNPNLKF 501
Query: 439 DVIDLR 444
DVIDLR
Sbjct: 502 DVIDLR 507
>sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana GN=AMSH3
PE=1 SV=2
Length = 507
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/432 (46%), Positives = 273/432 (63%), Gaps = 13/432 (3%)
Query: 21 KLLNALSELEELQPAVQQKINELNRKKTNQVTGWSH----ASQNSTLEWPSLKKQTLTNY 76
+L ++ELE L+P Q +++LNR + S + + +EWP K + +
Sbjct: 81 RLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSYSSDAVEWPPAHKASYSRP 140
Query: 77 DVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLY 136
D+ K L Y ++ T+ +D+QF+++S +F PN TLSRHS LGPNGL
Sbjct: 141 DINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLPPNQATLSRHSFLGPNGLK 199
Query: 137 GHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKTDSSNVEPEKSSVQSISTP 194
PKS+ V+YP+N D + L + PS SS + DS V S++ S+ +
Sbjct: 200 RQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNGDSQEV----STLNSVLSL 255
Query: 195 NDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSP-QVTETECQ 253
+D +E S + +E P ++QPSPPPVL +V +A + P +V +
Sbjct: 256 DDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQVHQELAQICPSKVADPRPG 315
Query: 254 VGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITAL 312
+ + S Q LH+ +MD+F++LA+SNT++NLETCG+LAGSLKNR F+IT L
Sbjct: 316 PAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGVLAGSLKNRVFHITTL 375
Query: 313 IIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 372
IIPKQESTSDSCQ NEEEIFEVQD+ SLFPLGWIHTHPTQ+CFMSS+D+HTHYSYQIML
Sbjct: 376 IIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQTCFMSSVDLHTHYSYQIML 435
Query: 373 PESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYM 432
PE+VAIVMAP D + HGIF L+ P G+SVIR CQQRGFHPH+ DG PIY+ C+ V++
Sbjct: 436 PEAVAIVMAPTDESTPHGIFHLSDPSGVSVIRNCQQRGFHPHEESEDGNPIYEHCSHVFL 495
Query: 433 NPNLKFDVIDLR 444
N LK++V+DLR
Sbjct: 496 NAKLKYEVLDLR 507
>sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2
PE=2 SV=1
Length = 223
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 143/175 (81%)
Query: 270 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 329
+HIS ++++F +LA+ NT+K+LETCG LA L+ FY+T LIIPKQESTS+SCQA NE
Sbjct: 49 VHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNE 108
Query: 330 EEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH 389
E+F +Q++R L+P+GWIHTHP+Q CFMSS+D+HTHYSYQ+M+PE+ AIV+AP D+++ +
Sbjct: 109 VEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSY 168
Query: 390 GIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
GIF+LT PGGM V+R C + GFHPH P DG P+Y+ C++VY N NL+F++ DLR
Sbjct: 169 GIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 133/207 (64%), Gaps = 5/207 (2%)
Query: 241 AAMSPQVTETECQVGNSLSDAFDRSEPL-QLHISTTMMDNFMKLAKSNTDKNLETCGILA 299
A +P +T T + S+A + L ++ + + FM+LA++NT +++ETCGIL+
Sbjct: 507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566
Query: 300 GSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSS 359
G+L N F IT +IIPKQE T+D+C E EIFE Q + L LGWIHTHPTQ CF+S+
Sbjct: 567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSA 626
Query: 360 IDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPD 419
+DVHTH SYQ +L E++A+V++P A GIFRLT P G+ +++C+ + FHPH PP +
Sbjct: 627 VDVHTHCSYQYLLQEAIAVVISPM-ANPNFGIFRLTDPPGLETVQKCKLKSFHPH-PPVN 684
Query: 420 GGPIYKPCTDVYMNPNLKFD--VIDLR 444
G PIY V + K D V+DLR
Sbjct: 685 GIPIYTKVDHVDLIWGKKSDSKVVDLR 711
>sp|Q9P371|SST2_SCHPO AMSH-like protease sst2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sst2 PE=1 SV=1
Length = 435
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 113/168 (67%), Gaps = 10/168 (5%)
Query: 280 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 339
F+ + K NT KNLETCGIL G L+ F+IT L+IP QE+TSD+C T+E +FE QDK
Sbjct: 273 FLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKH 332
Query: 340 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 399
+L LGWIHTHPTQ+CFMSS+D+HTH SYQ+MLPE++AIVMAP T GIFRL P G
Sbjct: 333 NLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLPEAIAIVMAPSKNTS--GIFRLLDPEG 390
Query: 400 MSVIRQCQQRG-FHPHDPPPDGGPIYKPCT--DVYMNPNLKFDVIDLR 444
+ I +C++ G FHPH+ G +Y N K V+DLR
Sbjct: 391 LQTIVKCRKPGLFHPHE-----GKVYTMVAQPGHVREINSKLQVVDLR 433
>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2
Length = 436
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 135/231 (58%), Gaps = 30/231 (12%)
Query: 214 TSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHIS 273
T+ A +S V R +P L+ VQ+L+ V C V +
Sbjct: 236 TNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV-----------------LP 272
Query: 274 TTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIF 333
+ F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ + D C N EE+F
Sbjct: 273 EDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELF 332
Query: 334 EVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFR 393
VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+ + GIFR
Sbjct: 333 NVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGIFR 390
Query: 394 LTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
LT+ GM + C+++GFHPH P ++ C V + ++K V+DLR
Sbjct: 391 LTN-AGMLEVSACKKKGFHPHTKEP---RLFSICKHVLVK-DIKIIVLDLR 436
>sp|Q76N33|STALP_MOUSE AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1
