BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013389
(444 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/442 (87%), Positives = 408/442 (92%), Gaps = 1/442 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW A LDEYEKLVIRM TPRVVIDN VCPTAT+VKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWSAYLDEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD+NGNKLTDESVI+YIEQSL TIHYGR++ FNGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDINGNKLTDESVINYIEQSLGTIHYGRTHDFNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ IDRIEAR
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+LR S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILRFSADSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDR KLLFDVVCTLTDMEYVVFHATINTAG++AYLEFYI+H DGTPISS
Sbjct: 241 ERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFYIKHTDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RRASEGVRLELC DRQGLLADVTRTFRENGLNVTRAE+ST
Sbjct: 301 EPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEISTSTK 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKEL-PMIYHQKGESEEQTVGVGGAV 422
A N+FYVTD +GNPAD KIIE+VRQ+IGLSNLKVKEL P++YHQ+ E EEQ VGV G V
Sbjct: 361 TATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVKELPPLMYHQEAEREEQGVGVAGTV 420
Query: 423 LLSLGSLVRRNLYNLGLIRSYS 444
LLSLGSLVR+NLYNLGLIRSYS
Sbjct: 421 LLSLGSLVRKNLYNLGLIRSYS 442
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/441 (85%), Positives = 413/441 (93%), Gaps = 1/441 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP CLDEYEKLVIRMNTPRVV+DNAVC T TLVKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 5 MEWP-CLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSI 63
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL IH+ RSNSFNGLTALELTG
Sbjct: 64 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTG 123
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADL+C+VVE+K+WTHNGRIASLIYVKDC+SG+PIEDSQ+IDRIE R
Sbjct: 124 TDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGR 183
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VS+AVTHTERRLHQMMFADRDYER P++R +++ P VTVQNW
Sbjct: 184 LRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNWV 243
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDR KLLFDVVCTLTDM+YVVFHATINTAG++AYLEFYIRH DG+PISS
Sbjct: 244 ERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPISS 303
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
E ERQRVIQCL+AA+ RRASEGVRLELC EDR+GLLADVTRTFRENGLNVTRAE+ST +
Sbjct: 304 EAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSE 363
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
ALN+FYVTD MGNPADPKIIEAVRQKIGLSNLKVKELP+I HQ+ E +E TVGVGGAVL
Sbjct: 364 IALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGAVL 423
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
LSLGSLVRRNLYNLGLIRS+S
Sbjct: 424 LSLGSLVRRNLYNLGLIRSHS 444
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/441 (85%), Positives = 413/441 (93%), Gaps = 1/441 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP CLDEYEKLVIRMNTPRVV+DNAVC T TLVKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWP-CLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSI 59
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL IH+ RSNSFNGLTALELTG
Sbjct: 60 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTG 119
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADL+C+VVE+K+WTHNGRIASLIYVKDC+SG+PIEDSQ+IDRIE R
Sbjct: 120 TDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGR 179
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VS+AVTHTERRLHQMMFADRDYER P++R +++ P VTVQNW
Sbjct: 180 LRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNWV 239
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDR KLLFDVVCTLTDM+YVVFHATINTAG++AYLEFYIRH DG+PISS
Sbjct: 240 ERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPISS 299
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
E ERQRVIQCL+AA+ RRASEGVRLELC EDR+GLLADVTRTFRENGLNVTRAE+ST +
Sbjct: 300 EAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSE 359
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
ALN+FYVTD MGNPADPKIIEAVRQKIGLSNLKVKELP+I HQ+ E +E TVGVGGAVL
Sbjct: 360 IALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGAVL 419
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
LSLGSLVRRNLYNLGLIRS+S
Sbjct: 420 LSLGSLVRRNLYNLGLIRSHS 440
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/442 (85%), Positives = 408/442 (92%), Gaps = 1/442 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW ACLDEYEKLVIRM TPRVVIDNAVCP AT+VKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWSACLDEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTD+SVI+YIEQSL TIHYGR NGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKTGSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC+VV+AKVWTHNGRIA+L++VKDCNSGSPIED+QQIDRIEAR
Sbjct: 121 TDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK VSMAVTHTERRLHQMMFADRDYER P+L+ S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQMMFADRDYERNPILQPSGDSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQC+DRTKLLFDVVCTLTDMEY+VFHATI T+G+RAYLEFYIRH DGTPISS
Sbjct: 241 ERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RR SEGVRLELC DRQ LLADVTRTFRENGLNVTRAE+ST RD
Sbjct: 301 EPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGLNVTRAEISTTRD 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKEL-PMIYHQKGESEEQTVGVGGAV 422
ALN+FYVTD +GN ADPK+IE+VRQKIG+S+LKVKEL P++YHQ+ E E+QT GV G V
Sbjct: 361 MALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVKELPPLVYHQEAEREDQTAGVAGTV 420
Query: 423 LLSLGSLVRRNLYNLGLIRSYS 444
LLSLGSLV+RNLY+LGLIRSYS
Sbjct: 421 LLSLGSLVKRNLYHLGLIRSYS 442
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/442 (85%), Positives = 406/442 (91%), Gaps = 1/442 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW AC DEYEKLVIRM TPRVVIDNAV AT+VKVDSAR+H ILLEAVQVLTDLNL I
Sbjct: 1 MEWSACSDEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL TIH G++ NGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGTIHPGKTTGSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADLQCSVV+AKVWTHNGRIASL+YVKDCNSGSPIED+Q IDRIEAR
Sbjct: 121 TDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK VSMAVTHTERRLHQ+MFADRDYER P+L+ S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQVMFADRDYERKPILQPSGDSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDRTKLLFDVVCTLTDMEY+VFHATINTAG+RAYLEFYIRH DGTPISS
Sbjct: 241 ERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RRASEGVRLELC DRQGLLADVTRTFRENGLNVTRAE+ST D
Sbjct: 301 EPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEISTAGD 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKEL-PMIYHQKGESEEQTVGVGGAV 422
ALN+FYVTD +GNPADPK+IE+VRQKIG+SNLKVKEL P+IYHQ+ E E+QT GV G V
Sbjct: 361 MALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVKELPPLIYHQEAEREDQTAGVAGTV 420
Query: 423 LLSLGSLVRRNLYNLGLIRSYS 444
LLSLGSLV++NLY+LGLIRSYS
Sbjct: 421 LLSLGSLVKKNLYHLGLIRSYS 442
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/441 (81%), Positives = 401/441 (90%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPA DEYEKL+IRM+TPRVVIDN+VC +ATLVKVDSARRHGILL+AVQVLTDLNL I
Sbjct: 1 MEWPASTDEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYIS+DG++FMDVFHVTD NGNK+ DESV+ YIEQSL IHYGR+N NGLTALELTG
Sbjct: 61 KKAYISADGKWFMDVFHVTDQNGNKIMDESVLKYIEQSLGNIHYGRTNRSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DRVGLLSEVFAVLADLQC V +AKVWTHNGRIASLIYVKDC+SGS IEDSQ+I++IE R
Sbjct: 121 SDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIELR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAKM+VSMAV HTERRLHQ+MF DRDYER P+L+ ++D P+VTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKMSVSMAVMHTERRLHQLMFVDRDYERTPILKLTSDNPLVTVQNWE 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
R YSVVNVQCKDRTKLLFD+VC LTDMEYVVFHATINT+G+RAYLEFYIRH DGTPISS
Sbjct: 241 GRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIRHKDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RRASEGVRLELC EDRQGLLA+V RTFRENGLNVTRAE+ST +
Sbjct: 301 EPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGN 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A NIFYVTD +G PAD KIIE+VRQKIGLSNL+VKELP+I HQ+ E E+Q VG+GGAVL
Sbjct: 361 MATNIFYVTDAIGIPADSKIIESVRQKIGLSNLEVKELPLINHQEAEGEDQAVGIGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
LS+GSL+RRNLY+LGLI+S S
Sbjct: 421 LSIGSLLRRNLYHLGLIKSCS 441
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/441 (81%), Positives = 397/441 (90%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKL+IRMNTPRVVIDN+V +ATLVKVDSARRHGILL+AV+VL DLNL I
Sbjct: 1 MEWPACTDEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYIS+DG++FMDVFHVTD NGNK+ DESV+ YIEQSL IHYGR+N NGLTALELTG
Sbjct: 61 KKAYISADGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVE+KVWTHNGRIASLIYVKD +SGS IEDSQ+I++IE R
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIELR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK++ SMAV HTERRLHQ+MF DRDYER P+L+ ++D VTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKISFSMAVMHTERRLHQLMFVDRDYERAPILKLTSDNASVTVQNWE 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
R YSVVNVQCKDRTKLLFD+VC LTDMEYVVFHATINT G+RAYLEFYIRH DGTPISS
Sbjct: 241 GRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RRASEGVRLELC EDRQGLLA+V RTFRENGLNVTRAE+ST +
Sbjct: 301 EPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRAEISTIGN 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A NIFYVTD +GNPAD KIIE+VRQKIGLSNL+VKELP+I HQ+ E E+Q VG+GGAVL
Sbjct: 361 MAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVKELPLINHQEAEREDQAVGMGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
LS+GSLVRRNLY+LGLI+S S
Sbjct: 421 LSIGSLVRRNLYHLGLIKSCS 441
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/450 (81%), Positives = 390/450 (86%), Gaps = 9/450 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP+ LDEYEKLVIRMNTPRVVIDN C TATLVKVDSARR G LLEAVQVLTDLNL I
Sbjct: 1 MEWPSRLDEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT-ALELT 122
KKAY+SSDGR+FMDVFHVTD NG KLTDESVISY+EQSL T HY R+ FNG T ALELT
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTTTALELT 120
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIED Q+ID I A
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTVQN 241
RLR+VLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+L+ + D P VTVQN
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
A+R YSVV VQCKDRTKLLFDV+ TLTDM+YVVFHA INTA ERAYLEFYIRH DGTPI
Sbjct: 241 CAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTPI 300
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNV-------T 354
SSE ERQRVIQCL+AA+ RRASEGVRLELC EDR GLLADV RTFRENGLNV T
Sbjct: 301 SSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFRENGLNVTRAEISTT 360
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAE+ST RD ALN+FYVTD +GN AD K IE+VRQ+IGLSNLKVKELP YHQ E EEQ
Sbjct: 361 RAEISTTRDMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREEQ 420
Query: 415 TVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
T GVGGAVL +LGS+VRRNLYNLGLIRS S
Sbjct: 421 TFGVGGAVLFTLGSMVRRNLYNLGLIRSCS 450
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/441 (79%), Positives = 393/441 (89%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKLVIRM+TPRVVIDNAVC TAT+VKVDSAR+HGIL++AVQVL+DLNL I
Sbjct: 1 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD NGNKLTDESV+SYIEQSL +IH G+++ NGLT LELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGLTILELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+ QC VV+AKVWTHNGRIASLIYVKD NS +PIEDSQ+I IEAR
Sbjct: 121 TDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIR+AK +V+ AV H ERRLHQMM+ DRDY+R P+ + S+D P+VTVQNWA
Sbjct: 181 LRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPIFKFSSDTPIVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDR KLLFDVVC LT+MEYVVFHATI T ++AYLEFYIRH DGTPISS
Sbjct: 241 ERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHKDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPER RVIQCL+AAV RRA EGVRLELC EDRQGLLA+V RTFRENGLNVTRAE+ST D
Sbjct: 301 EPERHRVIQCLQAAVERRAFEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGD 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A N+FYVTD +G PADPKI+E+VRQK+GLSNLKVKELP++ H+K E E+Q VGVGGAVL
Sbjct: 361 MASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPVGVGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
L LGSLVRRNLYNLGLI+S S
Sbjct: 421 LCLGSLVRRNLYNLGLIKSCS 441
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/449 (81%), Positives = 389/449 (86%), Gaps = 8/449 (1%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP+ LDEYEKLVIRMNTPRVVIDN C TATLVKVDSARR G LLEAVQVLTDLNL I
Sbjct: 1 MEWPSRLDEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT-ALELT 122
KKAY+SSDGR+FMDVFHVTD NG KLTDESVISY+EQSL T HY R+ FNG T ALELT
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTTTALELT 120
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIED Q+ID I A
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTVQN 241
RLR+VLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+L+ + D P VTVQN
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
A+R YSVV VQCKDRTKLLFDV+ TLTDM+YVVFHA INTA ERAYLEFYIRH DGTPI
Sbjct: 241 CAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTPI 300
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA------DVTRTFRENGLNVTR 355
SSE ERQRVIQCL+AA+ RRASEGVRLELC EDR GLLA DV RTFRENGLNVTR
Sbjct: 301 SSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFDVMRTFRENGLNVTR 360
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AE+ST R ALN+FYVTD +GN AD K IE+VRQ+IGLSNLKVKELP YHQ E EEQT
Sbjct: 361 AEISTTRHMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREEQT 420
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
GVGGAVL +LGS+VRRNLYNLGLIRS S
Sbjct: 421 FGVGGAVLFTLGSMVRRNLYNLGLIRSCS 449
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/441 (78%), Positives = 389/441 (88%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKL+IRM+TPRVVIDNAVC TATLVKV SARR+G LL A+QVL DLNLLI
Sbjct: 1 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++FMDVFHVT NG+K+ DE+++ YIEQSL + H R+N NGLT LEL+G
Sbjct: 61 KKAYISSDGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVLELSG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDC+SGS IEDSQ+I +IE R
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEVR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VSM+V H+ERRLHQMMFADRDYER P+L+ ++D +VTVQNWA
Sbjct: 181 LRNVLKGDNDIRSAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLTSDNTLVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVN+QCKDR KLLFDVVC LTDMEYVVFHATINT +AYLEFYIRH DGTPISS
Sbjct: 241 ERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+A+V RRASEGV+L+LC ED+QGLLA+V RTFRENGLNVTRAE+ST +
Sbjct: 301 EPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRAEISTLEN 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A N+FYVTD G PADP IE+VRQKIG SNL+VKELP+IYHQK E E+QTVG+GGAVL
Sbjct: 361 MATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVKELPLIYHQKTEREDQTVGIGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
+GSLVRRNLY+LGLI+S S
Sbjct: 421 WFIGSLVRRNLYSLGLIKSCS 441
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/441 (78%), Positives = 391/441 (88%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKLVIRM+TPRVVIDNAVC TAT+VKVDSAR+HGIL++AVQVL+DLNL I
Sbjct: 1 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD NG+KLTD+SV+SYIEQSL +IH ++N NGLT LELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGLTILELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+ QC VV+AKVWTHNGRIASLIYVKD NSG+ IEDSQ+I IEAR
Sbjct: 121 TDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIR+AK +V+ AV H ERRLHQMM+ DRDY+R P+L+ ++ P+VTVQNWA
Sbjct: 181 LRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPILKFASVTPIVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVN+QCKDR KLLFDVVC LTDMEYVVFHATI T ++AYLEFYIRH DGTPISS
Sbjct: 241 ERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHRDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPER RVIQCL+AAV RRA EGVRLELC EDRQGLLA+V RTFRENG+NVTRAE+ST +
Sbjct: 301 EPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGMNVTRAEISTIGN 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A N+FYVTD +G P DPKI+E+VRQK+GLSNLKVKELP++ H+K E E+Q VGVGGAVL
Sbjct: 361 MASNVFYVTDAVGYPVDPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPVGVGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
L LGSLVR+NLYNLGLI+S S
Sbjct: 421 LCLGSLVRKNLYNLGLIKSCS 441
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/444 (78%), Positives = 386/444 (86%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M ++EWP LDEY KL+ RMNTPRVVIDNAVC TATLVKVDSARRHGILLEAVQVLTDLN
Sbjct: 5 MVEIEWPGSLDEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLN 64
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
L I+KAYISSDG +FMDVFHVTDL GNKLTDE VISY+EQSL TIH G+ + N LTALE
Sbjct: 65 LSIQKAYISSDGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPATSNDLTALE 124
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTGTDRVGLLSEVFAVLA+LQC VVEAKVWTHNGRIASLIYVKDCNSGSPI++S++ID I
Sbjct: 125 LTGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTI 184
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RLRNVLKGD+DI AK +VSM VTHTERRLHQMMFADRDYER PV +H+ D PVVTVQ
Sbjct: 185 VGRLRNVLKGDDDILYAKTSVSMTVTHTERRLHQMMFADRDYERKPVQQHTEDSPVVTVQ 244
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N +R YSVVN+QCKDR KLLFDV+CT+TDM+YVVFH TI T+ RAYLEFYIRH DGTP
Sbjct: 245 NLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFYIRHTDGTP 304
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
ISSE ERQRVIQCL+A++ RR S GVRLELC DR LLADVTRTFRENGLNVTRAEVST
Sbjct: 305 ISSEAERQRVIQCLQASIERRTSRGVRLELCTTDRPCLLADVTRTFRENGLNVTRAEVST 364
Query: 361 ERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGG 420
++ ALN+FYVTD G+ AD K+I++VR+KIG+SNLKVKELP++ QK E EEQ VGG
Sbjct: 365 SQEVALNLFYVTDGHGSAADTKMIDSVREKIGMSNLKVKELPLVSQQKTEGEEQAASVGG 424
Query: 421 AVLLSLGSLVRRNLYNLGLIRSYS 444
AVLLSLGS++RRNLYNLGLIRSYS
Sbjct: 425 AVLLSLGSILRRNLYNLGLIRSYS 448
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/441 (77%), Positives = 387/441 (87%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW AC DEYEKLV RM+TPRVVIDNAVC +T+VK DSAR+HGILLEAVQ+L+DLNL I
Sbjct: 1 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAY+SSDGR+FMDVFHVTD NGNKLTDESV+ YIEQSL +I+ G++N NGLTALEL G
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGLTALELKG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+LQC VVEAKVWTHNGR ASLIYVKD +G+ IEDSQ+I+R+EAR
Sbjct: 121 TDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LR VL+GD+DIRSA ++S AV H ERRLHQMMFADRDY+ P+ + S++ PVVTVQNWA
Sbjct: 181 LRYVLQGDSDIRSATTSISDAVIHPERRLHQMMFADRDYQMNPIFKFSSETPVVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+R YSVVNVQCKDR KLLFDVVC LTDMEYVVFHATINT ++AY+EFYIRH DGTPISS
Sbjct: 241 ERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKDGTPISS 300
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
EPERQRVIQCL+AAV RR+ EGVRLELC EDRQGLLA+V RTFRENGLNVTRA+++T D
Sbjct: 301 EPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRADITTTGD 360
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
A N+FY TD +G PAD KIIE+VRQKIGL+NLKVKELP HQK E E+Q+VGVGGAVL
Sbjct: 361 LAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVKELPFASHQKVEREDQSVGVGGAVL 420
Query: 424 LSLGSLVRRNLYNLGLIRSYS 444
LSLGS+VRRNLYNLGLI+S S
Sbjct: 421 LSLGSIVRRNLYNLGLIKSCS 441
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 314/443 (70%), Positives = 364/443 (82%), Gaps = 4/443 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
M LDEYEKLVIRMNTPRVVIDN VC +AT+VKVDS+RR+GILLEAVQ+LTDLNL I
Sbjct: 1 MAMKGYLDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG + MDVFHVTDLNGNKL D+SV+ YIEQS+ET++YG + NGLTALELTG
Sbjct: 61 KKAYISSDGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSE+FAVL+DL C VV+AK+WTHNGR+AS+IY+KDC SG+PI DS +I +IE R
Sbjct: 121 TDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEGR 180
Query: 184 LRNVLKGDNDIRSAKMTVSM--AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L+NVL GDND+ SA T ++ H ERRLHQ+MF DRDYER + VVTVQN
Sbjct: 181 LKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSKKHERSPMVVVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
WA+R YSVVNV C+DRTKLLFDVVCTLTDMEY VFHATINTA ++A+LEFYIRH DG+PI
Sbjct: 241 WAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGSPI 300
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
SSE ERQRVIQCLEAAV RRA EGVRLEL D+QGLLA+VTRTFRENGLNVTR E+ST
Sbjct: 301 SSEAERQRVIQCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRTEISTS 360
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
D A NIFYVTD G+ D K+IE+VR+KIGL L+VKE+P +YH+KG+ EEQ A
Sbjct: 361 SDMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMYHKKGDGEEQQ--QTKA 418
Query: 422 VLLSLGSLVRRNLYNLGLIRSYS 444
VL+SLGSLV RNL+N GLI+S S
Sbjct: 419 VLVSLGSLVWRNLFNFGLIKSCS 441
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/443 (70%), Positives = 369/443 (83%), Gaps = 5/443 (1%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
M LDEYEKLVIRMNTPRVVIDN VC +AT+VKVDS+RR+GILLEAVQ+LTDLNL I
Sbjct: 1 MAMKGYLDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+ MDVFHVTDLNGNKL D+SV+ YIEQS+ET++YG + NGLTALELTG
Sbjct: 61 KKAYISSDGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSE+FAVL+DL C VV+AK+WTHNGR+AS+IY++D +SG+PI DSQ+I +IE R
Sbjct: 121 TDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEGR 180
Query: 184 LRNVLKGDNDIRS-AKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L+NVL GDND+ S AK VS+ ++ H ERRLHQ+MF DRDYER + ++ VVTVQN
Sbjct: 181 LKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYERRSNKQETSPTVVVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
WA+R YSVVNV C+DRTKLLFDVVCTLTDMEY VFHATINTA ++A+LEFYIRH DG+PI
Sbjct: 241 WAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGSPI 300
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
SSE ERQRVI CLEAAV RRA EGVRLEL D+QGLLA+VTRTFRENGLNVTR E+ST
Sbjct: 301 SSEAERQRVILCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRTEISTS 360
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
+ A NIFYVTD G+ D K+IE+VR+KIGL L+VKE+P + H+KG+ EEQ A
Sbjct: 361 SEMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMNHKKGDGEEQQT---KA 417
Query: 422 VLLSLGSLVRRNLYNLGLIRSYS 444
VL+SLGSLV RNL+N GLI+S S
Sbjct: 418 VLVSLGSLVWRNLFNFGLIKSCS 440
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/452 (64%), Positives = 354/452 (78%), Gaps = 16/452 (3%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNGNKLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGDNDIRS-AKMTVSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+LRN+LK D+ ++ + VS TH ERRLHQ MF DRDYE+ + S P+V+VQ
Sbjct: 181 QLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIVSVQ 237
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+LEFY+RH DG P
Sbjct: 238 NLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSDGHP 297
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
+SSEPERQR+IQCL+AA+ RR +GVRLELC DR GLLA+VTR RENGLN+ RAE+ST
Sbjct: 298 VSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLNIARAEIST 357
Query: 361 ERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE-LPMI--------YHQKGES 411
+ A N+FYVTD GN DP+II+++R+KIG+ +L VKE P+ HQ+ +
Sbjct: 358 KDGVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVKEPFPISCREAVEKEQHQEAQD 417
Query: 412 EEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSY 443
+ G GG VL+SLGSLV RNLY+LGLI+SY
Sbjct: 418 HQGRYG-GGTVLVSLGSLVMRNLYHLGLIKSY 448
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 293/454 (64%), Positives = 353/454 (77%), Gaps = 20/454 (4%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGD----NDIRSAKMTVSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
+LRN+LK D ND R+ VS TH ERRLHQ MF DRDYE+ + S P+V
Sbjct: 181 QLRNLLKADDGYQNDTRTC---VSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIV 234
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
+VQN R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+LEFY+RH D
Sbjct: 235 SVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 294
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
G P+SSEPERQR+IQCL+AA+ RR +GVRLELC DR GLLA+VTR RENGLN+ RAE
Sbjct: 295 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAE 354
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE-LPMIYHQKGESEE--- 413
+ST+ A N+FYVTD GN DP+II+++R+KIG+ +L VKE P+ + E E+
Sbjct: 355 ISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCREAVEKEQHIE 414
Query: 414 ----QTVGVGGAVLLSLGSLVRRNLYNLGLIRSY 443
Q GG VL+SLGSLV RNLY+LGLI+SY
Sbjct: 415 PQDHQERYGGGTVLVSLGSLVMRNLYHLGLIKSY 448
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 293/454 (64%), Positives = 353/454 (77%), Gaps = 20/454 (4%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGD----NDIRSAKMTVSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
+LRN+LK D ND R+ VS TH ERRLHQ MF DRDYE+ + S P+V
Sbjct: 181 QLRNLLKADDGYQNDTRTC---VSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIV 234
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
+VQN R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+LEFY+RH D
Sbjct: 235 SVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 294
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
G P+SSEPERQR+IQCL+AA+ RR +GVRLELC DR GLLA+VTR RENGLN+ RAE
Sbjct: 295 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAE 354
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE-LPMIYHQKGESEE--- 413
+ST+ A N+FYVTD GN DP+II+++R+KIG+ +L VKE P+ + E E+
Sbjct: 355 ISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCREAVEKEQHIE 414
Query: 414 ----QTVGVGGAVLLSLGSLVRRNLYNLGLIRSY 443
Q GG VL+SLGSLV RNLY+LGLI+SY
Sbjct: 415 PQDHQGRYGGGTVLVSLGSLVMRNLYHLGLIKSY 448
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/463 (63%), Positives = 353/463 (76%), Gaps = 29/463 (6%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKV---------DSARRHGILLEAVQ 54
ME C +EYEKLV+RMN PRVVIDN VCP +T+VKV DSAR GILLE+VQ
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQ 60
Query: 55 VLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN 114
+LTD+NL IKKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ +
Sbjct: 61 LLTDMNLWIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYT 120
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-D 173
GLTALELTGTDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ D
Sbjct: 121 GLTALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGD 180
Query: 174 SQQIDRIEARLRNVLKGD----NDIRSAKMTVSMAV-THTERRLHQMMFADRDYERMPVL 228
S ++ R+E +LRN+LK D ND R+ VS TH ERRLHQ MF DRDYE+ +
Sbjct: 181 SDRVQRVEGQLRNLLKADDGYQNDTRTC---VSYGGNTHMERRLHQRMFMDRDYEKKFDI 237
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
S P+V+VQN R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+
Sbjct: 238 EKS---PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAF 294
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRE 348
LEFY+RH DG P+SSEPERQR+IQCL+AA+ RR +GVRLELC DR GLLA+VTR RE
Sbjct: 295 LEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRE 354
Query: 349 NGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE-LPMIYHQ 407
NGLN+ RAE+ST+ A N+FYVTD GN DP+II+++R+KIG+ +L VKE P+ +
Sbjct: 355 NGLNIARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVKEPFPISCRE 414
Query: 408 KGESEE-------QTVGVGGAVLLSLGSLVRRNLYNLGLIRSY 443
E E+ Q GG VL+SLGSLV RNLY+LGLI+SY
Sbjct: 415 AVEKEQHIEPQDHQGRYGGGTVLVSLGSLVMRNLYHLGLIKSY 457
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/447 (62%), Positives = 340/447 (76%), Gaps = 30/447 (6%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN+PRVVIDNAVC ATLVKVDSA +HGILLEAVQVLTDL L I KA +SSDGR+FMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 80 HVTDLNGNKLTDESVISYIEQSLET-----IHYGRSNSF----NGLTALELTGTDRVGLL 130
+VTD NG KLTDE VI YIE++LET +G+S + TA+ELTGTDR GLL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SE+FAVL+DL+C+VVEA+VWTHN R+A L+YV D +G+PI+D Q+I +IE LRNV++G
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM---------PVLRHSTDYPVVTVQN 241
+++IR AK SM +THTERRLHQ+MFADRDYE++ P+ + P VTV+N
Sbjct: 181 NSNIRGAKTVASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVEN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
+R YSVVNVQCKDR KLLFDVVCTLTDMEYVVFHATI++ G + + E+YIRH DG P+
Sbjct: 241 CLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHTDGCPV 300
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
+SE ERQRVIQCLEAA+ RRASEGVRLELC DR GLL+DVTR FRENG++VTRAEVST
Sbjct: 301 NSEAERQRVIQCLEAAIRRRASEGVRLELCTNDRVGLLSDVTRIFRENGMSVTRAEVSTR 360
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
D+A+N+FYVTD GNP DPK +EAVR++IGL+ L+VK+ M K E A
Sbjct: 361 GDKAVNVFYVTDAAGNPVDPKTVEAVRREIGLTILQVKDNCM--DTKSPRREP------A 412
Query: 422 VLLSLGSLVR----RNLYNLGLIRSYS 444
+ S G+L + R LY+LGLI+SYS
Sbjct: 413 IPFSFGNLFKSKSERFLYSLGLIKSYS 439
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/449 (60%), Positives = 335/449 (74%), Gaps = 16/449 (3%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD E R ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+ EFYIRH DG+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
PISSE ER RV QCL+ A+ RR+ EGVRLELC DR LL+DVTRTFRENGL V +AEVS
Sbjct: 293 PISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKG--ESEEQT 415
T+ D A N+FYVTD G+ + I+AVRQ++G+ L +E P +Y + G ++ +
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGN 412
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
G GG L LG+ V+RNL +LGLI+S S
Sbjct: 413 GGGGGIGLFYLGNFVKRNLVSLGLIKSCS 441
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/458 (57%), Positives = 326/458 (71%), Gaps = 33/458 (7%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W L DE+EKLVIRMN PRV +DNA TATL+KVDSA R G LLE VQVL D++L+
Sbjct: 4 WSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
I++AYISSDG +FMDVFHVTD GNKL+++ V I+QSL R+ SF L
Sbjct: 64 IRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGP----RARSFRSLRRSVGV 119
Query: 117 ------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
T +ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G P
Sbjct: 120 QAANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLP 179
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
I+D ++ +I+ L VLKGD D RSA VS+ T+T+RRLHQMM+ADRDY+ +
Sbjct: 180 IDDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDMDSGSTN 239
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P+VTV+N+AD+ Y+VVN++C DR KLLFD VCTLTDM+YVVFHAT+ G AY E
Sbjct: 240 DRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQE 299
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+YIRH+DG PISSE E+QRVI CLEAA+ RR SEG+RLELC EDR GLL+DVTR FRENG
Sbjct: 300 YYIRHVDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENG 359
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGE 410
L+VTRAEV+T +A+N FYVTD GNP + IEAVR++IGL+ L+VK+ +
Sbjct: 360 LSVTRAEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKD-----DAYSK 414
Query: 411 SEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
S Q G SLG+L R + LYNLGL+RSYS
Sbjct: 415 SPPQESG-----RFSLGNLFRSRSEKVLYNLGLMRSYS 447
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/448 (59%), Positives = 331/448 (73%), Gaps = 12/448 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMN PRVVIDNA+CPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK--DCNSGSPIEDSQQIDRI 180
G DR GLLSEVFAVLAD+QCSVV+A+ WTH GR+A +++++ + SG+ +D ++ RI
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVT-HTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
ARL ++L+GD + A V A H +R LHQ+M AD D R P P V+V
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLD--RAPSFPAPALSPAVSV 235
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
Q+WA+R YSVV V C+DR KLLFDVVCTL DM+YVVFH T++TAG+RA EFYIR DG+
Sbjct: 236 QSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGS 295
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
PI SE ER+R+ QCL+AA+ RR+ EGVRLELC DR GLL++VTRTFRENGL V +AEVS
Sbjct: 296 PIRSEAERERLNQCLQAAIERRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVVQAEVS 355
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE---LPMIYHQKGESEEQTV 416
T+ D A N+FYVTD G AD I+AVR+++G+ L V E P ++ + G +
Sbjct: 356 TKGDLASNVFYVTDAAGKAADQSAIDAVRERVGMDRLVVSEEPRPPQVFSKDGPGDRDDS 415
Query: 417 GVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
GG L+ LG+LV+RNLYNLGLI+S S
Sbjct: 416 VGGGLGLVYLGNLVKRNLYNLGLIKSCS 443
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/439 (60%), Positives = 327/439 (74%), Gaps = 16/439 (3%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD E R ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+ EFYIRH DG+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
PISSE ER RV QCL+ A+ RR+ EGVRLELC DR LL+DVTRTFRENGL V +AEVS
Sbjct: 293 PISSEAERHRVSQCLQYAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKG--ESEEQT 415
T+ D A N+FYVTD G+ + I+AVRQ++G+ L +E P +Y + G ++ +
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGN 412
Query: 416 VGVGGAVLLSLGSLVRRNL 434
G GG L LG+ V+RNL
Sbjct: 413 GGGGGIGLFYLGNFVKRNL 431
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/439 (60%), Positives = 327/439 (74%), Gaps = 16/439 (3%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD E R ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+ EFYIRH DG+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGS 292
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
PISSE ER RV QCL+ A+ RR+ EGVRLELC DR LL+DVTRTFRENGL V +AEVS
Sbjct: 293 PISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVS 352
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKG--ESEEQT 415
T+ D A N+FYVTD G+ + I+AVRQ++G+ L +E P +Y + G ++ +
Sbjct: 353 TKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGN 412
Query: 416 VGVGGAVLLSLGSLVRRNL 434
G GG L LG+ V+RNL
Sbjct: 413 GGGGGIGLFYLGNFVKRNL 431
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/456 (57%), Positives = 323/456 (70%), Gaps = 39/456 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA ATL+KVDSA + G LLE VQVLTDL+LLI++AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD +GNKL+++ V I+QSL R+ SF L T
Sbjct: 72 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGP----RACSFRSLRRSVGVQTASENTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +GSPI + ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLT 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YP 235
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY+ ST P
Sbjct: 188 KIKQLLLYVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDIDDGEGGSTSERRKP 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+VTV+N AD+ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI G AY E+YIRH
Sbjct: 248 LVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIRH 307
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG+PISSE ERQRVI CLEAA+ RR EG+RLELC EDR GLL++VTR FRENGL+VTR
Sbjct: 308 MDGSPISSEAERQRVINCLEAAIRRRNPEGIRLELCSEDRIGLLSEVTRIFRENGLSVTR 367
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE---LPMIYHQKGESE 412
AEV+T +A+N FYVTD G P + IEAVR++IGL+ L+VK+ P ++G
Sbjct: 368 AEVTTRDSQAVNAFYVTDASGYPVKSETIEAVRKEIGLTILRVKDDSNSPPPQEERGR-- 425
Query: 413 EQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
SLG++ R + LYNLGLI+SYS
Sbjct: 426 -----------FSLGNIFRSRSEKFLYNLGLIKSYS 450
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/410 (59%), Positives = 304/410 (74%), Gaps = 19/410 (4%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W L DE+EKLVIRMN PRV +DNA TATL+KVDSA R G LLE VQVL D++L+
Sbjct: 4 WSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
I++AYISSDG +FMDVFHVTD GNKL+++ V I+QSL R+ SF L
Sbjct: 64 IRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGP----RARSFRSLRRSVGV 119
Query: 117 ------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
T +ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G P
Sbjct: 120 QAANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLP 179
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
I+D ++ +I+ L VLKGD D RSA VS+ T+T+RRLHQMM+ADRDY+ +
Sbjct: 180 IDDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDMDSGSTN 239
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P+VTV+N+AD+ Y+VVN++C DR KLLFD VCTLTDM+YVVFHAT+ G AY E
Sbjct: 240 DRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQE 299
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+YIRH+DG PISSE E+QRVI CLEAA+ RR SEG+RLELC EDR GLL+DVTR FRENG
Sbjct: 300 YYIRHVDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENG 359
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE 400
L+VTRAEV+T +A+N FYVTD GNP + IEAVR++IGL+ L+VK+
Sbjct: 360 LSVTRAEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKD 409
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/448 (56%), Positives = 308/448 (68%), Gaps = 27/448 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVF+VTD +GNK+TDE+++ YI +SL G + F TA
Sbjct: 69 DGGWFMDVFNVTDPDGNKVTDEAILDYITKSL-----GPESCFTSSMRSVGVKQSMDHTA 123
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG+DR GLLSEV AVL L+C+VV A+VWTHN R A+++ V D +GS I D +++
Sbjct: 124 IELTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLS 183
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR-HSTDYPVV 237
RI+ L NVLKG N R AK VS VTHTERRLHQMMFADRDYER P V
Sbjct: 184 RIKELLCNVLKGSNKSRGAKTVVSHGVTHTERRLHQMMFADRDYERANNDELDEKQRPNV 243
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
+V NW ++ YSVV + KDR KLLFD VCTLTDMEYVVFHA I+ G A+ E+YI+HID
Sbjct: 244 SVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHID 303
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
G+P+ SE ERQR+IQCLEAA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAE
Sbjct: 304 GSPVKSEAERQRIIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAE 363
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVG 417
V+T +A+N FYV+D G P D K I+++RQ IG + LKVK P E++ V
Sbjct: 364 VTTRAGKAVNTFYVSDASGYPVDAKTIDSIRQAIGQTILKVKSSP--------EEQKPVS 415
Query: 418 VGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
G L + R+ N GL+RSYS
Sbjct: 416 QESPTRFLFGGLFKSRSFVNFGLVRSYS 443
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/461 (54%), Positives = 318/461 (68%), Gaps = 26/461 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ + WP ++E L R++ P V IDN C +LVKV+SA RHGILLE VQVLTDL+
Sbjct: 1 MESVCWPYFDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L+I KAYISSDGR+FMDVFHVTD GNKLTD+ +I YI+Q+L G +
Sbjct: 61 LIISKAYISSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRT 120
Query: 111 ---NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
S TA+ELTGTDR GLLSE+ AVL +L+C+VV A+VWTHN R+A ++YV D ++
Sbjct: 121 VGVQSIGEHTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDEST 180
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
PIE+ +Q+ I+ +L NVLKG++D R K SM +THTERRLHQMMFADRDYE P
Sbjct: 181 SRPIEEPEQLAAIKEQLSNVLKGNDDRRGVKTDFSMGLTHTERRLHQMMFADRDYEG-PD 239
Query: 228 LRH--STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
R P++ ++N ++ YSVV V CKDR KLLFD VCTLTDM+YVV HATI ++G
Sbjct: 240 TRSLGENGRPIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGT 299
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
A E+YIRH+DG + +E E+QRVI+CLEAA+ RR SEGVRLELC DR GLL+D+TR
Sbjct: 300 YALQEYYIRHMDGCTLDTEGEKQRVIKCLEAAIERRVSEGVRLELCTSDRVGLLSDITRI 359
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIY 405
FRENGL+VTRA+V+T D+A+N+FYVTD GNP D KI+EA+R++IG + L+VK +P
Sbjct: 360 FRENGLSVTRADVTTRADKAVNVFYVTDTSGNPVDMKIVEAMRREIGHTILQVKSIP--- 416
Query: 406 HQKGESEEQTVGVGGAVLLSLGSLVRRNL----YNLGLIRS 442
G S GSL++ L YN GLI+S
Sbjct: 417 ---SSPRPCPTDTGDKAKFSFGSLLKSQLERLSYNFGLIKS 454
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/453 (56%), Positives = 317/453 (69%), Gaps = 33/453 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+KLVIRMN PRV IDN ATL+KVDS+ RHG LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD NG KL D+ V I+QSL R+ SF L T
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGP----RARSFRSLRRSVGVQAAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL+G DR GLLSEVFAVL DL+C+VV A+VWTHN R+AS++Y+ D SG PI+D +
Sbjct: 127 IELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLA 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---P 235
+I+ L VLKGD D SA VSM TH ERRLHQMM+ADRD++ + S Y P
Sbjct: 187 KIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFD-LNYTSCSESYQSRP 245
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+VTV+N ++ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI AY E++IRH
Sbjct: 246 LVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRH 305
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG+PISSE ERQRVI CLEAA+ RR +EG++LELC EDR GLL DVTR FRENGL+VTR
Sbjct: 306 VDGSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTR 365
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AEV+T +A+N+FYVTD GN + I+AVR+ IGL+ L VK+ Q+ + Q
Sbjct: 366 AEVTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKD----DEQQSKCPPQE 421
Query: 416 VGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
G G SLG+L R + LYNLGLI+S S
Sbjct: 422 -GSG----FSLGNLFRSRSEKVLYNLGLIKSCS 449
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/444 (55%), Positives = 311/444 (70%), Gaps = 19/444 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HG LLE VQVLTDLNL+I KAY+SS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYVSS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL--ETIHYGRSNSFN-----GLTALELTG 123
DG +FMDVF+VTD +GNK+TDE+++ YI +SL E+ SF TA+ELTG
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSMGSFGVKQSIDHTAIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVLA L+C+V+ A+VWTHN R A+++ V D +GS I D +++ R++
Sbjct: 129 SDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRVKEL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM--PVLRHSTDYPVVTVQN 241
L NVLKG N R A+ VS VTHTERRLHQMMFADRDYER VL P V+V N
Sbjct: 189 LCNVLKGSNKYRGARTVVSHGVTHTERRLHQMMFADRDYERANNDVLDEK-QRPNVSVVN 247
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
W ++ YSV+ ++ KDR KLLFD VCTLTDMEYVVFHA I+ G A+ E+YI+H+DG+P+
Sbjct: 248 WYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHVDGSPV 307
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
SE ERQR+IQCLEAA+ RR SEG++LELC +DR GLL+DVTR FREN L VTRAEV+T
Sbjct: 308 KSEAERQRIIQCLEAAIERRVSEGLKLELCTKDRIGLLSDVTRIFRENSLTVTRAEVTTR 367
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
+A+N FYV+D G P D K I+++RQ G + LKVK P E + V
Sbjct: 368 AGKAVNTFYVSDASGYPVDAKTIDSIRQATGQTILKVKGSP--------EELKPVSQESP 419
Query: 422 VLLSLGSLVR-RNLYNLGLIRSYS 444
G L + R+ N GL++SYS
Sbjct: 420 TRFLFGGLFKSRSFVNFGLVKSYS 443
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/453 (56%), Positives = 316/453 (69%), Gaps = 33/453 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+KLVIRMN PRV IDN ATL+KVDS+ RHG LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDV HVTD NG KL D+ V I+QSL R+ SF L T
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGP----RARSFRSLRRSVGVQAAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL+G DR GLLSEVFAVL DL+C+VV A+VWTHN R+AS++Y+ D SG PI+D +
Sbjct: 127 IELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLA 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---P 235
+I+ L VLKGD D SA VSM TH ERRLHQMM+ADRD++ + S Y P
Sbjct: 187 KIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFD-LNYTSCSESYQSRP 245
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+VTV+N ++ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI AY E++IRH
Sbjct: 246 LVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRH 305
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG+PISSE ERQRVI CLEAA+ RR +EG++LELC EDR GLL DVTR FRENGL+VTR
Sbjct: 306 VDGSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTR 365
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AEV+T +A+N+FYVTD GN + I+AVR+ IGL+ L VK+ Q+ + Q
Sbjct: 366 AEVTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKD----DEQQSKCPPQE 421
Query: 416 VGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
G G SLG+L R + LYNLGLI+S S
Sbjct: 422 -GSG----FSLGNLFRSRSEKVLYNLGLIKSCS 449
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/446 (55%), Positives = 307/446 (68%), Gaps = 15/446 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 DEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMRTVGVIPSTDSTVIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI+
Sbjct: 129 CDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 189 LRNVLKGSNTPREAKTVVSQGEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQRPDVC 248
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY E+Y+RHIDG
Sbjct: 249 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVRHIDG 308
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 309 SPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 368
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
T+ +ALN FYV+D G D K ++++RQ IG + LKVK P Q+ +S Q
Sbjct: 369 KTKGGKALNTFYVSDASGYSIDAKTLDSIRQTIGQTILKVKNNPEEQQQRQKSPSQE--- 425
Query: 419 GGAVLLSLGSLVRRNLYNLGLIRSYS 444
L G ++ N GL+RSYS
Sbjct: 426 SPTRFLFGGLFKSKSFVNFGLVRSYS 451
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/444 (56%), Positives = 307/444 (69%), Gaps = 19/444 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+V D +GNK+TDE+++ YI +SL + S G+ T++ELTG
Sbjct: 69 DGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMRSVGVIPSMDHTSIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSE+ AVL L+C+VV A+VWTHN R A+++ V D +GS I D +++ RI+
Sbjct: 129 SDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRIKEL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM--PVLRHSTDYPVVTVQN 241
L NVLKG N R AK VS VTHTERRLHQMMFADRDYER VL P V+V N
Sbjct: 189 LCNVLKGSNKFRGAKTVVSHGVTHTERRLHQMMFADRDYERADDEVL-DEKQRPNVSVVN 247
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
W D+ YSVV ++ KDR KLLFD VCTLTDMEYVVFHA I+ G AY E+YIRHIDG+P+
Sbjct: 248 WYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRHIDGSPV 307
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
S+ ER RVIQCLEAA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAEV+T
Sbjct: 308 KSDAERMRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTR 367
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
+A+N FYV D G D K IE++RQ IG + LKVK P E + V
Sbjct: 368 DGKAINTFYVRDASGYLVDGKTIESIRQVIGQTILKVKSNP--------DELKPVSQESP 419
Query: 422 VLLSLGSLVR-RNLYNLGLIRSYS 444
G L + R+ N GL+RSYS
Sbjct: 420 TRFLFGGLFKSRSFVNFGLVRSYS 443
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/450 (56%), Positives = 319/450 (70%), Gaps = 29/450 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 17 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 77 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQ 193
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 194 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 253
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY E+YIR
Sbjct: 254 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIR 313
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
HIDG+P++SE ERQRVIQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VT
Sbjct: 314 HIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVT 373
Query: 355 RAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RAEVST D+A+N FYV D G+ A D K +EA+RQ+IG + L+VK P H+K +E
Sbjct: 374 RAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPD--HRKSPPQE 431
Query: 414 QTVGVGGAVLLSLGSLVR-RNLYNLGLIRS 442
L S SL R R+LY+LGLIRS
Sbjct: 432 SP----SRFLFS--SLFRPRSLYSLGLIRS 455
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/448 (56%), Positives = 306/448 (68%), Gaps = 26/448 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE----TIHYGRSNSFNGLT---ALELTG 123
DG +FMDVF+VT +GNK+TDE+++ YI +SL RS T A+EL G
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTTDHIAIELMG 133
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR GLLSEV AVL +L+C++V A+VWTHN R A++++V D SGS I D Q++ I+
Sbjct: 134 TDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSIIKEL 193
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THTERRLHQMMFADRDYER + D+ P V
Sbjct: 194 LCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFDEKQRPNVN 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW+D+ YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY E+YI+HIDG
Sbjct: 251 VVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDG 310
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ S+ ERQRVIQCL AA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAEV
Sbjct: 311 SPVKSDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 370
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
+T+ +A+N FYV G P D K IE++RQ IG + LKV KG EE
Sbjct: 371 ATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKV---------KGSPEEMKSVP 421
Query: 419 GGAVLLSL--GSLVRRNLYNLGLIRSYS 444
+ SL G R+ N GL++SYS
Sbjct: 422 QDSPTRSLFSGLFKSRSFVNFGLVKSYS 449
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/450 (54%), Positives = 308/450 (68%), Gaps = 22/450 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----------ETIHYGRSNSFNGLTALE 120
DG +FMDVF+VTD +GNK+TDE V+ YI++SL TI G + S + T +E
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMRTI--GVTPSTDS-TVIE 119
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTG DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV------LRHSTDY 234
+ LRNVLKG N R AK +S HT+RRLHQMMF DRDYE V ++
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLSHGEVHTDRRLHQMMFEDRDYEHRAVVDDDSSIQDERQR 239
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY E+Y+R
Sbjct: 240 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 299
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
HIDG+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VT
Sbjct: 300 HIDGSPVKSEAEKQRVIQCLEAAINRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 359
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAEV T+ +ALN FYV+D G D K I+++RQ IG + LKVK P Q+ + Q
Sbjct: 360 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPEEQQQRQKPPSQ 419
Query: 415 TVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
L G ++ N GL+RSYS
Sbjct: 420 D---SPTRFLFGGLFKSKSFVNFGLVRSYS 446
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D E A +D+ + P V +DN + ++V V R +L + V LTD+
Sbjct: 219 RDYEHRAVVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQY 278
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALEL 121
++ + ++G ++V ++G+ + E+ + Q LE R + GL LEL
Sbjct: 279 VVFHGSVDTEGTEAYQEYYVRHIDGSPVKSEAEKQRVIQCLEAAINRRVSE--GL-KLEL 335
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TDRVGLLS V + + +V A+V T G+ + YV D SG I D++ ID I
Sbjct: 336 CTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIR 393
Query: 182 ARL-RNVLKGDND 193
+ + +LK N+
Sbjct: 394 QTIGQTILKVKNN 406
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/450 (56%), Positives = 319/450 (70%), Gaps = 29/450 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 14 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 74 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 130
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 131 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQ 190
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 191 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 250
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY E+YIR
Sbjct: 251 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIR 310
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
HIDG+P++SE ERQRVIQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VT
Sbjct: 311 HIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVT 370
Query: 355 RAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RAEVST D+A+N FYV D G+ A D K +EA+RQ+IG + L+VK P H+K +E
Sbjct: 371 RAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPD--HRKSPPQE 428
Query: 414 QTVGVGGAVLLSLGSLVR-RNLYNLGLIRS 442
L S SL R R+LY+LGLIRS
Sbjct: 429 SP----SRFLFS--SLFRPRSLYSLGLIRS 452
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/441 (55%), Positives = 307/441 (69%), Gaps = 23/441 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLL 130
DG +FMDVF+VT +GNK+TDE+++ YI + + +G++ TA+EL GTDR GLL
Sbjct: 69 DGGWFMDVFNVTGQDGNKVTDEAILDYIRK-VGVSPFGQTMDH---TAIELMGTDRPGLL 124
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SEV AVL +L+C+++ A+VWTHN R A++++V D +GS I D Q++ I+ L NVL G
Sbjct: 125 SEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKELLCNVLGG 184
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADR 245
N R AK V+ THTERRLHQMMFADRDYER + D+ P V V NW+D+
Sbjct: 185 GNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFAEKQRPNVNVVNWSDK 241
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY E+YI+HIDG+P+ S+
Sbjct: 242 DYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGSPVKSDA 301
Query: 306 ERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEA 365
ERQRVIQCL AA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAEV+T+ +A
Sbjct: 302 ERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKA 361
Query: 366 LNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLS 425
+N FYV G P D K IE++RQ IG + LKV KG EE + S
Sbjct: 362 VNTFYVRGASGFPVDSKTIESIRQTIGNTILKV---------KGSPEEMKSVPQDSPTRS 412
Query: 426 L--GSLVRRNLYNLGLIRSYS 444
L G R+ N GL++SYS
Sbjct: 413 LFSGLFKSRSFVNFGLVKSYS 433
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/450 (56%), Positives = 319/450 (70%), Gaps = 29/450 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 17 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 77 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQ 193
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 194 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 253
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY E+YIR
Sbjct: 254 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIR 313
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
HIDG+P++SE ERQRVIQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VT
Sbjct: 314 HIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVT 373
Query: 355 RAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RAEVST D+A+N FYV D G+ A D K +EA+RQ+IG + L+VK P H+K +E
Sbjct: 374 RAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPD--HRKSPPQE 431
Query: 414 QTVGVGGAVLLSLGSLVR-RNLYNLGLIRS 442
L S SL R R+LY+LGLIRS
Sbjct: 432 SP----SRFLFS--SLFRPRSLYSLGLIRS 455
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/449 (55%), Positives = 310/449 (69%), Gaps = 21/449 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 132
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI+
Sbjct: 133 CDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRIKNL 192
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 193 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 252
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY E+Y+RHIDG
Sbjct: 253 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVRHIDG 312
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 313 SPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTSDRVGLLSNVTRIFRENSLTVTRAEV 372
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGES---EEQT 415
T+ +ALN FYV+D G D K I+++RQ IG + LKVK P Q+ +S E T
Sbjct: 373 KTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPT 432
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+ G + S ++ N GL+RSYS
Sbjct: 433 RFLFGGLFKS------KSFVNFGLVRSYS 455
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/448 (55%), Positives = 307/448 (68%), Gaps = 26/448 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL--ETIHYGRSNSFN-----GLTALELTG 123
DG +FMDVF+VT +GNK+TDE+++ YI +SL E+ S TA+EL G
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTMDHTAIELMG 133
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR GLLSEV AVL +L+C+++ A+VWTHN R A++++V D +GS I D Q++ I+
Sbjct: 134 TDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKEL 193
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THTERRLHQMMFADRDYER + D+ P V
Sbjct: 194 LCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFAEKQRPNVN 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW+D+ YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY E+YI+HIDG
Sbjct: 251 VVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDG 310
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ S+ ERQRVIQCL AA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAEV
Sbjct: 311 SPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEV 370
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
+T+ +A+N FYV G P D K IE++RQ IG + LKV KG EE
Sbjct: 371 ATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKV---------KGSPEEMKSVP 421
Query: 419 GGAVLLSL--GSLVRRNLYNLGLIRSYS 444
+ SL G R+ N GL++SYS
Sbjct: 422 QDSPTRSLFSGLFKSRSFVNFGLVKSYS 449
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/453 (56%), Positives = 320/453 (70%), Gaps = 32/453 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLV RMN PRV +DN ATL+KVDSA + G LLE VQVL DLNL+I++AYISS
Sbjct: 12 DEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD GNKL++ V I+QSL R SF L T
Sbjct: 72 DGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGP----RGRSFRSLRRSVGVQAAEEHTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G PI+D ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLG 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YP 235
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY++ + ST P
Sbjct: 188 KIKQLLLFVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDQDDLDCGSTSERRKP 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+VTV++ AD+ Y+VVN++ DR KLLFD VCTLTDM+YVV+HAT+ G A E+YIRH
Sbjct: 248 LVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIRH 307
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG+PISSE ERQRVI CLEAA+ RR SEG+RLELC +DR GLL+DVTR FRENGL+VTR
Sbjct: 308 MDGSPISSEAERQRVIHCLEAAIRRRTSEGIRLELCSDDRAGLLSDVTRIFRENGLSVTR 367
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AEV+T +A+N+FYVTD GNP ++IEAVR++IGL+ L VK+ + K S E +
Sbjct: 368 AEVTTRGTQAVNVFYVTDASGNPVKSEMIEAVRKEIGLTVLCVKDDE--FCMKSPSPESS 425
Query: 416 VGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
SLG+L R + LYNLGLI+S S
Sbjct: 426 -------RFSLGNLFRSRSEKFLYNLGLIKSCS 451
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 309/449 (68%), Gaps = 21/449 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 132
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 133 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 192
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 193 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 252
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+ E+Y+RHIDG
Sbjct: 253 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDG 312
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 313 SPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 372
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGES---EEQT 415
T+ +ALN FYV+D G D K I+++RQ IG + LKVK P Q+ +S E T
Sbjct: 373 KTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPT 432
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+ G + S ++ N GL+RSYS
Sbjct: 433 RFLFGGLFKS------KSFVNFGLVRSYS 455
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 309/449 (68%), Gaps = 21/449 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 3 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 122
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 123 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 182
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 183 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 242
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+ E+Y+RHIDG
Sbjct: 243 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDG 302
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 303 SPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 362
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGES---EEQT 415
T+ +ALN FYV+D G D K I+++RQ IG + LKVK P Q+ +S E T
Sbjct: 363 KTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPT 422
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+ G + S ++ N GL+RSYS
Sbjct: 423 RFLFGGLFKS------KSFVNFGLVRSYS 445
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 309/449 (68%), Gaps = 21/449 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 129 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 189 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 248
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+ E+Y+RHIDG
Sbjct: 249 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDG 308
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ SE E+QRVIQCLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 309 SPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 368
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGES---EEQT 415
T+ +ALN FYV+D G D K I+++RQ IG + LKVK P Q+ +S E T
Sbjct: 369 KTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPT 428
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+ G + S ++ N GL+RSYS
Sbjct: 429 RFLFGGLFKS------KSFVNFGLVRSYS 451
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/452 (55%), Positives = 318/452 (70%), Gaps = 32/452 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA ATL+KVDSA + G LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVF+VTD +GNKL+++ V I+QSL R SF L T
Sbjct: 71 DGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGP----RGRSFRSLRRSVGVQAAAENTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSE+FA+L DL+C+VV ++VWTHN R+AS++Y+ D +G PI+D ++
Sbjct: 127 IELTGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLT 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--YPV 236
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY+ S P
Sbjct: 187 KIKQLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMDDADFGSASERKPF 246
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
VT++N D+ Y++VN++C DR KLLFD VCTLTDM+YVV+H TI G A E++IRH+
Sbjct: 247 VTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIRHM 306
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
DG+P+SSE ERQRVI CLEAA+ RR SEGVRLELC EDR GLL+DVTR FRENGL+VTRA
Sbjct: 307 DGSPVSSEAERQRVINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRA 366
Query: 357 EVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTV 416
EV+T +A+N+FYVTD G P + IEAVR++IGL+ L V + H K +E+
Sbjct: 367 EVTTRGSQAVNVFYVTDSSGYPVKNETIEAVRKEIGLTILHVNDDA---HSKSPPQERG- 422
Query: 417 GVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
L SLG++ R + LYNLGLIRSYS
Sbjct: 423 ------LFSLGNIFRSRSEKFLYNLGLIRSYS 448
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/448 (58%), Positives = 321/448 (71%), Gaps = 23/448 (5%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLV+RMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSEVFAVLADLQC VV+A+ WTH GR+A + +++ G D+ ++ RI A
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLR--GEG----DADRVARILA 171
Query: 183 RLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP--VVTV 239
RL ++++GD + + + AV H +RRLHQ+M AD + P YP V+V
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHNNSATP-------YPAAAVSV 224
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAYLEFYIRHIDG 298
Q+WA+R YSVV VQC+DR KLLFDVVC L ++YVVFH T++T AG+RA EFYI DG
Sbjct: 225 QSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSADG 284
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+PI SE ER+R+ QCL+AA+ RR+ EGVRLELC DR GLL++VTRTFRENGL V AEV
Sbjct: 285 SPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAHAEV 344
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMI--YHQKGESEEQTV 416
ST+ A N+FYVTD G A IEAVR ++G L V E P + ++
Sbjct: 345 STKGGLASNVFYVTDADGKAAGQSAIEAVRARVGADCLVVGEEPRPPRVFPEAGPGDRDH 404
Query: 417 GVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
G GG L+ LG+LV+RNLYNLGLI+S S
Sbjct: 405 GGGGLGLVYLGNLVKRNLYNLGLIKSCS 432
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/463 (53%), Positives = 315/463 (68%), Gaps = 39/463 (8%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W + L DE+EKLVIRMN PRV +DN T TL+KVDSA + G LLE VQVLTD+NL+
Sbjct: 4 WTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL--ETIHYGRSNSFNGL---- 116
+++AYISSDG +FMDVFHVTD NG K+ E V I+QSL + G+
Sbjct: 64 VRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAA 123
Query: 117 --TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +ELTG DR GLLSEVFA+LADL+C+VV A+VWTHN R+AS++Y+ D +G PI++
Sbjct: 124 EHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNP 183
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ +I+ L VL+GD D ++A VS TH +RRLHQ+M+ADRDY+ + DY
Sbjct: 184 DRLAKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYDI-----YDGDY 238
Query: 235 PV---------VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VTV + D+ Y+VVN++C DR KLLFD VCT+TDM+YVV+H T+N G
Sbjct: 239 SCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGP 298
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
AY E+YIRH+DG PISSE ERQRVI CLEAAV RR SEGV+LEL EDR GLL+DVTR
Sbjct: 299 EAYQEYYIRHVDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRI 358
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIY 405
FRENGL+V RAEV+T +A+N+FYVTD GNP + IEAVR++IGL+ L+VK+ P +
Sbjct: 359 FRENGLSVCRAEVTTRGSQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILRVKDDPCLK 418
Query: 406 HQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
ES + SL LVR R LYNLGL++S S
Sbjct: 419 SPTRESGK----------FSLRDLVRSRSERFLYNLGLMKSSS 451
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/451 (54%), Positives = 324/451 (71%), Gaps = 27/451 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN VC AT+++VDS +HGILL+ VQVLTD+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+V D +GNK+ D+ VI YI++ LE+ + + S G T++EL
Sbjct: 63 DGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLES-NASFAPSLRGSVGVMPSEDHTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
+G DR GLLSEV AVLADL+C+VV A++WTHN R A++++V D ++G ++D +++ I+
Sbjct: 122 SGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYER-----MPVLRHSTDYP 235
L NVLKG+ND+++AKMT+S +T ERRLHQ+MFADRDYER + L + P
Sbjct: 182 ELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSRP 241
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIR 294
VTV N ++ YSV+ ++ KDR KLLFD+VCTLTDMEYVVFH +N E AY EFYIR
Sbjct: 242 HVTVLN-IEKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYIR 300
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H+DG PISS+ ER+RVIQCLEAA+ RRASEG+ LELC EDR GLL+D+TRTFREN L +
Sbjct: 301 HVDGLPISSDAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRTFRENSLCIK 360
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAE+ST+ A + FYVTD G+P DPKI++++ ++IG + L+VK+ + ++E
Sbjct: 361 RAEISTKGGIAKDTFYVTDVTGSPVDPKIVDSICRQIGQTRLQVKQ--NLTLSPKPAQET 418
Query: 415 TVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
T+G LG+L + R N LIRSYS
Sbjct: 419 TMG------YLLGTLFKARTFQNFKLIRSYS 443
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 303/442 (68%), Gaps = 16/442 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL++ KAYIS
Sbjct: 9 DEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYISC 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SLE+ + S G+ T +EL G
Sbjct: 69 DGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRSVGVKPSVDYTVIELIG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSEV AVL L+C+VV A+VWTHN R A++++V D +GS I D +++ RI+
Sbjct: 129 NDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRIKGL 188
Query: 184 LRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHSTDYPVVTVQN 241
L NVL+G N + AK VS VTH ERRLHQMMFADRDYE + + P V V N
Sbjct: 189 LSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDVMEDQQKPNVKVVN 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
W D YSVV ++ KDR KLLFD VCTLTDM+YVVFHA + G AY E+YIRHIDG+P+
Sbjct: 249 WCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDGSPV 308
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
S+ ERQRVI CLEAA+ RR SEG++LELC DR GLL+DVTR FREN L VTRAEV+T+
Sbjct: 309 KSDAERQRVIHCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTK 368
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
+A+N FYV D G P D K I+++R+ IG + LKVK QK S++
Sbjct: 369 AGKAINTFYVRDPSGYPVDSKTIDSIRELIGQTILKVKGSSSPKEQKQASQD------SP 422
Query: 422 VLLSLGSLVR-RNLYNLGLIRS 442
G L R R+ N GLIRS
Sbjct: 423 TRFLFGGLFRSRSFVNFGLIRS 444
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/451 (57%), Positives = 319/451 (70%), Gaps = 28/451 (6%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGXWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSEVFAVLADLQC VV+A+ WTH GR+A + +++ G D ++ RI A
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLR----GEGXAD--RVARILA 171
Query: 183 RLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP----VV 237
RL ++++GD + + + AV H +RRLH++M AD + P YP V
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAADHNNSATP-------YPAAAAAV 224
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAYLEFYIRHI 296
+VQ+WA+R YSVV VQC+DR KLLFDVVC L ++YVVFH T++T AG+R EFYIR
Sbjct: 225 SVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRSA 284
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
DG+PI SE ER+R+ QCL+AA+ RR+ EGVRLELC DR GLL++VTRTFRENGL V A
Sbjct: 285 DGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAHA 344
Query: 357 EVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE---LPMIYHQKGESEE 413
EVST+ A N+FYVTD G A I+AVR ++G L V E P ++ + G +
Sbjct: 345 EVSTKGGLASNVFYVTDADGKAAGQSAIDAVRARVGADCLVVGEEPRPPRVFPEAGPGDR 404
Query: 414 QTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
G L+ LG+LV+RNLYNLGLI+S S
Sbjct: 405 DHGGG--LGLVYLGNLVKRNLYNLGLIKSCS 433
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/472 (52%), Positives = 324/472 (68%), Gaps = 38/472 (8%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L R+N PRVVIDN V AT++K+DS+ RHGILL+ VQVLTDL+L I K
Sbjct: 11 WPYFDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILK 70
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-----QSLETIHYGRSNSFNGL---T 117
A+ISSDG +FMDVFHVTD +GNKL+DE VI++IE Q+ T R+ L T
Sbjct: 71 AFISSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHT 130
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS-GSPIEDSQQ 176
A+ELTG DR GLLSE+ AVLA L C+VV A+VWTHN R+A ++YV D G P++D +
Sbjct: 131 AIELTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTK 190
Query: 177 IDRIEARLRNVLKGDN-DIRSAKMTVSMAVTHTERRLHQMMFADRD-----------YER 224
+ I+ L V+KGD+ D ++A+ +M +THTERRLHQMM AD++
Sbjct: 191 LCHIKQMLGQVMKGDSLDGKTARTDFAMGLTHTERRLHQMMSADKEEEMEVAEEEAALSP 250
Query: 225 MPV-LRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
P + S DY P VTV+N ++ YSVV VQC DR KLLFD VCTLTDMEYVVFHATI
Sbjct: 251 APTSISDSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATI 310
Query: 281 NTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA 340
++ G A+ E+YIRH+DG +++E ERQRV++CLEAA+ RRAS+GVRLEL +DR GLL+
Sbjct: 311 DSEGPNAFQEYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQGVRLELSTQDRIGLLS 370
Query: 341 DVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE 400
DVTR FRENGL+V RAEV+T D A+N+FYVTD G D +++EA+R+++GL+ LKV +
Sbjct: 371 DVTRIFRENGLSVARAEVTTRDDMAVNVFYVTDANGGSVDMRVVEAIREEVGLAILKVTQ 430
Query: 401 --LP--MIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
P M++ ES +++ A SLGS R R LY LGL++SY+
Sbjct: 431 ERFPPKMLHSSPTESADKS-----AARFSLGSFFRSHSERLLYTLGLLKSYT 477
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/465 (54%), Positives = 316/465 (67%), Gaps = 33/465 (7%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKV-------DSARRHGILLEAVQVL 56
MEW L+EYEKLVIRM+TP+VVIDNA CPTATLV+V DSAR G+LLEAVQVL
Sbjct: 1 MEW---LNEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVL 57
Query: 57 TDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-------YGR 109
DL+L I KAYISSDGR+FMDVFHVTD G KLTD SVISYI+QSL +
Sbjct: 58 ADLDLSINKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLAAWNGPVGIDPSAS 117
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ GLT LELTG DR GL+SEVFAVLAD+ C VV+A+ W+H GR+A L+Y++D +
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADV-- 175
Query: 170 PIEDSQQIDRIEARLRNVLKGD------NDIRSAKMTVSMAVTHTERRLHQMMFAD--RD 221
+ RIEARL +L+G +D + +V+H +RRLHQ+M A R+
Sbjct: 176 ---AAAGAARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAARE 232
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
++ D P V+V++WA+R YSVV VQC DR KLL+DVVCTLTDM+YVVFH T++
Sbjct: 233 HDDRRASPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVD 292
Query: 282 T-AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA 340
T A A EFYIR DG+PISS+ E +RV CL+ A+ RR+ EGVRLELC DR GLL+
Sbjct: 293 TSASGGARQEFYIRSADGSPISSDAEMRRVSLCLQDAIERRSFEGVRLELCTPDRPGLLS 352
Query: 341 DVTRTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKIIEAVRQKIGLSNLKVK 399
DVTRTFRENGL V +AEVST+ D A N+FYVT G I+AVR+K+G+ +L V+
Sbjct: 353 DVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRSAIDAVREKVGVDSLVVE 412
Query: 400 ELPMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
E P HQK E+ GG L LG+L +RNLY+LGLI+S+S
Sbjct: 413 ERPPQLHQK-ETRPADRSDGGLGLFYLGNLFKRNLYSLGLIKSFS 456
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/447 (57%), Positives = 312/447 (69%), Gaps = 10/447 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD SVI+YI+QSL T + + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAAAPPEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G R GLLSEVFAVLAD+QC V +A+ W H GR+A + +++ + + ++ RI A
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDPAD-GDGDGRVSRILA 176
Query: 183 RLRNVLKGDNDIRSAKMTVSM--AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RL ++L+GD + + V H +RRLHQ+M AD + P V+VQ
Sbjct: 177 RLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLMSADLHRAAPVPVPVPALAPAVSVQ 236
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
+WA+R YSVV VQC DR KLLFDV CTL DM+YVVFH T++TA RA EFYIR DG+P
Sbjct: 237 SWAERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADGSP 296
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
I SE ER+ + L+AA+ RR+ EGVRLELC DR GLL++VTRTFRENGL V +AEVST
Sbjct: 297 IRSEAEREMLTHHLQAAIERRSLEGVRLELCAPDRAGLLSEVTRTFRENGLLVAQAEVST 356
Query: 361 ERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQK---GESEEQTVG 417
+ D+A N+FYVTD G D I+AVR+++G L V E P Q+ S + G
Sbjct: 357 KGDQACNVFYVTDAAGKAPDRGAIDAVRERVGADRLVVSEEPRPPQQQLYPDASGPGSGG 416
Query: 418 VGGAVLLSLGSLVRRNLYNLGLIRSYS 444
GG L+ LG+LVRRNLYNLGLI+S S
Sbjct: 417 GGGLGLVYLGNLVRRNLYNLGLIKSCS 443
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/453 (53%), Positives = 315/453 (69%), Gaps = 32/453 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-------GL------T 117
DG +FMDVF+VTD NGNK+ D+ VI YI++ LE ++ SF G+ T
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLE-----KNPSFETSMRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVLADL+C+VV A++WTHN R A++++V D +SG IED ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVL----RHST 232
I L NVL+G +D ++AK +S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKG 237
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
+P VTV + +R Y+VV ++ KDR KLLFD+VCTLTDM+YVVFH + T AY EFY
Sbjct: 238 PFPHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFY 297
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLN 352
IRH+DG PISSE ER+R+IQCLEAA+ RRASEG+ LELC EDR GLL+D+TR FREN L
Sbjct: 298 IRHVDGFPISSEAERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLC 357
Query: 353 VTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESE 412
+ RAE+STE +A + FYVTD GNP DPK I+++R++IG + L+VK H S
Sbjct: 358 IKRAEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDTVLQVK------HNSSLSP 411
Query: 413 EQTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
+ G L GS + R+ N LIRSYS
Sbjct: 412 KPPQGTTIGFL--FGSFFKARSFQNFKLIRSYS 442
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/453 (54%), Positives = 312/453 (68%), Gaps = 33/453 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DN T T++KVDSA + G LLE VQVLTD+NL +++AYISS
Sbjct: 12 DEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD NG K + V I+QSL R++SF L T
Sbjct: 72 DGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGP----RASSFRSLRRSVGVQAEAEHTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G I+D ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLA 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST---DYP 235
+I+ L VLKGD D +SA VS+ TH +RRLHQ+M+ADRDY+ ST +
Sbjct: 188 KIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKL 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+VTV + D+ Y+VVN++C DR KLLFD VCTLTDM+YVV+H T+ G AY E+YIRH
Sbjct: 248 LVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRH 307
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG+PISSE ERQRVI CLEAAV RR SEG++LELC EDR GLL+DVTR FRENGL+V R
Sbjct: 308 VDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNR 367
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AEV+T +A+N+FYVTD GNP + IE VR++IGL+ L VK+ ES +
Sbjct: 368 AEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIGLTILHVKDDVCSKPPPQESGK-- 425
Query: 416 VGVGGAVLLSLGSLVRRN----LYNLGLIRSYS 444
SL +L R + LYNLGL++SYS
Sbjct: 426 --------FSLSNLFRSSSEKFLYNLGLMKSYS 450
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/446 (53%), Positives = 304/446 (68%), Gaps = 25/446 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERV----DDDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY E+YI+HIDG
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDG 314
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+P+ S+ ERQRVI CLEAA+ RR SEG++LELC DR GLL++VTR FREN L VTRAEV
Sbjct: 315 SPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 374
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
+T+ +A+N FYV G D K IE++RQ IG + LKVK P ES Q
Sbjct: 375 TTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSP-------ESLPQDSPT 427
Query: 419 GGAVLLSLGSLVRRNLYNLGLIRSYS 444
++ L R+ N GL++SYS
Sbjct: 428 RSSIFSGL--FKSRSFVNFGLVKSYS 451
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/452 (55%), Positives = 317/452 (70%), Gaps = 32/452 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA TATL++VDSA + G LLE VQVLTDLNLLI++AYISS
Sbjct: 11 DEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD +GNKL+++ V I+QSL R SF L T
Sbjct: 71 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGP----RGPSFRSLRRSVDVQGAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSE+FAVLA L+C+VV +++WTHN R+AS++Y+ D +G PI+D ++
Sbjct: 127 IELTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLT 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--YPV 236
+I+ L +L GD D RSA VS+ TH ERRLHQMM+ADRDY+ S
Sbjct: 187 KIKQLLLCILIGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDVDDADCSSASERNRF 246
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
VTV+N D+ Y+VVN++C DR KL+FD VCTLTDM+YVV+HA I G A E++IRH+
Sbjct: 247 VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHM 306
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
DG+PI+SE ERQR+I CLEAA+ RR SEGVRLELC EDR GLL+DVTR FRENGL+VTRA
Sbjct: 307 DGSPINSEAERQRLINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRA 366
Query: 357 EVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTV 416
EV+T +A+N+F+VTD G+P + IEAVR++IGL+ L V + +S Q
Sbjct: 367 EVTTRGSQAVNVFFVTDSSGHPVKSETIEAVRKEIGLTILNVND-----DAYSKSPPQER 421
Query: 417 GVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
G LLSLG++ R + LY+LGLI+S S
Sbjct: 422 G-----LLSLGNIFRSKSEKFLYHLGLIKSNS 448
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/452 (52%), Positives = 316/452 (69%), Gaps = 32/452 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HGILLE VQVLTD+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF-------------NGLT 117
DG +FMDVF+V D +GNK+ D+ VI+YI ++LE R SF T
Sbjct: 63 DGGWFMDVFNVVDGDGNKIRDKGVINYITKTLE-----RDASFVPPMRGTVGVMPSEDHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
++EL+GTDR GLLSEV AVLADL C+VV A++WTHN R A++++V D ++G IED ++
Sbjct: 118 SIELSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDY---ERMPVLRHSTD 233
+I+ L NVLKG+ND+++AKMT+S TH ERRLHQ+MFADRDY ER + + +
Sbjct: 178 SKIKELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGKDKSS 237
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P VTV + ++ Y+V+ ++ KDR KLLFD VCTLTDM+YVVFH ++T AY E+YI
Sbjct: 238 RPHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYI 297
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNV 353
RH+DG P+SS+ ER+RVI+CLEAA+ RRASEG+ LEL EDR GLL+D+TR FREN L +
Sbjct: 298 RHVDGLPMSSDAERERVIECLEAAIERRASEGLELELRTEDRFGLLSDITRVFRENSLCI 357
Query: 354 TRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RAE+STE +A + FYVTD GNP +P+II+++RQ+IG S L+VK + +E
Sbjct: 358 KRAEISTEGGKAKDTFYVTDVTGNPVNPQIIDSIRQQIGHSILQVKNSNL---SPKAPQE 414
Query: 414 QTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
T+ G++ + R L N LIRSYS
Sbjct: 415 TTMS------FLFGNIFKCRTLQNFKLIRSYS 440
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/456 (51%), Positives = 308/456 (67%), Gaps = 24/456 (5%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+Y+ L+ R+N P VVIDN+ C ATLVKVDSA +HGILLE VQVLTDL+L I KAYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSN------------SFNGLTAL 119
G +FMDVFHVTD G+KL D+ +I YI+QSL S S G TA+
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL+G DR GLLSE+ VL + C+VV A+VWTHN R+A ++YV D +G PI+D +++ R
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY----- 234
++ RL VL+GD++ R A S +THTERRLHQMM ADRDY+ +P S +
Sbjct: 192 MKERLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYD-VPSSTSSINAVLDAR 250
Query: 235 --PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
PV++++N ++ YSVV+VQCKDR KLLFD VCTLTDMEYVVFHA+ G AY E+Y
Sbjct: 251 IRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYY 310
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLN 352
IRH+DG + + E++RV++CLEAA+ RR SEG+RLELC DR GLL+DVTR FRE GL+
Sbjct: 311 IRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLS 370
Query: 353 VTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESE 412
VTRA+VST D A+N+FYVTD G K++EA+R +IG + L+VKE +G +E
Sbjct: 371 VTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAE 430
Query: 413 EQTVGVGGAVL----LSLGSLVRRNLYNLGLIRSYS 444
+ S G+L R + LGL++SYS
Sbjct: 431 VAAEVAAAGGMSRSRFSFGNLSERFFHGLGLVKSYS 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D + P+ ++ P + + N + ++V V R +L + V LTD+
Sbjct: 232 RDYDVPSSTSSINAVLDARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEY 291
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLT 117
++ A +DG + +++ ++G L E V+ +E ++E R S GL
Sbjct: 292 VVFHASARADGPYAYQEYYIRHMDGCTLDLDAEQERVVKCLEAAIE-----RRVS-EGLR 345
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
LEL DRVGLLS+V V + SV A V T R ++ YV D SG +
Sbjct: 346 -LELCTRDRVGLLSDVTRVFREKGLSVTRADVSTRGDRAVNVFYVTD-TSGKAV 397
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/481 (50%), Positives = 314/481 (65%), Gaps = 55/481 (11%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQ------------SLETIHYGRS---NSFNG 115
DG +FMDVF+VTD NGNK+ D+ VI YI++ L I+ RS F
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDFTV 122
Query: 116 L--------------------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
L T +ELTGTDR GLLSE+ AVLADL+C+VV A++
Sbjct: 123 LYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTAEI 182
Query: 150 WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM-AVTHT 208
WTHN R A++++V D +SG IED ++ I L NVL+G +D ++AK +S VT+
Sbjct: 183 WTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVTYR 242
Query: 209 ERRLHQMMFADRDYERMPVL----RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDV 264
+RRLHQ+MFADRDYER+ R +P VTV + +R Y+VV ++ KDR KLLFD+
Sbjct: 243 DRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLFDI 302
Query: 265 VCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
VCTLTDM+YVVFH + T AY EFYIRH+DG PISSE ER+R+IQCLEAA+ RRASE
Sbjct: 303 VCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRASE 362
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
G+ LELC EDR GLL+D+TR FREN L + RAE+STE +A + FYVTD GNP DPK I
Sbjct: 363 GMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKSI 422
Query: 385 EAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLIRSY 443
+++R++IG + L+VK H S + G L GS + R+ N LIRSY
Sbjct: 423 DSIRRQIGDTVLQVK------HNSSLSPKPPQGTTIGFL--FGSFFKARSFQNFKLIRSY 474
Query: 444 S 444
S
Sbjct: 475 S 475
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/426 (55%), Positives = 295/426 (69%), Gaps = 24/426 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ + WP EYE L R+N P V IDN CP TL+KVDSA +HGILLE VQ+LTDL+
Sbjct: 1 MESVSWPYFDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L I KAYISSDG +FMDVFHVTD G+KLTDES+I YI+QSL S
Sbjct: 61 LTISKAYISSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRI 120
Query: 111 ---NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
S TA+ELTGTDR GLLSE+ AVL C+VV A+ WTHN R+A ++YV D +S
Sbjct: 121 VGVQSIGEYTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESS 180
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYE--- 223
PIED ++ I+ +L NVLKG++D + K SM +TH ERRLHQ+MFADRDYE
Sbjct: 181 NRPIEDEVRLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSS 240
Query: 224 --RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
P L PV+TV+N ++ YSVVN+QC+DR KLLFD VCTLTDM+YVVFHA+I
Sbjct: 241 DSSNPSLLDENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASIT 300
Query: 282 TAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
A E+YIRH+DG + +E E+ RVI+CLEAA+GRRASEG+ LEL DR GLL+D
Sbjct: 301 CNLPYALQEYYIRHMDGCTLDTEGEKHRVIKCLEAAIGRRASEGLSLELSASDRIGLLSD 360
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPA---DPKIIEAVRQKIGLSN-L 396
VTR FRENGL+VTRA+V+T D+A+N+FYV D GN A D K++EA+R++IG + L
Sbjct: 361 VTRMFRENGLSVTRADVTTRGDKAINVFYVRDASSGNLAINIDMKVVEAMRREIGHTMFL 420
Query: 397 KVKELP 402
+VK +P
Sbjct: 421 QVKNMP 426
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/456 (51%), Positives = 308/456 (67%), Gaps = 24/456 (5%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+Y+ L+ R+N P VVIDN+ C ATLVKVDSA +HGILLE VQVLTDL+L I KAYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSN------------SFNGLTAL 119
G +FMDVFHVTD G+KL D+ +I YI+QSL S S G TA+
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL+G DR GLLSE+ VL + C+VV A+VWTHN R+A ++YV D +G PI+D +++ R
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY----- 234
++ +L VL+GD++ R A S +THTERRLHQMM ADRDY+ +P S +
Sbjct: 192 MKEQLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYD-VPSSTSSINAVLDAR 250
Query: 235 --PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
PV++++N ++ YSVV+VQCKDR KLLFD VCTLTDMEYVVFHA+ G AY E+Y
Sbjct: 251 IRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYY 310
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLN 352
IRH+DG + + E++RV++CLEAA+ RR SEG+RLELC DR GLL+DVTR FRE GL+
Sbjct: 311 IRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLS 370
Query: 353 VTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESE 412
VTRA+VST D A+N+FYVTD G K++EA+R +IG + L+VKE +G +E
Sbjct: 371 VTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAE 430
Query: 413 EQTVGVGGAVL----LSLGSLVRRNLYNLGLIRSYS 444
+ S G+L R + LGL++SYS
Sbjct: 431 VAAEVAAAGGMSRSRFSFGNLSERFFHGLGLVKSYS 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D + P+ ++ P + + N + ++V V R +L + V LTD+
Sbjct: 232 RDYDVPSSTSSINAVLDARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEY 291
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLT 117
++ A +DG + +++ ++G L E V+ +E ++E R S GL
Sbjct: 292 VVFHASARADGPYAYQEYYIRHMDGCTLDLDAEQERVVKCLEAAIE-----RRVS-EGLR 345
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
LEL DRVGLLS+V V + SV A V T R ++ YV D SG +
Sbjct: 346 -LELCTRDRVGLLSDVTRVFREKGLSVTRADVSTRGDRAVNVFYVTD-TSGKAV 397
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/456 (51%), Positives = 312/456 (68%), Gaps = 35/456 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-------GL------T 117
D +FMDVF+V D NGNK+ D+ VI YI++ LE + SF G+ T
Sbjct: 63 DAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLEN-----NPSFAPSLRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DL C+VV A++WTHN R A++++V D +SG I+D ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVL-------R 229
I L NVL+G ND ++A+ T+S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDR 237
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P VTV + ++ Y+VV ++ +DR KLLFD+VCTLTDM+YVVFH + T A+
Sbjct: 238 DKRPLPHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQ 297
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFREN 349
EFYIRH+DG PISSE ER+R++QCLEAA+ RRASEG+ LELC EDR GLL+D+TR FREN
Sbjct: 298 EFYIRHVDGFPISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFREN 357
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKG 409
L + RAE+STE +A + FYVTD GNP DPKII+++R++IG LKVK + +
Sbjct: 358 SLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKP- 416
Query: 410 ESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
S+ T+G LG+ + R+ N LIRSYS
Sbjct: 417 -SQPTTIG------FLLGNFFKARSFQNFKLIRSYS 445
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/455 (52%), Positives = 304/455 (66%), Gaps = 35/455 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVK-----VDSARRHGILLEAVQVLTDLNLLIKKA 66
EY+ L +R++ P VVIDN CP ATL+K VDS +HGILLE VQVLTDL+L I KA
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----------YGRSNSFNG- 115
YISSDG +FMDVFHVTD GNKL DE +I YI+QSL GR S
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSLRSN 125
Query: 116 --LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLS++ VL D+ C+VV A+VWTHN R+A ++YV D +G PIED
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM---FADRDYERMPVLRH 230
+++ I+ARL L+GD + +K + MAV HTERRLHQ+M FA E
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSADFAAIQPESTNTFVA 245
Query: 231 STDY--PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ D P ++VQN A++ YSVVNV+CKDR KLLFD VCTLTDM+YVVFHA I + G AY
Sbjct: 246 AADKTRPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAY 305
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRE 348
E+YIR +DG + SE E++ V++CLEAA+ RR G+RLELC +DR GLL+DVTR FRE
Sbjct: 306 QEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIFRE 365
Query: 349 NGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKEL-PMIYHQ 407
NGL+VTRA+VST+ D+A+N+FYVTD GNP D +I+EA R++IG S L+VK+L P +
Sbjct: 366 NGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSPNS 425
Query: 408 KGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
+ E V S G+ LY+LGLI S
Sbjct: 426 QHE-------VASKSRFSFGTF----LYSLGLINS 449
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/455 (52%), Positives = 304/455 (66%), Gaps = 35/455 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVK-----VDSARRHGILLEAVQVLTDLNLLIKKA 66
EY+ L +R++ P VVIDN CP ATL+K VDS +HGILLE VQVLTDL+L I KA
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----------YGRSNSFNG- 115
YISSDG +FMDVFHVTD GNKLTDE +I YI+QSL GR S
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSLRSN 125
Query: 116 --LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLS++ VL D+ C+VV A+VWTHN R+A ++YV D +G PIED
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM---FADRDYERMPVLRH 230
+++ I+ARL L+GD + +K + MAV HTERRLHQ+M FA E
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSADFAAIQPESTNTFVA 245
Query: 231 STDY--PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ D P ++VQN A++ YSVVNV+C DR KLLFD VCTLTDM+YVVFHA I + G AY
Sbjct: 246 AADKTRPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAY 305
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRE 348
E+YIR +DG + SE E++ V++CLEAA+ RR G+RLELC +DR GLL+DVTR FRE
Sbjct: 306 QEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIFRE 365
Query: 349 NGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKEL-PMIYHQ 407
NGL+VTRA+VST+ D+A+N+FYVTD GNP D +I+EA R++IG S L+VK+L P +
Sbjct: 366 NGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSPNS 425
Query: 408 KGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
+ E V S G+ LY+LGLI S
Sbjct: 426 QHE-------VASKSRFSFGTF----LYSLGLINS 449
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/449 (53%), Positives = 309/449 (68%), Gaps = 21/449 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR++G+LLEAV L+D + ++K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHY-----------GRSNSFN-GLTA 118
GR+FMDVFHVTD G K+ D + +++ +E SL S + N GL+
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
LEL G DR GLLSEVFAVL DL+CS+V+AK WTH GR+A+L++V+D ++G+PI+D+ +
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RIE+RLR VL+G + + AV + +RRLHQ++ DR+ + P + D P T
Sbjct: 190 RIESRLRYVLRGGARGARTILVDAAAVGNLDRRLHQLLNEDREADGRP----AADRPTTT 245
Query: 239 ---VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VQ W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR
Sbjct: 246 AVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 305
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG PISS ERQRVIQ L+AA+ RRASEGVRLEL ++DR+GLLA VTR FREN L+VT
Sbjct: 306 LDGQPISSAAERQRVIQRLQAAIERRASEGVRLELSIKDRRGLLAYVTRVFRENSLSVTH 365
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AE++T D+ALN+F+VTD G PADPK I+ V IG +L+V E + +
Sbjct: 366 AEITTRGDKALNVFHVTDVAGRPADPKAIDEVIHGIGTESLRVDEERWPRLCSTQGDAGR 425
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
G G L SLGSLV++NLYNLGLIRS S
Sbjct: 426 DGGAGGGLFSLGSLVKKNLYNLGLIRSCS 454
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/458 (51%), Positives = 310/458 (67%), Gaps = 39/458 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF-------------NGLT 117
DG +FMDVF+V D GNK+ D+ VI YI++ LE + SF T
Sbjct: 63 DGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLEN-----NPSFVPSLRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DL C+VV A++WTHN R A++++V D +SG I+D ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVL-------R 229
I L NVL+G ND ++A+ T+S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDR 237
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P VTV + ++ Y+VV ++ +DR KLLFD+VCTLTDM+YVVFH + T A+
Sbjct: 238 DKRPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQ 297
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFREN 349
EFYIRH+DG PISSE ER+R++QCLEAA+ RRASEG+ LELC EDR GLL+D+TRTFREN
Sbjct: 298 EFYIRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFREN 357
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKG 409
L + RAE+STE +A + FYVTD GNP DPKII+++R++IG LKVK H
Sbjct: 358 SLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVK------HNSN 411
Query: 410 ESEE--QTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
S + Q +G LG+ + R+ N LI+SYS
Sbjct: 412 LSPKPPQPTTIG----FLLGNFFKARSFQNFKLIKSYS 445
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 291/416 (69%), Gaps = 31/416 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 17 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 77 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRXAVGVEPS 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 132 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 191
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------P 226
++++ RI+ RL NV +G + R AK V + TH ERRLHQMMF DRDYER
Sbjct: 192 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 249
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 250 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 309
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTF 346
AY ++YIRHIDG P++SE ER+R+IQCLEAA+ RR SEG++LEL DR GLL+DVTR F
Sbjct: 310 AYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIF 369
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
RENGL VTRAEVST DEA+N FYV D G+ + + +EA+RQ+IG + L+VK P
Sbjct: 370 RENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 425
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 291/416 (69%), Gaps = 31/416 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 17 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 77 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPS 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 132 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 191