Length = 436
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
Query: 272 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 331
+S + F+ LA SNT + +ETCGIL G L + +F IT +++PKQ + D C N EE
Sbjct: 271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330
Query: 332 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI 391
+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+ + GI
Sbjct: 331 LFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGI 388
Query: 392 FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
FRLT+ GM + C+++GFHPH P ++ C+ V + ++K V+DLR
Sbjct: 389 FRLTN-AGMLEVSTCKKKGFHPHTKDP---KLFSICSHVLVK-DIKTTVLDLR 436
>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1
Length = 436
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 30/231 (12%)
Query: 214 TSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHIS 273
T+ A +S V R +P L+ VQ+L+ V C V +
Sbjct: 236 TNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV-----------------LP 272
Query: 274 TTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIF 333
+ F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ + D C N EE+F
Sbjct: 273 KDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELF 332
Query: 334 EVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFR 393
VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ML E++AIV +P+ + GIFR
Sbjct: 333 NVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVCSPKH--KDTGIFR 390
Query: 394 LTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
LT+ GM + C+++GFHPH P ++ C V + ++K V+DLR
Sbjct: 391 LTN-AGMLEVSACKKKGFHPHTKEP---RLFSICKHVLVK-DIKIIVLDLR 436
>sp|O95630|STABP_HUMAN STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1
Length = 424
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 113/165 (68%), Gaps = 7/165 (4%)
Query: 280 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 339
F++LA +NT + +ETCGIL G L +F IT ++IPKQ + SD C NEEE+F +QD++
Sbjct: 267 FLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQ 326
Query: 340 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 399
L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPESVAIV +P+ ++ G F+LT G
Sbjct: 327 GLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSPK--FQETGFFKLTD-HG 383
Query: 400 MSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 384 LEEISSCRQKGFHPHSKDP---PLFCSCSHVTV-VDRAVTITDLR 424
>sp|Q6TH47|STBPA_DANRE STAM-binding protein-like A OS=Danio rerio GN=stambpa PE=2 SV=3
Length = 418
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 5/151 (3%)
Query: 269 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 328
QL + + F+KLA++NT + +ETCGIL G L F +T +I+PKQ D C N
Sbjct: 250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309
Query: 329 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 388
EEE+F +QD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ +
Sbjct: 310 EEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FNE 367
Query: 389 HGIFRLTSPGGMSVIRQCQQRGFHPH--DPP 417
G FRLT GM + C+QRGFHPH DPP
Sbjct: 368 TGYFRLTD-YGMDDVGTCKQRGFHPHPKDPP 397
>sp|Q8R424|STABP_RAT STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1
Length = 424
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 276 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 335
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 336 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 395
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 396 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
>sp|Q9CQ26|STABP_MOUSE STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1
Length = 424
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 276 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 335
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 336 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 395
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 396 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 444
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 279 NFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK 338
F++L+++NT + +ETCGIL G L +F +T +I+PKQ D C +EEE+F +QD+
Sbjct: 258 KFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQ 317
Query: 339 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPG 398
+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 318 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLTD-Y 374
Query: 399 GMSVIRQCQQRGFHPH--DPP--PDGGPIYKPCTDVYM 432
GM I +C+Q+GFHPH +PP GG + DV M
Sbjct: 375 GMKEIGECRQKGFHPHCKEPPLFSAGGHVSVTEQDVTM 412
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 254 VGNSLSDAF---DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKF--Y 308
+G ++DA D +E + HIS+ + ++ A++ LE G++ G L +
Sbjct: 14 LGEKITDATPLPDTAETI--HISSLALLKMLQHARAGVP--LEVMGLMLGELIDEYTIRV 69
Query: 309 ITALIIPKQESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVH 363
I +P Q TS S +A + + ++ ++ Q R +GW H+HP C++SS+DV+
Sbjct: 70 IDVFAMP-QSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVN 128
Query: 364 THYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDP 416
T S++ + +VA+V+ P + R + FR + RQ H DP
Sbjct: 129 TQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPTAEPRQITSNLGHLQDP 184
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 292 LETCGILAGSLKNR-KFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 343
+E G++ G + + + Q T S +A +++F+ Q R
Sbjct: 52 MEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 109
Query: 344 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 400
+GW H+HP C++SS+DV T S++ + +VA+V+ P + + + FRL SP
Sbjct: 110 VGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPA-- 167
Query: 401 SVIRQCQQRGFHPHDPPPDGGPIYKP 426
+V+R + P + G + KP
Sbjct: 168 TVVRNQE-----PRQTTSNVGLLNKP 188
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 270 LHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATN 328
++IS+ + ++ + T +E G++ G + + + + Q T S +A +
Sbjct: 30 VYISSLALLKMLRHGRHGTP--MEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 329 ---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 383
++ + ++ Q R +GW H+HP C++SS+D++T S++ + P +VA+V+ P
Sbjct: 88 PVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPI 147
Query: 384 DATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 426
+ + + FRL +P + + G P + G I KP
Sbjct: 148 QSVKGKVVIDAFRLINPSTLMM-------GQEPRQTTSNLGHINKP 186
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 292 LETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 343
+E G++ G + + + + Q T S +A +++F+ Q R
Sbjct: 47 MEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 104
Query: 344 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 400
+GW H+HP C++SS+DV+T S++ + +VA+V+ P + + + FRL G +
Sbjct: 105 VGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 252 CQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYIT 310
+VG + ++ D E + +IS+ + +K ++ +E G++ G + +
Sbjct: 11 TKVGAADANKDDTKETV--YISSIALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVNVV 66
Query: 311 ALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVH 363
+ Q T S +A +++F+ Q R +GW H+HP C++SS+DV+
Sbjct: 67 DVFAMPQSGTGVSVEAV--DDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVN 124
Query: 364 THYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 400
T S++ + +VA+V+ P + + + FRL G +
Sbjct: 125 TQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 229 PPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNT 288
P P L +VQ A+ +E V NS D + IS+ M + A+S
Sbjct: 5 PNPGLVDVQR--DALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSG- 61
Query: 289 DKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-------DKRSL 341
NLE G++ G ++ IT E T A +E + V+ + R
Sbjct: 62 -GNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLE 120
Query: 342 FPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSP 397
+GW H+HP C++S IDV T Q VA+V+ P ++ G FR T P
Sbjct: 121 NVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFR-TIP 179
Query: 398 GGM 400
G+
Sbjct: 180 EGI 182
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 269 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQAT 327
Q++IS+ + +K ++ +E G++ G + + + + Q T S +A
Sbjct: 28 QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAV 85
Query: 328 N---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
+ + ++ ++ Q R +GW H+HP C++S +D++T S++ + +VA+V+ P
Sbjct: 86 DPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 145
Query: 383 QDATRKHGI---FRLTSPGGMSVIRQ 405
+ + + FRL +P M V+ Q
Sbjct: 146 IQSVKGKVVIDAFRLINP-NMLVLGQ 170
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 261 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 319
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 320 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 374
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 375 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 426
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 261 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 319
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 320 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 374
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 375 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 426
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 344 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 400
+GW H+HP C++SS+DV+T S++ + P +VA+V+ P + + + FR +P +
Sbjct: 107 VGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNL 166
Query: 401 SV 402
+
Sbjct: 167 QI 168
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 264 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 320
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 321 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 373
A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 374 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 401
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 264 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 320
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 321 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 373
A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 374 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 401
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Query: 269 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 328
+ IS T + A+S NLE G++ G + F +T E T A +