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------P 226
++++ RI+ RL NV +G + R AK V + TH ERRLHQMMF DRDYER
Sbjct: 192 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 249
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 250 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 309
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTF 346
AY ++YIRHIDG P++SE ER+R+IQCLEAA+ RR SEG++LEL DR GLL+DVTR F
Sbjct: 310 AYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIF 369
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
RENGL VTRAEVST DEA+N FYV D G+ + + +EA+RQ+IG + L+VK P
Sbjct: 370 RENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 425
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 291/416 (69%), Gaps = 31/416 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 18 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 77
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 78 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPS 132
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 133 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 192
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------P 226
++++ RI+ RL NV +G + R AK V + TH ERRLHQMMF DRDYER
Sbjct: 193 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 250
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 251 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 310
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTF 346
AY ++YIRHIDG P++SE ER+R+IQCLEAA+ RR SEG++LEL DR GLL+DVTR F
Sbjct: 311 AYQDYYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIF 370
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
RENGL VTRAEVST DEA+N FYV D G+ + + +EA+RQ+IG + L+VK P
Sbjct: 371 RENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 426
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/447 (52%), Positives = 307/447 (68%), Gaps = 22/447 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA RHGILL+ VQVLTDLNL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+VTD +GNKL DE +++Y++++LET G NS G T++EL
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLET-EAGFLNSLRGSVGVMPSKEDTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG+DR GLLSEV AVL DL+C+VV A++WTHN R A++I+V D +G IED +++ I+
Sbjct: 122 TGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RL NV KG++ R+ KMT+S + +RRLHQMMFA RD+ER+ ++ P VT
Sbjct: 182 KRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYVQDKNSRPHVT 241
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V + +DR Y+VV ++ +DR KLLFD VC LTDM+YVVFH T+ T AY E YIRH+DG
Sbjct: 242 VLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVDG 301
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
P+ SE ERQRV +CLEAA+ RRA EG+ LEL EDR GLL+DVTR FRENGL + RA +
Sbjct: 302 LPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVI 361
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
+T+ +A + F+VTD GN D K +E +RQ+IG + L+VK + + K E
Sbjct: 362 TTKCGKAKDTFFVTDVSGNTVDSKTVEMIRQQIGQTILRVKG-NLNFSPKLPQE------ 414
Query: 419 GGAVLLSLGSLVR-RNLYNLGLIRSYS 444
G G+L + R+ LI+SYS
Sbjct: 415 -GTRSFPFGNLFKGRSFQTFKLIKSYS 440
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/447 (52%), Positives = 307/447 (68%), Gaps = 22/447 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA RHGILL+ VQVLTDLNL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+VTD +GNKL DE +++Y++++LET G NS G T++EL
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLET-EAGFLNSLRGSVGVMPSKEDTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG+DR GLLSEV AVL DL+C+VV A++WTHN R A++I+V D +G IED +++ I+
Sbjct: 122 TGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RL NV KG++ R+ KMT+S + +RRLHQMMFA RD+ER+ + + P VT
Sbjct: 182 KRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYAQDTNSRPHVT 241
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V + +DR Y+VV ++ +DR KLLFD VC LTDM+YVVFH T+ T AY E YIRH+DG
Sbjct: 242 VLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVDG 301
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
P+ SE ERQRV +CLEAA+ RRA EG+ LEL EDR GLL+DVTR FRENGL + RA +
Sbjct: 302 LPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVI 361
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
+T+ +A + F+VTD GN D K +E +RQ+IG + L+VK + + K E
Sbjct: 362 TTKCGKAKDTFFVTDVSGNXVDSKTVEMIRQQIGQTILRVKG-NLNFSPKLPXE------ 414
Query: 419 GGAVLLSLGSLVR-RNLYNLGLIRSYS 444
G G+L + R+ LI+SYS
Sbjct: 415 -GTRSFXFGNLFKGRSFQTFKLIKSYS 440
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/403 (55%), Positives = 288/403 (71%), Gaps = 23/403 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C A++++VDSA +HGILLE VQVL DLNL+I KAYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL--------TALELT 122
DG +FMDVF+VTD +GNK+TDE ++ YI++SL + S+ + T++ELT
Sbjct: 63 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 122
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G+DR GLLSEV AVL L+CSVV A+VWTHN R A++++V D +G I D +++ +++
Sbjct: 123 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 182
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YPVVTV 239
L N+ ++ VTHTERRLHQMMFADRDYER + +D P V V
Sbjct: 183 LLCNL----------RLWSLHGVTHTERRLHQMMFADRDYER--IYNDGSDEAQRPNVNV 230
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
NW D+ YSVV ++ KDR KLLFD VCTLTDM+YVVFHA ++ G AY E+YIRHIDG+
Sbjct: 231 VNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGS 290
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
P+ S+ ERQRVIQCLEAA+ RR SEG++LELC DR GLL+DVTR FREN L+VTRAEV+
Sbjct: 291 PVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVT 350
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
T +A+N F+V D G P D K I+++R+ IG + L+VK P
Sbjct: 351 TRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSP 393
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 310/440 (70%), Gaps = 15/440 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 189
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 190 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 245
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR DG PISSE E
Sbjct: 246 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAE 305
Query: 307 RQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
RQ VI+CL+AA+ RRASEGVRLEL + DR+GLLA VTR FRENGL+VT AE++T D A+
Sbjct: 306 RQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAM 365
Query: 367 NIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGVGGAVLL 424
N+F+VTD G PADPK I+ V Q+IG +L+V E P + +G++ + G L
Sbjct: 366 NVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSAEGDAAGRGG---GGGLF 422
Query: 425 SLGSLVRRNLYNLGLIRSYS 444
SLGSLV++NL++LGLIRS S
Sbjct: 423 SLGSLVKKNLFSLGLIRSCS 442
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/428 (53%), Positives = 292/428 (68%), Gaps = 21/428 (4%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD 91
C AT+++VDSA +GILLE VQ+LTDLNL I KAYISSDG +FMDVF+VTD +GNK+TD
Sbjct: 4 CKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTD 63
Query: 92 ESVISYIEQSL-ETIHYGRSNSFNGL------TALELTGTDRVGLLSEVFAVLADLQCSV 144
E V+ YI++SL + S G+ T +ELTG DR GLLSE+ AVL L+CSV
Sbjct: 64 EVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLKCSV 123
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
+ A++WTHN R A+++ V D +G I D +++ RI+ LRNVLKG N R AK VS
Sbjct: 124 LNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVVSHG 183
Query: 205 VTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
HT+RRLHQMMF DRDYE V ++ P V V NW D+ YSVV V+CKDR K
Sbjct: 184 EVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPK 243
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
LLFD VCTLTDM+YVVFH +++T G A+ E+Y+RHIDG+P+ SE E+QRVIQCLEAA+
Sbjct: 244 LLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLEAAIK 303
Query: 320 RRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA 379
RR SEG++LELC DR GLL++VTR FREN L VTRAEV T+ +ALN FYV+D G
Sbjct: 304 RRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDASGYSI 363
Query: 380 DPKIIEAVRQKIGLSNLKVKELPMIYHQKGES---EEQTVGVGGAVLLSLGSLVRRNLYN 436
D K I+++RQ IG + LKVK P Q+ +S E T + G + S ++ N
Sbjct: 364 DAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFLFGGLFKS------KSFVN 417
Query: 437 LGLIRSYS 444
GL+RSYS
Sbjct: 418 FGLVRSYS 425
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 335
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 336 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 385
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 303/440 (68%), Gaps = 30/440 (6%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN PRV IDN CP AT++ VDSA ++G+LLE VQVLTDL L++KKAYISSDG +FMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 80 HVTDLNGNKLTDESVISYIEQSL---------------ETIHYGRSNSFNGLTALELTGT 124
+VT+ G+K+ DESV+ I+ + I S+ + T +ELTGT
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDY---TLIELTGT 117
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVL +L+C+VV A++WTHN R A+++ V D SG I D++++ RI+ RL
Sbjct: 118 DRPGLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERL 177
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS-TDYPVVTVQNWA 243
NV KG + R AK TV+M +THTERRLHQMM DRDY+R R S + +V+V NW
Sbjct: 178 CNVFKGRS--RDAKTTVAMGITHTERRLHQMMLEDRDYDRHDKDRASGSPTSMVSVVNWL 235
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+ YSVV ++CKDR KLLFD VCTLTDM+YVVFH +++T G AY ++YIRHIDG+P++S
Sbjct: 236 QKDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSPVNS 295
Query: 304 EPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD 363
E ER+R+I CLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VTRAEVST+ D
Sbjct: 296 EAERKRIIHCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTKGD 355
Query: 364 EALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL 423
+A+N FYV D G+ + K +EA+RQ+IG + L+VK P + +++
Sbjct: 356 KAINTFYVRDAAGSSVELKTLEAIRQEIGQTVLQVKGHP--------DQPKSLTQESPTR 407
Query: 424 LSLGSLVR-RNLYNLGLIRS 442
SL R R+L NLGLI S
Sbjct: 408 FLFSSLFRPRSLCNLGLIGS 427
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/449 (51%), Positives = 312/449 (69%), Gaps = 27/449 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVLTD+NL+I KAYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+V D +G K+ D+ V+ YI++ LE+ + + S G TA+EL
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLES-NASFAPSLRGSVGVMPSEEHTAIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVL DL C+VV A++WTHN R A++++V D ++G I+D +++ I
Sbjct: 122 TGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIR 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYER-----MPVLRHSTDYP 235
L NVLKG++D ++A T+S VT ERRLHQ+MFADRDYER + + P
Sbjct: 182 ELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRP 241
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VTV N +R Y+VV+++ KDR KLLFD+VCTLTDMEYVVFH ++T AY EFYIRH
Sbjct: 242 HVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRH 300
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG P+SS+ ER+RV+QCLEAA+ RRASEG+ LELC EDR GLL+D+TR FREN L + R
Sbjct: 301 VDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQT 415
AE+ T+ +A + FYVTD GNP DPKII+++ ++IG + L VK ++ + +E T
Sbjct: 361 AEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKP--PQETT 418
Query: 416 VGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+G G+L + + LIRSYS
Sbjct: 419 MG------YIFGNLFKARTFK--LIRSYS 439
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/457 (49%), Positives = 315/457 (68%), Gaps = 31/457 (6%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEY KL+ RMN+PRVVIDN C AT+V+VD+ R+G LL+ VQVLTDLNL+I KAYIS
Sbjct: 5 VDEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYIS 64
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE----TIHYGRSN----SFNGLTALEL 121
SDG +FMDVF+VT +GNK+ DES+++YI+++LE ++ RS+ T++EL
Sbjct: 65 SDGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIEL 124
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
+GTDR GLLSEV AVL DL CSVV A++WTHN R+A+++++ + ++G +E+ +++ I+
Sbjct: 125 SGTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIK 184
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
LRNVLKG++ RS K+++S TH RRLHQMMFA RD+ER+ + P V V
Sbjct: 185 ELLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESAKEKGVEPCVIVS 244
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
+ AD+ Y+VV V+C DR KLLFD V LTDM+YVVFH T+ T G+ AY E+YIRH+DG P
Sbjct: 245 DCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVDGLP 304
Query: 301 ISSEPERQRVIQCLEAAVGRRASE-----------GVRLELCMEDRQGLLADVTRTFREN 349
ISSE ERQRV +CLEAA+ RRASE G+ LELC +DR GLL+D+TR FREN
Sbjct: 305 ISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDITRIFREN 364
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK-ELPMIYHQK 408
GL++ RAE+ST+ +A + F+VTD GN DP + +R++IG + L K +L ++
Sbjct: 365 GLSIQRAEISTKNGKAKDTFFVTDVAGNSVDPTTVRMIREQIGQTILHAKGKLNVLSKFP 424
Query: 409 GESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
E+ + GS + R+ ++ GL++SYS
Sbjct: 425 QETPRSFL---------FGSFFKGRSFHHFGLVKSYS 452
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 219 DRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
D D + L + P V + N A ++V V +R L VV LTD+ ++ A
Sbjct: 2 DDDVDEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKA 61
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEP---------ERQ-RVIQCLEAAVGRRAS-EGVR 327
I++ G FY+ DG + E ER V+ + +++ S E
Sbjct: 62 YISSDGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTS 121
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA--DPKIIE 385
+EL DR GLL++V+ + G +V AE+ T I ++T++ A +PK +
Sbjct: 122 IELSGTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLS 181
Query: 386 AVRQ 389
+++
Sbjct: 182 LIKE 185
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/442 (51%), Positives = 303/442 (68%), Gaps = 21/442 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR+HG+LLEAV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDESVI-------SYIEQSLETIHYGRSNSFNGLTALELTGT 124
GR+FMDVFHVTD G K+ D S + + + T LEL G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPTLLELVGA 129
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEVFAVL DL+C + +A+ WTH GR+A+L++V+D ++G+PI+D+ ++ R+E+RL
Sbjct: 130 DRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRVESRL 189
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
R+VL+G + + + A + +RRLHQ++ D + E + V VQ+W +
Sbjct: 190 RHVLRG-GALGARMVRADAAAVNMDRRLHQLLNEDGEAES-----RADQATAVAVQDWGE 243
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
R YSV+ V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR +DG PISS
Sbjct: 244 RGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSA 303
Query: 305 PERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDE 364
ER+RVIQCL+AA+ RRASEGVRLEL + DR+GLLA VTR FREN L+VT AE++T D
Sbjct: 304 AERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTRGDM 363
Query: 365 ALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGVGGAV 422
A+N+F+VTD G PADPK I+ V Q+IG +L+V E P + +G++ G GGA
Sbjct: 364 AMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCLTEGDA-----GRGGAG 418
Query: 423 LLSLGSLVRRNLYNLGLIRSYS 444
+ SLGSLV++NL +LGLIRS S
Sbjct: 419 IFSLGSLVKKNLASLGLIRSCS 440
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 308/446 (69%), Gaps = 21/446 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR+HG+LLEAV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSL----------ETIHYGRSNSFNGLTALE 120
GR+FMDVFHVTD +G K+ D +++++ +E SL G T LE
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMPTLLE 129
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
L G DR GLLSEVFAVL DL+C + +A+ WTH GR+A+L++V+D +G+PI+D+ ++ R+
Sbjct: 130 LVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRRV 189
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
E+RLR+VL+G + + + A + +RRLHQ++ D + E D V VQ
Sbjct: 190 ESRLRHVLRG-GALGARMVREDAAAVNMDRRLHQLLNEDGEAE---CRADQADATAVAVQ 245
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
+W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR +DG P
Sbjct: 246 DWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRP 305
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
ISS ER+RVIQCL+AA+ RRASEGVRLEL + DR+GLLA VTR FREN L+VT AE++T
Sbjct: 306 ISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITT 365
Query: 361 ERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGV 418
D+A+N+F+VTD G PADPK I+ V Q+IG +L+V E P + +G++
Sbjct: 366 RGDKAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGG-- 423
Query: 419 GGAVLLSLGSLVRRNLYNLGLIRSYS 444
GA + SLGSLV++NL +LGLIRS S
Sbjct: 424 -GAGIFSLGSLVKKNLASLGLIRSCS 448
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/399 (55%), Positives = 288/399 (72%), Gaps = 10/399 (2%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSN----SFNGLTALEL 121
DG +FMDVF V D +GNK+ D V+ YI++ +E+ I RS+ + TA+EL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIEL 123
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVL DL C+VV A++WTHN R A++I+V D + S I D ++ I+
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTIK 183
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L NV++ ++ R+AK S + TH ERRLHQ+MF DRDYE + + S P VT+ N
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRAKTSASRPSVTLMN 243
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
++ Y+VV ++ KDR KL+FDVVCTLTDM+YVVFH ++T AY EFYIRH+DG PI
Sbjct: 244 -IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
+SE E++RVIQCLEAA+ RRASEG+ LEL EDR GLL+D+TRTFREN L + RAE+ST
Sbjct: 303 NSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEISTR 362
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE 400
+A + FYVTD GNP + KI+E++RQ+IG+S LKVK+
Sbjct: 363 EGKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKK 401
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/407 (55%), Positives = 285/407 (70%), Gaps = 31/407 (7%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISSDG +FMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 80 HVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF-------------NGLTALELT 122
VT+ +G+K+TDESV+ YI +S+ G + F + T +ELT
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPSSDHTLIELT 115
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D++++ RI+
Sbjct: 116 GTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKG 175
Query: 183 RLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------PVLRHSTDYP 235
RL NV +G + R AK V + TH ERRLHQMMF DRDYER S P
Sbjct: 176 RLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGP 233
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G AY ++YIRH
Sbjct: 234 VVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRH 293
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
IDG P++SE ER+R+IQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VTR
Sbjct: 294 IDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTR 353
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
AEVST DEA+N FYV D G+ + + +EA+RQ+IG + L+VK P
Sbjct: 354 AEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 400
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/451 (51%), Positives = 312/451 (69%), Gaps = 29/451 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVLTD+NL+I KAYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQ--SLETIHYGRSNSFNGL---------TAL 119
DG +FMDVF+V D +G K+ D+ V+ YI++ LE+ + + S G TA+
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLES-NASFAPSLRGSVGVMPSEEHTAI 121
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
ELTGTDR GLLSEV AVL DL C+VV A++WTHN R A++++V D ++G I+D +++
Sbjct: 122 ELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLST 181
Query: 180 IEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYER-----MPVLRHSTD 233
I L NVLKG++D ++A T+S VT ERRLHQ+MFADRDYER + +
Sbjct: 182 IRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSS 241
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P VTV N +R Y+VV+++ KDR KLLFD+VCTLTDMEYVVFH ++T AY EFYI
Sbjct: 242 RPHVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYI 300
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNV 353
RH+DG P+SS+ ER+RV+QCLEAA+ RRASEG+ LELC EDR GLL+D+TR FREN L +
Sbjct: 301 RHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCI 360
Query: 354 TRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RAE+ T+ +A + FYVTD GNP DPKII+++ ++IG + L VK ++ + +E
Sbjct: 361 KRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKP--PQE 418
Query: 414 QTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
T+G G+L + + LIRSYS
Sbjct: 419 TTMG------YIFGNLFKARTFK--LIRSYS 441
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/439 (53%), Positives = 301/439 (68%), Gaps = 33/439 (7%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +DN T T++KVDSA + G LLE VQVLTD+NL +++AYISSDG +FMDVFHVTD
Sbjct: 132 VAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDP 191
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TALELTGTDRVGLLSE 132
NG K + V I+QSL R++SF L T +ELTG DR GLLSE
Sbjct: 192 NGKKFMQDDVADRIQQSLGP----RASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN 192
VFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G I+D ++ +I+ L VLKGD
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 193 DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST---DYPVVTVQNWADRSYSV 249
D +SA VS+ TH +RRLHQ+M+ADRDY+ ST + +VTV + D+ Y+V
Sbjct: 308 DKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTV 367
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQR 309
VN++C DR KLLFD VCTLTDM+YVV+H T+ G AY E+YIRH+DG+PISSE ERQR
Sbjct: 368 VNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQR 427
Query: 310 VIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIF 369
VI CLEAA+ RR SEG++LELC EDR GLL+DVTR FRENGL+V RAEV+T +A+N+F
Sbjct: 428 VIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMNVF 487
Query: 370 YVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSL 429
YVTD GNP + + IEAVR++IGL+ L VK+ ES + SL +L
Sbjct: 488 YVTDVSGNPVNSETIEAVRKEIGLTILHVKDDVCSKPPPQESGK----------FSLSNL 537
Query: 430 VRRN----LYNLGLIRSYS 444
R + LYNLGL++SYS
Sbjct: 538 FRSSSEKFLYNLGLMKSYS 556
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 212 LHQMMFADRDYERMPV------LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDV 264
H F + E +P+ RH PV V V N + R+ +V+ V ++ L +V
Sbjct: 100 FHIAGFPEAPLESLPIETPSTLHRHKPWDPVLVAVDNISSRTDTVIKVDSANKRGSLLEV 159
Query: 265 VCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEA-------- 316
V LTDM V A I++ GE F++ +G + R+ Q L
Sbjct: 160 VQVLTDMNLSVRRAYISSDGEWFMDVFHVTDPNGKKFMQDDVADRIQQSLGPRASSFRSL 219
Query: 317 --AVGRRA-SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+VG +A +E +EL DR GLL++V + NV AEV T ++ Y+TD
Sbjct: 220 RRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITD 279
Query: 374 EMGNPA--DPKIIEAVRQ 389
E + DP + ++Q
Sbjct: 280 EATGLSIDDPDRLAKIKQ 297
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 284/393 (72%), Gaps = 10/393 (2%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSN----SFNGLTALEL 121
DG +FMDVF V D +GNK+ D V+ YI++ +E+ I RS+ + T++EL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIEL 123
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVL DL C+VV A++WTHN R A++I+V D ++ S I D ++ I+
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTIK 183
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L NV++ ++ R+AK S + TH ERRLHQ+MF DRDYE + R S P VT+ N
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRARTSASRPSVTLMN 243
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
++ Y+VV ++ KDR KL+FDVVCTLTDM+YVVFH ++T AY EFYIRH+DG PI
Sbjct: 244 -IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
+SE E++RVIQCLEAA+ RRASEG+ LEL EDR GLL+D+TRTFREN L + RAE+ST
Sbjct: 303 NSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEISTR 362
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS 394
+A + FYVTD GNP + KI+E++RQ+IG+S
Sbjct: 363 EGKAKDTFYVTDVTGNPVESKIVESIRQQIGVS 395
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/418 (52%), Positives = 288/418 (68%), Gaps = 17/418 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N PRV +DN C +TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MASVCWPYFDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL------ETIHYGRS---- 110
L+I KAYISSDG +FMDVFHVTD G K+TD I YIE++L E +
Sbjct: 61 LIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGV 120
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+S G TA+EL G DR GLLSE+ AVLA+L +VV A+VWTHN RIA ++YV D +
Sbjct: 121 HSVGGHTAIELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRA 180
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ D ++ +E +L+N+L+G + + + + SM TH +RRLHQM+FADRDYE ++
Sbjct: 181 VADPTRLSIMEDQLKNILRGCENDEAGRTSFSMGFTHVDRRLHQMLFADRDYEG-GIVAT 239
Query: 231 STDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
DYP +TV+ D+ YSVV V+CKDR KL+FD+VCTLTDM+YVVFHATI++ G
Sbjct: 240 EVDYPPSIKPKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGP 299
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
A E+YIRH+DG + +E E++RVI+CLEAA+ RR SEG+ LELC +DR GLL++VTR
Sbjct: 300 HASQEYYIRHMDGCVLDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRI 359
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKELP 402
RENGL V+RA V T ++A N+FYV D GNP D KIIEA+R++IG + L VK+ P
Sbjct: 360 LRENGLAVSRAGVMTIGEQATNVFYVRDASGNPVDTKIIEALRKEIGHTMMLNVKKTP 417
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 302/446 (67%), Gaps = 20/446 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY+KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVL D+NL+I KAYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------TALELTGT 124
DG +FMDVF+V GNK+ D+ VI+ I+ LE G+ T++EL+GT
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGT 122
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVLADL C+VV A VWTHN R A++++V D +G I D Q++ I+ L
Sbjct: 123 DRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELL 182
Query: 185 RNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTD----YPVVTV 239
NVL+G+ +++ AKMT+S VT T+RRLHQ+M ADRDYER + + P VTV
Sbjct: 183 CNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTV 242
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
+ ++ Y+++ + +DR KLLFDV+CTLTDMEYVVFH + T A+LEFYIRH DG
Sbjct: 243 FDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRHKDGL 302
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
PISS+ ER RV+ CLEAA+ RR SEG++LELC EDR GLL+D+TR FREN L + RAE++
Sbjct: 303 PISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRRAEIA 362
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVG 419
T+R +A +IFYVTD G D K++E++R++IG + L+VK + + +E T G
Sbjct: 363 TKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCL--SETPPKEMTAG-- 418
Query: 420 GAVLLSLGSLVR-RNLYNLGLIRSYS 444
LG + R N LIRSYS
Sbjct: 419 ----FFLGYFFKARTFQNFKLIRSYS 440
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 301/466 (64%), Gaps = 37/466 (7%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEY+KLV+RMN PRV +DN TATLVKVDS ++G LLE VQVLTDL L I +AYIS
Sbjct: 17 VDEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYIS 76
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 77 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGA----GSLSFRGPPERLVAVEAEAEE 132
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVL DL+C++V ++VWTH+GR+A+L+YV D ++ IED
Sbjct: 133 AQTTIELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDP 192
Query: 175 QQIDRIEARLRNVLKGDN-DIRSAKMTVSMAVTHTERRLHQMMFADRDY----------- 222
++D ++ LR+VL+G + D ++++ +S V H RRLHQMM ADR
Sbjct: 193 ARLDTVKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVG 252
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
ER PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 253 ERGEASGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIA 312
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G AY E+YIRH+D + S +R R+ +CLEAA+ RR +EG+RLELC EDR GLL+DV
Sbjct: 313 EGSEAYQEYYIRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTEGLRLELCCEDRVGLLSDV 372
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
TR FRE+GL+VT AEV T +A N+FYV D G P ++AVR +IG L V+E
Sbjct: 373 TRIFREHGLSVTHAEVDTRGAQAANVFYVVDASGEPVQGHAVDAVRAEIGEQFLFVREQH 432
Query: 403 MIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
G + VG GG SLG+++R + LYNLGLIRS S
Sbjct: 433 DAAAGAGAGPKSPVGGGGR--RSLGNMIRSRSEKFLYNLGLIRSCS 476
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/425 (50%), Positives = 290/425 (68%), Gaps = 18/425 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N PRV +DN C TL+KVDS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
+I KAYISSDG +FMD+FHVTD G K+ D I YIE++L Y +
Sbjct: 61 FIITKAYISSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSVGDYTAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTC 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
P++D ++ +E +L+N+L+G ++D ++++ + SM TH +RRLHQM FADRDYE V
Sbjct: 181 RPVDDPTRLSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEGGGV 240
Query: 228 LRH----STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
S+ P +TV+ ++ YSVV+V CKDR KLLFD+VCTLTDM+YVVFHATI++
Sbjct: 241 TNEVEYPSSFKPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSD 300
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G A E+YIRH+DG + +E E++RVI+CLEAA+ RR EG+ LELC +DR GLL++VT
Sbjct: 301 GPYASQEYYIRHMDGCTLDTEGEKERVIKCLEAAIRRRVCEGLSLELCAKDRVGLLSEVT 360
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKELP 402
R RENGL+VTRA V+T ++A+N+FYV D GNP D K IEA+R++IG + L VK+ P
Sbjct: 361 RVLRENGLSVTRAGVTTVGEQAMNVFYVRDSSGNPVDMKTIEALRKEIGHTMMLNVKKTP 420
Query: 403 MIYHQ 407
+ Q
Sbjct: 421 VSASQ 425
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/403 (55%), Positives = 282/403 (69%), Gaps = 31/403 (7%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISSDG +FMDVF VT+
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 84 LNGNKLTDESVIS----YIEQSLETIHYGRSNSF-------------NGLTALELTGTDR 126
+G+K+TDESV+ YI +S+ G + F + T +ELTGTDR
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPSSDHTLIELTGTDR 126
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D++++ RI+ RL N
Sbjct: 127 PGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYN 186
Query: 187 VLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------PVLRHSTDYPVVTV 239
V +G + R AK V + TH ERRLHQMMF DRDYER S PVV+V
Sbjct: 187 VFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSV 244
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G AY ++YIRHIDG
Sbjct: 245 VNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGC 304
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
P++SE ER+R+IQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VTRAEVS
Sbjct: 305 PVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVS 364
Query: 360 TERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
T DEA+N FYV D G+ + + +EA+RQ+IG + L+VK P
Sbjct: 365 TRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP 407
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/455 (51%), Positives = 294/455 (64%), Gaps = 34/455 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 3 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDY---T 119
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 120 VVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 179
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K TVS A+ THT+R+LHQ+MFADRDY+
Sbjct: 180 SKIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 239
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G +A
Sbjct: 240 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 299
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFR 347
Y E+YIRH DG+P+ SE ERQRVI+CL+AA+ RR SEG++LELC DR GLL+DVTR FR
Sbjct: 300 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 359
Query: 348 ENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQ 407
EN L VTRAEV T+ D+ALN FYV D G D K IE++RQ IG + L+VK
Sbjct: 360 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVK-------- 411
Query: 408 KGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
G ++ + G R+ N GLIRS
Sbjct: 412 GGNTDAKPSPQDSPTGFLFGVFKSRSFVNFGLIRS 446
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/455 (51%), Positives = 293/455 (64%), Gaps = 34/455 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 13 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDY---T 129
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 130 VIELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 189
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K VS A+ THT+R+LHQ+MFADRDY+
Sbjct: 190 SKIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G A
Sbjct: 250 DKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEA 309
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFR 347
Y E+YIRH DG+P+ SE ERQRVI+CL+AA+ RR SEG++LELC DR GLL+DVTR FR
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 348 ENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQ 407
EN L VTRAEV T+ D+ALN FYV D G D K IE++RQ IG + L+VK
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQVIGQTILQVK-------- 421
Query: 408 KGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
G ++ +T G R+ N GLIRS
Sbjct: 422 GGNTDAKTSPQDSPTGFLFGVFKSRSFVNFGLIRS 456
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/455 (51%), Positives = 294/455 (64%), Gaps = 34/455 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 13 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDY---T 129
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 130 VVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 189
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K TVS A+ THT+R+LHQ+MFADRDY+
Sbjct: 190 SKIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G +A
Sbjct: 250 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 309
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFR 347
Y E+YIRH DG+P+ SE ERQRVI+CL+AA+ RR SEG++LELC DR GLL+DVTR FR
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 348 ENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQ 407
EN L VTRAEV T+ D+ALN FYV D G D K IE++RQ IG + L+VK
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVK-------- 421
Query: 408 KGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
G ++ + G R+ N GLIRS
Sbjct: 422 GGNTDAKPSPQDSPTGFLFGVFKSRSFVNFGLIRS 456
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/388 (55%), Positives = 274/388 (70%), Gaps = 25/388 (6%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W + L DE+EKLVIRMN PRV +DN T TL+KVDSA + G LLE VQVLTD+NL+
Sbjct: 4 WTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL--ETIHYGRSNSFNGL---- 116
+++AYISSDG +FMDVFHVTD NG K+ E V I+QSL + G+
Sbjct: 64 VRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAA 123
Query: 117 --TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +ELTG DR GLLSEVFA+LADL+C+VV A+VWTHN R+AS++Y+ D +G PI++
Sbjct: 124 EHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNP 183
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ +I+ L VL+GD D ++A VS TH +RRLHQ+M+ADRDY+ + DY
Sbjct: 184 DRLTKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYDI-----YDGDY 238
Query: 235 PV---------VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VTV + D+ Y+VVN++C DR KLLFD VCT+TDM+YVV+H T+N G
Sbjct: 239 SCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGP 298
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
AY E+YIRH+DG PISSE ERQRVI CLEAAV RR SEGV+LEL EDR GLL+DVTR
Sbjct: 299 EAYQEYYIRHVDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRI 358
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTD 373
FRENGL+V RAEV+T +A+N+FYVTD
Sbjct: 359 FRENGLSVCRAEVTTRGSQAMNVFYVTD 386
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 219 DRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
D ++E++ V+R + P VTV N + R+ +++ V ++ L +VV LTDM +V A
Sbjct: 11 DDEFEKL-VIRMNP--PRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRA 67
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG-----------RRASEGVR 327
I++ G F++ +G I E R+ Q L V + A+E
Sbjct: 68 YISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTT 127
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE-MGNPAD 380
+EL DR GLL++V + NV AEV T ++ Y+TD+ G P D
Sbjct: 128 IELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPID 181
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 291/419 (69%), Gaps = 16/419 (3%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N PRV +DN C +TL+KVDS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE-------TIHYGRS--- 110
L+I KAYISSDG +FMDVFHVTD G K+ D I YIE++L T G+
Sbjct: 61 LIITKAYISSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGV 120
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+S TA+ELTG DR GLLSE+ AVLA+L +VV A+VWTHN RIA ++YV D +
Sbjct: 121 HSVGDHTAIELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRA 180
Query: 171 IEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
++D ++ +E +L+N+L+G D+D + + + SM TH +RRLHQM+FADRDYE V
Sbjct: 181 VDDPTRLSAMEDQLKNILRGCDDDEKEGRTSFSMGFTHVDRRLHQMLFADRDYEGGIVAT 240
Query: 230 HSTD----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
D P +TV++ ++ YSVV V+CKDR KL+FD+VCTLTDM+YVVFHATI++
Sbjct: 241 EIHDPPSFKPKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAP 300
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
A E+YIRH+DG + +E E+ RVI+CLEAA+ RR SEG+ LELC +DR GLL++VTR
Sbjct: 301 HASQEYYIRHMDGCVLDTEGEKDRVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRI 360
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKELPM 403
RENGL+V+RA V T ++A+N+FYV D GNP D KIIEA+R++IG + L VK+ P+
Sbjct: 361 LRENGLSVSRAGVMTIGEQAMNVFYVRDASGNPVDMKIIEALRREIGHTMMLNVKKPPV 419
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 303/447 (67%), Gaps = 25/447 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVVIDN AT+++VDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D ISYI+++LE +Y + G+ T++ELT
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN--SGSPIEDSQQIDRI 180
GTDR GLLSEV AVLA +QC+V A++WTHN R+A+++ V D +G IED +I I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RL N+L+G N +R+A + ++TH ERRLHQMMF DRDY T+ V+V
Sbjct: 188 SRRLDNLLRGQNGVRAA---AAASLTHKERRLHQMMFEDRDYGAAGPPDPRTE---VSVT 241
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT--AGERAYLEFYIRHIDG 298
+ A+R Y+VV V+C+DR KLLFD VCT+TDM+YVV H T+++ AG AY E+YIRH+DG
Sbjct: 242 HCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGG-AYQEYYIRHVDG 300
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
P+S+E ER+RV+QCLEAAV RR ++G+ LE+ +DR GLL+DVTR FRENGL + RAE+
Sbjct: 301 HPVSTEAERRRVVQCLEAAVERRTADGLELEVRTDDRAGLLSDVTRIFRENGLTIRRAEI 360
Query: 359 STERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
S+E EA++ FY++D G+P + K IEA+R +IG + L+VK P+ SE V
Sbjct: 361 SSEDGEAVDTFYLSDPQGHPVEAKTIEAIRAQIGEATLRVKNNPLADDGGSTSE---VAA 417
Query: 419 GGAVLLSLGSLVR--RNLYNLGLIRSY 443
G L G+L + R N GLI+ Y
Sbjct: 418 GSTAFL-FGNLFKFYRPFQNFGLIKLY 443
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/421 (52%), Positives = 294/421 (69%), Gaps = 20/421 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++
Sbjct: 19 MAKVCWPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDID 78
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS------ 110
LLI KAYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++
Sbjct: 79 LLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRV 138
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D +
Sbjct: 139 GVHSVGDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATC 198
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++D ++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE
Sbjct: 199 RAVDDPTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGT 258
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++
Sbjct: 259 TIEA-DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISS 317
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G A E++IRH+DG + +E E++RVI+CLEAA+ RR SEG+ LELC +DR GLL++V
Sbjct: 318 DGPYASQEYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEV 377
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKEL 401
TR RE+GL+VTRA VST ++A+N+FYV D G P D K IEA+R++IG + L VK+
Sbjct: 378 TRVLREHGLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKE 437
Query: 402 P 402
P
Sbjct: 438 P 438
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/421 (52%), Positives = 294/421 (69%), Gaps = 20/421 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++
Sbjct: 20 MAKVCWPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDID 79
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS------ 110
LLI KAYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++
Sbjct: 80 LLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRV 139
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D +
Sbjct: 140 GVHSVGDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATC 199
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++D ++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE
Sbjct: 200 RAVDDPTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGT 259
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++
Sbjct: 260 TIEA-DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISS 318
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G A E++IRH+DG + +E E++RVI+CLEAA+ RR SEG+ LELC +DR GLL++V
Sbjct: 319 DGPYASQEYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEV 378
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKEL 401
TR RE+GL+VTRA VST ++A+N+FYV D G P D K IEA+R++IG + L VK+
Sbjct: 379 TRVLREHGLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKE 438
Query: 402 P 402
P
Sbjct: 439 P 439
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/421 (52%), Positives = 294/421 (69%), Gaps = 20/421 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++
Sbjct: 1 MAKVCWPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDID 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS------ 110
LLI KAYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++
Sbjct: 61 LLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSVGDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATC 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++D ++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE
Sbjct: 181 RAVDDPTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGT 240
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++
Sbjct: 241 TIEA-DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISS 299
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G A E++IRH+DG + +E E++RVI+CLEAA+ RR SEG+ LELC +DR GLL++V
Sbjct: 300 DGPYASQEYFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEV 359
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKEL 401
TR RE+GL+VTRA VST ++A+N+FYV D G P D K IEA+R++IG + L VK+
Sbjct: 360 TRVLREHGLSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKE 419
Query: 402 P 402
P
Sbjct: 420 P 420
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 298/448 (66%), Gaps = 27/448 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYITS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA----- 118
DG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNV 135
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D ++ + D+++++
Sbjct: 136 IELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERLE 195
Query: 179 RIEARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYERMPVLRHS-TDYP 235
RI +L +L+G N R A M VS A THTERRLHQMM D DYE++ L + P
Sbjct: 196 RIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLAPGQSQRP 255
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VTV+NW D+ YSVV ++CKDR KLLFD VCTLTD++YVVFHA I+ +AY EFY+RH
Sbjct: 256 NVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRH 315
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
++G+P+++E ER RVIQCLEAA+ RR SEGV+LELC D+ GLL++VTR FREN L VTR
Sbjct: 316 VNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTR 375
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH-QKGESEEQ 414
AEV+T A+N FYV G D K I+++RQ IG S L+VK P QK ES
Sbjct: 376 AEVTTRGRMAVNTFYVRGSTGEDVDQKAIDSIRQAIGHS-LQVKGQPEPQEAQKKES--- 431
Query: 415 TVGVGGAVLLSLGSLVR-RNLYNLGLIR 441
+L R R+LY+ G +R
Sbjct: 432 ------PTWFLFANLFRPRSLYSFGFMR 453
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/422 (51%), Positives = 281/422 (66%), Gaps = 39/422 (9%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG---------------------R 109
DG +FMDVF V D +GNK+ D V+ YI++ H+ R
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQR 123
Query: 110 SNSFNG-----------------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
S G T++EL GTDR GLLSEV AVL DL C+VV A++WTH
Sbjct: 124 IESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTH 183
Query: 153 NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRL 212
N R A++I+V D ++ S I D ++ I+ L NV++ ++ R+AK S + TH ERRL
Sbjct: 184 NTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSDTHRERRL 243
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
HQ+MF DRDYE + R S P VT+ N ++ Y+VV ++ KDR KL+FDVVCTLTDM+
Sbjct: 244 HQIMFDDRDYEGVKRARTSASRPSVTLMN-IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQ 302
Query: 273 YVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCM 332
YVVFH ++T AY EFYIRH+DG PI+SE E++RVIQCLEAA+ RRASEG+ LEL
Sbjct: 303 YVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASEGLELELSA 362
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
EDR GLL+D+TRTFREN L + RAE+ST +A + FYVTD GNP + KI+E++RQ+IG
Sbjct: 363 EDRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVTDVTGNPVESKIVESIRQQIG 422
Query: 393 LS 394
+S
Sbjct: 423 VS 424
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/452 (49%), Positives = 303/452 (67%), Gaps = 37/452 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN P +V+DN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSL-----------ETIHYGRSNSFNG 115
DG +FMDVF++TD G KL D++ ++ YI +SL ++ S + N
Sbjct: 75 DGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA+L+C+VV A++WTHN R A+++ V D ++G + D++
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTE 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI+ RL +L+G N R A M VS + THTERRLHQMM D D E++ RH+++
Sbjct: 192 RLERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQ--RHASN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P VTV+NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY E
Sbjct: 250 QSQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQE 309
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
FY+RH++G+P+++E ER RV+QCLEAA+ RR EG++LELC D+ GLL++VTR FREN
Sbjct: 310 FYVRHVNGSPMNTEAERLRVVQCLEAAIERRVWEGMKLELCTNDKVGLLSEVTRIFRENS 369
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH-QKG 409
L VTRAEVST A+N FYV G D K I+++RQ+IG N++VK P QK
Sbjct: 370 LTVTRAEVSTRGRTAVNTFYVCGSAGEAVDQKTIDSIRQEIG-HNIQVKGQPEPSEPQKK 428
Query: 410 ESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLI 440
ES +L R R+LY+LG+
Sbjct: 429 ES---------PTWFLFANLFRPRSLYSLGMF 451
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/451 (49%), Positives = 301/451 (66%), Gaps = 25/451 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY+KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVL D+NL+I KAYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------TALELTGT 124
DG +FMDVF+V GNK+ D+ VI+ I+ LE G+ T++EL+GT
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGT 122
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVLADL C+VV A VWTHN R A++++V D +G I D Q++ I+ L
Sbjct: 123 DRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELL 182
Query: 185 RNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTD----YPVVTV 239
NVL+G+ +++ AKMT+S VT T+RRLHQ+M ADRDYER + + P VTV
Sbjct: 183 CNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTV 242
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-----GERAYLEFYIR 294
+ ++ Y+++ + +DR KLLFDV+CTLTDMEYVVFH + T ++ EFYIR
Sbjct: 243 FDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQEFYIR 302
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H DG PISS+ ER RV+ CLEAA+ RR SEG++LELC EDR GLL+D+TR FREN L +
Sbjct: 303 HKDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIR 362
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAE++T+R +A +IFYVTD G D K++E++R++IG + L+VK + + +E
Sbjct: 363 RAEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCL--SETPPKEM 420
Query: 415 TVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
T G LG + R N LIRSYS
Sbjct: 421 TAG------FFLGYFFKARTFQNFKLIRSYS 445
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/452 (49%), Positives = 292/452 (64%), Gaps = 37/452 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+ IDN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS---------------YIEQSLETIHYGRSNSFNG 115
DG + MDVF++TD G KL D++ I+ YI ++ S+ N
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D +GS + D+
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDAD 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI RL +L+G N R A M VS THTERRLHQMM D D+E++ RH +
Sbjct: 192 RLERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLH--RHPPN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P VTV NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY E
Sbjct: 250 QSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQE 309
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
FY+RH++G+P+ +E +R RVIQCLEAA+ RR SEGV+LELC D+ GLL++VTR FREN
Sbjct: 310 FYVRHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENS 369
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH-QKG 409
L VTRAEVST A+N FYV D G D K I+++RQ IG N++VK P QK
Sbjct: 370 LTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIG-QNIQVKGQPEPSEPQKK 428
Query: 410 ESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLI 440
ES +L R R+LY+ G+
Sbjct: 429 ES---------PTWFLFANLFRPRSLYSFGMF 451
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/419 (50%), Positives = 286/419 (68%), Gaps = 18/419 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE RMN PRV +DNA C TL+KVDS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-------QSLETIHYGRS--- 110
+I KAYISSDG +FMDVFHVTD G K+TD I +IE QS E + S
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDA-TN 179
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++++ ++ +E +L N+L+G + + A+ + SM TH +RRLHQM+FADRDYE V
Sbjct: 180 QAVDEANRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAVA 239
Query: 229 RH----STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
R + P +T++ ++ YSVV+V+CKDR KL+FD+VCTLTDM+YVVFHAT+++ G
Sbjct: 240 REVDSPPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDG 299
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
A E++IRH+DG + ++ E++RVIQC+EAA+ RR SEGV LELC +DR GLL++VTR
Sbjct: 300 PYALQEYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTR 359
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNL-KVKELP 402
RENGL V RA VST ++ALN+FYV D GNP D K +EA+R++IG + + VK +P
Sbjct: 360 ILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVP 418
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/393 (53%), Positives = 279/393 (70%), Gaps = 6/393 (1%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN+PRVVI+N VC AT+++VD+ R G LLE VQ L DLNL+I KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-----GRSNSFNGLTALELTGTDRV 127
+FM+VFHVTD GNK+ DE +++ IE++LET Y G+ T +ELTGTDR
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGKMLLSKEHTLVELTGTDRP 130
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
GLLSEV AVL DL C+VV A++W HN R A++I+V D ++G+ IED +Q+ I+ L NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 188 LKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
LKG D R+ +++S H RRLHQMMFA RD+ER ++ P VTV + DR
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSEDDNSVRPSVTVSDCPDRD 250
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
Y+VV DR KLLFD VCTLTDM+Y+VFH T+NT+ + AY E+YIRH+DG P+SSE E
Sbjct: 251 YTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGLPVSSEAE 310
Query: 307 RQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
RQRV++C++AA+ RRA+EG+ LEL +D GL++D+TR RENGL RAE+ST+ +A
Sbjct: 311 RQRVMECIQAAIERRATEGLHLELFTDDHFGLISDITRILRENGLCPKRAEISTKNGKAK 370
Query: 367 NIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK 399
+ F VTD GNP +PK I +RQ++G + ++VK
Sbjct: 371 HNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVK 403
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/452 (49%), Positives = 291/452 (64%), Gaps = 37/452 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+ IDN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS---------------YIEQSLETIHYGRSNSFNG 115
DG + MDVF++TD G KL D++ I+ YI ++ S+ N
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D +GS + D+
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDAD 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI RL +L+G N R M VS THTERRLHQMM D D+E++ RH +
Sbjct: 192 RLERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLH--RHPPN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P VTV NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY E
Sbjct: 250 QSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQE 309
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
FY+RH++G+P+ +E +R RVIQCLEAA+ RR SEGV+LELC D+ GLL++VTR FREN
Sbjct: 310 FYVRHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENS 369
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH-QKG 409
L VTRAEVST A+N FYV D G D K I+++RQ IG N++VK P QK
Sbjct: 370 LTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIG-QNIQVKGQPEPSEPQKK 428
Query: 410 ESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLI 440
ES +L R R+LY+ G+
Sbjct: 429 ES---------PTWFLFANLFRPRSLYSFGMF 451
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 300/445 (67%), Gaps = 17/445 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS-D 71
YE V MN PRVV+DN C TATLV+V SAR+HG+LL+AV L+D + ++K YISS D
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSFNGLTA-----LELTGTD 125
GR+FMDVFHV D G K+ D ++++ +E SL A LEL G D
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAAGAGTPTLLELVGAD 129
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYP---VVTVQN 241
+VL+G + + + + + +RRLHQ++ D + R + P V VQ+
Sbjct: 190 HVLRG-GALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQD 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T + A EFYIR +D PI
Sbjct: 249 WVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPI 308
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
SS ER+RVIQCLEAA+ RRASEGVRLEL + DR+GLLA VTR FREN L+VT AE++T
Sbjct: 309 SSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTR 368
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGVG 419
D A+N+F+VTD G PADPK I+ V Q+IG +L+V E P + +G++
Sbjct: 369 GDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGG--- 425
Query: 420 GAVLLSLGSLVRRNLYNLGLIRSYS 444
GA + SLGSLV++NL +LGLIRS S
Sbjct: 426 GAGIFSLGSLVKKNLVSLGLIRSCS 450
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 292/441 (66%), Gaps = 25/441 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + +
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S T++E+ DR GLLSEV AVLADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G + D + A+ ++S+ TH +RRLHQM FADRDYE +
Sbjct: 181 RAVDDPERLSSMEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVT 240
Query: 227 VLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L S P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G A E++IRH DG + +E E++RV++CLEAA+ RR SEG LELC +DR GLL++VT
Sbjct: 301 GSHASQEYFIRHKDGCTLDTEGEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVT 360
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS---NLKVKE 400
R RE+GL+V+RA V+T ++A+N+FYV D GNP D K IEA+R +IG S + K K
Sbjct: 361 RILREHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKV 420
Query: 401 LPMIYHQKGESEEQTVGVGGA 421
+ ++G++ G GG
Sbjct: 421 PSRKWKEEGQA-----GTGGG 436
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/424 (50%), Positives = 287/424 (67%), Gaps = 20/424 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE R+N PRV +DN C TL+K DS + GILLE VQ+LTDL+
Sbjct: 1 MTKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-------QSLETIHYGRS--- 110
+I KAYISSDG +FMDVFHVTD G K+TD I +IE QS E + +
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S T +EL G DR GLLSE+ AVLA LQ +V+ A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSIGDHTVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDA-TN 179
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++DS+++ IE +L ++L+G ++D + A+ + SM +TH +RRLHQM+FADRDYE V
Sbjct: 180 QAMDDSKRLSIIEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGV 239
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P + ++ ++ YSVV+V+CKDR KL+FD+VCTLTDMEYVVFHATI++
Sbjct: 240 TTTDVDCPPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISS 299
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G+ A E++IRH+DG + +E E++R I+C+EAA+ RR SEGV LELC +DR GLL++V
Sbjct: 300 EGQYASQEYFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEV 359
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNL-KVKEL 401
TR RENGL V+RA VST ++ LN+FYV D GNP D KIIEA+ ++IG + + VK +
Sbjct: 360 TRILRENGLTVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRI 419
Query: 402 PMIY 405
P Y
Sbjct: 420 PAAY 423
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/448 (49%), Positives = 297/448 (66%), Gaps = 29/448 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA----- 118
DG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNI 135
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTGTDR GLLSEV AVL L+C+VV A++WTHN R A+++ V D ++G + D+++++
Sbjct: 136 IELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLE 195
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRHSTDYPVV 237
RI +L + +G N R A ++ A THTERRLHQMM D DYE++ + P V
Sbjct: 196 RIREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQRPNV 255
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
TV+NW D+ YSVV ++CKDR+KLLFD VCTLTD++YVVFHA I+ +AY EFY+RH++
Sbjct: 256 TVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHVN 315
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
G+P+++E ER RVIQCLEAA+ RR SEGV+LELC D+ GLL++VTR FREN L VTRAE
Sbjct: 316 GSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 375
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK---ELPMIYHQKGESEEQ 414
V+T A+N FYV G D K I+++R+ IG S L+VK E P QK ES
Sbjct: 376 VTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPPE--PQKKES--- 429
Query: 415 TVGVGGAVLLSLGSLVR-RNLYNLGLIR 441
+L R R+LY+ G +R
Sbjct: 430 ------PTWFLFANLFRPRSLYSFGFMR 451
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/441 (48%), Positives = 291/441 (65%), Gaps = 25/441 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + +
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S T++E+ DR GLLSEV AVLADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G + D + A+ ++S+ TH +RRLHQM FADRDYE +
Sbjct: 181 RAVDDPERLSSMEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVT 240
Query: 227 VLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L S P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G A E++IRH DG + +E E++R ++CLEAA+ RR SEG LELC +DR GLL++VT
Sbjct: 301 GSHASQEYFIRHKDGCTLDTEGEKERXVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVT 360
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS---NLKVKE 400
R RE+GL+V+RA V+T ++A+N+FYV D GNP D K IEA+R +IG S + K K
Sbjct: 361 RILREHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKV 420
Query: 401 LPMIYHQKGESEEQTVGVGGA 421
+ ++G++ G GG
Sbjct: 421 PSRKWKEEGQA-----GTGGG 436
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/459 (49%), Positives = 297/459 (64%), Gaps = 36/459 (7%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE++KLVI MN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 12 VDEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYIS 71
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------- 116
SDG +FMDVFHV D GNKL D VI IEQSL S SF G
Sbjct: 72 SDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGA----GSLSFRGTDRCVGVEAEAEAA 127
Query: 117 -TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +EL G DR GLLSEVFAVL +L+C++ ++VWTH+GR+A+L+YV D +G IE+ +
Sbjct: 128 QTVIELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPE 187
Query: 176 QIDRIEARLRNVLKG---DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++D ++ LR+VL+G D A ++ A H +RRLHQMM ADR R
Sbjct: 188 RLDTVKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVA 247
Query: 233 ---DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+Y+VFH T+ G AY
Sbjct: 248 DDRSLPVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQ 307
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFREN 349
E+YIRH+D +S+ +R+++ +CLEAA+ RR +EG+ LELC EDR GLL+DVTR FRE+
Sbjct: 308 EYYIRHLDDGAAASDEDREQLRRCLEAAIQRRNTEGLGLELCCEDRVGLLSDVTRIFREH 367
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKG 409
GL+VT AEV+T + A N+FYV G P + +EAVR +IG L VKE
Sbjct: 368 GLSVTHAEVATRGERAANVFYVVTASGMPVQAQAVEAVRAEIGDEILLVKE-------DA 420
Query: 410 ESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
+ + +G G SLG+++R + LYNLGLIRS S
Sbjct: 421 AAPKSPLGRDGGG-RSLGNMIRSRSEKFLYNLGLIRSCS 458
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 284/420 (67%), Gaps = 20/420 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE RMN PRV +DNA C TL+K+DS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHY 107
+I KAYISSDG +FMDVFHVTD G K+TD I IE++L + H
Sbjct: 61 FVITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHV 120
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
G +S TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D +
Sbjct: 121 G-VHSVGDYTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDA-T 178
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
+D +++ +E +L N+L+G + + A+ + SM TH +RRLHQM+FADRDYE V
Sbjct: 179 NQVADDPKRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAV 238
Query: 228 LRHSTDYPV----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R P +T++ ++ YSVV+V+CKDR KL+FD+VCTLTDM+YVVFHAT+++
Sbjct: 239 AREVDSPPSLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSD 298
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G A E++IRH+DG + ++ E++RVIQC+EAA+ RR SEGV LELC +DR GLL++VT
Sbjct: 299 GPYALQEYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVT 358
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNL-KVKELP 402
R RENGL+V RA VST ++ALN+FYV D GNP D K +EA+ ++IG + + VK +P
Sbjct: 359 RILRENGLSVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVP 418
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 289/421 (68%), Gaps = 20/421 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE R+N PRV +DN C TL+K DS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-------QSLETIHYGRS--- 110
+I KAYISSDG +FMDVFHVTD G K+TD I +IE QS E ++ +
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLA LQ +V+ A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSIGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDA-TN 179
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++DS+++ +E +L ++L+G ++D + A+ + +M TH +RRLHQM+FADRDYE + +
Sbjct: 180 QAMDDSKRLSIMEEQLNHILRGCEDDEKVARTSFTMGFTHMDRRLHQMLFADRDYESVGL 239
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P + ++ ++ YSVV+V+CKDR KL+FD+VCTLTDMEYVVFHATI++
Sbjct: 240 TTTDVDCPPSFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISS 299
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G+ A E++IRH+DG + +E E++RVI+C+EAA+ RR SEGV LELC +DR GLL++V
Sbjct: 300 EGQYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEV 359
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG-LSNLKVKEL 401
TR RENGL V+RA VST ++ LN+FYV D GNP D KIIEA+ ++IG + + VK +
Sbjct: 360 TRILRENGLRVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQIMMVNVKRV 419
Query: 402 P 402
P
Sbjct: 420 P 420
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/393 (52%), Positives = 279/393 (70%), Gaps = 6/393 (1%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN+PRVVI+N C AT++++D+ R G LLE VQVLTDLNL+I KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-----GRSNSFNGLTALELTGTDRV 127
+FM+VFHVTD +GNK+ DE +++ I+++LET Y G+ T +ELTGTDR
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGKMLLSKEHTLIELTGTDRP 130
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
GLLSEV AVL DL C+VV A+VW HN R A++I++ D ++G+ IED +Q+ I+ L NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 188 LKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
LKG D R+ +++S H RRLHQMMFA RD+ER + P VTV + DR+
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVSVDDIRVRPYVTVSDCPDRN 250
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
Y+VV + DR KLLFD VCTLTDM+Y+VFH T+ T + AY E+YIRH DG P+SSE E
Sbjct: 251 YTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGLPMSSEAE 310
Query: 307 RQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
RQRV++C++AA+ RR SEG++LEL +D GLL+D+TR RENGL RA++ST+ +A
Sbjct: 311 RQRVMECIQAAIERRVSEGLQLELFTDDHFGLLSDITRILRENGLCPKRAKISTKNGKAR 370
Query: 367 NIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK 399
+ F VTD GNP +PK I +RQ++G + ++VK
Sbjct: 371 HNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVK 403
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/438 (48%), Positives = 289/438 (65%), Gaps = 20/438 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + +
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S T++E+ DR GLLSEV A+LADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G D + A+ ++S+ TH +RRLHQM FAD+DYE +
Sbjct: 181 RAVDDPERLSAMEEQLNNVLRGCEQEDEKFARTSLSIGSTHVDRRLHQMFFADKDYEAVT 240
Query: 227 VLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G A E++IRH DG + + E++RV++CLEAA+ RR SEG LELC +DR GLL++VT
Sbjct: 301 GSHASQEYFIRHKDGCTLDT-GEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVT 359
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPM 403
R RE+GL+V+RA V+T ++A+N+FYV D GNP D K IEA+R +IG S + +
Sbjct: 360 RILREHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHS-MMIDFKNK 418
Query: 404 IYHQKGESEEQTVGVGGA 421
+ +KG+ E Q G GG
Sbjct: 419 VPSRKGKEEGQ-AGTGGG 435
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/465 (49%), Positives = 294/465 (63%), Gaps = 38/465 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE+EKLVIRMN PRV +DN TATLVKVDSA ++G LLE VQVLT+L L IK+AYIS
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYIS 70
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGRSNSFNGLTA 118
SDG +FMDVFHV D +GNKL D VI IE SL E + + TA
Sbjct: 71 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTA 130
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL G DR GLLSEVFAVL DL+C++V ++VWTH+ R+A+L++V D ++ I+D ++D
Sbjct: 131 IELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLD 190
Query: 179 RIEARLRNVLKGDN-DIRSAKMTVSM---------AVTHTERRLHQMMFADR-----DYE 223
++ LR++L+G R K T A H RRLHQMM DR
Sbjct: 191 TVKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPS 250
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
PVV V + A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 251 SSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAE 310
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G AY E+YIRH+D +P++S ER R+ +CLEAA+ RR +EG+RLELC EDR GLL+DVT
Sbjct: 311 GSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELCCEDRVGLLSDVT 370
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPM 403
R FRE+GL+VT AEV+T A N+FYV G P + +EAVR +IG L V+E
Sbjct: 371 RIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVRE--- 427
Query: 404 IYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
G E ++ G SLG+++R + LYNLGLIRS S
Sbjct: 428 ---DAGGGEPRS--PPGRDRRSLGNMIRSRSEKFLYNLGLIRSCS 467
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/395 (51%), Positives = 278/395 (70%), Gaps = 6/395 (1%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
D Y KL+ R+N+PRVV+DN C AT+++VD+ +R G LLE VQVLTDLNL++ KAY+SS
Sbjct: 3 DAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMSS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSNSFNGLTALELTGTD 125
DG +FM+VF+VTD +GNK+ DE +++ IE++LET G+ T +ELTGTD
Sbjct: 63 DGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACMVKSTGKMLPSKEHTLIELTGTD 122
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEV AVL DL+C+VV A++W HNGR A++I++ D ++G+ IED +++ I+ L
Sbjct: 123 RPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIKELLY 182
Query: 186 NVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
NVLKG D R+ +++S H RRLHQMMFA RD+ER ++ P VTV + D
Sbjct: 183 NVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERPGSENDNSVRPYVTVFDCPD 242
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
R Y+VV DR KL+FD VCTLTDM+Y+VFH T+ T ++AY E+YIRH+DG P SSE
Sbjct: 243 RDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHVDGFPTSSE 302
Query: 305 PERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDE 364
ERQRVI+C++AA+ RRASEG+ LEL +D GLL+ +TR RENGL AE+ST +
Sbjct: 303 AERQRVIECIQAAIERRASEGLPLELFTDDHFGLLSYITRILRENGLWPKSAEISTRNGK 362
Query: 365 ALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK 399
A + + VTD GNP DPK I + Q++G + L+VK
Sbjct: 363 AKHSYIVTDVSGNPVDPKTILLIHQQMGQTVLQVK 397
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/455 (48%), Positives = 294/455 (64%), Gaps = 21/455 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVV+DN C AT+++VDS HG LL VQV+ DL L+I+KAY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D+ ISYI+ +LE +Y + G+ T +ELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD-CNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVLA ++C+V A++WTHN R+A++++V D SG IED +I I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-------ERMPVLRHSTDY 234
RL N+L+G + +R+A +TH ERRLHQMMF DRDY P R T
Sbjct: 196 TRLGNLLRGQSGVRAAAAAAPGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPTPA 255
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYI 293
V+V A+R Y+ V V+C+DR KLLFD VCT+TDM YV+ H +++ AY E+YI
Sbjct: 256 TEVSVTPCAERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYI 315
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNV 353
RH+DG P+ SE ERQRV+QCLEAA+ RR ++G+ LE+ DR GLL+DVTR FRENGL +
Sbjct: 316 RHVDGDPVRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTI 375
Query: 354 TRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPM--IYHQKGES 411
RAE+S+ER EA++ FY++D G+P + K I+A+R +IG + L+VK P G
Sbjct: 376 RRAEISSERGEAVDTFYLSDPQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGG 435
Query: 412 EEQTVGVGGAVLLSLGSLVR--RNLYNLGLIRSYS 444
T V G+ G+L + R N LI+ YS
Sbjct: 436 GGATDDVAGSTAFLFGNLFKFYRPFQNFSLIKLYS 470
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/452 (47%), Positives = 292/452 (64%), Gaps = 30/452 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN PRVVIDN AT++KVDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL--------TALELT 122
DG +FMD F+VTD +GNK+ D S ISYI+++LE + + N + T++ELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVLA + +V A++WTHN R+A++++V D +G IEDS +I I A
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV------ 236
RL N+L+ +D+R+ S+A+ H ERRLHQMMF DR E H+ P
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLAL-HKERRLHQMMFDDRGVEG-----HAAAAPPDGSLRT 245
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAYLEFYIR 294
V+V + A+R Y+ V V+C+DR KLLFD VCT+TDMEYVV H T++ G AY E+YIR
Sbjct: 246 EVSVTH-AERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIR 304
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H+DG I E E+QR+++CL AA+ RR ++G+ LE+ DR GLL+D+TR FRENGL +
Sbjct: 305 HVDGHAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIR 364
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAE+S+ EA++ FY++D G P + K IEA+R +IG + L+V+ P G ++
Sbjct: 365 RAEISSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPF-----GTGDDA 419
Query: 415 TVGVGGAVLLSLGSLVR--RNLYNLGLIRSYS 444
+ G G+L + R + LI+ YS
Sbjct: 420 DMAGAGTTAFIFGNLFKFYRPFQSFSLIKLYS 451
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/474 (48%), Positives = 299/474 (63%), Gaps = 53/474 (11%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 14 VDEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYIS 73
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 74 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGA----GSLSFRGPPERLVAVEAEAEE 129
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ I+D
Sbjct: 130 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDP 189
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRDYERMPVLR--- 229
++D ++ LR+VL+G + + A + H RRLHQMM ADR R
Sbjct: 190 ARLDTVKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDG 249
Query: 230 -----------HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
+ PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH
Sbjct: 250 EEERERGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHG 309
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGL 338
T+ G AY E+YIRH+D SS +R R+ + LEAA+ RR +EG+RLELC EDR GL
Sbjct: 310 TVIAEGSEAYQEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTEGLRLELCCEDRVGL 366
Query: 339 LADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPK-IIEAVRQKIGLSNLK 397
L+DVTR FRE+GL+VT AEV T A N+FYV D G P + ++AVR +IG
Sbjct: 367 LSDVTRIFREHGLSVTHAEVETRGARAANVFYVVDASGEPVQAQAAVDAVRAEIG----- 421
Query: 398 VKELPMIYHQKGES---EEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
+ L ++ Q+ ++ + G GG SLG+++R + LYNLGLIRS S
Sbjct: 422 EQVLLLVREQQQDAAGGPKSPAGAGGR--RSLGNMIRSRSEKFLYNLGLIRSCS 473
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 292/451 (64%), Gaps = 29/451 (6%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
AC R+ R+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAY
Sbjct: 4 ACSKPNPGQFWRLIGRRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAY 63
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA-- 118
I+SDG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 64 ITSDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAAD 123
Query: 119 ---LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVL L+C+VV A++WTHN R A+++ V D ++G + D++
Sbjct: 124 HNIIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAE 183
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRHSTDY 234
+++RI +L + +G N R A ++ A THTERRLHQMM D DYE++ +
Sbjct: 184 RLERIREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQR 243
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV+NW D+ YSVV ++CKDR+KLLFD VCTLTD++YVVFHA I+ +AY EFY+R
Sbjct: 244 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 303
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H++G+P+++E ER RVIQCLEAA+ RR SEGV+LELC D+ GLL++VTR FREN L VT
Sbjct: 304 HVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVT 363
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK---ELPMIYHQKGES 411
RAEV+T A+N FYV G D K I+++R+ IG S L+VK E P QK ES
Sbjct: 364 RAEVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVKGQAEPP--EPQKKES 420
Query: 412 EEQTVGVGGAVLLSLGSLVR-RNLYNLGLIR 441
+L R R+LY+ G +R
Sbjct: 421 ---------PTWFLFANLFRPRSLYSFGFMR 442
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/466 (50%), Positives = 292/466 (62%), Gaps = 38/466 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATL+KVDSA ++G LLE VQVLTDL L IK+AYIS
Sbjct: 13 VDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYIS 72
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 73 SDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLG----AGSLSFRGPPERAVAVEAEAEE 128
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ IED
Sbjct: 129 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDP 188
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRD---------YE 223
++D LR+VL+G + + A A H RRLHQMM ADR
Sbjct: 189 ARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEG 248
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 249 DGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAE 308
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G AY E+YIRH+D SS ER+R+ + LEAA+ RR +EG+RLELC EDR GLL+DVT
Sbjct: 309 GSEAYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVT 368
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKIIEAVRQKIGLSNLKVKELP 402
R FRE+GL+VT AEV T A N+FYV D G P + + AVR +IG L V+E
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQ 428
Query: 403 MIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
TV G SLG+++R + LYNLGLIRS S
Sbjct: 429 DAAAAAANGTRSTVAGG---RRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/473 (48%), Positives = 294/473 (62%), Gaps = 46/473 (9%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK--------VDSARRHGILLEAVQVLTDLNL 61
+DE+EKLVIRMN PRV +DN TATLVK VDSA ++G LLE VQVLT+L L
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKL 70
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGRS 110
IK+AYISSDG +FMDVFHV D +GNKL D VI IE SL E +
Sbjct: 71 TIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEA 130
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+ TA+EL G DR GLLSEVFAVL DL+C++V ++VWTH+ R+A+L++V D ++
Sbjct: 131 EAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGA 190
Query: 171 IEDSQQIDRIEARLRNVLKGDN-DIRSAKMTVSMAV---------THTERRLHQMMFADR 220
I+D ++D ++ LR++L+G R K T A+ H RRLHQMM DR
Sbjct: 191 IDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDR 250
Query: 221 -----DYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
PVV V + A+R Y++VNV+C+DR KLLFD VCTLTDM+YVV
Sbjct: 251 AAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVV 310
Query: 276 FHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDR 335
FH T+ G AY E+YIRH+D +P++S ER R+ +CLEAA+ RR +EG+RLEL EDR
Sbjct: 311 FHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCEDR 370
Query: 336 QGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSN 395
GLL+DVTR FRE+GL+VT AEV+T A N+FYV G P + +EAVR +IG
Sbjct: 371 VGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQV 430
Query: 396 LKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
L V+E G E ++ G SLG+++R + LYNLGLIRS S
Sbjct: 431 LFVRE------DAGGGEPRS--PPGRDRRSLGNMIRSRSEKFLYNLGLIRSCS 475
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/452 (47%), Positives = 291/452 (64%), Gaps = 30/452 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN PRVVIDN AT++KVDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL--------TALELT 122
DG +FMD F+VTD +GNK+ D S ISYI+++LE + + N + T++ELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVLA + +V A++WTHN R+A++++V D +G IEDS +I I A
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV------ 236
RL N+L+ +D+R+ S+A+ H ERRLHQMMF DR E H+ P
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLAL-HKERRLHQMMFDDRGVEG-----HAATAPPDGSLRT 245
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAYLEFYIR 294
V+V + A+R Y+ V V+C+DR KLLFD VCT+TDM+YVV H T++ G AY E+YIR
Sbjct: 246 EVSVTH-AERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIR 304
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H+DG I E E+QR+++CL AA+ RR ++G+ LE+ DR GLL+D+TR FRENGL +
Sbjct: 305 HVDGHAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIR 364
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RAE+S+ EA++ FY++D G P + K IEA+R +IG + L+V+ + G +
Sbjct: 365 RAEISSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRN-----NSFGTGDHA 419
Query: 415 TVGVGGAVLLSLGSLVR--RNLYNLGLIRSYS 444
V G G+L + R + LI+ YS
Sbjct: 420 DVAGAGTTAFIFGNLFKFYRPFQSFSLIKLYS 451
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/466 (50%), Positives = 292/466 (62%), Gaps = 38/466 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATL+KVDSA ++G LLE VQVLTDL L IK+AYIS
Sbjct: 13 VDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYIS 72
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 73 SDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLG----AGSLSFRGPPERAVAVEAEAEE 128
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ IED
Sbjct: 129 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDP 188
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRD---------YE 223
++D LR+VL+G + + A A + RRLHQMM ADR
Sbjct: 189 ARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEG 248
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 249 DGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAE 308
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
G AY E+YIRH+D SS ER+R+ + LEAA+ RR +EG+RLELC EDR GLL+DVT
Sbjct: 309 GSEAYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVT 368
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKIIEAVRQKIGLSNLKVKELP 402
R FRE+GL+VT AEV T A N+FYV D G P + + AVR +IG L V+E
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQ 428
Query: 403 MIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
TV G SLG+++R + LYNLGLIRS S
Sbjct: 429 DAAAAAANGTRSTVAGG---RRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/462 (47%), Positives = 292/462 (63%), Gaps = 27/462 (5%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
W EYE L +N PRVVI+NA AT++K+DS RHGILLE VQVLTDL+L I K
Sbjct: 10 WAYFDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISK 69
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ--SLETIHYGRSNSFNGL---TALE 120
AY+SSD +FMDVFHVTD++GNK+TDE V+ +I++ S E R + G TA+E
Sbjct: 70 AYVSSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEGGEITRVSLGTGPHQHTAIE 129
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD-CNSGSPIEDSQQIDR 179
L+G +R GLLSEVF+ L+ + C+V A VWTHN R+A +I+V + C+SG PIED ++
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IEARLRNVLKGDNDIRS--AKMTVSM--AVTHTERRLHQMMFADRDY------------- 222
I+ RL V++ ++ R A T +TH ERRLHQMM AD D+
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
E + P VTV+N +R YSVVN+ C+DR+KLLFD VCTLTDM+Y++FHATI +
Sbjct: 250 ETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILS 309
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G AY EFYIRH DG + ++ ERQR+I+ L AA+ RR EG+RLELC DR GLL+DV
Sbjct: 310 EGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLRLELCTYDRVGLLSDV 369
Query: 343 TRTFRENGLNVTRAEVSTERDEAL-NIFYVTDEM-GNPADPKIIEAVRQKIGLSNLKVKE 400
T+ F +GL VTRA VST R + N FYVTD G+ D + +EA+R+++G + L V+
Sbjct: 370 TKVFHRHGLCVTRAHVSTTRAGTVANTFYVTDAASGDAVDMRTVEAIREELGQAMLNVRS 429
Query: 401 LPMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
P+ G + + A L S R LY+LGLI S
Sbjct: 430 APVCPQLLGLDDSPSPRFSLAAFFKLHS--ERILYSLGLITS 469
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 282/405 (69%), Gaps = 15/405 (3%)
Query: 48 ILLEAVQVLTDLNLLIKKAYISSD-GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETI 105
+LLEAV L++ + ++K YISSD GR+FMDVFHVTD G K+ D +++++ +E SL
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADADALLARLESSLSAE 60
Query: 106 HYGRSNSFNG----LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
R+ + LT LEL G DR GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++
Sbjct: 61 ALPRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVF 120
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
V+D +G+PI+D+ ++ RIE+RLR+VL+G + A + +RRLHQ++ D +
Sbjct: 121 VRDEETGAPIDDAARVRRIESRLRHVLRGGARCARTVLADPSAAGNLDRRLHQLLNEDGE 180
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
+ R + V VQ+W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +
Sbjct: 181 ADS----RGAAPMTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFD 236
Query: 282 TAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
T G+ A EFYIR DG PISSE ERQ VI+CL+AA+ RRASEGVRLEL + DR+GLLA
Sbjct: 237 TDGDHAQQEFYIRRSDGRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAY 296
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE- 400
VTR FRENGL+VT AE++T D A+N+F+VTD G PADPK I+ V Q+IG +L+V E
Sbjct: 297 VTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEE 356
Query: 401 -LPMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
P + +G++ + G L SLGSLV++NL++LGLIRS S
Sbjct: 357 RWPRLCSAEGDAAGRGG---GGGLFSLGSLVKKNLFSLGLIRSCS 398
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ +G ++ E+
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ + L+ R++ LEL +DR GLL+ V V + SV A++ T +
Sbjct: 263 QHVIRCLQAAIERRASEG---VRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDM 319
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ +V D +G P D + ID + R+
Sbjct: 320 AMNVFHVTDV-AGRP-ADPKTIDEVIQRI 346
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 276/448 (61%), Gaps = 50/448 (11%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDL+L I KAYISS
Sbjct: 14 DEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VT +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 74 DGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLRSVGVIPSTDSTVIELTG 133
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D +GS + D +++ I++
Sbjct: 134 CDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLIKSL 193
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-------YPV 236
LRNVLKG N + AK VS HT+RRLHQMMF DRDYE ++ + P
Sbjct: 194 LRNVLKGSNTPKEAKTVVSQGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDERQRPD 253
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+ E+
Sbjct: 254 VCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEY----- 308
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
G++LELC DR GLL++VTR FREN L VTRA
Sbjct: 309 ----------------------------GLKLELCTTDRVGLLSNVTRIFRENSLTVTRA 340
Query: 357 EVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTV 416
EV T+ +A+N FYV+D G D K I+++RQ IG + LKVK P Q+ + Q
Sbjct: 341 EVKTKGGKAVNTFYVSDASGYSIDAKTIDSIRQTIGKTLLKVKNKPKDQQQREKPPSQE- 399
Query: 417 GVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
L G ++ N GL+RSYS
Sbjct: 400 --SPTRFLFGGLFKSKSFVNFGLVRSYS 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 219 DRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
D +YE+ L + P V + N + + +V+ V + +L +VV LTD++ + A
Sbjct: 13 DDEYEK---LIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKA 69
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRA--------------SE 324
I++ G F + H DG ++ E V+ ++ ++G A ++
Sbjct: 70 YISSDGGWFMDVFNVTHQDGNKVTDEV----VLDYIQKSLGPEACFSTSLRSVGVIPSTD 125
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA--DPK 382
+EL DR GLL+++T +V AEV T A + VTD++ A DP+
Sbjct: 126 STVIELTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPE 185
Query: 383 IIEAVR 388
+ ++
Sbjct: 186 RLSLIK 191
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/436 (46%), Positives = 284/436 (65%), Gaps = 21/436 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ WP +YE N PRV I+N AT+V+V SA RHGILL VQVLTDL+
Sbjct: 1 MENQRWPYFDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ---------SLETIHYGRSN 111
L+I K+ + SDG +F+DVFHV D +GNK+ D+SV+ YI++ LE
Sbjct: 61 LVITKSDMFSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLR 120
Query: 112 SFNGLTA-----LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
+GLT +ELTG DR GLLSE+ AVL ++C+V A+VWTHN R+A +IY + N
Sbjct: 121 RSSGLTTADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTN 180
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYER 224
+G PIE ++ I+ +L VLKGD+D + A+ + A +TH ERRLHQ+M+ DR +
Sbjct: 181 TGGPIESQSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHGE 240
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
R+S P + ++ ++R YS+V++QCKDR KLLFD+VCTLTDM+YV+ HA IN+ G
Sbjct: 241 QDCDRNSQGRPKIQIKK-SERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPG 299
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
EF+IRH +G + + E Q + CLEAA+ RR +EG+RLELCM DR GLL+DVT+
Sbjct: 300 PETTQEFFIRHENGCVLDTAAE-QHLKVCLEAAINRRTTEGLRLELCMNDRVGLLSDVTK 358
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMI 404
FRENGL+V RA+V+T D+A+N+FYV D G D K++EA+R+ IG + L+VK +P
Sbjct: 359 IFRENGLSVARADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVKGVP-- 416
Query: 405 YHQKGESEEQTVGVGG 420
Q+ E + +GG
Sbjct: 417 -RQEPELSSSKLSLGG 431
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/483 (46%), Positives = 295/483 (61%), Gaps = 48/483 (9%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
W EYE L +N PRVVI+NA AT++K+DS RHGILLE VQVLTDL+L I K
Sbjct: 10 WAYFDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISK 69
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRSN-----SF 113
AY+SSD +FMDVFHVTD++GNK+TDE V+ +I++SLE I SN S
Sbjct: 70 AYVSSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSA 129
Query: 114 NG--------------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL 159
G TA+EL+G +R GLLSEVF+ L+ + C+V A VWTHN R+A +
Sbjct: 130 EGGEITRVSLGTGPHQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGM 189
Query: 160 IYVKD-CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRS--AKMTVSM--AVTHTERRLHQ 214
I+V + C+SG PIED ++ I+ RL V++ ++ R A T +TH ERRLHQ
Sbjct: 190 IFVDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQ 249
Query: 215 MMFADRDY-------------ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
MM AD D+ E + P VT++N +R YSVVN+ C+DR+KLL
Sbjct: 250 MMSADEDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLL 309
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRR 321
FD VCTLTDM+Y++FHATI + G AY EFYIRH DG + ++ ERQR+I+ L AA+ RR
Sbjct: 310 FDTVCTLTDMDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRR 369
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL-NIFYVTDEM-GNPA 379
EG+RLELC DR GLL+DVT+ F +GL VTRA +ST R + N FYVTD G+
Sbjct: 370 FPEGLRLELCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAV 429
Query: 380 DPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGL 439
D + +EA+R+++G + L V+ P+ G + + A L S R LY+LGL
Sbjct: 430 DMRTVEAIREELGQAMLNVRSAPVCPQLLGLDDSPSPRFSLAAFFKLHS--ERILYSLGL 487
Query: 440 IRS 442
I S
Sbjct: 488 ITS 490
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+++E C + ++ V P V I N V ++V + R +L + V LTD++
Sbjct: 262 RELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFDTVCTLTDMDY 321
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL-TDESVISYIEQSLETIHYGRSNSFNGLTALE 120
+I A I S+G F F++ +G L TD+ I++ + I F LE
Sbjct: 322 MIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQ----RRFPEGLRLE 377
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
L DRVGLLS+V V V A + T G +A+ YV D SG + D + ++
Sbjct: 378 LCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAV-DMRTVEA 436
Query: 180 IEARLRNVLKGDNDIRSAKM 199
I L + ++RSA +
Sbjct: 437 IREELGQAML---NVRSAPV 453
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/496 (45%), Positives = 294/496 (59%), Gaps = 69/496 (13%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK------------------------------ 39
+DE+EKLVIRMN PRV +DN TATLVK
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTG 70
Query: 40 -VDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYI 98
VDSA ++G LLE VQVLT+L L IK+AYISSDG +FMDVFHV D +GNKL D VI I
Sbjct: 71 EVDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRI 130
Query: 99 EQSL-----------ETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
E SL E + + TA+EL G DR GLLSEVFAVL DL+C++V +
Sbjct: 131 ELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSS 190
Query: 148 KVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN-DIRSAKMTVSMAV- 205
+VWTH+ R+A+L++V D ++ I+D ++D ++ LR++L+G R K T A+
Sbjct: 191 EVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIP 250
Query: 206 --------THTERRLHQMMFADR-----DYERMPVLRHSTDYPVVTVQNWADRSYSVVNV 252
H RRLHQMM DR PVV V + A+R Y++VNV
Sbjct: 251 APRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNV 310
Query: 253 QCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQ 312
+C+DR KLLFD VCTLTDM+YVVFH T+ G AY E+YIRH+D +P++S ER R+ +
Sbjct: 311 RCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGR 370
Query: 313 CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVT 372
CLEAA+ RR +EG+RLEL EDR GLL+DVTR FRE+GL+VT AEV+T A N+FYV
Sbjct: 371 CLEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVV 430
Query: 373 DEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR- 431
G P + +EAVR +IG L V+E G E ++ G SLG+++R
Sbjct: 431 AASGEPVEAHAVEAVRAEIGEQVLFVRE------DAGGGEPRS--PPGRDRRSLGNMIRS 482
Query: 432 ---RNLYNLGLIRSYS 444
+ LYNLGLIRS S
Sbjct: 483 RSEKFLYNLGLIRSCS 498
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/451 (46%), Positives = 284/451 (62%), Gaps = 29/451 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M ++ WP +YE N P+V ++ AT+VKV SA RHGILL VQVLTDL+
Sbjct: 1 MGNLRWPYFDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---- 116
L I K+ I D +FMDVFHV D NGNK D+ +I + T+ + + + L
Sbjct: 61 LTITKSDIFHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRST 120
Query: 117 -------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
T +ELTG DR GLLSE+ AVL L+C+V A+VWTHN R+AS+IY D N+G
Sbjct: 121 GLTCSEHTVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGR 180
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPV 227
PI ++D I +L V+KGD+D A+ + A +TH ERRLHQ+M+ DR E V
Sbjct: 181 PITAQSKLDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNEVPHV 240
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ PV+ ++ +R YSVV++QCKDR+KLLFD+VCTLTDM+YV++HA IN+ G
Sbjct: 241 SGNPQQRPVIQIKR-NERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPET 299
Query: 288 YLEFYIRHIDGTPI-SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTF 346
EF+IRH++G + +++ E +V CLEAA+ RR SEG+RLELCM DR GLL+DVTR F
Sbjct: 300 SQEFFIRHVNGCTLDTADAEHLKV--CLEAAINRRTSEGLRLELCMSDRIGLLSDVTRLF 357
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH 406
RENGL+V RA+++T D+A+N+FYV D G+P + ++E +R+ +G S L+VK LP
Sbjct: 358 RENGLSVARADITTRDDKAVNVFYVVDASGSPVNMNVVETMRKSLGHSILEVKGLPRPEP 417
Query: 407 QKGESEEQTVGVGGAVLLSLGSLVRRNLYNL 437
+ S+ LSLG L RN Y L
Sbjct: 418 ELPSSK-----------LSLGGLF-RNFYGL 436
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/455 (46%), Positives = 293/455 (64%), Gaps = 32/455 (7%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD ++HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------LTALELTGTD 125
+FMDVF+VTD +G+KL + VI +I++ LE+ Y + G T++ELTG D
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGFVPPEDQFTSIELTGAD 135
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEV AVLA L C++V+A+VWTH+ R A++I + D +G I D ++ R + L
Sbjct: 136 RPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELLS 195
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADR------------DYERMPVLRHSTD 233
N+++ D VS+ TERRLH+MM DR + RH
Sbjct: 196 NLMQSDGRCNRGATGVSVGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGCGKARHKA- 254
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG--ERAYLEF 291
V V + +R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G + AY E+
Sbjct: 255 -AKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAYQEY 313
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCM--EDRQGLLADVTRTFREN 349
YIRH+DG P+ ++ ER R+++CLEAAV RRAS G+ LEL + EDR GLL+++TR FREN
Sbjct: 314 YIRHVDGHPVRADAERTRLVRCLEAAVERRASNGLELELEVRTEDRVGLLSEITRVFREN 373
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKG 409
L++ RA ++T+ +A + FYV+D GNP D + I+AV +++G + L+VK K
Sbjct: 374 SLSIIRAAITTKDGKAEDTFYVSDTYGNPVDGRTIDAVGEQLGHAVLRVKRRGHDASVKH 433
Query: 410 ESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
E+E GGAV + LGSL++ + L LIRSYS
Sbjct: 434 EAE------GGAVSV-LGSLLKGSFQGLRLIRSYS 461
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 290/450 (64%), Gaps = 30/450 (6%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDR 126
+FM VF+VTD +G+KL + VI +I++ LE+ Y G + + T++ELTG DR
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADR 135
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVLA L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+
Sbjct: 136 PGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRD 195
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--------YPVVT 238
V++GD +S ERRLH +M D P V
Sbjct: 196 VMRGDGTCNRGGTGIS-----AERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVV 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG----ERAYLEFYIR 294
V + A+R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G + AY E+YIR
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIR 310
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H+DG P+ S+ ER R+++CLEAAV RRAS G+ LE+ EDR GLL+++TR FREN L++
Sbjct: 311 HVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSII 370
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RA ++T +A + FYV+D GNP D + ++AV +++G + L+VK K E+E
Sbjct: 371 RAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAE-- 428
Query: 415 TVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
GGAV + LGSL++ + L LIRSYS
Sbjct: 429 ----GGAVSV-LGSLLKSSFQGLRLIRSYS 453
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/452 (46%), Positives = 285/452 (63%), Gaps = 32/452 (7%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + +WP +YE N+PRV ++ AT+VKV+SA RHGILL VQVLTDL+
Sbjct: 1 MDNPKWPYFDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN------ 114
L I K+ I D +FMDVFHV D NGNK D+ +I SL + R F+
Sbjct: 61 LTITKSDIFHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLG--YRTRREQFSADSLRR 118
Query: 115 --GLTA-----LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
GLT +ELTG DR GLLSE+ AVL L+C+V A+VWTHN R AS++Y D ++
Sbjct: 119 STGLTVADHTVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSST 178
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERM 225
G PI + ++D I+ +L V+KGD+D A+ + A +TH ERRLHQ+M+ DR E
Sbjct: 179 GRPITNQSKLDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANEVP 238
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ P + ++ +R YSVV++ CKDR KLLFD+VCTLTDM+YV++HA IN G
Sbjct: 239 DRSGNMQGRPAIHIKR-NERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGS 297
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRT 345
EF+IRH++G + + E Q + CLEAA+ RR SEG+RLELCM DR GLL+DVTR
Sbjct: 298 ETSQEFFIRHVNGCTLDTAAE-QHLKACLEAAISRRTSEGLRLELCMNDRVGLLSDVTRI 356
Query: 346 FRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIY 405
FRENGL+V RA+++T D+A+N+FYV D G P + K++EA+R+ IG S+L+VK LP
Sbjct: 357 FRENGLSVARADITTRHDKAINVFYVVDASGRPVNMKVVEAMRETIG-SSLEVKGLP--- 412
Query: 406 HQKGESEEQTVGVGGAVLLSLGSLVRRNLYNL 437
+ E E + LSLG L RN+Y L
Sbjct: 413 --RSEPELPSTK------LSLGGLF-RNIYGL 435
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 290/450 (64%), Gaps = 30/450 (6%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDR 126
+FM VF+VTD +G+KL + VI +I++ LE+ Y G + + T++ELTG DR
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADR 135
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVLA L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+
Sbjct: 136 PGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRD 195
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMF--------ADRDYERMPVLRHSTDYPVVT 238
V++GD +S ERRLH +M + P V
Sbjct: 196 VMRGDGTCNHGGTGIS-----AERRLHTLMLDSVGGGGAEEAGGGGDESGGCGVARPKVV 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG----ERAYLEFYIR 294
V + A+R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G + AY E+YIR
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIR 310
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
H+DG P+ S+ ER R+++CLEAAV RRAS G+ LE+ EDR GLL+++TR FREN L++
Sbjct: 311 HVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSII 370
Query: 355 RAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
RA ++T +A + FYV+D GNP D + ++AV +++G + L+VK K E+E
Sbjct: 371 RAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAE-- 428
Query: 415 TVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
GGAV + LGSL++ + L LIRSYS
Sbjct: 429 ----GGAVSV-LGSLLKSSFQGLRLIRSYS 453
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 265/385 (68%), Gaps = 29/385 (7%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NGLTALE 120
M VF+VTD NG K+ DESV+ I ++ IH G + F + T +E
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIE 57
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q++ RI
Sbjct: 58 LTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARI 117
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTV 239
+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + + PVV+V
Sbjct: 118 KERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPTPVVSV 177
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY E+YIRHIDG+
Sbjct: 178 VNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDGS 237
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
P++SE ERQRVIQCLEAA+ RR SEG++LEL DR GLL+DVTR FRENGL VTRAEVS
Sbjct: 238 PVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVS 297
Query: 360 TERDEALNIFYVTDEMGNPA-DPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
T D+A+N FYV D G+ A D K +EA+RQ+IG + L+VK P H+K +E
Sbjct: 298 TRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPD--HRKSPPQESP--- 352
Query: 419 GGAVLLSLGSLVR-RNLYNLGLIRS 442
L S SL R R+LY+LGLIRS
Sbjct: 353 -SRFLFS--SLFRPRSLYSLGLIRS 374
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 11 DEYEKLVIRMN-TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+ Y+K +N TP V + N + ++V + R +L + V LTD+ ++ +
Sbjct: 160 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 219
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGL 129
S+G +++ ++G+ + E+ + Q LE R + GL LEL+ DRVGL
Sbjct: 220 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS--EGL-KLELSTGDRVGL 276
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LS+V + + +V A+V T + + YV+D S ++
Sbjct: 277 LSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVD 319
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/469 (46%), Positives = 293/469 (62%), Gaps = 41/469 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E+E L+ R+ PRV IDN C T+VKVDSA +HGILLE VQVLTDL+L+I K+YI SD
Sbjct: 12 EFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYICSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGL-------------- 116
G +FMDVFHVTD GNKLTDES+I YI+Q+L T G S
Sbjct: 72 GGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVSTDH 131
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA+E+TG DR G+LSE+ AVLA+LQC V A WTHN R A +IY++D SG PI DS +
Sbjct: 132 TAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITDSNK 191
Query: 177 IDRIEARLRNVLK---GDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVL---- 228
+ +E +L+NV++ G ++RS ++ + THTERRLHQ+M A DYE P
Sbjct: 192 LAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYE--PCCGCTD 249
Query: 229 ------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
R+ T V ++++ ++ YSVVN++ DR KLLFD +C LTDM+YVVFHA +++
Sbjct: 250 GDAAHQRNCTKIHV-SIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSS 308
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
G A E++IRH DG + +E ER ++ +CL AA RRAS G+RL++ +R GLL+DV
Sbjct: 309 KGTMARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLLSDV 368
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
TR FRENGL+++RAE+ + D A+ FY+TD G+ A+ +E VR++IG S L V + P
Sbjct: 369 TRVFRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVNKSP 428
Query: 403 MIYHQKGESEEQTVGVGGAV-----LLSLGSLVRRNLY----NLGLIRS 442
+ + + G+V SLGSL+ L N G IRS
Sbjct: 429 GWTPRTPSTAGISRTSSGSVGEEKPKFSLGSLLWSQLERLSGNFGSIRS 477
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/466 (45%), Positives = 287/466 (61%), Gaps = 26/466 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ P +YE L+ R++ PRV IDN C TLVKVDSA +HGILLE VQVLTDL
Sbjct: 1 MENFYKPYFDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLE 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL--- 116
L+I K+YI SDG +FMDVFHVTD GNKLTDES+I YI+Q+L G S
Sbjct: 61 LVISKSYICSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGR 120
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
TA E+TGTDR GL+SE+ AVLA+L C V A WTHN R+A +I ++D
Sbjct: 121 EMNPRHVSTEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDE 180
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKG---DNDIRSAKMTVSMAV-THTERRLHQMMFADRD 221
G PI D +++ +E +L NV++ + R ++T +A THT+RRLHQ+MFAD+D
Sbjct: 181 LKGGPIRDPERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKD 240
Query: 222 YERM-PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
YER S+D V+++N ++ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +
Sbjct: 241 YERCCGGCDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAV 300
Query: 281 NTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA 340
++ G A E++IR +DG + ++ ER RV QCL AA+ RR + G+RL++ +++R GLL+
Sbjct: 301 SSKGSIAVQEYFIRQMDGCTLGTQSERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLS 360
Query: 341 DVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE 400
D+TR FRENGL++ AE+ + A FYVTD G P +E +R++IG + + V +
Sbjct: 361 DITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNK 420
Query: 401 ---LPMIYHQKGESEEQTVGVGGAVLLSLGSL---VRRNLYNLGLI 440
P + V SLG+L + R N G I
Sbjct: 421 SSVPPSLPASPSRDRSTASSVENRPRFSLGTLWSQIERFSSNFGPI 466
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 274/402 (68%), Gaps = 18/402 (4%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EY+ + ++ P+V+IDN ATLVKV S +HG LLE VQ L D++L I K
Sbjct: 7 WPYFDPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISK 66
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE------TIHY----GRS---NS 112
AYI+SDG +FMDVFHVTD G K+ DE +I I+++L T + GRS +
Sbjct: 67 AYITSDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQT 126
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+ TA+ELTGTDR GLLSEV AVLA++ C V A+VWTHN R+A ++YV D ++ PIE
Sbjct: 127 ISEHTAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIE 186
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE----RMPVL 228
+ ++++RI +L +++G +D + A+ V+ + TH ERRLHQ+M AD D + + +
Sbjct: 187 NVRKLERILEKLNPIMQGCDDEKVARSVVAESFTHVERRLHQLMLADHDSDPSVSQSQIS 246
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P +TV+ ++++YSVV VQC DR KLLFD VCTLTD++YVV HATI +G A
Sbjct: 247 SRKQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAV 306
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRE 348
E++IR +DG + +P + +V +CLEAA+ RR+SEG+RL LC DR GLL +VTRTFRE
Sbjct: 307 QEYHIRSMDGRTL-DDPAKAKVKRCLEAAIERRSSEGLRLYLCTTDRPGLLTEVTRTFRE 365
Query: 349 NGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQK 390
NGL+VTRAEVST+ D+A+N FYVTD G P D K +EA+R++
Sbjct: 366 NGLSVTRAEVSTQGDKAVNTFYVTDVNGLPVDLKKVEAIRKE 407
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/432 (44%), Positives = 280/432 (64%), Gaps = 34/432 (7%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
MK++ WP +++ L R+N P RV IDN T+VKVDS + G+LLE VQ+LTD
Sbjct: 1 MKNVCWPYFDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNS------ 112
LNL I K+YIS D +FMDVFHV D N +KLTD+ VI+ I+Q++ T G NS
Sbjct: 61 LNLSISKSYISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTK-GPDNSAKTRRY 119
Query: 113 FNGL---------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
N L TA+E+TGTDR GL SE+ A LADL C+VVEA W+HN R+A + Y+
Sbjct: 120 VNKLLNSDNSGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYIS 179
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA---------VTHTERRLHQ 214
D ++ SPIED ++ IE L VL+ A T ++ T+ ERRLHQ
Sbjct: 180 DQSTDSPIEDPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQ 239
Query: 215 MMFADRDYE-------RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
++ + +DY+ R P + V++++ + YS+V+++CKDR +L+FD VCT
Sbjct: 240 LLVSVKDYDWTSESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCT 299
Query: 268 LTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
LTDM+YV+FHA+I++ + A+ E++IRH++G ++S+ ++ RV++CLEAA+ RR EGVR
Sbjct: 300 LTDMQYVIFHASISSKKDNAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCEGVR 359
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LELC +R GLL+D+TR RENGLNV RA+++T+ ++A+N FYV D G D +++E+V
Sbjct: 360 LELCANNRVGLLSDITRVLRENGLNVVRADIATQGEKAINAFYVKDISGKEVDMEMVESV 419
Query: 388 RQKIGLSNLKVK 399
+++IG L+VK
Sbjct: 420 KKEIGPVVLRVK 431
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 205/431 (47%), Positives = 268/431 (62%), Gaps = 33/431 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
EYE R+N PRV IDN C TLVKVDS ++GILLE +QVL+DL+L I KAYI+SD
Sbjct: 8 EYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYITSD 67
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL----------ETIHYGRS---NSFNGLTA 118
G +FMDVFHV D G K+TD+ I YIE++L + GRS +S TA
Sbjct: 68 GGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGDHTA 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL G DR GLLSE+FAVLADLQC+V+ A+VWTH R+A ++YV D +G I+D ++
Sbjct: 128 IELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPDRVA 187
Query: 179 RIEARLRNVLKGDNDIRSAKM------------TVSMAVTHTERRLHQMMFADRD----Y 222
R+E RLR+VL+G A S H +RRLHQ+M AD D
Sbjct: 188 RVEDRLRHVLRGYGGGGGAGDDDDGSGAHANFAAASSTPHHVDRRLHQLMHADVDAVHGD 247
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P VTV++ ++SYSVVNV+CKDR+KLLFD+VCTLTDMEYVVFHA +++
Sbjct: 248 GAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVSS 307
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
E YIR DG + + E ++VI+CLEAA+ RR SEG LE+C DR GLL+DV
Sbjct: 308 EANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSEGFTLEVCGRDRVGLLSDV 366
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG---LSNLKVK 399
TR RE+GL V+RA+V+T +A N+FYV + G P D K +E +R + G + N+K
Sbjct: 367 TRVLREHGLTVSRADVTTAGGQATNVFYVRNPSGQPVDMKTVEGLRGQFGQTAMLNVKSV 426
Query: 400 ELPMIYHQKGE 410
+P + E
Sbjct: 427 GVPAAVAKAAE 437
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/415 (46%), Positives = 269/415 (64%), Gaps = 15/415 (3%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ WP +YE + PRV I+N T+V+V SA RHGILL VQVLTDL+
Sbjct: 1 MENQSWPYFDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGR 109
L+I K+ + SD +F DVFHV D +GNK+ D SV+ +I+ SL + +
Sbjct: 61 LVIVKSDMFSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSS 120
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
S + T +ELTG DR GLLSE+ A+L L C+V A+VWTHN R+A +IY+ D +G
Sbjct: 121 GLSVSDHTVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGG 180
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPV 227
PI+ +++ I+ +L VL+G +D A+ + A +TH ERRLHQ+M+ DR +
Sbjct: 181 PIQTQSRLELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDRRHAGQDY 240
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R S D P + ++ +R YS+V++QCKDR KLLFD+VCTLTDM+YV+ HA IN+
Sbjct: 241 SRSSEDRPKIQIKR-NERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADT 299
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFR 347
EF+IRH +G + + P Q +I CLEAA+ RR ++G+RLELCM DR GLL++VT+ FR
Sbjct: 300 TQEFFIRHENGCTLET-PAEQHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFR 358
Query: 348 ENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
ENGL+V RA+VST D+A+N+FYV D G P + K++E +R+ IG + L+VK P
Sbjct: 359 ENGLSVARADVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVKGTP 413
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 282/439 (64%), Gaps = 30/439 (6%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG +FM VF+VTD
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 84 LNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDRVGLLSEVFAVL 137
+G+KL + VI +I++ LE+ Y G + + T++ELTG DR GLLSEV AVL
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADRPGLLSEVCAVL 130
Query: 138 ADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSA 197
A L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+V++GD
Sbjct: 131 ATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCNRG 190
Query: 198 KMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--------YPVVTVQNWADRSYSV 249
+S ERRLH +M D P V V + A+R Y+V
Sbjct: 191 GTGIS-----AERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVVVMDCAERRYTV 245
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG----ERAYLEFYIRHIDGTPISSEP 305
V ++C+DR KLLFD +C L D++YVVFH T++ G + AY E+YIRH+DG P+ S+
Sbjct: 246 VILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIRHVDGHPVRSDA 305
Query: 306 ERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEA 365
ER R+++CLEAAV RRAS G+ LE+ EDR GLL+++TR FREN L++ RA ++T +A
Sbjct: 306 ERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSIIRAAITTRDGKA 365
Query: 366 LNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLS 425
+ FYV+D GNP D + ++AV +++G + L+VK K E+E GGAV +
Sbjct: 366 EDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAE------GGAVSV- 418
Query: 426 LGSLVRRNLYNLGLIRSYS 444
LGSL++ + L LIRSYS
Sbjct: 419 LGSLLKSSFQGLRLIRSYS 437
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/454 (44%), Positives = 287/454 (63%), Gaps = 25/454 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 238 TV----QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG---ERAYLE 290
+ +R Y+VV ++C+DR +LLFD +C LTD+ YVVFH T++ G + AY E
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQE 314
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+Y+RH+DG P+ + ER R+++CLEAAV RRAS+G+ LE+ EDR GLL+++TR FREN
Sbjct: 315 YYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENS 374
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGE 410
L++ RA ++T+ EA + FYV+D GNP D K +EA+ +++G + L+VK + E
Sbjct: 375 LSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAE 434
Query: 411 SEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+G+L++ + LIRSYS
Sbjct: 435 DSGGG-----GAAAIIGNLLKGSFQGFRLIRSYS 463
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/454 (44%), Positives = 288/454 (63%), Gaps = 25/454 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 238 TVQ----NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG---ERAYLE 290
+ + +R Y+VV ++C+DR +LLFD +C LTD+ YVVFH T++ G + AY E
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQE 314
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+Y+RH+DG P+ + ER R+++CLEAAV RRAS+G+ LE+ EDR GLL+++TR FREN
Sbjct: 315 YYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENS 374
Query: 351 LNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGE 410
L++ RA ++T+ EA + FYV+D GNP D K +EA+ +++G + L+VK + E
Sbjct: 375 LSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAE 434
Query: 411 SEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+G+L++ + LIRSYS
Sbjct: 435 DSGGG-----GAASIIGNLLKGSFQGFRLIRSYS 463
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 281/449 (62%), Gaps = 25/449 (5%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
+P EYE R+N PRV IDN T+VKVDS ++GILLE VQVL+DL+L I K
Sbjct: 2 FPYFDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILK 61
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-----------GRS---N 111
AYI+SDG +FMDVFHV + G K+TD+ I YIE++L GRS +
Sbjct: 62 AYITSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMH 121
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
S TA+EL G DR GLLSE+FAVLA+LQC+V+ A+VWTH R+A ++YV D +G PI
Sbjct: 122 SIGDHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPI 181
Query: 172 E-DSQQIDRIEARLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ER 224
+ D++++ IE RLRNVL+G D D A ++ TH +RRLHQ+M AD + +
Sbjct: 182 DVDTRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFAVGSTHVDRRLHQLMNADMELVDAQ 241
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ D VTV ++ YSVVNV+C+DR+KLLFD+VCTLTDM+YVV HA +++ G
Sbjct: 242 GEGEEVADDGMSVTVGYCKEKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDG 301
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
E +IR DG + + E +V++CL+AA+ RR SEG LE+C DR GLL++VTR
Sbjct: 302 LYGVQELFIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSEGFTLEVCGRDRVGLLSEVTR 360
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS-NLKVKELPM 403
RE+GL VTRA+V+T ++A+N+FYV D G D K IE +R +IG + L VK++P
Sbjct: 361 VLREHGLTVTRADVATVGEQAMNVFYVRDASGQTVDMKTIEGLRGQIGQTVMLNVKKVPA 420
Query: 404 IYHQKGESEEQTVGVGGAVLLSLGSLVRR 432
+ E GV S GSL R
Sbjct: 421 PAVKPPEPARG--GVAKTGFFSFGSLFAR 447
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 188/336 (55%), Positives = 237/336 (70%), Gaps = 16/336 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVD----DDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY E+YI+HIDG
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDG 314
Query: 299 TPISSEPERQRVIQCLEAAVGRRASEGVRLELCMED 334
+P+ S+ ERQRVI CLEAA+ RR SE L L + D
Sbjct: 315 SPVKSDAERQRVIHCLEAAIERRVSEVRDLMLVLSD 350
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
Q + D +YE+ L + P V + N A ++ +V+ V ++ +L +VV LTD+
Sbjct: 13 QSHYMDDEYEK---LFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNL 69
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSE-----------PERQRVIQCLEA---AVG 319
++ A I++ G F + DG ++ E PE C +VG
Sbjct: 70 IITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPE-----SCFATTMRSVG 124
Query: 320 -RRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
++ + +EL DR GLL++V+ N+ AEV T A + +VTDE
Sbjct: 125 VKQTPDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDE 180
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/418 (45%), Positives = 273/418 (65%), Gaps = 27/418 (6%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E+E L+ R+ PRV +DN TL+KVDSA + GILLE VQVLTDL+L+I K+YISSD
Sbjct: 13 EFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYISSD 72
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGL-- 116
G +FM+VFHVTD G+KLTD+S+I YI+Q+L ++H +
Sbjct: 73 GGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYASTDH 132
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA+E+TGTDR GLLSE+ AVL+ L+C V + VWTHN R AS+IY++D G PI D ++
Sbjct: 133 TAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITDPKR 192
Query: 177 IDRIEARLRNVLKGDNDI---RSAKMTVSMA--VTHTERRLHQMMFADRDYERMP----- 226
+ ++ +L NV++ + + RS ++T THT RRLHQ+M+A+ DYE
Sbjct: 193 LAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGCNGG 252
Query: 227 --VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
R++ V++ + ++ YSVVNV+ +DR KLLFD +C LTDM+YVVFHA ++ G
Sbjct: 253 GLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKG 312
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
A E++IR DG + +E ER ++ QCL AA+ RR S G RL++C +R GLL++VTR
Sbjct: 313 TMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGLLSNVTR 372
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELP 402
FRENGL+++RAE+ T D A+ FYVTD G A+P+ I+ V++++G S + V + P
Sbjct: 373 AFRENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVVNKSP 430
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 273/429 (63%), Gaps = 27/429 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ P E+E L+ R+ PRV IDN TLVK DSA +HGILLE VQVLTDL+
Sbjct: 1 METTYQPYIDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL--- 116
L+I K+YISSDG +FMDVFHVTD GNKLTDES+I YI+Q+L G S
Sbjct: 61 LVISKSYISSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRRRGVSKELPTCLNR 120
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
T LE+ GTDR GLLSE+ AVL +L+C V A WTHN R AS+IY++D
Sbjct: 121 EVRPRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDG 180
Query: 166 NSGSPIEDSQQIDRIEARLRNVLK---GDNDIRSAKMTVSMA--VTHTERRLHQMMFADR 220
G PI D +++ ++ +L NV++ G + RS ++T THTERRLHQ+M+A+
Sbjct: 181 FRGGPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANI 240
Query: 221 DYERM-------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
DYE R++ V +++ ++ YSVVNV+ +DR KLLFD +C LTDM+Y
Sbjct: 241 DYEPCQGCNGGGAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQY 300
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCME 333
VVFHA +++ G A E++IR DG + ++ ER ++ QCL AA+ RR S G+RL++
Sbjct: 301 VVFHAVVSSKGTMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTH 360
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
+R GLL+D+TR FRENGL+++ AE+ T D A+ FYVTD G A+P++IE V+++IG
Sbjct: 361 NRMGLLSDLTRAFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGG 420
Query: 394 SNLKVKELP 402
S + V + P
Sbjct: 421 SIVVVNKSP 429
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 260/420 (61%), Gaps = 40/420 (9%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
EYE R+N PRV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SD
Sbjct: 8 EYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSD 67
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLT 117
G +FMDVFHV D G K+TDE I +IE++L G S +S T
Sbjct: 68 GGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHT 127
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
A+EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++
Sbjct: 128 AIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRL 187
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAV------------THTERRLHQMMFADRDYERM 225
RIE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 188 SRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDD 247
Query: 226 PVLRH-------------STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
L + + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM
Sbjct: 248 DGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMH 307
Query: 273 YVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCM 332
YVV HA++++ G E YIR DG + + E RVI+CLEAA+ RR SEG LELC
Sbjct: 308 YVVSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCG 366
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
DR GLL+DVTR RE+GL VTRA+V+T +A+N+FYV D G P D K IE +R ++G
Sbjct: 367 RDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVG 426
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 281/441 (63%), Gaps = 45/441 (10%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
MK++ WP +++ L R+ P RV IDN T+VKVDS + G+LLE VQVLTD
Sbjct: 1739 MKNVCWPYFDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTD 1798
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL-- 116
LNL I K YISSD +FMDVFHV D +G KL D++VI+YI+Q++ T + N
Sbjct: 1799 LNLTIAKGYISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAY 1858
Query: 117 -------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TA+E++GTDR GL SE+ A LADLQC++VE W+HN R+A + Y+
Sbjct: 1859 TNNIFEADHSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYIS 1918
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM---------------AVTHT 208
D +S +PIED ++ IE L VL+ N +RSA + V++
Sbjct: 1919 DPSSHTPIEDPHRLASIEDHLTTVLRA-NTVRSAGEPSQINNREVKTGGFLGGEGTVSNV 1977
Query: 209 ERRLHQMMFADRDYERMPVLRHSTDYP----------VVTVQNWADRSYSVVNVQCKDRT 258
ERRLHQ+M + RD++ P+ ST VV+++N + YS+VN++CKDR
Sbjct: 1978 ERRLHQLMLSVRDFD-GPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRR 2036
Query: 259 KLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQRVIQCLEAA 317
+L+FD +CTL DM+YV+FHA++++ + RA+ E++IRH DG ++E E++RVI+CLEAA
Sbjct: 2037 RLMFDTICTLNDMQYVIFHASVSSDHDGRAFQEYFIRHKDGYARNTESEKERVIKCLEAA 2096
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+ RR SEGV L+L E+R GLL+D+TR RENGL V RA+V+TE ++A+N FYV D GN
Sbjct: 2097 IERRVSEGVLLKLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGN 2156
Query: 378 PADPKIIEAVRQKIGLSNLKV 398
D I+++++++GL++L+V
Sbjct: 2157 EVDMGFIKSMKKEMGLTDLEV 2177
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 192/438 (43%), Positives = 281/438 (64%), Gaps = 42/438 (9%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK++ WP +++ L R+ P V IDN T+VKVDS + G+LLE VQVLTDLN
Sbjct: 1 MKNVCWPYFDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLN 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE--------------TIH 106
L I K YISSD +FMDVFHV D +G KL D++VI+YI+Q + T +
Sbjct: 61 LTIAKGYISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNN 120
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
++ + TA+E++GTDR GL SE+ A LADLQC++VE W+HN R+A + Y+ D +
Sbjct: 121 IFEADHSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPS 180
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM---------------AVTHTERR 211
S +PIED ++ IE L VL+ N +RSA + V++ ERR
Sbjct: 181 SHTPIEDPHRLASIEDHLTTVLRA-NTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERR 239
Query: 212 LHQMMFADRDYERMPVLRHSTDYP----------VVTVQNWADRSYSVVNVQCKDRTKLL 261
LHQ+M + RD++ P+ ST VV+++N + YS+VN++CKDR +L+
Sbjct: 240 LHQLMLSVRDFDG-PISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLM 298
Query: 262 FDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGR 320
FD +CTL DM+YV+FHA++++ + RA+ E++IRH DG ++E E++RVI+CLEAA+ R
Sbjct: 299 FDTICTLNDMQYVIFHASVSSDHDGRAFQEYFIRHKDGYARNTESEKERVIKCLEAAIER 358
Query: 321 RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD 380
R SEGV L+L E+R GLL+D+TR RENGL V RA+V+TE ++A+N FYV D GN D
Sbjct: 359 RVSEGVLLKLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVD 418
Query: 381 PKIIEAVRQKIGLSNLKV 398
I+++++++GL++L+V
Sbjct: 419 MGFIKSMKKEMGLTDLEV 436
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/496 (40%), Positives = 291/496 (58%), Gaps = 59/496 (11%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP +++ L R+ P RV IDN T+VKV+S + G+LLE VQ+LTD
Sbjct: 1 MQKVCWPYFDPDFDNLGERIYGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRSN 111
+NL+I K+YISSDG +FMDVFHV D +GNKLTD+SVI++I+ ++ T I +N
Sbjct: 61 MNLIITKSYISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEAN 120
Query: 112 SFNGL----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ N L TA+E+TGTDR GL SE+FA ADL C+V+EA W+HN R+A + Y
Sbjct: 121 N-NSLEPQLADHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAY 179
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT------------- 208
V D N+ +PI+D ++ IE L V++ D S V T
Sbjct: 180 VSDDNTHTPIDDPSRLASIEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMN 239
Query: 209 ---ERRLHQMMFADRDYE--------------RMPVLRHST-DYPVVTVQNWADRSYSVV 250
ERRLHQ+M + RD++ ++ H +V++ N +R YS+V
Sbjct: 240 SNMERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDHKERKTTIVSIGNCEERGYSIV 299
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRV 310
V+ KDR +L+FD +CTL DM+YV+FHA + + G A+ E++IRHIDG +++E E++RV
Sbjct: 300 TVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERV 359
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
I+CLEAA+ RR EGV+LELC E+R GLL+D+TR RENGL V RA+V T+ ++LN FY
Sbjct: 360 IKCLEAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFY 419
Query: 371 VTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVL------- 423
V D GN D + +E+V++++ +L+VK G S+E T
Sbjct: 420 VRDISGNKIDMEFVESVKKEMRPIHLEVKNEDTKIDTVG-SDEPTASASATPQRQPQPHR 478
Query: 424 LSLGSLVRRNLYNLGL 439
SLG ++R + L L
Sbjct: 479 FSLGDILRSQMERLSL 494
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 204/466 (43%), Positives = 284/466 (60%), Gaps = 35/466 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV I+N CP T+VKVDSA R GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQ---------------SLETIHYGRSNSFNGL 116
G + MDVFHVTD G KLTDE+++ +I+Q S + + N
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVPKEN 131
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TALE++ TDR GLLSE+ AVL +L CSV A WTHN R+A +I+++D +S PI D ++
Sbjct: 132 TALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPISDPER 191
Query: 177 IDRIEARLRNVLKGDNDIRSAK----MTVSMAVTHTERRLHQMMFADRDYERMPVL---- 228
+ +E +L NV+ + K T+ THTERRLHQ+M+ADRDYE
Sbjct: 192 LGLVEEQLENVVAAHGETGQKKSVRVTTLGTGRTHTERRLHQLMYADRDYESCRACDGDS 251
Query: 229 ----RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ D V+V D+ Y VVNV+ +DR KLLFD VC LTDM+YVVFHA I++
Sbjct: 252 SGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKR 311
Query: 285 ERAYLEFYIRHIDGT-PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVT 343
A+ E++IR+ G+ + SE E++ + CL AA+ RR S G+ +++ ++R GLL++VT
Sbjct: 312 SMAHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVSHGLMVDIRTDNRMGLLSNVT 371
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPM 403
R FRENGL+++R E+ TE ++A+ F+VTD G +P I+E VRQ G S + + P
Sbjct: 372 RVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEEVNPDIVELVRQASGGSVVTDHKSPH 431
Query: 404 IYHQKGESEE--QTVG-VGGAVLLSLGSLVRRNLYNL----GLIRS 442
HQ S + +T+G + SLGSL+ L L G +RS
Sbjct: 432 RVHQSSSSSDINETMGSMEPKPKFSLGSLLWSRLERLSGGFGPLRS 477
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 224/467 (47%), Positives = 288/467 (61%), Gaps = 40/467 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE+EKLVIRMN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 14 VDEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYIS 73
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN--------------G 115
SDG +FMDVFHV D GNKL D VI IEQSL S SF
Sbjct: 74 SDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGA----GSLSFRATDAETETAAAAMAQ 129
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE--- 172
TA+EL G DR GLLSEVFAVL +L+C++ ++VWTH+GR+A+L+ V D ++G+ IE
Sbjct: 130 ATAIELVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDD 189
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD-----RDYERMPV 227
D +++D ++ LR+VL+G R+A H RRLHQMM AD
Sbjct: 190 DPERLDTVKRLLRHVLRG----RAAVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDE 245
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ VV V+ A+R Y+VVNV+C+DR KLLFD VCTLTDM+YVVFH T+ G A
Sbjct: 246 EEEDCEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEA 305
Query: 288 YLEFYIRHIDGTPISSEPERQRVI--QCLEAAVGRRASEG-VRLELCMEDRQGLLADVTR 344
Y EFYIRH+D +S R +CL+AA+ RR +EG V LEL EDR GLL+DVTR
Sbjct: 306 YQEFYIRHLDDGAAASASAADRARLRRCLQAAIQRRNTEGVVGLELRCEDRPGLLSDVTR 365
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGN-PADPKIIEAVRQKIGLSNLKVKE--L 401
FRE+GL+VT AEV+T +A ++F V G+ P + ++AVR ++G L +K+ L
Sbjct: 366 VFREHGLSVTHAEVATWGTQAADVFRVVTASGDAPVPARAVDAVRAEVGEDILFIKDDTL 425
Query: 402 PMIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNLGLIRSYS 444
+ G T GG SLG+++R + L+NLGLIRS S
Sbjct: 426 AASANAVGGPVSPTGRGGGDGRRSLGNMIRSRSEKFLFNLGLIRSCS 472
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/359 (51%), Positives = 245/359 (68%), Gaps = 12/359 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MN PRVV+DN C TATLV+V SAR+HG+LL+AV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSFNGLTA-----LELTGTD 125
GR+FMDVFHV D G K+ D ++++ +E SL A LEL G D
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAAGAGTPTLLELVGAD 129
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYP---VVTVQN 241
+VL+G + + + + + +RRLHQ++ D + R + P V VQ+
Sbjct: 190 HVLRG-GALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQD 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T + A EFYIR +D PI
Sbjct: 249 WVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPI 308
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
SS ER+RVIQCLEAA+ RRASEGVRLEL + DR+GLLA VTR FREN L+VT AE++T
Sbjct: 309 SSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEITT 367
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 286/464 (61%), Gaps = 34/464 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+ E L+ R+ PRV IDN TLVKVDSA +HGILLE VQVLTDL+L+I K+YISSD
Sbjct: 14 QLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYISSD 73
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------ETIHYGRSNSFNGLTAL 119
G +FMDVFHVTD GNKLTDES+I YI+Q+L + G+ TA
Sbjct: 74 GGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAA 133
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+TG DR GLLSE+FAVL +L C+V A WTH+ + AS+IY+++ +G I+DS+++
Sbjct: 134 EITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAH 193
Query: 180 IEARLRNVL---KGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------PVLR 229
++ +L NV+ G + S K+T S TH ERRLHQ+M+A+ DYE+ +
Sbjct: 194 VQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSKSCK 253
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
S V +++ ++ YS++N++ +DR KLLFD VC LTD++YVVFHA +++ G AY
Sbjct: 254 MSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAYQ 313
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFREN 349
E++IR G + SE ER+R++Q L AA+ RR S G+RLELC +R GLL+D+TR FREN
Sbjct: 314 EYFIRQKGGCILDSESERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVFREN 373
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGN--PADPKIIEAVRQKIGLSNLKVKELPMIYHQ 407
G +++ +V T A+ ++TD G+ DP I++ V ++IG S + V + P +
Sbjct: 374 GFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGS-IAVVQGPSKWDD 432
Query: 408 KGESEEQTVGVGGAVL-----LSLGSLVRRNL----YNLGLIRS 442
+ S G A + SLG+L+ L N G I+S
Sbjct: 433 RTSSSRANHGTKVARVEDKPRFSLGNLLWSQLERLSTNFGSIKS 476
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D E C D+ + + V I++ +++ + S R +L + V LTDL +
Sbjct: 239 DYEQCRCHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYV 298
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A +SS+G + + G L ES + Q+L R + +GL LEL
Sbjct: 299 VFHAAVSSNGTVAYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVS--HGLR-LELC 355
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
+RVGLLS++ V + S+ V T+ R I++ D
Sbjct: 356 ALNRVGLLSDITRVFRENGFSISTMDVKTNGKRAIGSIFITD 397
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/464 (43%), Positives = 286/464 (61%), Gaps = 34/464 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+ E L+ R+ PRV IDN TLVKVDSA +HGILLE VQVLTDL+L+I K+YISSD
Sbjct: 14 QLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYISSD 73
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------ETIHYGRSNSFNGLTAL 119
G +FMDVFHVTD GNKLTDES+I YI+Q+L + G+ TA
Sbjct: 74 GGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAA 133
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+TG DR GLLSE+FAVL +L C++ A WTH+ + AS+IY+++ +G I+DS+++
Sbjct: 134 EITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAH 193
Query: 180 IEARLRNVL---KGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERM------PVLR 229
++ +L NV+ G + S K+T S TH ERRLHQ+M+A+ DYE+ +
Sbjct: 194 VQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSKSCK 253
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
S V +++ ++ YS++N++ +DR KLLFD VC LTD++YVVFHA +++ G AY
Sbjct: 254 MSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAYQ 313
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFREN 349
E++IR G + SE ER+R++Q L AA+ RR S G+RLELC +R GLL+D+TR FREN
Sbjct: 314 EYFIRQKGGCILDSECERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVFREN 373
Query: 350 GLNVTRAEVSTERDEALNIFYVTDEMGN--PADPKIIEAVRQKIGLSNLKVKELPMIYHQ 407
G +++ +V T A+ ++TD G+ DP I++ V ++IG S + V + P +
Sbjct: 374 GFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIGGS-IAVVQGPSKWDD 432
Query: 408 KGESEEQTVGVGGAVL-----LSLGSLVRRNL----YNLGLIRS 442
+ S G A + SLG+L+ L N G I+S
Sbjct: 433 RTSSSRANHGTKVARVEDKPRFSLGNLLWSQLERLSTNFGSIKS 476
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D E C D+ + + V I++ +++ + S R +L + V LTDL +
Sbjct: 239 DYEQCRCHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYV 298
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A +SS+G + + G L E + Q+L R + +GL LEL
Sbjct: 299 VFHAAVSSNGTVAYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVS--HGLR-LELC 355
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
+RVGLLS++ V + S+ V T+ R I++ D
Sbjct: 356 ALNRVGLLSDITRVFRENGFSISTMDVKTNGKRAIGSIFITD 397
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/418 (47%), Positives = 258/418 (61%), Gaps = 40/418 (9%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+ L+ +T RV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SDG
Sbjct: 139 QALLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGG 198
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLTAL 119
+FMDVFHV D G K+TDE I +IE++L G S +S TA+
Sbjct: 199 WFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAI 258
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++ R
Sbjct: 259 ELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSR 318
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAV------------THTERRLHQMMFADRDYERMPV 227
IE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 319 IEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDG 378
Query: 228 LRH-------------STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
L + + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM YV
Sbjct: 379 LDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYV 438
Query: 275 VFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMED 334
V HA++++ G E YIR DG + + E RVI+CLEAA+ RR SEG LELC D
Sbjct: 439 VSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRD 497
Query: 335 RQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
R GLL+DVTR RE+GL VTRA+V+T +A+N+FYV D G P D K IE +R ++G
Sbjct: 498 RVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVG 555
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/458 (42%), Positives = 277/458 (60%), Gaps = 65/458 (14%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP +++ L R+ P RV IDN T+VKV+S + G+LLE VQ+LTD
Sbjct: 1 MQKVCWPYFDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET------------IH 106
+NL+I K+YISSDG +FMDVFHV D GNKLTD+SVI++I+ ++ T H
Sbjct: 61 MNLIITKSYISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAH 120
Query: 107 YGRSNSFNGL----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRI 156
+N N L TA+E+TGTDR GL SE+FA ADL C+V+EA W+HN R+
Sbjct: 121 NNPNN--NSLESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARL 178
Query: 157 ASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT-------- 208
A + YV D N+ +PI+D ++ IE L V++ +D S V T
Sbjct: 179 ACIAYVSDDNTHTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQG 238
Query: 209 --------ERRLHQMMFADRDYERMPVL-------------------RHSTDYPVVTVQN 241
ERRLHQ+M + RD++ P R +T +V++ N
Sbjct: 239 KGCMNSNVERRLHQLMLSVRDFDE-PFCEPSSLSLLSSKLEYCDQKERKTT---IVSIGN 294
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
+R YS+V V+ KDR +L+FD +CTL DM+YV+FHA + + G A+ E++IRHIDG +
Sbjct: 295 CEERGYSIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRAL 354
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
++E E++RVI+CLEAA+ RR EGV+LELC E+R GLL+D+TR RENGL V RA+V T+
Sbjct: 355 NTEGEKERVIKCLEAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQ 414
Query: 362 RDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVK 399
++LN FYV D GN D + +E+V++++ +L+VK
Sbjct: 415 GQKSLNAFYVRDISGNKIDMEFVESVKKEMRPIHLEVK 452
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/418 (47%), Positives = 258/418 (61%), Gaps = 40/418 (9%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+ L+ +T RV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SDG
Sbjct: 139 QALLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGG 198
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLTAL 119
+FMDVFHV D G K+TDE I +IE++L G S +S TA+
Sbjct: 199 WFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAI 258
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++ R
Sbjct: 259 ELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSR 318
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAV------------THTERRLHQMMFADRDYERMPV 227
IE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 319 IEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDG 378
Query: 228 LRH-------------STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
L + + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM YV
Sbjct: 379 LDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYV 438
Query: 275 VFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMED 334
V HA++++ G E YIR DG + + E RVI+CLEAA+ RR SEG LELC D
Sbjct: 439 VSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRD 497
Query: 335 RQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
R GLL+DVTR RE+GL VTRA+V+T +A+N+FYV D G P D K IE +R ++G
Sbjct: 498 RVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVG 555
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 278/443 (62%), Gaps = 43/443 (9%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP ++++L R+ P RV IDN ++VKVDS + G+LLE VQVLTD
Sbjct: 1 MQKVCWPYFDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNS------ 112
LNL I K+YISSD +FMDVFHV D G KLTD+ VI YI Q++ T +S +
Sbjct: 61 LNLTISKSYISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATPKSYV 120
Query: 113 ---FNG-----LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
F G TA+E++GTDR GL SE+ A L DL C++VEA W+HN R+A + Y+ D
Sbjct: 121 NDVFEGEHSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISD 180
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAK-------MTVSMAVTHTERRLHQMMF 217
++ +PI+D ++ IE L V++ +++ + VT+ ERRLHQ+M
Sbjct: 181 QSTDTPIDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLML 240
Query: 218 ADRDYERMPVLRHSTDYP-------------------VVTVQNWADRSYSVVNVQCKDRT 258
+ RD++ + P VV++ N ++ YS+V+++CKDR
Sbjct: 241 SARDFDGPLGSSITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRP 300
Query: 259 KLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQRVIQCLEAA 317
+L+FD VCTLTDM+YV+FHA+I + A+ E++IR+IDG +++E E++RVI+CLEAA
Sbjct: 301 RLMFDTVCTLTDMQYVIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAA 360
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+ RR EGV++ELC E+R GLL+D+TR RENGL V RA+V+T+ ++A+N FYV D GN
Sbjct: 361 IERRVCEGVKVELCAENRVGLLSDITRVLRENGLTVVRADVATQGEKAVNAFYVRDISGN 420
Query: 378 PADPKIIEAVRQKIGLSNLKVKE 400
D ++++++++G NL+VK+
Sbjct: 421 EVDMGFVKSMKKEMGAINLEVKK 443
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 274/434 (63%), Gaps = 46/434 (10%)
Query: 12 EYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
E+++L R+ P RV IDN TLVKV+S + GILLE V+VLTD+NL I K+YIS
Sbjct: 15 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 74
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI-----------HYGRSNSFNGLTA 118
SD +FM VFHV D +GNKLTD+ VI+YI+Q++ T + S + TA
Sbjct: 75 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 134
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+E++G DR GL SE+ A LADLQ ++VEA WTHN R+A + Y+ D ++ S IED ++
Sbjct: 135 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 194
Query: 179 RIEARLRNVLKGDN-------DIRSAKMTVSMAVTH-TERRLHQMMFADRDYE--RMPVL 228
+IE L VL N +++ A + V A T ERRLHQ+M + D+E P
Sbjct: 195 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 254
Query: 229 RHSTDYP-------------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
S++ P +V++++ +R YS+V+++CKDR +L+FDVVCT+TDM+Y++
Sbjct: 255 S-SSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLI 313
Query: 276 FHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDR 335
FH + + G A E++IRHIDG ++SE E++ V++CLEAA+ RR EGVRLELC +R
Sbjct: 314 FHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNR 373
Query: 336 QGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD---------PKIIEA 386
GLL+D+TR RENGL V RA+V T+ ++A+N FYV D GN D K IE+
Sbjct: 374 LGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIES 433
Query: 387 VRQKIGLSNLKVKE 400
V++++G +L VK+
Sbjct: 434 VKKEMGPIDLAVKK 447
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 274/434 (63%), Gaps = 46/434 (10%)
Query: 12 EYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
E+++L R+ P RV IDN TLVKV+S + GILLE V+VLTD+NL I K+YIS
Sbjct: 12 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 71
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI-----------HYGRSNSFNGLTA 118
SD +FM VFHV D +GNKLTD+ VI+YI+Q++ T + S + TA
Sbjct: 72 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 131
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+E++G DR GL SE+ A LADLQ ++VEA WTHN R+A + Y+ D ++ S IED ++
Sbjct: 132 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 191
Query: 179 RIEARLRNVLKGDN-------DIRSAKMTVSMAVTH-TERRLHQMMFADRDYE--RMPVL 228
+IE L VL N +++ A + V A T ERRLHQ+M + D+E P
Sbjct: 192 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 251
Query: 229 RHSTDYP-------------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
S++ P +V++++ +R YS+V+++CKDR +L+FDVVCT+TDM+Y++
Sbjct: 252 S-SSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLI 310
Query: 276 FHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDR 335
FH + + G A E++IRHIDG ++SE E++ V++CLEAA+ RR EGVRLELC +R
Sbjct: 311 FHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNR 370
Query: 336 QGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD---------PKIIEA 386
GLL+D+TR RENGL V RA+V T+ ++A+N FYV D GN D K IE+
Sbjct: 371 LGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIES 430
Query: 387 VRQKIGLSNLKVKE 400
V++++G +L VK+
Sbjct: 431 VKKEMGPIDLAVKK 444
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/460 (44%), Positives = 278/460 (60%), Gaps = 41/460 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV IDN C T+VKVDSA R GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------------ETIHYGRSNSF 113
G + MDVFHVTD G KLTDE+++ +I+Q L + + N
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQNVA 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TALE++ TDR GLLSE+ AVL +L SV A WTHN R+A +I+++D +S PI D
Sbjct: 132 MENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGPISD 191
Query: 174 SQQIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
+++ +E +L NV+ N +R T+ THTERRLHQ+M+ADRDYE
Sbjct: 192 PKRLGLVEEQLENVVAAHGETGQKNSVRVT--TLGTGRTHTERRLHQLMYADRDYESC-- 247
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ D V+V D+ Y VVNV+ +DR KLLFD VC LTDM+YVVFHA I++ A
Sbjct: 248 --RACDRTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSMA 305
Query: 288 YLEFYIRHIDGT-PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTF 346
E++IRH G+ + SE E + + CL AA+ RR S G+ +++ E+R GLL++VTR F
Sbjct: 306 DQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVSRGLMVDIRTENRMGLLSNVTRVF 365
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYH 406
RENGL+++R E+ TE ++A+ F+VTD G +P I+E VRQ G S + + P H
Sbjct: 366 RENGLSISRFEIGTEGEKAVGSFFVTDSSGEQVNPNIVELVRQASGGSVVTDHKSP---H 422
Query: 407 QKGESEEQTVGVGGAVLLSLGSLVRRNLYNL----GLIRS 442
+ +S+ + SLGSL+ L L G IRS
Sbjct: 423 RVRQSQSD---IEAKPKFSLGSLLWSRLERLSGGFGPIRS 459
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 244/377 (64%), Gaps = 29/377 (7%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PASFR----------------RAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 173
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 174 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 229
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR DG PISSE E
Sbjct: 230 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAE 289
Query: 307 RQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
RQ VI+CL+AA+ RRASEGVRLEL + DR+GLLA VTR FRENGL+VT AE++T D A+
Sbjct: 290 RQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAM 349
Query: 367 NIFYVTDEMGNPADPKI 383
+ PA P I
Sbjct: 350 T---SSTSPTWPAAPPI 363
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 184/418 (44%), Positives = 258/418 (61%), Gaps = 37/418 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L R++ RV IDN C T+VKVDSA ++GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------ETI---------HYGRSNSFNGL 116
G +FMDVFHVTD G KLTD +++ IE+ L E I Y +S +
Sbjct: 72 GGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYSKQI 131
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TALE++G DR GLLSE+ AVL ++ C+V A WTHNGR+A ++YV++ + PI
Sbjct: 132 VSTENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKPGPI 191
Query: 172 EDSQQIDRIEARLRNVL-----KGD-NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
D +++ +++ +L +V+ KG+ N++R THTERRLHQ+M+ADRDYE
Sbjct: 192 RDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGR--THTERRLHQLMYADRDYEGC 249
Query: 226 PVL--------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
+ D V++ DR Y VVN+ C+DR KL FD VC L DM+YVVFH
Sbjct: 250 RACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYVVFH 309
Query: 278 ATINTAGERAYLEFYIRH-IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQ 336
A I++ A E+YIRH +G + ++ ER+++I C+ AA+ RR S G+R+++C E++
Sbjct: 310 AAISSKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVSHGLRVDICTENKT 369
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLS 394
GLL+ VTR RENGL++ R E+ D+ + FYV D G P I+E +RQ+ G S
Sbjct: 370 GLLSKVTRVIRENGLSIPRVEIGMRGDDVVGTFYVRDPSGQEVKPNIVELLRQECGGS 427
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 249/376 (66%), Gaps = 11/376 (2%)
Query: 76 MDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSFNGL----TALELTGTDRVGLL 130
MDVFHV D G K+ D ++++ +E SL T LEL G DR GLL
Sbjct: 1 MDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAGAGTPTLLELVGADRPGLL 60
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR+VL+G
Sbjct: 61 SEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHVLRG 120
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ + + A + +RRLHQ++ D + + V VQ+W +R YSVV
Sbjct: 121 -GALGARMVRADAAAVNMDRRLHQLLNEDGEAGSRADQAEAPTPTAVAVQDWGERGYSVV 179
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRV 310
V C+DR KLLFDVVCTLTD++YVV+H T +T + A EFYIR +D PISS ER+RV
Sbjct: 180 TVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPISSATERRRV 239
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
IQCL+AA+ RRASEGVRLEL + DR+GLLA VTR FREN L+VT A ++T D A+N+F+
Sbjct: 240 IQCLQAAIERRASEGVRLELRINDRRGLLAYVTRVFRENSLSVTHAVITTRGDMAMNVFH 299
Query: 371 VTDEMGNPADPKIIEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGVGGAVLLSLGS 428
VTD G PADPK I+ V Q+IG +L+V E P + +G++ GA + SLGS
Sbjct: 300 VTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGG---GAGIFSLGS 356
Query: 429 LVRRNLYNLGLIRSYS 444
LV++NL +LGLIRS S
Sbjct: 357 LVKKNLVSLGLIRSCS 372
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/318 (52%), Positives = 223/318 (70%), Gaps = 10/318 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 189
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 190 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 245
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A EFYIR DG PISSE E
Sbjct: 246 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAE 305
Query: 307 RQRVIQCLEAAVGRRASE 324
RQ VI+CL+AA+ RRASE
Sbjct: 306 RQHVIRCLQAAIERRASE 323
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 284/496 (57%), Gaps = 70/496 (14%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M + P E++ L R++ P RV +DN T+VKVDS + G+LLE VQ+LTD
Sbjct: 1 MNSVCMPYFDPEFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS-------- 110
+NL I K++ISSD +FMDVFHV D NGNKLTD+ VI+ I+Q++ GRS
Sbjct: 61 MNLQICKSFISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAI-----GRSRASSPSQQ 115
Query: 111 -----------------------------NSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
N + TA+E+TG DR GL SE+ A LADL
Sbjct: 116 HSNNNNNNSVFTTMTNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLH 175
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK---------GDN 192
C++VEA W+HN R+A + Y+ D ++ + I+D ++ IE L VL+ G N
Sbjct: 176 CNIVEAHAWSHNARLACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGAN 235
Query: 193 --DIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP-VVTVQNWADRSYS 248
D++++++ +T ERRLHQ+M + RD+E + +V+V++ + YS
Sbjct: 236 HPDVKTSELLGGEGQMTTVERRLHQLMLSVRDFETPSSPKEKKGRKRMVSVESCEQKGYS 295
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
+V+++CKDR +L+FD VCTLTDM+YV+FHA+I + A E++IRH+DG + + E++
Sbjct: 296 IVSIECKDRPRLMFDTVCTLTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKE 355
Query: 309 RVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNI 368
RV++CLEAA+ RR EG+RLELC ++R GLL+D+TR RENGL V RA+V T ++++N
Sbjct: 356 RVMKCLEAAIERRVCEGIRLELCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNA 415
Query: 369 FYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMI--YHQKGESEEQTVGVGGAVLLSL 426
FYV D GN D IE SN KE+ I H K ++ + LS
Sbjct: 416 FYVRDISGNEVD---IEY------FSNSVKKEMGPIATLHVKNDTNRRKPNSPKQAPLSF 466
Query: 427 GSLVRRNL--YNLGLI 440
G ++R + ++ G I
Sbjct: 467 GGMLRSRIERFSHGFI 482
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 257/421 (61%), Gaps = 37/421 (8%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E LV R+N PRV +DN P TL+KVDSA ++GILL+ VQVL DL+L+I K
Sbjct: 8 PRIDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKC 67
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGL---- 116
YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G +SN +
Sbjct: 68 YISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRH 127
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI
Sbjct: 128 VSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPI 187
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMT---------VSMAVTHTERRLHQMMFADRDY 222
D + +++ L V++ + + V + HTERRLH++M+ + DY
Sbjct: 188 IDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDY 247
Query: 223 ERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
E + R + VT++ A YS+VNV+C+DR KLLFD VC L ++
Sbjct: 248 ENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKEL 305
Query: 272 EYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELC 331
++VVFHA G A E++IR +G + +E +R+R+ CL AA+ RRAS+G++LE+
Sbjct: 306 QFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIR 365
Query: 332 MEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
E++ GLL+DVTR RENGL++TRAE+ T+ + A+ FYVTD G P +EAV +++
Sbjct: 366 TENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVREL 425
Query: 392 G 392
G
Sbjct: 426 G 426
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 241/375 (64%), Gaps = 28/375 (7%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-- 102
++GILLE +QVL+DL+L I KAYI+SDG +FMDVFHV D G K+TD+ I YIE++L
Sbjct: 3 KNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGP 62
Query: 103 --------ETIHYGRS---NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ GRS +S TA+EL G DR GLLSE+FAVLADLQC+V+ A+VWT
Sbjct: 63 ESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEVWT 122
Query: 152 HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRS-----------AKMT 200
H R+A ++YV D +G I+D ++ RIE RLR+VL+G A T
Sbjct: 123 HRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHANFT 182
Query: 201 -VSMAVTHTERRLHQMMFADRDYERMPVLRHS--TDYPVVTVQNWADRSYSVVNVQCKDR 257
S H +RRLHQ+M AD D L D P VTV++ ++SYSVVNV+C+DR
Sbjct: 183 DASSTPHHLDRRLHQLMHADVDVAPAAALAAGGQGDRPEVTVEHCEEKSYSVVNVKCRDR 242
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAA 317
+KLLFD+VCTLTDMEYVVFHA +++ E YIR DG + + E ++VI+ LEAA
Sbjct: 243 SKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRSLEAA 301
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+ RR SEG LE+ DR GLL+DVTR RE+GL V+RA+V+TE +A N+FYV D G
Sbjct: 302 ISRRVSEGFTLEVRGRDRVGLLSDVTRVLREHGLTVSRADVTTEGGQATNVFYVRDPSGQ 361
Query: 378 PADPKIIEAVRQKIG 392
P D K +E +R + G
Sbjct: 362 PVDMKTVEGLRGQFG 376
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ + ++V V R +L + V LTD+ ++ A +SS+ + + ++
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I I S F LE+ G DRVGLLS+V VL +
Sbjct: 280 RKDGKTLLKDEAEKVIRSLEAAISRRVSEGFT----LEVRGRDRVGLLSDVTRVLREHGL 335
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV+D SG P++
Sbjct: 336 TVSRADVTTEGGQATNVFYVRD-PSGQPVD 364
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/443 (41%), Positives = 266/443 (60%), Gaps = 38/443 (8%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E LV R+N PRV +DN P TL+KVDSA ++GILL+ VQVL DL+L+I K
Sbjct: 8 PRIDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKC 67
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGL---- 116
YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G +SN +
Sbjct: 68 YISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRH 127
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI
Sbjct: 128 VSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPI 187
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMT---------VSMAVTHTERRLHQMMFADRDY 222
D + +++ L V++ + + + HTERRLH++M+ + DY
Sbjct: 188 IDPIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDY 247
Query: 223 ERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
E + R + VT++ A YS+VNV+C+DR KLLFD VC L ++
Sbjct: 248 ENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKEL 305
Query: 272 EYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELC 331
++VVFHA G A E++IR +G + +E +R+R+ CL AA+ RRAS G++LE+
Sbjct: 306 QFVVFHAVAGAKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRASRGLKLEIR 365
Query: 332 MEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
E++ GLL+DVTR RENGL++TRAE+ T+ + A+ FYVTD G + +EAV +++
Sbjct: 366 TENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETNANAVEAVVREL 425
Query: 392 GLSNLK-VKELPMIYHQKGESEE 413
G + + VK + M+ + G + +
Sbjct: 426 GGAVVSAVKAVGMVPTRMGSTSD 448
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 249/458 (54%), Gaps = 56/458 (12%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ ++ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----YGRSNSF--- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+Q+L +G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTC 120
Query: 114 ------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ +LE T DR GLLS + VL D C V + WTH+GR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLY 180
Query: 162 VKDCNSGSPIEDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRLHQM 215
V + Q + IE + V+ + A+ V M+ HTERRLHQ+
Sbjct: 181 VTMTAAAEAQPPHQSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQL 240
Query: 216 MFADRDYERMPV----------------------------LRHSTDYPVVTVQNWADRSY 247
M DRDYE P R VT+ NW +R Y
Sbjct: 241 MHDDRDYESGPAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGY 300
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+VV + +DR KLLFD VC LTDM+YVVFHAT+ + G A E+YIRH DG + S ER
Sbjct: 301 AVVKMTSRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAER 360
Query: 308 QRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALN 367
Q+V +CL AAV RRAS GVR+E+ DR GLL+D TR RE+GL++ R E+ ++DEA+
Sbjct: 361 QKVSRCLVAAVERRASHGVRVEVRAADRSGLLSDFTRILREHGLSLLRVELKRQKDEAVG 420
Query: 368 IFYVTDEMGNPADPKIIEAVRQKIGLSNLKV---KELP 402
FY+ + G P+++ AVR ++G + + KE P
Sbjct: 421 TFYLVTDSGGEVRPEVVRAVRARVGEMGISLEVAKEAP 458
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/468 (42%), Positives = 285/468 (60%), Gaps = 36/468 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRV IDN + T ++VDS HG LL VQV+TDLNL+++KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHY--GRSNSFN-----------G 115
DG +FMDVF+VTD +G K+TDE+ ++YI+ +LE+ +Y R NS +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DS 174
+++ELTGTDR GLLSEV AVL+D++C+VV A +WT N R+A+++ V D +G I D
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 QQIDRIEARLRNVLKGDNDIR-----SAKMTVSMAVTHTERRLHQMMFADR-------DY 222
++ I RL ++L+ + S S+ H ERRLHQ+M AD D
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDG 247
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ +T VV V + A R Y+ V V+C+D KLLFD VCT+TD +YVV+H ++T
Sbjct: 248 AYLQPAPGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVST 307
Query: 283 A--GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA 340
G AY E+Y+R+ G ++EPER + + LEAAV RR ++G+ LE+ DR GLL+
Sbjct: 308 EPDGVTAYQEYYVRNKAGL-AATEPERLLLKRQLEAAVERRFADGIELEVRSGDRAGLLS 366
Query: 341 DVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG--NPADPKIIEAVRQKIGLSNLKV 398
DVTR RENGL + RA V ++ EA++ FYV+D MG P +P+ I+ +R +IG + L+V
Sbjct: 367 DVTRIIRENGLTILRAGVKSQGGEAVDTFYVSDPMGLDYPVEPRTIDTIRAQIGEATLRV 426
Query: 399 KELPM-IYHQKGESEEQTVGVGGAVLLSLGSLVR--RNLYNLGLIRSY 443
K+ P Q+ + + V GA+ LGS+ + R +L L++ Y
Sbjct: 427 KKNPFADADQQQQQHDAAASVVGAIAFILGSVYKFYRPFQSLALVKLY 474
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 264/499 (52%), Gaps = 64/499 (12%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ ++ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNS-------- 112
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+Q+L + + RS S
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQAL--LPFQRSGSGPSPKFTT 118
Query: 113 ------------FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLI 160
+ +LE T DR GLLS + VL D C V + WTH+GR A ++
Sbjct: 119 CLGNVVGPGGPDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVL 178
Query: 161 YVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRLHQM 215
YV + S + RIE + V+ ++ + V M+ HTERR+HQ+
Sbjct: 179 YVTATGADSAALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQL 238
Query: 216 MFADRDYERMPVL--------------------RHSTDYPVVTVQNWADRSYSVVNVQCK 255
M D DYE P H T+ VT+ NW ++ Y++V + +
Sbjct: 239 MHDDGDYESSPAPTPVDEEHFCMGDRAATAARSAHRTET-RVTIDNWEEKGYAIVKMTSR 297
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLE 315
DR KLLFD VC LTDM YVVFHAT+ G A E+YIRH DG + S ERQ+V +CL
Sbjct: 298 DRPKLLFDTVCALTDMHYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLV 357
Query: 316 AAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
AAV RRAS GVR+E+ DR GLL+D TR RE+GL++ R E+ +++EA+ F++ +
Sbjct: 358 AAVERRASHGVRVEVRAADRSGLLSDFTRALREHGLSLLRVEIKRQKEEAIGTFFLVTDT 417
Query: 376 GNPADPKIIEAVRQKI---GLSNLKVKE---LPMIYHQK------GESEEQTVGVGGAVL 423
G P+ + AVR ++ G+S KE P + + + E +G +
Sbjct: 418 GGEVRPEALRAVRTRVAEMGISLDVAKEAFGWPPVRKTRALAPSPADQERPRYSLGSLLW 477
Query: 424 LSLGSLVRRNLYNLGLIRS 442
LG L N G IRS
Sbjct: 478 SHLGKLSN----NFGYIRS 492
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 205/295 (69%), Gaps = 16/295 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERV----DDDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY + I
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVYII 309
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
Q + D +YE+ L + P V + N A ++ +V+ V ++ +L +VV LTD+
Sbjct: 13 QSHYMDDEYEK---LFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNL 69
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSE-----------PERQRVIQCLEAAVGRRA 322
++ A I++ G F + DG ++ E PE V ++
Sbjct: 70 IITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGV-KQT 128
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
+ +EL DR GLL++V+ N+ AEV T A + +VTDE
Sbjct: 129 PDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDE 180
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 251/415 (60%), Gaps = 36/415 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV IDN T+VK+DSA RHGILLE VQVLTDL+ +I K+YISSD
Sbjct: 12 EIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-----GLT--------- 117
G + MDVFHVTD +GNKLTD ++ YI+Q T+ RSNS LT
Sbjct: 72 GGWLMDVFHVTDHDGNKLTDRGLVHYIQQ---TLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 118 --ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
A+ELT ++ GL SE+ AVL L +V A WTHN R+A +I+++D PI +++
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 QIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL- 228
++ +++ LRNV+K + +R + HTERRLHQMM+AD DYER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACH 247
Query: 229 --------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
+ + VTV + ++ Y VVNV+ +DR KLLFD VC LTDM+Y VFHA +
Sbjct: 248 VGDRNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAV 307
Query: 281 NTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLA 340
++ G A E+++R + + +E E+Q++ CL AA+ RR S G+++++ E+ GLL+
Sbjct: 308 SSNGSMADQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVSHGLKVDIRAENTTGLLS 367
Query: 341 DVTRTFRENGLNVTRAEVSTERDE-ALNIFYVTDEMGNPADPKIIEAVRQKIGLS 394
VTR RENGL++T+ ++ E DE A+ F V + G +P I E VR++ G S
Sbjct: 368 KVTRVIRENGLSITKVQIGVESDEMAVGSFCVANSSGQEVNPNIAELVRRETGGS 422
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 242/444 (54%), Gaps = 57/444 (12%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY----GRSNSF--- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTC 120
Query: 114 ------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ ALE T DR GLLS + VLAD C V + WTH+GR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLY 180
Query: 162 V----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRL 212
V + + + + IE + V+ + + VSM+ HTERRL
Sbjct: 181 VTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRL 240
Query: 213 HQMMFADRDYERMPVLRHSTDYPV------------------------VTVQNWADRSYS 248
HQ+M DRDYE P PV V++++W +R Y+
Sbjct: 241 HQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYA 295
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
VV + +DR KLLFD VC LTDM YVVFHAT+ + G A E+YIRH DG + S ERQ
Sbjct: 296 VVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQ 355
Query: 309 RVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNI 368
+V +CL AAV RRAS G ++E+ DR GLL+D TR RE+GL++ R E+ +DEA+
Sbjct: 356 KVSRCLVAAVERRASHGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGT 415
Query: 369 FYVTDEMGNPADPKIIEAVRQKIG 392
FY+ + G + + AVR ++G
Sbjct: 416 FYLVTDAGGEVRAEALHAVRARVG 439
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 248/460 (53%), Gaps = 63/460 (13%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLT-- 117
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L H G S T
Sbjct: 61 LVIYKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTC 120
Query: 118 ----------------ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
ALE T DR GLLS + +VL D C V + WTHNGR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLY 180
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS------------MAVTHTE 209
V + + + + + +R + + N + A+ V+ HTE
Sbjct: 181 VTTTAAATTADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTE 240
Query: 210 RRLHQMMFADRDYERMPVLRHSTDYPV------------------------VTVQNWADR 245
RRLHQ+M DRDYE P PV V++ +W +R
Sbjct: 241 RRLHQLMHDDRDYESGP-----APTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEER 295
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
Y+VV + +DR +LLFD VC LTDM+YVVFHAT+ + G A E+YIRH DG + S
Sbjct: 296 GYAVVKMTSRDRPRLLFDTVCALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSA 355
Query: 306 ERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEA 365
ERQ+V +CL AAV RRA+ GVR+E+ DR GLL+D TR RE+GL++ R E+ +D+A
Sbjct: 356 ERQKVSRCLVAAVERRATHGVRVEVRAADRSGLLSDFTRVLREHGLSLLRVELKRHKDDA 415
Query: 366 LNIFYVTDEMGNPADPKIIEAVRQKIGLSNLK---VKELP 402
IFY+ + G + + AV+ ++ ++ VKE P
Sbjct: 416 FGIFYLVTDTGGEVRAEALRAVQARVAEMDISLDVVKEAP 455
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 260/488 (53%), Gaps = 78/488 (15%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+++ L+ R+ TP VV+DN TLVKVDS R G+LL+ VQ+LTDL+L+I K+YI SD
Sbjct: 12 DFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYICSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-----------------YGRSNS-F 113
G + MDVFHVTD G KLTD S+ +I+++L H G +
Sbjct: 72 GGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAGPDV 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+G ALE T DR GLLS + +VLAD C V + WTHNGR A ++YV +P
Sbjct: 132 SGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYV------TPPLP 185
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRLHQMMFADRDYERMPV- 227
S+ R+E + V+ ++ + ++ HTERRLHQ+M DRDYE P
Sbjct: 186 SRWA-RVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYESGPAP 244
Query: 228 --------------------LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
R + V+V +W +R Y VV + +DR LLFD VC
Sbjct: 245 TPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLFDTVCA 304
Query: 268 LTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
LTDM+YVVFHAT+ + G A E+YIRH DG + S ERQ+V +CL AAV RRA+ GVR
Sbjct: 305 LTDMQYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVSRCLVAAVERRATHGVR 364
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL+D TR RE+GL++ R E+ RDEA +FY+ + G + + AV
Sbjct: 365 VEVHAADRSGLLSDFTRVLREHGLSLLRVELKRHRDEAFGVFYLDTDTGGEVRTEALRAV 424
Query: 388 RQKI---GLSNLKVKE---------------LPMIYHQKGESEEQTVGVGGAVLLSLGSL 429
+ ++ G+S VKE P + Q+ + + + SLGSL
Sbjct: 425 QMRVAEMGISLDVVKETKAPGWPPVRKTSVPAPPVAGQQPQEKPRP---------SLGSL 475
Query: 430 VRRNLYNL 437
+ NL L
Sbjct: 476 LWSNLEKL 483
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 255/422 (60%), Gaps = 34/422 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YE L R+ RV +DN C T+VKV+S + +LLE ++VL DL L I K Y+SSD
Sbjct: 11 DYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYVSSD 70
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR-----SNSFNG-------LTAL 119
G + +DVFHV D G+K+ ++ ISYIEQ++ T R SN F T +
Sbjct: 71 GGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHYTEI 130
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+ G +R G+ SE+ AVLA+ C+V+EA W+H +A + +V D ++ SPI D ++
Sbjct: 131 EMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNRLAT 190
Query: 180 IEARLRNVLKG----DNDIRSAK---MTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
IE L VL+ D+D RSA+ + V +H ERRLHQ+MFA RD++ P + ST
Sbjct: 191 IEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPG-QVST 249
Query: 233 DYP-------------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHAT 279
+P VV++ ++ YSVVNV+C DR KL+FD VCTLTDM++ VFHA+
Sbjct: 250 AFPMLSLDGYKKDKSTVVSLDRCNEKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVFHAS 309
Query: 280 INTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQ-GL 338
+++ G A E+YIRH DG + + E+ V++ L+AAV RR EGV+LELC E + G
Sbjct: 310 VSSQGPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCEGVKLELCTEKKNVGF 369
Query: 339 LADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKV 398
L+ +TR RE+GL VTRA+++ + D N FYV D GN D +E+VR+++ +V
Sbjct: 370 LSHITRVLRESGLTVTRADIAMDGDVTKNTFYVKDISGNKIDMNAVESVRRELEPLPFQV 429
Query: 399 KE 400
K+
Sbjct: 430 KD 431
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 180/451 (39%), Positives = 253/451 (56%), Gaps = 67/451 (14%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS----TD 233
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
V V + +R Y+VV ++C+DR +LLFD + LTD+ YVVFH T
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT-------------- 300
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNV 353
G+ LE+ EDR GLL+++TR FREN L++
Sbjct: 301 -------------------------------GLELEVKTEDRAGLLSEITRVFRENSLSI 329
Query: 354 TRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEE 413
RA ++T+ EA + FYV+D GNP D K +EA+ +++G + L+VK + E
Sbjct: 330 IRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDSG 389
Query: 414 QTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
+G+L++ + LIRSYS
Sbjct: 390 GG-----GAAAIIGNLLKGSFQGFRLIRSYS 415
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
+++ + D E ++R + P V + N + S +V+ V + +L + V L D+
Sbjct: 7 ELVVVEEDDEYAKLVRR-MNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNL 65
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEA-----------AVGRRA 322
V+ A I++ G F + DG + ++ + +CLE+ A G
Sbjct: 66 VITKAYISSDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAP 125
Query: 323 SEGVR-LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
SE +EL DR GLL++V N+ AEV T A + +TDE
Sbjct: 126 SEETTCIELTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDE 178
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 243/483 (50%), Gaps = 96/483 (19%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMD---------VFHVTDLNGNKLTDESVISYIEQSLETIHY---- 107
L+I K+YISSDG + MD +FHVTD G KLTD S+ +I+++L
Sbjct: 61 LVISKSYISSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGN 120
Query: 108 GRSNSF---------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
G S F + ALE T DR GLLS + VLAD C V + WTH
Sbjct: 121 GPSPRFTTCLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTH 180
Query: 153 NGRIASLIYV----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-- 206
+GR A ++YV + + + + IE + V+ + + VSM+
Sbjct: 181 SGRAAGVLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE 240
Query: 207 ---HTERRLHQMMFADRDYERMPVLRHSTDYPV------------------------VTV 239
HTERRLHQ+M DRDYE P PV V++
Sbjct: 241 GRVHTERRLHQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSI 295
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
++W +R Y+VV + +DR KLLFD VC LTDM YVVFHAT+ + G A E+YIRH DG
Sbjct: 296 ESWEERGYAVVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGR 355
Query: 300 PISSEPERQRVIQCLEAAVGRRAS------------------------------EGVRLE 329
+ S ERQ+V +CL AAV RRAS +G ++E
Sbjct: 356 TVDSNAERQKVSRCLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVE 415
Query: 330 LCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
+ DR GLL+D TR RE+GL++ R E+ +DEA+ FY+ + G + + AVR
Sbjct: 416 VRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEALHAVRA 475
Query: 390 KIG 392
++G
Sbjct: 476 RVG 478
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 243/483 (50%), Gaps = 96/483 (19%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMD---------VFHVTDLNGNKLTDESVISYIEQSLETIHY---- 107
L+I K+YISSDG + MD +FHVTD G KLTD S+ +I+++L
Sbjct: 61 LVISKSYISSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGN 120
Query: 108 GRSNSF---------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
G S F + ALE T DR GLLS + VLAD C V + WTH
Sbjct: 121 GPSPRFTTCLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTH 180
Query: 153 NGRIASLIYV----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-- 206
+GR A ++YV + + + + IE + V+ + + VSM+
Sbjct: 181 SGRAAGVLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE 240
Query: 207 ---HTERRLHQMMFADRDYERMPVLRHSTDYPV------------------------VTV 239
HTERRLHQ+M DRDYE P PV V++
Sbjct: 241 GRVHTERRLHQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSI 295
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
++W +R Y+VV + +DR KLLFD VC LTDM YVVFHAT+ + G A E+YIRH DG
Sbjct: 296 ESWEERGYAVVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGR 355
Query: 300 PISSEPERQRVIQCLEAAVGRRAS------------------------------EGVRLE 329
+ S ERQ+V +CL AAV RRAS +G ++E
Sbjct: 356 TVDSNAERQKVSRCLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVE 415
Query: 330 LCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
+ DR GLL+D TR RE+GL++ R E+ +DEA+ FY+ + G + + AVR
Sbjct: 416 VRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAVGTFYLVTDAGGEVRAEALHAVRA 475
Query: 390 KIG 392
++G
Sbjct: 476 RVG 478
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 227/375 (60%), Gaps = 37/375 (9%)
Query: 53 VQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG---- 108
VQVL DL+L+I K YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G
Sbjct: 2 VQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITK 61
Query: 109 --RSNSFNGL---------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
+SN + TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A
Sbjct: 62 EMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAA 121
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMT---------VSMAVTHT 208
+IY++D +G PI D + +++ L V++ + + V + HT
Sbjct: 122 MVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHT 181
Query: 209 ERRLHQMMFADRDYERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDR 257
ERRLH++M+ + DYE + R + VT++ A YS+VNV+C+DR
Sbjct: 182 ERRLHELMYGEGDYENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDR 239
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAA 317
KLLFD VC L ++++VVFHA G A E++IR +G + +E +R+R+ CL AA
Sbjct: 240 PKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAA 299
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+ RRAS+G++LE+ E++ GLL+DVTR RENGL++TRAE+ T+ + A+ FYVTD G
Sbjct: 300 ISRRASQGLKLEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGG 359
Query: 378 PADPKIIEAVRQKIG 392
P +EAV +++G
Sbjct: 360 ETGPSEVEAVVRELG 374
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 236/411 (57%), Gaps = 59/411 (14%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E L+ R+ PRV IDN T+VK+DSA RHGILLE QVLTDL+L+I K+
Sbjct: 7 PHIHGEIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKS 66
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFN-GLT------- 117
YISSDG + MDVFHVTD +GNKLTD ++ YI+Q+L E+ + S + LT
Sbjct: 67 YISSDGGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPR 126
Query: 118 ----ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
A+ELT TD+ G+ SE+ AVL L +V A WTHN R+A +I+++D N PI +
Sbjct: 127 VVNLAIELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-N 185
Query: 174 SQQIDRIEARLRNVLKG-------DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++++ +++A+L+NV+K D+ +R + HTERRLHQMM+AD DYER+
Sbjct: 186 AERLAQVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLR 245
Query: 227 VLR--HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ V+V + + Y VVNV+ +DR KL FD VC LTDM+Y VFHA +++ G
Sbjct: 246 ACHGEKGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNG 305
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
A +G+++++ E+ GLL+ VTR
Sbjct: 306 S-----------------------------------MADQGLKVDIRAENTTGLLSKVTR 330
Query: 345 TFRENGLNVTRAEVSTERDE-ALNIFYVTDEMGNPADPKIIEAVRQKIGLS 394
RENGL++T+ ++ E DE A+ F+V + G +P I E VR++IG S
Sbjct: 331 VIRENGLSITKVQIGVEGDEMAVGSFHVANSSGQELNPNIAELVRRQIGGS 381
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 208/335 (62%), Gaps = 11/335 (3%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA E+TGTDR GL+SE+ AVLA+L C V A WTHN R+A +I ++D G PI D ++
Sbjct: 2 TAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPER 61
Query: 177 IDRIEARLRNVLKG---DNDIRSAKMTVSMAV-THTERRLHQMMFADRDYERM-PVLRHS 231
+ +E +L NV++ + R ++T +A THT+RRLHQ+MFAD+DYER S
Sbjct: 62 LVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGS 121
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
+D V+++N ++ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +++ G A E+
Sbjct: 122 SDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEY 181
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGL 351
+IR +DG + +E ER RV QCL AA+ RR + G+RL++ +++R GLL+D+TR FRENGL
Sbjct: 182 FIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGL 241
Query: 352 NVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE---LPMIYHQK 408
++ AE+ + A FYVTD G P +E +R++IG + + V + P +
Sbjct: 242 SIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASP 301
Query: 409 GESEEQTVGVGGAVLLSLGSL---VRRNLYNLGLI 440
V SLG+L + R N G I
Sbjct: 302 SRDRSTASSVENRPRFSLGTLWSQIERFSSNFGPI 336
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V I+N ++V V S R +L + V LTD+ ++ A +SS G + + +
Sbjct: 126 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 185
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
++G L ES + + Q L I +GL L++ +R+GLLS++ V + S
Sbjct: 186 MDGCTLGTESERNRVAQCL--IAAIERRVTHGLR-LDIRIKNRLGLLSDITRVFRENGLS 242
Query: 144 VVEAKVWTHNGRIASLIYVKD 164
+ A++ H R + YV D
Sbjct: 243 IRMAEIGIHGERASGSFYVTD 263
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 178/242 (73%), Gaps = 3/242 (1%)
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
+AS++Y+ D +G I+D ++ +I+ L VLKGD D +SA VS+ TH +RRLHQ+
Sbjct: 1 MASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQL 60
Query: 216 MFADRDYERMPVLRHST---DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
M+ADRDY+ ST + +VTV + D+ Y+VVN++C DR KLLFD VCTLTDM+
Sbjct: 61 MYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQ 120
Query: 273 YVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCM 332
YVV+H T+ G AY E+YIRH+DG+PISSE ERQRVI CLEAAV RR SEG++LELC
Sbjct: 121 YVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCG 180
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
EDR GLL+DVTR FRENGL+V RAEV+T +A+N+FYVTD GNP + IE VR++IG
Sbjct: 181 EDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIG 240
Query: 393 LS 394
L+
Sbjct: 241 LT 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +D+ + T+V + R +L + V LTD+ ++ + ++G +++ +
Sbjct: 85 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 144
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ ++ E+ + LE R + G+ LEL G DRVGLLS+V + + SV
Sbjct: 145 DGSPISSEAERQRVIHCLEAAV--RRRTSEGI-KLELCGEDRVGLLSDVTRIFRENGLSV 201
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIE 172
A+V T + ++ YV D SG+P++
Sbjct: 202 NRAEVTTRGSQAMNVFYVTDV-SGNPVK 228
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 174/247 (70%), Gaps = 19/247 (7%)
Query: 207 HTERRLHQMMFADRDYE-RMPVLRHSTDYP----VVTVQNWADRSYSVVNVQCKDRTKLL 261
HTERRLHQ+M+ADRDY+ P S+ YP +VTV+N +++ Y+ VN++C DR KLL
Sbjct: 1 HTERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRR 321
FD VCTLTDM+YVV+HAT+ G AY E++IRHIDG PISSE ERQR+I CLEAA+ RR
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRR 120
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
SEG+RLELC EDR GLL+DVTR FRENGL+VTRAEV+T +A+N+FYV D G P
Sbjct: 121 TSEGIRLELCSEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKS 180
Query: 382 KIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNL 437
+ IEAVR +IG + L VK Q S+ GG SLG+L + + LY+L
Sbjct: 181 ETIEAVRNEIGKTILHVK-------QDDYSKSPPQESGG---FSLGTLFKSRSEKFLYHL 230
Query: 438 GLIRSYS 444
GL++SYS
Sbjct: 231 GLVKSYS 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D+ P C D TP V ++N T V + A R +L +AV LTD+ +
Sbjct: 17 DVTNPNCND---SSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYV 73
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A + ++G + + ++G ++ E+ + LE R++ G+ LEL
Sbjct: 74 VYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS--EGIR-LELC 130
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
DR+GLLS+V + + SV A+V T + ++ YV D +SG P++
Sbjct: 131 SEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVID-SSGYPVK 179
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 174/247 (70%), Gaps = 19/247 (7%)
Query: 207 HTERRLHQMMFADRDYERMPV-LRHSTDYP----VVTVQNWADRSYSVVNVQCKDRTKLL 261
HTERRLHQMM+ADRDY+ + S+ YP +VTV+N +++ Y+ VN++C DR KLL
Sbjct: 1 HTERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRR 321
FD VCTLTDM+YVV+HAT+ G AY E++IRHIDG PISSE ERQR+I CLEAA+ RR
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRR 120
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
SEG+RLELC EDR GLL+DVTR FRENGL+VTRAEV+T +A+N+FYV D G P
Sbjct: 121 TSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKS 180
Query: 382 KIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR----RNLYNL 437
+ IEAVR +IG + L VK Q S+ GG SLG+L + + LY+L
Sbjct: 181 ETIEAVRNEIGKTILHVK-------QDDYSKSPPQESGG---FSLGTLFKSRSEKFLYHL 230
Query: 438 GLIRSYS 444
GL++SYS
Sbjct: 231 GLVKSYS 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V ++N T V + A R +L +AV LTD+ ++ A + ++G + +
Sbjct: 33 TPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQEYFI 92
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
++G ++ E+ + LE R++ G+ LEL DRVGLLS+V + +
Sbjct: 93 RHIDGCPISSEAERQRLIHCLEAAIKRRTS--EGIR-LELCSEDRVGLLSDVTRIFRENG 149
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D +SG P++
Sbjct: 150 LSVTRAEVTTRGSQAVNVFYVID-SSGYPVK 179
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 43/370 (11%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---GRSNSF---- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L H G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCL 120
Query: 114 -----------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV 162
+G ALE T DR GLLS + +VLAD C V + WTHNGR A ++YV
Sbjct: 121 GNVVGPGGPDVSGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYV 180
Query: 163 KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTV-----SMAVTHTERRLHQMMF 217
D G+ + + RIE + V+ ++ + V + HTERRLHQ+M
Sbjct: 181 TDTAGGAALLPG-RCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMH 239
Query: 218 ADRDYERMPV------------------LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
DRDYE P V++ +W +R Y+VV + +DR +
Sbjct: 240 DDRDYESGPAPTPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPR 299
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
LLFD VC LTDM+YVVFHAT+ + G A E+YIRH DG + + ERQ+V +CL AAV
Sbjct: 300 LLFDTVCALTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVSRCLVAAVE 359
Query: 320 RRASEGVRLE 329
RRA+ VRL+
Sbjct: 360 RRATH-VRLD 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 21/166 (12%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG---------- 284
P V V N ++V V +R +L ++V LTD++ V+ + I++ G
Sbjct: 23 PGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWLMDVFHVT 82
Query: 285 --------ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRA---SEGVRLELCME 333
+ + EF R + T R CL VG S LE +
Sbjct: 83 DQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDVSGCAALEFTVH 142
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA 379
DR GLL+ +T +NG +V + T A + YVTD G A
Sbjct: 143 DRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAA 188
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 197/322 (61%), Gaps = 11/322 (3%)
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+SE+ AVLA+L C V A WTHN R+A +I ++D G PI D +++ +E +L NV++
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 G---DNDIRSAKMTVSMAV-THTERRLHQMMFADRDYERM-PVLRHSTDYPVVTVQNWAD 244
+ R ++T +A THT+RRLHQ+MFAD+DYER S+D V+++N +
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGSSDRIQVSIENCKE 120
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
+ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +++ G A E++IR +DG + +E
Sbjct: 121 KGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTLGTE 180
Query: 305 PERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDE 364
ER RV QCL AA+ RR + G+RL++ +++R GLL+D+TR FRENGL++ AE+ +
Sbjct: 181 SERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGER 240
Query: 365 ALNIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKE---LPMIYHQKGESEEQTVGVGGA 421
A FYVTD G P +E +R++IG + + V + P + V
Sbjct: 241 ASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSVENR 300
Query: 422 VLLSLGSL---VRRNLYNLGLI 440
SLG+L + R N G I
Sbjct: 301 PRFSLGTLWSQIERFSSNFGPI 322
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V I+N ++V V S R +L + V LTD+ ++ A +SS G + + +
Sbjct: 112 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 171
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
++G L ES + + Q L I +GL L++ +R+GLLS++ V + S
Sbjct: 172 MDGCTLGTESERNRVAQCL--IAAIERRVTHGLR-LDIRIKNRLGLLSDITRVFRENGLS 228
Query: 144 VVEAKVWTHNGRIASLIYVKD 164
+ A++ H R + YV D
Sbjct: 229 IRMAEIGIHGERASGSFYVTD 249
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 158/238 (66%), Gaps = 22/238 (9%)
Query: 215 MMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
MMFADRDYER+ D+ P VTV NW+D+ YSVV + KDR KLLFD VCTLT
Sbjct: 1 MMFADRDYERV----DDDDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLT 56
Query: 270 DMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLE 329
DM+YVVFHA I+ G +AY E+YIRHIDG+P+ S+ ERQRVIQCLEAA+ RR SEG++LE
Sbjct: 57 DMQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLE 116
Query: 330 LCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
LC DR GLL++VTR FREN L VTRAEV+T+ D+A+N FYV+ G D K IE++RQ
Sbjct: 117 LCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQ 176
Query: 390 KIGLSNLKVKELP---MIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRSYS 444
IG + LKVK P HQ + L G R+ N GL++SYS
Sbjct: 177 AIGNTILKVKGTPDELKSTHQDSPTRS----------LFSGLFKSRSFVNFGLVKSYS 224
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + S R +L + V LTD+ ++ A I ++G +++
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 82 HIDGSPVKSDAERQRVIQCLEAAIERRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 138
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKM 199
+V A+V T + + YV + + DS+ I+ I + N + KG D
Sbjct: 139 TVTRAEVTTKGDKAVNTFYV--SGASGYLVDSKTIESIRQAIGNTILKVKGTPD------ 190
Query: 200 TVSMAVTHTE---RRLHQMMFADRDY 222
+ TH + R L +F R +
Sbjct: 191 --ELKSTHQDSPTRSLFSGLFKSRSF 214
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 183/303 (60%), Gaps = 27/303 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L R++ PRV IDN C T+VK+D A +HGILLE VQ LTDL+L+I K+YISSD
Sbjct: 31 EIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYISSD 90
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQ-------------SLETIHYGRSNSFNGLTA 118
G + MDVFHV D GNKLTD+S++++IEQ S ET+ + A
Sbjct: 91 GGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEANVA 150
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+E+ GTDR GL SE+ VL DL +++ AK WTHN ++ +IY +D + PI + +++
Sbjct: 151 IEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERERLA 210
Query: 179 RIEARLRNVL-----KGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVL---- 228
++ ++RNV+ KGD D+RS + S +HTERRLHQMM+A DYE
Sbjct: 211 QVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACHGDN 270
Query: 229 ----RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ D V+V + R Y VVNV+ +DR KLLFD+VC LTDM+Y VFHA + +
Sbjct: 271 DSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVTSNS 330
Query: 285 ERA 287
A
Sbjct: 331 PMA 333
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 212 LHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
++Q DR+ E + H P V + N + R+ +VV + ++ +L ++V LTD+
Sbjct: 22 VYQQPHIDREIESLKERIHP---PRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDL 78
Query: 272 EYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRASEGVR 327
+ ++ + I++ G F+++ G ++ + Q + +C + G +SE V+
Sbjct: 79 DLIISKSYISSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQ 138
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+E+ DR GL ++++ + G N+ A+ T D+ + I Y D
Sbjct: 139 HCCKGPQEANVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPED 196
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 150/208 (72%), Gaps = 8/208 (3%)
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDY-------PVVTVQNWADRSYSVVNVQCK 255
M TH +RRLHQM+FADRDYER V + D P + ++ ++ YS V+V+CK
Sbjct: 27 MGSTHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCK 86
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLE 315
DR KL+FD+VCTLTDM+YVVFHATI++ G A E++IRH+DG + +E E++RV +C+E
Sbjct: 87 DRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIE 146
Query: 316 AAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
AA+ RR SEGV LELC +DR GLL++VTR RE+GL V RA VST ++ LN+FYV D
Sbjct: 147 AAIQRRVSEGVSLELCAKDRVGLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRDAY 206
Query: 376 GNPADPKIIEAVRQKIGLSNL-KVKELP 402
GNP D KIIEA+R++IG + + VK +P
Sbjct: 207 GNPVDMKIIEALRKEIGQTVMVNVKRVP 234
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ I+ + V V R ++ + V LTD+ ++ A ISS+G + + +
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + +E R + G++ LEL DRVGLLSEV +L +
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEAAIQRRVS--EGVS-LELCAKDRVGLLSEVTRILREHGL 182
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T + ++ YV+D G+P++
Sbjct: 183 TVCRAGVSTVGEKGLNVFYVRDA-YGNPVD 211
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 181/296 (61%), Gaps = 22/296 (7%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI D +
Sbjct: 102 TAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIR 161
Query: 177 IDRIEARLRNVLK-----GDNDIRSAKMT----VSMAVTHTERRLHQMMFADRDYERM-- 225
+++ L V++ GD ++ V + HTERRLH++M+ + DYE
Sbjct: 162 KAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENCFD 221
Query: 226 ---------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
+ R + VT++ A YS+VNV+C+DR KLLFD VC L ++++VVF
Sbjct: 222 CDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVF 279
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQ 336
HA G A E++IR +G + +E +R+R+ CL AA+ RRAS+G++LE+ E++
Sbjct: 280 HAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENKM 339
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
GLL+DVTR RENGL++TRAE+ T+ + A+ FYVTD G P +EAV +++G
Sbjct: 340 GLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELG 395
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 191/342 (55%), Gaps = 43/342 (12%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C A++++VDSA +HGILLE VQVL DLNL+I KAYISS
Sbjct: 9 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL--------TALELT 122
DG +FMDVF+VTD +GNK+TDE ++ YI++SL + S+ + T++ELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 128
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G+DR GLLSEV AVL L+CSVV A+VWTHN R A++++V D +G I D +++ +++
Sbjct: 129 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 188
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVV 237
L NVLKG N R AK + V + + A+ D E +RH P
Sbjct: 189 LLCNVLKGSNKSREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSP-- 246
Query: 238 TVQNWADRSYSVVNVQC-------------------KDRTKLLFDVVCTLTDMEYVVFHA 278
V++ A+R +QC DR LL DV + V A
Sbjct: 247 -VKSDAERQRV---IQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRA 302
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGR 320
+ T +A F++R G P+ + + I + A+G+
Sbjct: 303 EVTTRAGKAVNTFHVRDASGYPVDA-----KTIDSIREAIGQ 339
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 176/322 (54%), Gaps = 43/322 (13%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
+ + + ++ G+L EV VL DL + +A + + G + V D G+ I D +
Sbjct: 34 SVIRVDSANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTD-QDGNKITDEEI 92
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAV-THTERRLHQMMFADRD---YERMPVLRHST 232
+D I+ L G + + M S+ V T+ ++ +DR E VL H
Sbjct: 93 LDYIQKSL-----GSDACFISSMRRSVGVIPSTDHTSIELTGSDRPGLLSEVSAVLTH-L 146
Query: 233 DYPVVTVQNWAD--RSYSVVNV------------------------------QCKDRTKL 260