Sbjct: 51 HVRISATALIKMTMHARSGG--NLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQD 108
Query: 329 E--EEIFEVQD-----KRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMA 381
E E I E D R +GW H+HP C++S IDV T Q +A+V+
Sbjct: 109 EANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVID 168
Query: 382 P 382
P
Sbjct: 169 P 169
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 259 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 317
S+ D SE + +IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79
Query: 318 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 372
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 139
Query: 373 PESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQ 408
+VA+V+ P + + + FR +P M++ ++ +Q
Sbjct: 140 DRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQ 178
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 262 FDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQEST 320
D SE Q++IS+ + +K ++ +E G++ G + + + Q T
Sbjct: 24 LDTSE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVRVVDVFAMPQSGT 79
Query: 321 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 373
S +A + +F+ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 GVSVEAV--DHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQ 137
Query: 374 ESVAIVMAP 382
+VA+V+ P
Sbjct: 138 RAVAVVVDP 146
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 293 ETCGILAGSL--KNRKFYITALIIPKQESTSDSCQATNEEEIFEVQD-------KRSLFP 343
E G++ G + +NR Y+ E T A NE + VQ R
Sbjct: 82 EIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENV 141
Query: 344 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
+GW H+HP C++S IDV+T + Q VAIV+ P
Sbjct: 142 VGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDP 180
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 269 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQA-- 326
Q+ IS + AK NLE G+L G + F I + E T A
Sbjct: 55 QIKISAIALLKMTMHAKRGG--NLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQA 112
Query: 327 ------TNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVM 380
T E+ + + ++ +GW H+HP C++S IDV T Q VAIV+
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKV-VGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVI 171
Query: 381 AP 382
P
Sbjct: 172 DP 173
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 270 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 329
+ IS + + A+S +LE G++ G + F +T E T A +E
Sbjct: 51 VRISAVALLKMVMHARSG--GSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDE 108
Query: 330 EEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
+ V + R +GW H+HP C++S IDV T Q+ P VA+V+ P
Sbjct: 109 ANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVIDP 167
Query: 383 Q 383
+
Sbjct: 168 E 168
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQ--ESTSDSCQATNEEEIFEVQDKRSLF 342
+ + +LE G++ G + F +T A +P + E+ ++ + NE + +Q R
Sbjct: 65 ARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAG 124
Query: 343 ----PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 383
+GW H+HP C++S IDV T Q+ P VA+V+ P+
Sbjct: 125 RMENAVGWYHSHPGYGCWLSGIDVTTQDMQQLGGP-FVAVVIDPE 168
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 344 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRL 394
+GW H+HP C++S++D+ T S++ + +VA+V+ P + + + FRL
Sbjct: 99 VGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVKGKVVIDAFRL 152
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 292 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK---RSLFP----L 344
LE G + G ++ I E T A E + + VQ +S++ +
Sbjct: 55 LEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVI 114
Query: 345 GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATR----KHGIFRLTSPGGM 400
GW H+HP C++S +DV T Q VA+V+ P+ + G FR G
Sbjct: 115 GWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGND 174
Query: 401 SVIR 404
IR
Sbjct: 175 GSIR 178
>sp|Q3TV65|MPND_MOUSE MPN domain-containing protein OS=Mus musculus GN=Mpnd PE=2 SV=2
Length = 487
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 261 AFDRSEPLQLHISTT---MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITAL-IIPK 316
A ++ +P + +S+ ++D L +S E G L G +T L P
Sbjct: 249 AINKFQPFNVAVSSNVLFLLDFHCHLTRS------EVVGYLGGRWDINNQMLTVLRAFPC 302
Query: 317 QESTSDS-CQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 375
+ D+ AT EEEI++V R L +GW H+HP S D+ YQ+ L S
Sbjct: 303 RSRLGDTDTAATVEEEIYQVLFLRGLSLVGWYHSHPHSPAVPSLQDIDAQMEYQLRLQGS 362
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 281 MKLAKSNTDK-NLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 339
MK+ + D ++E G+L G +++ + E T A E + VQ
Sbjct: 81 MKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLE 140
Query: 340 SLFP-----LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 383
+ P +GW H+HP C++S ID T Q +AIV+ P+
Sbjct: 141 TAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPK 189
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 271 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 330
H+ + + + + + LE G+L G ++N I E T A E
Sbjct: 53 HVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEA 112
Query: 331 EIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
+ V Q R LGW H+HP C++S IDV T Q + IV+ P