VV + W R+ +V++V + ++ L
Sbjct: 147 KCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQLLCNVLKGSNKSREAKTL 206
Query: 261 LFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGR 320
LFD VCTLTDM+YVVFHA ++ G AY E+YIRHIDG+P+ S+ ERQRVIQCLEAA+ R
Sbjct: 207 LFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIER 266
Query: 321 RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD 380
R SEG++LELC DR GLL+DVTR FREN L+VTRAEV+T +A+N F+V D G P D
Sbjct: 267 RVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNTFHVRDASGYPVD 326
Query: 381 PKIIEAVRQKIGLSNLKVKELP 402
K I+++R+ IG + L+VK P
Sbjct: 327 AKTIDSIREAIGQTILQVKGSP 348
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 219 DRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
D +YE+ L + P V + N ++ SV+ V ++ +L +VV L D+ ++ A
Sbjct: 8 DDEYEK---LIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKA 64
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGR--------RASEGV---- 326
I++ G F + DG I+ E ++ ++ ++G R S GV
Sbjct: 65 YISSDGGWFMDVFNVTDQDGNKITDE----EILDYIQKSLGSDACFISSMRRSVGVIPST 120
Query: 327 ---RLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA--DP 381
+EL DR GLL++V+ +V AEV T A + +VTDE A DP
Sbjct: 121 DHTSIELTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDP 180
Query: 382 KIIEAVRQ 389
+ + V+Q
Sbjct: 181 ERLSKVKQ 188
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 208/389 (53%), Gaps = 19/389 (4%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YE L +R+N ++ IDN T +++DSA G L+E VQ + LNL I++A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETI--------HYGRSNSFNGLTAL 119
+F DVF VT++NG K+ + + ++++ L E I H G S T +
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEEGIFSNAGAMGHEGASGPTES-TVV 119
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G D+ G L++V +L + C+V A VWT+ GR+A ++ V + G PI D ++
Sbjct: 120 ELAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLE--KGKPIADQVKLQG 177
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD--RDYERMPVLRHSTDYPVV 237
+ + +++ + + S V H +R LHQMM A+ R +++ + P +
Sbjct: 178 LRQIMLDIMGPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHSTHAARLKPNI 237
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHI 296
++ Y ++++ CKDR KLLFD VCTL DMEY V+H TIN+ + A E+Y +
Sbjct: 238 SIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINSHPDGSATQEYYAKPR 297
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
G P + +++ LEA++ RR +G++L + D G LA +T R+ GL + RA
Sbjct: 298 WGRPWDARAA-EKLAAMLEASIQRRFPKGLKLHVHSVDSFGSLATLTGVLRDAGLTINRA 356
Query: 357 EVSTERDEALNIFYVTDEMGNPADPKIIE 385
+ ++ + + FYV D G + +E
Sbjct: 357 KTNSANNVCGHTFYVMDASGAAPERAAVE 385
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 179/338 (52%), Gaps = 41/338 (12%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVV+DN C AT+++VDS HG LL VQV+ DL L+I+KAY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D+ ISYI+ +LE +Y + G+ T +ELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK-DCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVLA ++C+V A++WTHN R+A++++V D SG IED +I I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 182 ARLRNVLKGDN----DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
RL N+L+G + D + + H A ++Y +RH P
Sbjct: 196 TRLGNLLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEY----YIRHVDGDP-- 249
Query: 238 TVQNWADRSYSV----------------VNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
V++ A+R V + V+ DR LL DV + + A I+
Sbjct: 250 -VRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEIS 308
Query: 282 TAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
+ A FY+ G P+ + + I + A +G
Sbjct: 309 SERGEAVDTFYLSDPQGHPVEA-----KTIDAIRAQIG 341
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Query: 255 KDRTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISSEPERQRVIQC 313
+ ++ LLFD VCT+TDM YV+ H +++ AY E+YIRH+DG P+ SE ERQRV+QC
Sbjct: 203 RGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQC 262
Query: 314 LEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
LEAA+ RR ++G+ LE+ DR GLL+DVTR FRENGL + RAE+S+ER EA++ FY++D
Sbjct: 263 LEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSD 322
Query: 374 EMGNPADPKIIEAVRQKIGLSNLKVKELPM--IYHQKGESEEQTVGVGGAVLLSLGSLVR 431
G+P + K I+A+R +IG + L+VK P G T V G+ G+L +
Sbjct: 323 PQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGATDDVAGSTAFLFGNLFK 382
Query: 432 --RNLYNLGLIRSYS 444
R N LI+ YS
Sbjct: 383 FYRPFQNFSLIKLYS 397
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 212/469 (45%), Gaps = 75/469 (15%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
L EYE L +R++ P VV+DN TL+ +DSA R G L+E VQ+LT+L L + KA
Sbjct: 118 GALLEYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKAR 177
Query: 68 ISSDGRFFMDVFHVTDLNGNKLT-DESVISYIEQSLETIHYGRSNSFNGLTALELTGTDR 126
ISSDG +F+D FHVTD L+ D S E + S T EL G DR
Sbjct: 178 ISSDGGWFVDEFHVTDAGKKVLSVDTDPGSDAEADVGVFEEASQCS----TVFELAGNDR 233
Query: 127 VGLLSEVFAVLADLQC--------SVVEAKVWTHNGRIASLIYVKD-------------- 164
+GLL+EV A+L + C V A VWTHN R+A +I V +
Sbjct: 234 IGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGAVAAPA 293
Query: 165 -----CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT----HTERRLHQM 215
PI+D ++ ARLR +L G D V++A T H ERRLHQ+
Sbjct: 294 PGGGVGGGSCPIKDGIKL----ARLRQLLLGMMDPSGQDSVVNVATTKGLIHYERRLHQL 349
Query: 216 MFADRDYE---------RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVC 266
+ + + + P V++Q+ +Y +++++C+DR KLLFD VC
Sbjct: 350 LLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLFDTVC 409
Query: 267 TLTDMEYVVFHATINTAGER----------AYLEFYIRHIDGTPISSEPERQRVIQCLEA 316
TL D+ Y V+H ++ ER A FY+R G + ++ LE
Sbjct: 410 TLADLNYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKYMLEV 469
Query: 317 AVGRRASEGVRLELC---------------MEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
A+ RR G ++ + L +T +R+ GL ++RA+V
Sbjct: 470 AIQRRQPTGTKVHISGVPASAAAAASGAGGGGGATSDLPALTAVWRDFGLCISRAKVRAL 529
Query: 362 RDEAL-NIFYVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKG 409
A + FY+ D G P +++A Q+IG L + M+ G
Sbjct: 530 AGAAGEHTFYLVDRNGLPPADTVVQAACQQIGGVRLARPDAGMMGSSAG 578
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 135/242 (55%), Gaps = 33/242 (13%)
Query: 78 VFHVTDLNGNKLTDESVISYIEQSLETIHYGR-----SNSFNG-------LTALELTGTD 125
VFHV D GNK+ + I+YIEQ++ T GR SN T +E+ G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R G+ SE+ AVLA+ C+V+EA W+H +A + +V D ++ + I D ++ I+ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVLKG----DNDIRSAK---MTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP--- 235
VL D D R A+ + V +H ERRLHQ+MFA +D++ P + S +P
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPG-QVSAAFPMLS 196
Query: 236 ----------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VV+V ++ YSV++V+C DR KL+FD VCTLTDM++ VFHA++++ G
Sbjct: 197 LDGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGP 256
Query: 286 RA 287
A
Sbjct: 257 FA 258
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 131/227 (57%), Gaps = 14/227 (6%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
L EYE L +R++ P V IDN TL+ +DSA R G L+E VQ+LT+L L + KA IS
Sbjct: 43 LLEYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARIS 102
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL-----------TA 118
SDG +F+D F VTD G K+T+E + I + L S++ +G+ T
Sbjct: 103 SDGGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTL 161
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
EL G DR+GLL++V +L C V A VWTHN R A +I V DC++G PI+D+ ++
Sbjct: 162 FELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLA 221
Query: 179 RIEARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYE 223
R+ L N++ D+ + + VS + H ERRLHQ++ + + +
Sbjct: 222 RLRQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI------NTAGER-- 286
P V VQ+ R Y +VN++C+DR KLLFD VCTL D+ Y V+H + + AG +
Sbjct: 505 PEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKVS 564
Query: 287 -AYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGL------- 338
A FY+R G + ++ LE A+ RR +G ++ + G
Sbjct: 565 IAVQTFYMRPRYGDAYWDPRKAAKLKYMLECAIQRRQPQGTKVHIQGAPSSGSGGSGGAP 624
Query: 339 ---LADVTRTFRENGLNVTRAEVSTERDEAL-NIFYVTDEMGNPADPKIIEAVRQKIG 392
L +T +R+ GL +TRA+V A + FY+ D G P +++ Q+IG
Sbjct: 625 AADLPALTAVWRKFGLCITRAKVRALAGSAGEHTFYLVDNFGRPPAEAVVQQACQQIG 682
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 221 DYERMPVLRHSTDYPVVTVQN--WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
+YE + + H P V + N +ADR+ ++ + +R L +VV LT++ V A
Sbjct: 45 EYETLELRVHP---PNVNIDNETYADRT--LITLDSANRPGTLVEVVQLLTELGLCVIKA 99
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQ--RVIQCLEAAVGRRASEGVR--------- 327
I++ G EF + G +++E + + R + ++A G GV
Sbjct: 100 RISSDGGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQC 158
Query: 328 ---LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKI 383
EL DR GLLADV + NG V A V T + V D G P
Sbjct: 159 STLFELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLP----- 213
Query: 384 IEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
++ I L+ L+ L M+ H G+ E V V
Sbjct: 214 ---IKDNIKLARLRQLLLNMM-HTPGDVAESVVNV 244
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 77/92 (83%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVF+VTD +GNK+TDE V+ YI++SL
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSL 100
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE++K V+RMN PRV +DN TL+KVDSA + G LLE VQVL D+NL +++AYISS
Sbjct: 12 DEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVFHVTD NGNKL+++ V I+QSL
Sbjct: 72 DGEWFMDVFHVTDQNGNKLSEDDVAERIQQSL 103
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
Q + D ++++ VLR + P VTV N + R+ +++ V ++ L +VV L DM
Sbjct: 6 QSLKVDDEFQKF-VLR--MNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNL 62
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCL 314
V A I++ GE F++ +G +S + +R+ Q L
Sbjct: 63 HVRRAYISSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSL 103
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE++K V+RMN PRV +DN TL+KVDSA + G LLE VQVL D+NL I++AYISS
Sbjct: 12 DEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVFHVTD +GNKL+++ V I+QSL
Sbjct: 72 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSL 103
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 109/194 (56%), Gaps = 45/194 (23%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK--------VDSARRHGILLEAVQVLTDLNL 61
+DE+EKLVIRMN PRV +DN TATLVK VDSA ++G LLE VQVLT+L L
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKL 70
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG------ 115
IK+AYISSDG +FMD + NKL D VI IE SL S SF
Sbjct: 71 TIKRAYISSDGEWFMDGW-------NKLYDGLVIDRIELSLG----AGSLSFRAPPERSV 119
Query: 116 ---------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
TA+EL G DR GLLSEVFAVL DL+C++V ++ + Y++ +
Sbjct: 120 ELEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEEY----------YIRHLD 169
Query: 167 SGSPIEDSQQIDRI 180
SP+ + DR+
Sbjct: 170 D-SPVTSGDERDRL 182
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 10/126 (7%)
Query: 255 KDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCL 314
KDR LL +V LTD++ + + E+YIRH+D +P++S ER R+ +CL
Sbjct: 137 KDRPGLLSEVFAVLTDLKCNIVSSE----------EYYIRHLDDSPVTSGDERDRLGRCL 186
Query: 315 EAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
EAA+ RR +EG+RLEL EDR GLL+DVTR FRE+GL+VT AEV+T A N+FYV
Sbjct: 187 EAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAA 246
Query: 375 MGNPAD 380
G P +
Sbjct: 247 SGEPVE 252
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R G+L E VLTDL I +SS+ +++ L+ + +T + + LE
Sbjct: 139 RPGLLSEVFAVLTDLKCNI----VSSEE------YYIRHLDDSPVTSGDERDRLGRCLEA 188
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
R+ GL LEL DRVGLLS+V + + SV A+V T R A++ YV
Sbjct: 189 AIQRRNT--EGLR-LELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVV- 244
Query: 165 CNSGSPIE 172
SG P+E
Sbjct: 245 AASGEPVE 252
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 16/152 (10%)
Query: 154 GRIASLIYVKDCNSGSPI----------EDSQQIDRIEARLRNVLKGDNDI--RSAKMTV 201
G+I ++ + +G P+ D++++ RIEA L ++L GD+ SA TV
Sbjct: 68 GKITIGLFGDEVPAGPPLGCLVFLRNEEADTERMARIEAHLGHLLHGDSSSVGGSAVATV 127
Query: 202 SMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
A V H ERRLHQ+M DRD E ++ P V+VQ+ +R YSVV VQC+ R KL
Sbjct: 128 PAASVAHAERRLHQLMSPDRDQEERAT---TSPRPAVSVQSCVERGYSVVTVQCRYRPKL 184
Query: 261 LFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
L DVVCTLTDM+YVVFH+TI+T G++A+ E +
Sbjct: 185 LLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 216
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN 192
+FAVL+DL C VV+AK+WTHNGR+A +IY++D +SG+PI DSQ+I +IE L+NVL DN
Sbjct: 1 MFAVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDN 60
Query: 193 DIRS-AKMTVSM-AVTHTERRLHQMMFADRDYER 224
D+ S AK VSM ++ H E RLHQ+MF RDYER
Sbjct: 61 DVNSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+DG + ++ E++RVIQ +EAA+ RR SEGV LELC +DR GLL++VTR RENGL V R
Sbjct: 1 MDGCTLDTQGEKERVIQRIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCR 60
Query: 356 AEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNL-KVKELP 402
A VST ++ALN+FYV D GNP D K +EA+R++IG + + VK +P
Sbjct: 61 AGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVP 108
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
D G K E VI IE ++ R G++ LEL DRVGLLSEV +L +
Sbjct: 7 DTQGEK---ERVIQRIEAAI------RRRVSEGVS-LELCAKDRVGLLSEVTRILRENGL 56
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T + ++ YV+D SG+P++
Sbjct: 57 TVCRAGVSTRGEQALNVFYVRDA-SGNPVD 85
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 116 bits (291), Expect = 2e-23, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 82/129 (63%), Gaps = 13/129 (10%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD-VFHVTD 83
V IDN C TL+KVDS + GILLE VQ+L DL+L+I KAY+SSDG +FMD VFH TD
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 84 LNGNKLTDESVISYIEQSLETIHY---------GRS---NSFNGLTALELTGTDRVGLLS 131
GNK+TD I YIE+ L + G+ +S TA+ELTG DR GLLS
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVFAVLADL 140
E+ AVLA L
Sbjct: 121 EISAVLAGL 129
>gi|297600649|ref|NP_001049552.2| Os03g0247900 [Oryza sativa Japonica Group]
gi|255674366|dbj|BAF11466.2| Os03g0247900 [Oryza sativa Japonica Group]
Length = 177
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 85/123 (69%), Gaps = 5/123 (4%)
Query: 324 EGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKI 383
+GVRLEL + DR+GLLA VTR FRENGL+VT AE++T D A+N+F+VTD G PADPK
Sbjct: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
Query: 384 IEAVRQKIGLSNLKVKE--LPMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIR 441
I+ V Q+IG +L+V E P + + GG L SLGSLV++NL++LGLIR
Sbjct: 118 IDEVIQRIGTESLRVDEERWPRLC---SAEGDAAGRGGGGGLFSLGSLVKKNLFSLGLIR 174
Query: 442 SYS 444
S S
Sbjct: 175 SCS 177
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 112/192 (58%), Gaps = 4/192 (2%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
L EYE L +R++ P VVIDN T++ +DSA R G L+E VQ LT+L L I+ A IS
Sbjct: 43 LLEYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARIS 102
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQ--SLETIHYGRSNSFNGLTALELTGTDRV 127
SDG +F+D F VT+ K+ D+ I+ I + S+ET + T EL G DR
Sbjct: 103 SDGGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDKELCTVFELAGRDRH 162
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
GLL+ V +L C V+ A VWT + R+A +I + G+P+ D ++DR+E L ++
Sbjct: 163 GLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATE--RGAPVVDPPKLDRLEQILYDM 220
Query: 188 LKGDNDIRSAKM 199
L G + + +++M
Sbjct: 221 LGGGDAVVNSEM 232
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V +Q+ +Y +V ++C+DR KL FD VCTL DM Y ++HATI++ G+ A FY+R
Sbjct: 551 VRIQHSTLLNYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPR 610
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
G + E ++ LE+AV RR G ++ + DR L+A + G +TRA
Sbjct: 611 YGECVWDERRAAKLRYMLESAVQRRFPRGTKVCVQSGDRSSLVA-LFSALSSGGFWITRA 669
Query: 357 EVSTE-RDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
+V D A+ F +TD G + ++ + + +G
Sbjct: 670 DVRAHGHDNAVFEFTITDTRGQLPEQTHVQRICEAVG 706
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 79/117 (67%), Gaps = 6/117 (5%)
Query: 179 RIEARLRNVLKGDNDI--RSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L GD+ SA TV A V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YVVFH+TI+T G++A+ E +
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 80/117 (68%), Gaps = 12/117 (10%)
Query: 327 RLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEA 386
RLELC +DR GLL+DVTR FRENGL+VTRA+VST+ D+A+N+FYVTD GNP D +I+EA
Sbjct: 1 RLELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEA 60
Query: 387 VRQKIGLSNLKVKEL-PMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNLGLIRS 442
R++IG S L+VK+L P + + E V S G+ LY+LGLI S
Sbjct: 61 TRKEIGQSILQVKDLTPSSPNSQHE-------VASKSRFSFGTF----LYSLGLINS 106
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL DRVGLLS+V + + SV A V T + ++ YV D SG+P++
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDA-SGNPVD 54
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 25/199 (12%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQR 309
+ +Q ++ +L D+V L D + ++ A I++ G F++ DG ++ E
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 310 VIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIF 369
+ Q G RLELC D+ G L+D TR FRENGL+VTRA++++ ++ +++F
Sbjct: 61 IQQ------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGVDVF 108
Query: 370 YVTDEMGNPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSL 429
YVTD GN D K +EA+RQ+IG L+VKE M H +E + S G L
Sbjct: 109 YVTDVAGNFVDSKTVEAIRQEIGKRALQVKESSM--HVDSSPQESSA-------FSFGDL 159
Query: 430 VR----RNLYNLGLIRSYS 444
+ R LYN+G +S S
Sbjct: 160 FKSQSERFLYNIGFKKSDS 178
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 15/128 (11%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
+++ SA +HGILL+ VQVL D +LLI KAYISSDG + MDVFHVTD +GNK+TDE +I +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 98 IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
I+Q T LEL TD++G LS+ + + SV A + + + +
Sbjct: 61 IQQG---------------TRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGV 105
Query: 158 SLIYVKDC 165
+ YV D
Sbjct: 106 DVFYVTDV 113
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELTGTDRVGLLSEV 133
FMDVFHVTD G KLT++SVI+YIEQSL + R + GLTALELTG R GL+SEV
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGMWNGPTRPMALEGLTALELTGAGRTGLISEV 85
Query: 134 FAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
FAVLAD+ C VVE + W H + LI++++ + D++++ RIEA
Sbjct: 86 FAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIEA 129
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
L EYE L +R++ P VVIDN T++ +DSA R G L+E VQ LT+L L I+ A
Sbjct: 41 GALLEYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCAR 100
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGT 124
ISSDG +F+D F VT+ KL D I+ I + L ++ S S+ T EL G
Sbjct: 101 ISSDGGWFVDEFFVTETPKGKLLDPRKINIIRKVL-SVESDSSASYKDKDICTVFELAGR 159
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+ V +L C V+ A VWT + R+A +I + G+P+ D ++DR+E L
Sbjct: 160 DRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATE--RGAPVVDPVKLDRLEQIL 217
Query: 185 RNVL-KGDNDIRS 196
++L GD + S
Sbjct: 218 YDMLGSGDAVVNS 230
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V +Q+ A +Y +V +QC+DR KL FD VCTL DM Y ++HATI++ G+ A FY+R
Sbjct: 610 VRIQHSALLNYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPR 669
Query: 297 DGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
G I E ++ LE+AV RR G ++ + DR L+ ++ G +TR
Sbjct: 670 YGECIWDERRAAKLRYMLESAVQRRFPRGTKVCVQSSDRSALV-NLFSALSSAGFWITR 727
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 16 LVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF 75
L +R++ P + IDN T V +DSA R G L+ VQ T+L+L I A ISSDG +F
Sbjct: 460 LELRVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWF 519
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLE---------TIHYGRSNSFNGL--TALELTGT 124
+DVFH+++ NG K+ + + I+Q L ++ ++ N + T EL G
Sbjct: 520 VDVFHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGP 579
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+EV +L C+V A VWT+ GR+A ++ + + G P+ D ++ R+ +
Sbjct: 580 DRPGLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLV 637
Query: 185 RNVL---KGDNDIRSAKMTVSMAVT------------------HTERRLHQMMF 217
++ G +D A + H +RRLHQ+M
Sbjct: 638 LGIMTRRPGPSDSNGALAAMGGGGLGPGSAGVIVNIRKVRGEIHHDRRLHQLML 691
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 305 PERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST--ER 362
P+ + + LE+++ RR +G+++ + DR G LA +TR + GL+VTRA+V T
Sbjct: 819 PQAELLRAMLESSIQRRFPKGLKVHVHSLDRFGCLAALTRVLHQTGLSVTRAKVRTYATS 878
Query: 363 DEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
+ + FYV D G P D +EA ++IG
Sbjct: 879 KSSGHTFYVMDARGGPPDKARVEAACREIG 908
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P + + N A ++ V + +R L +V T+++ + A I++ G F++
Sbjct: 467 PTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDVFHLS 526
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRAS--------------EGVRLELCMEDRQGLLA 340
+G + + + Q + Q L + + E EL DR GLLA
Sbjct: 527 EPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRPGLLA 586
Query: 341 DVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
+VT NG NV A V T R + +T E G P
Sbjct: 587 EVTHLLTHNGCNVRSAAVWTYRGRVAFVLSIT-EKGLP 623
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 6/117 (5%)
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSM---AVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L+GD+ S ++ +V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLRGDSSSVSGSAVATVPATSVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YVVFH+TI+T G++A+ E +
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 31/121 (25%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQ---------------------------SLETIHY 107
FMDVFHVTD G KLT++SVI+YIEQ SL+++
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQSLGM 258
Query: 108 G----RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
R + GLTALELTG DR GL+SEVF VLAD+ C VVE + WTH + LI+++
Sbjct: 259 WNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFLR 318
Query: 164 D 164
D
Sbjct: 319 D 319
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 95.5 bits (236), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
MDVFHVTD G KLTD SVI+YI+QSL T + + GLTALELTG R GLLSEVF
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAAAPPEGLTALELTGPGRAGLLSEVF 60
Query: 135 AVLADLQCSVVEAKVW 150
AVLAD+QC V +A+ W
Sbjct: 61 AVLADMQCGVADARAW 76
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
Y+ + + DR LL +V LTD+ V +A I T RA ++ ++P
Sbjct: 77 YTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPI 136
Query: 307 RQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
R I+ L V LEL EDR GLL+D+TRTFREN L + RAE+ST +A
Sbjct: 137 RLSTIKELLCNV---------LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAK 187
Query: 367 NIFYVTDEMGNPADPKIIEAVRQK 390
+ FYVTD GNP + KI+E++RQ+
Sbjct: 188 DTFYVTDVTGNPVESKIVESIRQQ 211
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 38/150 (25%)
Query: 78 VFHVTDLNGNKLTDESVISYIEQSLETIHYG---------------------RSNSFNGL 116
VF V D +GNK+ D V+ YI++ H+ R S G
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 117 -----------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL 159
T++EL GTDR GLLSEV AVL DL C+VV A++WTHN R A++
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 160 IYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
I+V D ++ S I D ++ I+ L NVL+
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVLE 150
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 30 AVCPT--ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN 87
V PT T +++ R G+L E VLTDL+ + A I + V HVTD + +
Sbjct: 70 GVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTH 129
Query: 88 K-LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+TD +S I++ L LEL+ DRVGLLS++ + ++V
Sbjct: 130 SAITDPIRLSTIKELL-------------CNVLELSAEDRVGLLSDITRTFRENSLTIVR 176
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIE 172
A++ T G+ YV D +G+P+E
Sbjct: 177 AEISTREGKAKDTFYVTDV-TGNPVE 201
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIG 392
EDR GLL+D+TR FREN L + RAE+STE +A + FYVTD G+P DPKII+++R++IG
Sbjct: 2 EDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQIG 61
Query: 393 LSNLKVKELPMIYHQKGESEEQTVGVGGAVLLSLGSLVR-RNLYNLGLIRSYS 444
+ L+VK H S + G L LGS + R+ N LIRSYS
Sbjct: 62 DTVLQVK------HNSSLSPKPPQGTKIGFL--LGSFFKARSFQNFKLIRSYS 106
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Query: 179 RIEARLRNVLKGDNDI--RSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L GD+ SA TV A V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YV
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYV 98
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSE+FAVLAD +C+VV ++VWTHN R+AS++Y+ D +G PI+D ++ IE
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 RLRNVLKGDNDIRSAKMTVSMA 204
L +VL GD D RSA VS+
Sbjct: 61 LLLSVLMGDRDKRSANTAVSVG 82
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSE+FAVL D +C+VV ++VWTHN R+AS++Y+ D +G PI+D ++ IE
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 RLRNVLKGDNDIRSAKMTVSMA 204
L +VL GD D RSA VS+
Sbjct: 61 LLLSVLMGDRDKRSANTAVSVG 82
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG-RSNSFNGLTALELTGTDRVGLLSEV 133
FMDVFHVTD G KLT++SVI+YIEQSL + R + GLTALELTG R GL+SEV
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLGMWNGPTRPMALEGLTALELTGAGRTGLISEV 146
Query: 134 FAVLADLQC 142
FAVLAD+ C
Sbjct: 147 FAVLADMDC 155
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 327 RLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEA 386
+LELC D+ GLL++VTR FREN L VTRAEVST A+N FYV D G D K I++
Sbjct: 1 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDS 60
Query: 387 VRQKIGLSNLKVKELP 402
+RQ IG N++VK P
Sbjct: 61 IRQAIG-QNIQVKGQP 75
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGLTALEL 121
I SDGR+F+ + + ++ S + + + G R + GLTALEL
Sbjct: 58 IWSDGRWFIRSW-TSSMSPTASVASSPTTASSPTSSRLSLGMWNGPTRPMALEGLTALEL 116
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG R GL+SEVFAVLAD+ C VVE + W H + LI++++ + D++++ RIE
Sbjct: 117 TGAGRTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNEET-----DTERMARIE 171
Query: 182 A 182
A
Sbjct: 172 A 172
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTK-LLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
V + N + +VV V ++ +L D++ LTDM + + + I++ E++IRH
Sbjct: 30 VCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSD------EYFIRH 83
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
I+G +++ E++++I+ +EAA+ RR E V+LEL ++ G L+D++R REN L + R
Sbjct: 84 INGYALNTTSEKEQLIKFIEAAIERRVCESVKLELSADNSVGFLSDISRVLRENSLVIVR 143
Query: 356 AEVS 359
A ++
Sbjct: 144 AFIN 147
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHG-ILLEAVQVLTDLNLLIKKAYISSDG 72
E++ + +V IDN T+VKVDS +HG +LL+ + VLTD+N I K+YISSD
Sbjct: 19 ERIYMVHRNCQVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSDE 78
Query: 73 RFFMDVFHVTDLNGNKLT----DESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
F + +NG L E +I +IE ++E LEL+ + VG
Sbjct: 79 YF------IRHINGYALNTTSEKEQLIKFIEAAIE-------RRVCESVKLELSADNSVG 125
Query: 129 LLSEVFAVLADLQCSVVEAKV 149
LS++ VL + +V A +
Sbjct: 126 FLSDISRVLRENSLVIVRAFI 146
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQ 175
T + + TD GL S++ +A +VV+AK+ T +G +V+D N G DS
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTN-GEAFNDST 785
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
++DR+ L V+ G IR ++ ERR + + R V + P
Sbjct: 786 KLDRLRDTLEKVISGQ--IRPSQ--------EIERRQTK-----DNKHRTAVFKVE---P 827
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
V + N A R+++V+ + +DR LL+D+ L D+ + A I+T GERA FY++
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD 887
Query: 296 IDGTPISSEPERQRVIQCLEAAV 318
+ G I S + +V + L A+
Sbjct: 888 VFGLKIDSRTKFVQVKETLTQAI 910
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T T++++ + R G+L + + L DL++ I A IS+ G +DVF+V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ + ++++L
Sbjct: 887 DVFGLKIDSRTKFVQVKETL 906
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPK 382
+E+ DR GLL D+TR R+ + + A +ST + A+++FYV D G D +
Sbjct: 842 IEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKDVFGLKIDSR 896
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S++ +A ++++AK+ T + A I+ G IE ++I R+ +
Sbjct: 735 DHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAIEKEERIARLAKTV 794
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRHSTDYPVVTVQNWA 243
R+VL GD + A R R+P RH T P V V N A
Sbjct: 795 RDVLTGDLPLEKA--------------------LRRQPPRLPERTRHLTVPPRVIVDNQA 834
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
++++V+ + +DR L+ V LTD+ + A ++T GER FY++ + G I
Sbjct: 835 SKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKIVH 894
Query: 304 EPERQRVIQCLEAA----VGRRASEG 325
+ ++ + LEAA V R+ EG
Sbjct: 895 RAKLAQIREALEAAITQTVPRKVEEG 920
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T T+++++ R G L + LTD+ + I A +S+ G +D F+V
Sbjct: 826 PRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSLE 103
D+ G K+ + ++ I ++LE
Sbjct: 886 DVFGMKIVHRAKLAQIREALE 906
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD GL S++ +A +VV+AK+ T +G +++D N G D ++D++
Sbjct: 738 TDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTN-GEAFNDKSKLDKLRK 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
L V+ G ++ S + ERR D + R V + P V + N
Sbjct: 797 TLEQVISG-------RLRPSQEI---ERR----QIKDNKH-RTAVFKVE---PNVIIDNK 838
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
A R+++V+ + +DR LL+DV TL D+ + A I+T GERA FY++ + G I
Sbjct: 839 ASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKID 898
Query: 303 SEPERQRVIQCLE 315
S R + +Q E
Sbjct: 899 S---RTKFLQVKE 908
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T T++++ + R G+L + + L DL+L I A IS+ G +DVF+V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ + ++++L
Sbjct: 891 DVFGLKIDSRTKFLQVKETL 910
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPK 382
+E+ DRQGLL DVTRT R+ L + A +ST + A+++FYV D G D +
Sbjct: 846 IEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKIDSR 900
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 32/137 (23%)
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR---------- 109
N++ K +DG +D F + D NG D+S + + ++LE + GR
Sbjct: 757 NVVDAKILTLADG-MALDTFFIQDTNGEAFNDKSKLDKLRKTLEQVISGRLRPSQEIERR 815
Query: 110 ---------------------SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
+ + T +E+T DR GLL +V L DL + A+
Sbjct: 816 QIKDNKHRTAVFKVEPNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASAR 875
Query: 149 VWTHNGRIASLIYVKDC 165
+ T R + YVKD
Sbjct: 876 ISTFGERAVDVFYVKDV 892
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 37/309 (11%)
Query: 26 VIDNAVCPTATLVKVDSARRHGI--LLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
V++ ++ T V+V+ A+ L+E TD+ + Y G +++ H T
Sbjct: 682 VLEGSLATTERDVRVERAKAATAQWLMEDGMNETDVQHFMGLGY----GSYWLSFDHDTH 737
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L ES + ++ET + G+T + + D GL S++ +A S
Sbjct: 738 ARHARLISESERMHSPLTVET----QPLPARGVTEVTIYAADHPGLFSKIAGAVAIAGAS 793
Query: 144 VVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G ++ ++
Sbjct: 794 IVDARIHTMTNGMALDTLWIQDAG-GAAFEEPQQLARLSLLVEQALTG-------RININ 845
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
+ RRL RM + P V + N A + +VV + +DR LL
Sbjct: 846 REIAQCGRRLSG--------RRMRAIHVP---PRVVIDNRASNTCTVVEINGRDRPGLLH 894
Query: 263 DVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRV-------IQCLE 315
DV L++ + + A I T G RA FY++ + G I+ + R+ +Q E
Sbjct: 895 DVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAE 954
Query: 316 AAVGRRASE 324
AA R++SE
Sbjct: 955 AAAQRQSSE 963
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 867 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 926
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I +L
Sbjct: 927 DLFGLKITDKGRLDRIRTTL 946
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G +++ H T L ES + ++ET + G+T + + D GL S
Sbjct: 722 GSYWLSFDHDTHARHALLIGESERQHSPLTVET----QPLPARGVTEVTIYAADHPGLFS 777
Query: 132 EVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
++ +A S+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G
Sbjct: 778 KIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAG-GAAFEEPQQLGRLSLLIEQALTG 836
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ ++ + RRL RM + P V + N A + +VV
Sbjct: 837 -------HLNINREIAQCGRRLSG--------RRMRAIHVP---PRVVIDNRASNTCTVV 878
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRV 310
+ +DR LL DV L++ + + A I T G RA FY++ + G I+ + RV
Sbjct: 879 EINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKERLDRV 938
Query: 311 -------IQCLEAAVGRRASE 324
+Q EAA RR+SE
Sbjct: 939 RTTLLAGLQEAEAAAQRRSSE 959
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 863 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 922
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + + +L
Sbjct: 923 DLFGLKITDKERLDRVRTTL 942
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL DVT E L + A ++T A+++FYV D G
Sbjct: 878 VEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 926
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 15/68 (22%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP+A + + VLT+L L++ KAYISS
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIV---------------IHVLTNLKLIVTKAYISS 69
Query: 71 DGRFFMDV 78
DG +FMDV
Sbjct: 70 DGGWFMDV 77
>gi|197122569|ref|YP_002134520.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
gi|196172418|gb|ACG73391.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
Length = 930
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 32/201 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
GLT L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GLTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLVRVLAGEEPL-DALMT---------RRLRASSVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERAYLEFYIRHIDGTPISSE 304
G RA FY+R DG P+ E
Sbjct: 893 GHRAADAFYVRAADGRPLEGE 913
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
DR GLL V RTF E G++V A ++TE A + FYV G P
Sbjct: 865 DRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRAADGRP 909
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G +++ H T +L ES + ++ET + G+T + + D GL S
Sbjct: 711 GSYWLSFDHDTHARHARLISESERVHSPLTVET----QPLPARGVTEVTIYAADHPGLFS 766
Query: 132 EVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
++ +A S+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G
Sbjct: 767 KIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAG-GAAFEEPQQLARLSLLVEQALTG 825
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ ++ + RR+ RM + P V + N A + +VV
Sbjct: 826 -------HLNINREIAQCGRRVSG--------RRMRAIHVP---PRVVIDNRASNTCTVV 867
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRV 310
+ +DR LL DV L++ + + A I T G RA FY++ + G I+ + R+
Sbjct: 868 EINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKGRLDRI 927
Query: 311 -------IQCLEAAVGRRASE 324
+Q EAA RR+SE
Sbjct: 928 RTTLLAGLQEAEAAAQRRSSE 948
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 852 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 911
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I +L
Sbjct: 912 DLFGLKITDKGRLDRIRTTL 931
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R ++ +T + + D GL S++ +A ++V+AK+ T NG +V+D +
Sbjct: 720 RVDAQRAVTEMVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQD-SE 778
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+P + +++R+ + VL G RL Q + + + +P
Sbjct: 779 GAPFDSPAKLNRLANTIEQVLSG------------------RLRLAQELASRKG--NLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++V+ + +DR LL+D+ +T + + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGER 878
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G + E + +R+ L AA+
Sbjct: 879 VVDVFYVKDVFGHKVEHERKLERIRVTLLAAL 910
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+++++ R G+L + +T L L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ E + I +L
Sbjct: 887 DVFGHKVEHERKLERIRVTL 906
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL D+T + GL ++ A +ST + +++FYV D G+
Sbjct: 842 IEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGH 891
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ +A S+V+A++ T NG ++++D G+ E+
Sbjct: 707 GVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAG-GAAFEE 765
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
QQ+ R+ + L G DI + + RRL RM +
Sbjct: 766 PQQLGRLSLLIEQALTGHIDI-------NREIAQCGRRLSG--------RRMRAIHVP-- 808
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N A + +VV + +DR LL D+ L++ + + A I T G RA FY+
Sbjct: 809 -PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYV 867
Query: 294 RHIDGTPISSEPERQRV-------IQCLEAAVGRRASE 324
+ + G I+ R+ +Q EAA RR+SE
Sbjct: 868 KDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSE 905
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 809 PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVK 868
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + I +L
Sbjct: 869 DLFGLKITDRERLDRIRTTL 888
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL ++ A L++ + + A + T+ R + YVKD G I D
Sbjct: 819 NTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 877
Query: 174 SQQIDRIEARL 184
+++DRI L
Sbjct: 878 RERLDRIRTTL 888
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T + + D GL S++ ++ ++V+AK+ T +A ++ N G+
Sbjct: 720 TDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGT 779
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+ D ++DR+ + N L G + + R ++P
Sbjct: 780 AVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTRVF-----------KVP--- 825
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P V V N A ++Y+V+ V +DR L+DV LT + A + T GER
Sbjct: 826 -----PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVD 880
Query: 290 EFYIRHIDGTPISSEPERQRVIQCL 314
FY++ + G I E + ++V + L
Sbjct: 881 VFYVKDVFGMKIEHEGKLKQVRETL 905
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T T+++V+ R G L + LT L I A +++ G +DVF+V
Sbjct: 826 PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E + + ++L
Sbjct: 886 DVFGMKIEHEGKLKQVRETL 905
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR-------SNSFNGL------------ 116
+DVF V D +G +TDE + + + +E G+ + +GL
Sbjct: 768 LDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTRVFKVPPR 827
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
T +E+ G DR G L +V A L + A+V T R+ + YVKD
Sbjct: 828 VVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKDV 887
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKGD 191
G IE ++ ++ L + L G+
Sbjct: 888 -FGMKIEHEGKLKQVRETLMDTLNGE 912
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T + + D GL +++ +A S+V+A++ T NG ++++D +G ++
Sbjct: 780 GVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDA-TGEAFDE 838
Query: 174 SQQIDRIEARLRNVLKGDNDIRS--AKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ + L G DI + AK S + R +H +P
Sbjct: 839 PHRLTKLFSITERALSGRLDIATEIAKTNASGQLLSRTRAIH-----------VP----- 882
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P V + N A S++V+ + +DR LL DV L +M ++ A I T G RA F
Sbjct: 883 ---PRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVF 939
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAVGR 320
Y++ + G ++ E +++ L A + +
Sbjct: 940 YVKDLSGMKVTDENRLKKIRDRLMAGLKK 968
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T+++++ R G+L + L ++ L I A+I++ G +DVF+V
Sbjct: 883 PRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVK 942
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL+G K+TDE+ + I L
Sbjct: 943 DLSGMKVTDENRLKKIRDRL 962
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V + L +++ + A + T+ R + YVKD SG + D
Sbjct: 893 NSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDL-SGMKVTD 951
Query: 174 SQQIDRIEARLRNVLK 189
++ +I RL LK
Sbjct: 952 ENRLKKIRDRLMAGLK 967
>gi|220917353|ref|YP_002492657.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955207|gb|ACL65591.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
Length = 930
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
GLT L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + +A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLVRVLAGEEPL-AALMT---------RRLRASSVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERAYLEFYIRHIDGTPISSE 304
G RA FY+R DG P+ E
Sbjct: 893 GHRAADAFYVRTSDGRPLEGE 913
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
DR GLL V RTF E G++V A ++TE A + FYV G P
Sbjct: 865 DRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRTSDGRP 909
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D G E+
Sbjct: 754 GVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQD-GEGCSFEE 812
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH-TERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G DIR + A H T RR+ +
Sbjct: 813 PHQLGRLNHLVEQALSGRLDIRKG---IEDASHHSTSRRMRAIHVP-------------- 855
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N A ++V+ V +DR LL DV L+ + A I T G RA FY
Sbjct: 856 --PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFY 913
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAV 318
+R + G I+ R+ + L A++
Sbjct: 914 VRDLLGMKITDPVRLARLRETLLASL 939
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + L+ +L I A+I++ G +DVF+V
Sbjct: 856 PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVR 915
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD ++ + ++L
Sbjct: 916 DLLGMKITDPVRLARLRETL 935
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV +DN + T+++V+ R G+L + ++DLNL I+ A+IS+ G +DVF+VT
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T E+ I IE L+ +
Sbjct: 896 DLIGTKITSETRIERIEVRLKRV 918
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N LT +E+ G DR GLLS+V ++DL + A + T+ ++ + YV D G+ I
Sbjct: 846 NQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDL-IGTKITS 904
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+I+RIE RL+ V + S+ + +S
Sbjct: 905 ETRIERIEVRLKRVFESPEGEMSSPVVMS 933
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R++ F +T + + D LLS + A ++ +A+++T + A + + +
Sbjct: 731 RTDRFREVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDVMLLNREFE 790
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
S ++ ++ +RI A + +L+G +M S+ R ++ FA +
Sbjct: 791 SDEDEIRRAERICANIGKLLQG------REMPASLLANRRPPRSTEL-FAVK-------- 835
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V+V N +V+ V+ DR LL DV ++D+ + A I+T GE+
Sbjct: 836 ------PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVV 889
Query: 289 LEFYIRHIDGTPISSEPERQRV 310
FY+ + GT I+SE +R+
Sbjct: 890 DVFYVTDLIGTKITSETRIERI 911
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
DR GLL+DVT + L++ A +ST ++ +++FYVTD +G
Sbjct: 857 DRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDLIGT 900
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 22/206 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D G E+
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAE-GCSFEE 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT-ERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G DIR ++ A H RR+ +
Sbjct: 808 PHQLGRLNHLVEQALSGRLDIRQG---IAEASHHGLSRRMRAIHVP-------------- 850
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N A ++V+ V +DR LL DV L+ + A I T G RA FY
Sbjct: 851 --PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFY 908
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAV 318
+R + G I R+ + L A++
Sbjct: 909 VRDLLGMKIVDPVRLNRIREALLASL 934
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ D ++ I ++L
Sbjct: 911 DLLGMKIVDPVRLNRIREAL 930
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 47/211 (22%)
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
H M D D R PV + YP+ DR + + V C D L + L
Sbjct: 724 HARMIHDSDRYRSPVTVEA--YPI------PDRGVTELTVLCADHPGLFSQIAGALAVAG 775
Query: 273 YVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGRRAS--EGVR-- 327
+ A I+T + L+ F+++ +G + R+ +E A+ R +G+
Sbjct: 776 ASIVDARIHTLSDGMALDTFWVQDAEGCSFEEPHQLGRLNHLVEQALSGRLDIRQGIAEA 835
Query: 328 ------------------------------LELCMEDRQGLLADVTRTFRENGLNVTRAE 357
+E+ DR GLL DVT L ++ A
Sbjct: 836 SHHGLSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAH 895
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
++T A+++FYV D +G KI++ VR
Sbjct: 896 ITTYGMRAVDVFYVRDLLGM----KIVDPVR 922
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 56/83 (67%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ +DN++ T+++V+ R G+L + ++DL+L I+ A+IS+ G +D F+VT
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T E+ I+ IE+ L+++
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSV 939
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P +TV N +V+ V+ DRT LL D+ ++D+ + A I+T GE+ FY+
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 295 HIDGTPISSEPE----RQRVIQCLEAAVGRRAS 323
+ G ++SE + +R+ LE+A G +S
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSVLESAEGEVSS 949
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
DR GLLAD+T + L++ A +ST ++ ++ FYVTD +G
Sbjct: 878 DRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDLIG 920
>gi|86158117|ref|YP_464902.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774628|gb|ABC81465.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 930
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
G+T L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GVTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLARVLAGEEPL-DALMT---------RRLRASTVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVI 311
G RA FY+R DG P+ + +RV+
Sbjct: 893 GHRAADAFYVRTADGRPLEGA-QAERVV 919
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
DR GLL V RTF E G++V A ++TE A + FYV G P
Sbjct: 865 DRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRTADGRP 909
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R + G + L LT DR GLL+ V VLA + + A+V++
Sbjct: 724 RHHHALGYSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFS----------------- 766
Query: 169 SPIEDSQQIDRIEARLRNV--LKGDND-------IRSAKMTVSMAVTHTE-------RRL 212
D + R+ R +V L+G ++ R+A+ ++ + E RRL
Sbjct: 767 --TPDGSDLGRLAGRALDVFELRGPDERAVEPARWRAARTDLARVLAGEEGLDALLARRL 824
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
++ R+P V + N + R++SVV+V DR LL + T ++
Sbjct: 825 RASSLPEKPLPRVPT--------KVVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELG 876
Query: 273 YVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGR 320
V A I T G RA FY+R DG P+ E RV+ L AAV R
Sbjct: 877 LSVDLARIATEGHRASDAFYVRTPDGAPLEGE-RAARVVAALTAAVSR 923
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 47/197 (23%)
Query: 227 VLRHSTDYPVVT-VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+LR PV T +++ YS +++ +DR LL V L + HA + + +
Sbjct: 710 LLRRGAALPVATALRHHHALGYSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFSTPD 769
Query: 286 ---------RAYLEFYIRHIDGTPISSEPERQRVIQC-----------LEAAVGRR---- 321
RA F +R D + EP R R + L+A + RR
Sbjct: 770 GSDLGRLAGRALDVFELRGPDERAV--EPARWRAARTDLARVLAGEEGLDALLARRLRAS 827
Query: 322 --------------------ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
A +++ DR GLL + RTF E GL+V A ++TE
Sbjct: 828 SLPEKPLPRVPTKVVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLARIATE 887
Query: 362 RDEALNIFYVTDEMGNP 378
A + FYV G P
Sbjct: 888 GHRASDAFYVRTPDGAP 904
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S++ +A ++++A++ T +A + G PI + ++I+R+ +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS-TDYPVVTVQNWA 243
R VL G T+++A E+ R+P H+ T P V + N A
Sbjct: 795 RGVLTG---------TIALARALQEQ-----------APRLPERAHALTVPPRVLIDNQA 834
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
++++V+ V +DR L V LT + + A I+T GER FY++ + G +
Sbjct: 835 SKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKVVH 894
Query: 304 EPERQRVIQCLEAAV 318
+ + ++ + LEAA+
Sbjct: 895 KTKLAQIREALEAAI 909
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G L Q LT + + I A IS+ G +DVF+V
Sbjct: 826 PRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D+ G K+ ++ ++ I ++LE
Sbjct: 886 DVFGMKVVHKTKLAQIREALEA 907
>gi|225449577|ref|XP_002283917.1| PREDICTED: uncharacterized protein LOC100256399 [Vitis vinifera]
gi|296086260|emb|CBI31701.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 154/357 (43%), Gaps = 48/357 (13%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN-KLTDESVIS 96
+ ++ + G+ + +++ + L I + S+DGR+ VF + K+ ES+ +
Sbjct: 23 ITINCPDKAGLGCDLCRIILEFGLCIARGDFSTDGRWCYIVFSFVPCPSSLKIDWESLKN 82
Query: 97 YIEQSLETI--------HYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
+ + + YG S S + L+L DR GLL +V VL++L+ ++ K
Sbjct: 83 RLLSACPSPLFSYCFNQQYGSSPS--PVYMLKLFCLDRNGLLHDVTKVLSELEFTIERVK 140
Query: 149 VWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDI----------RSA 197
V T +GR+ L ++ D + ++ D ARL VL N I RS
Sbjct: 141 VMTTPDGRVLDLFFITD--GMELLHTKKRQDDTCARLLAVLGEFNVICEIQLAGPEYRSQ 198
Query: 198 KMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDR 257
+ S++ E + ++ M L + T +TV N+ +++++ +QC D+
Sbjct: 199 QGCSSLSPEIAEELFGSELLDNK--SNMTKLENGT----ITVDNFLSPAHTLLQIQCLDQ 252
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTA--GERAYLEFYIRHIDGTPISSEPE--------- 306
L +D++ T D + + N + G R ++ +I+ DG I +PE
Sbjct: 253 KGLFYDIMRTSKDCNIQIAYGRFNPSVKGYRN-MDLFIQKTDGKKI-IDPEYQASLCSRL 310
Query: 307 RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
++ ++ L + R + L EL + R + DVT T + G+ + E+
Sbjct: 311 KEEMLHPLRVTITNRGPDAELLVANPVELSGKGRPRVFYDVTCTLKTLGICIFSGEI 367
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF-YIRHIDGTPISSEPERQ 308
+ + C D+ L D+ + + + +T G Y+ F ++ I E +
Sbjct: 23 ITINCPDKAGLGCDLCRIILEFGLCIARGDFSTDGRWCYIVFSFVPCPSSLKIDWESLKN 82
Query: 309 RVIQ---------CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
R++ C G S L+L DR GLL DVT+ E + R +V
Sbjct: 83 RLLSACPSPLFSYCFNQQYGSSPSPVYMLKLFCLDRNGLLHDVTKVLSELEFTIERVKVM 142
Query: 360 TERD-EALNIFYVTDEM 375
T D L++F++TD M
Sbjct: 143 TTPDGRVLDLFFITDGM 159
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T NG + +++D + +D
Sbjct: 759 GVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDA-AQDVFDD 817
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQ----MMFADRDYERMPVLR 229
+++RI + L G DI E+RL + M++ R +R
Sbjct: 818 PHRLERIIELINTALAGTVDI--------------EKRLQECNRHMLYGRR-------MR 856
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P V + N A ++V+ V +DR LL+DV T+ + + + A I T G RA
Sbjct: 857 AIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVD 916
Query: 290 EFYIRHIDGTPISSEPE----RQRVIQCLE 315
FY++ + G + R+ +++ LE
Sbjct: 917 VFYVKDVFGLKVQDRKRLSIVREAILKVLE 946
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + + + + L I A+I++ G +DVF+V
Sbjct: 862 PRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVK 921
Query: 83 DLNGNKLTD--------ESVISYIEQSLETIHYGRSNSFNGLTALELT 122
D+ G K+ D E+++ +E+ E I + NS + +E+T
Sbjct: 922 DVFGLKVQDRKRLSIVREAILKVLEEVEENITGIQPNSTASIVQMEVT 969
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 91/228 (39%), Gaps = 53/228 (23%)
Query: 230 HSTDYPVVTVQNWA--DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
H T+ P+ T++ + DR + V V D L + L + A I+T
Sbjct: 742 HKTEAPL-TIRTYPLPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGM 800
Query: 288 YLEFYIRHIDGTPISSEPER-QRVIQCLEAAV-------------------GRR------ 321
L+ + + +P R +R+I+ + A+ GRR
Sbjct: 801 VLDTFWIQDAAQDVFDDPHRLERIIELINTALAGTVDIEKRLQECNRHMLYGRRMRAIHV 860
Query: 322 ---------ASEGVR-LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
AS G +E+ DR GLL DVT+T +E L ++ A ++T A+++FYV
Sbjct: 861 PPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYV 920
Query: 372 TDEMG-NPADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQTVGV 418
D G D K + VR+ I LKV E E EE G+
Sbjct: 921 KDVFGLKVQDRKRLSIVREAI----LKVLE---------EVEENITGI 955
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
NG T +E+ G DR+GLL +V + + + + A + T+ R + YVKD G ++D
Sbjct: 872 NGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVKDV-FGLKVQD 930
Query: 174 SQQIDRIEARLRNVLK 189
+++ + + VL+
Sbjct: 931 RKRLSIVREAILKVLE 946
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S + LA S+V+A++ T NG +++D G E+
Sbjct: 785 GVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAG-GEAFEE 843
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ A + L G DI K VS RR+ +
Sbjct: 844 PHQLARLSALVEQALSGRVDI--PKEIVSAGRMRYGRRMRAIHVP--------------- 886
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N A +Y+V+ + +DR LL DV ++D + + A I T G RA FY+
Sbjct: 887 -PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 294 RHIDGTPISSE 304
+ + G I+ E
Sbjct: 946 KDLFGLKITDE 956
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + Q ++D L I A+I++ G +DVF+V
Sbjct: 887 PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVK 946
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSE 132
DL G K+TDE + I ++L +GL E T +G +E
Sbjct: 947 DLFGLKITDERRLGEIREAL----------LHGLRQAEEAMTSEIGPPAE 986
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V ++D + + A + T+ R + YVKD G I D
Sbjct: 897 NTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLF-GLKITD 955
Query: 174 SQQIDRIEARLRNVLK 189
+++ I L + L+
Sbjct: 956 ERRLGEIREALLHGLR 971
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL DVT+ ++ L + A ++T A+++FYV D G
Sbjct: 902 IEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 950
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S + LA S+V+A++ T NG +++D G E+
Sbjct: 784 GVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAG-GEAFEE 842
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ A + L G DI K VS RR+ +
Sbjct: 843 PHQLARLSALVEQALSGRVDI--PKEIVSAGRMRYGRRMRAIHVP--------------- 885
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N A +Y+V+ + +DR LL DV ++D + + A I T G RA FY+
Sbjct: 886 -PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 294 RHIDGTPISSE 304
+ + G I+ E
Sbjct: 945 KDLFGLKITDE 955
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + Q ++D L I A+I++ G +DVF+V
Sbjct: 886 PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVK 945
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSE 132
DL G K+TDE + I ++L +GL E T +G +E
Sbjct: 946 DLFGLKITDERRLGEIREAL----------LHGLRQAEEAMTSEIGPPAE 985
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V ++D + + A + T+ R + YVKD G I D
Sbjct: 896 NTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLF-GLKITD 954
Query: 174 SQQIDRIEARLRNVLK 189
+++ I L + L+
Sbjct: 955 ERRLGEIREALLHGLR 970
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL DVT+ ++ L + A ++T A+++FYV D G
Sbjct: 901 IEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 949
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S + LA + +VV+A+ +T N A+ ++ N G+P E + ++ R+ +
Sbjct: 749 DHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQDNDGNPYE-AARLPRLRKMI 807
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
L+G+ + A + D+ +R + T+ ++ N
Sbjct: 808 ERTLRGEVVAKDA-----------------LKDKDKIKKRERAFKVPTN---ISFDNDGS 847
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
Y+++ V +DRT LL+D+ TL + + A I T GE+ FY++ I G SE
Sbjct: 848 EIYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDIVGLKYHSE 907
Query: 305 PERQRVIQCLEAAVGRRASEGV 326
+R + + L A+ + A V
Sbjct: 908 AKRAGLERKLREAIAQGAERAV 929
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + ++ I A I++ G +D F+V D+
Sbjct: 840 ISFDNDGSEIYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDI 899
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNSFNG 115
G K E+ + +E+ L E I G + G
Sbjct: 900 VGLKYHSEAKRAGLERKLREAIAQGAERAVAG 931
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD GL S + LA S+V+A++ T NGR +V+D G+ + ++ R+
Sbjct: 748 TDHPGLFSRIAGALAVAGASIVDARIHTMTNGRALDTFWVQDAQGGA-FDSPHKLARLSV 806
Query: 183 RLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
+ L G D +IR + S RL + R V
Sbjct: 807 LIEQALSGRLNLDQEIRKVRREPS--------RLRAVQVPGR----------------VV 842
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
+ N A +++V+ + +DR LL D+ +++ + A I T G RA FY++ + G
Sbjct: 843 IDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFG 902
Query: 299 TPISSEPERQRVIQCLEAAVG 319
I +E + + + L AA+G
Sbjct: 903 LKIENERKLASLREALLAALG 923
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN T T+++++ R G+L + +++ L I A+I++ G +DVF+V D
Sbjct: 840 RVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKD 899
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G K+ +E ++ + ++L
Sbjct: 900 VFGLKIENERKLASLREAL 918
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 301 ISSEPERQRVIQCLEAAV--GRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ EP R R +Q V ++ +EL DR GLL D+T E GL + A +
Sbjct: 825 VRREPSRLRAVQVPGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHI 884
Query: 359 STERDEALNIFYVTDEMG 376
+T A+++FYV D G
Sbjct: 885 TTYGVRAVDVFYVKDVFG 902
>gi|18405098|ref|NP_565908.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|3355486|gb|AAC27848.1| expressed protein [Arabidopsis thaliana]
gi|330254601|gb|AEC09695.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949474|gb|AEP31950.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 411
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 163/353 (46%), Gaps = 35/353 (9%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ K+ +S
Sbjct: 20 PTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDS 79
Query: 94 V----ISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ +S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM--MFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
+ +R + + AD + + + S++ V+TV N +++++ ++C D+ L
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRCVDQKGLF 255
Query: 262 FDVVCTLTDMEYVVFHATINT--AGERAYLEFYIRHIDGTPISSEPERQ---------RV 310
+D++ T D + + + ++ G R LE ++R DG I +P+ Q +
Sbjct: 256 YDILRTSKDCDVHIAYGRFSSKVKGYRN-LELFVRGTDGNKI-MDPKHQANFCARLKEEM 313
Query: 311 IQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ L + R + L EL + R + DVT + G+ + AE+
Sbjct: 314 VCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D + L + + + + A +T G Y+ F++ TP S P+
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWV-----TPDISSPKI 75
Query: 307 -----RQRVIQ-----------CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+ R++ CL++ V + S + L+ DR+GLL DVT+ E
Sbjct: 76 DWDSLKNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELE 134
Query: 351 LNVTRAEVSTERD-EALNIFYVTDEM 375
+ R +V T D L++F++TD M
Sbjct: 135 FTIQRVKVMTTPDGRVLDMFFITDAM 160
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 53/365 (14%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVIS 96
++ V+ + G+ + + + L I K +S+DG + V V + + L S
Sbjct: 24 IITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWV--IPQSILLPRMSYS 81
Query: 97 YIEQSLETIHYGRSNSF---------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
Y++ L+ I SF + + L+ DR GLL +V VL +L+ ++
Sbjct: 82 YLKDRLQAICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKVLCELELTIQRV 141
Query: 148 KVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
KV T +G++ L +V D + + ++ + RL VL GD+ I+
Sbjct: 142 KVTTTPDGKVLDLFFVTD--NMELLHTRKRQNETCERLNAVL-GDSCIKCELQLAGPEYE 198
Query: 207 HTE----------RRLHQMMFADRDYER------MPVLRHSTDYPVVTVQNWADRSYSVV 250
H + L Q +D D M L+ + + N ++++++
Sbjct: 199 HNQGISSLSPVLANELFQCELSDNDVRSQALSPDMKKLKKAN----AALDNSLSQAHTLL 254
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATI--NTAGERAYLEFYIRHIDGTPISSEPERQ 308
+QC D LL+D++ TL DM + + + N G R L+ +I+ DG I +PE+Q
Sbjct: 255 QIQCADHKGLLYDIMRTLKDMNFKISYGRFLPNVMGYRD-LDIFIQQKDGKKI-LDPEKQ 312
Query: 309 ---------RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVT 354
++ L + R + L EL R + DVT + G+ +
Sbjct: 313 NALCSRLKLEMLHPLRVTIADRGPDTELLVANPVELSGNGRPRVFYDVTFALKTLGICIF 372
Query: 355 RAEVS 359
AEV
Sbjct: 373 SAEVG 377
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI--RHIDGTPISSEPE 306
++ V C D+T L D+ + + ++T G Y+ ++ + I +S
Sbjct: 24 IITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIPQSILLPRMSYSYL 83
Query: 307 RQRVIQCLEAAVGR--------RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ R+ V +S L+ C DR+GLL DVT+ E L + R +V
Sbjct: 84 KDRLQAICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKVLCELELTIQRVKV 143
Query: 359 STERD-EALNIFYVTDEM 375
+T D + L++F+VTD M
Sbjct: 144 TTTPDGKVLDLFFVTDNM 161
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S + +A S+V+A++ T NG ++V+D + G+ E+
Sbjct: 748 GVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTNGMALDTLWVQDAD-GAAFEE 806
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
QQ+ R+ + L G +I +K S + RR+ + +P
Sbjct: 807 PQQLARLSMLVEQALSGQLNI--SKEIASCGRRGSGRRMRAI--------HVP------- 849
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N A + +VV + +DR LL D+ T++D + + A I T G RA FY+
Sbjct: 850 -PRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCME 333
+ + G I+ + + + Q L A + + + RL ++
Sbjct: 909 KDLFGLKITDKARLETIRQTLLAGLQKAEANATRLTSALD 948
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+V+++ R G+L + ++D L I A+I++ G +DVF+V
Sbjct: 850 PRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVK 909
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD++ + I Q+L
Sbjct: 910 DLFGLKITDKARLETIRQTL 929
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL D+T T + L + A ++T A+++FYV D G D +E
Sbjct: 865 VEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKARLET 924
Query: 387 VRQKIGLSNLKVKE 400
+RQ + L+ L+ E
Sbjct: 925 IRQTL-LAGLQKAE 937
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL ++ A ++D + + A + T+ R + YVKD G I D
Sbjct: 860 NACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 918
Query: 174 SQQIDRIEARL 184
+++ I L
Sbjct: 919 KARLETIRQTL 929
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + ++V+A+ +T A+ ++ G P S ++ R+ A
Sbjct: 737 ADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-SDRLPRLRAM 795
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST-DYPV-VTVQN 241
++ LKG+ R A ADRD P R S +P +T N
Sbjct: 796 IQRTLKGEIVAREA-------------------LADRD---KPKKRESAFRFPTHITFDN 833
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
A Y+V+ V +DR LL+D+ TL D + A I T G + FY++ + G +
Sbjct: 834 EASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKL 893
Query: 302 SSEPERQRVIQCLEAAVGRRASEGVRLE 329
+ R+ + + L A+ A R E
Sbjct: 894 HQQNRREALEKKLRQAIKDGAERAERAE 921
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 829 ITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM 888
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 889 FGLKLHQQNRREALEKKL 906
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TRT +N + + A ++T + ++ FYV D G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 890
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +SF +T + + +D GL S++ +A ++V+AK+ T NG ++++ +
Sbjct: 718 RIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESD- 776
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + VL G RL + + A + ++P
Sbjct: 777 GAAFDTPSKLAKLSTVIEQVLSG------------------RMRLDKELAARKG--KLPA 816
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V + N A S++++ V +DR LL+D+ +T + + A I+T GER
Sbjct: 817 RAHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGER 876
Query: 287 AYLEFYIRHIDGTPISSEPERQRV 310
FY++ I G + E + +++
Sbjct: 877 VVDVFYVKDIFGLKVQHERKLEQI 900
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN + TL++V+ R G+L + +T L L I A+IS+ G +DVF+V
Sbjct: 825 PRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVK 884
Query: 83 DLNGNKLTDESVISYI 98
D+ G K+ E + I
Sbjct: 885 DIFGLKVQHERKLEQI 900
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 305 PERQRVIQCLEAAV--GRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTER 362
P R V + + + +S +E+ DR GLL D+T + GL + A +ST
Sbjct: 815 PARAHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYG 874
Query: 363 DEALNIFYVTDEMG 376
+ +++FYV D G
Sbjct: 875 ERVVDVFYVKDIFG 888
>gi|224100951|ref|XP_002312081.1| predicted protein [Populus trichocarpa]
gi|222851901|gb|EEE89448.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 159/365 (43%), Gaps = 49/365 (13%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD------LNGNK 88
T+V V+ + G+ + +++ + L I +A +DG++ VF V L+ +
Sbjct: 20 PTVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNSLRLDWDS 79
Query: 89 LTDESVISYIEQSLETIHYGRSNSFNGLTA------LELTGTDRVGLLSEVFAVLADLQC 142
L + +I L ++Y + NG TA L+ DR GLL ++ VL +L+
Sbjct: 80 LKNRLLIVS-PPCLAPLYY--DHKLNGSTAAPSVYLLKFCCVDRKGLLHDITEVLTELEF 136
Query: 143 SVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTV 201
++ KV T + ++ L ++ D + ++ D L +V K S ++ +
Sbjct: 137 TIQRLKVMTTPDEKVVDLFFITD--GRELLHTKERRDNTCGYLCDVFK--EYCISCELQL 192
Query: 202 SMAVTHTERRLHQM-------MFADRDYER---MPVLRHSTDYP---VVTVQNWADRSYS 248
+ +R + +F+ E+ L +T P +VTV N +++
Sbjct: 193 AGPECENQRTFSSLPMAVAEELFSCELSEKESCTQALGTATTPPKKAIVTVDNLLSPAHT 252
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY-LEFYIRHIDGTPISSEPE- 306
++ +QC D+ L +D++ T D+ V + +++ + + ++ IR DG I +PE
Sbjct: 253 LLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHNMDLLIRQTDGKKI-VDPEL 311
Query: 307 --------RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNV 353
++ ++ L + R + L ELC + R + DVT T ++ G+ +
Sbjct: 312 LANTCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYDVTLTLKKLGICI 371
Query: 354 TRAEV 358
AE+
Sbjct: 372 FSAEI 376
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI-R 294
V+ Q +VV V C D++ L D+ + + + A T G+ Y+ F++ +
Sbjct: 9 VLIQQGSGSNDPTVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQ 68
Query: 295 HIDGTPISSEPERQRVI----QCLEAAV------GRRASEGVRL-ELCMEDRQGLLADVT 343
+ + + + R++ CL G A+ V L + C DR+GLL D+T
Sbjct: 69 RSNSLRLDWDSLKNRLLIVSPPCLAPLYYDHKLNGSTAAPSVYLLKFCCVDRKGLLHDIT 128
Query: 344 RTFRENGLNVTRAEVSTERDE-ALNIFYVTD 373
E + R +V T DE +++F++TD
Sbjct: 129 EVLTELEFTIQRLKVMTTPDEKVVDLFFITD 159
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 16/181 (8%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVFHVT 82
V +DN + P TL+++ + G+ + ++ DLN+ + SS G MD+ +
Sbjct: 241 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHNMDLL-IR 299
Query: 83 DLNGNKLTDESVISYIEQSL--ETIH--------YGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D +++ L E +H G +EL G R + +
Sbjct: 300 QTDGKKIVDPELLANTCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYD 359
Query: 133 VFAVLADLQCSVVEAKVWTHNG---RIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
V L L + A++ H+ + ++ D N P+ SQ ++I R+R L
Sbjct: 360 VTLTLKKLGICIFSAEIGRHSTQDRQWEVYRFLLDENCDVPLASSQARNQIVDRIRRTLM 419
Query: 190 G 190
G
Sbjct: 420 G 420
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 158/368 (42%), Gaps = 51/368 (13%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT---- 90
T+V V+ + G+ + +++ + L I +A +DG++ V V L + L
Sbjct: 20 PTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQLQHSNLLRLDW 79
Query: 91 ---DESVISYIEQSLETIHYGRSNSFNGLTA------LELTGTDRVGLLSEVFAVLADLQ 141
++ L ++Y NG +A L+ DR GLL +V VL +L+
Sbjct: 80 DSLKNRLLRVSPPCLTPLYY--DQKLNGSSAAPSVYLLKFCCVDRKGLLHDVTEVLTELE 137
Query: 142 CSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMT 200
++ KV T +G++ L ++ D + ++ D L +V + ++
Sbjct: 138 FTIQRLKVMTTPDGKVVDLFFITD--GRELLHTKKRRDDTCRYLYDVFR--EYCIGCELQ 193
Query: 201 VSMAVTHTERRLHQM-------MFADRDYER---MPVLRHSTDYP---VVTVQNWADRSY 247
++ T+R L + +F+ E+ M LR +T P +VTV N ++
Sbjct: 194 LAGPECDTQRNLSSLPLVVAEELFSCELSEKESCMQALRTATTSPKKAIVTVDNLLSPAH 253
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA--GERAYLEFYIRHIDGTPISSEP 305
+++ +QC D+ L +D++ D+ V + +++ G R ++ +++ DG I +P
Sbjct: 254 TLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRN-MDLFVQQTDGKKI-LDP 311
Query: 306 E---------RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGL 351
+ ++ ++ L + R + L ELC + R + DVT ++ G+
Sbjct: 312 KLLDNLCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYDVTLALKKLGI 371
Query: 352 NVTRAEVS 359
+ AE+
Sbjct: 372 CIFSAEIG 379
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI-- 293
V+ Q + ++V V C D++ L D+ + + + A T G+ Y+ ++
Sbjct: 9 VLIQQGNSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQ 68
Query: 294 -RHIDGTPISSEPERQRVIQ----CL------EAAVGRRASEGVRL-ELCMEDRQGLLAD 341
+H + + + + R+++ CL + G A+ V L + C DR+GLL D
Sbjct: 69 LQHSNLLRLDWDSLKNRLLRVSPPCLTPLYYDQKLNGSSAAPSVYLLKFCCVDRKGLLHD 128
Query: 342 VTRTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
VT E + R +V T D + +++F++TD
Sbjct: 129 VTEVLTELEFTIQRLKVMTTPDGKVVDLFFITD 161
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--MDVFHVT 82
V +DN + P TL+++ + G+ + +++ DLN+ + SS + + MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 83 DLNGNKLTDESVISYIEQSL--ETIH--------YGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D ++ + L E +H G +EL G R + +
Sbjct: 302 QTDGKKILDPKLLDNLCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYD 361
Query: 133 VFAVLADLQCSVVEAKVWTHNGR-----IASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
V L L + A++ H+ + + + V+ N P+ Q +++ A +R
Sbjct: 362 VTLALKKLGICIFSAEIGRHSTQDRQWEVYRFLLVE--NGEFPLASGQARNQMAAGIRRT 419
Query: 188 LKG 190
L G
Sbjct: 420 LMG 422
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D + G ED
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAD-GCSFED 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH-TERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G D+ +S A RR+ +
Sbjct: 808 PHQLGRLNHLVEQALSGRLDLEKG---ISEARHRGASRRMRAIHVP-------------- 850
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N A ++V+ + +DR+ LL D+ TL+ + A I T G RA FY
Sbjct: 851 --PRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFY 908
Query: 293 IRHIDGTPIS 302
+R + G I+
Sbjct: 909 VRDLLGMKIT 918
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDNA T+++++ R G+L + + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + +++I SL
Sbjct: 911 DLLGMKITDAARLAHIRASL 930
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 47/211 (22%)
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
H M D D R PV + YP+ DR + + V C D L + L
Sbjct: 724 HARMIHDSDRYRSPVTVEA--YPI------PDRGVTELTVLCADHPGLFSQIAGALAVAG 775
Query: 273 YVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGRR---------- 321
+ A I+T + L+ F+++ DG + R+ +E A+ R
Sbjct: 776 ASIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGISEA 835
Query: 322 ----ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAE 357
AS +R +E+ DR GLL D+TRT + L ++ A
Sbjct: 836 RHRGASRRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAH 895
Query: 358 VSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
++T A+++FYV D +G KI +A R
Sbjct: 896 ITTYGMRAVDVFYVRDLLGM----KITDAAR 922
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D GL S + LA + ++V+A+ +T +G ++ +V+D + G+P E+S+ + R+
Sbjct: 749 DHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGD-GNPYEESR-LQRLRQM 806
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L+G+ R A + D+ +R R T +T N
Sbjct: 807 IVRTLRGEVVAREA-----------------LKDKDKIKKRERAFRVDTK---ITFDNDG 846
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL+D+ TL + + A I T GE+ FY++ + G S
Sbjct: 847 SEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVGLKYYS 906
Query: 304 EPERQRVIQCLEAAVGRRASEGV 326
E +RQ + + L A+ + A +
Sbjct: 907 EAKRQSLERKLREAIAQGAQRAI 929
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 17 VIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFM 76
R++T ++ DN T+++VD+ R G+L + + L + ++ I A I++ G +
Sbjct: 833 AFRVDT-KITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVV 891
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFN 114
D F+V D+ G K E+ +E+ L E I G + +
Sbjct: 892 DTFYVKDMVGLKYYSEAKRQSLERKLREAIAQGAQRAIS 930
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 799 REFTDDADELRRAGTIGRMIEDVLAG------RKRLPEVIATRTKNRRKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P VT+ N ++V+ V+C DRT LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
E+ FY+ + G IS+E +R + L+ +
Sbjct: 899 EKVIDSFYVTDLVGQKISNENKRANITARLKPVMA 933
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I A I++ G +D F+VT
Sbjct: 849 PSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
DL G K+++E+ + I L+ + G +
Sbjct: 909 DLVGQKISNENKRANITARLKPVMAGEED 937
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 739 RIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAG 798
Query: 168 GSPIEDSQQIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
G E ++ ++ + VL G D R A V H
Sbjct: 799 GGAFESGDKLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHVP------------ 846
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
P V + N A +++V+ V +DR LL+D+ LT++ + A I+
Sbjct: 847 -------------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKIS 893
Query: 282 TAGERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVG 319
T GE+A FY++ + G ++ E + R+R++ L G
Sbjct: 894 TYGEKAIDVFYVKDVFGLKVTHESKLAQIRERLLHALADPAG 935
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + LT+L L I A IS+ G +DVF+V
Sbjct: 847 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVK 906
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T ES ++ I + L
Sbjct: 907 DVFGLKVTHESKLAQIRERL 926
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TR L ++ A++ST ++A+++FYV D G
Sbjct: 862 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 910
>gi|255088806|ref|XP_002506325.1| predicted protein [Micromonas sp. RCC299]
gi|226521597|gb|ACO67583.1| predicted protein [Micromonas sp. RCC299]
Length = 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 35/181 (19%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQR 309
V V C D+T L D+ T+ D +VV T G+ A++ +R G +S P
Sbjct: 1 VRVTCPDKTGLGSDITRTIFDFGFVVLKGDFATDGKWAFVLVTVRRQGGGAETSAPVNWD 60
Query: 310 VIQ------CL-EAAVGRRASEGVR------------------LELCMEDRQGLLADVTR 344
+++ C +A++ +S +R L++ +EDR GLL DVT+
Sbjct: 61 LLRIRLENLCPSKASISTLSSLNLRSVGEVRDPLEPPKGTMYILQVEVEDRVGLLHDVTQ 120
Query: 345 TFRENGLNVTRAEVSTE-RDEALNIFYVTDEMGN-PADPKIIE--------AVRQKIGLS 394
+ L V RA +ST D A+++FYVTDE PA+ ++ E AVRQ G S
Sbjct: 121 ELWASELTVHRAHISTSPADTAVDLFYVTDERNELPAEARVAEISRNVQRTAVRQTFGES 180
Query: 395 N 395
Sbjct: 181 G 181
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T+V+V+ R G+L + LT LNL I A +++ G +DVF+V
Sbjct: 849 PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVK 908
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E+ ++ I Q+L
Sbjct: 909 DVFGLKVTHEAKLTQIRQAL 928
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D GL S + LA ++V+A+++T + +A ++ G E
Sbjct: 747 GVTDLTVYTADHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESP 806
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ R+ + L G+ + MA +RR + R + ++P
Sbjct: 807 DKLARLAVLVEKALAGE---------LRMADELAKRRSATLPSRARVF-KVP-------- 848
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V N A +++VV V DR LL+ V LT + + A + T G A FY++
Sbjct: 849 PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVK 908
Query: 295 HIDGTPISSEPERQRVIQCL 314
+ G ++ E + ++ Q L
Sbjct: 909 DVFGLKVTHEAKLTQIRQAL 928
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D + G ED
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAD-GCSFED 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ + L G D+ K RR+ +
Sbjct: 808 PHQLGRLNHLVEQALSGRLDLE--KGIAEARHRGASRRMRAIHVP--------------- 850
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N A ++V+ + +DR LL D+ TL+ + A I T G RA FY+
Sbjct: 851 -PRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYV 909
Query: 294 RHIDGTPISSEPER 307
R + G I ++P R
Sbjct: 910 RDLLGMKI-TDPAR 922
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T+++++ R G+L + + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + +++I SL
Sbjct: 911 DLLGMKITDPARLAHIRDSL 930
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 46/226 (20%)
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
H M D D R PV + YP+ DR + + V C D L + L
Sbjct: 724 HARMIHDSDRYRSPVTVEA--YPI------PDRGVTELTVLCADHPGLFSQIAGALAVAG 775
Query: 273 YVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGRR---------- 321
+ A I+T + L+ F+++ DG + R+ +E A+ R
Sbjct: 776 ASIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGIAEA 835
Query: 322 ----ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAE 357
AS +R +E+ DR GLL D+TRT + L ++ A
Sbjct: 836 RHRGASRRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAH 895
Query: 358 VSTERDEALNIFYVTDEMG-NPADPKIIEAVRQKI--GLSNLKVKE 400
++T A+++FYV D +G DP + +R + L+ L VK+
Sbjct: 896 ITTYGMRAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKK 941
>gi|392376054|ref|YP_003207887.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Candidatus
Methylomirabilis oxyfera]
gi|258593747|emb|CBE70088.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
[Candidatus Methylomirabilis oxyfera]
Length = 932
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 94 VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
VI+ +++ E + G + + R G ++V L +++ A+++T
Sbjct: 720 VIARVQRGEEAASQWAAFPLAGYSEFTVCACGRHGRFAQVVGTLTASGMNILSAQIFTLA 779
Query: 154 GRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
+ + D G IED DR+ A L+ VL G TV++ H
Sbjct: 780 SGMVIRHFRVDNGRGVAIEDPAVWDRVVADLQEVLTG---------TVAV---------H 821
Query: 214 QMMFADRDYERMPVLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
++ + R + ++ T +P+ V N ++Y+V++++ +DR LL+ + TL+ +E
Sbjct: 822 DLIKSRRKEVLVRPIQQGTVFPIKVEFDNLVSQAYTVLDIRTRDRLGLLYLITSTLSQLE 881
Query: 273 YVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLE 329
+ A I T E+ FY+ + DG+ + E GRRA G+ LE
Sbjct: 882 VDIRSAKITTEAEQVVDVFYVTNKDGSKLIDE--------------GRRAQIGIELE 924
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V DN V T++ + + R G+L L+ L + I+ A I+++ +DVF+VT+
Sbjct: 845 KVEFDNLVSQAYTVLDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYVTN 904
Query: 84 LNGNKLTDESVISYIEQSLETI 105
+G+KL DE + I LE +
Sbjct: 905 KDGSKLIDEGRRAQIGIELERV 926
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII-EA 386
L++ DR GLL +T T + +++ A+++TE ++ +++FYVT++ G+ K+I E
Sbjct: 859 LDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYVTNKDGS----KLIDEG 914
Query: 387 VRQKIGL 393
R +IG+
Sbjct: 915 RRAQIGI 921
>gi|168006925|ref|XP_001756159.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692669|gb|EDQ79025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 422
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 146/361 (40%), Gaps = 45/361 (12%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
+ ++ + G+ + +++ + L + K +S+DGR+ VT + S++
Sbjct: 23 ITINCPDKVGLGCDLARIVFEFGLSVTKGDMSTDGRWCFVALWVTPRSRPSTVRWSLL-- 80
Query: 98 IEQSLETIHYGRSNSF-----------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+Q LE + S + L++ +DR GLL +V L +++ ++ +
Sbjct: 81 -KQRLEDVCPSALASILTPVSPPVPEAKRVLLLQVCSSDRTGLLHDVAQKLWEMELTIHK 139
Query: 147 AKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR L +V D + P + ++ + + +L+ L + + S
Sbjct: 140 IKVSTSPDGRAVDLFFVTDNRNKQPWK--KRAEEVTNQLKEFLGEPCSLCEISLAGSECG 197
Query: 206 THTERRLHQMMFADRDYERMPVLR--------------HSTDYPVVTVQNWADRSYSVVN 251
T L + D YE H + VVTV+N +S+V
Sbjct: 198 GLTCFPLPATITKDIFYEDPATFEKGNTKSEKINSRSEHHANEVVVTVENSTSPVHSLVQ 257
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAYLEFYIRHIDGTPISSEPERQRV 310
+ CK R LL+D + T+ D V H I + + ++ G I++ +++ +
Sbjct: 258 LTCKSRKSLLYDCLRTVKDFSLKVAHGRIGMLENGNSEISLFVLGPSGQRITNVQDQKSL 317
Query: 311 IQCLEAAVGR--RASEGVR-----------LELCMEDRQGLLADVTRTFRENGLNVTRAE 357
QC+E VG R G R +E C R +L DVT + + + +A+
Sbjct: 318 AQCVEEEVGHPVRIKVGTRGPDTELLVATPIEKCGRGRPRVLYDVTLALKMLDICIFKAD 377
Query: 358 V 358
+
Sbjct: 378 I 378
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
S + + C D+ L D+ + + V ++T G ++ ++ TP S P
Sbjct: 21 SEITINCPDKVGLGCDLARIVFEFGLSVTKGDMSTDGRWCFVALWV-----TP-RSRPST 74
Query: 307 ------RQRVIQCLEAAVGR----------RASEGVRLELCMEDRQGLLADVTRTFRENG 350
+QR+ +A+ A + L++C DR GLL DV + E
Sbjct: 75 VRWSLLKQRLEDVCPSALASILTPVSPPVPEAKRVLLLQVCSSDRTGLLHDVAQKLWEME 134
Query: 351 LNVTRAEVSTERD-EALNIFYVTD 373
L + + +VST D A+++F+VTD
Sbjct: 135 LTIHKIKVSTSPDGRAVDLFFVTD 158
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D +GS E+
Sbjct: 781 GVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMHGMALDTFWIQD-TAGSAYEE 839
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI + A + MP+ +R
Sbjct: 840 THRLARLSSLIEQALSGQLDIGTE-------------------IARAGFGHMPLRMRAIH 880
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N A +Y+V+ + +DR LL DV +++ + A I T G RA FY
Sbjct: 881 VPPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFY 940
Query: 293 IRHIDGTPISSEPE----RQRVIQCL 314
++ + G I+ + R R++ C+
Sbjct: 941 VKDLFGLKITDKKRLDEIRDRLLSCM 966
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + +++ NL I A+I++ G +DVF+V
Sbjct: 883 PRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVK 942
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I L
Sbjct: 943 DLFGLKITDKKRLDEIRDRL 962
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A +++ + A + T+ R + YVKD
Sbjct: 887 IDNGASNTY---TVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKD 943
Query: 165 CNSGSPIEDSQQIDRIEARL 184
G I D +++D I RL
Sbjct: 944 L-FGLKITDKKRLDEIRDRL 962
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL DVT E L + A ++T A+++FYV D G D K ++
Sbjct: 898 IEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDE 957
Query: 387 VRQKI 391
+R ++
Sbjct: 958 IRDRL 962
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R ++ G+T + + D GL S + +A S+V+A+++T +G +V+D
Sbjct: 756 RIDTHRGVTEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATD 815
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G P + ++ R+ A + + G+ R A + + R+ ++
Sbjct: 816 G-PFDQPTKLARLSAAIHKAMSGELKTRQALREKAAGALPSRTRVFKVP----------- 863
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +++V+ + +DR LL D+ L + V A I+T GE A
Sbjct: 864 -------PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETA 916
Query: 288 YLEFYIRHIDG 298
FY++ + G
Sbjct: 917 IDVFYVKDVFG 927
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++++ R G+L + + L L+L + A IS+ G +DVF+V
Sbjct: 864 PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVK 923
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D+ G K+ S ++ I + L T
Sbjct: 924 DVFGLKVEHASKLAAIREKLLT 945
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEA 386
+EL DR GLL+D+ R + L V+ A++ST + A+++FYV D G + + A
Sbjct: 879 IELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDVFGLKVEHASKLAA 938
Query: 387 VRQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
+R+K+ L+ L Q GE ++ V A
Sbjct: 939 IREKL-LTALAEPGSVSASAQAGEKRRKSATVQAA 972
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID + AT+++V A R G+L E + L+D L I+ A+++ G +D F+VT
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
D G K+T E+V+ + +LE +
Sbjct: 829 DARGRKITSEAVLDEVHAALEAV 851
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
PVV + A +V+ V DR LL ++ TL+D + A + GERA FY+
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGR 320
G I+SE V LEA + R
Sbjct: 829 DARGRKITSEAVLDEVHAALEAVLDR 854
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 322 ASEGVR-LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
ASEG +E+ DR GLLA+++RT ++ L++ A V+ + A++ FYVTD G
Sbjct: 777 ASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDARGR 833
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
++ G T +E++G DR GLL+E+ L+D S+ A V R YV D G
Sbjct: 776 SASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDAR-GRK 834
Query: 171 IEDSQQIDRIEARLRNVL 188
I +D + A L VL
Sbjct: 835 ITSEAVLDEVHAALEAVL 852
>gi|114797974|ref|YP_759248.1| PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
gi|114738148|gb|ABI76273.1| protein-P-II uridylyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 947
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
G AL ++G DR GL +++ LA L ++V A+V+T GRI + ++D G P
Sbjct: 740 GGAVALLVSGKDRTGLFADLAGTLARLGANIVAAQVFTSKGGRIVDVFMLQDAR-GLPYG 798
Query: 173 --DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D ++ ++E + L G S K + RR +
Sbjct: 799 EGDGPRLAKLEQAILGALGGTVPSGSVK-------SRAGRREAAFLV------------- 838
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V + + V++V +DR LL +V L DM+ + A + + GER +
Sbjct: 839 ---QPSVQIHEEVSIEHMVIDVAARDRPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDA 895
Query: 291 FYIRHIDGTPIS--SEPERQRVIQCLEAAVGRRASEG 325
FY++ G+P S+ ++ + + L A + R EG
Sbjct: 896 FYVK--PGSPSGKISKARKEALRERLFAVLLREEPEG 930
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR+ IDN + AT ++ S R G+L++ +Q+ D N+ ++ A IS+ G D+F +T
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL K+ D + +E L I
Sbjct: 827 DLKNKKVKDTKTLKTLEDQLLKI 849
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRH 295
V N+ + Y V V C +R+ +L D+V + + + I + ++ F++
Sbjct: 663 VKFLNYNNNEYGAVIVICPNRSGVLKDIVAGFHSSQINILGSRIISLNNNDIIDVFWVTS 722
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASE---------------------------GVRL 328
I + E++RVIQ + A++ + E
Sbjct: 723 SIQKAIIEKNEQERVIQNITASLNQEELETYQTLFQTKIKVEVEPRITIDNQMSKLATTF 782
Query: 329 ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
++ DRQGLL D+ + F + ++V A++ST ++ +IF +TD
Sbjct: 783 QILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITD 827
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK-VWTHNGRIASLIYVKDCNSGS 169
+ F + A+ + D GL + V +A ++V+A+ V T +G +V+D + S
Sbjct: 721 DRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDR-S 779
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+D ++ R+ + L G+ +R AK + A RD + +
Sbjct: 780 AYDDEVRVARMRDLVGRTLSGE--LRPAKA----------------LAARRDGPKRTDVF 821
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
T P V + N A + +V+ V +DR LLF + L+D+ + A + T GERA
Sbjct: 822 QVT--PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVD 879
Query: 290 EFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G I+ + + RV + L AA+
Sbjct: 880 TFYVKDVFGLKITHQGKLTRVREELLAAL 908
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TPRV+IDN T T+++V + R G+L VL+DL L I A++++ G +D F+V
Sbjct: 824 TPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYV 883
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G K+T + ++ + + L
Sbjct: 884 KDVFGLKITHQGKLTRVREEL 904
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I NA+ T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 830 TPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G+K+T E+ I L+ + G
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAG 916
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
R T P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 825 RAFTVTPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVI 884
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
FY+ + G+ I+SE + + L+A + E
Sbjct: 885 DTFYVTDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 27/232 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS-NSFNGLTALELTGTDRVGLL 130
GRFF D + V + + + +I+ E +L G + ++ +G T + D GLL
Sbjct: 675 GRFF-DSYFVAEDPVTLIANAQLIAAAEDALSI---GTNFDAGSGTTQVRTYSEDHPGLL 730
Query: 131 SEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+ ++ ++++A++ T +G + I ++ + G P D+ Q+DR++ + +VL
Sbjct: 731 MRLAGAISLCGANIIDARIHTTRDGMALNNIGIQ-GHGGQPFGDAHQLDRLKRSIADVLA 789
Query: 190 GDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSV 249
G +R L Q R + V P V VQ A ++V
Sbjct: 790 GKVRLRE--------------ELAQRPLPQRRADAFAV------QPRVLVQPNASNRFTV 829
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
+ V DR LL+ ++ TL D + + A I T GERA FY+ + G +
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDLTGQKL 881
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ T+++V++A R G+L ++ L D + I A+I++ G +D F++T
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KL + +E L
Sbjct: 875 DLTGQKLDGSQRLKGLETRL 894
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 721 RVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 780
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ A + VL G A++ +A + +F ++P
Sbjct: 781 GA-FDSPAKLAKLSACVEQVLSG-----RARLDRELAARKGKLPSRAHVF------KVP- 827
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 828 -------PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERV 880
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G I + +++ L AA+
Sbjct: 881 VDVFYVKDVFGHKIEHGRKLEQIKAALLAAL 911
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 828 PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 887
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 888 DVFGHKIEHGRKLEQIKAAL 907
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL D+T GL ++ A +ST + +++FYV D G+
Sbjct: 843 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH 892
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V IDNA T++++++ R G+L L DL+L I A+I++ G F+D F+V
Sbjct: 859 TPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYV 918
Query: 82 TDLNGNKLTDE 92
TDL G+K+ +E
Sbjct: 919 TDLVGSKILNE 929
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGN------KLTDE-SVISYIEQ----SLETIHYGRSN 111
+++A ++ DG D H+ DL+ + +L D+ +I + S+ + +
Sbjct: 700 LREALLAEDG---TDAAHIADLHYDNYLLSVELPDQIRHAKFIAETDAASIPVATHIATR 756
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSP 170
+F +T + L D LLS + V A ++ +A+++T +GR I+V P
Sbjct: 757 NFEAITEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKDGRALDSIFVGRLYD-DP 815
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ ++ I + VL+G E+RL ++ P R
Sbjct: 816 DDEKRRARNIADTIEKVLRG------------------EKRLSEL----ESQAGKPARRQ 853
Query: 231 S--TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
T P VT+ N A ++V+ ++ DR+ +L + TL D+ + A I T GE+
Sbjct: 854 QAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFV 913
Query: 289 LEFYIRHIDGTPISSE 304
FY+ + G+ I +E
Sbjct: 914 DTFYVTDLVGSKILNE 929
>gi|297823847|ref|XP_002879806.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325645|gb|EFH56065.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ ++ +S
Sbjct: 20 PTIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDS 79
Query: 94 ----VISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM-------MFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRT 258
+ +R + +F ++ S++ V+TV N +++V+ ++C D+
Sbjct: 196 LESVQRFSSLPPVAADELFGPDGFDNS---GSSSNKAVLTVDNQLSPAHTVLQIRCVDQK 252
Query: 259 KLLFDVVCTLTDMEYVVFHATINT--AGERAYLEFYIRHIDGTPISSEPERQ-------- 308
L +D++ T D + + + ++ G R LE ++R DG I +P+ Q
Sbjct: 253 GLFYDILRTSKDCDVHIAYGRFSSKVKGYRN-LELFVRGTDGKKI-VDPKHQANFCARLK 310
Query: 309 -RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
++ L + R + L EL + R + DVT + G+ + AE+
Sbjct: 311 EEMMCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP-ISSEPE 306
++V V C D + L + + + + A +T G Y+ F++ +P I +
Sbjct: 21 TIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDSL 80
Query: 307 RQRVIQ-----------CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+ R++ CL++ V + S + L+ DR+GLL DVT+ E + R
Sbjct: 81 KNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 356 AEVSTERD-EALNIFYVTDEM 375
+V T D L++F++TD M
Sbjct: 140 VKVMTTPDGRVLDMFFITDAM 160
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR+ IDN + T ++ S R G+L++ +Q+ D N+ ++ A IS+ G D+F +T
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL K+ D ++ +E L I
Sbjct: 827 DLKNKKIKDTKILKTLEDQLLKI 849
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGT 299
N+ ++ Y V V C +R+ +L D+V + + + I + ++ F++
Sbjct: 667 NYNNKEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTSSIQK 726
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVR---------------------------LELCM 332
I + E++RVIQ + +++ + E + ++
Sbjct: 727 AIVEKNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTFQILS 786
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DRQGLL D+ + F + ++V A++ST ++ +IF +TD D KI++ + ++
Sbjct: 787 GDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKIKDTKILKTLEDQL 846
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D GSP E ++++ R+
Sbjct: 740 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAE-GSPYE-AERLQRLRD 797
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+R LKGD V E A R +++ + P +T N
Sbjct: 798 MIRKTLKGD-------------VVAGE--------AIRSRDKLKKRERAFKVPTHITFDN 836
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL+D+ TL + + A I T GE+ FY++ + G
Sbjct: 837 EGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFGLKF 896
Query: 302 SSEPERQRVIQCLEAAVGRRASEG-VRLE 329
SE +++ + + L A+ SEG VR E
Sbjct: 897 HSEAKQKALEKKLRTAI----SEGAVRAE 921
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 832 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDM 891
Query: 85 NGNKLTDESVISYIEQSLET 104
G K E+ +E+ L T
Sbjct: 892 FGLKFHSEAKQKALEKKLRT 911
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 734 RVDRGRAVTEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAG 793
Query: 168 GSPIEDSQQIDRIEARLRNVLKGD----NDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
G E ++ ++ + VL G ND+ S + T + T R H
Sbjct: 794 GGAFESGDKLAKLSVMIEKVLSGQLKPLNDL-STRRTTQASRT---RVFH---------- 839
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+P P V + N A +++V+ V +DR LL+D+ L+++ + A ++T
Sbjct: 840 -VP--------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTF 890
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVG 319
GE+A FY++ + G ++ E + ++R++ L+ G
Sbjct: 891 GEKAIDVFYVKDVFGLKVTHEGKLAKIKERLLSALDDPSG 930
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + L++L L I A +S+ G +DVF+V
Sbjct: 842 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVK 901
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E ++ I++ L
Sbjct: 902 DVFGLKVTHEGKLAKIKERL 921
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TR L ++ A+VST ++A+++FYV D G
Sbjct: 857 IEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKDVFG 905
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 36/217 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 737 RIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAG 796
Query: 168 GSPIEDSQQIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
G E ++ ++ + VL G D R A V H
Sbjct: 797 GGAFESGDKLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHVP------------ 844
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
P V + N A +++V+ V +DR LL+D+ LT++ + A I+
Sbjct: 845 -------------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKIS 891
Query: 282 TAGERAYLEFYIRHIDGTPISSEPE----RQRVIQCL 314
T GE+A FY++ + G ++ E + R+R++ L
Sbjct: 892 TYGEKAIDVFYVKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + LT+L L I A IS+ G +DVF+V
Sbjct: 845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVK 904
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E+ ++ I + L
Sbjct: 905 DVFGLKVTHENKLAQIRERL 924
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TR L ++ A++ST ++A+++FYV D G
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 908
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
Q D + V V +R L D+ +D+ V A ++T+ ++ +I D T
Sbjct: 688 QTLTDIGSTQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRSIDIFIIQHDAT 747
Query: 300 --PISSEPERQRVIQCLE-AAVG--------RRAS------------------EGVR--L 328
P+++ +++R+++ LE AA+G RR EG R +
Sbjct: 748 CQPVTASDDQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSIRPDLEGKRTLI 807
Query: 329 ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAV 387
EL DR GLL V R F E GL+++ A+++T + ++FYVTD GN D I +
Sbjct: 808 ELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGNNLYDDDFIHRL 867
Query: 388 RQKI 391
++++
Sbjct: 868 KERL 871
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
TL+++ + R G+L +V + L + A I++ G DVF+VTD GN L D+ I
Sbjct: 805 TLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGNNLYDDDFI 864
Query: 96 SYIEQSLE 103
+++ LE
Sbjct: 865 HRLKERLE 872
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +EL DR GLL+ V V A+ + AK+ T R+ + YV D G+ + D
Sbjct: 805 TLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSR-GNNLYDDDF 863
Query: 177 IDRIEARLRNVLKG 190
I R++ RL + L
Sbjct: 864 IHRLKERLEHELNA 877
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + G P E S ++ R+
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDAD-GHPFE-SDRLPRLRN 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
++ LKG+ R A + D+ +R R T +T N
Sbjct: 797 MIQKTLKGEVVPREA-----------------IKSRDKLKKRERAFRVPTH---ITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + A I T GE+ FY++ + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFH 896
Query: 303 SEPERQRVIQCLEAAVGRRASEGV 326
SE +R + + L AA+ +EGV
Sbjct: 897 SESKRAALERKLRAAI----AEGV 916
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES + +E+ L
Sbjct: 891 FGLKFHSESKRAALERKL 908
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TRT N + + A ++T ++ ++ FYV D G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 5 EWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK 64
+ PA K + P V++D+ TAT+V+V A R G+L +V +D L I+
Sbjct: 5 KAPAPAGNARKAAFEVR-PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIR 63
Query: 65 KAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
A+++S G +D F+V D G K+T E ++ + +LE + R+ + G
Sbjct: 64 SAHVASYGERAVDSFYVVDRKGRKITSEQRVAELRAALEAVLDSRAPAPEG 114
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLLA ++R F + GLN+ A V++ + A++ FYV D G
Sbjct: 37 VEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRKG 85
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
PVV V + A + +VV V DR LL + +D + A + + GERA FY+
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 295 HIDGTPISSEPERQRVIQ---CLEAAVGRRA 322
G I+SE QRV + LEA + RA
Sbjct: 82 DRKGRKITSE---QRVAELRAALEAVLDSRA 109
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 852 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 911
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ + I L+ + G
Sbjct: 912 TDLVGAKITNENRQANIAARLKAVLAG 938
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+ FY+
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
+ G I++E + + L+A + E
Sbjct: 913 DLVGAKITNENRQANIAARLKAVLAGEVDEA 943
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++D+ TAT+V+V A R G+L +V +D L I+ A+++S G +D F+V
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
D G K+T E I+ + +LE + R+ + G
Sbjct: 836 DGKGRKITSEQRIAELRTALEAVLDSRAPAPEG 868
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 33/161 (20%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPIS-SEPER 307
+++ DR L D+ T+ + V A + T E L+ F ++ G P +EP R
Sbjct: 680 ISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYGQAEPRR 739
Query: 308 -QRVIQCLEAAV---------------GRRASEGVR---------------LELCMEDRQ 336
+ ++ LE A R+A+ VR +E+ DR
Sbjct: 740 LKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVSGADRP 799
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
GLLA ++R F + GLN+ A V++ + A++ FYV D G
Sbjct: 800 GLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGR 840
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCNSGSPI--ED 173
T + + DR GL +++ +A L V +A+V T + G + + V+D +G P +
Sbjct: 678 TEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQD-GAGLPYGQAE 736
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+++ + L +G+ I A A + F R
Sbjct: 737 PRRLKALVDALEKAARGEGRISKAPAPAGNA--------RKAAFEVR------------- 775
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
PVV V + A + +VV V DR LL + +D + A + + GERA FY+
Sbjct: 776 -PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYV 834
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRA 322
G I+SE + LEA + RA
Sbjct: 835 VDGKGRKITSEQRIAELRTALEAVLDSRA 863
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 172/399 (43%), Gaps = 47/399 (11%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVIS 96
++ V+ + G+ + +++ D L I K +S+DG + V V + S +
Sbjct: 26 IITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLPMSCSYL- 84
Query: 97 YIEQSLETIHYGRSNSF---------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
+++ L+ I SF + + L+ DR GLL +V VL++L+ ++ +
Sbjct: 85 ILKERLQKICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELELTIQKV 144
Query: 148 KVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRN-VLKGDNDIRSAKMTVSM 203
KV T +GR+ L +V D + Q +R+ A LR+ + + + + +
Sbjct: 145 KVTTTPDGRVLDLFFVTDNKELLHTRNRQDETCERLNAVLRDSCISCELQLAGPEYEYNQ 204
Query: 204 AVTHTERRLHQMMF----ADRDYERMPVLRHSTDYPV--VTVQNWADRSYSVVNVQCKDR 257
++ L + +F +D + + T VT+ N ++++V ++C D
Sbjct: 205 GISSLSPALAEELFRCELSDNEVRAQALSPDMTKLKKTNVTMDNSLSPAHTLVQIRCADH 264
Query: 258 TKLLFDVVCTLTDMEYVVFHA--TINTAGERAYLEFYIRHIDGTPISSEPE--------- 306
LL+D++ TL D+ + + + N+ G R L+ +I+ DG I +PE
Sbjct: 265 KGLLYDIMRTLKDLNMKISYGRFSPNSMGYRD-LDIFIQQKDGKKI-LDPEKQSALCSRL 322
Query: 307 RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV--- 358
+Q ++ L + R + L EL R + DVT + G+ V AEV
Sbjct: 323 KQEMLHPLRVIIANRGPDTELLVANPVELSGMGRPRVFYDVTFALKTVGICVFSAEVGRH 382
Query: 359 -STERDEALNIFYVTDEM-----GNPADPKIIEAVRQKI 391
++ER+ + F + + G A KI+ VR+ +
Sbjct: 383 STSEREWEVYRFLLDENCEFQLTGVAARNKIVNRVRRTL 421
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--M 76
++ V +DN++ P TLV++ A G+L + ++ L DLN+ I S + + +
Sbjct: 238 KLKKTNVTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDL 297
Query: 77 DVFHVTDLNGNKLTD----ESVISYIEQ----SLETIHYGRSNSFNGLTA--LELTGTDR 126
D+F + +G K+ D ++ S ++Q L I R L A +EL+G R
Sbjct: 298 DIF-IQQKDGKKILDPEKQSALCSRLKQEMLHPLRVIIANRGPDTELLVANPVELSGMGR 356
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ +V L + V A+V H+
Sbjct: 357 PRVFYDVTFALKTVGICVFSAEVGRHS 383
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + +VV+A+ +T +G + +++D + G P E S +I R+
Sbjct: 738 DHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDAD-GHPYE-SARIPRLRQM 795
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A M D+ +R R ST ++ N
Sbjct: 796 ILKTLKGEVVPREA-----------------MKSRDKIKKRERAFRVST---AISFDNEG 835
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
++++ V +DR LLFD+ TL + A I T GE+ FY++ + G + S
Sbjct: 836 SEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDMFGLKLYS 895
Query: 304 EPERQRVIQCLEAAVGRRASEG 325
E ++ + LEA + SEG
Sbjct: 896 ETKQ----KALEAKLREAISEG 913
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R +L + + L N+ I A I++ G +D F+V D+
Sbjct: 829 ISFDNEGSEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G KL E+ +E L E I G+ +
Sbjct: 889 FGLKLYSETKQKALEAKLREAISEGQERA 917
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TPRV I+N + T+++V+ R G+L E V++DL+L I A++++ G +DVF+V
Sbjct: 833 TPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYV 892
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+++T+ + S I + L
Sbjct: 893 TDLVGHQITNTTRQSRIRKKL 913
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR G+LSE+ V++DL + A V T ++ + YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDL-VGHQITN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAK 198
+ + RI +L L G+ DI +A+
Sbjct: 903 TTRQSRIRKKLL-ALFGEGDIITAQ 926
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F G+T + + D LLS + A ++V+A+++T +GR I + S
Sbjct: 728 KTHDFEGVTEITVLSPDHPRLLSVIAGACAAAGANIVDAQIFTTSDGRALDTILISREFS 787
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++ ++ R+ + +VL G L +M+ A +R
Sbjct: 788 TDD-DERRRATRVGRLIEDVLSGKT------------------YLPEMLAARTKPKRAAK 828
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
T P V + N ++V+ V+ DR +L ++ ++D+ + A + T GE+
Sbjct: 829 AFKIT--PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKV 886
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
FY+ + G I++ + R+ + L A G
Sbjct: 887 IDVFYVTDLVGHQITNTTRQSRIRKKLLALFG 918
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
DL G K+++E+ +YI L+ + G +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMAGEED 937
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+ FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMA 933
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
DL G K+++E+ +YI L+ + G +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMAGEED 937
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+ FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMA 933
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
DL G K+++E+ +YI L+ + G +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVMAGEED 914
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+ FY+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G IS+E R + L+A +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVMA 910
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 720 RVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 779
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + + VL G RL + + A + ++P
Sbjct: 780 GA-FDSPAKLAKLSSCVEQVLSGRT------------------RLDRELAARKG--KLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGER 878
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G + + +++ L AA+
Sbjct: 879 VVDVFYVKDVFGHKVEHGRKLEQIKAALLAAL 910
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 887 DVFGHKVEHGRKLEQIKAAL 906
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL D+T GL ++ A +ST + +++FYV D G+
Sbjct: 842 VEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH 891
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRKKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G ++++ + + Q L+A + + E
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
>gi|15010738|gb|AAK74028.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
gi|23308377|gb|AAN18158.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
Length = 411
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 162/353 (45%), Gaps = 35/353 (9%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ K+ +S
Sbjct: 20 PTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDS 79
Query: 94 V----ISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ +S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM--MFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
+ +R + + AD + + + S++ V+TV N +++++ ++C D+ L
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRCVDQKGLF 255
Query: 262 FDVVCTLTDMEYVVFHATINT--AGERAYLEFYIRHIDGTPISSEPERQ---------RV 310
+D++ T D + + + ++ G R LE ++R D I +P+ Q +
Sbjct: 256 YDILRTSKDCDVHIAYGRFSSKVKGYRN-LELFVRGTDENKI-MDPKHQANFCARLKEEM 313
Query: 311 IQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ L + R + L EL + R + DVT + G+ + AE+
Sbjct: 314 VCPLRVIIVNRGPDTELLVANPVELSGKGRPRVFYDVTLALKSLGICIFSAEI 366
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D + L + + + + A +T G Y+ F++ TP S P+
Sbjct: 21 TVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWV-----TPDISSPKI 75
Query: 307 -----RQRVIQ-----------CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+ R++ CL++ V + S + L+ DR+GLL DVT+ E
Sbjct: 76 DWDSLKNRLLSACPSCLGSFYFCLQSNVSKPPSLYL-LKFFCRDRKGLLHDVTKVLTELE 134
Query: 351 LNVTRAEVSTERD-EALNIFYVTDEM 375
+ R +V T D L++F++TD M
Sbjct: 135 FTIQRVKVMTTPDGRVLDMFFITDAM 160
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 830 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G+K+T E+ I L+ + G
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAG 916
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
R T P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 825 RAFTVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVI 884
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
FY+ + G+ I+SE + + L+A + E
Sbjct: 885 DTFYVTDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRKKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G ++++ + + Q L+A + + E
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + L++L L I A IS+ G +DVF+V
Sbjct: 841 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVK 900
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E ++ I++ L
Sbjct: 901 DVFGLKVTHEGKLAKIKERL 920
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D +
Sbjct: 734 RVDRGRAVTEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDA-A 792
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G E S ++ ++ + VL G K +A T +F +P
Sbjct: 793 GGAFESSDKLAKLSVMIEKVLSG-----QLKPLNDLATRRTSHASRTRVF------HVP- 840
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +++V+ V +DR LL+D+ L+++ + A I+T GE+A
Sbjct: 841 -------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKA 893
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G ++ E + ++ + L +A+
Sbjct: 894 IDVFYVKDVFGLKVTHEGKLAKIKERLLSAL 924
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TR L ++ A++ST ++A+++FYV D G
Sbjct: 856 IEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKDVFG 904
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T + D G+ S + +A +V++A+ +T + A+ ++ N G P D +
Sbjct: 742 TRAQFVMQDHPGIFSRLTGAIALANANVIDARTYTTSDGYATPVFWIQDNDGKPF-DFSK 800
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
+ +++ + L GD R + V ER ++P TD
Sbjct: 801 LGKLKKLIDQTLAGDVIARDV-LKVRNKYKPRERNF-----------KVP-----TD--- 840
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
+T N Y+++ V +DR LLFD+ TL + + A I T G +A FY++ +
Sbjct: 841 ITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDM 900
Query: 297 DGTPISSEPERQRVIQCLEAA--VGRRAS 323
G I+SE ++Q + L+ A VG AS
Sbjct: 901 IGLKITSENKQQIIKGKLQEAIEVGAEAS 929
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ RH +L + + L + N+ I A I++ G +DVF+V D+
Sbjct: 841 ITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDM 900
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G K+T E+ I+ L E I G S
Sbjct: 901 IGLKITSENKQQIIKGKLQEAIEVGAEAS 929
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGANVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G ++++ + + Q L+A + + E
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 846 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYV 905
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ I L+ + G
Sbjct: 906 TDLVGAKITNENRQGNIAARLKAVLAG 932
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VT+ N ++V+ V+ DRT LL ++ L+D+ + A I T GE+ FY+
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
+ G I++E + + L+A + E
Sbjct: 907 DLVGAKITNENRQGNIAARLKAVLAGEVDEA 937
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGANVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G ++++ + + Q L+A + + E
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
>gi|392408543|ref|YP_006445150.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
gi|390621679|gb|AFM22886.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
Length = 889
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 41/188 (21%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
YS + + +DR L F + T++ + A ++ G A F++ I P++ +P
Sbjct: 688 GYSAITLLTRDRRGLFFRIAGTMSANRINILSAWTHSIGSVAVATFHVNDIPEGPLN-DP 746
Query: 306 ER--------QRVIQ----CLEAAVGRRASE------------------------GVRLE 329
R ++V++ E + RR S +E
Sbjct: 747 ARWEGFKSDFRKVLKGEVDVDELVLARRRSRRPFGTSSVPRFPLKVQVDNAASDRSTIIE 806
Query: 330 LCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
+ DR GLL D+TR GLN++ +++TE D+A +IFYV DE GN KI++ R
Sbjct: 807 VYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQDEFGN----KIMDFDRM 862
Query: 390 KIGLSNLK 397
+ S+LK
Sbjct: 863 EEIRSSLK 870
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIA-SLIYVKDCNSGSPIE 172
G +A+ L DR GL + ++ + +++ A WTH+ G +A + +V D G P+
Sbjct: 688 GYSAITLLTRDRRGLFFRIAGTMSANRINILSA--WTHSIGSVAVATFHVNDIPEG-PLN 744
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
D + + ++ R VLKG+ D+ + RR + F R P+
Sbjct: 745 DPARWEGFKSDFRKVLKGEVDVDELVLA---------RRRSRRPFGTSSVPRFPL----- 790
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V V N A +++ V DR LL+D+ LT + + I T ++A FY
Sbjct: 791 ---KVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFY 847
Query: 293 IRHIDGTPI 301
++ G I
Sbjct: 848 VQDEFGNKI 856
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V +DNA +T+++V + R G+L + + LT L L I I+++ D+F+V D
Sbjct: 791 KVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQD 850
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
GNK+ D + I SL+ N LT++E
Sbjct: 851 EFGNKIMDFDRMEEIRSSLK----------NHLTSME 877
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQ 175
T L + D GL S + +A CS++ A++ T H+G I ++D + + I D Q
Sbjct: 767 TILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGTILDQFRIQDKDRQAVI-DPQ 825
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
+RI + L GD + S +T ++ + +P P
Sbjct: 826 IQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQKAM-----------SVP--------P 866
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
V V N +++V+ V DR LL+ + L + + AT++T GE+ FY++
Sbjct: 867 RVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKD 926
Query: 296 IDGTPISSEPERQRVIQCL 314
+ G I E ++++ Q L
Sbjct: 927 VYGLKIEREASQKKIEQTL 945
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ N T T+++V+ A R G+L + L L L I A +S+ G +DVF+V
Sbjct: 866 PRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVK 925
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ IEQ+L
Sbjct: 926 DVYGLKIEREASQKKIEQTL 945
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+N N T +E+ G DR GLL ++ L L + A V T+ ++ + YVKD G
Sbjct: 872 NNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKDV-YGL 930
Query: 170 PIEDSQQIDRIEARLRNVL 188
IE +IE L V
Sbjct: 931 KIEREASQKKIEQTLMGVF 949
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D GL S + LA ++V+A++ T +G +++D GS +E ++ +I A
Sbjct: 751 ADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS-LEAPHRLAKISA 809
Query: 183 RLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
+ VL G +I A +V V R +H +P P V
Sbjct: 810 VIEQVLSGRLRLATEIEKAANSV---VGGRMRAIH-----------VP--------PRVV 847
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V N A ++V+ V +DR LL DV +T + A I T G RA FY++ + G
Sbjct: 848 VDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
Query: 299 TPISSEPERQRVIQCL-EAAVGR 320
+ +E + ++ L EA GR
Sbjct: 908 LKVQNERKLAQLRSALIEALAGR 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN+ T+++V+ R G+L + +T L I A+I++ G +DVF+V
Sbjct: 844 PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVK 903
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
D+ G K+ +E ++ + +L GR +
Sbjct: 904 DVFGLKVQNERKLAQLRSALIEALAGRPH 932
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL DVT GL + A ++T A+++FYV D G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
T D G+ + + LA + +VV+A+ +T +G + +V+D G P E + ++ R
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQDAE-GHPFE-AARLPR 791
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
+ + LKG+ R A + + ER + V H +T
Sbjct: 792 LTQMIHKTLKGEVVAREA-LKSRDKIKKRERAFN-------------VPTH------ITF 831
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
N Y+++ V +DR LL+D+ TL D + +A I T GE+ FY++ + G
Sbjct: 832 DNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYVKDMFGL 891
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVR 327
SE + ++ LEA + +EG +
Sbjct: 892 KYHSESK----LRGLEAKLRTAITEGAK 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L D N+ I A I+
Sbjct: 814 DKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIA 873
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K ES + +E L T
Sbjct: 874 TYGEQVVDTFYVKDMFGLKYHSESKLRGLEAKLRT 908
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D GL S + LA ++V+A++ T +G +++D GS +E ++ +I A
Sbjct: 751 ADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS-LEAPHRLAKISA 809
Query: 183 RLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
+ VL G +I A +V V R +H +P P V
Sbjct: 810 VIEQVLSGRLRLATEIEKAANSV---VGGRMRAIH-----------VP--------PRVV 847
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
V N A ++V+ V +DR LL DV +T + A I T G RA FY++ + G
Sbjct: 848 VDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
Query: 299 TPISSEPERQRVIQCL-EAAVGR 320
+ +E + ++ L EA GR
Sbjct: 908 LKVQNERKLAQLRSALIEALAGR 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN+ T+++V+ R G+L + +T L I A+I++ G +DVF+V
Sbjct: 844 PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVK 903
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSN 111
D+ G K+ +E ++ + +L GR +
Sbjct: 904 DVFGLKVQNERKLAQLRSALIEALAGRPH 932
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL DVT GL + A ++T A+++FYV D G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
T D G+ + V LA + +VV+A+ +T +G + +++D G P E S+ + R
Sbjct: 728 FTMWDHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDAE-GHPFEASR-LKR 785
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
+ +R LKG+ R A ++ D+ +R R T +T
Sbjct: 786 LSQMIRKTLKGEVIARDA-----------------LVSRDKIKKREKAFRVPTH---ITF 825
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
N Y+++ V +DR LL+D+ +L + +A I T GE+ FY++ + G
Sbjct: 826 DNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFGL 885
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVR 327
S +++ + + L A+ SEG +
Sbjct: 886 KYHSLSKQKTLEKRLREAI----SEGAK 909
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 823 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDM 882
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K S +E+ L E I G
Sbjct: 883 FGLKYHSLSKQKTLEKRLREAISEG 907
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 720 RVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 779
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + VL G RL + + A + ++P
Sbjct: 780 GA-FDSPAKLAKLATCVEQVLSGRT------------------RLDRELAARKG--KLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGER 878
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY++ + G I + ++ L AA+
Sbjct: 879 VVDVFYVKDVFGHKIEHGRKLDQIKAALLAAL 910
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 887 DVFGHKIEHGRKLDQIKAAL 906
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL D+T GL ++ A +ST + +++FYV D G+
Sbjct: 842 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGH 891
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+L+ + L+ + +VV+A+ +T +G ++ +V+D GSP E ++ + R+
Sbjct: 733 DHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQD-REGSPYEKAR-LPRLTTM 790
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+R L G+ + S M + ER + +P +T N
Sbjct: 791 IRKTLMGEV-VASEAMEKRDKIKKRERPFN-----------VPT--------TITFDNEG 830
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL+D+ L + ATI T G + FY++ G + S
Sbjct: 831 SEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFGLKLHS 890
Query: 304 EPERQRVIQCLEAAVGRRA 322
EP R + + L A+ R A
Sbjct: 891 EPRRAALERKLRDAIARVA 909
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTPRVV-IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 809 DKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIA 868
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D G KL E + +E+ L
Sbjct: 869 TYGVQVVDTFYVKDTFGLKLHSEPRRAALERKL 901
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 744 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 799
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 800 REFKDDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTKNRKKSKAFV------ 847
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 848 IP--------PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 899
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + L+A + E
Sbjct: 900 EKVIDTFYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 850 PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S S I L+ +
Sbjct: 910 DLVGQKISGDSKRSNITARLKAV 932
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 744 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 799
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 800 REFKDDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTKNRKKSKAFV------ 847
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 848 IP--------PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 899
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + L+A + E
Sbjct: 900 EKVIDTFYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 850 PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S S I L+ +
Sbjct: 910 DLVGQKISGDSKRSNITARLKAV 932
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 674 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 729
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+DS ++ R I + +VL G K + T T R F
Sbjct: 730 REFPDDSDELRRAATIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 777
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 778 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 829
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + L+A + E
Sbjct: 830 EKVIDTFYVTDLVGQKISGDSKRANITARLKAVMAEEEDE 869
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 780 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 839
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I L+ +
Sbjct: 840 DLVGQKISGDSKRANITARLKAV 862
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA FY
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 293 IRHIDGTPISS----EPERQRVIQCLE 315
++ + G I+ E R+R++ L+
Sbjct: 954 VKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL DVT L + A ++T A+++FYV D G D K +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 387 VRQKIGLSNLK 397
+R+++ L+ LK
Sbjct: 971 IRERL-LAGLK 980
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA FY
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 293 IRHIDGTPISS----EPERQRVIQCLE 315
++ + G I+ E R+R++ L+
Sbjct: 954 VKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL DVT L + A ++T A+++FYV D G D K +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 387 VRQKIGLSNLK 397
+R+++ L+ LK
Sbjct: 971 IRERL-LAGLK 980
>gi|356533259|ref|XP_003535183.1| PREDICTED: uncharacterized protein LOC100789465 [Glycine max]
Length = 411
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 26/293 (8%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
TL+ V+ + G+ + +++ L I + +S+DG++ VF V G + T S+
Sbjct: 20 PTLLTVNCPDKTGLGCDLCRIMLFFGLNIIRGDVSTDGKWCYIVFWVV---GKQRTRWSL 76
Query: 95 IS--YIE-----QSLETIHYGRSN----SFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+ IE S I Y RS+ + + L + DR GLL +V VL +L+ +
Sbjct: 77 LKKRLIEACPSCSSASGISYYRSDLQPSKPSDVFLLNFSCHDRKGLLHDVTEVLCELELT 136
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + KV T +G++ L ++ D + + ++ D L ++ GD I V
Sbjct: 137 IKKVKVSTTPDGKVMDLFFITD--TRELLHTKKRKDETIEHLTEIM-GDAIISIDIELVG 193
Query: 203 MAVTHTERR---LHQMMFADRDYERMPVLRHST---DYPVVTVQNWADRSYSVVNVQCKD 256
+T + L + D E + R T DY +T+ N ++++V + C+D
Sbjct: 194 PEITACSKAPPFLPTAITDIFDLELPDLARGGTLRSDYVSITMDNLLSPAHTLVQIMCQD 253
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQ 308
LL+D++ TL D + + T + ++ +I DG I +P +Q
Sbjct: 254 HKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKI-VDPNKQ 305
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
D +++ V C D+T L D+ + + ++T G+ Y+ F++ T S
Sbjct: 17 DGDPTLLTVNCPDKTGLGCDLCRIMLFFGLNIIRGDVSTDGKWCYIVFWVVGKQRTRWSL 76
Query: 304 EPER--QRVIQCLEAA---------VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLN 352
+R + C A+ + S+ L DR+GLL DVT E L
Sbjct: 77 LKKRLIEACPSCSSASGISYYRSDLQPSKPSDVFLLNFSCHDRKGLLHDVTEVLCELELT 136
Query: 353 VTRAEVSTERD-EALNIFYVTD 373
+ + +VST D + +++F++TD
Sbjct: 137 IKKVKVSTTPDGKVMDLFFITD 158
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA FY
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 293 IRHIDGTPISS----EPERQRVIQCLE 315
++ + G I+ E R+R++ L+
Sbjct: 954 VKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL DVT L + A ++T A+++FYV D G D K +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 387 VRQKIGLSNLK 397
+R+++ L+ LK
Sbjct: 971 IRERL-LAGLK 980
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA FY
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFY 953
Query: 293 IRHIDGTPISS----EPERQRVIQCLE 315
++ + G I+ E R+R++ L+
Sbjct: 954 VKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL DVT L + A ++T A+++FYV D G D K +E
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 387 VRQKIGLSNLK 397
+R+++ L+ LK
Sbjct: 971 IRERL-LAGLK 980
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 719 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 774
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + NVL G K + T T R F
Sbjct: 775 REFADDADELRRAGTIGRMIENVLAG------RKRLPEVIATRTRNRKKSKAFD------ 822
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 823 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 874
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 875 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDE 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 825 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 885 DLVGQKISGDSKRANITARMKAV 907
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + L+ + +VV+A+ +T +G + +V+D + G+P E+++ + R+
Sbjct: 750 ADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSD-GTPFEETR-LPRLRK 807
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ L GD R A FADRD +R R ST +T
Sbjct: 808 MIERTLHGDIVPREA-------------------FADRDKIKKRERAFRVSTS---ITFD 845
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
N Y+++ V +DR LL D+ TL + + A I T GE+ FY++++ G
Sbjct: 846 NEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNMFG 903
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V ++
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 85 NGNKLTDESVISYIEQSL 102
G K ++ +E+ L
Sbjct: 902 FGLKYHEQEKCDALERKL 919
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ I NA+ T++++ R G+L + L+DLNL I A+I + G +DVF+VTDL
Sbjct: 838 IFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDL 897
Query: 85 NGNKLTDESVISYIEQSLETI 105
G K+T + I ++LE +
Sbjct: 898 TGGKITSKVRQKRIHEALEAV 918
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+F G+T + D LLS + S++ A+++
Sbjct: 732 KAFEGITEVTFYTPDHPRLLSLIAGACTTADASIIGAQIFN------------------- 772
Query: 171 IEDSQQIDRIEARLRNVLKGDND--IRSAKMT-VSMAVTHTERRLHQMMFADRDYERMPV 227
+D +D RLR D D IR++++T + A+ + L + D Y R
Sbjct: 773 TKDGYALDTF--RLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADLGVDSRYNRR-- 828
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
L+ + + + N ++V+ + DRT LL+ + L+D+ + A I T GE+A
Sbjct: 829 LKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEA--AVGRR 321
FY+ + G I+S+ ++R+ + LEA A RR
Sbjct: 889 VDVFYVTDLTGGKITSKVRQKRIHEALEAVFAPARR 924
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL +TR + L + A + T ++A+++FYVTD G KI V
Sbjct: 851 IEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG----KITSKV 906
Query: 388 RQK 390
RQK
Sbjct: 907 RQK 909
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + ++V+A+ +T A+ ++ G P + ++ R+
Sbjct: 745 ADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADRLPRLRTM 803
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
++ LKG+ R A + D+ +R R T VT N A
Sbjct: 804 IQRTLKGEIVAREA-----------------LAGRDKPKKREAAFRFPTH---VTFDNEA 843
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+V+ V +DR LL+D+ TL D + A I T G + FY++ + G +
Sbjct: 844 SDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKL-H 902
Query: 304 EPERQRVIQCLEAAVGRRASEGV 326
+P+R+ + LE + + EGV
Sbjct: 903 QPQRR---EALEKRLRQAIKEGV 922
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 837 VTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G KL +E+ L
Sbjct: 897 FGLKLHQPQRREALEKRL 914
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEA 386
+E+ DR GLL D+TRT +N + + A ++T + ++ FYV D G P+ EA
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFGLKLHQPQRREA 909
Query: 387 VRQKI 391
+ +++
Sbjct: 910 LEKRL 914
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR GLL ++ LAD + A + T ++ YVKD G + Q+
Sbjct: 848 TVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM-FGLKLHQPQR 906
Query: 177 IDRIEARLRNVLK 189
+ +E RLR +K
Sbjct: 907 REALEKRLRQAIK 919
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T+++V+ R G+L + + LT LNL I A IS+ G +DVF+V
Sbjct: 842 PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVK 901
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ ++ I + L
Sbjct: 902 DIFGLKVAHEAKLTQIRKEL 921
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCN- 166
R + +T + + D GL S + +A +V+A++ T NG + ++
Sbjct: 733 RYDPGRSVTEVTIYTADHAGLFSRLAGAMALAGGDIVDARITTMTNGMALDVFSLQGAGP 792
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
SG+ + ++ R+++ + L GD K+ +A + +F R+P
Sbjct: 793 SGARFDSGEKRSRLKSSVEKALAGD-----IKLAPELAKRASPLPSRTRVF------RVP 841
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V V N A Y+V+ V +DR LL+D+ LT + + A I+T G
Sbjct: 842 --------PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNA 893
Query: 287 AYLEFYIRHIDGTPISSE 304
A FY++ I G ++ E
Sbjct: 894 AVDVFYVKDIFGLKVAHE 911
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 302 SSEPERQRVIQCL-EAAVGRRASEGVR-LELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
S P R RV + V +AS G +E+ DR GLL D+TR L + A++S
Sbjct: 829 SPLPSRTRVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKIS 888
Query: 360 TERDEALNIFYVTDEMG 376
T + A+++FYV D G
Sbjct: 889 TYGNAAVDVFYVKDIFG 905
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 3 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 58
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 59 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 106
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 107 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 158
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 159 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 198
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 109 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 168
Query: 83 DLNGNKLTDES 93
DL G K++ +S
Sbjct: 169 DLVGQKISGDS 179
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I NA+ ++V++ R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 83 DLNGNKLTDESVISYIEQS-LETIHYGRSNSFNG 115
DL G K+ + I ++ LET+ +G G
Sbjct: 892 DLTGQKIVSPDRLDAICRALLETLEHGVQRPAKG 925
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N +SVV ++ DR LL ++ TL+D+ + A I T GE+ FY+
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 295 HIDGTPISSEPER-----QRVIQCLEAAVGRRAS 323
+ G I S P+R + +++ LE V R A
Sbjct: 892 DLTGQKIVS-PDRLDAICRALLETLEHGVQRPAK 924
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G I
Sbjct: 842 NRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGQKIVS 900
Query: 174 SQQIDRI 180
++D I
Sbjct: 901 PDRLDAI 907
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 852 TPEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 911
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ I L+ + G
Sbjct: 912 TDLVGAKITNENRQINIAARLKAVLAG 938
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+ FY+
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
+ G I++E + + L+A + E
Sbjct: 913 DLVGAKITNENRQINIAARLKAVLAGEVDEA 943
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 799 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 799 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G ++++ + + Q L+A + + E
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
>gi|168057125|ref|XP_001780567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668045|gb|EDQ54661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 55/369 (14%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI-- 95
V ++ + G+ + +V+ + L + K IS+DGR+ V + + S++
Sbjct: 23 VTINCPDKVGLGCDLARVVFEFGLSVTKGDISTDGRWCFVALWVIPRSNPSVVRWSLLKQ 82
Query: 96 -------SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
S + L T+ R S + L++ +DR GLL +V L +++ ++ + K
Sbjct: 83 RLEDVCPSALGSMLPTVAPPRLES-KKILLLQVRSSDRTGLLHDVAQKLWEMELTIHKIK 141
Query: 149 VWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--- 204
V T +GR L +V D + P + ++ + + L+ L G+ + +S+A
Sbjct: 142 VSTSPDGRAIDLFFVTDNRNKDPWK--KRAEEVTKELKEFL-GEP---CSHCEISLAGPE 195
Query: 205 -----VTHTERRLHQMMFAD------RDY----------ERMPVLRHSTDYPVVTVQNWA 243
+ L + +F D +DY E+ + D V V+N
Sbjct: 196 CGGLTCSPLPASLTKDIFYDDPANFEKDYITSEKDHTNSEKDHIRSECHDNNVFIVENNT 255
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN-TAGERAYLEFYIRHIDGTPIS 302
+S++ + CK R LL+D + T+ D V H I + + Y+ +G I+
Sbjct: 256 SPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAMMENGNSEINVYVLGPNGQRIT 315
Query: 303 SEPERQRVIQCLEAAVGR--RASEGVR-----------LELCMEDRQGLLADVTRTFREN 349
E++ ++Q LE VG R G R +E C R +L DVT +
Sbjct: 316 DLQEQKVLVQSLEEEVGHPVRIKVGTRGPDTELLVATSIEKCGRGRPRVLYDVTLALKML 375
Query: 350 GLNVTRAEV 358
+ + +A++
Sbjct: 376 DICIFKADI 384
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-IRHIDGTPISSEPE 306
S V + C D+ L D+ + + V I+T G ++ + I + + +
Sbjct: 21 SEVTINCPDKVGLGCDLARVVFEFGLSVTKGDISTDGRWCFVALWVIPRSNPSVVRWSLL 80
Query: 307 RQRVIQCLEAAVGR----------RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRA 356
+QR+ +A+G + + + L++ DR GLL DV + E L + +
Sbjct: 81 KQRLEDVCPSALGSMLPTVAPPRLESKKILLLQVRSSDRTGLLHDVAQKLWEMELTIHKI 140
Query: 357 EVSTERD-EALNIFYVTDEMGNPADPKIIEAVRQKI 391
+VST D A+++F+VTD K E V +++
Sbjct: 141 KVSTSPDGRAIDLFFVTDNRNKDPWKKRAEEVTKEL 176
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + + ++ +A+++T +GR I + N
Sbjct: 720 RTHSFHAITEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILI---NR 776
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
P+++ + + I + +VL G ++ +A +R ++M +
Sbjct: 777 EFPVDEDELRRAATIGRMIEDVLSGKK-----RLPEVIATRAKAKRRNKMF-------DI 824
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P P V + N ++VV V+C DR LL ++ L D+ + A I T GE
Sbjct: 825 P--------PSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGE 876
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ FY+ + GT I++E + + L+A + + E
Sbjct: 877 KVIDTFYVTDLLGTKITNENRQGNISARLKAVMAEQEDE 915
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++ N + T+V+V+ R G+L E VL DL+L I A I++ G +D F+VT
Sbjct: 826 PSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ I L+ +
Sbjct: 886 DLLGTKITNENRQGNISARLKAV 908
>gi|302770887|ref|XP_002968862.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
gi|300163367|gb|EFJ29978.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
Length = 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS----SDGRFFM 76
+TPRV ID+ + P TL+++ R G+L + ++VL D N + +S GR +
Sbjct: 224 DTPRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEI 283
Query: 77 DVFHVTDLNGNKLTD--------ESVISYIEQSL--ETIHYGRSNSFNGLTALELTGTDR 126
D+F +T +G KL D E V+ + L + G + T +EL+G R
Sbjct: 284 DLF-ITQADGRKLVDPEKQKALCERVVRDVANPLWVTVLPRGPDSELFVATPIELSGKGR 342
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIY-VKDCNSGSPIEDSQQI-DRIEAR 183
+L +V L L + +A + H G + IY V +SG + SQ++ + I R
Sbjct: 343 PRVLYDVTLALKMLDVCIFQADIGRHTIGDMQWEIYRVLLIDSG---DLSQRMHELIGER 399
Query: 184 LRNVLKG 190
+RNVL G
Sbjct: 400 VRNVLMG 406
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/301 (17%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
T++ V+ + G+ + +++ + L + + + +DGR+ + VF ++T
Sbjct: 17 PTVITVNCPDKRGLGCDLTRIIFEFGLSLVRGDVQTDGRWCLLVFWAV----PRITTAKP 72
Query: 95 ISYI-------------EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
I + Q + S L L++ DR GLL ++ +L +L+
Sbjct: 73 IQWGLLRKRMIAACPPENQVFVPVDPDFVTSPLKLFLLQVYSADRAGLLHDMSRILWELE 132
Query: 142 CSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG---DNDIRSA 197
+V + K T +G++ + D P ++ + R++N++ G +++ A
Sbjct: 133 LTVHKVKASTCPDGKVIDFFIISDNKLLLP--SRERTLEVCERIKNLMGGLQSKCELKEA 190
Query: 198 KM----TVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ + + +++ + + + + D P VT+ + +++++ +
Sbjct: 191 GPEYGGLMCTPALNLPPSVSELLSSGVNSQ------QNGDTPRVTIDDLLSPAHTLLQIS 244
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTA---GERAYLEFYIRHIDGTPISSEPERQRV 310
C+DR LL+D + L D Y V + ++ + R ++ +I DG + +PE+Q+
Sbjct: 245 CRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEIDLFITQADGRKL-VDPEKQKA 303
Query: 311 I 311
+
Sbjct: 304 L 304
>gi|225441177|ref|XP_002268949.1| PREDICTED: uncharacterized protein LOC100265834 [Vitis vinifera]
gi|297739971|emb|CBI30153.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 155/375 (41%), Gaps = 58/375 (15%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ N CP T + D R ++ L I + +S+DG++ VF +
Sbjct: 20 PRVLTVN--CPDKTGLGCDLCR----------IILFFGLSIVRVDVSTDGKWCYIVFWII 67
Query: 83 DLNGNKLTDESVIS-YIEQSLETIHYGRSNSFNGLTA--------LELTGTDRVGLLSEV 133
G T S++ + ++ + S+ L L+ DR GLL +V
Sbjct: 68 ---GKSTTRWSLLQDRLSEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDV 124
Query: 134 FAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD- 191
VL +L+ ++ + KV T +GR+ L ++ D + + ++ + L+ VL GD
Sbjct: 125 TEVLCELELTIKKVKVSTTPDGRVMDLFFITD--TRELLHTKKRQEDTHNHLKTVL-GDA 181
Query: 192 ----------NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
++I + T ++ + R + F D +P + + VT+ N
Sbjct: 182 MISCDISMVGSEITACSQTSTLLPSAITREIFGSKFEDEPPSGLPQVSGNIS---VTMDN 238
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTP 300
++++V + C+D LL+D++ TL D + + + T R ++ +I DG
Sbjct: 239 SLSPAHTLVQIVCQDHKGLLYDMMRTLKDYNIKISYGRLTTKPRRNCEVDLFIMQADGKK 298
Query: 301 ISSEPERQ---------RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTF 346
+ +P +Q +++ L AV R + L EL + R + D+T
Sbjct: 299 V-VDPYKQNALCSRLQMELLRPLRVAVVSRGPDTELLVANPVELSGKGRPLVFFDITHAL 357
Query: 347 RENGLNVTRAEVSTE 361
+ + + AE+ +
Sbjct: 358 KMLNVCIFSAEIGRQ 372
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER- 307
V+ V C D+T L D+ + + ++T G+ Y+ F+I T S +R
Sbjct: 22 VLTVNCPDKTGLGCDLCRIILFFGLSIVRVDVSTDGKWCYIVFWIIGKSTTRWSLLQDRL 81
Query: 308 -QRVIQCLEAA-------VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
+ C A+ + + L+ C DR+GLL DVT E L + + +VS
Sbjct: 82 SEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDVTEVLCELELTIKKVKVS 141
Query: 360 TERD-EALNIFYVTD 373
T D +++F++TD
Sbjct: 142 TTPDGRVMDLFFITD 156
>gi|297815750|ref|XP_002875758.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
gi|297321596|gb|EFH52017.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 45/350 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
A ++ V+ R G+ + +++ D L I K +++DG + V V + T
Sbjct: 8 AHVITVNCPDRTGLGCDICRIILDFGLYITKGDVTTDGVWCYIVLWVVP---HYDTLRLR 64
Query: 95 ISYIEQSLETIHYGRSNSF-----------NGLTALELTGTDRVGLLSEVFAVLADLQCS 143
S+++ L ++ S F + L+ DR GLL +V VL +L+ S
Sbjct: 65 WSHLKNQLVSVCPSCSTYFVLNLMSPCPASTPVYLLKFFCLDRNGLLHDVTQVLTELELS 124
Query: 144 VVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ KV T +GR+ L ++ D E Q+ R + R+VL + ++
Sbjct: 125 IQTVKVTTTPDGRVLDLFFITDNMDLLHTEKRQEETR--GKFRSVLG------ESCISCE 176
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
+ + E HQ + +D M L++ + VT N + +++ +QC D LL+
Sbjct: 177 LQLAGPEYECHQNVLSDD----MTKLKNVS----VTFDNSLSPANTLLQIQCVDHRGLLY 228
Query: 263 DVVCTLTDMEYVVFHATINTAGERAY-LEFYIRHIDGTPISSEPERQRVIQCLEAA---- 317
DV+ TL D + + + + + + L+ +I+ DG I ++ + L+A
Sbjct: 229 DVLRTLKDFDIKISYGRFSPQTQGHWDLDLFIQLKDGNKIVDLDKQNSLCSRLKAEMLHP 288
Query: 318 ----VGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ R + L EL + R + DVT + + G+ + AE+
Sbjct: 289 LRVIITNRGPDAELLVANPVELSGKGRPRVFYDVTLSLKVLGICIFSAEI 338
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI-RHIDGTPIS-SEPE 306
V+ V C DRT L D+ + D + + T G Y+ ++ H D + S +
Sbjct: 10 VITVNCPDRTGLGCDICRIILDFGLYITKGDVTTDGVWCYIVLWVVPHYDTLRLRWSHLK 69
Query: 307 RQRVIQC--------LEAAVGRRASEGVRL--ELCMEDRQGLLADVTRTFRENGLNVTRA 356
Q V C L AS V L C+ DR GLL DVT+ E L++
Sbjct: 70 NQLVSVCPSCSTYFVLNLMSPCPASTPVYLLKFFCL-DRNGLLHDVTQVLTELELSIQTV 128
Query: 357 EVSTERD-EALNIFYVTDEM 375
+V+T D L++F++TD M
Sbjct: 129 KVTTTPDGRVLDLFFITDNM 148
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + G P E + ++ R+
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDAD-GHPFE-ADRLPRLRN 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
++ LKG+ R A + D+ +R R T +T N
Sbjct: 797 MIQKTLKGEVVPREA-----------------IKSRDKLKKRERAFRVPTH---ITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + A I T GE+ FY++ + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFGLKFH 896
Query: 303 SEPERQRVIQCLEAAVGRRASEGV 326
S+ +R + + L AA+ EGV
Sbjct: 897 SDSKRAALERKLRAAI----EEGV 916
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K +S + +E+ L
Sbjct: 891 FGLKFHSDSKRAALERKL 908
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TRT N + + A ++T ++ ++ FYV D G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D GL+ ++ LA S+V+A++ T NG +V+D SG + ++ +I
Sbjct: 763 DTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQDT-SGEAFDQPNRLAKIAVL 821
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTE-RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G DI S + T R +H +P P V V N
Sbjct: 822 IEQALSGQLDIDEEIRKASNPLLGTRMRAIH-----------VP--------PRVVVDNH 862
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
A +++V+ V +DR L+ D+ + + A I T G RA FY++ + G +
Sbjct: 863 ASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 922
Query: 303 SEPERQRVIQCLEAAV 318
+E + ++ Q L A+
Sbjct: 923 NERKLAKLRQALLGAL 938
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T T+++V+ R G++ + + L I A+I++ G +DVF+V
Sbjct: 855 PRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVK 914
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ +E ++ + Q+L
Sbjct: 915 DVFGLKVENERKLAKLRQAL 934
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D GL S + LA + +VV+A+ +T +G + +V+D + G P E + ++ R+
Sbjct: 733 SDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDAD-GRPFE-AARLPRLRQ 790
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ + G+ R A M + ER +P L +T N
Sbjct: 791 MIDRTMNGEVVPREA-MKERDKIKKRERAF-----------TVPTL--------ITFDNE 830
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL D+V TL + A I T GE+A FY++ + G
Sbjct: 831 GSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFGLKFH 890
Query: 303 SEPERQRVIQCLEAAVGRRA 322
+E RQ++ L A+ + A
Sbjct: 891 AEGRRQQLEAKLREAIKQGA 910
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + V+ L N I A I++ G +D F+V D+
Sbjct: 825 ITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDM 884
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K E +E L E I G
Sbjct: 885 FGLKFHAEGRRQQLEAKLREAIKQG 909
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+ RT N+ A ++T ++A++ FYV D G
Sbjct: 838 IEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFG 886
>gi|302784674|ref|XP_002974109.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
gi|300158441|gb|EFJ25064.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS----SDGRFFM 76
+TPRV ID+ + P TL+++ R G+L + ++VL D N + +S GR +
Sbjct: 224 DTPRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEI 283
Query: 77 DVFHVTDLNGNKLTD--------ESVISYIEQSL--ETIHYGRSNSFNGLTALELTGTDR 126
D+F +T +G KL D E V+ + L + G + T +EL+G R
Sbjct: 284 DLF-ITQADGRKLVDPEKQKALCERVVRDVANPLWVTVLPRGPDSELFVATPIELSGKGR 342
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIY-VKDCNSGSPIEDSQQI-DRIEAR 183
+L +V L L + +A + H G + IY V +SG + SQ++ + I R
Sbjct: 343 PRVLYDVTLALKMLDVCIFQADIGRHAIGDMQWEIYRVLLIDSG---DFSQRMHELIGER 399
Query: 184 LRNVLKG 190
+RNVL G
Sbjct: 400 VRNVLMG 406
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/301 (17%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
T++ V+ + G+ + +++ + L + + + +DGR+ + VF ++T
Sbjct: 17 PTVITVNCPDKRGLGCDLTRIIFEFGLSLVRGDVQTDGRWCLLVFWAV----PRITTAKP 72
Query: 95 ISYI-------------EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
I + Q + S L L++ DR GLL ++ +L +L+
Sbjct: 73 IQWGLLRKRMIAACPPENQVFVPVDPDFVTSPLKLFLLQVYSADRAGLLHDMSRILWELE 132
Query: 142 CSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG---DNDIRSA 197
+V + K T +G++ + D P ++ + R++N++ G +++ A
Sbjct: 133 LTVHKVKASTCPDGKVIDFFIISDNKLLLP--SRERTLEVCERIKNLMGGLHSKCELKEA 190
Query: 198 KM----TVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ + + +++ + + + + D P VT+ + +++++ +
Sbjct: 191 GPEYGGLMCTPALNLPPSVSELLSSGVNSQ------QNGDTPRVTIDDLLSPAHTLLQIS 244
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTA---GERAYLEFYIRHIDGTPISSEPERQRV 310
C+DR LL+D + L D Y V + ++ + R ++ +I DG + +PE+Q+
Sbjct: 245 CRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEIDLFITQADGRKL-VDPEKQKA 303
Query: 311 I 311
+
Sbjct: 304 L 304
>gi|307105943|gb|EFN54190.1| hypothetical protein CHLNCDRAFT_135650 [Chlorella variabilis]
Length = 513
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 67/387 (17%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN---- 87
CP AT + VD AR +L D L I K IS+DG++ +F V +G
Sbjct: 28 CPDATGLGVDIAR----------MLLDFGLRILKGDISTDGKWCFIIFKVCLSSGVPPRW 77
Query: 88 ---KLTDESVISYIEQSLETIHYGRS-----NSFNGLTALEL-TGTDRVGLLSEVFAVLA 138
K E++ +L+ + RS +F + L G DR G+L + L
Sbjct: 78 QLLKSRLEAICPSGTDTLQQLWRWRSVPKEQQAFLLQASQRLVAGYDRHGMLHSLSHALW 137
Query: 139 DLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIR-- 195
+ +V +A + T NG++A L +V D + P ++ ++ + R++ L D D
Sbjct: 138 ESDTTVFKAHITTSPNGKVADLFWVYDNRNELP--ENHRVLEVCDRVKGALGPDTDCTIT 195
Query: 196 -------SAKMTVSMA--------VTHTERRLHQMMFADRDYERMPVLRHSTDYPV---- 236
+A T S A VT T L +++ + ++ ++ + D
Sbjct: 196 PAPLDSLAAGATTSAALGRKACKDVTSTSN-LRRIVGSKKNLGQIGSQEGAKDTFSERQA 254
Query: 237 ---VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFY 292
V+V N ++S++ ++C+DR LL+D+ +L D++ V + I + ++ +
Sbjct: 255 EVEVSVDNETSPAHSLLTLRCRDRKGLLYDLFRSLKDIDLRVAYGKIEVYEDGMCEVDLF 314
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAVG-------RRASEGVRLELCM--------EDRQG 337
++ +GT I+ Q +++ + AV + A + EL + R
Sbjct: 315 VQDAEGTRITDTELLQELVERVRMAVALPVRIDIKDAYDASCTELTITANIDSGGRGRPR 374
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDE 364
+ DVT+ G+ V A+V ER E
Sbjct: 375 VTFDVTQGLSAAGVGVFMADVYIERPE 401
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+NA+ T+++V R G+L E L+DL+L I A++++ G +DVF+VT
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ +E+ + + L +I
Sbjct: 895 DLLGKQVINETRQATLRSRLRSI 917
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
LT LE++G DR GLL E+ + L+DL + A V T + + YV D I +++
Sbjct: 847 LTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGKQVINETR 906
Query: 176 QIDRIEARLRNVL 188
Q + +RLR++L
Sbjct: 907 QAT-LRSRLRSIL 918
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N +V+ V +DR LL+++ L+D+ + A + T GE+A FY+
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 295 HIDGTPISSEPE----RQRVIQCLEAAVGRRASEGVRL 328
+ G + +E R R+ L+ A + A+E R+
Sbjct: 895 DLLGKQVINETRQATLRSRLRSILDPARPKSATEPARV 932
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LE+ DR GLL ++T + L+++ A V+T ++A+++FYVTD +G ++I
Sbjct: 850 LEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGK----QVINET 905
Query: 388 RQKIGLSNLK 397
RQ S L+
Sbjct: 906 RQATLRSRLR 915
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +V+D + G P ED + + R+E
Sbjct: 745 ADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQD-HDGHPFEDIK-LKRLED 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G R A M D+ +R T+ +T N
Sbjct: 803 MIHKTLSGKVIARDA-----------------MKSRDKMKKREKAFTVPTN---ITFDND 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL D + A I T GE+ FY++ + G
Sbjct: 843 GSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFGLKFF 902
Query: 303 SEPERQRVIQCLEAAV 318
S+ + + + + L A+
Sbjct: 903 SDAKMKSLEKKLREAI 918
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 837 ITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ++ + +E+ L
Sbjct: 897 FGLKFFSDAKMKSLEKKL 914
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TRT +N + + A ++T ++ ++ FYV D G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFG 898
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD G+ + + LA + +VV+A+ +T +G + +++D + G+P D ++ R+
Sbjct: 746 TDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDAD-GNPY-DIARLPRLRQ 803
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R ++ D+ +R R T +T N
Sbjct: 804 MIGKTLKGEIKARE-----------------ELKSRDKVKKREKAFRVPTH---ITFDNE 843
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ +L + + +A I T GE+ FY++ + G
Sbjct: 844 GSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 903
Query: 303 SEPERQRVIQCLEAAVG 319
SE +++ + + L A+
Sbjct: 904 SESKQKTLEKRLRTAIA 920
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 838 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDM 897
Query: 85 NGNKLTDESVISYIEQSLET 104
G K ES +E+ L T
Sbjct: 898 FGLKYYSESKQKTLEKRLRT 917
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +VI+N + T+++V R G+L E L+DL+L I A++++ G +DVF+VT
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ E I L+TI
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQTI 916
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P + + N +V+ V +DR LL+++ L+D+ + A + T GE+A FY+
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G + SE RQR I+
Sbjct: 894 DLTGKQVVSE-VRQRTIR 910
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
LT +E++G DR GLL E+ + L+DL + A V T + + YV D + + +
Sbjct: 846 LTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTDLTGKQVVSEVR 905
Query: 176 QIDRIEARLRNVLKGDND 193
Q I RL+ +L DND
Sbjct: 906 Q-RTIRDRLQTILL-DND 921
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL ++T + L++ A V+T ++A+++FYVTD G +++ V
Sbjct: 849 IEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTDLTGK----QVVSEV 904
Query: 388 RQK 390
RQ+
Sbjct: 905 RQR 907
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIE 172
G + + D GL S + V+A +++ A++ T NG++ ++ V IE
Sbjct: 712 GGYSTYSICTWDIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQVNSPQGFMIIE 771
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+S+ R++ LR VL G IR A + +R + +R R P
Sbjct: 772 ESRW-SRVDEDLRQVLTGK--IRVASLVA--------KRQRPTLLTERPKPRFP------ 814
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V + N Y+V+++ D+ LL+ + TLTD+ + A I+T ++ FY
Sbjct: 815 --SRVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFY 872
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAV 318
++ I G I+S + + + L AV
Sbjct: 873 VKDIFGHKITSVERLEEIREKLRVAV 898
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L LTDL L I A IS+ DVF+V D
Sbjct: 816 RVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKD 875
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G+K+T + I + L
Sbjct: 876 IFGHKITSVERLEEIREKL 894
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+++ D+ GLL +T T + GL + A++ST+ D+ ++FYV D G+ + +E
Sbjct: 830 IDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHKITSVERLEE 889
Query: 387 VRQKI 391
+R+K+
Sbjct: 890 IREKL 894
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ S + L+ + +VV+A+ +T +G + +++D + GSP E ++ + R+
Sbjct: 732 SDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQDAD-GSPYEQNR-LGRLRD 789
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+R L G+ R A ++ + ER T +T N
Sbjct: 790 MIRKTLMGEVKPREAILSKG-KIKKRERAF-------------------TVPTSITFDNE 829
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG---- 298
Y+++ V +DR LL+D+ TL + + A I T GE+ FY++ + G
Sbjct: 830 GSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFGLKFY 889
Query: 299 TPISSEPERQRVIQCLEAAVGRRAS 323
TP + +R+ +EA R A
Sbjct: 890 TPSKQKTLEKRLRAAMEAGAKRIAQ 914
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 824 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDM 883
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 884 FGLKFYTPSKQKTLEKRL 901
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG----NPADPKI 383
+E+ DR GLL D+TRT E + + A ++T ++ ++ FYV D G P+ K
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFGLKFYTPSKQKT 896
Query: 384 IE 385
+E
Sbjct: 897 LE 898
>gi|414589019|tpg|DAA39590.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 295
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D+T L D+ + V ++T G Y+ F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 307 -RQRVIQ-C--------------LEAAVGRR-----ASEGVRLELCMEDRQGLLADVTRT 345
+ R++Q C L AA G + A + L+LC DR GLL DVTR
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 346 FRENGLNVTRAEVSTERD-EALNIFYVTDEMG 376
E L + R +VST D L++F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 47/269 (17%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------DL 84
T+V V + G+ + + + L + K +S+DGR+ VF + DL
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGLL 130
++L ++ +G +++ A L+L DR+GLL
Sbjct: 83 LKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLL 136
Query: 131 SEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLR 185
+V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 137 HDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVLG 194
Query: 186 NVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV--- 236
+ L D+ S + + T + QM E P+
Sbjct: 195 DSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTIIS 254
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
VT+ N +++++ +QC D LL+DV+
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVM 283
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T + L D LLS + A ++V+A+++T +GR +I +K +++
Sbjct: 734 VTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDIILIKRAFDFDE-DET 792
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ R++ + LKG IR A R++ +
Sbjct: 793 KRARRVKEIIEQALKGT--IRLPDEIARHAPPKRTRKIFDVT------------------ 832
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++SV+ V+ DR LL D+ TL+D+ + A I T GE+A FY+R
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVR 892
Query: 295 HIDGTPISSEPERQ-RVIQCLEAAVGRRASEGVR 327
+ G +++ P+RQ R+ L + V + ++ V+
Sbjct: 893 DLIGHKLTN-PQRQTRICHKLLSIVQTQTADIVK 925
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I+N + T ++++V S R G+L + + L+DL+L I A+I++ G +D F+V
Sbjct: 832 TPTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYV 891
Query: 82 TDLNGNKLTD 91
DL G+KLT+
Sbjct: 892 RDLIGHKLTN 901
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL+D+T+T + L++ A ++T ++A++ FYV D +G+
Sbjct: 848 IEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVRDLIGH 897
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 47/311 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT---D 91
T+V V + G+ + +V+ L + K +S+DGR+ V V G + D
Sbjct: 20 PTVVTVSCPDKTGLGCDLCRVVLLFRLSVVKGDMSTDGRWCYIVLWVLPRGGRPVPVPWD 79
Query: 92 ESVISYIEQSLETIHYGRSNSF-------------NGLTALELTGTDRVGLLSEVFAVLA 138
++ +G N++ L L+L DR+GLL +V VL
Sbjct: 80 LLKDRLLQLCPVAPPFGFDNAYLAAAGLQDLAPPPPKLFLLKLCCFDRMGLLHDVTRVLC 139
Query: 139 DLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLRNVL----- 188
+L+ ++ KV T +G + L ++ D ++ S E++Q D++EA L + L
Sbjct: 140 ELELTIRRVKVSTTPDGSVLDLFFITDARELLHTKSRREETQ--DKLEAVLGDSLTCCEI 197
Query: 189 --KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
G++ + + S+ TE+ MF + E P+ VT+ N
Sbjct: 198 DPAGEDMLSCLQSWASLTPAITEQ-----MF---NTEEQPISTRGGTIS-VTMDNSLSSV 248
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
++++ +QC D LL+D++ T+ D + Y F+A+ N R ++ + DG I
Sbjct: 249 HTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNG---RCEIDLFAVQSDGKKIL 305
Query: 303 SEPERQRVIQC 313
+ RQR + C
Sbjct: 306 DQ-HRQRALCC 315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D+T L D+ + V ++T G Y+ ++ G P+ +
Sbjct: 21 TVVTVSCPDKTGLGCDLCRVVLLFRLSVVKGDMSTDGRWCYIVLWVLPRGGRPVPVPWDL 80
Query: 307 -RQRVIQCLEAAV------GRRASEGVR-----------LELCMEDRQGLLADVTRTFRE 348
+ R++Q A A+ G++ L+LC DR GLL DVTR E
Sbjct: 81 LKDRLLQLCPVAPPFGFDNAYLAAAGLQDLAPPPPKLFLLKLCCFDRMGLLHDVTRVLCE 140
Query: 349 NGLNVTRAEVSTERD-EALNIFYVTD 373
L + R +VST D L++F++TD
Sbjct: 141 LELTIRRVKVSTTPDGSVLDLFFITD 166
>gi|147817636|emb|CAN64495.1| hypothetical protein VITISV_004035 [Vitis vinifera]
Length = 465
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 132/311 (42%), Gaps = 44/311 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ N CP T + D R ++ L I + +S+DG++ VF +
Sbjct: 62 PRVLTVN--CPDKTGLGCDLCR----------IILFFGLSIVRVDVSTDGKWCYIVFWII 109
Query: 83 DLNGNKLTDESVIS-YIEQSLETIHYGRSNSFNGLTA--------LELTGTDRVGLLSEV 133
G T S++ + ++ + S+ L L+ DR GLL +V
Sbjct: 110 ---GKSTTRWSLLQDRLSEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDV 166
Query: 134 FAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD- 191
VL +L+ ++ + KV T +GR+ L ++ D + + ++ + L+ VL GD
Sbjct: 167 TEVLCELELTIKKVKVSTTPDGRVMDLFFITD--TRELLHTKKRQEDTHNHLKTVL-GDA 223
Query: 192 ----------NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
++I + T ++ + R + F D +P + + VT+ N
Sbjct: 224 MISCDISMVGSEITACSQTSTLLPSAITREIFGSKFEDEPPSGLPQVSGNIS---VTMDN 280
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTP 300
++++V + C+D LL+D++ TL D + + + T R ++ +I DG
Sbjct: 281 SLSPAHTLVQIVCQDHKGLLYDMMRTLKDYNIKISYGRLTTKPRRNCEVDLFIMQADGKK 340
Query: 301 ISSEPERQRVI 311
+ +P +Q +
Sbjct: 341 V-VDPYKQNAL 350
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER- 307
V+ V C D+T L D+ + + ++T G+ Y+ F+I T S +R
Sbjct: 64 VLTVNCPDKTGLGCDLCRIILFFGLSIVRVDVSTDGKWCYIVFWIIGKSTTRWSLLQDRL 123
Query: 308 -QRVIQCLEAA-------VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
+ C A+ + + L+ C DR+GLL DVT E L + + +VS
Sbjct: 124 SEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDVTEVLCELELTIKKVKVS 183
Query: 360 TERD-EALNIFYVTD 373
T D +++F++TD
Sbjct: 184 TTPDGRVMDLFFITD 198
>gi|384248169|gb|EIE21654.1| hypothetical protein COCSUDRAFT_48206 [Coccomyxa subellipsoidea
C-169]
Length = 544
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 116/303 (38%), Gaps = 52/303 (17%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN---- 87
CP AT + D AR +L D L I +S+DGR+ +F V G
Sbjct: 54 CPDATGLGCDIAR----------LLLDFGLRIMDGDVSTDGRWCFMIFKVKLGAGVPAHW 103
Query: 88 ---KLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
K E++ R + L++T DR G L ++ L + V
Sbjct: 104 PLLKRRLEAICPNSHGDYSLWRNTRRQDYENPFLLQVTSYDRRGFLHDLMHTLWEADVVV 163
Query: 145 VEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM 203
+A + T G++ + ++ D P ++ ++ +I +R L+ R A T+
Sbjct: 164 FKAHITTGPGGKVLDMFWIYDNRCELP--ENHRVLQITELVRECLQQ----RDANCTIMP 217
Query: 204 AVTHT----ERRLHQMMFADRDYERMPVLR-------------------HSTDYPV---- 236
A T A +D LR + +Y
Sbjct: 218 APPETCDLDSTATILQRCACKDATSASPLRKILSSKRKGSSSGSLDVSSEADEYGCPENV 277
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VT+ N +YSVVNV C+DR L++D++ TL D+ V +A I GE A + ++
Sbjct: 278 QVTIDNCTASNYSVVNVVCRDRKGLVYDLMRTLKDIHVRVAYAKIVVRGELAETDLFVEE 337
Query: 296 IDG 298
DG
Sbjct: 338 ADG 340
>gi|238007756|gb|ACR34913.1| unknown [Zea mays]
gi|414589017|tpg|DAA39588.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 428
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D+T L D+ + V ++T G Y+ F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 307 -RQRVIQ-C--------------LEAAVGRR-----ASEGVRLELCMEDRQGLLADVTRT 345
+ R++Q C L AA G + A + L+LC DR GLL DVTR
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 346 FRENGLNVTRAEVSTERDEA-LNIFYVTDEMG 376
E L + R +VST D + L++F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 55/321 (17%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------DL 84
T+V V + G+ + + + L + K +S+DGR+ VF + DL
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGLL 130
++L ++ +G +++ A L+L DR+GLL
Sbjct: 83 LKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLL 136
Query: 131 SEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLR 185
+V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 137 HDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVLG 194
Query: 186 NVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV--- 236
+ L D+ S + + T + QM E P+
Sbjct: 195 DSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTIIS 254
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFY 292
VT+ N +++++ +QC D LL+DV+ + D + Y F+A+ N R ++ +
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNG---RCEIDLF 311
Query: 293 IRHIDGTPISSEPERQRVIQC 313
DG I + RQR + C
Sbjct: 312 AVQSDGKKILDQ-HRQRALCC 331
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G+L + ++++ D N+ I + Y S +GR +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAVQ 314
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 315 S-DGKKILDQ 323
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + L+ + +VV+A+ +T +G ++ +++D + G+P E+S+ + R+
Sbjct: 736 SDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQDMD-GTPFEESR-LPRLRD 793
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+R L G+ R A H+ R F R+ R + +T N
Sbjct: 794 MIRKTLWGEVKPREA--------IHSRLR-----FKKRE-------RAFSVPTSITFDNE 833
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL++ + A I T GE+ FY++ + G
Sbjct: 834 GSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFGLKFF 893
Query: 303 SEPERQRVIQ 312
+ P +Q+ ++
Sbjct: 894 T-PSKQKTLE 902
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 828 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDM 887
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G K S +E L + I G+ +
Sbjct: 888 FGLKFFTPSKQKTLEHRLRDAIEEGKERA 916
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG----NPADPKI 383
+E+ DR GLL D+TRT E+ + + A ++T ++ ++ FYV D G P+ K
Sbjct: 841 IEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFGLKFFTPSKQKT 900
Query: 384 IE 385
+E
Sbjct: 901 LE 902
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 33/180 (18%)
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISS 303
R+ + V + DR ++ D+V ++ V ATINT R + FYI+ G P
Sbjct: 728 RAATEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGK 787
Query: 304 EP--ERQRVIQCL------EAAVGRR------------------------ASEGVRLELC 331
+RQ ++ L E V RR A + +E
Sbjct: 788 HDAVQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEAS 847
Query: 332 MEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
DR GLLAD+ + GL +T A++ + A ++FYVT + D I E+VR +
Sbjct: 848 GRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKDEKLVDEAISESVRNGL 907
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + AT+++ R G+L + VL D L + A I G DVF+V
Sbjct: 828 TPSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYV 887
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFN 114
T + KL DE++ + L + +F+
Sbjct: 888 THKD-EKLVDEAISESVRNGLLAVFSENETAFD 919
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 32/179 (17%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGR-IASLIYVKDCNSGSPI--EDSQQIDRIE 181
DR + +++ A A++ VV A + T R + + Y++D +G P D+ Q +
Sbjct: 739 DRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDA-AGQPYGKHDAVQRQALV 797
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---PVVT 238
LR V G+ +R RR P+ R + P VT
Sbjct: 798 GYLREVATGEVTVR--------------RR-----------PAAPLKRRDAAFRVTPSVT 832
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
+ N +V+ +DR LL D+ L D + A I+ GERA FY+ H D
Sbjct: 833 ISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKD 891
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
++ Y R +S+ T + L D GL S++ V+A +++ A+++T IA I ++
Sbjct: 698 SVVYNRESSY---TEVILVTVDIAGLFSKISGVMAANGVNILGAQIFTQKSGIAVDI-LQ 753
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
G+ +D ++ IE L L+G D+ E+R ++ R
Sbjct: 754 VGRDGNIYDDDRKWATIEKDLIWFLQGRGDVDE----------QVEKRKSSILDLSRQVP 803
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+P P V + N Y+VV+V DR LL+ + +L + + + I+T
Sbjct: 804 TIP--------PRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTK 855
Query: 284 GERAYLEFYIRHIDGTPISSEPER 307
G+RA FY++ I G I +PE+
Sbjct: 856 GDRAGDTFYVQDIFGHKI-VQPEK 878
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV IDN V T+V V + R G+L + L + + I + IS+ G D F+V
Sbjct: 807 PRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYVQ 866
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + + ++L
Sbjct: 867 DIFGHKIVQPEKLDELRETL 886
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + +VV+A+ +T +G + +++D G P E S+ + R+
Sbjct: 758 DHPGIFSRIAGALALVGANVVDARSYTTKDGYVTDAFWIQDAE-GHPFEASR-LPRLTQM 815
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNW 242
+ LKG+ R A RD ++ + + P VT N
Sbjct: 816 IHKTLKGEVVARDA-------------------LKSRD--KIKKRERAFNVPTHVTFDNE 854
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 855 GSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYH 914
Query: 303 SEPERQRVIQCLEAAVGRRASEGV 326
SE ++ + LEA + + EG
Sbjct: 915 SEAKQ----RGLEAKLRKAIVEGA 934
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P V DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 834 DKIKKRERAFNVPTHVTFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K E+ +E L
Sbjct: 894 TYGEQVVDTFYVKDMFGLKYHSEAKQRGLEAKL 926
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV V C D+T L D+ + V ++T G Y+ F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 307 -RQRVIQ-C--------------LEAAVGRR-----ASEGVRLELCMEDRQGLLADVTRT 345
+ R++Q C L AA G + A + L+LC DR GLL DVTR
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 346 FRENGLNVTRAEVSTERD-EALNIFYVTDEMG 376
E L + R +VST D L++F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 55/321 (17%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------DL 84
T+V V + G+ + + + L + K +S+DGR+ VF + DL
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGLL 130
++L ++ +G +++ A L+L DR+GLL
Sbjct: 83 LKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLL 136
Query: 131 SEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLR 185
+V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 137 HDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVLG 194
Query: 186 NVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV--- 236
+ L D+ S + + T + QM E P+
Sbjct: 195 DSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTIIS 254
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFY 292
VT+ N +++++ +QC D LL+DV+ + D + Y F+A+ N R ++ +
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNG---RCEIDLF 311
Query: 293 IRHIDGTPISSEPERQRVIQC 313
DG I + RQR + C
Sbjct: 312 AVQSDGKKILDQ-HRQRALCC 331
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G+L + ++++ D N+ I + Y S +GR +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAVQ 314
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 315 S-DGKKILDQ 323
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR + NA+ ++++++ R G+L E VL+DL+L I A+I++ G +D F+VT
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 83 DLNGNKLTDESVISYIEQSL-ETIHYG 108
DL G+K+ + + I + L ETI G
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENG 897
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V+N +SV+ ++C DR LL +V L+D+ + A I T GE+ FY+
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G+ + + P+R VI+
Sbjct: 871 DLTGSKVDN-PDRLEVIR 887
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ DR GLLSEV +VL+DL + A + T ++ YV D +GS +++
Sbjct: 821 NRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGSKVDN 879
Query: 174 SQQIDRIEARL 184
+++ I L
Sbjct: 880 PDRLEVIRREL 890
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 331 CMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQ 389
C+ DR GLL++VT + L++ A ++T ++ ++ FYVTD G+ D P +E +R+
Sbjct: 830 CL-DRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEVIRR 888
Query: 390 KI 391
++
Sbjct: 889 EL 890
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P + IDNA+ T++++ R G+L E L+ LNL I A++++ G +DVF+V
Sbjct: 919 APDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYV 978
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T + I +++ + G
Sbjct: 979 TDLTGTKITQPDRQATIRRAVMGVFEG 1005
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 97 YIEQSLE-----TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+I Q+L H+ +++ G+T L + D LL+ + A ++V+A+++T
Sbjct: 798 FIRQTLAEGRTVATHF-ETDASRGITELSVYSPDHPRLLAILTGACAAAGGNIVDAQIFT 856
Query: 152 -HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTER 210
+G + I + ++ ++ RI + LKG+ IR A +
Sbjct: 857 TADGFVLDTIVLSRAFDQDE-DELRRAGRIATAIERALKGE--IRIADLV---------- 903
Query: 211 RLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD 270
ADR + R R P +++ N +V+ + DR LL+++ L+
Sbjct: 904 -------ADR-HPRKDRARTFQVAPDLSIDNALSSRETVLEISGLDRPGLLYELTTALSR 955
Query: 271 MEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGV 326
+ + A + T GER FY+ + GT I ++P+RQ I+ A +G EG+
Sbjct: 956 LNLNITSAHVATFGERVVDVFYVTDLTGTKI-TQPDRQATIR--RAVMGVFEGEGI 1008
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LE+ DR GLL ++T LN+T A V+T + +++FYVTD G KI +
Sbjct: 935 LEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDLTGT----KITQPD 990
Query: 388 RQ 389
RQ
Sbjct: 991 RQ 992
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D G+P D ++ R+
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAE-GNPY-DVSRLPRLRQ 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A + D+ +R V + T +T N
Sbjct: 803 MISKTLKGEILARDA-----------------LKSRDKVKKREKVFKVPTH---ITFDNE 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ +L++ + +A I T GE+ FY++ + G
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 902
Query: 303 SEPERQRVIQCLEAAV 318
+E +++ + + L AA+
Sbjct: 903 TESKQKTLEKRLRAAI 918
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 837 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 897 FGLKYYTESKQKTLEKRL 914
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T + D G+ + + LA + +VV+A+ +T +G + + +V+D + G P ++S
Sbjct: 753 VTRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDAD-GKPYDES 811
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+ RLR ++ + S ++ S A ++ D+ +R R T
Sbjct: 812 RL-----PRLRKMI---DKTLSGEVVTSQA----------LVSKDKVKKRDAQFRFPTS- 852
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
++ N Y+++ V +DR LLFD+ L D V A I T G + FY++
Sbjct: 853 --ISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVK 910
Query: 295 HIDGTPISSEPERQRVIQCLEAAV 318
+ G + E +++ + + L AV
Sbjct: 911 DMFGLKLHGEAKQRTIEKRLREAV 934
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN TL++VD+ R G+L + + L D N+ + A I++ G +D F+V D+
Sbjct: 853 ISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDM 912
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G KL E+ IE+ L E + +G
Sbjct: 913 FGLKLHGEAKQRTIEKRLREAVEHG 937
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+++V++ R +L + L + ++++ A+I++ G D F+VT
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TDES + I Q+L
Sbjct: 885 DLTGAKITDESRMDTIRQAL 904
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 30/267 (11%)
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY-----IEQSLETIHYGRSNSFNGLTA 118
K A + GR D + + + + +++ Y I + L +IH + G T
Sbjct: 673 KAALLEKHGRLLPDSYWIAE--PENVISRNIVQYDVAREISEDL-SIHC-EFDEERGATL 728
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ + D GL + + ++++A++ T A Y+ G P + +Q+
Sbjct: 729 VTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFAEERQLA 788
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RIE + + + ++ +A +R L Q D P V
Sbjct: 789 RIEQAIADAIAN-----RGELVPKLA----KRPLKQTRAGAFDVR-----------PRVL 828
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
N A ++V+ V +DR LL + L + + +V A I GERA FY+ + G
Sbjct: 829 FDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDLTG 888
Query: 299 TPISSEPERQRVIQC-LEAAVGRRASE 324
I+ E + Q L+AA R +E
Sbjct: 889 AKITDESRMDTIRQALLDAASDARQAE 915
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D G+P D ++ R+
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAE-GNPY-DVSRLPRLRQ 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A + D+ +R V + T +T N
Sbjct: 803 MISKTLKGEILARDA-----------------LKSRDKVKKREKVFKVPTH---ITFDNE 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ +L++ + +A I T GE+ FY++ + G
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 902
Query: 303 SEPERQRVIQCLEAAV 318
+E +++ + + L AA+
Sbjct: 903 TESKQKTLEKRLRAAI 918
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 837 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 897 FGLKYYTESKQKTLEKRL 914
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPI--EDSQQI 177
+ DR GL +++ ++ L +VV A+V+T G+ + YV+D +G+P E+ + +
Sbjct: 740 IAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDV-TGAPFGCENPRAL 798
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
R+ L KGD + V + R A P V
Sbjct: 799 RRLADALEAAGKGD------ALAVEPRRGSEQTRAAAFAIA----------------PSV 836
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
T+ N A +VV +DR LL + TL D + A I+ GERA FY++ +
Sbjct: 837 TIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTE 896
Query: 298 GTPIS 302
G ++
Sbjct: 897 GGKVT 901
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V IDN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 833 APSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
Query: 82 TDLNGNKLTD 91
G K+TD
Sbjct: 893 QTTEGGKVTD 902
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 303 SEPERQRVIQCLEAAVG--RRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
+E R+ IQ AA G R S + + +DR+GL AD+ G NV A V T
Sbjct: 711 AELARRAAIQGGAAAEGQVRPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFT 770
Query: 361 ERD-EALNIFYVTDEMGNP 378
R +AL++FYV D G P
Sbjct: 771 SRQGQALDVFYVQDVTGAP 789
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 34/167 (20%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER- 307
V + KDR L D+ ++ + V A + T+ + L+ FY++ + G P E R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 308 -QRVIQCLEAAVG--------RRASEGVR----------------------LELCMEDRQ 336
+R+ LEAA RR SE R +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV-TDEMGNPADPK 382
GLL + +T ++ L++ A + + A++ FYV T E G D +
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKVTDTR 904
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++NA T+V+V R G+L L+ LNL I A++++ G +DVF+VT
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + S I ++L + G
Sbjct: 930 DLMGAKITGAARQSTIRRALVAVFEG 955
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
T+ GR G+T L + D LLS + A ++V+A +
Sbjct: 766 TLEAGR-----GITTLTVVAPDHPKLLSIIAGACAAAGANIVDAHI-------------- 806
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSA---KMTVSMAVTHTERRLHQMMFADR 220
S D +D I R R + ++++R A + V A+T E RL ++M
Sbjct: 807 -----STTTDGLALDTIALR-RAFDRDEDELRRAGRIQEAVEQALT-GEVRLPEVM---- 855
Query: 221 DYERMPVLRHS-TDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
++P R + T P VTV N W++R ++VV V DR LLF + TL+ + + A
Sbjct: 856 -ARKIPKGRRTFTVEPEVTVNNAWSNR-HTVVEVSGLDRPGLLFALTNTLSRLNLNIASA 913
Query: 279 TINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEA 316
+ T GERA FY+ + G I+ + + + L A
Sbjct: 914 HVATFGERAVDVFYVTDLMGAKITGAARQSTIRRALVA 951
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL +T T LN+ A V+T + A+++FYVTD MG KI A
Sbjct: 885 VEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMG----AKITGAA 940
Query: 388 RQKIGLSNLKVKELPMIYHQKGESEE 413
RQ S ++ + L ++ E EE
Sbjct: 941 RQ----STIR-RALVAVFEGPAEDEE 961
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 719 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 774
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 775 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 822
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 823 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 874
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 875 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 825 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 885 DLVGQKISGDSKRANITARMKAV 907
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARHRKKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARHRKKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P D ++ R++
Sbjct: 765 DHPGIFARIVGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPF-DPMRLHRLKQM 822
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A + D+ +R + T +T N
Sbjct: 823 IEKTLKGEVIARDA-----------------LKSRDKIKKRERAFKVPTH---ITFDNEG 862
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G S
Sbjct: 863 SEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDMFGLKYYS 922
Query: 304 EPERQRVIQCLEAAVGRRAS 323
E +++ + + L A+ A
Sbjct: 923 ESKQRMLDRKLREAIAEGAK 942
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 856 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDM 915
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K ES +++ L E I G
Sbjct: 916 FGLKYYSESKQRMLDRKLREAIAEG 940
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P E S+ + R+ +
Sbjct: 712 DHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDAD-GHPFEASR-LPRLRSM 769
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L+G+ R A + D+ +R R T +T N
Sbjct: 770 IEKTLRGEVIARDA-----------------LKSRDKIKKRERAFRVPTH---ITFDNDG 809
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G S
Sbjct: 810 SDIYTIIEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFGLKYHS 869
Query: 304 EPERQRVIQCLEAAV 318
++Q + + L A+
Sbjct: 870 ASKQQSLEKKLREAI 884
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 803 ITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDM 862
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 863 FGLKYHSASKQQSLEKKL 880
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G ++ +A RR ++
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG-----RKRLPEVIATRARNRRKNKAFV------- 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V+V R G+L E L+ LNL I A++++ G +DVF+VT
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + S I ++L + G
Sbjct: 945 DLMGAKITGAARQSTIRRALIGVFEG 970
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A++ S D
Sbjct: 787 GITVLTVLAPDHPKLLSVIAGACAAAGANIVDAQI-------------------STTTDG 827
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKM--TVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+D I R D + R+ ++ + A+T E RL ++M +++P R +
Sbjct: 828 LALDTIAVRRAFDRDEDEERRAGRIRDAIEKALT-GEVRLPEVM-----AKKLPKARRTF 881
Query: 233 DY-PVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P VTV N W++R ++VV V DR LLF++ TL+ + + A + T GERA
Sbjct: 882 SVEPEVTVNNTWSNR-HTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDV 940
Query: 291 FYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I+ RQ I+
Sbjct: 941 FYVTDLMGAKITGA-ARQSTIR 961
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
DR GLL ++T T LN+ A V+T + A+++FYVTD MG KI A RQ
Sbjct: 906 DRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGA----KITGAARQ 957
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P +VIDN+ AT+++V R G+L + +++LNL I A+I + G +D F+V
Sbjct: 792 APDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYV 851
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G K+ S + I++ L
Sbjct: 852 TDLTGGKILSASRQATIKRQL 872
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 111 NSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
NSF N T +E++G DRVGLL ++ +++L ++ A + T R YV D G
Sbjct: 799 NSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGGK 858
Query: 170 PIEDSQQ 176
+ S+Q
Sbjct: 859 ILSASRQ 865
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P + + N +V+ V DR LLFD+ ++++ + A I T GERA FY+
Sbjct: 793 PDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVT 852
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G I S RQ I+
Sbjct: 853 DLTGGKILS-ASRQATIK 869
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+T LN+ A + T + A++ FYVTD G KI+ A
Sbjct: 808 IEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGG----KILSAS 863
Query: 388 RQ 389
RQ
Sbjct: 864 RQ 865
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+V+V R G+L E L+ LNL I A++++ G +DVF+VT
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA 118
DL G ++T + + I+++L + G +N A
Sbjct: 903 DLLGAQITSPTRQAAIKRALIALFAGPNNESKAAKA 938
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VT+ N Y++V V DR LL+++ TL+ + + A + T GER FY+
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G I+S P RQ I+
Sbjct: 903 DLLGAQITS-PTRQAAIK 919
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T T + LN+ A V+T + +++FYVTD +G
Sbjct: 858 VEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDLLG 906
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + ++A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I N + ++V+V R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 83 DLNGNKLTDESVISYIEQS-LETIHYGRSNSFNGLT 117
DL G K+ + I ++ L+T+ G G T
Sbjct: 892 DLTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 36/235 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT--HNGRIASLIYVKDCN 166
+ ++F +T + + D LLS + + ++V+A+++T H + +++ ++ +
Sbjct: 726 KPHTFEAVTEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFD 785
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
+ ++ ++ +RI + +VL G + L +M+ E+
Sbjct: 786 FDA--DERRRAERIGKLIEDVLSGKS------------------YLPEMI------EKRA 819
Query: 227 VLRHSTD----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
R T P V + N +SVV V+ DR LL ++ TL+D+ + A I T
Sbjct: 820 KPRRGTKAFRVVPRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITT 879
Query: 283 AGERAYLEFYIRHIDGTPISS----EPERQRVIQCLEAAVGRRASEGVRLELCME 333
GE+ FY+ + G I S E R+ ++Q LE+ V R A + + E
Sbjct: 880 FGEKVIDTFYVTDLTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKTKARVAAE 934
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLL+++T T + L++ A ++T ++ ++ FYVTD G P +E +R+ +
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLETIRKTL 911
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VV+DN++ T+++V R G+L E ++ LNL I A+I + G +D F+V
Sbjct: 836 APEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYV 895
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ + I++ L + G
Sbjct: 896 TDLTGAKIASPQRQAAIKRQLLDVFGG 922
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V N Y+V+ V DR LLF++ ++ + + A I T GERA FY+
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G I+S P+RQ I+
Sbjct: 897 DLTGAKIAS-PQRQAAIK 913
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E++G DR GLL E+ ++ L ++ A + T R YV D +G+ I
Sbjct: 847 NVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDL-TGAKIAS 905
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
Q+ I+ +L +V G R AK + A
Sbjct: 906 PQRQAAIKRQLLDVFGGPG-ARGAKTPAAAA 935
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I NA+ ++++V+ R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + I+ I L
Sbjct: 894 DLTGQKIDSPARIATIRNRL 913
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTF 882
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRAS 323
GE+ FY+ + G I S R R+I LE A R
Sbjct: 883 GEKVIDTFYVTDLTGQKIDSPARIATIRNRLIATLEGAAPERGG 926
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQKI 391
DR GLL+++TRT + L++ A ++T ++ ++ FYVTD G D P I +R ++
Sbjct: 855 DRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R+++F+ +T + L D LLS V A ++ +A+V+T +GR I + N
Sbjct: 728 RTHAFHAITEITLLSPDHPRLLSIVTGACAAAGANIADAQVFTTSDGRALDTILI---NR 784
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
P +D ++ R ++ R + D+ + K + + R +
Sbjct: 785 ELP-DDEDELRRAKSIGRMI----EDVLAGKAHIPEVIARKNRGKRKT------------ 827
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ T P VT+ N ++V+ ++C DR LL ++ L+D+ + A I T GE+
Sbjct: 828 -KPFTVRPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKV 886
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
FY+R + G I++E + ++ L+A + + E
Sbjct: 887 VDTFYVRDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I NA+ T+++++ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ + I L+ +
Sbjct: 894 DLVGMKITNENRQTNIVARLKAV 916
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI SN F T +EL DR GLLSE+ +VL+DL + A + T ++ YV+
Sbjct: 837 TISNALSNKF---TVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERR 211
D G I + + I ARL+ VL ++D +M M H R
Sbjct: 894 DL-VGMKITNENRQTNIVARLKAVLAKEDDELRDQMPPGMIAPHGSTR 940
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQ 336
A I T GE+ FY+ + G ++++ R+AS RL+ M +++
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTND--------------NRQASIATRLKAVMSEQE 914
Query: 337 GLLAD 341
L D
Sbjct: 915 DELRD 919
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I L+ +
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAV 909
>gi|387814878|ref|YP_005430365.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339895|emb|CCG95942.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 881
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN-TAGERAYLEFYIRHIDGTPISSE 304
YS + + KDR L L + + A IN T G + + + G P+ +
Sbjct: 695 GYSQIIIYMKDRVALFAATTAVLEQLNLNIVDARINSTEGPYSISSYVVLDDKGQPLGID 754
Query: 305 PERQ-----RVIQCLEAA------VGRRASEGVR--------------------LELCME 333
P R+ R+I+ L+ + RR ++ +EL
Sbjct: 755 PARKERVRKRLIEELDDPEDYPDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMELITP 814
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKI 391
DR GLLA + + E+ + +T A+++T + ++F++TDE G+P DP + +A++Q +
Sbjct: 815 DRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGDPLRDPGVCQALQQDL 873
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 227 VLRHSTDYPVVTVQNW--ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
LR TD PV Q+W A + + + ++ T D + D EY + +T++ A
Sbjct: 609 ALRRGTDNPV-DRQSWIRATQEEAREILHAQNMTDEQIDQIWNTVDDEYFLQDSTVDIAW 667
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
+ A + IRH D P+ +I+ S+ + + M+DR L A T
Sbjct: 668 QTAAI---IRHGDN------PDPLVLIRDTRGGPTDGYSQII---IYMKDRVALFAATTA 715
Query: 345 TFRENGLNVTRAEV-STERDEALNIFYVTDEMGNP--ADPKIIEAVRQKIGLSNLKVKEL 401
+ LN+ A + STE +++ + V D+ G P DP E VR+++ ++
Sbjct: 716 VLEQLNLNIVDARINSTEGPYSISSYVVLDDKGQPLGIDPARKERVRKRLIEELDDPEDY 775
Query: 402 PMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNL 437
P I H++ + + V S ++ +R + L
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEL 811
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 25/195 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R +G + + + DRV L + AVL L ++V+A++ + G + YV + G
Sbjct: 689 RGGPTDGYSQIIIYMKDRVALFAATTAVLEQLNLNIVDARINSTEGPYSISSYVVLDDKG 748
Query: 169 SPIE-DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP- 226
P+ D + +R+ RL L D + D + R P
Sbjct: 749 QPLGIDPARKERVRKRLIEELDDPED-----------------------YPDIIHRRTPR 785
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
L+H VT N +V+ + DR LL + L + + +A I T GER
Sbjct: 786 QLKHFAFPTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGER 845
Query: 287 AYLEFYIRHIDGTPI 301
F+I G P+
Sbjct: 846 VEDVFFITDEQGDPL 860
>gi|326386427|ref|ZP_08208050.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209088|gb|EGD59882.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 916
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 23/211 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + + ++++A++ T +A ++ G P+ +
Sbjct: 724 GATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRAGVALDNFLVQDPLGRPLNEE 783
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
QI R++ + + L + Q A R R P +
Sbjct: 784 NQIKRLKVAIADALANKVKL-------------------QPQLAARPLAR-PRAEAFEIH 823
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P+V N A ++V+ V DR LL + L + +V+ A I T GERA FY+
Sbjct: 824 PIVIFDNKASDRFTVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVT 883
Query: 295 HIDGTPISSEPERQRVIQ--CLEAAVGRRAS 323
I G I+SE R R I+ +E A RR+
Sbjct: 884 DILGEKITSE-SRLRSIERRLIEGAQNRRSK 913
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ DN T+++V + R +L + L + L++ A+I++ G +D F+VT
Sbjct: 824 PIVIFDNKASDRFTVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T ES + IE+ L
Sbjct: 884 DILGEKITSESRLRSIERRL 903
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R ++ +T + + TD GL S + +A +VV+A+++T NG ++D
Sbjct: 746 RIDAARAVTEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQD--- 802
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMP 226
ED DR + R AK+ V+ ER L + D+ E R P
Sbjct: 803 ----EDRLAFDRPD-------------RIAKL-----VSAIERALSGALRVDKALEARKP 840
Query: 227 VLRHSTDY----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
L T P V + N A +++VV V +D +L+ + L + + A+I+T
Sbjct: 841 TLGGRTRALKIPPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASIST 900
Query: 283 AGERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRAS 323
GER FY++ + G + S+ + R+ +++ L AA ++A+
Sbjct: 901 YGERFVDVFYLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+V+V+ G+L + L + + I A IS+ G F+DVF++
Sbjct: 853 PRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYLK 912
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ +S + I ++L
Sbjct: 913 DVFGLKVDSKSKLEDIRRAL 932
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + ++ ++++A++ T +A ++ G P ++S
Sbjct: 734 GATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGRPFDES 793
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q+ R++ + + L R + MA T R A
Sbjct: 794 AQLSRLKQAIEDALAN----RGKMIDRLMAKPLTRPRAEAFAIA---------------- 833
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ + +DR LL + L + + A + T GERA FY+
Sbjct: 834 PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 893
Query: 295 HIDGTPISSEPERQRVIQ--CLEAAVGRRASEGV 326
+ G I++ P R + I+ L AA G R ++
Sbjct: 894 DLTGDKIAA-PSRLKTIERRLLGAAAGERMTDAA 926
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T++++++ R +L + L + I A++++ G +D F++
Sbjct: 833 APNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 892
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+K+ S + IE+ L
Sbjct: 893 TDLTGDKIAAPSRLKTIERRL 913
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I NA+ ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + I+ I L
Sbjct: 894 DLTGQKIDNPARIATIRNRL 913
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRASEG 325
GE+ FY+ + G I + R R+I LE R +
Sbjct: 883 GEKVIDTFYVTDLTGQKIDNPARIATIRNRLIATLEGVALERGGKA 928
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQKI 391
DR GLL+++T T + L++ A ++T ++ ++ FYVTD G D P I +R ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
G+T L + D LLS + A ++V+A+V+T +A V +
Sbjct: 737 LRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSREFDFDED 796
Query: 173 DSQQIDRIEARLRNVLKGD---NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+ ++ RI + N L G+ D+ +A++ + A T +
Sbjct: 797 ELRRASRIAFAVENALAGEITLTDMVAARVGSAGARQKTFKV------------------ 838
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+P VT+ N ++VV V DR LLFD+ +++++ + A I T GE+A
Sbjct: 839 ----HPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAAD 894
Query: 290 EFYIRHIDGT----PISSEPERQRVIQCLEAAVGRRASEGVR 327
FY+ +GT P+ E R++++ + G A + R
Sbjct: 895 VFYVSDNEGTKITEPVRQEAVRRKILHIFDQPKGESAPKSAR 936
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN++ T+V+V R G+L + +++L+L I A+I++ G DVF+V+
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 83 DLNGNKLTD 91
D G K+T+
Sbjct: 900 DNEGTKITE 908
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+T E LN+ A ++T ++A ++FYV+D G KI E V
Sbjct: 855 VEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNEGT----KITEPV 910
Query: 388 RQKIGLSNLKVKELPMIYHQKGESEEQTV 416
RQ+ ++ K L + KGES ++
Sbjct: 911 RQE----AVRRKILHIFDQPKGESAPKSA 935
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
E+ FY+ + G IS + +R + + A + E
Sbjct: 899 EKVIDTFYVTDLVGQKISGDSKRANITARMRAVMAEEEDE 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDES 93
DL G K++ +S
Sbjct: 909 DLVGQKISGDS 919
>gi|363807308|ref|NP_001242111.1| uncharacterized protein LOC100787003 [Glycine max]
gi|255636202|gb|ACU18442.1| unknown [Glycine max]
Length = 419
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 174/402 (43%), Gaps = 50/402 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF----HVTDLNGNKLT 90
+V V+ + G+ + +++ + L I +A IS+DGR+ V+ H LN + +
Sbjct: 20 PCIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCYIVYWVLAHPASLNVDWES 79
Query: 91 DES-VISYIEQSLETIHYGRSNSFNGLTALELTG---TDRVGLLSEVFAVLADLQCSVVE 146
++ ++S L + H+ + ++ + L+ D+ GLL ++ +L +L+ +
Sbjct: 80 LKTRLLSACPSCLLSYHFNQHSTSPSPPPIYLSKVWCVDQKGLLHDINEILCNLELIIQR 139
Query: 147 AKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
K T +GR+ + ++ D + ++ D + L + L G+ I S
Sbjct: 140 VKAMPTPDGRVLDMFFITD--GMELLHTKKRQDYVCEYLMDAL-GERCISSELQLAGPEY 196
Query: 206 THTE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQC 254
H + + +F+ +++ + S D P VTV N ++++ +QC
Sbjct: 197 GHLQGFSSLPPAFAEELFSSELLDKLSLHPLSQDMTTLKTPTVTVDNSLSPVHTLLQIQC 256
Query: 255 KDRTKLLFDVVCTLTDMEYVVFHATINTA--GERAYLEFYIRHIDGTPISSEPERQRVI- 311
D+ L +D++ D + V +++ G R ++ +++H DG I +PE Q+ +
Sbjct: 257 VDQKGLCYDIMRISKDSDIKVAFGRFSSSVKGFRN-IDLFVQHNDGKKI-IDPESQKTLC 314
Query: 312 QCLE--------AAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
CL+ + R + L EL + R + DVT T + + + AEV
Sbjct: 315 SCLKEEMLHPLRVTIVNRGPDTELLVANPVELSGKGRPRVFYDVTLTLKALRVGIFSAEV 374
Query: 359 ----STERDEALNIFYVTDEMGNP-----ADPKIIEAVRQKI 391
+ ER ++ F + + P A +I++ VR+ +
Sbjct: 375 VRHSTQERQWEVHRFLLEESRDFPLTRSQARTQIVDKVRRTL 416
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P E S+ + R+ +
Sbjct: 726 DHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDAD-GHPFEASR-LPRLRSM 783
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L G+ R A + D+ +R R T +T N
Sbjct: 784 IEKTLHGEVIARDA-----------------LKSRDKIKKRERAFRVPTH---ITFDNDG 823
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G S
Sbjct: 824 SDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYHS 883
Query: 304 EPERQRVIQCLEAAV 318
++Q + + L A+
Sbjct: 884 AAKQQSLEKKLREAI 898
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 817 ITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDM 876
Query: 85 NGNKLTDESVISYIEQSL 102
G K + +E+ L