Sbjct: 113 YEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDP 171
>sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 341 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 393
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2
Length = 440
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 341 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 393
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 341 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 393
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 283 LAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ------ 336
L + N+E G+L G++ F I E T A E + VQ
Sbjct: 85 LCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMV 144
Query: 337 ------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ----DAT 386
++ +L +GW H+HP C++S+ID+ T Q +AIV+ P D
Sbjct: 145 ERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQK 204
Query: 387 RKHGIFR 393
+ G FR
Sbjct: 205 VRIGSFR 211
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 292 LETCGILAGSLK-NRKFYITALIIPKQES-TSDSCQATNEEEIFEVQDK-----RSLFPL 344
LE G++ G ++ N + A +P + + T + QA E + + R +
Sbjct: 72 LEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAV 131
Query: 345 GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
GW H+HP C++S IDV T Q VAIV+ P
Sbjct: 132 GWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP 169
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 342
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 343 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 394
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 185
Query: 395 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 422
T P G PPD GP
Sbjct: 186 TYPKGY---------------KPPDEGP 198
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 342
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 343 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPG 398
L GW H+HP C++S IDV T Q VA+V+ P R S G
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPT---------RTISAG 179
Query: 399 GMSVIRQCQQRGFHPHDPPPDGGP 422
+++ R + PPD GP
Sbjct: 180 KVNL---GAFRTYPKGYKPPDEGP 200
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 342
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 343 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 394
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 187
Query: 395 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 422
T P G PPD GP
Sbjct: 188 TYPKGY---------------KPPDEGP 200
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 342
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 343 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 394
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 185
Query: 395 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 422
T P G PPD GP
Sbjct: 186 TYPKGY---------------KPPDEGP 198
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 286 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 342
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 343 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPG 398
L GW H+HP C++S IDV T Q VA+V+ P R S G
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPT---------RTISAG 179
Query: 399 GMSVIRQCQQRGFHPHDPPPDGGP 422
+++ R + PPD GP
Sbjct: 180 KVNL---GAFRTYPKGYKPPDEGP 200
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 292 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLG------ 345
+E G++ G + F + E T A E F V+ + L +G
Sbjct: 76 IEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIV 135
Query: 346 -WIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 382
W H+HP C++S IDV T + Q +A+V+ P
Sbjct: 136 GWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDP 173
>sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1
Length = 213
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 280 FMKLA-KSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-- 336
MK+ + T ++E G+L G + + E T A NE + V+
Sbjct: 82 LMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYL 141
Query: 337 --------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 388
K +GW H HP C++ IDV T Q + +AIV+ P ++
Sbjct: 142 TERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQ 201
Query: 389 H----GIFRLTS 396
G FR S
Sbjct: 202 GKVEIGAFRNVS 213
>sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRI1 PE=3 SV=1
Length = 373
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 272 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 331
++TT M L+ + ++E G+L G N + + T A E
Sbjct: 71 LATTKM-----LSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESY 125
Query: 332 IFEVQDKRSLFP-----LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDA- 385
+ VQ + +GW H+HP C++S+ID+ T Q +AIV+ P+ +
Sbjct: 126 EYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSL 185
Query: 386 ---TRKHGIFR 393
T G FR
Sbjct: 186 SGNTLDIGAFR 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,155,929
Number of Sequences: 539616
Number of extensions: 6970528
Number of successful extensions: 15490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 15366
Number of HSP's gapped (non-prelim): 159
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)