Sbjct: 877 FGLKYHSAAKQQSLEKKL 894
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNS 112
DL G+K+++ + I + L + G + S
Sbjct: 894 DLVGHKISNATRQGNIRRKLLGVLSGENGS 923
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDN 192
+ + I +L VL G+N
Sbjct: 903 ATRQGNIRRKLLGVLSGEN 921
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 720 ERALATM--AKPHTFEAVTEITVLAPDHPRLLSIITGACAAAGANIVDAQIFTTGDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G A + +A +R +
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSG-----KAHLPDVLAKRTKPKRAAKAF 830
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
+ P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 831 KVE---------------PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISS 303
A I T GE+ FY+ + G IS+
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISN 902
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNS 112
DL G+K+++ + I + L + G + S
Sbjct: 894 DLVGHKISNATRQGNIRRKLLGVLSGENGS 923
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDN 192
+ + I +L VL G+N
Sbjct: 903 ATRQGNIRRKLLGVLSGEN 921
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 720 ERALATM--AKPHTFEAVTEITVLAPDHPRLLSIITGACAAAGANIVDAQIFTTGDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G A + +A +R +
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSG-----KAHLPDVLAKRTKPKRAAKAF 830
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
+ P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 831 KVE---------------PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISS 303
A I T GE+ FY+ + G IS+
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISN 902
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +VV+A+ +T +G ++ +++D + G+P ED + I R+
Sbjct: 715 DHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQDAD-GAPYEDVR-IPRLRET 772
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+R L G+ R A + D+ +R + T +T N
Sbjct: 773 IRKTLTGEVVAREAVKS-----------------RDKYKKRERAFKVPTH---ITFDNEG 812
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
++++ V +DR LL+D+ L + A I T GE+ FY++ + G + S
Sbjct: 813 SEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYVKDMFGLKLHS 872
Query: 304 EPERQRVIQCLEAAV 318
+ +R + + L A+
Sbjct: 873 KTKRDLIEKKLRLAM 887
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+Y+K P + DN T+++VD+ R +L + +VL N+ I A I+
Sbjct: 791 DKYKKRERAFKVPTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIA 850
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G KL ++ IE+ L
Sbjct: 851 TYGEQVVDTFYVKDMFGLKLHSKTKRDLIEKKL 883
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I NA+ T+++V+ R G+L E VL+DL+L I A I++ G +D F+VT
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDES 93
DL G K+T+E+
Sbjct: 887 DLVGQKVTNEN 897
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+ FY+
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 295 HIDGTPISSE 304
+ G +++E
Sbjct: 887 DLVGQKVTNE 896
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TD G+ S + LA + +VV+A+ +T A+ ++ N G+P E ++ + R+
Sbjct: 757 TDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQAR-LPRLRQM 815
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ +L+G+ R A + D+ +R R T ++ N
Sbjct: 816 IDKILRGEMGARQA-----------------LDSRDKIKKRESKFRVPTS---ISFDNEG 855
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
++++ V +DR LL+D+ L + A I T G + FY++ + G S
Sbjct: 856 SEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFGMKFHS 915
Query: 304 EPERQRVIQCLEAAVGRRA 322
E +R+ + + L A+ + A
Sbjct: 916 ESKRRTLEKKLREAIDQGA 934
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 9 CLDEYEKLVIRMNTPRV----VIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK 64
LD +K+ R + RV DN T+++VD+ R G+L + +VL N+ I
Sbjct: 829 ALDSRDKIKKRESKFRVPTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIA 888
Query: 65 KAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYG 108
A I++ G +DVF+V D+ G K ES +E+ L E I G
Sbjct: 889 TAQIATYGAQVVDVFYVKDMFGMKFHSESKRRTLEKKLREAIDQG 933
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TR N +++ A+++T + +++FYV D G
Sbjct: 862 IEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFG 910
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 18 IRMNTP----RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
R N P +V IDN T+V+V + R G+L +VL ++N +++A I+++G
Sbjct: 781 FRRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGN 840
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+D F++TD+ K+TD ++ IE+ +
Sbjct: 841 RVIDSFYITDMEYRKITDAKLLKEIEEKI 869
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I+N + T+++V R G+L E VL+DL+L I A++++ G +DVF+VT
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ E I L+++
Sbjct: 894 DLVGKQILSEVRQRAIRDRLQSV 916
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N +V+ V +DR LL+++ L+D+ + A + T GE+A FY+
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G I SE RQR I+
Sbjct: 894 DLVGKQILSE-VRQRAIR 910
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL ++T + L++ A V+T ++A+++FYVTD +G +I+ V
Sbjct: 849 IEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK----QILSEV 904
Query: 388 RQK 390
RQ+
Sbjct: 905 RQR 907
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 110 SNSFNG-LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N +G LT +E++G DR GLL E+ +VL+DL + A V T + + YV D
Sbjct: 839 NNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK 898
Query: 169 SPIEDSQQIDRIEARLRNVL 188
+ + +Q I RL++V+
Sbjct: 899 QILSEVRQ-RAIRDRLQSVM 917
>gi|120555461|ref|YP_959812.1| PII uridylyl-transferase [Marinobacter aquaeolei VT8]
gi|120325310|gb|ABM19625.1| metal dependent phosphohydrolase [Marinobacter aquaeolei VT8]
Length = 881
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN-TAGERAYLEFYIRHIDGTPISSE 304
YS + + KDR L L + + A IN T G + + + G P+ +
Sbjct: 695 GYSQIIIYMKDRVALFAATTAVLEQLNLNIVDARINSTEGPYSISSYVVLDDKGQPLGID 754
Query: 305 PERQ-----RVIQCLEAA------VGRRASEGVR--------------------LELCME 333
P R+ R+I+ L+ + RR ++ +EL
Sbjct: 755 PARKERVRKRLIEELDDPEDYPDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMELITP 814
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKI 391
DR GLLA + + E+ + +T A+++T + ++F++TDE G P DP + +A++Q +
Sbjct: 815 DRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGEPLRDPGVCQALQQDL 873
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 227 VLRHSTDYPVVTVQNW--ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
LR TD PV Q+W A + + + ++ T D + D EY + +T++ A
Sbjct: 609 ALRRGTDNPV-DRQSWIRATQEEAREILHAQNMTDEQIDQIWNTVDDEYFLQDSTVDIAW 667
Query: 285 ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTR 344
+ A + IRH D P+ +I+ S+ + + M+DR L A T
Sbjct: 668 QTAAI---IRHGDN------PDPLVLIRDTRGGPTDGYSQII---IYMKDRVALFAATTA 715
Query: 345 TFRENGLNVTRAEV-STERDEALNIFYVTDEMGNP--ADPKIIEAVRQKIGLSNLKVKEL 401
+ LN+ A + STE +++ + V D+ G P DP E VR+++ ++
Sbjct: 716 VLEQLNLNIVDARINSTEGPYSISSYVVLDDKGQPLGIDPARKERVRKRLIEELDDPEDY 775
Query: 402 PMIYHQKGESEEQTVGVGGAVLLSLGSLVRRNLYNL 437
P I H++ + + V S ++ +R + L
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEL 811
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 25/195 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R +G + + + DRV L + AVL L ++V+A++ + G + YV + G
Sbjct: 689 RGGPTDGYSQIIIYMKDRVALFAATTAVLEQLNLNIVDARINSTEGPYSISSYVVLDDKG 748
Query: 169 SPIE-DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP- 226
P+ D + +R+ RL L D + D + R P
Sbjct: 749 QPLGIDPARKERVRKRLIEELDDPED-----------------------YPDIIHRRTPR 785
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
L+H VT N +V+ + DR LL + L + + +A I T GER
Sbjct: 786 QLKHFAFPTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGER 845
Query: 287 AYLEFYIRHIDGTPI 301
F+I G P+
Sbjct: 846 VEDVFFITDEQGEPL 860
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +Q ++ +A+ +T +G + +V+D G P E + ++ R+
Sbjct: 760 DHPGIFSRMCGALALVQANIKDARTFTSKDGYACAAFWVQD-QDGHPYE-TDRLPRLRDM 817
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQN 241
+ LKG+ + A F DRD +R + T +T N
Sbjct: 818 IGKTLKGEVVAKEA-------------------FRDRDKLKKREAAFKVPTS---ITFDN 855
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL+D+ TL + A I T GE+ FY++ + G
Sbjct: 856 DGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKF 915
Query: 302 SSEPERQRVIQCLEAAV 318
SE R+ + L A+
Sbjct: 916 RSESRRRALEAKLRDAI 932
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 851 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDM 910
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E L
Sbjct: 911 FGLKFRSESRRRALEAKL 928
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 149/347 (42%), Gaps = 26/347 (7%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDE 92
T++ V+ + G+ + +++ +L I +A +S+DG++ VF V + L +
Sbjct: 20 TTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSLLKK 79
Query: 93 SVISYIE--QSLETIHYGRSNSFN----GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+I+ S Y S+ N + L+ DR GLL +V VL +L+ ++ +
Sbjct: 80 RLIAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTEVLCELELTIKK 139
Query: 147 AKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +G++ L ++ D E + D IE +L VL+ ++ V
Sbjct: 140 VKVSTTPDGKVLDLFFITDTRELLHTEKRKD-DTIE-KLTTVLEDFFTTIDIEL-VGPET 196
Query: 206 THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
T + + A D + ++D + + N ++++V + C+D LL+D++
Sbjct: 197 TAFSQPSSSLPNAITDVFDLQSGTSTSDSVSIVMDNTLSPAHTLVQIMCQDHKGLLYDIM 256
Query: 266 CTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQ--------RVIQCLEA 316
TL D + + + + ++ +I +DG I +++ +++ L
Sbjct: 257 RTLKDFNIQISYGRFSKKPRGKCEIDLFIMQVDGKKIVDPSKKESLSSRLKTELLRPLRV 316
Query: 317 AVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
AV R + L EL + R + D+T + GL + AEV
Sbjct: 317 AVVSRGPDTQLLVANPVELSGKGRPLVFYDITLALKMLGLCIFSAEV 363
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+++ V C D+T L D+ + + A ++T G+ Y+ F++ + T S +R
Sbjct: 21 TIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSLLKKR 80
Query: 308 QRVIQC--LEAAVG----------RRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+ C +A G ++ + L+ C +DR+GLL DVT E L + +
Sbjct: 81 L-IAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTEVLCELELTIKK 139
Query: 356 AEVSTERD-EALNIFYVTD 373
+VST D + L++F++TD
Sbjct: 140 VKVSTTPDGKVLDLFFITD 158
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVFHVT 82
+V+DN + P TLV++ G+L + ++ L D N+ I S G+ +D+F +
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 83 DLNGNKLTDESVISYIEQSLET----------IHYGRSNSFNGLTALELTGTDRVGLLSE 132
++G K+ D S + L+T + G +EL+G R + +
Sbjct: 287 QVDGKKIVDPSKKESLSSRLKTELLRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFYD 346
Query: 133 VFAVLADLQCSVVEAKVWTH 152
+ L L + A+V H
Sbjct: 347 ITLALKMLGLCIFSAEVGRH 366
>gi|224054817|ref|XP_002298369.1| predicted protein [Populus trichocarpa]
gi|222845627|gb|EEE83174.1| predicted protein [Populus trichocarpa]
Length = 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 55/364 (15%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL----TDE 92
++ V+ + G+ + V+ D L I K +S+DG++ V V + + +
Sbjct: 22 VITVNCPDKTGLACDIFHVILDYGLYITKGDVSTDGKWCYIVLWVVPHSRSIIRWTHLKN 81
Query: 93 SVISYIEQSLETIHYGRSNSFN-GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
++S + ++ + S + + L+ DR GLL +V VL +L+ ++ KV T
Sbjct: 82 RLLSVCPSCSVSFYWNQQQSKSCPVYLLKFFSLDRKGLLHDVNQVLCELELTIQRVKVTT 141
Query: 152 -HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIR--------------- 195
+GR+ L +V D + Q+ D +L VL G++ I
Sbjct: 142 TPDGRVLDLFFVTD--KLELLHTKQRQDETCEQLHAVL-GESCISCELRLAGPEYECLQG 198
Query: 196 --SAKMTVSMAVTHTE---RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
S ++ + H E + +H + + M + R TD V + N +++++
Sbjct: 199 MSSLSPVIADELFHCEISDKEIHSRALSP---DMMKLKR--TD---VMIDNSLSPAHTLL 250
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHA--TINTAGERAYLEFYIRHIDGTPISSEPERQ 308
V C D LL+DV+ TL D + + ++ T G R L+ +I+ DG I +PE+Q
Sbjct: 251 QVHCVDHKGLLYDVMRTLKDCNIQIAYGRFSLVTNGHRD-LDLFIQQKDGKKI-VDPEKQ 308
Query: 309 ---------RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVT 354
++ L + R + L EL + R + D+T + G+ +
Sbjct: 309 SALCFRLKVEMLHPLRVVIANRGPDTELLVANPVELSGKGRPRVFYDITHALKALGICIF 368
Query: 355 RAEV 358
AE+
Sbjct: 369 SAEI 372
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
V+ V C D+T L D+ + D + ++T G+ Y+ ++ + I +
Sbjct: 22 VITVNCPDKTGLACDIFHVILDYGLYITKGDVSTDGKWCYIVLWVVPHSRSIIRWTHLKN 81
Query: 309 RVIQ-CLEAAVG-------RRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
R++ C +V ++ L+ DR+GLL DV + E L + R +V+T
Sbjct: 82 RLLSVCPSCSVSFYWNQQQSKSCPVYLLKFFSLDRKGLLHDVNQVLCELELTIQRVKVTT 141
Query: 361 ERD-EALNIFYVTDEM 375
D L++F+VTD++
Sbjct: 142 TPDGRVLDLFFVTDKL 157
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKD--C 165
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFP 802
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
N + + I R+ + +VL G K + T + R F +
Sbjct: 803 NDEDELRRAGTIGRM---IEDVLSG------RKRLPDVIATRAKNRKKSKAFI------I 847
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE
Sbjct: 848 P--------PSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGE 899
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ FY+ + G IS + +R + ++A + E
Sbjct: 900 KVIDTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDE 938
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V+V R G+L E L+ LNL I A++++ G +DVF++T
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + I+ I+++L
Sbjct: 899 DLMGARITSPTRIATIKRAL 918
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +A S + +D + G
Sbjct: 739 GVTVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTDGLALDTISVSREFERDDDEG 798
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMPV 227
++ R+ L L+G E RL +MM A R+ + R
Sbjct: 799 ------RRAGRVVDALERALRG------------------EMRLPEMMAAKRNAKGRTRP 834
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P V+V N Y+VV V DR LL+++ TL+ + + A + T GERA
Sbjct: 835 FRVE---PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERA 891
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FYI + G I+S P R I+
Sbjct: 892 VDVFYITDLMGARITS-PTRIATIK 915
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T T + LN+T A V+T + A+++FY+TD MG
Sbjct: 854 VEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDLMG 902
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P+VT+ N A Y+V+ V DRT LFD+ TL ++ + A I T RA F+IR
Sbjct: 780 PIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIR 839
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+G ++ Q V + L A G
Sbjct: 840 DTEGGKLTDSARLQAVHEALLLAAG 864
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN+ T+++V + R G L + + L +L+L I A I++ D+FH+
Sbjct: 780 PIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIR 839
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KLTD + + + ++L
Sbjct: 840 DTEGGKLTDSARLQAVHEAL 859
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ TDR G L ++ LA+L S+ AK+ T GR A + +++D G + DS +
Sbjct: 793 TVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRDTEGGK-LTDSAR 851
Query: 177 IDRIEARL 184
+ + L
Sbjct: 852 LQAVHEAL 859
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D + G P E + ++ R+
Sbjct: 741 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAD-GHPFE-ADRLPRLRQ 798
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L+G+ R A + D+ +R R T +T N
Sbjct: 799 MIDKTLRGEVIPREA-----------------IKSRDKIKKRERAFRVPTH---ITFDND 838
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + + A I T GE+ FY++ + G
Sbjct: 839 GSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFGLKFH 898
Query: 303 SEPERQRVIQCLEAAV 318
SE +++ + + L A+
Sbjct: 899 SEAKQRSLDRKLREAI 914
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L LN+ I A I++ G +D F+V D+
Sbjct: 833 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDM 892
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K E+ +++ L E I G
Sbjct: 893 FGLKFHSEAKQRSLDRKLREAISAG 917
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN++ T+++V R G+L + ++L+ NL I A+I + G +DVF+VT
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 83 DLNGNKLT 90
DL+G K+T
Sbjct: 913 DLHGAKIT 920
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+TR + LN+ A + T + +++FYVTD G KI A
Sbjct: 868 IEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHG----AKITTAA 923
Query: 388 RQ 389
RQ
Sbjct: 924 RQ 925
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
+P V++ N ++V+ V DRT LL+D+ L+ + A I T GER FY+
Sbjct: 852 HPEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYV 911
Query: 294 RHIDGTPISS 303
+ G I++
Sbjct: 912 TDLHGAKITT 921
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D + G P E ++++ R+
Sbjct: 751 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPYE-AERLPRLRE 808
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ I + + ER + V H +T N
Sbjct: 809 MIHKTLKGEV-ITGEALKSRDKIKKRERAFN-------------VPTH------ITFDND 848
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 849 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 908
Query: 303 SEPERQRVIQCLEAAVGRRAS 323
SE +++ + L +A+ A
Sbjct: 909 SEAKQKSLEAKLRSAIAEGAK 929
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 922
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S + + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGRQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQ 336
A I T GE+ FY+ + G ++++ R+AS RL+ M +++
Sbjct: 869 SARITTFGEKVIDTFYVTDLFGQKVTND--------------NRQASIATRLKAVMSEQE 914
Query: 337 GLLAD 341
L D
Sbjct: 915 DELRD 919
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I L+ +
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAV 909
>gi|217071952|gb|ACJ84336.1| unknown [Medicago truncatula]
Length = 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQCLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISSEPER-------- 307
+ L +D++ D + V + N++ + ++ +++ + +PER
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAKGFQNIDLFVQQKEDGQKIIDPERLKTLCTCL 316
Query: 308 -QRVIQCLEAAVGRRASE-----GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV--- 358
++++ L + R + +EL + R + DVT + G+ + AEV
Sbjct: 317 KEKMLHPLRVIIVNRGPDIELLVANPVELSGKGRPRVFYDVTLALKALGVFIFSAEVVRH 376
Query: 359 -STERDEALNIFYVTDEMGNP-----ADPKIIEAVRQKI 391
+ ER + F + + P A +I++ VR+ +
Sbjct: 377 STQERQWEVYRFLLDESRDFPLNSSKARSQIVDKVRRTL 415
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T NGR
Sbjct: 718 QQGRALVTMAKPHAFETVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T NGR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 753 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 812
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G + RL MM A R + +
Sbjct: 813 ------RRATRIGDTIEQVLEG------------------KLRLPDMM-ARRTASKTRLK 847
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
S + P V++ N W+DR Y+V+ V DR LLF + ++ + + A + T GERA
Sbjct: 848 PFSVE-PEVSINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERA 905
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 906 RDVFYVTDLLGAQITA-PTRQAAIK 929
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 853 PEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 912
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 913 DLLGAQITAPTRQAAIKRAL 932
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + L+ + +VV+A+ +T +G + +++D + GSP E+S+ I R+
Sbjct: 732 ADHPGIFARLAGALSLVGANVVDARTFTSKDGYATAAFWIQD-SEGSPYEESR-IPRLRD 789
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+R L G+ R A ++ ++ + + P + N
Sbjct: 790 TIRKTLMGEVKPREAILSRG---------------------KLKKREKAFNVPTSIAFDN 828
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL+D+ TL++ + A I T GE+ FY++ + G
Sbjct: 829 EGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFGLKF 888
Query: 302 SSEPERQRVIQ 312
+ P +Q+ ++
Sbjct: 889 YT-PSKQKTLE 898
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 20 MNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
N P + DN T+++VD+ R G+L + + L++ N+ I A I++ G +D
Sbjct: 818 FNVPTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDT 877
Query: 79 FHVTDLNGNKLTDESVISYIEQSL 102
F+V D+ G K S +E+ L
Sbjct: 878 FYVKDMFGLKFYTPSKQKTLERRL 901
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG----NPADPKI 383
+E+ DR GLL D+ RT E+ + ++ A ++T ++ ++ FYV D G P+ K
Sbjct: 837 IEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFGLKFYTPSKQKT 896
Query: 384 IE 385
+E
Sbjct: 897 LE 898
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T NGR
Sbjct: 718 QQGRALVTMAKPHAFETVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G A + +A ++ +
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSG-----KAHLPDVLAKRTKPKKAARAF 830
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
+ P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 831 KVE---------------PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ +Q +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDD--DERRQAERVGKVIEDVLSGKAHLPD-------------------M 816
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 817 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 875
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 876 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 642 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 701
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 702 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 740
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 741 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 799
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 800 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 848
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 779 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 830
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 831 GNIKRKLLALLGAENG 846
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+ DR LL ++ ++D+ + A I T GE+ FY+
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
+ G IS+ + + + L A +G A G R
Sbjct: 894 DLVGHKISNATRQGNIKRKLLALLG--AENGAR 924
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 906
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 907 GNIKRKLLALLGAENG 922
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P + IDNA+ T++++ R G+L + L+ LNL I A++++ G +DVF+V
Sbjct: 821 APDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYV 880
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T + I +++ + G
Sbjct: 881 TDLTGTKITQPDRQATIRRAVMGVFEG 907
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSG 168
+++ G+T L + D LL+ + A ++V+A+++T +G + I +
Sbjct: 717 TDASRGVTELTVYSPDHPRLLAILTGACAAAGGNIVDAQIFTTADGFVLDTIVLSRAFDQ 776
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ ++ RI + LKG+ IR A + ADR + R
Sbjct: 777 DE-DEMRRAGRIATAIERALKGE--IRIADLV-----------------ADR-HPRKDRP 815
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
R P +++ N +V+ + DR LL+D+ L+ + + A + T GERA
Sbjct: 816 RTFQVAPDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAV 875
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGV 326
FY+ + GT I ++P+RQ I RRA GV
Sbjct: 876 DVFYVTDLTGTKI-TQPDRQATI--------RRAVMGV 904
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LE+ DR GLL D+T LN+T A V+T + A+++FYVTD G KI +
Sbjct: 837 LEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDLTGT----KITQPD 892
Query: 388 RQ 389
RQ
Sbjct: 893 RQ 894
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 23/230 (10%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T +GR
Sbjct: 718 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRAL 777
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMF 217
I + ++ ++ +R+ + +VL G + M
Sbjct: 778 DTILISREFDTDDDDERRRAERVGKVIEDVLSGKAHLPD-------------------ML 818
Query: 218 ADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 819 AKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIAS 877
Query: 278 ATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 878 AHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 925
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 856 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 907
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 908 GNIKRKLLALLGAENG 923
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q + + ++F +T + + D LLS + A ++V+A+++T NGR
Sbjct: 459 QQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRAL 518
Query: 158 SLIYV-KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
I + ++ ++ ++ ++ +R+ + +VL G + M
Sbjct: 519 DTILISREFDTDD--DERRRAERVGKVIEDVLSGKAHLPD-------------------M 557
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
A R + + P V + N ++V+ V+ DR LL ++ ++D+ +
Sbjct: 558 LAKRTKPKKAARAFKVE-PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIA 616
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
A I T GE+ FY+ + G IS+ + + + L A +G A G R
Sbjct: 617 SAHITTFGEKVIDSFYVTDLVGHKISNATRQGNIKRKLLALLG--AENGAR 665
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGL 393
DR GLL+++T + L++ A ++T ++ ++ FYVTD +G+ KI A RQ
Sbjct: 596 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNATRQ---- 647
Query: 394 SNLKVKELPMIYHQKG 409
N+K K L ++ + G
Sbjct: 648 GNIKRKLLALLGAENG 663
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN++ T++++ R G+L + L LNL I A+I + G +DVF+VT
Sbjct: 820 PEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVT 879
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+T + I ++L
Sbjct: 880 DLTGTKITHAGRQATITRTL 899
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ F G+T L + D LL+ V A ++V+A+++T D +
Sbjct: 715 TDQFRGVTELTILSPDHPRLLAIVTGACAAAGGNIVDAQIFT----------TTDGMALD 764
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH-QMMFADRDYERMPVL 228
I S+ DR E LR + V+ A+ ER L ++ AD + P
Sbjct: 765 TIVLSRAFDRDEDELRRAER-----------VAKAI---ERALKGEVKIADLVDGKRPAK 810
Query: 229 RHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
S + P V + N +V+ + DR LL+D+ L + + A I T GE
Sbjct: 811 ERSKAFHVPPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGE 870
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCL 314
+A FY+ + GT I+ + + + L
Sbjct: 871 KAVDVFYVTDLTGTKITHAGRQATITRTL 899
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+T + LN+ A + T ++A+++FYVTD G KI A
Sbjct: 835 IEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDLTGT----KITHAG 890
Query: 388 RQ 389
RQ
Sbjct: 891 RQ 892
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEY 273
F D + + + D P+V ++ A++ + + V KD+ + V L +
Sbjct: 684 FTDIAWHTHAIAARTDDQPLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNL 743
Query: 274 VVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQ-----------CLEAAVGRR 321
+ A I ++ ++ F++ + DG P+ + P + IQ +GRR
Sbjct: 744 SIQDAKIYSSNSGHTIDTFFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRR 803
Query: 322 ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
++ LE+ DR GLLA + R F + + + A+++T
Sbjct: 804 TPRRLKYFASPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATL 863
Query: 362 RDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+ +IF++ D G P DP + E ++Q+I
Sbjct: 864 GERVEDIFFIVDSQGKPLGDPVLCEKLQQEI 894
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDNA+ T+V++ R G+L E + L+L I A++++ G +DVF+VT
Sbjct: 828 PDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVT 887
Query: 83 DLNGNKLT 90
DL G ++T
Sbjct: 888 DLTGTRVT 895
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 28/207 (13%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGS 169
+ G+T + + D LL+ V A ++V+A+++T +G I++
Sbjct: 723 DPVRGVTEITVYSPDHPRLLAIVTGACAAAGSNIVDAQIFTTTDGFALDTIFISRAFERD 782
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
++ ++ RI A + LKG+ I + AD+ P
Sbjct: 783 D-DELRRTKRITAAIERALKGEIKIAD-------------------LVADK---HPPTST 819
Query: 230 HSTDYPV---VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+ +PV V + N +VV + DR LL+++ + + + A + T GER
Sbjct: 820 RAKTFPVPPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGER 879
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQC 313
A FY+ + GT + ++P+RQ I+
Sbjct: 880 AVDVFYVTDLTGTRV-TQPDRQAAIRA 905
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T F LN+T A V+T + A+++FYVTD G
Sbjct: 843 VEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTDLTGT 892
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T ++++V + R +L Q L D + I KAYI+++ +DVF+V
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KL +S+ I Q+L
Sbjct: 828 DSRGEKLLGDSLREDIVQAL 847
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
L DR GLL+++ VLA +V A+++T +G I ++ V+ +
Sbjct: 672 LMSHDRPGLLAKLCGVLALHNLAVAMAQIFTWEDGVIVDVVTVRPQDGAG---------- 721
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTH---TERRLHQMMFADRDYERMPVLRHSTDYPV 236
D D S + + +A++H +L+Q Y R L + D P
Sbjct: 722 ---------FSDKDWDSFRADIDLALSHRLDLGHKLYQKW--QTTYGRKAELVGAID-PR 769
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V V N + +YSV+ V DR LL+ + TL D ++ A I T E+ FY+
Sbjct: 770 VVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVLDS 829
Query: 297 DGTPISSEPERQRVIQCL 314
G + + R+ ++Q L
Sbjct: 830 RGEKLLGDSLREDIVQAL 847
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q+L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 712 DQALATM--VRTHSFHAITEITVLAPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRAL 769
Query: 158 SLIYVKDCNSGSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
I + N PI++ + + + I + +VL G K + T T+ R
Sbjct: 770 DTILI---NREFPIDEDEMRRANTISKMIEDVLAGK------KRLPEVIATRTKGRKRNK 820
Query: 216 MFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
F T P VT+ N ++V+ ++C DR LL +V L D+ +
Sbjct: 821 TF--------------TVKPHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDI 866
Query: 276 FHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
A I T GE+ FY+ + G I++E + + L+A + + E
Sbjct: 867 HSARITTFGEKVIDTFYVIDLVGQKITNENRQGSISVRLKAVMSEQPDE 915
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++++ R G+L E VL DL+L I A I++ G +D F+V
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ I L+ +
Sbjct: 886 DLVGQKITNENRQGSISVRLKAV 908
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 25/201 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T N G + +++D + G P E++ RI
Sbjct: 739 ADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQDGDDG-PYEEA----RI-P 792
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
RLR +++ T+S V TE A RD +++ + P +T N
Sbjct: 793 RLRKMIEK---------TLSGEVVATE--------AIRDRDKIKKRERAFRVPTHITFDN 835
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL D+ L M + A I T GE+ FY++ + G
Sbjct: 836 EGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDMFGLKY 895
Query: 302 SSEPERQRVIQCLEAAVGRRA 322
+ +++ + + + A+ + A
Sbjct: 896 HAASKQRTLEKKMREAISKGA 916
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L +N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K S +E+ + E I G
Sbjct: 891 FGLKYHAASKQRTLEKKMREAISKG 915
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D G P E + ++ R+
Sbjct: 760 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDTE-GHPYE-ADRLPRLSQ 817
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ I + + ER + V H +T N
Sbjct: 818 MIHKTLKGEV-IAGEALKSRDKIKKRERAFN-------------VPTH------ITFDND 857
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 858 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 917
Query: 303 SEPERQRVIQCLEAAVGRRAS 323
SE +++ + L +A+ A
Sbjct: 918 SEAKQKSLEAKLRSAIAEGAK 938
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 837 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 896
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 897 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 931
>gi|372280408|ref|ZP_09516444.1| PII uridylyl-transferase [Oceanicola sp. S124]
Length = 921
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +V+D G+P E S+ + R+
Sbjct: 739 ADHPGIFARLSGALALVGANVVDARTYTTVDGYATAAFWVQDAE-GAPYEASR-LPRLTQ 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ +L+G+ R A M DR +R + ST V N
Sbjct: 797 MIHKILRGEVVTREA-----------------MQDRDRIKKRERAFKVSTS---VAFDNE 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL D+ TL + A I T GE+ FY++ + G +
Sbjct: 837 GSEIYTIIEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFGLKLF 896
Query: 303 SEPERQRVIQCLEAAVG 319
S+ +++ + L A+
Sbjct: 897 SDSKQKALEAKLREAIA 913
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 VAFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G KL +S +E L E I G+ +
Sbjct: 891 FGLKLFSDSKQKALEAKLREAIAAGQERA 919
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
VVIDN AT+V V + R G+L + + DL+L + A I++ +DVF+VTDL
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 85 NGNKLTDE 92
+GNK+ DE
Sbjct: 854 DGNKILDE 861
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-D 380
+S+ +++ DR GLL +++ + L+VT A ++T D+ +++FYVTD GN D
Sbjct: 801 SSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDLDGNKILD 860
Query: 381 PKIIEAVRQKI 391
+A+R ++
Sbjct: 861 EYSRKAIRDRV 871
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + I+ I L
Sbjct: 894 DLTGQKIDNPARIATIRNRL 913
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRASE 324
GE+ FY+ + G I + R R++ LE V R +
Sbjct: 883 GEKVIDTFYVTDLTGQKIDNPARIATIRNRLMATLEGIVPERGGK 927
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQKI 391
DR GLL+++T T + L++ A ++T ++ ++ FYVTD G D P I +R ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
>gi|357503147|ref|XP_003621862.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
gi|355496877|gb|AES78080.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
Length = 418
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 36/357 (10%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQYLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISSEPER-------- 307
+ L +D++ D + V + N++ + ++ +++ + +PER
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAKGFQNIDLFVQQKEDGQKIIDPERLKTLCTCL 316
Query: 308 -QRVIQCLEAAVGRRASE-----GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ ++ L + R + +EL + R + DVT + G+ + AEV
Sbjct: 317 KEEMLHPLRVIIVNRGPDIELLVANPVELSGKGRPRVFYDVTLALKALGVFIFSAEV 373
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-IRHIDGTPISSEPE 306
++V V C D+ L D+ + + + A I+T G ++ F+ I H I E
Sbjct: 21 TIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWENL 80
Query: 307 RQRVIQCLEAAV------GRRASEG--VRLELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ R++ + + R S L++ + D++GLL D+ L + R +V
Sbjct: 81 KTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVKV 140
Query: 359 STERD-EALNIFYVTDEM 375
D AL++F++TDEM
Sbjct: 141 MPTPDGRALDLFFITDEM 158
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 21/195 (10%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + L+ + +VV+A+ +T A+ + + G+P ED + + R+
Sbjct: 755 ADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSEGTPYEDIR-LPRLREV 813
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A + D+ +R R T +T N
Sbjct: 814 IERTLKGEVVARDA-----------------LAGKDKVKKREKAFRVKTS---ITFDNEG 853
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
Y+++ V +DR LL D+ TL + + A I T GE+ FY++ + G +
Sbjct: 854 SEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFGLKYHA 913
Query: 304 EPERQRVIQCLEAAV 318
+ +R + L A+
Sbjct: 914 QGKRDALENKLHEAI 928
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL D+TRT N + + A ++T ++ ++ FYV D G
Sbjct: 860 IEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFG 908
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 847 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDM 906
Query: 85 NGNKLTDESVISYIEQSL 102
G K + +E L
Sbjct: 907 FGLKYHAQGKRDALENKL 924
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D + G P E ++++ R+
Sbjct: 751 ADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPYE-AERLPRLRE 808
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L+G+ I + + ER + V H +T N
Sbjct: 809 MIHKTLRGEV-ITGEALKSRDKIKKRERAFN-------------VPTH------ITFDND 848
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 849 GSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFGLKYY 908
Query: 303 SEPERQRVIQCLEAAVGRRAS 323
SE +++ + L +A+ A
Sbjct: 909 SEAKQKSLEAKLRSAIAEGAK 929
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 922
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I + L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N+F N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G
Sbjct: 839 NNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
I ++ + I +L VL +N
Sbjct: 898 HKISNATRQGNIRRKLLGVLGAEN 921
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+ DR LL ++ ++D+ + A I T GE+ FY+
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G IS+ + + + L +G
Sbjct: 894 DLVGHKISNATRQGNIRRKLLGVLG 918
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VV+DN++ T+++V R G+L + ++ LNL I A+I + G +D F+V
Sbjct: 837 APEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYV 896
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G K+ + I++ L
Sbjct: 897 TDLTGAKIIAPQRQATIKRQL 917
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V N Y+V+ V DR LLFD+ ++ + + A I T GERA FY+
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 295 HIDGTPISSEPERQRVIQ 312
+ G I + P+RQ I+
Sbjct: 898 DLTGAKIIA-PQRQATIK 914
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR+GLL D+T + LN+ A + T + A++ FYVTD G KII
Sbjct: 853 IEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTDLTG----AKIIAPQ 908
Query: 388 RQKIGLSNLKVKELPMIYHQKGESEEQTVGVGGA 421
RQ + +K ++L ++ E GGA
Sbjct: 909 RQ----ATIK-RQLLEVFQPSAEKRPARGQGGGA 937
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I + L
Sbjct: 929 DLVGHKISNATRQGNIRRKL 948
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N+F N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G
Sbjct: 874 NNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VG 932
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
I ++ + I +L VL +N
Sbjct: 933 HKISNATRQGNIRRKLLGVLGAEN 956
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N ++V+ V+ DR LL ++ ++D+ + A I T GE+ FY+
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G IS+ + + + L +G
Sbjct: 929 DLVGHKISNATRQGNIRRKLLGVLG 953
>gi|388501956|gb|AFK39044.1| unknown [Medicago truncatula]
Length = 418
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 165/399 (41%), Gaps = 45/399 (11%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQCLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISSEPER-------- 307
+ L +D++ D + V + N++ + ++ +++ + +PER
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAKGFQNIDLFVQQKEDGQKIIDPERLKTLCTCL 316
Query: 308 -QRVIQCLEAAVGRRASE-----GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEV--- 358
+ ++ L + R + +EL + R + DVT + G+ + AEV
Sbjct: 317 KEEMLHPLRVIIVNRGPDIELLVANPVELSGKGRPRVFYDVTLALKALGVFIFSAEVVRH 376
Query: 359 -STERDEALNIFYVTDEMGNP-----ADPKIIEAVRQKI 391
+ ER + F + + P A +I++ VR+ +
Sbjct: 377 STQERQWEVYRFLLDESRDFPLNSSKARSQIVDKVRRTL 415
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 34/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + AV A R L
Sbjct: 797 ------RRATRIGEMIEEVLEG-------KLRLPEAV------------ARRATNGRAKL 831
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P V++ N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 832 RAFVVEPEVSINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 890
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 891 RDVFYVTDLLGAQITA-PTRQAAIK 914
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 838 PEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 897
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 898 DLLGAQITAPTRQAAIKRAL 917
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 726 GATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPFGGAFHSP 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD- 233
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 786 EQLGRIKAAIEDSLSNRHRL----------ITKLEAR--------------PLPRTRAEA 821
Query: 234 ---YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 822 FQIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDT 881
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
FY+ + G I S Q + + L A G SE
Sbjct: 882 FYVTDLLGGKIESRARLQTLERRLLEAAGGETSE 915
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + +E+ L
Sbjct: 886 DLLGGKIESRARLQTLERRL 905
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +VIDN T+++V + R G+L + + DL L I A+I++ G +DVF+VT
Sbjct: 832 PDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT 891
Query: 83 DLNGNKLTDESVISYI 98
K+TDE+ S I
Sbjct: 892 GPGKQKVTDEATKSRI 907
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ E +E+ DR GLL D+ R F + GL++ A ++T ++A+++FYVT P
Sbjct: 841 SQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT----GPGKQ 896
Query: 382 KII-EAVRQKI 391
K+ EA + +I
Sbjct: 897 KVTDEATKSRI 907
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P + + N A + +V+ V DR LL+D+ D+ + A I T GE+A FY+
Sbjct: 832 PDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT 891
Query: 295 HIDGTPISSEPERQRV 310
++ E + R+
Sbjct: 892 GPGKQKVTDEATKSRI 907
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++ID I L L+ +D +T +RR+ + L+H
Sbjct: 761 NNPERIDEIRKGLIAALRNPDDY----------LTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCL 314
++ D P+S R+ Q L
Sbjct: 859 FVTDADNQPLSDPQFCLRLQQAL 881
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+V ++ R + + + + D+ V + + + A I T+ + L+
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 292 YI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGVR------------ 327
YI DG+PI + PER + + L AA + RR ++
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
LE+ DR GLLA V + F + L+V A+++T + ++F+VTD P
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 379 ADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
+DP+ ++Q + +KEL + E+E+Q
Sbjct: 869 SDPQFCLRLQQAL------IKEL------QQENEQQ 892
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + V LA + +VV+A+ +T +G + +++D + G P E S+ + R+
Sbjct: 755 ADHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDAD-GHPFEASR-LPRLNQ 812
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G+ ++ T D+ +R + T +T N
Sbjct: 813 MILKTLNGE--------VITGEALETR---------DKFKKREKAFKVPTH---ITFDNE 852
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DRT LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 853 GSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYVKDMFGLKYH 912
Query: 303 SEPERQRVIQCLEAAVGR 320
S+ ++ + + L A+ +
Sbjct: 913 SKSKQDFLERKLREAISK 930
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+++K P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 832 DKFKKREKAFKVPTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIA 891
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYG 108
+ G +D F+V D+ G K +S ++E+ L E I G
Sbjct: 892 TYGEQVVDTFYVKDMFGLKYHSKSKQDFLERKLREAISKG 931
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+D G+ S + LA + +VV+A+ +T A+ ++ + G P E + ++ R+
Sbjct: 737 SDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDSEGHPYE-ATKLPRLRGM 795
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNW 242
+ LKG+ R A DRD ++ +P +T N
Sbjct: 796 IEKTLKGEVVARDA-------------------LKDRD--KIKKREREFRFPTHITFDNE 834
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y++V V +DR LL+D+ L + A I T G + FY++ + G +
Sbjct: 835 GSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFGLKLH 894
Query: 303 SEPERQRVIQCLEAAVGRRA 322
S ++ + + L A+ R A
Sbjct: 895 SGQRQESLEKRLRDAIIRGA 914
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+V+VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 829 ITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDM 888
Query: 85 NGNKL 89
G KL
Sbjct: 889 FGLKL 893
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++ IDN T TL++V + R GIL + + + +N+ I+ A IS+ G+ DVFH+
Sbjct: 755 QISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHIES 814
Query: 84 LNGNKLTDE----SVISYIEQSLETIHYG 108
G K+ D+ ++S +E +L ++ G
Sbjct: 815 PEGGKIKDKEHANELVSALEYALSCVYKG 843
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 211 RLHQM---MFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
RLH+ +F R+P +++ N + +Y+++ V DR+ +L+D+
Sbjct: 735 RLHKKRNSLFVKSGASRVPT--------QISIDNESSETYTLLEVITGDRSGILYDMASL 786
Query: 268 LTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
+ M + A I+T G+ + F+I +G I + ++ LE A+
Sbjct: 787 FSRMNVDIRMARISTTGQSVFDVFHIESPEGGKIKDKEHANELVSALEYAL 837
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + I+ I L
Sbjct: 894 DLTGQKIDSPARIATIRNRL 913
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 34/225 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTADGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ + +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPKRGAKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEAAVGRRASE 324
GE+ FY+ + G I S R R++ LE R +
Sbjct: 883 GEKVIDTFYVTDLTGQKIDSPARIATIRNRLMATLEGIAPERGGK 927
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQKI 391
DR GLL+++T T + L++ A ++T ++ ++ FYVTD G D P I +R ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR+G L + A L +L+ ++ AK+ G A+ Y+ D + I S +++ I +
Sbjct: 98 DRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYITDALTSEKILKSARLEEIRLTI 155
Query: 185 -RNVLKGDNDIRSAKMTVSMAVTHTER-RLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
N+LK + +A + A TE LH + D P ++ S V V
Sbjct: 156 FNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRD-----TPKIKTS-----VEVSEE 205
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
++S V+++ +DR LL D+V TL D+ V A ++T G A EFY+ + G P++
Sbjct: 206 ESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEFYVTY-HGEPLN 264
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 44/192 (22%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG---------- 284
P+V + N D +VV ++ DR L D + L +++ + A I
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGAGANKFYITDA 136
Query: 285 -------ERAYLEFYIRHIDGTPISSEPERQRVIQCLEAA-----------VGRRASEGV 326
+ A LE I + PE I +A +G R + +
Sbjct: 137 LTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTPKI 196
Query: 327 R--LELCME-------------DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
+ +E+ E DR GLL D+ T ++ +NV AEV TE A + FYV
Sbjct: 197 KTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEFYV 256
Query: 372 TDEMGNPADPKI 383
T G P +P +
Sbjct: 257 TYH-GEPLNPSM 267
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++++ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
DL G K+ + ++ I + L G + NG
Sbjct: 894 DLTGQKIDSPTRMATIHKRLIETLEGTAPERNG 926
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAK 198
I+ ++ I RL L+G R+ K
Sbjct: 898 QKIDSPTRMATIHKRLIETLEGTAPERNGK 927
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVK---D 164
+++ F +T + + D LLS + A ++V+A+++T +GR I + D
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFD 787
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ ++ ++ +R+ + +VL G + M T+ R +F R
Sbjct: 788 LDE----DERRRAERVGRLIEDVLSGKS------WLPEMIEKRTKPRRGAKVF------R 831
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P ++N +SV+ ++ DR LL ++ L+D+ + A I T G
Sbjct: 832 IP--------PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFG 883
Query: 285 ERAYLEFYIRHIDGTPISSEPER-----QRVIQCLEAAVGRR 321
E+ FY+ + G I S P R +R+I+ LE R
Sbjct: 884 EKVIDTFYVTDLTGQKIDS-PTRMATIHKRLIETLEGTAPER 924
>gi|167854603|ref|ZP_02477384.1| uridylyltransferase [Haemophilus parasuis 29755]
gi|167854358|gb|EDS25591.1| uridylyltransferase [Haemophilus parasuis 29755]
Length = 864
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHV 81
P V+I N AT + V + + Q+L+ + I A I +SD +D F +
Sbjct: 672 PMVLISNQYARGATEIFVHCQDQAQLFARIAQMLSQKKVSIHDAQILTSDHGLVLDSFII 731
Query: 82 TDLNGNKLTDE------------------SVISYIEQSLETIHYGR-------SNSFNGL 116
T++NG L DE V + ++S++ + R +NS
Sbjct: 732 TEMNGEPLDDERSEQIQSALVKTLLADTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 791
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
TA EL DR GLL+++ + L+ +++ AK+ T R+ V + +G+ E+ Q
Sbjct: 792 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 850
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + LA + +VV+A+ +T +G + + +++D + +P D ++ R+
Sbjct: 740 DHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQDSDD-TPY-DEDRLPRLRKM 797
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNW 242
+ L GD R A DRD ++ + P +T N
Sbjct: 798 IERTLAGDILPRDA-------------------LTDRD--KIKKRERAFKVPTHITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LLFD+ +L + +A I T GE+ FY++ + G
Sbjct: 837 GSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDMFGLKFY 896
Query: 303 SEPERQRVIQCLEAAV 318
SE +++ + + L A+
Sbjct: 897 SESKQKTLERKLRDAI 912
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 891 FGLKFYSESKQKTLERKL 908
>gi|297827181|ref|XP_002881473.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
gi|297327312|gb|EFH57732.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 127/298 (42%), Gaps = 19/298 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + + ++ D + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTD--TRELLGTVKRRDEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT---HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
+T + + +F+ P ++ +TV N +++++++ C+D
Sbjct: 197 PEITARSQASSSVAETLFSSDVSGEHPSGLQTSSNVSITVDNLLSSAHTLIHITCQDHKG 256
Query: 260 LLFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIRHIDGTPISSEPERQRVIQCLEA 316
LL+D++ T D + + G ++ +I DG I + +I L A
Sbjct: 257 LLYDIMRTFKDFNIQISYGRFTIKRGRNCEIDLFIVQSDGRKILDSSKLNALITRLRA 314
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + ++V+A+ +T +G ++ +V+D + G P E ++ + R+
Sbjct: 733 DHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQD-SEGRPYEVAR-LPRLRGM 790
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQN 241
+ LKG+ R A ADRD +R R T +T N
Sbjct: 791 IDKTLKGEVLPREA-------------------LADRDKVKKREREFRFPTH---ITFDN 828
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL+D+ TL + A I T G + FY++ + G +
Sbjct: 829 EGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFGLKL 888
Query: 302 SSEPERQRVIQCLEAAVGRRA 322
++ +++ + L A+ A
Sbjct: 889 HTKAKQEALETKLRQAIAEGA 909
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 824 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDM 883
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E L
Sbjct: 884 FGLKLHTKAKQEALETKL 901
>gi|219872237|ref|YP_002476612.1| PII uridylyl-transferase [Haemophilus parasuis SH0165]
gi|219692441|gb|ACL33664.1| uridylyltransferase [Haemophilus parasuis SH0165]
Length = 858
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHV 81
P V+I N AT + V + + Q L+ + I A I +SD +D F +
Sbjct: 666 PMVLISNQYARGATEIFVHCQDQAQLFARIAQTLSQKKVSIHDAQILTSDHGLVLDSFII 725
Query: 82 TDLNGNKLTDE------------------SVISYIEQSLETIHYGR-------SNSFNGL 116
T++NG L DE V + ++S++ + R +NS
Sbjct: 726 TEMNGEPLDDERSEQIQSALVKTLLANTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 785
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
TA EL DR GLL+++ + L+ +++ AK+ T R+ V + +G+ E+ Q
Sbjct: 786 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 844
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDC---NSGSPIEDSQQIDR 179
+D GL S + LA ++V+A++ T NG +V+D +G + S ++ R
Sbjct: 749 SDHPGLFSRIAGALAVAGATIVDARIHTMTNGMALDTFWVQDAQPGGAGGAFDASHKLAR 808
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VT 238
+ + L G RL+ ++ R R P + P V
Sbjct: 809 LSVLIEQALSG--------------------RLN-LVQEIRKVRREPARLRAVQVPGRVV 847
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
+ N+A +++V+ + +DR LL DV +++ + A I T G RA FY++ + G
Sbjct: 848 IDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFG 907
Query: 299 TPISSE 304
+ ++
Sbjct: 908 LKVEND 913
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVR--LELCMEDRQGLLADVTRTFRENGLNVTRAEV 358
+ EP R R +Q V + +EL DR GLL DVT E GL + A +
Sbjct: 830 VRREPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHI 889
Query: 359 STERDEALNIFYVTDEMG 376
+T A+++FYV D G
Sbjct: 890 TTYGVRAVDVFYVKDVFG 907
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN T T+++++ R G+L + +++ L I A+I++ G +DVF+V D
Sbjct: 845 RVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKD 904
Query: 84 LNGNKLTDE 92
+ G K+ ++
Sbjct: 905 VFGLKVEND 913
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 18/287 (6%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDES 93
+++ V+ + G+ + +++ L I + S+DG++ VF V + + L +
Sbjct: 21 SVITVNCPDKTGLGCDLCRIILFFGLSIVRGDFSTDGKWCYIVFWVAGNSSTRWGLLKKR 80
Query: 94 VISYIEQ--SLETIHYGRSNSFNG-----LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++ S I Y R + L+L DR GLL V VL +L+ ++ +
Sbjct: 81 LLGVCPSCSSASGIPYYRDELLQPPRPPDVFLLKLCCHDRRGLLHNVTEVLCELELTIRK 140
Query: 147 AKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ L +V D + + +++ + +L++V+ GD I V +
Sbjct: 141 VKVSTTPDGRVMDLFFVTD--TRELLHTNKRKEETYGQLKSVI-GDGMISCDIEMVGPEI 197
Query: 206 THTE---RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
T L + D + +P ++ VT+ N +++V + C+D LL+
Sbjct: 198 TACSLESSSLPTTITEDMLHWEVPPGSLTSISVSVTMDNSLSPGHTLVQIACQDHKGLLY 257
Query: 263 DVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISSEPERQ 308
D++ TL D + + + R ++ +I DG I +P +Q
Sbjct: 258 DIMRTLKDYNIKISYGRFSIKQRRNCEIDLFIVQADGKKI-VDPSKQ 303
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
V+ Q+ + SV+ V C D+T L D+ + + +T G+ Y+ F++
Sbjct: 9 VIIRQSEKESDLSVITVNCPDKTGLGCDLCRIILFFGLSIVRGDFSTDGKWCYIVFWVAG 68
Query: 296 IDGTPISSEPERQ-RVIQCLEAAVG-----------RRASEGVRLELCMEDRQGLLADVT 343
T +R V +A G R + L+LC DR+GLL +VT
Sbjct: 69 NSSTRWGLLKKRLLGVCPSCSSASGIPYYRDELLQPPRPPDVFLLKLCCHDRRGLLHNVT 128
Query: 344 RTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
E L + + +VST D +++F+VTD
Sbjct: 129 EVLCELELTIRKVKVSTTPDGRVMDLFFVTD 159
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V++DN T+T+V+ R G+L + ++D L I A+I G +D F+V
Sbjct: 830 TPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYV 889
Query: 82 TDLNGNKLTD 91
D +G KLTD
Sbjct: 890 VDADGRKLTD 899
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 38/192 (19%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCNSGSPI--EDSQQIDRIE 181
DR L ++ + +V+ A+V+T G+ + YV+D SG P D + + R+
Sbjct: 741 DRPRLFVDLAEAITAAGANVMGARVFTSRAGQALDVFYVQDA-SGQPFGSHDPRALARLA 799
Query: 182 ARLRNVLKGDNDIRSAKM------TVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
L +G+ R + T + A+T P
Sbjct: 800 ETLACAARGEPVAREPRKPQDLGRTAAFAIT----------------------------P 831
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
V + N A + +VV +DR LL + T++D + A I+ GERA FY+
Sbjct: 832 AVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVVD 891
Query: 296 IDGTPISSEPER 307
DG ++ +R
Sbjct: 892 ADGRKLTDARKR 903
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 33/154 (21%)
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQ--RVIQ 312
DR +L D+ +T V A + T+ L+ FY++ G P S R R+ +
Sbjct: 741 DRPRLFVDLAEAITAAGANVMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAE 800
Query: 313 CLEAA---------------VGRRASEGVR---------------LELCMEDRQGLLADV 342
L A +GR A+ + +E DR GLLA +
Sbjct: 801 TLACAARGEPVAREPRKPQDLGRTAAFAITPAVMLDNEASETSTVVEASGRDRPGLLAAL 860
Query: 343 TRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
RT + GL++ A + + A++ FYV D G
Sbjct: 861 ARTISDAGLSILSAHIDGYGERAVDAFYVVDADG 894
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R+ R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RNKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQINA-PTRQSAIK 912
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N+ T+V+V R G+L Q L+ LNL I A+I++ G +DVF+VT
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + S I ++L
Sbjct: 900 DLMGAKIIGAARHSAIRRAL 919
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSG 168
+++ G+T L + D LL+ + A +V+A++ T +GR I +
Sbjct: 737 TDAARGVTELTVFAPDHPKLLAVIAGACASAGAHIVDAQISTTTDGRALDTISLTRAFE- 795
Query: 169 SPIEDSQQI---DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
+DS ++ +RI A ++ L G E RL +++ +R+
Sbjct: 796 ---QDSDELRRTERIAAAIQKSLAG------------------EIRLPEIV-----AKRI 829
Query: 226 PVL-RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
P R T P VT+ N W++R ++VV V DR LL+ + TL+ + + A I T
Sbjct: 830 PKRPRAFTVEPEVTLNNSWSNR-HTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATF 888
Query: 284 GERAYLEFYIRHIDGTPISSEPE----RQRVIQCLEA 316
GERA FY+ + G I R+ ++Q L+A
Sbjct: 889 GERAVDVFYVTDLMGAKIIGAARHSAIRRALLQVLDA 925
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL +T+T LN+ A ++T + A+++FYVTD MG KII A
Sbjct: 855 VEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTDLMG----AKIIGAA 910
Query: 388 RQ 389
R
Sbjct: 911 RH 912
>gi|452819635|gb|EME26690.1| hypothetical protein Gasu_56960 [Galdieria sulphuraria]
Length = 398
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 143/350 (40%), Gaps = 47/350 (13%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS--DGRFFMDVFHVT-DLNGNKLTDE 92
T V + R G+LL+ + L NL I A I + DG D F + +G+K+T
Sbjct: 16 TWVIIKCKDRSGLLLDIIHTLVHFNLSIHSAVIETLQDGTI-QDRFGIRRKEDGSKITHP 74
Query: 93 SVISYIEQSLE------TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + +LE I ++ + L + +R LL ++ + L Q V
Sbjct: 75 DDLEPLRMALERVIGEKPIRIFWKHNVDIFQVLHIVCPERSHLLGDLVSFLESEQLLVKA 134
Query: 147 AKVWTHNGRIASLIYVKDCNSGSP-IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
+V + + +S I++ CN + I D I + + V++ + + V
Sbjct: 135 CEVVSSD---SSDIWICFCNQNNQLIIDHNHIKHLIDGIMGVIEDPSKV---------VV 182
Query: 206 THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
+ + ++ Q + + H +Y V + + ++ V V DR LL+D+V
Sbjct: 183 LNRKHKVAQSLHS-----------HHHEYGGRIVIDNSSGPFTTVAVNTDDRFGLLYDLV 231
Query: 266 CTLTDMEYVVFHATINTAGE-------RAYLEFYIRHIDGTPISSEPE-----RQRVIQ- 312
L+ Y + A I T + +AY F I G + ++ E RQ ++
Sbjct: 232 LALSRGGYSIISANITTREDIEKPESVKAYDIFEISDGSGEKVCNDFEELNQLRQSLMDA 291
Query: 313 CLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTER 362
C A+ R + +ELC + + +T+ R GL V RA + +ER
Sbjct: 292 CTHPALIDRRDNHIIVELCYSQQMKCIHGITQGLRNMGLAVQRAMIRSER 341
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA +VV+A+ +T +G + +++D + G P E + ++ R++
Sbjct: 757 ADHPGIFARIAGALALAGANVVDARSYTTKDGYVTDAFWIQDAD-GHPFE-AARLPRLKQ 814
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A T D+ +R T +T N
Sbjct: 815 MIHKTLKGEVVARDALKT-----------------RDKIKKREKAFNVPTH---ITFDND 854
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ TL + +A I T GE+ FY++ + G
Sbjct: 855 GSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYY 914
Query: 303 SEPERQRVIQCLEAAVGRRASEGV 326
SE +QR LEA + + +EG
Sbjct: 915 SE-SKQR---TLEAKLRKAIAEGA 934
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 834 DKIKKREKAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K ES +E L
Sbjct: 894 TYGEQVVDTFYVKDMFGLKYYSESKQRTLEAKL 926
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 34/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 738 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISIRREYDRDEDEG 797
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + AV A R L
Sbjct: 798 ------RRATRIGEIIEEVLEG-------KLRLPEAV------------ARRATSSKTKL 832
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P +++ N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 833 RAFVVEPEISINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 892 RDVFYVTDLLGAQITA-PTRQAAIK 915
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|87198706|ref|YP_495963.1| PII uridylyl-transferase [Novosphingobium aromaticivorans DSM
12444]
gi|123490505|sp|Q2GAJ4.1|GLND_NOVAD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|87134387|gb|ABD25129.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Novosphingobium
aromaticivorans DSM 12444]
Length = 912
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 31/217 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + + ++++A++ T NG V+D G P+ +
Sbjct: 720 GATLVTVLAADHPGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDP-LGRPLNE 778
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ QI+R++ + + L K+ +A P+ R D
Sbjct: 779 ASQIERLKNAIADALAN-----RVKLVPQLAAR-------------------PLARPRAD 814
Query: 234 Y----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P+V N A ++V+ V +DR LL + L + +V A I T GERA
Sbjct: 815 AFDVRPIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVD 874
Query: 290 EFYIRHIDGTPISSEPERQRV-IQCLEAAVGRRASEG 325
FY+ + G + SE + V + LEAA R+ +
Sbjct: 875 TFYVTDVLGEKVDSEARMKAVEKRLLEAAEDRKVKDA 911
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ DN T+++V + R +L + L + L++ A+I++ G +D F+VT
Sbjct: 820 PIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVT 879
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ + +E+ L
Sbjct: 880 DVLGEKVDSEARMKAVEKRL 899
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 734 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 793
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPV 227
++ RI + VL+G ++ MA T ++ RL +
Sbjct: 794 ------RRATRIGDTIEQVLEG-----KLRLPDVMARRTASKTRLKPFIVE--------- 833
Query: 228 LRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N W+DR Y+V+ V DR LLF + ++ + + A + T GER
Sbjct: 834 -------PEVTINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQ 312
A FY+ + G I++ P RQ I+
Sbjct: 886 ARDVFYVTDLLGAQITA-PTRQAAIK 910
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 834 PEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 894 DLLGAQITAPTRQAAIKRAL 913
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 734 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 793
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPV 227
++ RI + VL+G ++ MA T ++ RL +
Sbjct: 794 ------RRATRIGDTIEQVLEG-----KLRLPDVMARRTASKTRLKPFIVE--------- 833
Query: 228 LRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N W+DR Y+V+ V DR LLF + ++ + + A + T GER
Sbjct: 834 -------PEVTINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQ 312
A FY+ + G I++ P RQ I+
Sbjct: 886 ARDVFYVTDLLGAQITA-PTRQAAIK 910
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 834 PEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 894 DLLGAQITAPTRQAAIKRAL 913
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 342 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 401
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G K+ + V R F
Sbjct: 402 ------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKAKPFVVE-------- 440
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 441 ------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 493
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 494 RDVFYVTDLLGAQINA-PTRQAAIKS 518
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + + I+ +L + G
Sbjct: 501 DLLGAQINAPTRQAAIKSALTHVMAG 526
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T + LN+ A V+T + A ++FYVTD +G
Sbjct: 456 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLG 504
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V+V R G+L E L+L I A++++ G +DVF+VT
Sbjct: 828 PDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVT 887
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++T + I +++ + G
Sbjct: 888 DLTGTRVTQPDRQAAIRKAMLDVFAG 913
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T F LN+T A V+T + A+++FYVTD G
Sbjct: 843 VEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTDLTGT 892
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGS 169
+ G+T + + D LL+ + A ++V+A+++T +G I++
Sbjct: 723 DPVRGVTEITIYSPDHPRLLAIITGACAAAGSNIVDAQIFTTTDGFALDTIFISRAFERD 782
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
++ ++ RI A + LKG+ IR A + +A H F +P
Sbjct: 783 D-DELRRTKRITAAIERALKGE--IRIADL---VADKHPPTSARAKTFL------VP--- 827
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P V + N +VV V DR LL+++ + + A + T GERA
Sbjct: 828 -----PDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVD 882
Query: 290 EFYIRHIDGTPISSEPERQRVIQ 312
FY+ + GT + ++P+RQ I+
Sbjct: 883 VFYVTDLTGTRV-TQPDRQAAIR 904
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N+ T+++V R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 844 VIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDL 903
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
G K+ + I + L GR + +G ++
Sbjct: 904 TGQKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQ 939
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
RM R ++D V+ +W+D Y+V+ V DR LL+D+ + + + A I+T
Sbjct: 834 RMKAFRVASD--VIVNNSWSD-GYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTF 890
Query: 284 GERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
GER FY+ + G I++ + + + L AV R G
Sbjct: 891 GERVVDVFYVTDLTGQKIANVGRQDVIRERLRDAVEGRPEAG 932
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+TR LN+ A +ST + +++FYVTD G KI
Sbjct: 857 IEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDLTGQ----KIANVG 912
Query: 388 RQKI 391
RQ +
Sbjct: 913 RQDV 916
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVAKRTV--------------RSKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQINA-PTRQSAIKS 913
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++ N + T+++V+ R G+L + VL DL+L I A I++ G +D F+VT
Sbjct: 827 PSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+ +E+ I L+ +
Sbjct: 887 DLVGQKVVNENRQGNIAARLKAV 909
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + A ++ +A+++T +GR I + N
Sbjct: 721 RTDSFHAITEITVLAPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRALDTILI---NR 777
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
P+++ + + I + +VL G K + T + R F
Sbjct: 778 EFPVDEDELRRAGTISRMIEDVLSG------KKRLPEVIATRAKSRKRNKTF-------- 823
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
T P V + N ++V+ V+C DRT LL D+ L D+ + A I T GE
Sbjct: 824 ------TIPPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGE 877
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ FY+ + G + +E + + L+A + + E
Sbjct: 878 KVIDTFYVTDLVGQKVVNENRQGNIAARLKAVMSEQEDE 916
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 331 CMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQ 389
C+ DR GLLAD+T + L++ A ++T ++ ++ FYVTD +G K++ RQ
Sbjct: 846 CL-DRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVGQ----KVVNENRQ 899
>gi|254448782|ref|ZP_05062239.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
gi|198261623|gb|EDY85911.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
Length = 885
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 51/221 (23%)
Query: 222 YERMPV---LRHSTD----------------YPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
+E +P LRHS+D P+V ++ A R + V + +R
Sbjct: 656 WEELPTDYFLRHSSDEIAWHTQVILKTPEDKLPLVAIKERARRGGTPVFIYGHERDDFFA 715
Query: 263 DVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV--- 318
V T + + A I ++ + RA F + D +P+ S R+++ + + +A+
Sbjct: 716 HAVITFARIGLSIVDARILSSKDGRALDTFMVLEPDNSPVESPERREQITKAMHSALLNP 775
Query: 319 -------GRRASEGVR--------------------LELCMEDRQGLLADVTRTFRENGL 351
+R ++ +E+ DR GLLA + + F E
Sbjct: 776 AHVTEIPKQRIPNKLKHFDVKTRIHINSTSDNRFTVVEVMTADRPGLLARIGQAFIETDT 835
Query: 352 NVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+ A+++T ++ +IF+VTD+ P +DP +IE Q++
Sbjct: 836 RLHNAKINTIGEQVDDIFFVTDDDNQPLSDPNVIEHFTQRL 876
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ I++ T+V+V +A R G+L Q + + + A I++ G D+F VTD
Sbjct: 798 RIHINSTSDNRFTVVEVMTADRPGLLARIGQAFIETDTRLHNAKINTIGEQVDDIFFVTD 857
Query: 84 LNGNKLTDESVISYIEQSLE 103
+ L+D +VI + Q L+
Sbjct: 858 DDNQPLSDPNVIEHFTQRLQ 877
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|85710052|ref|ZP_01041117.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
gi|85688762|gb|EAQ28766.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
Length = 924
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V DN+ T+++V + R +L L NL+++ A+I++ G D F+V
Sbjct: 829 APQVNFDNSASNHFTVIEVTARDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYV 888
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+K+T ++ IE SL
Sbjct: 889 TDLTGSKVTAPERLAEIEASL 909
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 31/264 (11%)
Query: 65 KAYISSD-GRFFMDVFHVT---DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
KAY+ G D F + D+ L IE+ L +IH + G T +
Sbjct: 678 KAYLVEQVGEILADAFWIAEPVDIIAKNLIQYEEARRIEEHL-SIHC-EVDEERGATLVS 735
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDR 179
+ D GL + + ++++A++ T NG V+D ++ P + QI R
Sbjct: 736 VIAADHPGLFYRIAGGIHLAGANIIDARIHTALNGYAIDNFLVQDLHA-KPFREETQIAR 794
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
++ +R+ L ++ + + H+ + + P V
Sbjct: 795 LKQGIRDALLAQVEL--VPKLAARPLAHSRAKAFAVA------------------PQVNF 834
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGT 299
N A ++V+ V +DR LL + L +V A I GE A FY+ + G+
Sbjct: 835 DNSASNHFTVIEVTARDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYVTDLTGS 894
Query: 300 PISSEPERQRVIQC--LEAAVGRR 321
+++ PER I+ L+AA +R
Sbjct: 895 KVTA-PERLAEIEASLLDAASDQR 917
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T L L D GL + A L ++V+AK++T +G +++V+D G I +
Sbjct: 727 VTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPE-GLAISEQ 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++I R+E +R VL G+ I + S +
Sbjct: 786 RRIIRLEEMIRKVLSGE--ISAPDAIESRTRRERRAEAFSVA------------------ 825
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A Y+V+ V DR L+ + L + + A I T GERA FY++
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVK 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G +++ +++ V + L A+
Sbjct: 886 DVIGHKVTNANKKKAVERHLLEALA 910
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V IDN T+++V+ R G++ + L L L I A+I++ G +DVF+V
Sbjct: 825 APQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYV 884
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G+K+T+ + +E+ L
Sbjct: 885 KDVIGHKVTNANKKKAVERHL 905
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 23/194 (11%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ F G T + + D+ + A + L ++ +A++ T + + Y+ G+
Sbjct: 698 QHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGA 757
Query: 170 PI-EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
PI D ++I I L L+ D +++ H R+L F
Sbjct: 758 PIGNDPERIQEIRQGLTEALRNPEDY------LTIIKRHVPRQLKHFAFP---------- 801
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VT+ N R +++ V DR LL + + + V +A I T GER
Sbjct: 802 ------PQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVE 855
Query: 289 LEFYIRHIDGTPIS 302
F++ + D P+S
Sbjct: 856 DVFFVTNADNQPLS 869
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T+++V + R G+L Q+ + +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
+ + L+D + + ++Q+L
Sbjct: 862 NADNQPLSDLQLCTQLQQAL 881
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A +A L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D + +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRTPEDYPAI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ +IQ L+A AS
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIIQQLQAGQASEAS 894
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 218 ADRDYERMPVLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEY 273
AD + +L+ D P+V ++ R + + + + D+ V + +
Sbjct: 671 ADVAWHSDAILQQPADSGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNL 730
Query: 274 VVFHATINTAGERAYLEFYI-RHIDGTPISSEPERQRVI-----------QCLEAAVGRR 321
+ A I T+ + L+ YI DG I P+R + I + A + RR
Sbjct: 731 NIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRR 790
Query: 322 ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
++ LE+ DR GLLA + R F E +++ A+++T
Sbjct: 791 VPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATL 850
Query: 362 RDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+ ++F++TD P +DP++ +++ I
Sbjct: 851 GERVEDVFFITDADNQPLSDPQLCSRLQEAI 881
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + ++ ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 95 ISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNG 154
IS E +L+ + + G T ++ DR GL S + + +++ A+V+T +
Sbjct: 715 ISEHENALQPVVDWHNEPDRGYTVAKICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSD 774
Query: 155 RIA-SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
I YV D +G+ + + ++ +++E L VL GD V+ ++R++
Sbjct: 775 AIVLDTFYVTDARTGA-LANREEKEKLEELLNKVLTGDE--------VNFRALIAKQRVN 825
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
+ ++ + ++MP H N S + + V+ +DR LL+ + L ++E
Sbjct: 826 RPLYQSYEGDQMPTQLH--------FDNETSESRTAIEVETEDRIGLLYAISEALAELEL 877
Query: 274 VVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQ 312
+ A I T A FY+ +DG+ I +P RQ ++
Sbjct: 878 NISAAKIVTEKGAAIDTFYVNELDGSKI-LDPGRQSFVE 915
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 37/162 (22%)
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTD----------------------LNGNKLTDESVIS 96
LN+L + + SD +D F+VTD L G+++ ++I+
Sbjct: 762 LNILTAQVFTRSDA-IVLDTFYVTDARTGALANREEKEKLEELLNKVLTGDEVNFRALIA 820
Query: 97 Y------IEQSLE------TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+ QS E +H+ S TA+E+ DR+GLL + LA+L+ ++
Sbjct: 821 KQRVNRPLYQSYEGDQMPTQLHFDNETS-ESRTAIEVETEDRIGLLYAISEALAELELNI 879
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
AK+ T G YV + + GS I D + +E ++R+
Sbjct: 880 SAAKIVTEKGAAIDTFYVNELD-GSKILDPGRQSFVERKIRD 920
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
DN + T ++V++ R G+L + L +L L I A I ++ +D F+V +L+G
Sbjct: 843 FDNETSESRTAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYVNELDG 902
Query: 87 NKLTDESVISYIEQSL 102
+K+ D S++E+ +
Sbjct: 903 SKILDPGRQSFVERKI 918
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 329 ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDE-ALNIFYVTD 373
++C DR GL +++ +F GLN+ A+V T D L+ FYVTD
Sbjct: 740 KICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSDAIVLDTFYVTD 785
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ EDR GLL ++ E LN++ A++ TE+ A++ FYV + G+ KI++
Sbjct: 854 IEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYVNELDGS----KILDPG 909
Query: 388 RQKI 391
RQ
Sbjct: 910 RQSF 913
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T L + D LLS + A ++V+A+++T +GR I + ++
Sbjct: 736 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDE-DE 794
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+++ RI + VL+G K+ ++A T + H+ +
Sbjct: 795 ARRATRIGETIEQVLEG-----KLKLPDAVARRTTRGKQHKAFSVE-------------- 835
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P VT+ N Y+V+ V DR LL+++ ++ + + A + T GERA FY+
Sbjct: 836 -PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYV 894
Query: 294 RHIDGTPISSEPERQRVIQ 312
+ G IS+ P RQ I+
Sbjct: 895 TDLLGAQISA-PTRQAAIK 912
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G +++ + + I+ +L
Sbjct: 896 DLLGAQISAPTRQAAIKSTL 915
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T + LN+T A V+T + A ++FYVTD +G
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTDLLG 899
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL V + ++++A++ T +A ++ G
Sbjct: 726 GATLVTVYAADHPGLFYRVAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFHSP 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+Q+ RI + + + L + ++ +A R R R
Sbjct: 786 EQLKRIRSAIEDSLSNRH-----RLITKLAARPLPR------------TRAEAFRIE--- 825
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LLF + L + V A + T GERA FYI
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVR 327
+ G I S+ Q + + L AA G E ++
Sbjct: 886 DLIGGKIESKARLQTLERRLLAAAGGEVGEALQ 918
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F++T
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 886 DLIGGKIESKARLQTLERRL 905
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ S + LA + +VV+A+ +T +G ++ +V+D + G P D ++ R+
Sbjct: 747 SDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGD-GHPY-DPHKLPRLRG 804
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ +L+G+ R T ++ +RD+ R+P + N
Sbjct: 805 TIGKILRGEVIAREGLDTRD-----------KIKKRERDF-RVPT--------SIAFDNE 844
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y++V V +DR LL+D+ TL + A I T G + FY++ + G I
Sbjct: 845 GSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFGLKIY 904
Query: 303 SEPERQRVIQCLEAAV 318
S+ ++ + + L A+
Sbjct: 905 SDAKQAALERKLREAI 920
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+V+VD+ R G+L + + L ++ I A I++ G +D F+V D+
Sbjct: 839 IAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDM 898
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNSFN 114
G K+ ++ + +E+ L E I G + + N
Sbjct: 899 FGLKIYSDAKQAALERKLREAIDSGAARARN 929
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N++ T+V++ R G+L + + ++ LNL I A+I++ G +DVF+VTDL
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 85 NGNKLTDESVISYIEQSLE 103
G K+ + I + LE
Sbjct: 906 TGQKIANIGRQEIIRERLE 924
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V V N Y+VV + DR LLFD+ ++ + + A I T GE+ FY+ +
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 297 DGTPISSEPERQRVIQCLEAAVG 319
G I++ ++ + + LEAAVG
Sbjct: 906 TGQKIANIGRQEIIRERLEAAVG 928
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL D+TR LN+ A ++T ++ +++FYVTD G KI
Sbjct: 859 VEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQ----KIANIG 914
Query: 388 RQKI 391
RQ+I
Sbjct: 915 RQEI 918
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 22 TPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMD 77
TP V+I + + + + +A +H V + LNL I+ A I+S +F +D
Sbjct: 688 TPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLD 747
Query: 78 VFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG-------R 109
+ V D +G+ + + I+ I + L + H+
Sbjct: 748 TYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIS 807
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + S + + D+ V + + + A I T
Sbjct: 680 ILQHPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I + PER + +I L+ + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + F + L+V A+++T + ++FY
Sbjct: 800 FAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFY 859
Query: 371 VTDEMGNP-ADPKI 383
+TD P ADP +
Sbjct: 860 ITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F + + + D+ + A + L S+ +A++ T + Y V D + S
Sbjct: 701 FESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L + LK +D T +RR+ + L+H
Sbjct: 761 NNPERIAEIREGLIDALKNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
YI P++
Sbjct: 859 YITDARNQPLA 869
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 805 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 864
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G K+ + V R F
Sbjct: 865 ------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKARPFVIE-------- 903
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 904 ------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 956
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 957 RDVFYVTDLLGAQINA-PTRQSAIK 980
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 964 DLLGAQINAPTRQSAIKSALTHVMAG 989
>gi|357503149|ref|XP_003621863.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
gi|355496878|gb|AES78081.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 170/411 (41%), Gaps = 54/411 (13%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSP------IEDSQQIDRIEARLRNVLK------GDNDIR 195
V T +GR L ++ D S IE +++ + R +V + G+ I
Sbjct: 140 VMPTPDGRALDLFFITDEIEKSVYLVYALIETLKELFHTKERRDDVCQYLSEALGERCIS 199
Query: 196 SAKMTVSMAVTHTE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWAD 244
S H + + +F +++ + S D P VTV N
Sbjct: 200 SELQLAGPEYGHLQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLS 259
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER-AYLEFYIRHIDGTPISS 303
++++ +QC D+ L +D++ D + V + N++ + ++ +++ +
Sbjct: 260 SVHTLLQIQCVDQKSLCYDLMRISKDSDIKVAYGRFNSSAKGFQNIDLFVQQKEDGQKII 319
Query: 304 EPER---------QRVIQCLEAAVGRRASE-----GVRLELCMEDRQGLLADVTRTFREN 349
+PER + ++ L + R + +EL + R + DVT +
Sbjct: 320 DPERLKTLCTCLKEEMLHPLRVIIVNRGPDIELLVANPVELSGKGRPRVFYDVTLALKAL 379
Query: 350 GLNVTRAEV----STERDEALNIFYVTDEMGNP-----ADPKIIEAVRQKI 391
G+ + AEV + ER + F + + P A +I++ VR+ +
Sbjct: 380 GVFIFSAEVVRHSTQERQWEVYRFLLDESRDFPLNSSKARSQIVDKVRRTL 430
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+VVIDN ++++V +A G L Q + D L I KAYI+++ +DVF+V
Sbjct: 562 ASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYV 621
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D G KL DE + Q L
Sbjct: 622 LDSRGRKLVDEDFRHEVTQGL 642
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 42/210 (20%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLL+++ V+A +VV+A+++T +G + +I V+ + S E
Sbjct: 471 DRPGLLAKICGVMALNNLTVVKAQIFTWADGTVVDVIDVRSMDGLSFAE----------- 519
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY--------- 234
KG RS + +A+ H +M + R Y ++ S+ Y
Sbjct: 520 -----KG---WRSLNEQLDLAIEH------RMGLSHRLYRKL-----SSGYGRRSQMVGE 560
Query: 235 --PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V + N + YSV+ V D L+ + + D + A I T E+ FY
Sbjct: 561 VASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFY 620
Query: 293 IRHIDGTPISSEPERQRVIQCLEAAVGRRA 322
+ G + E R V Q L ++GR +
Sbjct: 621 VLDSRGRKLVDEDFRHEVTQGLLHSIGRES 650
>gi|189425747|ref|YP_001952924.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
gi|189422006|gb|ACD96404.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
Length = 900
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G ++ + D GL S++ V+A +++ A+++T NG+I ++ V G I
Sbjct: 710 SGFSSFTICTFDTHGLFSKITGVMAANGINILGAQIFTGKNGKILDILQVNSAQ-GFLIT 768
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHS 231
D+ + ++EA + +VL G TV ++ + H RR + + P
Sbjct: 769 DAARWQKVEADMADVLHG---------TVQVSDLVH--RRQRPTLLPAKSARHFPTR--- 814
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
+ + N Y+V+++ D+ LL+ + T+ + + + I+T ++ F
Sbjct: 815 -----IEIDNEVSDEYTVIDIYAHDKVGLLYLITSTINQLGLYIGVSKISTKVDQVADVF 869
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAV 318
Y+R I G I +E + + + L A+
Sbjct: 870 YVRDIFGHKIFAEDKLEEIRTSLSWAI 896
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RGKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ + DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G IS+ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQISA-PTRQSAIK 912
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T++++ R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G +++ + S I+ +L + G
Sbjct: 896 DLLGAQISAPTRQSAIKSALTHVMAG 921
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T + LN+ A V+T + A ++FYVTD +G
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLG 899
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RSKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQINA-PTRQSAIK 912
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 30/168 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + +A +H V V+ LNL I+ A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYGRSNSFNGLT-------ALELTGTD 125
I+ I L + H+ S N T +ELT D
Sbjct: 764 ARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYTDTMRSASLIELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
R GLL+ V + D SV+ AK+ T R+ + YV D + G P+ D
Sbjct: 824 RPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDAD-GRPLAD 870
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+EL DR GLLA V R F + L+V A+++T + ++FYVTD G P ADP + A
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDADGRPLADPGLCSA 876
Query: 387 VRQKIGLSNLKVKELPMIYHQKGESEEQT 415
++ + +K+L GE + QT
Sbjct: 877 LQHAL------IKQL-------GEPDSQT 892
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+P+V I +A+L+++ + R G+L ++ D +L + A I++ G DVF+V
Sbjct: 801 SPQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD +G L D + S ++ +L
Sbjct: 861 TDADGRPLADPGLCSALQHAL 881
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 23/189 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPIED 173
G T + + D+ + AV+ L ++ +A++ T + Y V D + GS +
Sbjct: 703 GGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIGNN 762
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+I +I L LK + S ++ VT R+L F+
Sbjct: 763 PARIAQIRGGLIEALKHPEEYPS---IINRRVT---RQLKHFAFS--------------- 801
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + RS S++ + DR LL V D + V +A I T GER FY+
Sbjct: 802 -PQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYV 860
Query: 294 RHIDGTPIS 302
DG P++
Sbjct: 861 TDADGRPLA 869
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RSKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQINA-PTRQSAIK 912
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 32/227 (14%)
Query: 90 TDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
T + + I +S +++ G S F + D L S L L ++++A++
Sbjct: 680 TPDDPLVLIRESSQSVLAGGSQIF-------IYTPDTRNLFSATVNALDSLGLTIMDARI 732
Query: 150 WTHNGRIASLIYVKDCNSGSPI-EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT 208
T + Y+ G+PI ED +I++I L LK H
Sbjct: 733 ITSADGFSLDTYIVLDEHGTPIGEDLARIEQIRKTLTETLK-----------------HP 775
Query: 209 ERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
ER FA RMP D P V + N + V++Q DR LL +
Sbjct: 776 ER------FATTVSRRMPRRNKHFDVPTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRI 829
Query: 268 LTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCL 314
E +V +A I T GE+A F+I ++G P+S Q++ Q L
Sbjct: 830 FMRFELLVQNARIATLGEKAEDVFFITDLNGEPVSDPALCQQLQQTL 876
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVI N + T V + + R G+L ++ LL++ A I++ G DVF +TD
Sbjct: 798 RVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITD 857
Query: 84 LNGNKLTDESVISYIEQSL 102
LNG ++D ++ ++Q+L
Sbjct: 858 LNGEPVSDPALCQQLQQTL 876
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLLA + R F L V A ++T ++A ++F++TD G P +DP + + ++Q +
Sbjct: 818 DRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITDLNGEPVSDPALCQQLQQTL 876
>gi|335419074|ref|ZP_08550132.1| (Protein-PII) uridylyltransferase [Salinisphaera shabanensis E1L3A]
gi|334897209|gb|EGM35345.1| (Protein-PII) uridylyltransferase [Salinisphaera shabanensis E1L3A]
Length = 890
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
H D P+V+V +D+ S + V +DR L L + + A INT + L
Sbjct: 689 HDGDGPLVSVAEISDQG-STLFVYTRDRNYLFGVATGVLAQLGLSILDARINTTNDDYTL 747
Query: 290 EFY-IRHIDGTPISSEPERQRVIQCLEAAVG----------RRASEGVR----------- 327
+ Y I DG PI R+ + + AA+ RRAS R
Sbjct: 748 DTYVICESDGHPIKDAYRRREIEDTVRAAIANPEVESIDVTRRASRRSRYFNVPTQIYFS 807
Query: 328 ---------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
+E+ DR GLL+ + TF G+ + A+++T + A ++F++TD P
Sbjct: 808 ETPERACTIMEVVTADRPGLLSLIGDTFYRFGILLETAKIATIGERAEDVFFITDREHTP 867
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR L VLA L S+++A++ T N YV + G PI+D+ + IE +
Sbjct: 714 DRNYLFGVATGVLAQLGLSILDARINTTNDDYTLDTYVICESDGHPIKDAYRRREIEDTV 773
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
R + S+ VT R + Y +P + ++ P +
Sbjct: 774 RAAIANPE-------VESIDVTRRASRRSR-------YFNVPTQIYFSETP--------E 811
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
R+ +++ V DR LL + T ++ A I T GERA F+I + TPI
Sbjct: 812 RACTIMEVVTADRPGLLSLIGDTFYRFGILLETAKIATIGERAEDVFFITDREHTPIRDR 871
Query: 305 PERQRVIQCL 314
R R+ + L
Sbjct: 872 ETRSRLRETL 881
>gi|224028845|gb|ACN33498.1| unknown [Zea mays]
gi|413950198|gb|AFW82847.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 516
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 37/309 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRNVLKGD-NDIRSAK 198
+ KV T +GR+ L ++ D ++ Q+ + A L + + +
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITDGMELLHRKERQEETCSALTATLGPSISCEVVPAEGFQ 281
Query: 199 MTVSMAVTHTERRLHQMMFADRDYE--RMPV---LRHSTDYPVVTVQNWADRSYSVVNVQ 253
S L + AD D E P+ LR V N ++++V +
Sbjct: 282 QGFSSLPPEIAEELFRAELADTDSEVCSSPLSAELRKVRTTATVNFDNSLSPAHTLVQIV 341
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFH----------ATINTAGERAYLEFYIRHIDGTPISS 303
C D+ L++D++ T+ D +F+ A+ ++G R ++ +++ +DG + +
Sbjct: 342 CADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSASKGSSGCRE-VDLFVKQVDGKKV-T 399
Query: 304 EPERQRVIQ 312
+P +Q ++
Sbjct: 400 DPAKQDALR 408
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V+++N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGARITAPTRQAAIKRAL 916
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 39/207 (18%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D + I S
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYT----------TTDGQALDTIAIS 786
Query: 175 QQIDRIE------ARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++ DR E AR+ +++ D +R + A T
Sbjct: 787 REYDRDEDEGRRAARIGEIIEQVIDGRLRLPDVVARRAAGKTR----------------- 829
Query: 227 VLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
LR P V V N W+DR ++V+ V DR LLF + ++ + + A + T GE
Sbjct: 830 -LRPFVVEPKVIVNNQWSDR-HTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGE 887
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQ 312
RA FY+ + G I++ P RQ I+
Sbjct: 888 RARDVFYVTDLLGARITA-PTRQAAIK 913
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ DR GLL +T + LN+ A V+T + A ++FYVTD +G +I
Sbjct: 852 IEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDLLG----ARITAPT 907
Query: 388 RQKIGLSNLKVKELPMIYHQKGESEEQTVG 417
RQ +K + G + EQ+VG
Sbjct: 908 RQA------AIKRALIHLLANGGAAEQSVG 931
>gi|255575072|ref|XP_002528441.1| amino acid binding protein, putative [Ricinus communis]
gi|223532117|gb|EEF33924.1| amino acid binding protein, putative [Ricinus communis]
Length = 420
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 153/360 (42%), Gaps = 41/360 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLN-GNKLTDESV 94
T+V V+ + G+ + +++ + L I +A S+DGR+ VF V + +K+ +S+
Sbjct: 22 TVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHSTSHKVNWDSL 81
Query: 95 ISYIE----QSLETIHYGRSN---SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
+ + L ++ + + S L L+ DR GLL +V +L +L+ ++
Sbjct: 82 KNRLSCASPPCLGPFYFDQKSNVTSVPSLYLLKFCFVDRKGLLHDVAKILTELEFTIQRV 141
Query: 148 KVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR-LRNVLK----------GDNDIR 195
KV T +G++ L ++ D G + +++ R L +V K +
Sbjct: 142 KVMTTPDGKVVDLFFITD---GLDLLHTEKRRSDTCRHLASVFKECCISCELQLAGPEYE 198
Query: 196 SAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCK 255
S + S+ + E ++ + D VTV N +++++ ++C
Sbjct: 199 SLQAFSSLPLPIAEELFSCEQLEEKTCSQALCTDTIADKATVTVDNNMSPAHTLLQLKCI 258
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTA--GERAYLEFYIRHIDGTPISSEPERQ----- 308
D+ L +D++ T D V + +++ G R ++ +I+ DG I +P+ Q
Sbjct: 259 DQKGLFYDILRTSKDCNIRVAYGRFSSSLKGYRN-MDLFIQQTDGKKI-MDPKHQLMLCS 316
Query: 309 ----RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
+++ + R + L EL + R + DVT + G+ + AE++
Sbjct: 317 RLKAEMLRPFRVIIANRGPDTELLVANPVELSGKGRPRVFYDVTLALKTLGICIFSAEIA 376
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI-RHIDGTPISSEPE 306
+VV V C D+ L D+ + + + A +T G Y+ F++ H ++ +
Sbjct: 22 TVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHSTSHKVNWDSL 81
Query: 307 RQRV----IQCLEAAVGRRASEGVR------LELCMEDRQGLLADVTRTFRENGLNVTRA 356
+ R+ CL + S L+ C DR+GLL DV + E + R
Sbjct: 82 KNRLSCASPPCLGPFYFDQKSNVTSVPSLYLLKFCFVDRKGLLHDVAKILTELEFTIQRV 141
Query: 357 EVSTERD-EALNIFYVTDEM 375
+V T D + +++F++TD +
Sbjct: 142 KVMTTPDGKVVDLFFITDGL 161
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G ++ + D GL S + V+A +++ A + T+ NG++ ++ V + G I D
Sbjct: 709 GFSSFTICTFDTPGLFSMITGVMAANGMNILGAHILTNLNGKVLDVLQV-NSPQGFVITD 767
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ R+E +R VL+G I + ++R A++ + P
Sbjct: 768 EARWQRVEDDMRQVLEGKTKIAAL----------VKKRHRAAFLAEKAKPKFPTR----- 812
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
V + N Y+V+++ D+ LL+ + L+++ + + ++T ++ FY+
Sbjct: 813 ---VEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYV 869
Query: 294 RHIDGTPISSEPE----RQRVIQCLEAA 317
+ I G I + + R R++Q ++ A
Sbjct: 870 KDIFGQKILDQDKLEEIRGRLLQSIDEA 897
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L L++L L I + +S+ DVF+V D
Sbjct: 812 RVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKD 871
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G K+ D+ + I L
Sbjct: 872 IFGQKILDQDKLEEIRGRL 890
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGARITAPTRQTAIKRAL 914
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D
Sbjct: 736 GVTELTILAADHPWLLSIIAGACASAGANIVDAQIYT-------------------TTDG 776
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMT-VSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q +D I D R+ ++ + V RL ++ + +R LR
Sbjct: 777 QALDTIAISREYEHDEDEGRRATRIAEIIEQVLEGRLRLPDVVPSRAGGKR---LRPFVV 833
Query: 234 YPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P VT+ N W+DR ++++ V DR LLF + ++ + + A + T GERA FY
Sbjct: 834 EPKVTINNQWSDR-HTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFY 892
Query: 293 IRHIDGTPISSEPERQRVIQ 312
+ + G I++ P RQ I+
Sbjct: 893 VTDLLGARITA-PTRQTAIK 911
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGARITAPTRQAAIKRAL 914
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D + I S
Sbjct: 736 GVTELTILAADHPWLLSIIAGACASAGANIVDAQIYT----------TTDGQALDTIAIS 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMT-VSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
++ +R E D R+A++ + V RL +M + +R LR
Sbjct: 786 REYERDE---------DEGRRAARIAEIIEQVLEGRLRLPDVMPSRAAGKR---LRPFVV 833
Query: 234 YPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P VT+ N W+DR ++++ V DR LLF + ++ + + A + T GERA FY
Sbjct: 834 EPKVTINNQWSDR-HTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFY 892
Query: 293 IRHIDGTPISSEPERQRVIQ 312
+ + G I++ P RQ I+
Sbjct: 893 VTDLLGARITA-PTRQAAIK 911
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R+ +++ + DR LL + + + + +A I T GER F
Sbjct: 799 NFPPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ ++Q L+A AS
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DR LL+D+ TL + A I T G + FY++ + G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLK 903
Query: 301 ISSEPERQRVIQCLEAAV 318
+ + ++ + + L A+
Sbjct: 904 LHQKNRQETLEKKLRQAI 921
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G +R ++ V R R V+
Sbjct: 797 ------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RGKARPFVI 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ + DR LL+++ ++ + + A + T GERA
Sbjct: 835 E-----PEVTINNQWSDR-YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 888
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G IS+ P RQ I+
Sbjct: 889 RDVFYVTDLLGAQISA-PTRQAAIK 912
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T++++ R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G +++ + + I+ +L + G
Sbjct: 896 DLLGAQISAPTRQAAIKSALTHVMAG 921
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ DR GLL ++T + LN+ A V+T + A ++FYVTD +G
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLG 899
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 24/195 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A +A L ++ +A++ T + Y V + GS
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++I +I L + L ++ S +RR+ + L+H
Sbjct: 761 DNPKRIQQIRQSLIDTLMHPDEYPSI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +VV + DR LL + D + V +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE 306
++ D P+ S+PE
Sbjct: 859 FVTDADNQPL-SDPE 872
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 37/202 (18%)
Query: 227 VLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+LRH D P+V ++ R + + + + D+ V + + + A I T
Sbjct: 680 ILRHPDDGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-QRVIQCL----------EAAVGRRASEGVR--- 327
+ + L+ YI +G I P+R Q++ Q L + + RR ++
Sbjct: 740 STSQFTLDTYIVLEAEGGSIGDNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
+EL DR GLLA + R F + L+V A+++T + ++F+
Sbjct: 800 FAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
VTD P +DP++ ++Q I
Sbjct: 860 VTDADNQPLSDPELCARLQQTI 881
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 11 DEYEKLVIR---------MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
DEY ++ R P+V I N T+V++ + R G+L + ++ D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
++ A I++ G DVF VTD + L+D + + ++Q++ T
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVT 883
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DR LL+D+ TL + A I T G + FY++ + G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLK 903
Query: 301 ISSEPERQRVIQCLEAAV 318
+ + ++ + + L A+
Sbjct: 904 LHQKNRQETLEKKLRQAI 921
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|297846574|ref|XP_002891168.1| hypothetical protein ARALYDRAFT_891164 [Arabidopsis lyrata subsp.
lyrata]
gi|297337010|gb|EFH67427.1| hypothetical protein ARALYDRAFT_891164 [Arabidopsis lyrata subsp.
lyrata]
Length = 91
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 15/76 (19%)
Query: 271 MEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLEL 330
MEY VFHATI TA ++ +LE ERQRVI CLEAAV RRA + +L L
Sbjct: 1 MEYAVFHATITTAEDQVHLEV--------------ERQRVILCLEAAVERRALDLEKL-L 45
Query: 331 CMEDRQGLLADVTRTF 346
R L+AD+ T+
Sbjct: 46 ERTRRDCLIADIFFTW 61
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 756 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 813
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 814 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 851
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DR LL+D+ TL + A I T G + FY++ + G
Sbjct: 852 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLK 911
Query: 301 ISSEPERQRVIQCLEAAV 318
+ + ++ + + L A+
Sbjct: 912 LHQKNRQETLEKKLRQAI 929
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 848 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 907
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 908 FGLKLHQKNRQETLEKKL 925
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DR LL+D+ TL + A I T G + FY++ + G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLK 903
Query: 301 ISSEPERQRVIQCLEAAV 318
+ + ++ + + L A+
Sbjct: 904 LHQKNRQETLEKKLRQAI 921
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDAE-GSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+ LKG+ R A RD +++ +P + N
Sbjct: 806 MIDKTLKGEVVAREAL---------------------RDRDKVKKRESQFRFPTHIAFDN 844
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
Y+++ V +DR LL+D+ TL + A I T G + FY++ + G +
Sbjct: 845 EGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKL 904
Query: 302 SSEPERQRVIQCLEAAV 318
+ ++ + + L A+
Sbjct: 905 HQKTRQETLEKKLRQAI 921
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKTRQETLEKKL 917
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DR LL+D+ TL + A I T G + FY++ + G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLK 903
Query: 301 ISSEPERQRVIQCLEAAV 318
+ + ++ + + L A+
Sbjct: 904 LHQKNRQETLEKKLRQAI 921
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 761 NNPERIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCL 314
++ D P+S R+ Q L
Sbjct: 859 FVTDADNQPLSDPQFCLRLQQAL 881
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+V ++ R + + + + D+ V + + + A I T+ + L+
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 292 YI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGVR------------ 327
YI DG+PI + PER + + L AA + RR ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
LE+ DR GLLA V + F + L+V A+++T + ++F+VTD P
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 379 ADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
+DP+ ++Q + VKEL + E+E+Q
Sbjct: 869 SDPQFCLRLQQAL------VKEL------QQENEQQ 892
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 724 GATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFHSP 783
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 784 EQLARIKAAIEDSLSNRHRM----------ITKLEAR--------------PLPRTRAEA 819
Query: 235 ----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 820 FRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDT 879
Query: 291 FYIRHIDGTPISSEPERQRV-IQCLEAAVG 319
FY+ + G I S+ Q + + LEAA G
Sbjct: 880 FYVTDLLGGKIESKARLQTLERRLLEAAGG 909
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 884 DLLGGKIESKARLQTLERRL 903
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 698 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 757
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 758 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 795
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 796 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 855
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRASE 324
+I D P+ S+P+ ++ ++Q L+A G S+
Sbjct: 856 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQGSDTSQ 892
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 387 VRQKI 391
+++ I
Sbjct: 874 LQEAI 878
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 799 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 858
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 859 DADNQPLSDPQLCSRLQEAI 878
>gi|402820021|ref|ZP_10869588.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
gi|402510764|gb|EJW21026.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
Length = 973
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+IDN V +T+++V R G+L + L +LN+ I A + G +DVF+V DL
Sbjct: 861 VMIDNDVSSHSTVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAVTFGERAVDVFYVQDL 920
Query: 85 NGNKLTDESVISYIEQSLETI 105
G K+T +S ++ I SL+ +
Sbjct: 921 TGEKVTRKSKLTAIMDSLQMV 941
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 761 NNPKRIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCL 314
++ D P+S R+ Q L
Sbjct: 859 FVTDADNQPLSDPQFCLRLQQAL 881
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 48/216 (22%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+V ++ R + + + + D+ V + + + A I T+ + L+
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 292 YI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGVR------------ 327
YI DG+PI + P+R + + L AA + RR ++
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
LE+ DR GLLA V + F + L+V A+++T + ++F+VTD P
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 379 ADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
+DP+ ++Q + VKEL + E+E+Q
Sbjct: 869 SDPQFCLRLQQAL------VKEL------QQENEQQ 892
>gi|387770803|ref|ZP_10126978.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
gi|386903553|gb|EIJ68363.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIR 294
VV V N + + + CKD+ L + V C +++ + + A I T+ + A+ F +
Sbjct: 670 VVKVSNRFSSGGTGIFIYCKDQPSLFYKVACVISNKKLSIHDAQIMTSLDGYAFDTFIVT 729
Query: 295 HIDGTPISSEPERQ---RVIQCLEA------------------------AVGRRASEGVR 327
IDG+ ++ + R+ +++ L++ + +
Sbjct: 730 EIDGSLLNFDRRRKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVTTEVRFLNTIKNTHTE 789
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+EL D+ GLLADV+R F E+ LN+ A+++T ++ + F +T+
Sbjct: 790 MELYALDKTGLLADVSRIFSEHNLNIQNAKITTVGEKVEDFFILTN 835
>gi|334142818|ref|YP_004536026.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
gi|333940850|emb|CCA94208.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
Length = 918
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A++++ G D F+VT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT S + +E+ L
Sbjct: 885 DLLGEKLTATSRLKALERRL 904
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G T + + +D GL + + ++++A++ T GR V+D G P
Sbjct: 724 HGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLVQDP-LGRPFM 782
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ Q++R+ + N L N I+ + V + R F R
Sbjct: 783 EESQLERLRTSIENALA--NRIK----ILPQLVAKPDARPRADAFEVR------------ 824
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V N A ++VV V +DR LL + L + + +V+ A + T GERA FY
Sbjct: 825 --PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFY 882
Query: 293 IRHIDGTPISS 303
+ + G +++
Sbjct: 883 VTDLLGEKLTA 893
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 726 GATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFHSP 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 786 EQLARIKAAIEDSLSNRHRM----------ITKLEAR--------------PLPRTRAEA 821
Query: 235 ----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 822 FRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDT 881
Query: 291 FYIRHIDGTPISSEPERQRV-IQCLEAAVG 319
FY+ + G I S+ Q + + LEAA G
Sbjct: 882 FYVTDLLGGKIESKARLQTLERRLLEAAGG 911
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 886 DLLGGKIESKARLQTLERRL 905
>gi|413950197|gb|AFW82846.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 543
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 37/309 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRNVLKGD-NDIRSAK 198
+ KV T +GR+ L ++ D ++ Q+ + A L + + +
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITDGMELLHRKERQEETCSALTATLGPSISCEVVPAEGFQ 281
Query: 199 MTVSMAVTHTERRLHQMMFADRDYE--RMPV---LRHSTDYPVVTVQNWADRSYSVVNVQ 253
S L + AD D E P+ LR V N ++++V +
Sbjct: 282 QGFSSLPPEIAEELFRAELADTDSEVCSSPLSAELRKVRTTATVNFDNSLSPAHTLVQIV 341
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFH----------ATINTAGERAYLEFYIRHIDGTPISS 303
C D+ L++D++ T+ D +F+ A+ ++G R ++ +++ +DG + +
Sbjct: 342 CADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSASKGSSGCRE-VDLFVKQVDGKKV-T 399
Query: 304 EPERQRVIQ 312
+P +Q ++
Sbjct: 400 DPAKQDALR 408
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVMQPDRLAMIRAAV 900
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T LN+T A V+T + A+++FYVTD G
Sbjct: 836 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGT 885
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T L + D LL+ + A ++V+A+++T D +
Sbjct: 717 TDPVRGVTELTVYSPDHPRLLAIITGACATTGGNIVDAQIFT----------TTDGFALD 766
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDI-RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
I S+ +R E LR + I R+ K + +A + AD+ ++ P
Sbjct: 767 SIFISRAFERDEDELRRASRIATAIERALKGEIKIA----------ELVADKHPKQPP-- 814
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ P V++ N +VV + DR LL+++ L + + A + T GERA
Sbjct: 815 KTFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAV 874
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + GT + +P+R +I+
Sbjct: 875 DVFYVTDLTGTRV-MQPDRLAMIRA 898
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 547 PDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT 606
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 607 DLTGTRVMQPDRLAMIRAAV 626
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T LN+T A V+T + A+++FYVTD G
Sbjct: 562 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGT 611
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V++ N +VV + DR LL+++ L + + A + T GERA FY+
Sbjct: 547 PDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT 606
Query: 295 HIDGTPISSEPERQRVIQC 313
+ GT + +P+R +I+
Sbjct: 607 DLTGTRV-MQPDRLAMIRA 624
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D G P E + ++ R+
Sbjct: 725 ADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDAFWIQDAE-GHPYE-AARLPRLSQ 782
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A + D+ +R T +T N
Sbjct: 783 MILKTLKGEVVARDA-----------------LKSRDKIKKREKAFNVPTH---ITFDNE 822
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL+D+ L + +A I T GE+ FY++ + G
Sbjct: 823 GSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYH 882
Query: 303 SEPERQRVIQC 313
SE +QR ++
Sbjct: 883 SEA-KQRTLET 892
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 802 DKIKKREKAFNVPTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIA 861
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K E+ +E L
Sbjct: 862 TYGEQVVDSFYVKDMFGLKYHSEAKQRTLETKL 894
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRASE 324
+I D P+ S+P+ ++ ++Q L+A G S+
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQGSDTSQ 895
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|429769827|ref|ZP_19301919.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
gi|429186183|gb|EKY27137.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
Length = 896
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISS- 303
S + V V +DR L D+ TL+ V A + TA + L+ F I+ G P
Sbjct: 672 STARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGR 731
Query: 304 EPER-QRVIQCLEAAV---------------GRRA---------------SEGVRLELCM 332
EP R +++ +E AV RRA + V +E+
Sbjct: 732 EPRRLALLVKAMERAVLKGARTSAMQAPRVSARRAVFEVRPVVRIDADTGTSAVVIEVSG 791
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEAVRQKI 391
DR GLLAD+ RT +G + A V++ + A++ FY+TD G P +EA++ +
Sbjct: 792 ADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDPDGRKPKSKAKLEALKADL 851
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI---EDSQQIDRIE 181
DR GL +++ A L+ VV A++ T + +A ++ +G P E + ++
Sbjct: 682 DRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRRLALLVK 741
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
A R VLKG A+ + A + RR +E PV+R D V
Sbjct: 742 AMERAVLKG------ARTSAMQAPRVSARRAV--------FEVRPVVRIDADTGTSAV-- 785
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
V+ V DR LL D+ T++ Y A + + GERA FYI DG
Sbjct: 786 -------VIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDPDG--- 835
Query: 302 SSEPERQRVIQCLEA 316
+P+ + ++ L+A
Sbjct: 836 -RKPKSKAKLEALKA 849
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGS 169
N +G + + D GL S + V+A +++ A++ T NG++ ++ V + G
Sbjct: 712 NRESGYSEFTICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQV-NSPRGK 770
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
I D ++ VL G+ D+ A+ +R Q+M +R
Sbjct: 771 IIGDENCWKKVRDDTERVLLGEADV--------AAMVDKRQRPSQLM-----------VR 811
Query: 230 HSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ +P + N Y+V+++ D+ LL+ + TLT + + + I+T ++
Sbjct: 812 PAPRFPTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVA 871
Query: 289 LEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY+R I G I E + + V + L++A+
Sbjct: 872 DVFYVRDIFGHKIMDEAKLESVRERLKSAI 901
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ DN V T++ + + + G+L LT L L I + IS+ DVF+V D
Sbjct: 819 RIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRD 878
Query: 84 LNGNKLTDESVISYIEQSLET 104
+ G+K+ DE+ + + + L++
Sbjct: 879 IFGHKIMDEAKLESVRERLKS 899
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 321 RASEGVR-LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
+ SEG +++ D+ GLL +T T + GL + +++ST+ D+ ++FYV D G+
Sbjct: 825 QVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHKI 884
Query: 379 ADPKIIEAVRQKI 391
D +E+VR+++
Sbjct: 885 MDEAKLESVRERL 897
>gi|359399328|ref|ZP_09192332.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
gi|357599368|gb|EHJ61082.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
Length = 918
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A++++ G D F+VT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT S + +E+ L
Sbjct: 885 DLLGEKLTATSRLKALERRL 904
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G T + + +D GL + + ++++A++ T GR V+D G P
Sbjct: 724 HGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLVQDP-LGRPFM 782
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ Q++R+ + N L N I+ + V + R F R
Sbjct: 783 EESQLERLRTSIENALA--NRIK----ILPQLVAKPDARPRADAFEVR------------ 824
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P V N A ++VV V +DR LL + L + + +V+ A + T GERA FY
Sbjct: 825 --PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFY 882
Query: 293 IRHIDGTPISS 303
+ + G +++
Sbjct: 883 VTDLLGEKLTA 893
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 34/177 (19%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISS- 303
S + V V +DR L D+ TL+ V A + TA + L+ F I+ G P
Sbjct: 588 STARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGR 647
Query: 304 EPERQRV-IQCLEAAV---------------GRRASEGVR---------------LELCM 332
EP R + ++ +E AV RRA VR +E+
Sbjct: 648 EPRRLAILVKAMERAVLKGARTSTLEPPRVSARRAVFDVRPVVRIDADTGTSAVVIEVSG 707
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG-NPADPKIIEAVR 388
DR GLLAD+ RT +G + A V++ + A++ FY+TD G P +EA++
Sbjct: 708 ADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDADGRKPKSKARLEALK 764
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRASE 324
+I D P+ S+P+ ++ ++Q L+A G S+
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQGSDTSQ 895
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|399064503|ref|ZP_10747442.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
gi|398030747|gb|EJL24152.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
Length = 917
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V+S R +L L + L++ A+I++ G D F+VT
Sbjct: 824 PRVLFDNKASNRFTVVEVNSRDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT + +E+ L
Sbjct: 884 DLLGEKLTATPRLKALERRL 903
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + +D GL + + ++++A++ T GR ++D G P +
Sbjct: 724 GATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLIQDP-LGRPFME 782
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ Q++R+ + N L N I+ + + R F R
Sbjct: 783 ASQLERLSTSIENALA--NRIK----ILPQLNARPDARPRADAFEVR------------- 823
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V N A ++VV V +DR LL + L + + +V A I T GERA FY+
Sbjct: 824 -PRVLFDNKASNRFTVVEVNSRDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYV 882
Query: 294 RHIDGTPISSEPERQRVIQ--CLEAA 317
+ G +++ P R + ++ LEAA
Sbjct: 883 TDLLGEKLTATP-RLKALERRLLEAA 907
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLEADGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 761 NNPERIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
++ D P+S
Sbjct: 859 FVTDADNQPLS 869
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 48/216 (22%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+V ++ R + + + + D+ V + + + A I T+ + L+
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 292 YI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGVR------------ 327
YI DG+PI + PER + + L AA + RR ++
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
LE+ DR GLLA V + F + L+V A+++T + ++F+VTD P
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 379 ADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
+DP++ ++Q I +KEL + E+E+Q
Sbjct: 869 SDPQLCLRLQQAI------IKEL------QQENEQQ 892
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + ++Q++
Sbjct: 862 DADNQPLSDPQLCLRLQQAI 881
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+ N + DR G+ S + VLA + +VV A ++T V D
Sbjct: 686 KENEMESCVDITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGT-----VVDIFKA 740
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM---FADRDYERM 225
+P D + + V K D+ +++ E RL + D +Y+
Sbjct: 741 TPHADRHHALEV---WKKVQKDAEDVFRGNLSL-------EDRLKEKAKPSILDSEYK-- 788
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ P + V N A ++++ V +R LL+D+ TL ++ + A I T +
Sbjct: 789 -----PSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKAD 843
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
+ FY+R ++G + E E R+++ L +G
Sbjct: 844 QVADVFYVRDLEGQKVEDEKETARIVETLNKKLG 877
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 318 VGRRASEGVRL-ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
V RAS+ L E+ ++R GLL D+TRT E GL++ A+++T+ D+ ++FYV D G
Sbjct: 797 VNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDLEG 856
Query: 377 NPAD-----PKIIEAVRQKIG 392
+ +I+E + +K+G
Sbjct: 857 QKVEDEKETARIVETLNKKLG 877
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MKDMEWPACLD-EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDL 59
+K+ P+ LD EY+ + P+++++N TL++V + R G+L + + L +L
Sbjct: 774 LKEKAKPSILDSEYKP----SHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFEL 829
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
L I+ A I++ DVF+V DL G K+ DE + I ++L
Sbjct: 830 GLDIRIAKIATKADQVADVFYVRDLEGQKVEDEKETARIVETL 872
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R++ F T +E+ +RVGLL ++ L +L + AK+ T ++A + YV+D G
Sbjct: 800 RASDF--FTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDL-EG 856
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ED ++ RI L L G
Sbjct: 857 QKVEDEKETARIVETLNKKLGG 878
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 761 DNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L DL +VV+A V+ + + + ++G +ED +
Sbjct: 100 TVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPEL 159
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 160 LEAIRLTIINNLIQYHPESSSQLAMGAA-----------------FGLLPP-KEQVDVDI 201
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
T N +D S+ V+ DR LL D+V ++TD++ V +T G A +F++
Sbjct: 202 ATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS 261
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ G I S+P +Q + L + R A+E
Sbjct: 262 Y-KGKAI-SKPLQQVLANSLRYFLRRPATE 289
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 761 DNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 51/266 (19%)
Query: 169 SPIEDSQQIDRIEARLRNVL-KGDNDIRSAKMTVSMA-----VTHTERRLHQMMFADRDY 222
+P++ +QI R ++ ++L +G ND + S + HT D +
Sbjct: 624 NPVDREEQIRRTQSAALDILVRGGNDPDDVEQLWSQLGDDYFLRHTA--------GDVAW 675
Query: 223 ERMPVLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
+L+ TD P+V ++ R + + + + D+ V + + + A
Sbjct: 676 HSDAILQQPTDGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDA 735
Query: 279 TINTAGERAYLEFYI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGV 326
+ T+ + L+ YI +G I PER +++ + L A + RR +
Sbjct: 736 RVITSSSQFTLDTYIVLDTEGESIGDNPERVKKIRKGLTDALRNPDDYPTIIQRRVPRQL 795
Query: 327 R--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
+ LEL DR GLLA + F E L++ A+++T +
Sbjct: 796 KHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVE 855
Query: 367 NIFYVTDEMGNP-ADPKIIEAVRQKI 391
++F++TD P +DP++ +++ I
Sbjct: 856 DVFFITDADNQPLSDPELCRRLQEAI 881
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 761 DNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 44/190 (23%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL-EFYI 293
P+V + N +D +VV V + L D V L ++ + + +G+ +FY+
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 294 -------------------RHIDGTPISSEPERQRVIQCLEAAVGRRASEGV-------- 326
+ I ++ PE IQ A R EGV
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQA--KAPTRAGGEGVLGKVKKKV 129
Query: 327 -------------RLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+LE+ DR GLL DV RT ++ L V AEV T D+A +I YVT
Sbjct: 130 QTGIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYVTH 189
Query: 374 EMGNPADPKI 383
+ G P P +
Sbjct: 190 K-GGPLSPPM 198
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VT+ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I+ I L L+ +D +T +RR+ + L+H
Sbjct: 761 NNPERIEEIRNGLITALRNPDDY----------LTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCL 314
++ D P+S R+ Q L
Sbjct: 859 FVTDADNQPLSDPQFCLRLQQAL 881
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 49/225 (21%)
Query: 227 VLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
++ H D P+V ++ R + + + + D+ V + + + A I T
Sbjct: 680 IIEHPQDGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLEAA------VGRRASEGVR--- 327
+ + L+ YI DG+PI + PER +I L + RR ++
Sbjct: 740 SSSQFTLDTYIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA V + F + L+V A+++T + ++F+
Sbjct: 800 FPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
VTD P +DP+ ++Q + VKEL + E+E+Q
Sbjct: 860 VTDADNQPLSDPQFCLRLQQAL------VKEL------QQENEQQ 892
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L DL +VV+A V+ + + + ++G +ED +
Sbjct: 100 TVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPEL 159
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 160 LEAIRLTIINNLIQYHPESSSQLAMGAA-----------------FGLLPP-KEQVDVDI 201
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
T N +D S+ V+ DR LL D+V ++TD++ V +T G A +F++
Sbjct: 202 ATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS 261
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ G I S+P +Q + L + R A+E
Sbjct: 262 Y-KGKAI-SKPLQQVLANSLRYFLRRPATE 289
>gi|303288045|ref|XP_003063311.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455143|gb|EEH52447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 358
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI------------- 296
V V C D+T L D+ TL D V T G+ A++ ++ +
Sbjct: 1 VRVTCPDKTGLAADIARTLFDFGLVTVKGDFATDGKWAFVLVTVKKLTLSSMNLAAQDDP 60
Query: 297 -----DGTPISSEPERQRVIQCLEAAVGRRASEGVR---------LELCMEDRQGLLADV 342
G P S P +G +S GV L + +EDR GLL DV
Sbjct: 61 GGGSSPGFPSSRSPSSH--------GLGDPSSAGVIEPKPGTLYILTVEVEDRVGLLHDV 112
Query: 343 TRTFRENGLNVTRAEVSTE-RDEALNIFYVTDE 374
T+ L V RA +ST D A+++FY+TDE
Sbjct: 113 TQELWACELTVHRAHISTSPADLAVDMFYITDE 145
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
V+V + G+ + + L D L+ K ++DG++ + V L + + +
Sbjct: 1 VRVTCPDKTGLAADIARTLFDFGLVTVKGDFATDGKWAFVLVTVKKLTLSSMNLAAQDDP 60
Query: 98 IEQSLETIHYGRSNSFNGLTALELTGT----------------DRVGLLSEVFAVLADLQ 141
S RS S +GL G DRVGLL +V L +
Sbjct: 61 GGGSSPGFPSSRSPSSHGLGDPSSAGVIEPKPGTLYILTVEVEDRVGLLHDVTQELWACE 120
Query: 142 CSVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMT 200
+V A + T +A + Y+ D + P E Q++ I A +R VL+G + M
Sbjct: 121 LTVHRAHISTSPADLAVDMFYITDERNELPNE--QRVAEISANVRAVLRG----KRRSMD 174
Query: 201 VSMAVTHTERRLHQMMFADRDYERMPVLRHST--------------DYPVVTVQNWADRS 246
S A + F + +L HS VTV N ++
Sbjct: 175 ASAAALGNVQISPAPHFVSKTRGGNRLLDHSGTALEKVETASAAHYSEATVTVDNLMSKA 234
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
++V ++ +DR LL+DV+ D++ + +A +
Sbjct: 235 HTVFQMRTRDRKGLLYDVLRASKDLKVHISYAKV 268
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V++++ R +L L + L++ A+I++ G D F+VT
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+T I IE+ L
Sbjct: 884 DLLGEKITAAPRIKAIERRL 903
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 22/192 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + +D GL + + ++++A++ T GR V+D G P +
Sbjct: 724 GATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLVQDP-LGRPFME 782
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+E + N L N I+ + V + R F R
Sbjct: 783 YGQLRRLELTIENALA--NRIK----ILPQLVAKPDARPRADAFDVR------------- 823
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V N A ++VV + +DR LL + L + + +V A I T GERA FY+
Sbjct: 824 -PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYV 882
Query: 294 RHIDGTPISSEP 305
+ G I++ P
Sbjct: 883 TDLLGEKITAAP 894
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
D+ Q R+R + G + A T +RR+ + L+H
Sbjct: 761 DNPQ------RVRQIRDG---LSEALRNPENYPTIIQRRVPRQ------------LKHFD 799
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
P VT+ N A R +++ + DR LL + + + + +A I T GER F+
Sbjct: 800 FPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 293 IRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
I D P+ S+P+ ++ ++Q L+A G S
Sbjct: 860 ITDADNQPL-SDPQLCSRLQEAIVQQLQAGQGSDTS 894
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 218 ADRDYERMPVLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEY 273
AD + +L+ D P+V ++ R + + + + D+ V ++ +
Sbjct: 671 ADVAWHSDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNL 730
Query: 274 VVFHATINTAGERAYLEFYI-RHIDGTPISSEPERQRVI-----------QCLEAAVGRR 321
+ A I T+ + L+ YI DG I P+R R I + + RR
Sbjct: 731 NIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRR 790
Query: 322 ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
++ LE+ DR GLLA + R F E L++ A+++T
Sbjct: 791 VPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATL 850
Query: 362 RDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+ ++F++TD P +DP++ +++ I
Sbjct: 851 GERVEDVFFITDADNQPLSDPQLCSRLQEAI 881
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T+V + + R G+L ++ LL++ A I++ G DVF VTD
Sbjct: 807 QVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTD 866
Query: 84 LNGNKLTDESVISYIEQSL 102
LNG+ ++D + +++ +L
Sbjct: 867 LNGDPVSDPELCQHLQDTL 885
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 26/184 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI-EDSQQIDRIEAR 183
D L + L L ++++A++ T + Y+ G+PI +D +I+ I
Sbjct: 717 DTQNLFAATVNALDSLGLTIMDARIITSADGFSLDTYIVLDEHGTPIGDDWPRIEHIRQT 776
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNW 242
L LK H E+ F RMP D P V + N
Sbjct: 777 LTETLK-----------------HPEK------FGTTVSRRMPRRHKHFDVPTQVVISND 813
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
+VV++ DR LL + E +V +A I T GER F++ ++G P+
Sbjct: 814 IVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTDLNGDPV- 872
Query: 303 SEPE 306
S+PE
Sbjct: 873 SDPE 876
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLLA + R F + L V A ++T + ++F+VTD G+P +DP++ + ++ +
Sbjct: 827 DRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTDLNGDPVSDPELCQHLQDTL 885
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ G+PI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGTPIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+++ R+ + +G D +R+ +++ H R+L F
Sbjct: 761 DNRE------RIEEIRQGLIDAVRNPDEYLTIIQRHVPRQLKHFAFP------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V + V +A I T GER F
Sbjct: 802 ---PQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
++ + D P+S
Sbjct: 859 FVTNADNQPLS 869
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ ++Q L+A G S
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQGSDTS 894
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T Y V D + GS
Sbjct: 701 FEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDTYIVLDADGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ Q+I I L + LK +D + +RR+ + L+H
Sbjct: 761 DNPQRIAEIRQGLVDALKNPDDYPNI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+VT+ A R SV+ V DR LL + D + V +A I T GER F
Sbjct: 799 AFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
Y+ P+ S+P+ + + L+AA+ + S+
Sbjct: 859 YVTDAHNQPL-SDPD---LCKRLQAALVEQLSQA 888
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 218 ADRDYERMPVLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEY 273
AD + +L+H D P+V ++ R + + + + D+ V + +
Sbjct: 671 ADVAWHTEAILQHPDDGTPLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNL 730
Query: 274 VVFHATINTAGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLEAA------VGRR 321
+ A I T+ L+ YI DG I P+R Q ++ L+ + RR
Sbjct: 731 NIQDARIITSTSLFTLDTYIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRR 790
Query: 322 ASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTE 361
++ LE+ DR GLLA + F + L+V A+++T
Sbjct: 791 VPRQLKHFAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATL 850
Query: 362 RDEALNIFYVTDEMGNP-ADPKI 383
+ ++FYVTD P +DP +
Sbjct: 851 GERVEDVFYVTDAHNQPLSDPDL 873
>gi|126666182|ref|ZP_01737162.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
gi|126629504|gb|EBA00122.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
Length = 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 222 YERMPVLRHSTDY-PVVTVQN---WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
++ ++RH D P+V +++ YS + + K+RT L + + H
Sbjct: 667 WQTAAIIRHGDDADPLVLIRDTRGGPTDGYSQIIIYMKNRTASFAATTAVLEQLNLNIVH 726
Query: 278 ATINTAGERAYLEFYIRHID-GTPISSEPERQ-----RVIQCLEAA------VGRRASEG 325
A I+++ + Y+ D G P+ +P+R+ R+I+ L+ + RR
Sbjct: 727 ARISSSDGPWSINSYVVLDDHGQPLGIDPDRKERVRSRLIEELDDPEDYPDIIHRRTPRQ 786
Query: 326 VR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEA 365
++ LE+ DR GLLA + + E+ + +T A+++T +
Sbjct: 787 LKHFAFPTEVLLSNDRFNLRTVLEVITPDRPGLLARIGQVLLEHRVRLTTAKIATLGERV 846
Query: 366 LNIFYVTDEMGNP-ADPKIIEAVRQKI 391
++F+VTDE GN DP +A++ +
Sbjct: 847 EDVFFVTDENGNALCDPAACQALQDDL 873
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V++ N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVLLSNDRFNLRTVLEVITPDRPGLLARIGQVLLEHRVRLTTA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD NGN L D + ++ L
Sbjct: 838 KIATLGERVEDVFFVTDENGNALCDPAACQALQDDL 873
>gi|84498339|ref|ZP_00997136.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
gi|84381839|gb|EAP97722.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
Length = 789
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 41/175 (23%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQR 309
+++ +DR L D L VV A + T A E+++ +P +EPE+ R
Sbjct: 607 IDIADRDRLGLFADTAGLLAAEGLVVRTAVLRTVDGIAVNEWHVE----SPSDTEPEKAR 662
Query: 310 VIQCL-EAAVGRRA------------------------------------SEGVRLELCM 332
+++ L A G RA ++ +E+
Sbjct: 663 LVRGLMRLATGDRAPLSLLDRRRQFATRPSGSSTIGTPGQPRALVVPGASTDATVIEVRA 722
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
DR GLL ++ F + G++V A ++T + L+ FYV+D G P DP + V
Sbjct: 723 HDRPGLLHELGMCFAKAGVSVRSAHIATYAGQTLDTFYVSDFSGRPLDPGKVAQV 777
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 76/202 (37%), Gaps = 33/202 (16%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
+ DR GL S VLA Q V A+V +G +L++ G P D +
Sbjct: 602 IGAADRPGLFSLCAGVLALNQLDVRAARVSVQDGH-GTLVFAVRPRFGRPPVPEILADGV 660
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
A L L +R ER Q DR R P +
Sbjct: 661 RAALEGTLPLGERLR-----------QRERDYSQ----DRSPGRPPRI------------ 693
Query: 241 NWADR----SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
+W D + +V V+ DR LL + L D V AT+ T G A FY+
Sbjct: 694 SWFDAEATGTTGLVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDP 753
Query: 297 DGTPISSEPERQRVIQCLEAAV 318
GTPI + +R+R + L AAV
Sbjct: 754 SGTPIDPD-QRERAERALVAAV 774
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+E+ DR GLL +T + GL+V+ A V T +A++ FYV+D G P DP
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDP 760
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 114 NGLTAL-ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
G T L E+ TDR GLL + A LAD V A V T YV D SG+PI
Sbjct: 701 TGTTGLVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSD-PSGTPI- 758
Query: 173 DSQQIDRIEARLRNVLKGD 191
D Q +R E L ++GD
Sbjct: 759 DPDQRERAERALVAAVRGD 777
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
AT + + + +H V + LNL I A I+S +F +D + V D +G + +
Sbjct: 704 ATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I Q L + H+ ++++ +T LE+ D
Sbjct: 764 ARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + D S+ AK+ T R+ + +V D ++ P+ D + R++ +
Sbjct: 824 RPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHN-QPLSDPELCARLQLAIA 882
Query: 186 NVLK-GDNDIRSAKMTV 201
L GD+ I+ +++++
Sbjct: 883 EQLADGDSYIQPSRISI 899
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L S+ +A+V T + Y V D + GS
Sbjct: 701 FEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ +I I L L+ D T +RR+ + L+H
Sbjct: 761 NNPARIQEIRQGLVEALRNPADY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+QN A R +++ + DR LL + D + + +A I T GER F
Sbjct: 799 AFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCLEAAVGRRASEG 325
++ P+ S+PE + L+ A+ + ++G
Sbjct: 859 FVTDAHNQPL-SDPE---LCARLQLAIAEQLADG 888
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ D +L ++ A I++ G DVF V
Sbjct: 801 APQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + + ++ ++
Sbjct: 861 TDAHNQPLSDPELCARLQLAI 881
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 37/194 (19%)
Query: 227 VLRH-STDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H S+ P+V ++ R + + + + D+ V + + + A + T
Sbjct: 680 ILQHPSSGGPLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-QRVIQCLEAA----------VGRRASEGVR--- 327
+ + L+ YI DG I + P R Q + Q L A + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LE+ DR GLLA + + F + L++ A+++T + ++F+
Sbjct: 800 FAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKI 383
VTD P +DP++
Sbjct: 860 VTDAHNQPLSDPEL 873
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T L + D LL+ + A + ++V+A+++T D +
Sbjct: 717 TDPVRGVTELTVYSPDHPRLLAIITGACATMGGNIVDAQIFT----------TTDGFALD 766
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDI-RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
I S+ +R E LR + I R+ K + +A + AD+ ++ P
Sbjct: 767 SIFISRAFERDEDELRRAGRIATAIERALKGEIKIA----------ELVADKHPKQPP-- 814
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ P V++ N +VV + DR LL+++ L + + A + T GERA
Sbjct: 815 KTFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAV 874
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + GT + +P+R +I+
Sbjct: 875 DVFYVTDLTGTRV-VQPDRLAMIRA 898
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T LN+T A V+T + A+++FYVTD G
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGT 885
>gi|225435020|ref|XP_002284171.1| PREDICTED: uncharacterized protein LOC100262189 [Vitis vinifera]
gi|297746113|emb|CBI16169.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-IRHIDGTPISSEPER 307
V+ V C D+T L D+ T+ + + I+T G Y+ + I H I +
Sbjct: 22 VITVNCPDKTGLGCDICRTILNFGLYITKGDISTDGIWCYIVLWVIPHSSSHIIRWSNLK 81
Query: 308 QRVIQ---------CLEAAVGRRASEGVRL--ELCMEDRQGLLADVTRTFRENGLNVTRA 356
R+I C A V L C+ DR+GLL DVT+ E L + R
Sbjct: 82 DRLISICPPCSVSYCFNQQSDCTAPSPVYLLKFFCL-DRKGLLHDVTQVLSELELTIQRV 140
Query: 357 EVSTERD-EALNIFYVTDEM 375
+V+T D L++F++TD M
Sbjct: 141 KVTTTPDGRVLDLFFITDNM 160
>gi|117924711|ref|YP_865328.1| UTP-GlnB uridylyltransferase, GlnD [Magnetococcus marinus MC-1]
gi|117608467|gb|ABK43922.1| UTP-GlnB uridylyltransferase, GlnD [Magnetococcus marinus MC-1]
Length = 924
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+N + T + + D GL+S + LA S++ A T +A I+V
Sbjct: 731 RTNPASHTTDMLIYCQDHPGLISRISGALAMESISILSANGNTTKDGMALDIFVIQDWQA 790
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
P+ D ++ ++ L +L G +LH D P +
Sbjct: 791 QPVADLEKQQMVKQTLAKILSG--------------------KLH----PDTHKAHKPKI 826
Query: 229 RHSTDYPVVTVQNW---ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
R + V T NW A Y+++ + ++R LL V TLT+ + I T GE
Sbjct: 827 RKEDHFMVPTAVNWDHHASEIYTIMEITTRNRFGLLHAVTRTLTEEGAQISTCKIATYGE 886
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
+A FY++ + G ++ QR+ + L AA+
Sbjct: 887 KAIDVFYLKDLFGLKLNHN-RCQRIERALHAAL 918
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+E+ +R GLL VTRT E G ++ +++T ++A+++FY+ D G
Sbjct: 851 MEITTRNRFGLLHAVTRTLTEEGAQISTCKIATYGEKAIDVFYLKDLFG 899
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+VVIDN ++++V ++ G L Q + D L I KAYI+++ +DVF+V
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D G KL DE + Q +
Sbjct: 742 LDSRGQKLVDEDFRQEVTQGI 762
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+++ V+A +VV+A+++T D +D I+ R
Sbjct: 591 DRPGLLAKICGVMALNNLTVVKAQIFT-------------------WADGTVVDVIDVRA 631
Query: 185 RNVLK-GDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP------VLRHSTDYPVV 237
+ L + RS + +A+ H+M + R Y ++ R V
Sbjct: 632 TDGLGFAEKGWRSLNEQLDLAIE------HRMGLSHRLYRKLSSGYGRRSQRAGEVASKV 685
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
+ N + +YSV+ V D L+ + ++ D + A I T E+ FY+
Sbjct: 686 VIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLDSR 745
Query: 298 GTPISSEPERQRVIQCLEAAVGR 320
G + E RQ V Q + ++ R
Sbjct: 746 GQKLVDEDFRQEVTQGILHSIDR 768
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+E+ D G L +T++ + GLN+ +A ++TE ++ +++FYV D G D +
Sbjct: 698 IEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYVLDSRGQKLVDEDFRQE 757
Query: 387 VRQKI 391
V Q I
Sbjct: 758 VTQGI 762
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T L + D LL+ + A + ++V+A+++T D +
Sbjct: 717 TDPVRGVTELTVYSPDHPRLLAIITGACATMGGNIVDAQIFT----------TTDGFALD 766
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDI-RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
I S+ +R E LR + I R+ K + +A + AD+ ++ P
Sbjct: 767 SIFISRAFERDEDELRRAGRIATAIERALKGEIKIA----------ELVADKHPKQPP-- 814
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ P V++ N +VV + DR LL+++ L + + A + T GERA
Sbjct: 815 KTFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAV 874
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + GT + +P+R +I+
Sbjct: 875 DVFYVTDLTGTRV-VQPDRLAMIRA 898
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T LN+T A V+T + A+++FYVTD G
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGT 885
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T L + D LL+ + A + ++V+A+++T D +
Sbjct: 717 TDPVRGVTELTVYSPDHPRLLAIITGACATMGGNIVDAQIFT----------TTDGFALD 766
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDI-RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
I S+ +R E LR + I R+ K + +A + AD+ ++ P
Sbjct: 767 SIFISRAFERDEDELRRAGRIATAIERALKGEIKIA----------ELVADKHPKQPP-- 814
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ P V++ N +VV + DR LL+++ L + + A + T GERA
Sbjct: 815 KTFLVPPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAV 874
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + GT + +P+R +I+
Sbjct: 875 DVFYVTDLTGTRV-VQPDRLAMIRA 898
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+E+ DR GLL ++T LN+T A V+T + A+++FYVTD G
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGT 885
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 23/214 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + ++ ++++A++ T +A ++ G P +++
Sbjct: 722 GATLVTIYAADHPGLFYRIAGAISVAGGNIIDARIHTTRDGMALDNFLVQDPYGRPFDEA 781
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q++R++ + + L + M + E FA
Sbjct: 782 PQLERLKQSIEDALANRGKMIDRLMAKPLPRPRAE------AFAI--------------V 821
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LL + +L + A + T GERA FY+
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLT 881
Query: 295 HIDGTPISSEPERQRVIQ--CLEAAVGRRASEGV 326
+ G I + R + I+ L AA G R ++
Sbjct: 882 DLTGDKIGAA-SRLKTIERRLLAAAAGERMADAA 914
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L + L + I A++++ G +D F++T
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLT 881
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+ S + IE+ L
Sbjct: 882 DLTGDKIGAASRLKTIERRL 901
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 736 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDEDEG 795
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + V A R L
Sbjct: 796 ------RRATRIGDMIEEVLEG-------KLRLPDVV------------ARRATNGKGKL 830
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ T P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 831 KPFTVEPEVAINNSWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 889
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 890 RDVFYVTDLLGAQITA-PTRQAAIK 913
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N+ T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 797 ------RRATRIGETIEEVLEGK--LRLPEAVARRATSGSKAKLRAFVVE---------- 838
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 839 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 892 RDVFYVTDLLGAQITA-PTRQAAIK 915
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F ++G+ + A+++T + +IF++TD GNP +DP E
Sbjct: 821 LEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFITDHDGNPLSDPAQCEQ 880
Query: 387 VRQKI 391
++ I
Sbjct: 881 LQDNI 885
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 30/161 (18%)
Query: 56 LTDLNLLIKKA--YISSDGRFFMDVFHVTDLNGNK------------LTDESVI--SYIE 99
L+ L L I+ A Y S DG + +D F V D NG L DE + SY E
Sbjct: 731 LSGLQLDIQDARIYSSPDG-YTIDTFFVLDENGEPTSPDRFDLIRRALLDELALVNSYPE 789
Query: 100 ------------QSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
S+ + ++ G + LE+ DR GLL+ + V + A
Sbjct: 790 IISRRTPRMLKHFSMPSRTRLSNDLIAGTSVLEVISPDRPGLLAAIGRVFLQHGIQLQNA 849
Query: 148 KVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
K+ T R+ + ++ D + G+P+ D Q ++++ +R L
Sbjct: 850 KIATLGERVEDIFFITD-HDGNPLSDPAQCEQLQDNIRKAL 889
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 33/175 (18%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER- 307
+ V K + L + L ++ + A I +G L+ FY+ DG I P R
Sbjct: 702 IFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGDNPSRI 761
Query: 308 QRVIQCLE----------AAVGRRASEGVRL--------------------ELCMEDRQG 337
+I+ ++ A + RR +RL E+ DR G
Sbjct: 762 AHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVITPDRPG 821
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKI 391
LLA + R F + + + A+++T + ++F++TDE P DPK+ E ++Q I
Sbjct: 822 LLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQRPIDDPKLCEEIQQAI 876
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I N + +++ V R G+L E L+DL+L I A+I++ G +D F+V+
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + + I L
Sbjct: 894 DLTGQKIDNPARLKTIRDRL 913
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + ++++G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAK 198
I++ ++ I RL L+G+ R K
Sbjct: 898 QKIDNPARLKTIRDRLIATLQGEAGQRGVK 927
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V ++N +SV++V DR LL ++ L+D+ + A I T GE+ FY+
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 295 HIDGTPISSEPE----RQRVIQCLEAAVGRRA 322
+ G I + R R+I L+ G+R
Sbjct: 894 DLTGQKIDNPARLKTIRDRLIATLQGEAGQRG 925
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V DN T+++V + R +L + L + + +I+ A+I+ G D F+VT
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+TD S + I +L
Sbjct: 884 DLTGDKITDPSRLETIRAAL 903
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D G+ + + + ++++A++ T A ++ G +
Sbjct: 724 GATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFGED 783
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q++RIE + + L+ R A++ +A RR F R
Sbjct: 784 NQLERIERSIADALE-----RGAQLVPKLAQRPLPRR-GAGAFDVR-------------- 823
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V N A ++V+ V +DR LL + L + ++ A I GERA FY+
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLEL 330
+ G I ++P R ++ + AA+ AS+ ++ EL
Sbjct: 884 DLTGDKI-TDPSR---LETIRAALVDAASDEMQAEL 915
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 698 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 757
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 758 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 795
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 796 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 855
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ ++Q L+A AS
Sbjct: 856 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQASDAS 891
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 387 VRQKI 391
+++ I
Sbjct: 874 LQEAI 878
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 799 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 858
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 859 DADNQPLSDPQLCSRLQEAI 878
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 227 VLRHSTDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+ H + P+V ++ R Y + + + DR L D+ TL + + A I T+
Sbjct: 683 IANHGINIPLVLIKETNVREYAGGTQLFIYAPDRAHLFADIAATLDALNLDIQDARIMTS 742
Query: 284 GERAYL--EFYIRHIDGTPISSEPERQRVIQ---CLE-------AAVGRRASEGVR---- 327
+ F + DGT I P+R IQ LE RR S ++
Sbjct: 743 SASHFSLDTFIVLEQDGTSIGDNPDRLFEIQHKLLLEIQNPNDTQPPKRRISRQLKHFQI 802
Query: 328 ----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
+E+ DR GLLAD+ R FR L + A +ST + ++F++
Sbjct: 803 PAEITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFL 862
Query: 372 TDEMGNP 378
D G P
Sbjct: 863 VDRQGLP 869
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL-IYVKDCNSGSPI 171
+ G T L + DR L +++ A L L + +A++ T + SL ++ G+ I
Sbjct: 703 YAGGTQLFIYAPDRAHLFADIAATLDALNLDIQDARIMTSSASHFSLDTFIVLEQDGTSI 762
Query: 172 EDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ I+ +L ++ ND + K +S + H + +P
Sbjct: 763 GDNPDRLFEIQHKLLLEIQNPNDTQPPKRRISRQLKHFQ---------------IPA--- 804
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
+TV N +VV V DR LL D+ +E + +A I+T GE
Sbjct: 805 -----EITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDV 859
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAV 318
F++ G P+ + + +R+ L++ +
Sbjct: 860 FFLVDRQGLPLMNSSDVERLQNELKSTI 887
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ ++Q L+A AS
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D
Sbjct: 737 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTT-------------------DG 777
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+ +D I A R + D++ R A M E +L R L+ T
Sbjct: 778 RALDTI-AITREYDRDDDEGRRATRIGEMIEDILEGKLRLPEVVARRASGKGKLKPFTVE 836
Query: 235 PVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N W++R Y+V+ V DR LL+ + +++ + + A + T GERA FY+
Sbjct: 837 PEVAINNQWSER-YTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYV 895
Query: 294 RHIDGTPISSEPERQRVIQ 312
+ G I++ P RQ I+
Sbjct: 896 TDLLGAQITA-PTRQAAIK 913
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H P+V V A R + + + DR L V L V A I T+ +
Sbjct: 681 LLVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQR-VIQCLEAAVG---------RRASEGVR-------- 327
++ F + DG+P+S P+R +IQ LE A+ RR S +R
Sbjct: 741 MAMDTFIVLEPDGSPLS--PDRHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEV 798
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + G+++ A +ST + ++F + +
Sbjct: 799 NFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSE 858
Query: 376 GNPADPKIIEAVRQKI 391
D ++ +A+RQ++
Sbjct: 859 RQALDEEMRKALRQRL 874
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 130/298 (43%), Gaps = 31/298 (10%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK------ 88
++ V+ + G+ + +++ L I + +S+DG++ VF V + +
Sbjct: 20 PAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGLLKK 79
Query: 89 --------LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ S ISY L+ + F L+L DR GLL +V VL +L
Sbjct: 80 RLVGACPSCSSASGISYYTAELQPPR--PPDVF----LLKLACHDRKGLLHDVTGVLCEL 133
Query: 141 QCSVVEAKV-WTHNGRIASLIYVKD---CNSGSPIEDSQQIDRIEARLRN-VLKGDNDIR 195
+ ++ + KV T +GR+ L +V D C ED+ D + A + N ++ D ++
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTSSCIXNKRKEDTY--DHLRAVMGNSMISCDIEMV 191
Query: 196 SAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQC 254
++T A + + + + + + +P ST V+ + N ++++V + C
Sbjct: 192 GPEITACSAESSFLPTAITENILPLQMPDELPSSLTSTSVSVI-MDNLLSPAHTLVQIVC 250
Query: 255 KDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY-LEFYIRHIDGTPISSEPERQRVI 311
+D LL+D++ TL D + + R ++ +I DG I +P +Q+ +
Sbjct: 251 QDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLFIMQADGKKI-VDPNKQKAL 307
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H P+V V A R + + + DR L V L V A I T+ +
Sbjct: 681 LLVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQR-VIQCLEAAVG---------RRASEGVR-------- 327
++ F + DG+P+S P+R +IQ LE A+ RR S +R
Sbjct: 741 MAMDTFIVLEPDGSPLS--PDRHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEV 798
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + G+++ A +ST + ++F + +
Sbjct: 799 NFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSE 858
Query: 376 GNPADPKIIEAVRQKI 391
D ++ +A+RQ++
Sbjct: 859 RQALDEEMRKALRQRL 874
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKL-TDE 92
AT + V S + + + A L+ LNL I+ A I SS + +D F V + NG L ++
Sbjct: 740 ATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDTFFVLNENGEPLGNNQ 799
Query: 93 SVISYIEQSL-------------------ETIHYGRSNSFNGLTA--------LELTGTD 125
+++ I+Q L + Y S + L+ LE+ D
Sbjct: 800 TLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLSTDTIRNCSVLEVISPD 859
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + D ++ AK+ T R+ + ++ D N G P+ D ++++ +R
Sbjct: 860 RPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIAD-NDGKPLGDVALCEKLQQEIR 918
Query: 186 NVL 188
L
Sbjct: 919 EQL 921
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F + + + A+++T + +IF++ D G P D + E
Sbjct: 853 LEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADNDGKPLGDVALCEK 912
Query: 387 VRQKI 391
++Q+I
Sbjct: 913 LQQEI 917
>gi|21536685|gb|AAM61017.1| unknown [Arabidopsis thaliana]
Length = 410
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + + ++ + + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTD--TRELLGTVKRRNEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT--HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
+T T + + +F+ H++ + V N +++++++ C+D L
Sbjct: 197 PEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGL 256
Query: 261 LFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIRHIDGTPISSEPERQRVIQCLEA 316
L+D++ T D + + G+ ++ +I DG I + +I L A
Sbjct: 257 LYDIMRTFKDFNIQISYGRFTIKRGKNCEIDLFIVQSDGRKILDSSKLNALITRLRA 313
>gi|18404252|ref|NP_030235.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|4883601|gb|AAD31570.1| expressed protein [Arabidopsis thaliana]
gi|20260622|gb|AAM13209.1| unknown protein [Arabidopsis thaliana]
gi|23197994|gb|AAN15524.1| unknown protein [Arabidopsis thaliana]
gi|330254211|gb|AEC09305.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949476|gb|AEP31951.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 410
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + + ++ + + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTD--TRELLGTVKRRNEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT--HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
+T T + + +F+ H++ + V N +++++++ C+D L
Sbjct: 197 PEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGL 256
Query: 261 LFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIRHIDGTPISSEPERQRVIQCLEA 316
L+D++ T D + + G+ ++ +I DG I + +I L A
Sbjct: 257 LYDIMRTFKDFNIQISYGRFTIKLGKNCEIDLFIVQSDGRKILDSSKLNALITRLRA 313
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 761 DNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 NFPPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE-----RQRVIQCLEAAVGRRAS 323
+I D P+ S+P+ ++ ++Q L+A +S
Sbjct: 859 FITDADNQPL-SDPQLCSRLQEAIVQQLQAGQASESS 894
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|336176218|ref|YP_004581593.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
gi|334857198|gb|AEH07672.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
Length = 765
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 33/199 (16%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+ VLA + V A NGR V + G P ++ L
Sbjct: 596 DRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVASTHDGGP-----SAGKLRGDL 650
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLH----QMMFADRDYERMPVLRHSTDYPVVTVQ 240
VL G D+ + A RRL +++F D
Sbjct: 651 LRVLAGRVDLDARIAGREQAYAAARRRLPPAPPKIIFDDSG------------------- 691
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
S +VV ++ DR +LF +V LTD V A + T G FY+R DG+
Sbjct: 692 -----SDTVVEIRTPDRAGVLFRMVRALTDAGLGVRTAIVATIGLDVVNAFYVREADGST 746
Query: 301 ISSEPERQRVIQCLEAAVG 319
+ R+ V + AA+G
Sbjct: 747 VGRPGRREEVANRVLAALG 765
>gi|395491855|ref|ZP_10423434.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26617]
Length = 914
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 722 GATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFDED 781
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q+ R++ + + L N ++ ++ + T E P+
Sbjct: 782 GQLVRLKKAIEDALA--NRVKLVDRLLAKPLPRTR------------AEAFPIA------ 821
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LL + L + + A + T GERA FY+
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 881
Query: 295 HIDGTPISSEPERQRVIQ--CLEAAVGRRASEGV 326
+ G I + R R I+ L AA G R E
Sbjct: 882 DLTGEKIGAG-SRLRTIERRLLSAAAGERLVEAA 914
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+++V++ R +L + L + I A++++ G +D F++
Sbjct: 821 APNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ S + IE+ L + G
Sbjct: 881 TDLTGEKIGAGSRLRTIERRLLSAAAG 907
>gi|149374439|ref|ZP_01892213.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
gi|149361142|gb|EDM49592.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
Length = 881
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 124/299 (41%), Gaps = 45/299 (15%)
Query: 136 VLADLQCSVVEAKVW-THNGRIASLIYVKDC-----NSGSPIEDSQQIDRIEARLRNVLK 189
VL S K+W T + +Y++ S +P++ + + ++ R +L
Sbjct: 577 VLTVCDISATNPKLWNTWRASLLRQLYIETKRALRRGSETPVDRQEWVRATQSEAREILH 636
Query: 190 GDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-PVVTVQN---WADR 245
N + + ++ T E Q D ++ ++RH D P+V +++
Sbjct: 637 AQN--MTDEQIDNIWETLDEDYFLQDSTVDIAWQTAAIIRHGDDPDPLVLIRDTRGGPTD 694
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIRHIDGTPISSE 304
YS + + DR L L + + A I+++ G + + + G P+ +
Sbjct: 695 GYSQIIIYMSDRIDLFAATTAVLEQLNLNIVDARISSSEGPFSISSYIVLDEKGKPLGID 754
Query: 305 PERQ-----RVIQCLEAA------VGRRASEGVR--------------------LELCME 333
P R+ R+I+ L+ + RR ++ +E+
Sbjct: 755 PARKDRVRMRLIEELDDPEDYPDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVITP 814
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLLA V + E+ + +T A+++T + ++F+VTDE G +DP + +A++Q +
Sbjct: 815 DRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFVTDEHGEQISDPAVCQALQQDL 873
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 25/196 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R +G + + + +DR+ L + AVL L ++V+A++ + G + Y+ G
Sbjct: 689 RGGPTDGYSQIIIYMSDRIDLFAATTAVLEQLNLNIVDARISSSEGPFSISSYIVLDEKG 748
Query: 169 SPIE-DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP- 226
P+ D + DR+ RL L D + D + R P
Sbjct: 749 KPLGIDPARKDRVRMRLIEELDDPED-----------------------YPDIIHRRTPR 785
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
L+H VT N +V+ V DR LL V L + + +A I T GER
Sbjct: 786 QLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGER 845
Query: 287 AYLEFYIRHIDGTPIS 302
F++ G IS
Sbjct: 846 VEDVFFVTDEHGEQIS 861
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD +G +++D +V ++Q L
Sbjct: 838 KIATLGERVEDVFFVTDEHGEQISDPAVCQALQQDL 873
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + LA + +VV+A+ +T +G + +++D + G+P D+ ++ R+
Sbjct: 753 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDAD-GNPY-DATRLPRLRK 810
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G+ V TE + D+ +R + T +T N
Sbjct: 811 MIERTLMGE-------------VVTTE----AIKSRDKVKKRERAFKVPTH---ITFDNE 850
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL D+ TL + + +A I T GE+ FY++ + G
Sbjct: 851 GSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 910
Query: 303 SEPERQRVIQCLEAAV 318
S +++ + + L AA+
Sbjct: 911 SASKQRNLERRLRAAI 926
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 845 ITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDM 904
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 905 FGLKYYSASKQRNLERRL 922
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G D +R+ ++ R+L FA
Sbjct: 761 DN------PARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQC 313
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQA 879
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKIGLSNLKVKELPM 403
++ I + L V + P+
Sbjct: 877 LQAAI-VQQLSVTQEPV 892
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 753 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 812
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 813 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 854
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 855 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 907
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 908 RDVFYVTDLLGAQITA-PTRQAAIK 931
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 855 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 914
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 915 DLLGAQITAPTRQAAIKRAL 934
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 733 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 792
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 793 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 835 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 887
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 888 RDVFYVTDLLGAQITA-PTRQAAIK 911
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGAQITAPTRQAAIKRAL 914
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G D +R+ ++ R+L FA
Sbjct: 761 DN------PARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQC 313
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQA 879
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKIGLSNLKVKELPM 403
++ I + L V + P+
Sbjct: 877 LQAAI-VQQLSVTQEPV 892
>gi|404254714|ref|ZP_10958682.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26621]
Length = 914
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 722 GATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFDED 781
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q+ R++ + + L N ++ ++ + T E P+
Sbjct: 782 GQLLRLKKAIEDALA--NRVKLVDRLLAKPLPRTR------------AEAFPIA------ 821
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LL + L + + A + T GERA FY+
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 881
Query: 295 HIDGTPISSEPERQRVIQ--CLEAAVGRRASEGV 326
+ G I + R R I+ L AA G R E
Sbjct: 882 DLTGEKIGAG-SRLRTIERRLLSAAAGERLVEAA 914
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+++V++ R +L + L + I A++++ G +D F++
Sbjct: 821 APNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ S + IE+ L + G
Sbjct: 881 TDLTGEKIGAGSRLRTIERRLLSAAAG 907
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER--Q 308
V KDR L D+ ++ + V A + T+ + L+ F+++ + G P+ E R +
Sbjct: 762 VAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAPLGCENPRALR 821
Query: 309 RVIQCLEAAV--------GRRASEGVR----------------------LELCMEDRQGL 338
R+ LEAA RR E R +E DR GL
Sbjct: 822 RMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEASGRDRPGL 881
Query: 339 LADVTRTFRENGLNVTRAEVSTERDEALNIFYV-TDEMGNPAD 380
L + RT +NGL++ A + + A++ FYV T E G AD
Sbjct: 882 LQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGGKLAD 924
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VV+DN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 855 APTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYV 914
Query: 82 TDLNGNKLTDESVISYIEQSL 102
G KL D ++ ++ L
Sbjct: 915 QTSEGGKLADVRKVTTLKADL 935
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 307 RQRVIQCLEAAVGR--RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD- 363
R+ IQ AA GR + + + +DR+GL AD+ G NV A V T R
Sbjct: 737 RRAAIQGGAAAEGRVPAGANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQG 796
Query: 364 EALNIFYVTDEMGNP 378
+AL++F+V D G P
Sbjct: 797 QALDVFHVQDVTGAP 811
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ D SG+P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITD-KSGAPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ R+ ARL VL
Sbjct: 875 PERQQRLRARLIEVL 889
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E ++++ A+++T + ++F++TD+ G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R ++
Sbjct: 875 PERQQRLRARL 885
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 11 DEYEKLVIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
D+Y ++V R +TPR V+I+ TL+++ + R G+L ++ + +
Sbjct: 785 DDYPQIVTR-HTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQD 843
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTD 91
+ + A I++ G DVF +TD +G LTD
Sbjct: 844 ISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 797 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 838
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 839 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQ 312
FY+ + G I++ P RQ I+
Sbjct: 892 RDVFYVTDLLGAQITA-PTRQAAIK 915
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
>gi|418938172|ref|ZP_13491734.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
gi|375055173|gb|EHS51446.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
Length = 944
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + A ++ +A+++T +GR I + N
Sbjct: 721 RTHSFHAITEITVLSPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRALDTILI---NR 777
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
PI+D + + I + +VL G +K + T ++ + F
Sbjct: 778 EFPIDDDEMRRAATIGKMIEDVLSG------SKRLPEVIATRSKGKKKNKTF-------- 823
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
PV P V + N ++V+ V+C DR L ++ L D+ + A I T GE
Sbjct: 824 PV------QPDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGE 877
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
+ FY+ + G +++E + ++ L+A +
Sbjct: 878 KVIDTFYVMDLVGQKVTNENRQANIVNRLKAVM 910
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G L E L DL+L I A I++ G +D F+V
Sbjct: 827 PDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVM 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ + I L+ +
Sbjct: 887 DLVGQKVTNENRQANIVNRLKAV 909
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS N T +E+ DR+G L+E+ A LADL + A++ T ++ YV D G
Sbjct: 832 SNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVMDL-VG 890
Query: 169 SPIEDSQQIDRIEARLRNVL-KGDNDIRSAKMTVSMAVTHTERR 211
+ + + I RL+ V+ +G + R + S A+ +R
Sbjct: 891 QKVTNENRQANIVNRLKAVMTEGGEEPRDKEAPQSSAIAAPAQR 934
>gi|356548347|ref|XP_003542564.1| PREDICTED: uncharacterized protein LOC100816138 [Glycine max]
Length = 412
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
D +++ V C D+T L D+ + + ++T G+ Y+ F++ T S
Sbjct: 17 DGDPTLLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKQRTRWSL 76
Query: 304 EPERQRVIQC---LEAAVG----------RRASEGVRLELCMEDRQGLLADVTRTFRENG 350
++R+I+ +A G + S+ L C DR+GLL DVT E
Sbjct: 77 L--KKRLIEACPSFSSASGISYYRSDLQPSKPSDVFLLNFCCHDRKGLLHDVTEVLCELE 134
Query: 351 LNVTRAEVSTERD-EALNIFYVTD 373
L + + +VST D + +++F++TD
Sbjct: 135 LTIKKVKVSTTPDGKVIDLFFITD 158
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+++ +DR GLL D+ R+F + LNV RA++ST+ D ++ FY+ D+ G D ++++
Sbjct: 790 VDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVDKHGKKITDQRVLDN 849
Query: 387 VRQKIG 392
+R ++
Sbjct: 850 IRGELS 855
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQI 177
L + DR LLS++ L+ ++ AK++T N I + + SG + + +Q
Sbjct: 678 LIVCAKDRPALLSDICGALSSFSYNIKWAKIYTMENDVTIDNIMIANPFSGRKMPEDKQ- 736
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH--QMMFADRDYERMPVLRHSTDYP 235
+ ++ R+ N +K DI+ +T +E + +F +D
Sbjct: 737 ESLKKRIINTIKDGRDIKRQ-------ITQSESSIKGPAQVFIKKDK------------- 776
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+ N +Y++V++ KDR LL+D++ + E V A I+T +R FY+
Sbjct: 777 -IVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 296 IDGTPISSEPERQRVIQCLEAAVGR 320
G I+ QRV+ + + +
Sbjct: 836 KHGKKITD----QRVLDNIRGELSK 856
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++V DN V T+V + + R G+L + ++ L +++A IS+D +D F++ D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 84 LNGNKLTDESVISYIEQSL 102
+G K+TD+ V+ I L
Sbjct: 836 KHGKKITDQRVLDNIRGEL 854
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|255585359|ref|XP_002533376.1| amino acid binding protein, putative [Ricinus communis]
gi|223526783|gb|EEF29007.1| amino acid binding protein, putative [Ricinus communis]
Length = 413
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 30/300 (10%)
Query: 25 VVIDNAVCP-TATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
VVI A P +T++ V+ + G+ + +++ L I + + +DG++ V V
Sbjct: 9 VVISQAEKPGDSTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLQTDGKWCYIVLWVVG 68
Query: 84 LNGNKLTD------ESVISYIEQSLETIHYGRSNSFNGLTALEL---TGTDRVGLLSEVF 134
+ + E SY S + + + L DR GLL +V
Sbjct: 69 KPSTRWSLLKMRLLEVCPSYFSTSEISYYRPKDQQPKKPDVFLLKFWCSYDREGLLHDVT 128
Query: 135 AVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN- 192
VL +L+ ++ KV T +GR+ L ++ D + + + + L++VL GD
Sbjct: 129 EVLCELELTIKRVKVSTAPDGRVMDLFFITD--TRELLHTKHRQEETIHYLKDVL-GDAL 185
Query: 193 ---DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS---TDYPV-VTVQNWADR 245
+I SA V+ A + L + D +P + T PV V++ N R
Sbjct: 186 ISCEIESAGAEVT-ACSQGSSLLPSAITEDMFNMELPDKQRKGFLTPNPVSVSMDNTLSR 244
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFYIRHIDGTPI 301
S++++ CKD L++D++ TL D + Y F+AT E ++ +I DG I
Sbjct: 245 SHTLLQFLCKDHKGLMYDIMRTLKDYNIQISYGRFYATPKGHCE---VDLFIMQADGKKI 301
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 331 CMEDRQGLLADVTRTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
C DR+GLL DVT E L + R +VST D +++F++TD
Sbjct: 116 CSYDREGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFITD 159
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++NA+ T++++ R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 85 NGNKLTD 91
G K+ +
Sbjct: 902 TGQKIAN 908
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LE+ DR GLL D+TR+ LN+ A +ST ++ +++FYVTD G KI
Sbjct: 855 LEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQ----KIANIG 910
Query: 388 RQKI 391
RQ+I
Sbjct: 911 RQEI 914
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 36/217 (16%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSP 170
+F G+T L + D LLS + ++V+A++ T +G I++ G
Sbjct: 737 AFEGVTELTIKAPDHPRLLSIIAGACYATGANIVDAQIDTTTDGYALDTIFI-----GRE 791
Query: 171 IEDSQ----QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RM 225
+ D + + +RI A + L+G E RL + + + RM
Sbjct: 792 LPDDEDEKRRGERITALIETTLRG------------------EERLPEPVSKKTGVKGRM 833
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ +++ V V N Y+V+ + DR LL+D+ ++ + + A I+T GE
Sbjct: 834 KAFKVASE---VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGE 890
Query: 286 RAYLEFYIRHIDGTPISS----EPERQRVIQCLEAAV 318
+ FY+ + G I++ E R+R+ +E V
Sbjct: 891 KVVDVFYVTDLTGQKIANIGRQEIIRERLADAVEGHV 927
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|383642646|ref|ZP_09955052.1| PII uridylyl-transferase [Sphingomonas elodea ATCC 31461]
Length = 915
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + + ++++A++ T +A ++ G P ++
Sbjct: 723 GATLVTVYAADHPGLFYRIAGAIHVAGGNIIDARIHTTRDGMALDNFLVQDPFGQPFDEE 782
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+++R+ K ++ A+ + R ++R + PV + +
Sbjct: 783 ARLNRL-----------------KTGIADALANRAR------LSERLKTKAPVRLRADAF 819
Query: 235 ---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P V + N A ++V+ V +DR LL+ + L + + A + T GERA F
Sbjct: 820 SIEPNVFIDNKASNRFTVIEVNARDRPALLYSLANALFQSKVTIHSAHVATYGERAVDTF 879
Query: 292 YIRHIDGTPISSEPERQRVIQ--CLEAAVG 319
Y+ + G ISS R + I+ LEAA G
Sbjct: 880 YLTDLIGDKISST-SRLKTIERRLLEAAAG 908
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L L + I A++++ G +D F++T
Sbjct: 823 PNVFIDNKASNRFTVIEVNARDRPALLYSLANALFQSKVTIHSAHVATYGERAVDTFYLT 882
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K++ S + IE+ L
Sbjct: 883 DLIGDKISSTSRLKTIERRL 902
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERAR 890
Query: 289 LEFYIRHIDGTPISSEPERQRVIQC 313
FY+ + G I++ P RQ I+
Sbjct: 891 DVFYVTDLLGAQINA-PTRQAAIKS 914
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
>gi|356572480|ref|XP_003554396.1| PREDICTED: uncharacterized protein LOC100818216 [Glycine max]
Length = 412
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+V+ V C D+T L D+ + + ++T G+ Y+ F++ + + R
Sbjct: 21 TVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWV-------VGKQRAR 73
Query: 308 QRVIQ--CLEAAVGRRASEGVR----------------LELCMEDRQGLLADVTRTFREN 349
+++ +EA ++ G+ L+ C DR+GLL DVT E
Sbjct: 74 WSLLKKRLIEACPSCSSASGISYYRSELQPPKPPDVFLLKFCCHDRKGLLHDVTEVLSEL 133
Query: 350 GLNVTRAEVSTERD-EALNIFYVTD 373
L + + +VST D + +++F++TD
Sbjct: 134 ELIIHKVKVSTTPDGKVVDLFFITD 158
>gi|242086641|ref|XP_002439153.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
gi|241944438|gb|EES17583.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
Length = 447
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 155/389 (39%), Gaps = 56/389 (14%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T++ V+ + G+ + + + + L I + +S+DG + VF V +
Sbjct: 45 TVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIKIRWASL 104
Query: 87 -NKLTDESVISY-IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
N+L SY I + G S + L+L DR GLL +V +L+DL+ +
Sbjct: 105 KNRLMSMCPSSYSIPFYPDISQPGPSQYY----LLKLLSPDRKGLLHDVTHILSDLELII 160
Query: 145 VEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG-----DNDIRSA- 197
KV T +GR+ L ++ D +E + +R E ++ ++ SA
Sbjct: 161 HRVKVCTTPDGRVVDLFFITD-----GMELLHKKERQEETCSTLIATLGPSISCEVLSAE 215
Query: 198 --KMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ S L ++ AD + + V + N ++++V +
Sbjct: 216 GFQQGFSSLPPKIAEELFRVELADSEICSSSLSVELKKVQTATINFDNSLSPAHTLVQII 275
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY------LEFYIRHIDGTPISSEPER 307
C D+ L++D++ T+ D +F+ + + + ++ +++ +DG + +PE+
Sbjct: 276 CADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSVSKGCREVDLFVKQVDGKKV-MDPEK 334
Query: 308 Q---------RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFRENGLNV 353
Q ++ L + R + L EL + R + D T + G+ +
Sbjct: 335 QDALRSRLRSEMLHPLRVMIVSRGPDTELLVANPVELSGKGRPRVFYDATLALKALGICI 394
Query: 354 TRAEV----STERDEALNIFYVTDEMGNP 378
AE+ ++ER + F + D P
Sbjct: 395 FSAEIGRQAASERQWEVYRFLLDDSKEFP 423
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
A+ +V+ V C D+ L D+ T+ + + ++T G ++ F++ P S
Sbjct: 40 AEGEETVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWV-----VPRS 94
Query: 303 SEPE------RQRVIQCLEAAVG---------RRASEGVRLELCMEDRQGLLADVTRTFR 347
S + + R++ ++ S+ L+L DR+GLL DVT
Sbjct: 95 SSIKIRWASLKNRLMSMCPSSYSIPFYPDISQPGPSQYYLLKLLSPDRKGLLHDVTHILS 154
Query: 348 ENGLNVTRAEVSTERD-EALNIFYVTDEM 375
+ L + R +V T D +++F++TD M
Sbjct: 155 DLELIIHRVKVCTTPDGRVVDLFFITDGM 183
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 14 EKLVIRMNTP------------RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
E L+ R +TP +V DN + T++ V + + G+L + + V DL +
Sbjct: 749 EDLIKRASTPFFKKKIPKEIKKKVEFDNEISSNYTVIDVFTEDKIGLLYKILSVFEDLGI 808
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
++KA IS+D +D F+VTD N +K+T+++ I I+ SL
Sbjct: 809 NVQKAKISTDVDRVVDSFYVTDKNYHKITEQTFIDKIKFSL 849
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
+S +++ ED+ GLL + F + G+NV +A++ST+ D ++ FYVTD+
Sbjct: 779 SSNYTVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDK 831
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +++ D++GLL ++ +V DL +V +AK+ T R+ YV D N I +
Sbjct: 783 TVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDKNY-HKITEQTF 841
Query: 177 IDRIEARLRNVL 188
ID+I+ L V+
Sbjct: 842 IDKIKFSLMEVI 853
>gi|46143705|ref|ZP_00134550.2| COG2844: UTP:GlnB (protein PII) uridylyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208080|ref|YP_001053305.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|126096872|gb|ABN73700.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|307261058|ref|ZP_07542738.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869235|gb|EFN01032.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|307256623|ref|ZP_07538403.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864871|gb|EFM96774.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|195626784|gb|ACG35222.1| amino acid binding protein [Zea mays]
Length = 443
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 155/393 (39%), Gaps = 60/393 (15%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T++ V+ + G+ + + + + L I + +S+DG + VF V +
Sbjct: 37 TVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIRIRWASL 96
Query: 87 -NKLTDESVISY-IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
N+L SY I + G S + L+L DR GLL +V +L+DL+ +
Sbjct: 97 KNRLMSMCPSSYSIPFYPDMSQPGPSQFY----LLKLLSPDRKGLLHDVTHILSDLELII 152
Query: 145 VEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG-----DNDIRSA- 197
KV T +GR+ L ++ D +E + +R E ++ ++ SA
Sbjct: 153 HRVKVSTTPDGRVVDLFFITD-----GMELLHKKERQEETCSTLIAALGPSISCEVLSAE 207
Query: 198 ---KMTVSMAVTHTERRLHQMMFADRDYERMPVLR---HSTDYPVVTVQNWADRSYSVVN 251
+ S+A E + D + ++ + N ++++V
Sbjct: 208 GFQQGFSSLAPEIAEELFRVELAGDGEMCSSSLISAELKKVQTATINFDNSLSPAHTLVQ 267
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATINT------AGERAYLE--FYIRHIDGTPISS 303
+ C D+ L++D++ T+ D +F+ + G + E +++ +DG + +
Sbjct: 268 IICADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGGRPGSKGCREVDLFVKQVDGKKV-T 326
Query: 304 EPERQ---------RVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTRTFREN 349
+PE+Q ++ L V R + L ELC + R + T +
Sbjct: 327 DPEKQDALRARLRSEMLHPLRVMVVSRGPDTELLVANPVELCGKGRPRVFYXATLALKAX 386
Query: 350 GLNVTRAEV----STERDEALNIFYVTDEMGNP 378
G+ + AE+ ++ER + F + D P
Sbjct: 387 GVCIFSAEIGRQAASERQWEVYRFLLDDSREFP 419
>gi|165976013|ref|YP_001651606.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876114|gb|ABY69162.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 850
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|357476529|ref|XP_003608550.1| Uridylyl transferases-like protein [Medicago truncatula]
gi|355509605|gb|AES90747.1| Uridylyl transferases-like protein [Medicago truncatula]
Length = 109
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKIGLSNL 396
GLL+ VT+ ENGL++TR E E + A+ YVT G + I+E ++++IG S +
Sbjct: 2 GLLSKVTQVIHENGLSITRIEFGVEGEAAIGSLYVTGCSGQDVNENIVELIKREIGGSIV 61
Query: 397 KVKELP 402
+ P
Sbjct: 62 LAQSSP 67
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+N T+++V R G+L + ++ L+L I A++++ G DVF+VT
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 910 DLMGAQITAPTRQAAIKRAL 929
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 235 PVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P V + N W+D Y+V+ V DR LL+ + ++ + + A + T GER FY+
Sbjct: 850 PEVVINNQWSD-VYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYV 908
Query: 294 RHIDGTPISSEPERQRVIQ 312
+ G I++ P RQ I+
Sbjct: 909 TDLMGAQITA-PTRQAAIK 926
>gi|386393406|ref|ZP_10078187.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
gi|385734284|gb|EIG54482.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
Length = 881
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
L + V VLA S+ +A V+ +G + +++ + N + + R+ +R L
Sbjct: 702 LFATVAGVLALHDLSIRDADVFVWDGGV-TILSLTTGNPPDVLYADEVFARVSRAIRYTL 760
Query: 189 KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYS 248
G + +A ++R + R PV T PVV + N A ++
Sbjct: 761 SG---------KLFLAYRLAKKRASFL-------SRPPVAGPRTP-PVVLLDNRASDLFT 803
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
V+ V C DR LL+D+ TL ++ A + T R FY+R DG + +PE+
Sbjct: 804 VIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRV-EDPEQA 862
Query: 309 RVIQC 313
I+
Sbjct: 863 EEIKA 867
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +E+ DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +
Sbjct: 802 FTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGAD-GRRVEDPE 860
Query: 176 QIDRIEARLRNVLKGD 191
Q + I+A L + L D
Sbjct: 861 QAEEIKAALLHRLADD 876
>gi|307251346|ref|ZP_07533262.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306856587|gb|EFM88727.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 850
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T D G+ + + LA + +VV+A+ +T +G + +++D + G+ E
Sbjct: 749 GATRASFVMADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQD-SEGNAYEA 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
S+ + R+ + L+G+ R A + V ER ++P H
Sbjct: 808 SR-LPRLRDTIEKTLRGEIVARDA-LKSRDKVKKRERAF-----------KVPT--H--- 849
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
+T N Y+++ V +DR LL+D+ TL + +A I T GE+ FY+
Sbjct: 850 ---ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYV 906
Query: 294 RHIDGTPISSEPERQRVIQCLEAAV--GRRASEG 325
+ + G +E +++ + + L A+ G + +EG
Sbjct: 907 KDMFGLKYYTEAKQRTLEKRLREAIVAGVQRAEG 940
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 850 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDM 909
Query: 85 NGNKLTDESVISYIEQSL 102
G K E+ +E+ L
Sbjct: 910 FGLKYYTEAKQRTLEKRL 927
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRH 230
+ Q++ +I L + L+ +D S + H R+P L+H
Sbjct: 761 NNPQRVKQIRDGLSDALRNPDDYPS--------IIH---------------RRVPRQLKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P VT+ N A R +++ + DR LL + D + + +A I T GER
Sbjct: 798 FAFPPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDV 857
Query: 291 FYIRHIDGTPIS 302
F+I D P+S
Sbjct: 858 FFITDADNQPLS 869
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ D +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
D + L+D + S ++ ++ + R + +G + LT
Sbjct: 862 DADNQPLSDPQLCSRLQDAI--VEQLRVDQASGTESFRLT 899
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F + L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
++ I
Sbjct: 877 LQDAI 881
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+N T+++V R G+L + ++ L+L I A++++ G DVF+VT
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 928 DLMGAQITAPTRQAAIKRAL 947
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA--SLIYVKDCNSGSPIE 172
+T L L D LLS V A ++V+A+++T +A ++ ++ + +
Sbjct: 768 AVTELTLLAPDHPWLLSIVAGACAANGANIVDAQIYTTTDGLALDTIAISREYDRNE--D 825
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++++ RI + VL+G + RL ++M A R R
Sbjct: 826 EARRASRIGEMIEQVLEG------------------KVRLPEVM-ARRTQARAKTKVFVV 866
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
+ VV W+D Y+V+ V DR LL+ + ++ + + A + T GER FY
Sbjct: 867 EPEVVINNQWSD-VYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFY 925
Query: 293 IRHIDGTPISSEPERQRVIQ 312
+ + G I++ P RQ I+
Sbjct: 926 VTDLMGAQITA-PTRQAAIK 944
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 21 NTPR----VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFM 76
N PR V++D T+++V + R G+L L L++ I+ A IS+ G
Sbjct: 771 NLPRKDDIVLVDEEASDFYTIIEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVA 830
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSL 102
DVF+VTDL+GNKL D + I SL
Sbjct: 831 DVFYVTDLSGNKLMDYEMHEKIRVSL 856
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 222 YERMPVLRHS-TDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
+ + + +H +D P+V + +D ++ + + + KD+ L + L + +
Sbjct: 677 WHALALFKHGDSDKPLVLIGETSDLAFEGATQIFIYMKDQPHLFAAMTAALDQLHLNIQD 736
Query: 278 ATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQC-LEAA----------VGRRASEGV 326
A I T+ L+ Y+ + ++P R IQ LE A + RR S +
Sbjct: 737 ARIITSANNNALDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQRRTSRQL 796
Query: 327 R--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEAL 366
+ LE+ DR GLLA + + F + L++ A++ TE +
Sbjct: 797 KQFEFEPTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERID 856
Query: 367 NIFYVTDEMGNP-ADPKIIEAVRQKI 391
+IFY+TD G+P +DP+ ++Q +
Sbjct: 857 DIFYITDANGDPISDPEFCMELQQAV 882
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 29/171 (16%)
Query: 55 VLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD----ESVISYIEQSL------- 102
L L+L I+ A I+S +D + V D NG+ +TD E + S +E++L
Sbjct: 726 ALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFP 785
Query: 103 ----------------ETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
E + ++ ++ T LE+ DR GLL+ + + D S+
Sbjct: 786 NLIQRRTSRQLKQFEFEPTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLET 845
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSA 197
AK+ T RI + Y+ D N G PI D + ++ + N L +++++
Sbjct: 846 AKIMTEVERIDDIFYITDAN-GDPISDPEFCMELQQAVVNALSDQLELQAS 895
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P I N TL++V + R G+L ++ D NL ++ A I ++ D+F++T
Sbjct: 803 PTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT 862
Query: 83 DLNGNKLTDESVISYIEQSL 102
D NG+ ++D ++Q++
Sbjct: 863 DANGDPISDPEFCMELQQAV 882
>gi|357635440|ref|ZP_09133318.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
gi|357583994|gb|EHJ49327.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
Length = 905
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 19/185 (10%)
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
L + V VLA S+ +A V+ +G + +++ + N + + R+ +R L
Sbjct: 726 LFATVAGVLALHDLSICDADVFVWDGGV-TILSLTTGNPPDVLYADEVFARVSRAIRYTL 784
Query: 189 KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYS 248
G + +A ++R + R P PVV + N A ++
Sbjct: 785 SG---------KLFLAYRLAKKRASFLSRPPAAGPRTP--------PVVLLDNRASDLFT 827
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
V+ V C DR LL+D+ TL ++ A + T R FY+R DG + +PE+
Sbjct: 828 VIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRV-EDPEQA 886
Query: 309 RVIQC 313
I+
Sbjct: 887 EEIKA 891
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +E+ DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +
Sbjct: 826 FTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGAD-GRRVEDPE 884
Query: 176 QIDRIEARLRNVLKGD 191
Q + I+A L + L D
Sbjct: 885 QAEEIKAALLHRLADD 900
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+PRV+ DN T+++V++ R +L +VL + L++ A+I+ G +D F+V
Sbjct: 824 SPRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYV 883
Query: 82 TDLNGNKLT 90
TDL G KL
Sbjct: 884 TDLTGGKLA 892
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 20/205 (9%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + +D GL + + ++++A++ T A ++ G+P +
Sbjct: 725 GATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTGWALDNFLVQDPHGAPFREE 784
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
QQ++R++ + + L N I + H+ + +
Sbjct: 785 QQLERLKKSIADALA--NRIDLTPKLAQRPLPHSRSKAFDVS------------------ 824
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V N A ++V+ V +DR LL + L + VV A I GERA FY+
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 295 HIDGTPISSEPERQRVIQCLEAAVG 319
+ G ++ + R+ L A G
Sbjct: 885 DLTGGKLAGGERQDRLEARLIDAAG 909
>gi|374623042|ref|ZP_09695559.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
gi|373942160|gb|EHQ52705.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
Length = 898
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R + G T + L D L + L L +V+A++ T ++ ++G
Sbjct: 701 RQETARGSTEIFLYTRDHPHLFALTATALTQLGLDIVDARIITTRTDRTLDTFLVLEDTG 760
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
PI ++++ I LR L D D R + + T RRL A +
Sbjct: 761 QPIASAERVQEIGRLLRERLN-DPDKRPGVIRRT-----TPRRLKHFDVATQ-------- 806
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V+ + +V+++ DR LL + L D V++A I TAGE+A
Sbjct: 807 --------VSFDPLPHHNRTVLSISTADRPGLLSRIGIVLMDCGVKVYNAKIATAGEQAD 858
Query: 289 LEFYIRHIDGTPISSEPERQRVI 311
FY+ ++ PI +PER+++I
Sbjct: 859 DVFYVTELNDQPI-QDPERRQLI 880
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 227 VLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + + + + D+ V ++ + + A I T
Sbjct: 680 ILQHPNDGGPLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ Y+ DG I + P R + +I+ L+ + RR ++
Sbjct: 740 STSQFTLDTYVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LEL DR GLLA + R F E L++ A+++T + ++F+
Sbjct: 800 FAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
+TD+ G P +DP++ +++ I
Sbjct: 860 ITDDKGQPLSDPELCARLQETI 881
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I + L + H+ +++ +T LELT D
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D + G P+ D + R++
Sbjct: 824 RPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPELCARLQ 878
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD G L+D + + +++++
Sbjct: 861 TDDKGQPLSDPELCARLQETI 881
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E + ++ A+++T + ++F++T++ G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R+++
Sbjct: 875 PERQQQLRERL 885
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + ++ AK+ T R+ + ++ + +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITN-KAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 129 LLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
L + A + L S+ +A++ T HN + V D N G PI D ++I+ + L
Sbjct: 722 LFAATAAAMEQLGLSIHDARIATSHNNWTLNTFIVLD-NVGQPIRDLERIEEMRQHLVEE 780
Query: 188 LKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSY 247
L +D + HT R+L ++P V+ Q+ A+
Sbjct: 781 LDDPDDY------PDIVSRHTPRQLKHF--------KVPT-------EVLIEQDPANER- 818
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+++ + DR LL V + + + A I T GER F+I + G P+ ++PER
Sbjct: 819 TLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPL-TDPER 877
Query: 308 QRVIQ 312
Q+ ++
Sbjct: 878 QQQLR 882
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGDSIG 759
Query: 173 DSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ ++ +I L + L+ +D T +RR+ + L+H
Sbjct: 760 DNPVRVKQIRDGLTDALRNPDDY----------PTIIQRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
T P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 798 TFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I D P+S
Sbjct: 858 FITDADNLPLS 868
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSR 875
Query: 387 VRQKI 391
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 860 TDADNLPLSDPQLCSRLQDAI 880
>gi|357160225|ref|XP_003578696.1| PREDICTED: uncharacterized protein LOC100833127 [Brachypodium
distachyon]
Length = 421
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 44/324 (13%)
Query: 17 VIRMNTPRVVIDNAV----CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
V+++ P V D V CP T + D R V +L LN+L K +S+DG
Sbjct: 8 VVQIRHPDVAGDPTVVTISCPDKTGLGCDLCR--------VVLLFGLNVL--KGDMSTDG 57
Query: 73 RFFMDVFHVT---------DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA----- 118
R+ V V DL +L + +S + L++ + + L
Sbjct: 58 RWCYIVLWVVARRGRTMAWDLLKERLVELCPVSSL-CGLDSSYLAAAGLQEDLEPAAPRV 116
Query: 119 --LELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQ 175
L+ + DR+GLL +V VL++++ ++ KV T +GR+ L ++ D + +
Sbjct: 117 FLLKFSCYDRMGLLHDVTHVLSEMELTIRRVKVSTTPDGRVMDLFFITD--ARDLLHTKN 174
Query: 176 QIDRIEARLRNVLKGDN----DIRSAKMTVSMAVTHT---ERRLHQMMFADRDYERMPVL 228
+ + +L++VL GD+ +I A +S + + + + MF E
Sbjct: 175 RREEAYEKLQSVL-GDSVTSCEIECATEDMSSCLQASALLPPLVVEQMFNTDLIEEQLSR 233
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-GERA 287
S+ VT+ N +S++ +QC D LL+D++ TL D + + ++ +R
Sbjct: 234 SRSSSKLSVTMDNSLSPVHSLIQIQCGDHKGLLYDIMRTLKDCDIQISYSRFYAGRKDRC 293
Query: 288 YLEFYIRHIDGTPISSEPERQRVI 311
++ + DG I + ++QR +
Sbjct: 294 EVDLFAVQSDGKKILDQ-QKQRAL 316
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
E+ DR GLL + R ++GL+V A+V T +A+++FYVTD G P E V
Sbjct: 699 FEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGKPLSEAAAEEV 758
Query: 388 RQKI 391
R+ +
Sbjct: 759 RRAL 762
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VV+ A AT+ +V + R G+L ++L+D L ++ A + + G +DVF+VT
Sbjct: 684 PPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVT 743
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D G L+ E+ + ++LET
Sbjct: 744 DTAGKPLS-EAAAEEVRRALET 764
>gi|384085460|ref|ZP_09996635.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 865
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 80 HVTDLNGNKLTDESVISYIEQ-----SLETIHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
H++ ++ ++ ++ +I+Q S +T+ R++ G L + G DR GL ++
Sbjct: 639 HLSGAYFSRYSENELLWHIQQILAHKSRKTLVAVRAHQPEGSEIL-IYGPDRPGLFQQIT 697
Query: 135 AVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
L ++++A++ T +GR V D NS + Q + ARLR +++G+ +
Sbjct: 698 GALDRQSLNIIDARIDTSEDGRAIDTFLVID-NSHAFARTEQADQDLAARLRAIIEGETE 756
Query: 194 IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ + H + R FA R E + V N A Y+++ V+
Sbjct: 757 SKP-----HFGLRHRDPR--HRFFAQRPAE-------------IRVDNHALSRYTLLEVR 796
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
D LL+ V L ++ + A ++T GER F+I
Sbjct: 797 AADHLGLLYRVGEVLRTLQLNIHGAKVSTFGERVEDTFFI 836
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI-- 293
VV Q+ + +V+ V C D+T L D+ + + ++T G+ YL F++
Sbjct: 10 VVIRQSEKEGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYLVFWVVG 69
Query: 294 -----------RHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADV 342
R ++ P S + R + L+L +DR+GLL DV
Sbjct: 70 KSTTRWGLLKKRLVEACPSCSSASGLSFYR--SELQPPRPPDVFLLKLSCQDRRGLLHDV 127
Query: 343 TRTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
T E L + + +VST D +++F++TD
Sbjct: 128 TSVLCELELTIKKVKVSTTPDGRVIDLFFITD 159
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDE 92
T++ V+ + G+ + +++ L I + +S+DG++ VF V + + L +
Sbjct: 21 PTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYLVFWVVGKSTTRWGLLKK 80
Query: 93 SVISYIEQ--SLETIHYGRSN----SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++ S + + RS + L+L+ DR GLL +V +VL +L+ ++ +
Sbjct: 81 RLVEACPSCSSASGLSFYRSELQPPRPPDVFLLKLSCQDRRGLLHDVTSVLCELELTIKK 140
Query: 147 AKV-WTHNGRIASLIYVKD----CNSGSPIEDSQQIDRIEARLRN-VLKGDNDIRSAKMT 200
KV T +GR+ L ++ D ++ ED+ D ++A N ++ D +I ++T
Sbjct: 141 VKVSTTPDGRVIDLFFITDNRELLHTNKRKEDT--CDHLKAVTGNSMISCDIEIVGPEIT 198
Query: 201 VSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
A + + + + + +P ST V + N +++V + C+D
Sbjct: 199 ACSAESSFLPTAITENILPLEMPDELPSSLTSTSV-SVNMDNSLSPGHTLVQIVCQDHKG 257
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERAY-LEFYIRHIDGTPISSEPERQRVI 311
LL+D++ TL D + + + RA ++ ++ DG I +P +Q+ +
Sbjct: 258 LLYDIMRTLKDYNIQISYGRFSMNHGRACDIDLFLVQTDGKKI-VDPRKQKAL 309
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 30/218 (13%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS- 174
L + + DR GL S++ VL ++ +A+++T A I+ SP DS
Sbjct: 682 LRTVTVCAKDRPGLFSKIAGVLTLNNLNIFDAQIFTWRNHTAMDIF-----QVSPPLDSL 736
Query: 175 ---QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ R+E L VL G+ D+ A L A D LR
Sbjct: 737 FEKRTWQRVERDLGKVLSGEMDLSKA--------------LEDKPVAKSDDNSASALRRE 782
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
V+V N + +++V V D+ LL+ + L ++ A I T ++ F
Sbjct: 783 R----VSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVF 838
Query: 292 YIRHIDGTPISSEPERQRVIQ--CLEAAVGRRASEGVR 327
Y+R DG + S PE I+ LE G R ++GV+
Sbjct: 839 YVRDFDGQKVDS-PESVDAIKQTVLETLHGERNNKGVK 875
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV +DN T+V+V + + G+L + L L I A I++ +DVF+V D
Sbjct: 783 RVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRD 842
Query: 84 LNGNKLTDESVISYIEQS-LETIHYGRSNSFNGLTALELTG 123
+G K+ + I+Q+ LET+H R+N L TG
Sbjct: 843 FDGQKVDSPESVDAIKQTVLETLHGERNNKGVKPAGLGETG 883
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKIIEA 386
+E+ D+ GLL +T GL++ A+++T+ D+ +++FYV D G D P+ ++A
Sbjct: 797 VEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESVDA 856
Query: 387 VRQKI 391
++Q +
Sbjct: 857 IKQTV 861
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E ++++ A+++T + ++F++T + G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R+++
Sbjct: 875 PERQQQLRERL 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E ++++ A+++T + ++F++T + G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R+++
Sbjct: 875 PERQQQLRERL 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|332288112|ref|YP_004418964.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
gi|330431008|gb|AEC16067.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
Length = 877
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA--GERAYLEFYI 293
VV V + R + + + C D+ +L VV TL + A I TA GE + F +
Sbjct: 688 VVLVSSRFSRGATEIFIYCADQPQLFNKVVRTLDAKNLSIHDAQIITAESGE-VFDSFIV 746
Query: 294 RHIDGTPISSEPERQRVIQCLEA----------AVGRRAS-------------------E 324
DG+ + + R + Q L+A A RR+S E
Sbjct: 747 TENDGSALR-KSRRDEIAQVLKAVLKGEKRVPTATARRSSKLQHFNVPLEVCFLNIEKTE 805
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
LEL +DR GLLA ++ F + L ++ A+++T ++A + F +T+E G
Sbjct: 806 QTELELITKDRAGLLAIISDIFTQQRLTLSNAKITTNGEKAEDFFILTNEKG 857
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E ++++ A+++T + ++F++T + G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R+++
Sbjct: 875 PERQQQLRERL 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 802 ---PQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCRRLQEAI 881
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV I N T++++ + R G+L ++ D +L I+ A I++ G DVF V
Sbjct: 801 APRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N +L+D + + +++++
Sbjct: 861 TDANNQQLSDPELCTRLQETI 881
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 29/152 (19%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDESV-ISYIEQSL 102
+H V + LNL I A I +S +F +D + V + +G+ + D I I Q L
Sbjct: 714 QHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEGDGSSIGDNPARIKQIRQGL 773
Query: 103 --------------------ETIHYG-------RSNSFNGLTALELTGTDRVGLLSEVFA 135
+ H+ +++ LT +ELT DR GLL+ V
Sbjct: 774 IDALINPDDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGR 833
Query: 136 VLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
+ D S+ AK+ T R+ + +V D N+
Sbjct: 834 IFLDFDLSIQNAKIATLGERVEDVFFVTDANN 865
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 227 VLRHSTD-YPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+++H D P+V ++ R + + + + +D+ V + + + A I T
Sbjct: 680 IIQHPNDGNPLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCL------EAAVGRRASEGVR--- 327
+ + L+ YI DG+ I P R Q +I L + + RR ++
Sbjct: 740 STSQFTLDTYIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFD 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
+EL DR GLLA V R F + L++ A+++T + ++F+
Sbjct: 800 FAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
VTD +DP++ +++ I
Sbjct: 860 VTDANNQQLSDPELCTRLQETI 881
>gi|303252229|ref|ZP_07338397.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247572|ref|ZP_07529616.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649012|gb|EFL79200.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855937|gb|EFM88096.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 850
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSP 170
S G + + D GL S + V+A +++ A++ T NG+ ++ V + G
Sbjct: 710 SDGGYSNFTICTLDVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQV-NSPQGFI 768
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
I D + R+ LR VL G + S +R + A++ R
Sbjct: 769 ITDVGRWKRVNEDLRQVLTGKTPVASL----------VAKRQRPTLLAEKAKPRFSAR-- 816
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
V + N Y+V+++ D+ +L+ + TLT++ + + I+T ++
Sbjct: 817 ------VEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADV 870
Query: 291 FYIRHIDGTPISSEPE-----RQRVIQCLE 315
FY++ I G I++ PE R+R+++ +E
Sbjct: 871 FYVKDIFGHKITN-PERLEEIRERLLKAVE 899
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+ RV IDN V T++ + + + GIL + LT+L L I + IS+ DVF+V
Sbjct: 814 SARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYV 873
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G+K+T+ + I + L
Sbjct: 874 KDIFGHKITNPERLEEIRERL 894
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 299 TPISS-EPERQRVIQCLEAAVGRRA----------SEGVRLELCMEDRQGLLADVTRTFR 347
TP++S +RQR E A R + S+ +++ D+ G+L +T T
Sbjct: 790 TPVASLVAKRQRPTLLAEKAKPRFSARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLT 849
Query: 348 ENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
E GL + +++ST+ D+ ++FYV D G+ +P+ +E +R+++
Sbjct: 850 ELGLYIGVSKISTKVDQVADVFYVKDIFGHKITNPERLEEIRERL 894
>gi|332187387|ref|ZP_08389125.1| protein-P-II uridylyltransferase [Sphingomonas sp. S17]
gi|332012548|gb|EGI54615.1| protein-P-II uridylyltransferase [Sphingomonas sp. S17]
Length = 914
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 26/192 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D GL + + ++++A++ T +A ++ G P +D
Sbjct: 722 GATLVSIYAADHPGLFYRIAGAIHVAGGNIIDARIHTTRDGMAIDNFLVQDPLGRPFDDP 781
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
Q+ R+ + + L N + ADR + V + +
Sbjct: 782 GQLSRLRRAIEDALANRNKL-----------------------ADRLVAKPSVRPRADAF 818
Query: 235 PV---VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+ V + N A ++VV V +DR LL + L + + A + T GERA F
Sbjct: 819 PIAPNVLIDNRASNRFTVVEVHARDRPALLNQLAHALFQSKVTIHSAHVATYGERAVDVF 878
Query: 292 YIRHIDGTPISS 303
Y+ + G I++
Sbjct: 879 YLTDLTGDRITN 890
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+V+V + R +L + L + I A++++ G +DVF++
Sbjct: 821 APNVLIDNRASNRFTVVEVHARDRPALLNQLAHALFQSKVTIHSAHVATYGERAVDVFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+++T+ + +E+ L
Sbjct: 881 TDLTGDRITNSGRLKTLEKRL 901
>gi|303251535|ref|ZP_07337709.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252152|ref|ZP_07534051.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649533|gb|EFL79715.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860452|gb|EFM92466.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 850
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYI 293
P+V V N R + + + C+D+ +L + L+ + + A I T+ L+ F +
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 294 RHIDGTPI-----------------SSEPE---------------RQRVIQCLEAAVGRR 321
++G P+ +SEP+ RQ ++ L + R
Sbjct: 719 TELNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLVDSQQNR 778
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ EL DR+GLLA V+ F + GLN+ A+++T + + F VT + D
Sbjct: 779 TA----FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDD 834
Query: 382 KIIEAVR 388
K +A++
Sbjct: 835 KAQKALK 841
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 227 VLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + + + + D+ V ++ + + A I T
Sbjct: 680 ILQHPNDGGPLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPER-----QRVIQCLE------AAVGRRASEGVR--- 327
+ + L+ Y+ DG I + P R + +I+ L+ + RR ++
Sbjct: 740 STSQFTLDTYVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LEL DR GLLA + R F E L++ A+++T + ++F+
Sbjct: 800 FAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
+TD+ G P +DP+ +++ I
Sbjct: 860 ITDDKGQPLSDPEFCARLQEAI 881
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I + L + H+ +++ +T LELT D
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D + G P+ D + R++
Sbjct: 824 RPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPEFCARLQ 878
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD G L+D + +++++
Sbjct: 861 TDDKGQPLSDPEFCARLQEAI 881
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H P+V V A R + + + DR L V L V A I T+ +
Sbjct: 681 LLVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQR-VIQCLEAAVG---------RRASEGVR-------- 327
++ F + DG+P+S P+R +IQ LE A+ RR S +R
Sbjct: 741 MAMDTFIVLEPDGSPLS--PDRHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEV 798
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + G+++ A +ST + ++F + +
Sbjct: 799 NFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSE 858
Query: 376 GNPADPKIIEAVRQKI 391
D ++ +A++Q++
Sbjct: 859 RQALDEEMRKALQQRL 874
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H P+V V A R + + + DR L V L V A I T+ +
Sbjct: 681 LLVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQR-VIQCLEAAVG---------RRASEGVR-------- 327
++ F + DG+P+S P+R +IQ LE A+ RR S +R
Sbjct: 741 MAMDTFIVLEPDGSPLS--PDRHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEV 798
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + G+++ A +ST + ++F + +
Sbjct: 799 NFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSE 858
Query: 376 GNPADPKIIEAVRQKI 391
D ++ +A++Q++
Sbjct: 859 RQALDEEMRKALQQRL 874
>gi|262375426|ref|ZP_06068659.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
gi|262309680|gb|EEY90810.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
Length = 890
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 36/190 (18%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQ----CKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P V A R Y+ VQ +D+ L V L M V A I T
Sbjct: 675 ILQHG-DNPAPLVLMRAHRKYAQDAVQIFIYTQDQPNLFATTVAILDRMNLDVQDARIIT 733
Query: 283 AGERAYLEFYIRHIDGTPISSEPERQ-RVIQCLEAAVG----------RRASEGVR---- 327
A + L+ Y+ + ++PER+ VI+ L+ A+ RR +R
Sbjct: 734 ATKAFSLDTYVVLDRFGTLLTDPEREATVIEALKDALSHSDEYPGLMQRRIPRQLRHFDI 793
Query: 328 ----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
+E+ D GLLA + F GL++ A+++T + A +IF+V
Sbjct: 794 ENTVEISVNPALNQNMVEIATLDHPGLLAKIGGLFMMQGLDIHSAKIATLGERAEDIFFV 853
Query: 372 TDEMGNPADP 381
T + GNP P
Sbjct: 854 TKKDGNPMTP 863
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ G+L E +++DL+L I A+I++ +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G D GLLSE+ +++DL + A + T + ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPVRVKKIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P +
Sbjct: 877 LQDAI-VQQLSVTQEPGV 893
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 39/244 (15%)
Query: 77 DVFHVT------DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------LTALELTG 123
D+FHV D ++ TD + + ++Q ++T G+S S G T + L
Sbjct: 684 DLFHVLVKRLPDDYWFSERTD-VIAANMQQIIDTDSKGQSISVTGHEMPAYDATMISLYA 742
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G + + ++++A++ T +A + + G I+ + ++R+
Sbjct: 743 IDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQA 802
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQ 240
+ + + IRS+ ++ R P+ + P+V +
Sbjct: 803 IEDA--ATSHIRSSNKLAAL--------------------RPPLFWRGKAFHVEPLVFID 840
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N A ++V+ V +DR LL D+ C L + + A I T GERA FY+ +
Sbjct: 841 NQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVSDLFSHK 900
Query: 301 ISSE 304
I+++
Sbjct: 901 ITNQ 904
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I D P+ S+PE R +Q
Sbjct: 859 FITDADNQPL-SDPELCRRLQ 878
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P +
Sbjct: 877 LQDAI-VEQLSVTQEPGV 893
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H P+V V A R + + + DR L V L V A I T+ +
Sbjct: 681 LLVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQR-VIQCLEAAVG---------RRASEGVR-------- 327
++ F + DG+P+S P+R +IQ LE A+ RR S +R
Sbjct: 741 MAMDTFIVLEPDGSPLS--PDRHPMIIQALEQAITQSQWVPPRTRRPSAKLRHFSVDTEV 798
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + G+++ A +ST + ++F + +
Sbjct: 799 NFLPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSE 858
Query: 376 GNPADPKIIEAVRQKI 391
D ++ +A++Q++
Sbjct: 859 RQALDEEMRKALQQRL 874
>gi|126724979|ref|ZP_01740822.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2150]
gi|126706143|gb|EBA05233.1| PII uridylyl-transferase [Rhodobacteraceae bacterium HTCC2150]
Length = 920
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +VV+AK +T +G + ++ +++D + G P D + R+
Sbjct: 739 DHPGIFSRMAGALALAGANVVDAKSYTTKDGLVTAVFWIQD-HDGKPY-DETRYKRMTQM 796
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV---VTVQ 240
+ +KG+ R A DRD + + D+ V +T
Sbjct: 797 IDKTMKGEVVARDA-------------------LVDRD----KIKKREKDFRVPTTITFD 833
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP 300
N Y+++ V +DRT LL D+ TL + + A I T G + FY++ + G
Sbjct: 834 NEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVKDMFGLK 893
Query: 301 ISSEPERQRVIQ 312
+E +QR ++
Sbjct: 894 FHNEG-KQRTLE 904
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 830 ITFDNEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVKDM 889
Query: 85 NGNKLTDESVISYIEQSL 102
G K +E +E+ L
Sbjct: 890 FGLKFHNEGKQRTLEKRL 907
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + +SG +ED +
Sbjct: 96 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 155
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N + + SA++ + A + Q+ D E + S D P
Sbjct: 156 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPK-EQV-----DVEIATQITISDDGP- 208
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
S++ V+ DR LL D+V T+TD+ V +T G A +F++ +
Sbjct: 209 ---------KRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVNYK 259
Query: 297 D 297
D
Sbjct: 260 D 260
>gi|255021561|ref|ZP_05293604.1| [Protein-PII] uridylyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254968949|gb|EET26468.1| [Protein-PII] uridylyltransferase [Acidithiobacillus caldus ATCC
51756]
Length = 819
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGR-IASLIYVKDCNSGSPIEDSQQIDRI 180
G D+ GL E+ A L ++++A++ T H+GR + + + + + +S + +Q+I R
Sbjct: 636 GPDKAGLFEEITATLDRHSLNILDARIDTSHDGRALDTFVVLDESHSYARPAAAQEILRR 695
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+ LR VL G+ + H R L FAD E + V
Sbjct: 696 D--LRAVLHGE-----VPRKPHFGMRH--RDLRHRYFADLPLE-------------IFVD 733
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
N +++ ++ DR LL+ V TL + + +F A ++T GE F+IR
Sbjct: 734 NHTLAEDTLLEIRAPDRLGLLYRVGGTLRTLGFTIFGAKVSTFGESVEDTFFIR 787
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 90 TDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
T+ V + +++L I S+ F G T + + D + + V LA ++ +A+V
Sbjct: 683 TEAIVTNPSDENLVLIRETTSHEFEGATQIFVRVKDAPHVFTAVANALAQQNLNIQDARV 742
Query: 150 WTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK---GDNDIRSAKMTVSMAV 205
++ NG A YV D N +D + ++I + L+ G D+ S +
Sbjct: 743 YSAANGYTADTFYVLDDNFQPIGDDPARSEKIRESVLEELRLVSGYRDVVSRR------- 795
Query: 206 THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
T R+L Q R Y + N ++V+ V DR LL +
Sbjct: 796 --TPRQLKQFAVPTRTY----------------ISNDIVSGHTVLEVISPDRPGLLATIG 837
Query: 266 CTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
DM+ + +A I+T GER F+I I+G P+S
Sbjct: 838 RVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLS 874
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R I N + T+++V S R G+L +V D+++ ++ A IS+ G D+F ++D
Sbjct: 808 RTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISD 867
Query: 84 LNGNKLTDESVISYIEQSL 102
+ GN L+D ++ + +++ +
Sbjct: 868 IEGNPLSDPNLCAELQKEI 886
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F + + + A++ST + +IF+++D GNP +DP +
Sbjct: 822 LEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLSDPNLCAE 881
Query: 387 VRQKI 391
++++I
Sbjct: 882 LQKEI 886
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 58 DLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD---------ESVISYI---------- 98
+LN+ + Y +++G + D F+V D N + D ESV+ +
Sbjct: 734 NLNIQDARVYSAANG-YTADTFYVLDDNFQPIGDDPARSEKIRESVLEELRLVSGYRDVV 792
Query: 99 ---------EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
+ ++ T Y ++ +G T LE+ DR GLL+ + V D+ + AK+
Sbjct: 793 SRRTPRQLKQFAVPTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKI 852
Query: 150 WTHNGRIASLIYVKDCNSGSPIED 173
T R+ + ++ D G+P+ D
Sbjct: 853 STLGERVEDIFFISDI-EGNPLSD 875
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 894 DLLAHKITNQNRLKAIEKRL 913
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LL D+ C L + + A I T GERA FY+
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ I+++ + + + L AA R S+
Sbjct: 894 DLLAHKITNQNRLKAIEKRLLAAAERANSK 923
>gi|115480793|ref|NP_001063990.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|52076090|dbj|BAD46603.1| unknown protein [Oryza sativa Japonica Group]
gi|113632223|dbj|BAF25904.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|215700991|dbj|BAG92415.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 32/305 (10%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT---DE 92
T+V + + G+ + +++ L I K +S+DGR+ V V G + D
Sbjct: 23 TVVTISCPDKTGLGCDLCRLVLLFGLNIVKGDMSTDGRWCYIVLWVVARPGRAMAMRWDL 82
Query: 93 SVISYIEQSLETIHYGRSNSFNGLTALELTGTD-----------------RVGLLSEVFA 135
I+ +G N L L D R+GLL +V
Sbjct: 83 LKDRLIQLCPVAAPFGLDNHHLAAAGLHLHDHDAPAPSPNIFLLKFFCYDRMGLLHDVTR 142
Query: 136 VLADLQCSVVEAKV-WTHNGRIASLIYVKDCNS--GSPIEDSQQIDRIEARLRNVLKGDN 192
VL +L+ ++ KV T +GR+ L ++ D + + D++++ L + L
Sbjct: 143 VLCELELTIRRVKVSTTPDGRVLDLFFITDARELLHTKSRREETYDKLQSVLGDSLTS-C 201
Query: 193 DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNV 252
+I SA +S + + H + + E + S V + N +++++ +
Sbjct: 202 EIESATEEMSSCLQASTLLPHSAVEEMFNVEVVEEQSRSCGGLSVAMDNSLSPAHTLIQI 261
Query: 253 QCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
QC D L++D++ TL D + Y F+A+ N + E ++ + DG I + +Q
Sbjct: 262 QCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCE---VDLFAVQSDGKKIVDQ-HKQ 317
Query: 309 RVIQC 313
R + C
Sbjct: 318 RALCC 322
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 26/151 (17%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE- 306
+VV + C D+T L D+ + + ++T G Y+ ++ G ++ +
Sbjct: 23 TVVTISCPDKTGLGCDLCRLVLLFGLNIVKGDMSTDGRWCYIVLWVVARPGRAMAMRWDL 82
Query: 307 -RQRVIQCLEAAVG------RRASEGVRLE----------------LCMEDRQGLLADVT 343
+ R+IQ A A+ G+ L C DR GLL DVT
Sbjct: 83 LKDRLIQLCPVAAPFGLDNHHLAAAGLHLHDHDAPAPSPNIFLLKFFCY-DRMGLLHDVT 141
Query: 344 RTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
R E L + R +VST D L++F++TD
Sbjct: 142 RVLCELELTIRRVKVSTTPDGRVLDLFFITD 172
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + LA + +VV+A+ +T +G + +++D + G+P D ++ R+
Sbjct: 743 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDAD-GNPY-DVSRLPRLRK 800
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G+ V TE M D+ +R + T +T N
Sbjct: 801 MIERTLMGE-------------VVTTE----AMKSRDKVKKRERAFKVPTH---ITFDNE 840
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
Y+++ V +DR LL D+ TL + + +A I T GE+ FY++ + G
Sbjct: 841 GSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFGLKYY 900
Query: 303 SEPERQRVIQCLEAAV 318
S +++ + + L A+
Sbjct: 901 SASKQRTLERRLRTAI 916
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 835 ITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDM 894
Query: 85 NGNKLTDESVISYIEQSLET 104
G K S +E+ L T
Sbjct: 895 FGLKYYSASKQRTLERRLRT 914
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N + T+++V R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 85 NGNKLTD 91
G K+ +
Sbjct: 903 TGQKIAN 909
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAV 136
++ H D NG +L+ + +F G+T L + D LLS +
Sbjct: 718 ELLHKADKNGEQLSFDVT---------------PRAFEGVTELTILAQDHPRLLSVIAGA 762
Query: 137 LADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIR 195
++V+A++ T +G I++ G ++ ++ +RI A + L+GD I
Sbjct: 763 CYSTGANIVDAQIDTTTDGFALDTIFIGRELPGDD-DERRRGERITALIERTLRGDEQIP 821
Query: 196 SAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCK 255
+A + R RM + +++ V + N Y+V+ V
Sbjct: 822 E-----PVAKKGSVR------------GRMKAFKVASE---VLLNNTLSDDYTVLEVSGL 861
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLE 315
DR LL+D+ ++ + + A I+T GE+ FY+ + G I++ ++ + + L
Sbjct: 862 DRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQKIANIGRQEIIRERLS 921
Query: 316 AAV 318
AAV
Sbjct: 922 AAV 924
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LE+ DR GLL D+TR+ LN+ A +ST ++ +++FYVTD G KI
Sbjct: 856 LEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQ----KIANIG 911
Query: 388 RQKI 391
RQ+I
Sbjct: 912 RQEI 915
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 92 ESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
E + I +S +++ G S F + D L S + L ++++A++ T
Sbjct: 684 EDPLVLIRESSQSVLAGGSQIF-------IYTPDTRNLFSATVNAIDSLGLTIMDARIIT 736
Query: 152 HNGRIASLIYVKDCNSGSPI-EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTER 210
+ Y+ G+PI ED +I++I L LK + S TVS
Sbjct: 737 SVDGFSLDTYIVLDEQGTPIGEDWARIEQIRKTLTETLKYPDRYAS---TVS-------- 785
Query: 211 RLHQMMFADRDYERMPVLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
RMP D P V + N + V++Q DR LL +
Sbjct: 786 ------------RRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFM 833
Query: 270 DMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLE 315
E +V +A I T GERA F+I +DG P+S Q + Q L+
Sbjct: 834 RFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLK 879
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T V + + R G+L ++ +L++ A I++ G DVF +TD
Sbjct: 800 QVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITD 859
Query: 84 LNGNKLTDESVISYIEQSLE 103
L+G ++D ++ ++Q+L+
Sbjct: 860 LDGEPVSDPTLCQELQQTLK 879
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLLA + R F + V A ++T + A ++F++TD G P +DP + + ++Q +
Sbjct: 820 DRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTL 878
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
A+E LEL DR GLLA V R F E + ++ A+++T + ++F++T + G P D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 381 PKIIEAVRQKI 391
P+ + +R+++
Sbjct: 875 PERQQQLRERL 885
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + ++ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ +DN TL++V + R GIL + V +N+ ++ A IS+ G DVFHV
Sbjct: 759 RISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGESVFDVFHVEG 818
Query: 84 LNGNKLTDE----SVISYIEQSL 102
G ++ D +IS +E SL
Sbjct: 819 PEGGRIEDHIHLRELISALEYSL 841
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 157 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 216
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 217 DN------PARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFA------------- 257
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 258 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 314
Query: 292 YIRHIDGTPISSEPE 306
+I D P+ S+PE
Sbjct: 315 FITDADNQPL-SDPE 328
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADP----K 382
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 273 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCLR 332
Query: 383 IIEAVRQKIGLSNLKVKEL 401
+ EA+ Q++ ++ EL
Sbjct: 333 LQEAIVQQLSVTQEPGVEL 351
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I TA + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITAQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|302833812|ref|XP_002948469.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
gi|300266156|gb|EFJ50344.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
Length = 199
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 45/179 (25%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N D +V+ V+ ++T L D + L ++ + A +NT G FYI
Sbjct: 3 PTVKIDNIRDPFATVLTVEYGEKTGELLDAITALKNLGLNIRRAKVNTGGT----TFYIT 58
Query: 295 HIDGTP--ISS---EPERQRVIQCLEA---------AVGRRASE-------GVR------ 327
D + + S E R V+ L A +VG ++++ G R
Sbjct: 59 DADTSEKIVKSARLEDIRMTVLNSLVAKFPEVGEALSVGAKSNDLDGNKVLGTRRKVVQT 118
Query: 328 --------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVT 372
L++ DR GLL D+ R ++ LNV AE+ TE A + F++T
Sbjct: 119 TIDIVEASNGSCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLAKDEFFIT 177
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T L + ++ G L + L +L ++ AKV T + Y+ D ++ I S +
Sbjct: 16 TVLTVEYGEKTGELLDAITALKNLGLNIRRAKVNTG----GTTFYITDADTSEKIVKSAR 71
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + ++ +++V D D ++ R
Sbjct: 72 LEDIRMTVLNSLVA----KFPEVGEALSVGAKSN--------DLDGNKVLGTRRKVVQTT 119
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
+ + ++ S SV+ + DR LL D+V L D+ V A I+T G A EF+I +
Sbjct: 120 IDIVEASNGSCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLAKDEFFITY- 178
Query: 297 DGTPISS 303
G P+++
Sbjct: 179 HGEPLTT 185
>gi|374620392|ref|ZP_09692926.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
gi|374303619|gb|EHQ57803.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
Length = 869
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 32/166 (19%)
Query: 258 TKLLFDVVCT-LTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQ--C 313
T+ +F VC+ L ++ + A I + + A L+ F++ DG+PI S PE +I+
Sbjct: 694 TENVFSKVCSALELLDLSINDARIYSGTDGATLDTFFVLKADGSPIDSAPETLTLIERSI 753
Query: 314 LEAAVGRRASEGVR---------------------------LELCMEDRQGLLADVTRTF 346
+EA S+G + +EL DR GLLA V +
Sbjct: 754 VEALSASSVSQGNQRMNRTLRSFLSPTEVTFIEDQNRNLTIMELSSPDRPGLLARVGQIM 813
Query: 347 RENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+N +++ A++ T + ++F++T + G+ AD I E +R+++
Sbjct: 814 ADNQISIQGAKIQTLGERVEDVFFLTTDQGDRLADDTICERLREQV 859
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S++F T LE+T +G L + A L +L + +V S YV D ++G
Sbjct: 282 KSDAF--ATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVLDRDTG 339
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
+ S++++ +IR +T +M H E A+ + P
Sbjct: 340 EKVTKSERLE--------------EIRQTVLT-NMLAFHPE-------SAEFIQAKAPTR 377
Query: 229 RHSTDYPVVTVQNW--------ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
+ D P+ V++ A++ ++ ++++ DR LL DVV TL D+ V A +
Sbjct: 378 AGANDSPLGKVRSTVETGIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEV 437
Query: 281 NTAGERAYLEFYIRHIDGTPISSEPERQRVIQCL 314
+T G +A YI H G P+S E Q V+ L
Sbjct: 438 DTIGNKAKDIIYITH-RGGPLSPAME-QLVVNSL 469
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+L++ DR GLL DV RT ++ L V AEV T ++A +I Y+T G P P + +
Sbjct: 405 TKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYIT-HRGGPLSPAMEQ 463
Query: 386 AV 387
V
Sbjct: 464 LV 465
>gi|332296440|ref|YP_004438363.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
gi|332179543|gb|AEE15232.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
Length = 849
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 29 NAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS-DGRFFMDVFHVTDLNGN 87
N + P +T++++ + RHG+L Q L+ L L I+ A IS+ +GR D F++T N
Sbjct: 773 NNISPKSTVIEIIAEDRHGLLYRLTQTLSSLGLYIQTAKISTWEGR-AEDAFYITKENNL 831
Query: 88 KLTDESVISYIEQ 100
KL+D+ Y+++
Sbjct: 832 KLSDQECQEYLKK 844
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
+E+ EDR GLL +T+T GL + A++ST A + FY+T E
Sbjct: 782 IEIIAEDRHGLLYRLTQTLSSLGLYIQTAKISTWEGRAEDAFYITKE 828
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 34/167 (20%)
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER--Q 308
+ KDR L D+ ++ + V A + T+ + L+ F+++ + G + E R +
Sbjct: 741 IAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAALGCENPRVLR 800
Query: 309 RVIQCLEAAV--------GRRASEGVR----------------------LELCMEDRQGL 338
R+ LEAA RR E R +E DR GL
Sbjct: 801 RLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEASGRDRPGL 860
Query: 339 LADVTRTFRENGLNVTRAEVSTERDEALNIFYV-TDEMGNPADPKII 384
L + RT +NGL++ A + + A++ FYV T E G AD K +
Sbjct: 861 LQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGGKVADAKKV 907
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VVIDN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 834 APTVVIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYV 893
Query: 82 TDLNGNKLTDESVIS 96
G K+ D ++
Sbjct: 894 QTSEGGKVADAKKVT 908
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 31 VCPTATLVKVDSARRHGILLEAVQVLTDL--NLLIKKAYISSDGRFFMDVFHVTDLNGNK 88
V A + + + R G+ + ++ L N++ + + S G+ +DVFHV D+ G
Sbjct: 732 VGANAAEIVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQA-LDVFHVQDVTGAA 790
Query: 89 LTDES--VISYIEQSLETIHYG--------------RSNSF-------------NGLTAL 119
L E+ V+ + +LE G R+ +F N T +
Sbjct: 791 LGCENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVV 850
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
E +G DR GLL + LAD S+ A + + R YV+ + G + D++++
Sbjct: 851 EASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ-TSEGGKVADAKKV 907
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 42/203 (20%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+V ++ R + + + + D+ V + + + A I T+ + L+
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 292 YI-RHIDGTPISSEPER-----QRVIQCLEAA------VGRRASEGVR------------ 327
YI +DG+PI + PER + +I L + RR ++
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP- 378
LE+ DR GLLA V + F + L+V A+++T + ++F+VTD P
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHNQPL 868
Query: 379 ADPKIIEAVRQKIGLSNLKVKEL 401
+DP+ ++Q + VKEL
Sbjct: 869 SDPQFCLRLQQAL------VKEL 885
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDVDGSPIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I+ I L L+ +D + +RR+ + L+H
Sbjct: 761 NNPERIEEIRRGLITALRNPDDY----------LNIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N R +++ + DR LL V D + V +A I T GER F
Sbjct: 799 AFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQCL 314
++ P+S R+ Q L
Sbjct: 859 FVTDAHNQPLSDPQFCLRLQQAL 881
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DAHNQPLSDPQFCLRLQQAL 881
>gi|399544195|ref|YP_006557503.1| [protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
gi|399159527|gb|AFP30090.1| [Protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
Length = 881
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 222 YERMPVLRHSTDY-PVVTVQN---WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
++ ++RH D P+V +++ YS + + K+RT L + +
Sbjct: 667 WQTAAIIRHGDDADPLVLIRDTRGGPTDGYSQIIIYMKNRTASFAATTAVLEQLNLNIVD 726
Query: 278 ATINTA-GERAYLEFYIRHIDGTPISSEPERQ-----RVIQCLEAA------VGRRASEG 325
A I+++ G + + + G P+ +P+R+ R+I+ L+ + RR
Sbjct: 727 ARISSSDGPWSISSYVVLDDHGQPLGIDPDRKERVRSRLIEELDDPEDYPDIIHRRTPRQ 786
Query: 326 VR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEA 365
++ LE+ DR GLLA + + E+ + +T A+++T +
Sbjct: 787 LKHFAFPTEVLLSNDSFNLRTVLEVITPDRPGLLARIGQVLLEHKVRLTTAKIATLGERV 846
Query: 366 LNIFYVTDEMGNP-ADPKIIEAVRQKI 391
++F+VTDE GN DP +A++ +
Sbjct: 847 EDVFFVTDENGNALCDPAACQALQDDL 873
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V++ N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVLLSNDSFNLRTVLEVITPDRPGLLARIGQVLLEHKVRLTTA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD NGN L D + ++ L
Sbjct: 838 KIATLGERVEDVFFVTDENGNALCDPAACQALQDDL 873
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E + + A++ T + ++F++TD P DP++ EA
Sbjct: 806 LEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITDAKQQPITDPELCEA 865
Query: 387 VRQKI 391
++Q I
Sbjct: 866 IQQAI 870
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
L S + A L L S+ +A+++ N G +V + S EDS +I+ I L
Sbjct: 706 LFSRICAQLEQLDLSIHDARIYNANDGMTLDTFFVLGSDGKSIAEDSTRINHIREHL--- 762
Query: 188 LKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD-RS 246
+++++ T R + Q R P + S P T + ++
Sbjct: 763 ------------SLTLSDTDNARDIVQ--------RRTPRAKKSFSVPTETAMAVDEVKN 802
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
YSV+ + DR LL + + + + A I T GER F+I PI ++PE
Sbjct: 803 YSVLEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITDAKQQPI-TDPE 861
Query: 307 RQRVIQ 312
IQ
Sbjct: 862 LCEAIQ 867
>gi|356546627|ref|XP_003541726.1| PREDICTED: glycogen phosphorylase 1-like [Glycine max]
Length = 983
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
+DN+ +T + + + G+L +V L L + +A + +G FF+ F VTD +G
Sbjct: 63 VDNSDSADSTAFVIRARNQIGLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSHG 122
Query: 87 NKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDR 126
NK+ D + I+++L G + NG ++ + +R
Sbjct: 123 NKIEDSDSLQRIKRALAEAIAGEDDGGNGTISVTRSAANR 162
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 337 GLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
GLL +TR F+ GL V RA V E D + F+VTD GN
Sbjct: 83 GLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSHGN 123
>gi|410465082|ref|ZP_11318452.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981801|gb|EKO38320.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 884
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VT+ N A ++V++V C DR LL+D+ TL +M A + T R FY+R
Sbjct: 793 PEVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVR 852
Query: 295 HIDGTPISSEPERQRVIQC 313
G + +PE+ I+
Sbjct: 853 GTAGRRV-EDPEQLAEIKA 870
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G+ F+ + + G SV TI S+ F T ++++ DRVGLL
Sbjct: 765 GKLFL-AYRLAQKRGGFAASASVAGPKSPPEVTIDNKASDLF---TVIDVSCDDRVGLLY 820
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
++ LA++ AKV T GR+ + YV+ +G +ED +Q+ I+A L + L D
Sbjct: 821 DIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG-TAGRRVEDPEQLAEIKAALLHRLADD 879
>gi|340782435|ref|YP_004749042.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
gi|340556587|gb|AEK58341.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
Length = 825
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGR-IASLIYVKDCNSGSPIEDSQQIDRI 180
G D+ GL E+ A L +++ A++ T H+GR + + + + + +S + +Q+I R
Sbjct: 642 GPDKAGLFEEITATLDRHSLNILNARIDTSHDGRALDTFVVLDESHSYARPAAAQEILRR 701
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+ LR VL G+ + H R L FAD E + V
Sbjct: 702 D--LRAVLHGE-----VPRKPHFGMRH--RDLRHRYFADLPLE-------------IFVD 739
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
N +++ ++ DR LL+ V TL + + +F A ++T GE F+IR
Sbjct: 740 NHTLAEDTLLEIRAPDRLGLLYRVGGTLRTLGFTIFGAKVSTFGESVEDTFFIR 793
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGDNP 763
Query: 92 -------ESVISYIEQSLE----------------------TIHYGRSNSFNGLTALELT 122
E +I ++ E TIH +++ +T LELT
Sbjct: 764 ARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTILELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + +V D N+ P+ D + R++
Sbjct: 821 APDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANN-QPLSDPELCARLQ 878
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 37/202 (18%)
Query: 227 VLRHSTDY-PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H D P+V ++ R + + + + D+ V ++ + + A I T
Sbjct: 680 ILQHPADSGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPERQRVIQ--CLEA---------AVGRRASEGVR--- 327
+ + L+ Y+ DG I P R + I+ +EA + RR ++
Sbjct: 740 STSQFTLDTYVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LEL DR GLLA + R F E L++ A+++T + ++F+
Sbjct: 800 FAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
VTD P +DP++ +++ I
Sbjct: 860 VTDANNQPLSDPELCARLQETI 881
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 11 DEYEKLVIR---------MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
DEY ++ R P+V I N T++++ + R G+L ++ + +L
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
++ A I++ G DVF VTD N L+D + + +++++
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQETI 881
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + +SG +ED +
Sbjct: 97 TVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 156
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTD 233
++ I + N + + SA++ + A VT E+ D E + S D
Sbjct: 157 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQ---------VDVEIATHITISDD 207
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
P S++ V+ DR LL D+V +TD+ V +T G A +F++
Sbjct: 208 GP----------KRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHV 257
Query: 294 RHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ D I +P +Q ++ L + R +E
Sbjct: 258 NYKDKALI--KPLQQVLVNSLRYFLRRPETE 286
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 130/299 (43%), Gaps = 32/299 (10%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK------ 88
++ V+ + G+ + +++ L I + +S+DG++ VF V + +
Sbjct: 20 PAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGLLKK 79
Query: 89 --------LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ S ISY L+ + L+L DR GLL +V VL +L
Sbjct: 80 RLVGACPSCSSASGISYYTAELQ------PPRPPDVFLLKLACHDRKGLLHDVTGVLCEL 133
Query: 141 QCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLRN-VLKGDNDI 194
+ ++ + KV T +GR+ L +V D ++ ED+ D + A + N ++ D ++
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTRELLHTNKRKEDTY--DHLRAVMGNSMISCDIEM 191
Query: 195 RSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
++T A + + + + + + +P ST V+ + N ++++V +
Sbjct: 192 VGPEITACSAESSFLPTAITENILPLQMPDELPSSLTSTSVSVI-MDNLLSPAHTLVQIV 250
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY-LEFYIRHIDGTPISSEPERQRVI 311
C+D LL+D++ TL D + + R ++ +I DG I +P +Q+ +
Sbjct: 251 CQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLFIMQADGKKI-VDPNKQKAL 308
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 32/221 (14%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
+ C L + + A I T GERA FY+ + I+++
Sbjct: 864 LGCALFNARLTISSAHIATYGERAVDVFYVSDLFSHKITNQ 904
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 32/221 (14%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
+ C L + + A I T GERA FY+ + I+++
Sbjct: 864 LGCALFNARLTISSAHIATYGERAVDVFYVSDLFSHKITNQ 904
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER------QRVIQCLEAAVGRRASEG 325
RH DG P + R ++ L + ++ +
Sbjct: 739 LDQHGKAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSKKR 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA V TF E G+N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGGRLSEEQEQ 858
Query: 386 AVRQKI 391
A+R+++
Sbjct: 859 ALRERL 864
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE 306
+I D P+ S+PE
Sbjct: 859 FITDADNQPL-SDPE 872
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADP----K 382
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCLR 876
Query: 383 IIEAVRQKIGLSN 395
+ EA+ Q++ ++
Sbjct: 877 LQEAIVQQLSVTQ 889
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 32/221 (14%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPPYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
+ C L + + A I T GERA FY+ + I+++
Sbjct: 864 LGCALFNARLTISSAHIATYGERAVDVFYVSDLFSHKITNQ 904
>gi|359483492|ref|XP_002273615.2| PREDICTED: glycogen phosphorylase 1-like [Vitis vinifera]
Length = 981
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V +D AV +T + + + G+L +V L L I KA + +G FF F V
Sbjct: 64 TPTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQKFFV 123
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD +G K+ D+ + I ++L
Sbjct: 124 TDSHGRKIEDQENLDRITKAL 144
>gi|357392074|ref|YP_004906915.1| putative protein-P-II uridylyltransferase family protein
[Kitasatospora setae KM-6054]
gi|311898551|dbj|BAJ30959.1| putative protein-P-II uridylyltransferase family protein
[Kitasatospora setae KM-6054]
Length = 810
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
L L DR GLL V VLA + +V +A + + A + + + D +
Sbjct: 627 LTLAIPDRPGLLGTVAGVLAVHRLAVRKAGLRELDPVGAGPVLLLSWTVAAEYGDLPEAA 686
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH-STDYPVV 237
R+ A LR L G D+ RRL A+RD P R ST PVV
Sbjct: 687 RLRADLRRALDGSLDV--------------TRRL-----AERDAA-APRRRGISTPPPVV 726
Query: 238 TVQNW-ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
TV A RS +V+ V+ D LL + L V A ++T G A FY+
Sbjct: 727 TVAPHDASRSATVLEVRAHDAPGLLHRIGRALDAAGVRVRTAHVSTLGAEAVDAFYLTSP 786
Query: 297 DGTPISSE 304
DG P++++
Sbjct: 787 DGRPLAAD 794
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 24/195 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y V D + S
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPARVKKIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPE 306
+I D P+ S+PE
Sbjct: 859 FITDADNQPL-SDPE 872
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCLR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P +
Sbjct: 877 LQAAI-VEQLSVSQEPGV 893
>gi|225849566|ref|YP_002729800.1| (Protein-PII) uridylyltransferase [Persephonella marina EX-H1]
gi|225645832|gb|ACO04018.1| putative (Protein-PII) uridylyltransferase [Persephonella marina
EX-H1]
Length = 866
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +DN T+ V R G+L + +V T NL + A + + G D F+V
Sbjct: 780 VKVDNETSDIYTIFDVSGEDRIGLLFDIFRVFTRFNLFVHIAKVVTQGERIRDAFYVRTF 839
Query: 85 NGNKLTDESVISYIEQSL 102
+ KLTDE +I +++ L
Sbjct: 840 DKEKLTDELIIKEVKEEL 857
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V V N Y++ +V +DR LLFD+ T V A + T GER FY+R
Sbjct: 780 VKVDNETSDIYTIFDVSGEDRIGLLFDIFRVFTRFNLFVHIAKVVTQGERIRDAFYVRTF 839
Query: 297 DGTPISSE 304
D ++ E
Sbjct: 840 DKEKLTDE 847
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 40/196 (20%)
Query: 213 HQMMFADRDYERMPVL--RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD 270
H AD + P++ RH D PV + + V +D+ +LL + L
Sbjct: 226 HTEAIADHENIEAPLVLVRHPLDSPVANT--------TQIFVHAQDKPELLVRICIELEL 277
Query: 271 MEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQRVIQC-LEAAVG--------R 320
+ + A I T + A L FY+ + DG+PI+S+ I+ +E + R
Sbjct: 278 LHLSIHDARIYTGTDGATLNTFYVLNSDGSPIASDEANLDYIRSSIETGLASNKSRSSTR 337
Query: 321 RASEGVR--------------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
R ++ LE+ DR GLLA + F ++G+ + A++ T
Sbjct: 338 RTPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQT 397
Query: 361 ERDEALNIFYVTDEMG 376
+ ++F+VTD G
Sbjct: 398 LGERVEDVFFVTDMQG 413
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 2 KDMEWPA-CLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
+D+ W + ++E + + R +D+ V T T + V + + +L+ L L+
Sbjct: 221 EDIAWHTEAIADHENIEAPLVLVRHPLDSPVANT-TQIFVHAQDKPELLVRICIELELLH 279
Query: 61 LLIKKA--YISSDGRFFMDVFHVTDLNGNKL-TDESVISYIEQSLET---IHYGRSN--- 111
L I A Y +DG ++ F+V + +G+ + +DE+ + YI S+ET + RS+
Sbjct: 280 LSIHDARIYTGTDGAT-LNTFYVLNSDGSPIASDEANLDYIRSSIETGLASNKSRSSTRR 338
Query: 112 ------SF-------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
SF G T LE+ DR GLL+ + A+ D ++ AK+ T
Sbjct: 339 TPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQTL 398
Query: 153 NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
R+ + +V D G + ++ ++ ++ +R L G+
Sbjct: 399 GERVEDVFFVTDMQ-GRALTNNTTLEHLQTAIRETLDGE 436
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 32/220 (14%)
Query: 98 IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
I +S +++ G S F + D L S L L ++++A++ T +
Sbjct: 690 IRESSQSVLAGGSQIF-------IYTPDTRNLFSATVNALDSLGLTIMDARIITSVDGFS 742
Query: 158 SLIYVKDCNSGSPI-EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
Y+ G+PI ED +I++I L LK + R A TVS
Sbjct: 743 LDTYIVLDEHGTPIGEDWARIEQIRKTLTETLKYPD--RYAT-TVS-------------- 785
Query: 217 FADRDYERMPVLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
RMP D P V + N + V++Q DR LL + E +V
Sbjct: 786 ------RRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILV 839
Query: 276 FHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLE 315
+A I T GERA F+I +DG P+S Q + Q L+
Sbjct: 840 QNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLK 879
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T V + + R G+L ++ +L++ A I++ G DVF +TD
Sbjct: 800 QVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITD 859
Query: 84 LNGNKLTDESVISYIEQSLE 103
L+G ++D ++ ++Q+L+
Sbjct: 860 LDGEPVSDPTLCQELQQTLK 879
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
DR GLLA + R F + V A ++T + A ++F++TD G P +DP + + ++Q +
Sbjct: 820 DRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTL 878
>gi|393770938|ref|ZP_10359414.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
gi|392723594|gb|EIZ80983.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
Length = 924
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A+I++ G D F+VT
Sbjct: 831 PRVLFDNKGSNRFTVVEVNARDRPALLNRLAHALFESRLMVHSAHIATYGERAADTFYVT 890
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA 118
DL G K+ + + +E+ L + N+ G+ A
Sbjct: 891 DLFGEKVIGTARLKALERRL--LDAASENTVEGVAA 924
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 22/191 (11%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSP 170
S G T + + +D GL + + ++++A++ T NGR V+D G P
Sbjct: 728 SARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRNGRAVDNFLVQDP-LGRP 786
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q+ R+ + N L I + V + R F R
Sbjct: 787 FMEASQLARLATSIENALANRVHI------LPQLVARPDARPRADAFEVR---------- 830
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V N ++VV V +DR LL + L + +V A I T GERA
Sbjct: 831 ----PRVLFDNKGSNRFTVVEVNARDRPALLNRLAHALFESRLMVHSAHIATYGERAADT 886
Query: 291 FYIRHIDGTPI 301
FY+ + G +
Sbjct: 887 FYVTDLFGEKV 897
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPERQ 308
V V DR + VV L + + A + ++ L+ FY+ G P+ EP R
Sbjct: 722 VFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEPHRL 781
Query: 309 -----------RVIQCLEAAVGRRASEGVR--------------------LELCMEDRQG 337
++++ + RR ++ LE+ DR G
Sbjct: 782 EQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSADRPG 841
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
LLA + R F + L + A++ST + +IF++TD P AD +IE ++Q I
Sbjct: 842 LLARIARIFISHDLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 10 LDEYEKLVIRMNTPRVV----------IDNAVCPTATLVKVDSARRHGILLEAVQVLTDL 59
+++Y K VI+ TPR + I T + +++ SA R G+L ++
Sbjct: 795 VEDYSK-VIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSADRPGLLARIARIFISH 853
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+L + A IS+ G D+FH+TD L D ++I ++Q++
Sbjct: 854 DLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVIDN T+V+V A L Q L D L I +A I+++ +DVF+V
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 84 LNGNKLTDESVISYIEQSL 102
G+KLTD + + +L
Sbjct: 828 QAGDKLTDVEAMDKVRLTL 846
>gi|152965363|ref|YP_001361147.1| PII uridylyl-transferase [Kineococcus radiotolerans SRS30216]
gi|151359880|gb|ABS02883.1| metal dependent phosphohydrolase [Kineococcus radiotolerans
SRS30216]
Length = 778
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
+ VV V DRT + D+ L ++V A + T A +++ G P S+
Sbjct: 593 GFFVVTVVTPDRTGVFADLAGLLAGHRFLVRSALVRTLDGVAVDSWWVESPSGEPPSAVL 652
Query: 306 ERQRV-------IQCLEAAVGR-----RASEGVR--------------------LELCME 333
RQ + + LE R R + GVR LE+
Sbjct: 653 LRQGLERIVGGDVALLERLAARDAQTPRPAGGVRSLVAHPRIVILPGASERATVLEVRAA 712
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVR 388
DR GLL + R E G+++ A V+T +A+++ Y+ + G + P++ A+R
Sbjct: 713 DRPGLLHALGRALAEEGIDIRSAHVATYAAQAVDVLYLAEASGERLSPPRVAVAIR 768
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ ++Q + E +EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLPALSIMPNRQLQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V DN T+++V + R +L + L + + +I+ A+I+ G D F+VT
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+TD + + +L
Sbjct: 888 DLTGDKITDPGRLEALRAAL 907
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 32/220 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G T + + D G+ + + + ++++A++ T A ++ G P +
Sbjct: 728 GATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFGED 787
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD- 233
Q+ RIE + + L G ++ +A + P+ R
Sbjct: 788 DQLARIERSIADGLTG-----GVQLVPKLA-------------------KRPLPRRGAGA 823
Query: 234 ---YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
P V N A ++V+ V +DR LL + L + ++ A I GERA
Sbjct: 824 FEVQPFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADT 883
Query: 291 FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLEL 330
FY+ + G I ++P R ++ L AA+ AS+ ++ EL
Sbjct: 884 FYVTDLTGDKI-TDPGR---LEALRAALSDAASDEMQAEL 919
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ Q++++I L + L+ +D T +RR+ + L+H
Sbjct: 761 NNPQRVEQIRKGLTDALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V P I
Sbjct: 877 LQDAI-VEQLSVSHEPTI 893
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPQLCSRLQDAI 881
>gi|358448298|ref|ZP_09158802.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
gi|357227395|gb|EHJ05856.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
Length = 881
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 126/300 (42%), Gaps = 47/300 (15%)
Query: 136 VLADLQCSVVEAKVW-THNGRIASLIYVKDC-----NSGSPIEDSQQIDRIEARLRNVLK 189
VL S K+W T + +Y++ + +PI+ + + ++ R +L
Sbjct: 577 VLTVCDISATNPKLWNTWRASLLRQLYIEAKRALRRGTETPIDRQEWVRATQSEAREILH 636
Query: 190 GDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH--STDYPVVTVQN---WAD 244
N + + ++ T E Q D ++ ++RH +TD P+V +++
Sbjct: 637 AQN--MTDEQIDAIWDTVDEDYFLQDSTVDIAWQTAAIIRHGDNTD-PLVLIRDTRGGPT 693
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-GERAYLEFYIRHIDGTPISS 303
YS + + KDR L L + + A I+++ G + + + G P+
Sbjct: 694 DGYSQIIIYMKDRVALFAATTAVLEQLNLNIVDARISSSEGPYSISSYVVLDEKGQPLGI 753
Query: 304 EPERQ-----RVIQCLEAAVG------RRASEGVR--------------------LELCM 332
+P R+ R+I+ L+ RR ++ +E+
Sbjct: 754 DPARKERVRLRLIEELDDPDDYPDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVIT 813
Query: 333 EDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEAVRQKI 391
DR GLLA + + E+ + ++ A+++T + ++F+VTDE G P +P + +A++Q +
Sbjct: 814 PDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPIREPAVCQALQQDL 873
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ ++Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSITPNRQLQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEA 386
+E+ DR GLL + + GL V +A V T EA+++FYV D G P +P + A
Sbjct: 711 VEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVFYVVDAQGRPLREPAALSA 770
Query: 387 VRQKI 391
+R+K+
Sbjct: 771 LREKV 775
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+ PRV I TAT+V+V + R G+L Q + L + KA + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 80 HVTDLNGNKLTDESVISYIEQSL 102
+V D G L + + +S + + +
Sbjct: 753 YVVDAQGRPLREPAALSALREKV 775
>gi|313672568|ref|YP_004050679.1| UTP-glnb uridylyltransferase, glnd [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939324|gb|ADR18516.1| UTP-GlnB uridylyltransferase, GlnD [Calditerrivibrio nitroreducens
DSM 19672]
Length = 856
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
K + ++N ++ DN P T+V + + G+L + V L + ++KA IS+D
Sbjct: 766 KKIFKVN-RKIEFDNVTSPIYTIVDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNR 824
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSL 102
+D F++TD GNK+ D+S++ I + +
Sbjct: 825 VVDSFYITDEFGNKIEDKSMLQTIREEI 852
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+++ ED GLL + F + ++V +A++ST+ + ++ FY+TDE GN D +++
Sbjct: 788 VDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNRVVDSFYITDEFGNKIEDKSMLQT 847
Query: 387 VRQKI 391
+R++I
Sbjct: 848 IREEI 852
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 116 LTALELT--GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
L E+T D +GLL +V VLA +++ A+++T N IA + N+ S
Sbjct: 671 LNCFEITICTFDSIGLLKKVSGVLASFNINILGAQIYTLNRMIAIDKIQVNMNNESVEFI 730
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+++ IE R+ +VL G ++ ++ ++ ++ +++ ++ +R E
Sbjct: 731 AERFPDIERRIHDVLSGKVNVEDL-LSKTLGTIYSRKKIFKV---NRKIE---------- 776
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
N Y++V++ +D LL+ ++ + V A I+T R FYI
Sbjct: 777 -----FDNVTSPIYTIVDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNRVVDSFYI 831
Query: 294 RHIDGTPISSEPERQRV 310
G I + Q +
Sbjct: 832 TDEFGNKIEDKSMLQTI 848
>gi|148825740|ref|YP_001290493.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229847338|ref|ZP_04467440.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
gi|166226151|sp|A5UBF9.1|GLND_HAEIE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148715900|gb|ABQ98110.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229809763|gb|EEP45487.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
Length = 863
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+ +S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLSALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKAGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
S +V+ V+ DR +LF +V L+++ V A + T G FY++ DG P++ +
Sbjct: 693 STTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQEADGRPVADDT 752
Query: 306 ERQRVIQCLEAAVG 319
R+ + + + AA+G
Sbjct: 753 RRREIARAVLAALG 766
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
P+V+ D+ + T T+++V + R G+L V+ L++L L + A +++ G +D F+
Sbjct: 681 GPPQVIFDDGLGST-TVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFY 739
Query: 81 VTDLNGNKLTDES 93
V + +G + D++
Sbjct: 740 VQEADGRPVADDT 752
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
A+E LEL DR GLLA V R F E + ++ A+++T + ++F++TD+ G P
Sbjct: 848 ANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGAP 904
>gi|78357352|ref|YP_388801.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
gi|78219757|gb|ABB39106.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
Length = 872
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 78/203 (38%), Gaps = 25/203 (12%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
L D+ GL S + VLA V A + G + V D SP D
Sbjct: 691 LVFAAKDQPGLFSVLTGVLALHGLDVFSADAFVWGGGV-----VLDVFRVSPPPDPLYAR 745
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHT---ERRLHQMMFADRDYERMPVLRHSTDYP 235
A++R +V A+T + RL +M R PV +
Sbjct: 746 DFWAKVRG-------------SVHFALTGKLSLDFRLEEM----RSRSLSPVQKAGGGRT 788
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
VT+ N YSV+++ DR LL+D+ T+ M + A I T G + F +R
Sbjct: 789 EVTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSFSVRD 848
Query: 296 IDGTPISSEPERQRVIQCLEAAV 318
+ G + E + + V Q L AV
Sbjct: 849 VFGNKLLEEQQCEEVRQALLHAV 871
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ ++Q + E +EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLPALSITPNRQLQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD-EALNIFYVTDEMG 376
+GR A+ + +DR GL AD++R F G NV A+V T AL++FYV D G
Sbjct: 742 IGRNATA---FSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHALDVFYVQDSQG 798
Query: 377 NPA---DPKIIEAVRQKIGLSNLKVKELPMIY 405
P D + ++ Q++ + L P+ Y
Sbjct: 799 LPFGHDDAQRMKQAEQQLEQAALGHLPPPVAY 830
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V D+A AT+++V R G+L + V V+ L + I A+I G +D F+V
Sbjct: 844 APTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYV 903
Query: 82 TD 83
TD
Sbjct: 904 TD 905
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 37/202 (18%)
Query: 227 VLRH-STDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L+H + + P+V ++ A R + + + + D+ V ++ + + A I T
Sbjct: 680 ILQHPAGNDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIIT 739
Query: 283 AGERAYLEFYI-RHIDGTPISSEPERQR-----VIQCLE------AAVGRRASEGVR--- 327
+ + L+ YI DG I P R R +I L+ A + RR ++
Sbjct: 740 STSQFTLDTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFA 799
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
LEL DR GLLA + R F E L++ A+++T + ++F+
Sbjct: 800 FPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFF 859
Query: 371 VTDEMGNP-ADPKIIEAVRQKI 391
VTD P +DP++ ++ I
Sbjct: 860 VTDANNQPLSDPELCRRLQDAI 881
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A ++ L ++ +A++ T + Y V D + G
Sbjct: 701 FEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYIVLDADGGRIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ +I I L + LK +D + +RR+ + L+H
Sbjct: 761 DNPARIREIREGLIDALKNPDDYPAI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
++ + P+ S+PE R +Q
Sbjct: 859 FVTDANNQPL-SDPELCRRLQ 878
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF VT
Sbjct: 802 PQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + ++ ++
Sbjct: 862 DANNQPLSDPELCRRLQDAI 881
>gi|84496349|ref|ZP_00995203.1| putative ppGpp synthetase [Janibacter sp. HTCC2649]
gi|84383117|gb|EAP98998.1| putative ppGpp synthetase [Janibacter sp. HTCC2649]
Length = 766
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKII 384
V+L++ DR LL+DVTR E+G+N+ A V T RD + + T EMG+P+ +I
Sbjct: 690 VQLQVEALDRSALLSDVTRVLSESGVNILSASVHTSRDRVAGLKF-TFEMGDPSHLDHVI 748
Query: 385 EAVRQKIGL 393
+VR G+
Sbjct: 749 RSVRGIAGV 757
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V S G+L + L D ++L++ A++S+ G +D F+VT
Sbjct: 731 PRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVT 790
Query: 83 DLNGNKLTD---ESVISYIEQSL 102
G L ESV +E++L
Sbjct: 791 GPEGAPLPGDEAESVARKLEETL 813
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V+V A R +V+ V+ +D LLF + L D +V A ++T G A FY+
Sbjct: 731 PRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVT 790
Query: 295 HIDGTPISSEPERQRVIQCLE 315
+G P+ + E + V + LE
Sbjct: 791 GPEGAPLPGD-EAESVARKLE 810
>gi|374299916|ref|YP_005051555.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
gi|332552852|gb|EGJ49896.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
Length = 940
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V N A Y+V+ V+ DR L+++ L + VF A I+T GER F++R
Sbjct: 856 PEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVFLAKIDTMGERVADIFFVR 915
Query: 295 HIDGTPISSEPER-QRVIQCLEAAV 318
DG +P+R V+Q L A
Sbjct: 916 --DGEGQKLDPDRADEVMQALRDAA 938
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
G + + D GL S + V+A +++ A++ T NG+ ++ V + G I
Sbjct: 708 KGYSNFTICTLDVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQV-NSPQGFVIT 766
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
D + R+E +R VL+G K+ V V ++R + ++ + P
Sbjct: 767 DESRWQRLEDDMRQVLQG-------KVRVGTLV---KKRYRPTILTEKPKPKFPTR---- 812
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
V + N Y+V+++ D+ LL+ + TLT++ + + ++T ++ FY
Sbjct: 813 ----VEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFY 868
Query: 293 IRHIDG 298
++ I G
Sbjct: 869 VKDIFG 874
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L LT+L L I + +S+ DVF+V D
Sbjct: 812 RVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKD 871
Query: 84 LNGNKL 89
+ G+KL
Sbjct: 872 IFGHKL 877
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+++ D+ GLL +T T E GL + ++VST+ D+ ++FYV D G+
Sbjct: 826 IDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFGH 875
>gi|383782218|ref|YP_005466785.1| putative protein P-II uridylyltransferase [Actinoplanes
missouriensis 431]
gi|381375451|dbj|BAL92269.1| putative protein P-II uridylyltransferase [Actinoplanes
missouriensis 431]
Length = 756
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP-----ISSE 304
V V DR LL V L V A T RA +EFY G+P ++++
Sbjct: 589 VAVAAADRRGLLAGVAACLAMHRLDVVAANTATVNGRAIVEFYTSPRFGSPYEPVALAAD 648
Query: 305 PER---------QRVIQCLEAAVGRRAS-----------EGVRLELCMEDRQGLLADVTR 344
R QRV +A G AS + V LEL D GLL VT
Sbjct: 649 LRRVAAGDVSVTQRVRARAMSARGGTASPRVVWQRAAATDAVVLELRAADSPGLLYRVTS 708
Query: 345 TFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
E G + A +ST + ++ FY+ +PA+ +EA
Sbjct: 709 ALDEAGAEIRAARISTLGGDVVDAFYLVGTWADPAERDRVEAA 751
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 80/212 (37%), Gaps = 39/212 (18%)
Query: 114 NGLTALELTG-------TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
GL + L G DR GLL+ V A LA + VV A T NGR A + +
Sbjct: 577 GGLPVVHLDGDRVAVAAADRRGLLAGVAACLAMHRLDVVAANTATVNGR-AIVEFYTSPR 635
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
GSP E + A LR V GD V+ T+R + M A
Sbjct: 636 FGSPYEPVA----LAADLRRVAAGD-------------VSVTQRVRARAMSA-------- 670
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
R T P V Q A V+ ++ D LL+ V L + + A I+T G
Sbjct: 671 --RGGTASPRVVWQRAAATDAVVLELRAADSPGLLYRVTSALDEAGAEIRAARISTLGGD 728
Query: 287 AYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
FY+ P ER RV + +AV
Sbjct: 729 VVDAFYLVGTWADPA----ERDRVEAAVLSAV 756
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 324 EGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKI 383
+G R+ + DR+GLLA V + L+V A +T A+ FY + G+P +P
Sbjct: 585 DGDRVAVAAADRRGLLAGVAACLAMHRLDVVAANTATVNGRAIVEFYTSPRFGSPYEPVA 644
Query: 384 IEAVRQKIGLSNLKVKE 400
+ A +++ ++ V +
Sbjct: 645 LAADLRRVAAGDVSVTQ 661
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGSKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSIAPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|354598884|ref|ZP_09016901.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
gi|353676819|gb|EHD22852.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
Length = 894
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V + + A R + + ++C+DR L V L V A I T+ +
Sbjct: 688 LLEHDSSKPLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDG 747
Query: 287 AYLE-FYIRHIDGTPISS---EPERQRVIQCL-----EAAVGRRASEGVR---------- 327
++ F + DG+P++ E R + Q L + RR+S +R
Sbjct: 748 MAMDTFIVLEPDGSPLAQDRHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSF 807
Query: 328 ----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
+EL D+ GLLA + F + L++ A +ST + ++F + D
Sbjct: 808 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 378 PADPKIIEAVRQKI 391
P++ ++Q++
Sbjct: 868 ALKPELRVKLQQRL 881
>gi|163785714|ref|ZP_02180233.1| protein-P-II uridylyltransferase, putative [Hydrogenivirga sp.
128-5-R1-1]
gi|159879017|gb|EDP73002.1| protein-P-II uridylyltransferase, putative [Hydrogenivirga sp.
128-5-R1-1]
Length = 367
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHI 296
V + N Y++ ++ +DR LLFD++ + + V A + T GERA FY+R
Sbjct: 295 VKIDNRTSDQYTIFDISAEDRIGLLFDIIYIFSKFDIYVHIAKVTTQGERARDAFYVRTP 354
Query: 297 DGTPISSEPERQR 309
I+ E +R
Sbjct: 355 QKEKITDEKPLKR 367
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
S +V+ V+ DR +LF +V L+ + V A + T G FY++ DG P++ +
Sbjct: 693 STTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQEADGRPVADDA 752
Query: 306 ERQRVIQCLEAAVG 319
R+ + + + AA+G
Sbjct: 753 RRREIARAVLAALG 766
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
P+V+ D+ + T T+++V + R G+L V+ L+ L L + A +++ G +D F+
Sbjct: 681 GPPQVIFDDGLGST-TVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFY 739
Query: 81 VTDLNGNKLTDES 93
V + +G + D++
Sbjct: 740 VQEADGRPVADDA 752
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G T + D GL S + V+A +++ A++ T+ N ++ ++ V + G I +
Sbjct: 707 GYTNCTVCTYDIPGLFSMITGVMAANGMNILGAQIHTNTNEKVLDILQV-NSPQGFVITE 765
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ R E LR VL+G K+ V V +R + ++ +P
Sbjct: 766 ESRWARFETDLRQVLEG-------KVRVGQLVA---KRHRPSILTEKAKPTVPAR----- 810
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
V + N Y+V+++ D+ LL+ + TLT + + + I+T ++ FY+
Sbjct: 811 ---VEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 294 RHIDGTPISSEPERQRVIQCLEAAV 318
+ I G IS + + + + L AAV
Sbjct: 868 KDIFGQKISEPAKLEEIRKELLAAV 892
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P+ L E K + RV IDN V T++ + + + G+L LT L L I +
Sbjct: 796 PSILTEKAKPTV---PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVS 852
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
IS+ DVF+V D+ G K+++ + + I + L
Sbjct: 853 KISTKVDQVADVFYVKDIFGQKISEPAKLEEIRKEL 888
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+++ D+ GLL +T T GL + +++ST+ D+ ++FYV D G ++P +E
Sbjct: 824 IDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKISEPAKLEE 883
Query: 387 VRQKI 391
+R+++
Sbjct: 884 IRKEL 888
>gi|357134795|ref|XP_003569001.1| PREDICTED: uncharacterized protein LOC100846101 [Brachypodium
distachyon]
Length = 445
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTP------- 300
SVV V C D+ L D+ T+ + + ++T G+ Y+ F++ + +P
Sbjct: 48 SVVTVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGQWCYVIFWV--VPRSPSINVRWG 105
Query: 301 -----ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTR 355
+ S I + L+L DR+GLL DVT E L + R
Sbjct: 106 SLKNRLMSMCPSSYAIPFYPEITQPAPPQFYLLKLFSTDRKGLLHDVTHILSELELIIHR 165
Query: 356 AEVSTERD-EALNIFYVTDEM 375
+VST D +N+F++TD M
Sbjct: 166 VKVSTTPDGRVVNLFFITDGM 186
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+EL DR GLLA V R F E + ++ A+++T + ++F++TD+ G P DP+
Sbjct: 821 VELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPLTDPERQAR 880
Query: 387 VRQKI 391
+R+++
Sbjct: 881 LRERL 885
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ N T +ELT DR GLL+ V + + ++ AK+ T R+ + ++ D +G
Sbjct: 812 QDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAGE 870
Query: 170 PIEDSQQIDRIEARL 184
P+ D ++ R+ RL
Sbjct: 871 PLTDPERQARLRERL 885
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 23/180 (12%)
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
L + A + L S+ +A++ T + ++ + G PI D Q+++ I L L
Sbjct: 722 LFAATAAAMEQLGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLEEIRHHLVEEL 781
Query: 189 KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYS 248
D + HT R+L R VV Q+ A+ + +
Sbjct: 782 DDPADY------PRIVTRHTSRQLKHFKVPTR---------------VVIEQDTAN-ART 819
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
+V + DR LL V + + + A I T GER F+I G P+ ++PERQ
Sbjct: 820 IVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPL-TDPERQ 878
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVI+ T+V++ + R G+L ++ + ++ + A I++ G DVF +TD
Sbjct: 807 RVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD 866
Query: 84 LNGNKLTD 91
G LTD
Sbjct: 867 KAGEPLTD 874
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V S G+L + L D N+ ++ A++S+ G +D F+VT
Sbjct: 749 PRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYVT 808
Query: 83 DLNGNKLTD---ESVISYIEQSL 102
G L ESV +E++L
Sbjct: 809 GPEGAPLPGDEAESVARKLEETL 831
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 301 ISSEPERQRVIQCLEAAVGRRASEG----VRLELCM----EDRQGLLADVTRTFRENGLN 352
S++ RQ Q A+ G+ +++ R C DR GL AD+ R F G N
Sbjct: 725 FSADEIRQHARQVWSASEGKASAQAFIDTTRNAACFCITGPDRPGLFADLARCFTNLGAN 784
Query: 353 VTRAEVSTERD-EALNIFYVTDEMGNP 378
V A+V T +AL++FYV D G P
Sbjct: 785 VVGAQVFTSTTAQALDVFYVQDTQGKP 811
>gi|294013488|ref|YP_003546948.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
gi|292676818|dbj|BAI98336.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
Length = 919
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LLF + L + V A + T GERA FY+
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ I S+ Q + + L A G +E
Sbjct: 886 DLLAGKIESKARLQTLERRLLEAAGGEVAE 915
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ ++ + +E+ L
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|89092087|ref|ZP_01165042.1| PII uridylyl-transferase [Neptuniibacter caesariensis]
gi|89083822|gb|EAR63039.1| PII uridylyl-transferase [Oceanospirillum sp. MED92]
Length = 899
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 32/127 (25%)
Query: 297 DGTPISSEPE-----RQRVIQCLEAA------VGRRASEGVRL----------------- 328
D TP+S P+ +QR+I+ L+ + RR ++L
Sbjct: 761 DNTPLSENPDHLKSIKQRLIEELDDPNDYPEIIQRRVPRQMKLFATPTQVFLSNDAIAHQ 820
Query: 329 ---ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKII 384
E+ DR GLLA + F + L+V +A++++ + + F++TDE G P +DP++
Sbjct: 821 TVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFITDEQGLPISDPELC 880
Query: 385 EAVRQKI 391
+ ++ +I
Sbjct: 881 QQLQNEI 887
>gi|449440141|ref|XP_004137843.1| PREDICTED: uncharacterized protein LOC101221909 [Cucumis sativus]
gi|449517335|ref|XP_004165701.1| PREDICTED: uncharacterized LOC101221909 [Cucumis sativus]
Length = 411
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
D +V+ V C D+T L D+ + + + T G+ Y+ F++ T
Sbjct: 17 DDEPTVITVNCPDKTGLGCDLCRIILFFGLNIVRGDVTTDGKWCYIVFWVTGNSSTRWGL 76
Query: 304 EPERQRVIQ----CLEAAV---------GRRASEGVRLELCMEDRQGLLADVTRTFRENG 350
+QR+++ C A++ + + L+ C DR+GLL DVT E
Sbjct: 77 L--KQRLMEVCPSCSSASMLSYFRPEPQSSKPPDMFLLKFCCHDRRGLLHDVTWVLCELE 134
Query: 351 LNVTRAEVSTERD-EALNIFYVTD 373
L + + +VST D + +++F++ D
Sbjct: 135 LLIEKVKVSTTPDGKVMDLFFIID 158
>gi|334345822|ref|YP_004554374.1| UTP-GlnB uridylyltransferase GlnD [Sphingobium chlorophenolicum
L-1]
gi|334102444|gb|AEG49868.1| UTP-GlnB uridylyltransferase, GlnD [Sphingobium chlorophenolicum
L-1]
Length = 919
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LLF + L + V A + T GERA FY+
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ I S+ Q + + L A G +E
Sbjct: 886 DLLAGKIESKARLQTLERRLLEAAGGEVAE 915
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ ++ + +E+ L
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
+EL DR GLLA V + F G+ V A+++T + A ++F++TD+ G P
Sbjct: 814 VELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITDDQGQP 864
>gi|284032664|ref|YP_003382595.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
gi|283811957|gb|ADB33796.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
Length = 752
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD 380
L++ DR GLL D+T G ++ A VST E +++FY+TD G+P D
Sbjct: 683 LQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLD 735
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 760
Query: 173 DSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ ++ I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPVRVQEIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I D P+S
Sbjct: 859 FITDADNHPLS 869
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 817 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 877 LQEAI-IKQLSVNSQP 891
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + + L+D + S +++++
Sbjct: 861 TDADNHPLSDPQLCSRLQEAI 881
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPI 171
F+ T + + D LLS++ VLA ++ +AK++T +G + V D + I
Sbjct: 666 FDDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI 725
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D + +IE L L G ++ VSM + +RL Q +F ++ H
Sbjct: 726 -DPSKYQKIENDLTKALTGYLEVNKE---VSMLKSRW-KRLEQKLFKRSGQVKVSFDNH- 779
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
Y++++V DR L+ + ++++ V+ A I+T G+ F
Sbjct: 780 -------------ERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIVDSF 826
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
Y+ + G IS P Q I+
Sbjct: 827 YVLNQSGKKIS--PSDQAFIK 845
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
DR G L +TR E GL + A++ST+ D+ ++ FYV ++ G P
Sbjct: 791 DRLGFLYHITRKMSELGLVIHFAKISTKGDDIVDSFYVLNQSGKKISP 838
>gi|417949099|ref|ZP_12592238.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
gi|342808707|gb|EGU43851.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
Length = 873
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER------QRVIQCLEAAVGRRASEG 325
RH DG P + R ++ L + ++ +
Sbjct: 739 LDQHGNAIDEARHKAVAKHLTHVLADGRPTKVKTRRTPRNLQHFKVKTLVEFLPTKSKKR 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA V TF E G+N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGGRLSEEQEQ 858
Query: 386 AVRQKI 391
++R+++
Sbjct: 859 SLRERL 864
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
++ + RV + N T+V+V + + G+L + ++L L L I A I+++ +D
Sbjct: 809 LKKDFSRVFVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVD 868
Query: 78 VFHVTDLNGNKLTDESVISYIEQSL 102
VF+V+DL GNK+ E I I++ +
Sbjct: 869 VFYVSDLKGNKVLSEERIEGIKEQV 893
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA-DPKIIEA 386
+E+ D+ GLL D+TR GL + A ++T ++ +++FYV+D GN + IE
Sbjct: 829 VEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLKGNKVLSEERIEG 888
Query: 387 VRQKIG 392
+++++G
Sbjct: 889 IKEQVG 894
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASL--IYVKDCNSGSPIEDSQQI 177
+TG D G+ S + + + ++ +V T NG I + +Y +D G+ + +++
Sbjct: 724 ITGYDLPGIFSNIAGAILVNELEIISCRVQTFQNGMIFDVFTVYYRDSMLGASVSYWKEV 783
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
++NVL G + + R + R L+ D+ V
Sbjct: 784 I---GYIQNVLLGKRQLELS----------------------RSWTRRKTLK--KDFSRV 816
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHID 297
V N Y+VV V +D+ LL+D+ L + + A+I T E+ FY+ +
Sbjct: 817 FVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLK 876
Query: 298 GTPISSE 304
G + SE
Sbjct: 877 GNKVLSE 883
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y V D + S
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPARVKKIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I D P+S
Sbjct: 859 FITDADNQPLS 869
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCLR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P +
Sbjct: 877 LQAAI-VEQLSVSQEPGV 893
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I L + H+ +++ +T LELT D
Sbjct: 764 ARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ V + + S+ AK+ T R+ + ++ D N+ P+ D R++
Sbjct: 824 RPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDPLLCSRLQ 878
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 17 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 76
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 77 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 117
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 118 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 174
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 175 FITDANNQPLS 185
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 133 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 192
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 193 LQDAI-VEQLSVSQEPDI 209
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +T
Sbjct: 118 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 177
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + S ++ ++
Sbjct: 178 DANNQPLSDPLLCSRLQDAI 197
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLPALSIAPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|309811519|ref|ZP_07705301.1| ACT domain protein [Dermacoccus sp. Ellin185]
gi|308434570|gb|EFP58420.1| ACT domain protein [Dermacoccus sp. Ellin185]
Length = 489
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP----KI 383
+E+ DR GLL DV F ++V A ++T + + FYVTDE G+P P ++
Sbjct: 418 IEVRAADRLGLLFDVGSAFAAERVSVRSAHIATYAGRSADTFYVTDEQGSPLAPPHAARV 477
Query: 384 IEAVRQKIGLSN 395
I AV +G +
Sbjct: 478 IGAVLDAVGTAG 489
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQI 177
L+ DR+GLL +V VL +++ ++ KV T +GR+ L ++ D + + +
Sbjct: 122 LKFCCYDRIGLLHDVTCVLCEMELTIRRVKVSTTPDGRVMDLFFITD--ARELLHTKSRR 179
Query: 178 DRIEARLRNVLKGDN----DIRSAKMTVSMAVTHT---ERRLHQMMFADRDYERMPVLRH 230
+ +L++VL GD+ +I SA +S + + + + MF++ D R
Sbjct: 180 EEAYEKLQSVL-GDSVTSCEIESATQDMSSCLQASALLPPLVLEQMFSEVDVVDEQSNRS 238
Query: 231 STDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE--RA 287
+D + VT+ N ++++ +QC D LL+D++ T+ D V + AG+ R
Sbjct: 239 RSDSRLSVTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRF-YAGQKGRC 297
Query: 288 YLEFYIRHIDGTPISSEPERQRVI 311
++ + DG I + ++QR +
Sbjct: 298 EVDLFAVQSDGKKILDQ-QKQRTM 320
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 34/153 (22%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+VV V C D+T L D+ + V ++T G Y+ ++ +S P R
Sbjct: 23 TVVTVSCPDKTGLGCDLCRLVLLFGLNVLKGDMSTDGRWCYIVLWL-------AASPPPR 75
Query: 308 QRVIQ-----------C-LEAAVG----------RRASEG----VRLELCMEDRQGLLAD 341
R + C + A G ++G L+ C DR GLL D
Sbjct: 76 ARTVAWDLLKDRIVQLCPVPAPFGVDTAYLAAAGLALADGEPQVFLLKFCCYDRIGLLHD 135
Query: 342 VTRTFRENGLNVTRAEVSTERD-EALNIFYVTD 373
VT E L + R +VST D +++F++TD
Sbjct: 136 VTCVLCEMELTIRRVKVSTTPDGRVMDLFFITD 168
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E ++V +A++S+ + + F++TD P +DP++
Sbjct: 811 LEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITDSQNQPISDPELCRE 870
Query: 387 VRQKI 391
++Q I
Sbjct: 871 LQQAI 875
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 20 MNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
TP R+ I N T++++ + R G+L ++ + ++ ++KA ISS G D
Sbjct: 792 FTTPTRMTISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDF 851
Query: 79 FHVTDLNGNKLTDESVISYIEQSL 102
F +TD ++D + ++Q++
Sbjct: 852 FFITDSQNQPISDPELCRELQQAI 875
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
+E+ DR GLL + R F + GL+V A V T EA+++FYV D G P
Sbjct: 692 VEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVFYVVDRAGRP 742
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
+ + PRV + + TAT+V+V + R G+L + D L ++ A + + G +D
Sbjct: 672 VPVAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVD 731
Query: 78 VFHVTDLNGNKLTDES 93
VF+V D G LTDE+
Sbjct: 732 VFYVVDRAGRPLTDEA 747
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 106 HYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
H G + NG A+ + DR GLL VLA + VV A G A + +
Sbjct: 574 HGGGAIRVNG-GAVTVVAPDRAGLLWRAAGVLAAHRM-VVRAASAASAGSTAVIEFAVVP 631
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
GSP + + +EA LR VL G DI E+RL + + R R+
Sbjct: 632 EYGSPPDPAT----LEADLRLVLAGRLDI--------------EQRLARRTRSLRPA-RV 672
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
PV P VT+ + A + +VV V+ DR LL+ + D V A + T G
Sbjct: 673 PVA-----PPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGA 727
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
A FY+ G P++ E +R +V + AA+
Sbjct: 728 EAVDVFYVVDRAGRPLTDEAQRAQVRDQVLAAL 760
>gi|390169710|ref|ZP_10221643.1| PII uridylyl-transferase [Sphingobium indicum B90A]
gi|389587714|gb|EIM65776.1| PII uridylyl-transferase [Sphingobium indicum B90A]
Length = 919
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V+ V +DR LLF + L + V A + T GERA FY+
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ I S+ Q + + L A G +E
Sbjct: 886 DLLAGKIESKGRLQTLERRLLEAAGGEVAE 915
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ + + +E+ L
Sbjct: 886 DLLAGKIESKGRLQTLERRL 905
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGTKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 69/185 (37%), Gaps = 52/185 (28%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
PVV + N +D +VV+VQ D L D V +L + V A + G+ +FY+
Sbjct: 34 PVVLIDNRSDPLATVVSVQFSDVLGQLLDTVESLKALGLNVSRAEV--TGDENPNKFYVT 91
Query: 294 ----------------------------------------------RHIDGTPISSEPER 307
R +D P+ + P
Sbjct: 92 DAATSEKVVKSEQIENIRMAIINNMLYYHPESKQYFEGGTVDMPGNRDVDANPLGARPRG 151
Query: 308 QRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALN 367
+ + A+G S RL + DR GLL D+ RT ++ LNV AE+ T +A +
Sbjct: 152 KVATKVTIEAMGAARS---RLIVETADRPGLLVDIVRTLKDLSLNVVSAEIDTIGPKASD 208
Query: 368 IFYVT 372
Y+T
Sbjct: 209 TVYLT 213
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSKKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|68250319|ref|YP_249431.1| PII uridylyl-transferase [Haemophilus influenzae 86-028NP]
gi|81170617|sp|Q4QJM6.1|GLND_HAEI8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68058518|gb|AAX88771.1| [protein-PII] uridylyltransferase [Haemophilus influenzae 86-028NP]
Length = 863
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E ++EL D+ GLLA
Sbjct: 749 LEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQMELVALDKAGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 36/201 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+L H T + P+V V +R Y + V + KD L V LT + + A I T
Sbjct: 694 ILAHGTKEEPLVLVGKTDERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIIT 753
Query: 283 AGERAYLEFY-IRHIDGTPISSEPERQRVIQCLEAAVG--------------------RR 321
A + L+ Y I G + E +++ + L + R
Sbjct: 754 AANQYTLDTYVIMEEGGAAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRV 813
Query: 322 ASE----------GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
A+E L++ DR GLLA++ + F +G+ + A+++T + A ++FY+
Sbjct: 814 ATEITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYI 873
Query: 372 TDEMGNPA-DPKIIEAVRQKI 391
TD G DP+ +++++
Sbjct: 874 TDTNGEMLHDPEFCATLKERL 894
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 26/210 (12%)
Query: 92 ESVISYIEQSLETIHYGRSN--SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
E+++++ + + G+++ + G T + + D L + A L L ++ +A++
Sbjct: 692 EAILAHGTKEEPLVLVGKTDERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARI 751
Query: 150 WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTE 209
T + YV G+ + D +I++I +LR L
Sbjct: 752 ITAANQYTLDTYVIMEEGGAAVVDETRIEQIARKLRTTLADPT----------------- 794
Query: 210 RRLHQMMFADRDYERMP-VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTL 268
F D + +P L+H +T+ N D +V+++ DR LL ++
Sbjct: 795 ------RFPDIVHRPLPRALKHFRVATEITLANDLDSRATVLDITTLDRPGLLAEIGKIF 848
Query: 269 TDMEYVVFHATINTAGERAYLEFYIRHIDG 298
++ A I T GERA FYI +G
Sbjct: 849 VASGVLIQGAKIATFGERAEDVFYITDTNG 878
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ + N + AT++ + + R G+L E ++ +LI+ A I++ G DVF++TD
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 85 NGNKLTDESVISYIEQSL 102
NG L D + +++ L
Sbjct: 877 NGEMLHDPEFCATLKERL 894
>gi|269138091|ref|YP_003294791.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|387866822|ref|YP_005698291.1| uridylyltransferase [Edwardsiella tarda FL6-60]
gi|267983751|gb|ACY83580.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|304558135|gb|ADM40799.1| uridylyltransferase [Edwardsiella tarda FL6-60]
Length = 884
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+LRH D P+V V A R + + + DR L V L V A I T +
Sbjct: 681 LLRHRGDGPLVLVSQHATRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDN 740
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVI-QCLEAA--------------------------V 318
++ F + DG+P++ P+R I Q LE A V
Sbjct: 741 YAMDTFVVLEPDGSPLA--PDRHDTIRQALEHALTQPHYHPPRARRAPARLRHFSVPTEV 798
Query: 319 GRRASEGVR---LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+ R +EL DR GLLA + F E GL++ A ++T + ++F + D
Sbjct: 799 SFLPAHNARRSYMELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGE 858
Query: 376 GNPADPKIIEAVRQKI 391
P++ + Q++
Sbjct: 859 RRALTPEMQRELAQRL 874
>gi|260582819|ref|ZP_05850605.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
gi|260094145|gb|EEW78047.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
Length = 863
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSITPNRQLQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|114777454|ref|ZP_01452451.1| PII uridylyl-transferase [Mariprofundus ferrooxydans PV-1]
gi|114552236|gb|EAU54738.1| PII uridylyl-transferase [Mariprofundus ferrooxydans PV-1]
Length = 854
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RI A L G +++ +A +S M F R + + L STD V
Sbjct: 607 RIRAALDGAGGGRDELEAAVAQMSRGCI--------MHFPPRHLQHIVQLIASTDGDGVK 658
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHID 297
DR +S+ V ++R+ L + TLT + A + + L+ F+++ +D
Sbjct: 659 YWVDRDRGHSLFFVVARERSGLFAALTATLTSGHGSIMAAYADELADGRVLDVFHLQSVD 718
Query: 298 GTP--ISSEPER--QRVIQCLEA---------------AVGRRASEGVR----------- 327
G+P I S+ ER R+ Q L A + RR VR
Sbjct: 719 GSPFDIESDLERLQSRITQLLAADTLSRMAIDASFKINVLMRRVEVRVRQLSEASFRATA 778
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+E+ D+ LLA + G + A VST + A+++F++TD
Sbjct: 779 IEVSAADQPRLLARLADAIATEGYQLHSATVSTFGERAVDVFFITD 824
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIED 173
G + + +R GL + + A L S++ A +GR+ + +++ + GSP +
Sbjct: 666 GHSLFFVVARERSGLFAALTATLTSGHGSIMAAYADELADGRVLDVFHLQSVD-GSPFDI 724
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
++R+++R+ +L D R A + S + RR+
Sbjct: 725 ESDLERLQSRITQLLAADTLSRMA-IDASFKINVLMRRVE-------------------- 763
Query: 234 YPVVTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
V V+ ++ S+ + + V D+ +LL + + Y + AT++T GERA F
Sbjct: 764 ---VRVRQLSEASFRATAIEVSAADQPRLLARLADAIATEGYQLHSATVSTFGERAVDVF 820
Query: 292 YIRHIDGTPISSE 304
+I D +++E
Sbjct: 821 FITDSDSHQLNAE 833
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I L + H+ +++ +T LELT D
Sbjct: 764 ARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D R++
Sbjct: 824 RPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDPLLCSRLQ 878
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
>gi|336322370|ref|YP_004602337.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
gi|336105951|gb|AEI13769.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
Length = 863
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++V DN + T+V V + + G+L + V +++ + KA IS+D +D F++ D
Sbjct: 777 KIVFDNDISTLYTVVDVYTEDKVGLLYNLLTVFEKMHINVVKAKISTDVDRVVDSFYIID 836
Query: 84 LNGNKLTDESVISYIEQSLETI 105
N NK+T +S IS I+ L I
Sbjct: 837 KNKNKVTGDSEISRIKTRLMKI 858
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +++ D+VGLL + V + +VV+AK+ T R+ Y+ D N DS +
Sbjct: 789 TVVDVYTEDKVGLLYNLLTVFEKMHINVVKAKISTDVDRVVDSFYIIDKNKNKVTGDS-E 847
Query: 177 IDRIEARLRNVLK 189
I RI+ RL +LK
Sbjct: 848 ISRIKTRLMKILK 860
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVSQEPDI 893
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIR 294
+V + N + + V C D+ L VV T+ ++ + A I T+ + + F I
Sbjct: 674 LVKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIIT 733
Query: 295 HIDGTPISSEPERQ----------------------RVIQCLEAAVGRR-----ASEGVR 327
++G + SE R+ R +Q R E
Sbjct: 734 ELNGELVRSERRRELEAVLTSVLLGEKLPSVSFANNRQLQHFTVKTDVRFLKETKKEHTE 793
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
LE+ D+ GLLA +++ F E LN+ A+++T ++A + F +T+E G
Sbjct: 794 LEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|392955012|ref|ZP_10320563.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
gi|391857669|gb|EIT68200.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
Length = 894
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY 292
+ P++ V R +V V DR L L + + A INT + L+ Y
Sbjct: 695 ELPLILVSMLDGRGTTVF-VYTPDRDHLFGLSTGVLARLGLNILDARINTTADGFTLDSY 753
Query: 293 I-RHIDGTPISSEPERQRVIQCLEAA----------VGRRASEGVR-------------- 327
+ DG+ IS + + L V RR S+ ++
Sbjct: 754 VVMEGDGSAISQGHRFEEIRDSLHRVLADPNISVVDVNRRTSQKLKHFDTPTDVSFSLDK 813
Query: 328 ------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
LEL DR GLL+ + R F++ GL + A++ T + A ++F++TD P +D
Sbjct: 814 VRNRTILELVTADRPGLLSMIGRIFQKRGLLLDAAKIGTIGERAEDVFFITDADHKPISD 873
Query: 381 PKIIEAVRQ 389
P ++ +R+
Sbjct: 874 PSQLDELRE 882
>gi|386774319|ref|ZP_10096697.1| PII uridylyl-transferase [Brachybacterium paraconglomeratum LC44]
Length = 784
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P LR + D PVVT+ A R +VV V ++R LL DV T+T V A + T G
Sbjct: 691 PPLRTTEDAPVVTLLPGASREATVVQVNARNRPSLLADVAETITVHGLQVRSAHVMTLGR 750
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCL 314
RA Y+ G + P R++ L
Sbjct: 751 RAVDVLYLTDQHGRALDP-PTVGRIVAAL 778
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 324 EGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKI 383
E +++ +R LLADV T +GL V A V T A+++ Y+TD+ G DP
Sbjct: 711 EATVVQVNARNRPSLLADVAETITVHGLQVRSAHVMTLGRRAVDVLYLTDQHGRALDPPT 770
Query: 384 I 384
+
Sbjct: 771 V 771
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +EL TD GLLS++ VL D + +AK+ T R + Y D S +PI+D +
Sbjct: 803 FTVMELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQS-NPIQDHE 861
Query: 176 QIDRIEARLRNVLK 189
+ +E +++ L+
Sbjct: 862 TLQNLEQAIQSALR 875
>gi|317152370|ref|YP_004120418.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942621|gb|ADU61672.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 873
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+E+ DR G L D+ RT +GL++ A+++T + A +IF+V D G DP+ IE
Sbjct: 802 VEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAADIFHVRDHTGAKLTDPERIET 861
Query: 387 VRQKI 391
+R+ +
Sbjct: 862 LRRDL 866
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN TLV+V + R G L + + L+ L I A I++ D+FHV
Sbjct: 787 PIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAADIFHVR 846
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KLTD I + + L
Sbjct: 847 DHTGAKLTDPERIETLRRDL 866
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 55 VLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE---SVISYIEQSL--------- 102
L LN+L + +D + +DVF V++ DE V IEQ+L
Sbjct: 709 ALHGLNILAADLFTWAD-KTAVDVFTVSEPQDTLFMDEIWPRVARSIEQALTGRLDLAAR 767
Query: 103 ------ETIHYGRS------------NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+H G S + T +E+ DR+G L ++ L+ S+
Sbjct: 768 LAERRNSPLHKGNSAPRLRPIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSI 827
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
AK+ T GR A + +V+D ++G+ + D ++I+ +
Sbjct: 828 HIAKITTIKGRAADIFHVRD-HTGAKLTDPERIETL 862
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNDGESIG 760
Query: 173 DSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +I +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPTRIKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 298 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 357
Query: 387 VRQKIGLSNLKVKELPMIYHQKGE 410
++ I VK+L + Q G+
Sbjct: 358 LQDAI------VKQLSVNSEQGGD 375
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 182 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 241
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 242 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 279
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 280 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 339
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 340 FITDANNHPL-SDPQLCRQLQ 359
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 283 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 342
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + ++ ++
Sbjct: 343 DANNHPLSDPQLCRQLQDAI 362
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V+V A R +V+ V+ +D LLF + L D V A ++T G A FY+
Sbjct: 731 PRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYVT 790
Query: 295 HIDGTPISSEPERQRVIQCLE 315
+G P+ SE E V + LE
Sbjct: 791 GPEGAPLPSE-EAASVARKLE 810
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D ++ ++ A++S+ G +D F+VT
Sbjct: 731 PRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYVT 790
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
G L E S + ET+
Sbjct: 791 GPEGAPLPSEEAASVARKLEETL 813
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 101 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 160
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 161 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 198
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 199 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 258
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 259 FITDANNHPL-SDPQLCRQLQ 278
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 217 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 276
Query: 387 VRQKIGLSNLKVKELPMIYHQKGE 410
++ I VK+L + Q G+
Sbjct: 277 LQDAI------VKQLSVNSEQGGD 294
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 202 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 261
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + ++ ++
Sbjct: 262 DANNHPLSDPQLCRQLQDAI 281
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 425 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 484
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D ++ R+L FA
Sbjct: 485 NNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------- 525
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 526 ---PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 582
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 583 FITDANNHPL-SDPQLCRQLQ 602
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 541 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 600
Query: 387 VRQKI 391
++ +I
Sbjct: 601 LQDEI 605
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 525 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 584
Query: 82 TDLNGNKLTDESV 94
TD N + L+D +
Sbjct: 585 TDANNHPLSDPQL 597
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVSQEPDI 893
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-AD 380
++E LE+ DR G LA + R E + + A+++T + +IF++TD GNP +D
Sbjct: 818 SNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPLSD 877
Query: 381 PKIIEAVRQKI 391
P + E ++ I
Sbjct: 878 PALCEQLQHAI 888
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R I N + T+++V S R G L ++L + N+ + A I++ G D+F +TD
Sbjct: 810 RTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD 869
Query: 84 LNGNKLTDESVISYIEQSLET 104
+GN L+D ++ ++ ++ T
Sbjct: 870 ADGNPLSDPALCEQLQHAICT 890
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V +DN T+V+V + R G+L +VL + +++A I+++G +D F++TD
Sbjct: 788 KVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITD 847
Query: 84 LNGNKLTDESVISYIEQSL 102
++ K+TD + I++ +
Sbjct: 848 MDYKKVTDPQKLLRIKERI 866
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I L + H+ +++ +T LELT D
Sbjct: 764 ARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D R++
Sbjct: 824 RPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPLLCSRLQ 878
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNHPLS 869
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD +P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 861 TDANNHPLSDPLLCSRLQDAI 881
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIR 294
+V + N + + V C D+ L VV T+ ++ + A I T+ + + F I
Sbjct: 674 LVKISNRFSNGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDNFIIT 733
Query: 295 HIDGTPISSEPERQ----------------------RVIQCLEAAVGRR-----ASEGVR 327
++G + SE R+ R +Q R E
Sbjct: 734 ELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKKEHTE 793
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
LE+ D+ GLLA +++ F E LN+ A+++T ++A + F +T+E G
Sbjct: 794 LEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIG 760
Query: 173 DSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPTRVKQIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ I L L+ +D + +RR+ + L+H
Sbjct: 761 DNPVRVKEIRDGLAEALRNPDDYPNI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +++ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I D P+S
Sbjct: 859 FITDADNQPLS 869
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 387 VRQKI 391
++ I
Sbjct: 877 LQDAI 881
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAI 881
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 530 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 589
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D ++ R+L FA
Sbjct: 590 NNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------- 630
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 631 ---PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 687
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 688 FITDANNHPL-SDPQLCRQLQ 707
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 646 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 705
Query: 387 VRQKIGLSNLKVKELPMIYHQKGE 410
++ I VK+L + Q G+
Sbjct: 706 LQDAI------VKQLSVNSEQGGD 723
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 630 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 689
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 690 TDANNHPLSDPQLCRQLQDAI 710
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + R F E G+ + A++ T + ++F++TD NP DP + +
Sbjct: 815 LEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDAQQNPITDPDLCQQ 874
Query: 387 VRQKI 391
+ I
Sbjct: 875 IEAAI 879
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
GL+ LE+ DR GLL+ + V + + AK+ T R+ L ++ D +PI D
Sbjct: 811 GLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDAQQ-NPITDP 869
Query: 175 QQIDRIEARLRNVL 188
+IEA +R+ L
Sbjct: 870 DLCQQIEAAIRDTL 883
>gi|239908123|ref|YP_002954864.1| protein-PII uridylyltransferase [Desulfovibrio magneticus RS-1]
gi|239797989|dbj|BAH76978.1| putative protein-PII uridylyltransferase [Desulfovibrio magneticus
RS-1]
Length = 884
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N A ++V++V C DR LL+D+ TL +M A + T R FY+R
Sbjct: 793 PEVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVR 852
Query: 295 HIDGTPISSEPERQRVIQC 313
G + +PE+ I+
Sbjct: 853 GPAGRRV-EDPEQLAEIKA 870
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T ++++ DRVGLL ++ LA++ AKV T GR+ + YV+ +G +ED +
Sbjct: 805 FTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG-PAGRRVEDPE 863
Query: 176 QIDRIEARLRNVLKGD 191
Q+ I+A L + L D
Sbjct: 864 QLAEIKAALLHRLADD 879
>gi|145355046|ref|XP_001421782.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582020|gb|ABP00076.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 447
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 93 SVISYIE--QSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVW 150
S I +E + LE +H +S L L++ DRVGLL +V L +LQ +V A V
Sbjct: 124 STIPSVESFEMLEQMHANQS-----LYILQVEAHDRVGLLHDVTLALWELQLTVHRAHVT 178
Query: 151 THN-GRIASLIYVKD-----CNSGSPIEDSQQIDRIEARLRNVLKGDNDI--RSAKMTVS 202
T G+ L YV D N + S+++ + AR L N + +
Sbjct: 179 TAPCGKAVDLFYVTDDLHELPNPSRVGDISRRVKPVVARTPEALNRVNILVHPAPSFVTR 238
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
T T R M+ + + PV + T V V N +++V ++ +DR LL+
Sbjct: 239 QGRTKTLRESSGMIVTE---AKPPVFDYET---TVEVDNLMSPAHTVFQIRTRDRQGLLY 292
Query: 263 DVVCTLTDMEYVVFHATI 280
D + D++ V +A I
Sbjct: 293 DCLRVSKDLKVSVSYAKI 310
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTER-DEALNIFYVTDEMGNPADPKIIEA 386
L++ DR GLL DVT E L V RA V+T +A+++FYVTD++ +P +
Sbjct: 147 LQVEAHDRVGLLHDVTLALWELQLTVHRAHVTTAPCGKAVDLFYVTDDLHELPNPSRVGD 206
Query: 387 VRQKI 391
+ +++
Sbjct: 207 ISRRV 211
>gi|123443487|ref|YP_001007460.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259722|ref|ZP_14762421.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166232256|sp|A1JP85.1|GLND_YERE8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122090448|emb|CAL13316.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512815|gb|EKA26651.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 892
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 31/178 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V V A R + + + C DR L VV L V A I T +
Sbjct: 689 LLEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGR---------RASEGVR--------- 327
++ F + DG+P++ + +I L+ A+ R R S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
LEL D+ GLLA V F + GL++ A ++T + ++F + D+
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADK 865
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELPMIYHQKGE 410
++ I VK+L + Q G+
Sbjct: 876 LQDAI------VKQLSVNSEQGGD 893
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T ++L+ DR+G L + L DL V + V T + ++ N+G +ED
Sbjct: 89 TIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDPDM 148
Query: 177 IDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
++RI + N+LK H E Q+ + + PV + D+
Sbjct: 149 LERIRLTIISNLLK----------------YHPESS-EQLAMGEVFGIKAPVKKLDLDFA 191
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
S++ ++ DR LL +++ + D+ V A I+T G A +F++ +
Sbjct: 192 TRIQVKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVSY 251
Query: 296 IDGTPISSEPERQRVIQCL 314
G ++S Q ++ CL
Sbjct: 252 -GGAALNSS-MSQVLVNCL 268
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 83 DLN-GNKLTD------------ESVISYIEQSLETIHYGRSNSFNGL------------- 116
N G K+ D +++ Y +S E + G
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
+ L + DR GLL E+ V+AD+ V A++ T G IA
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTE-GLIA 243
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE-MGNPA-D 380
SE ++L DR G L D + ++ GL+V++ VSTE F++T G D
Sbjct: 86 SEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVED 145
Query: 381 PKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
P ++E +R I +SNL + YH ES EQ
Sbjct: 146 PDMLERIRLTI-ISNL------LKYHP--ESSEQ 170
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 201 PKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVS 250
>gi|332160590|ref|YP_004297167.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664820|gb|ADZ41464.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859596|emb|CBX69936.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica W22703]
Length = 892
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 31/178 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V V A R + + + C DR L VV L V A I T +
Sbjct: 689 LLEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGR---------RASEGVR--------- 327
++ F + DG+P++ + +I L+ A+ R R S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
LEL D+ GLLA V F + GL++ A ++T + ++F + D+
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADK 865
>gi|384427309|ref|YP_005636667.1| protein-P-II uridylyltransferase [Xanthomonas campestris pv.
raphani 756C]
gi|341936410|gb|AEL06549.1| protein-P-II uridylyltransferase [Xanthomonas campestris pv.
raphani 756C]
Length = 869
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 40/174 (22%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-----IRHIDGTP---- 300
V V DR L +V TL Y + A + A A + + DG P
Sbjct: 693 VFVYSPDRDGLFSAIVATLDRKGYGIHRARVLDAPHDAIFDVFEVLPQDSSADGDPQRLA 752
Query: 301 -----------ISSEPERQRVIQCL------------EAAVGRRASEGVRLELCMEDRQG 337
+ P R+ V + L E+A GRR R+ L DR G
Sbjct: 753 AALRQVLAGDLLKVRPSRRAVPRQLRHFRFAPRVEFSESAGGRR----TRISLVAPDRPG 808
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
LLADV R L V A ++T + A + F +TDE P + +A RQ +
Sbjct: 809 LLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRP----LPDAARQAL 858
>gi|433547816|ref|ZP_20503867.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
gi|431791242|emb|CCO66907.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
Length = 892
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 31/178 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V V A R + + + C DR L VV L V A I T +
Sbjct: 689 LLEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGR---------RASEGVR--------- 327
++ F + DG+P++ + +I L+ A+ R R S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
LEL D+ GLLA V F + GL++ A ++T + ++F + D+
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADK 865
>gi|21230840|ref|NP_636757.1| PII uridylyl-transferase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769161|ref|YP_243923.1| PII uridylyl-transferase [Xanthomonas campestris pv. campestris
str. 8004]
gi|23821653|sp|Q8PAU4.1|GLND_XANCP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81170628|sp|Q4USS0.1|GLND_XANC8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|21112444|gb|AAM40681.1| protein-PII uridylyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574493|gb|AAY49903.1| protein-PII uridylyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 869
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 40/174 (22%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-----IRHIDGTP---- 300
V V DR L +V TL Y + A + A A + + DG P
Sbjct: 693 VFVYSPDRDGLFSAIVATLDRKGYGIHRARVLDAPHDAIFDVFEVLPQDSSADGDPQRLA 752
Query: 301 -----------ISSEPERQRVIQCL------------EAAVGRRASEGVRLELCMEDRQG 337
+ P R+ V + L E+A GRR R+ L DR G
Sbjct: 753 AALRQVLAGDLLKVRPSRRAVPRQLRHFRFAPRVEFSESAGGRR----TRISLVAPDRPG 808
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
LLADV R L V A ++T + A + F +TDE P + +A RQ +
Sbjct: 809 LLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRP----LPDAARQAL 858
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
G K+T+ I+ ++ L
Sbjct: 894 TAQGEKITETRRINALKADL 913
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 319 GRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD-EALNIFYVTDEMGN 377
G+ A+E V + +DRQGL AD+ T G NV A V T R +AL++FYV D G
Sbjct: 732 GQNAAEIV---VAAKDRQGLFADLALTISSLGGNVVGARVFTSRQGQALDVFYVQDVTGA 788
Query: 378 P 378
P
Sbjct: 789 P 789
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER--Q 308
V KDR L D+ T++ + V A + T+ + L+ FY++ + G P+ E R +
Sbjct: 740 VAAKDRQGLFADLALTISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPLGCENPRALR 799
Query: 309 RVIQCLEAA-----------------------------VGRRASE-GVRLELCMEDRQGL 338
R+ LEAA V AS+ +E DR GL
Sbjct: 800 RLADALEAAGKGEPLVVEPRRGAEQARAAAFAIAPSVTVDNDASDDATVVEASGRDRPGL 859
Query: 339 LADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
L + ++ ++GL++ A + + A++ FYV G KI E R
Sbjct: 860 LHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQTAQGE----KITETRR 905
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELPMIYHQKGE 410
++ I VK+L + Q G+
Sbjct: 876 LQDAI------VKQLSVNSEQGGD 893
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVSQEPDI 893
>gi|145631865|ref|ZP_01787623.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|144982521|gb|EDJ90079.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
Length = 863
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 ------TPISSE--------PERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+ SE P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|158520584|ref|YP_001528454.1| UTP-GlnB uridylyltransferase, GlnD [Desulfococcus oleovorans Hxd3]
gi|158509410|gb|ABW66377.1| UTP-GlnB uridylyltransferase, GlnD [Desulfococcus oleovorans Hxd3]
Length = 887
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GL S++ V ++EA+++T IA ++ + I + QQ ++ + L
Sbjct: 698 DRPGLFSKIAGVFTLNSLDILEAEIYTWKNGIALDVFTVSPPADR-IYEHQQWEKAASHL 756
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
+ L GD D+ A + A TE+ FA R + V + N
Sbjct: 757 QAALSGDLDLAGA-IAARPAPLRTEK-----TFATRPHR-------------VKIDNEES 797
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSE 304
+++V V D LLF + L ++ A I T ++ FY+R ++G + +
Sbjct: 798 SFFTIVEVFAYDFPGLLFSITDILFQCGIDIWVAKIATKVDQVIDIFYVRTLEGEKVDTP 857
Query: 305 PERQRVIQCLEAAVGR 320
R+ +E + R
Sbjct: 858 EAVDRLQTMIETMLER 873
>gi|188992309|ref|YP_001904319.1| PII uridylyl-transferase [Xanthomonas campestris pv. campestris
str. B100]
gi|229487483|sp|B0RW57.1|GLND_XANCB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|167734069|emb|CAP52275.1| [Protein-PII] uridylyltransferase [Xanthomonas campestris pv.
campestris]
Length = 869
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 40/174 (22%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFY-----IRHIDGTP---- 300
V V DR L +V TL Y + A + A A + + DG P
Sbjct: 693 VFVYSPDRDGLFSAIVATLDRKGYGIHRARVLDAPHDAIFDVFEVLPQDSSADGDPQRLA 752
Query: 301 -----------ISSEPERQRVIQCL------------EAAVGRRASEGVRLELCMEDRQG 337
+ P R+ V + L E+A GRR R+ L DR G
Sbjct: 753 AALRQVLAGDLLKVRPSRRAVPRQLRHFRFAPRVEFSESAGGRR----TRISLVAPDRPG 808
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
LLADV R L V A ++T + A + F +TDE P + +A RQ +
Sbjct: 809 LLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRP----LPDAARQAL 858
>gi|113970978|ref|YP_734771.1| PII uridylyl-transferase [Shewanella sp. MR-4]
gi|113885662|gb|ABI39714.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-4]
Length = 861
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQLDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVST--ERDEALNIFYVTD 373
+EL D GLLA V F + A+++T ER E I D
Sbjct: 773 SFLESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFILQTND 832
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIR 294
+V + N + + V C D+ L VV T+ ++ + A I T+ + + F I
Sbjct: 674 LVKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIIT 733
Query: 295 HIDGTPISSEPERQ----------------------RVIQCLEAAVGRR-----ASEGVR 327
++G + SE R+ R +Q R E
Sbjct: 734 ELNGELVRSERRRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKKEHTE 793
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
LE+ D+ GLLA +++ F E LN+ A+++T ++A + F +T+E G
Sbjct: 794 LEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVSQEPDI 893
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADP----K 382
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCTR 876
Query: 383 IIEAVRQKIGLSN 395
+ +A+ +++ +SN
Sbjct: 877 LQDAIVEQLTVSN 889
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + + ++ ++
Sbjct: 861 TDANNQPLSDPLLCTRLQDAI 881
>gi|114048202|ref|YP_738752.1| PII uridylyl-transferase [Shewanella sp. MR-7]
gi|113889644|gb|ABI43695.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-7]
Length = 861
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQLDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVST--ERDEALNIFYVTD 373
+EL D GLLA V F + A+++T ER E I D
Sbjct: 773 SFLESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFILQTND 832
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER------QRVIQCLEAAVGRRASEG 325
RH DG P + R ++ L + ++ +
Sbjct: 739 LDQHGKAIDEARHKAVAKHLVHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSKKH 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA+V TF E +N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQ 858
Query: 386 AVRQKI 391
A+R+++
Sbjct: 859 ALRERL 864
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
++ IR + V IDN T++ V + + G+L E + L DL L + A I +
Sbjct: 810 RMPIRRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQ 869
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLE 103
+DVF+VT+ NG K+ + I+ L+
Sbjct: 870 VVDVFYVTERNGRKVEEARTCESIQARLQ 898
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+++ +D+QGLL ++ +T + GL+V A++ T D+ +++FYVT+ G
Sbjct: 833 IDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDVFYVTERNG 881
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +++ D+ GLL E+ L DL SV AK+ T ++ + YV + N G +E+++
Sbjct: 830 FTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDVFYVTERN-GRKVEEAR 888
Query: 176 QIDRIEARLRN 186
+ I+ARL+
Sbjct: 889 TCESIQARLQE 899
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIR 294
+V + N + V + CKDR L VV + + + + A I T+ + A+ F +
Sbjct: 687 LVKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVT 746
Query: 295 HIDGTPISSEPER---QRVIQCLEA--AVGRRASEGVRL--------------------- 328
+DG+ + + R + +I L + + SE +L
Sbjct: 747 ELDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTE 806
Query: 329 -ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
EL D+ GLLADV+ F E L++ A+++T ++A + F +T+ G + +++
Sbjct: 807 MELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALSERERQSL 866
Query: 388 RQKI 391
+K+
Sbjct: 867 SEKL 870
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 110 SNSFN-GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS++ T LE+TG DR GLLS++ ++ L ++ A V T + + YV D +G
Sbjct: 842 SNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TG 900
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ + + + I RL+N G
Sbjct: 901 QKVHNVGRQESIRDRLKNAFDG 922
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V++ N+ T+++V R G+L + ++ LNL I A++ + G +DVF+VTDL
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
G K+ + I L+ N+F+G
Sbjct: 899 TGQKVHNVGRQESIRDRLK-------NAFDG 922
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
LE+ DR GLL+D+T LN+ A V T ++A+++FYVTD G
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQ 901
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 110 SNSFN-GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS++ T LE+TG DR GLLS++ ++ L ++ A V T + + YV D +G
Sbjct: 842 SNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TG 900
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ + + + I RL+N G
Sbjct: 901 QKVHNVGRQESIRDRLKNAFDG 922
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V++ N+ T+++V R G+L + ++ LNL I A++ + G +DVF+VTDL
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
G K+ + I L+ N+F+G
Sbjct: 899 TGQKVHNVGRQESIRDRLK-------NAFDG 922
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
LE+ DR GLL+D+T LN+ A V T ++A+++FYVTD G
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQ 901
>gi|117921258|ref|YP_870450.1| PII uridylyl-transferase [Shewanella sp. ANA-3]
gi|117613590|gb|ABK49044.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. ANA-3]
Length = 861
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQLDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVST--ERDEALNIFYVTD 373
+EL D GLLA V F + A+++T ER E I D
Sbjct: 773 SFLESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFILQTND 832
>gi|120602873|ref|YP_967273.1| metal dependent phosphohydrolase [Desulfovibrio vulgaris DP4]
gi|120563102|gb|ABM28846.1| metal dependent phosphohydrolase [Desulfovibrio vulgaris DP4]
Length = 906
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 227 VLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
LR + P V V N Y+V++V DR LL+DV TL + V A ++T G
Sbjct: 811 ALREALRRPAEVRVDNGLSDFYTVIDVFAPDRPALLYDVARTLQSLHLDVLFAKVSTLGN 870
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRR 321
R F +R G ++ E V L AV R
Sbjct: 871 RTADTFSVRTAQGQKLTDEEHLAEVRAALLHAVASR 906
>gi|24373194|ref|NP_717237.1| protein-P-II uridylyltransferase GlnD [Shewanella oneidensis MR-1]
gi|30173051|sp|Q8EGH8.1|GLND_SHEON RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24347412|gb|AAN54681.1| protein-P-II uridylyltransferase GlnD [Shewanella oneidensis MR-1]
Length = 861
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 227 VLRHS-TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQVDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGEPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVST--ERDEALNIFYVTD 373
+EL D GLLA V F + A+++T ER E I D
Sbjct: 773 SFLESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLSAKITTIGERAEDFFILQTND 832
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|336450592|ref|ZP_08621039.1| (protein-PII) uridylyltransferase [Idiomarina sp. A28L]
gi|336282415|gb|EGN75647.1| (protein-PII) uridylyltransferase [Idiomarina sp. A28L]
Length = 874
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
GRF D F ++++ E L + G N+ NG T L + + L +
Sbjct: 650 GRFTADYFFRHTPEQIAWHSQNIMHVQEHQLPLVLIGDENN-NGTTELFIYHHEESHLFA 708
Query: 132 EVFAVLADLQCSVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
+V AVL Q S+ +A++ T +G + V G P+ D+Q+I+ + L +VL+
Sbjct: 709 KVAAVLDSEQLSIHDAQILNTRDGYVMDTFIVLQ-QDGLPLADAQRIEEVHQHLHDVLRK 767
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ S++ ++S RRL R++ + T + ++N ++ ++
Sbjct: 768 RRPVPSSQRSIS-------RRL-------RNF------KVRTRVKFINLKNARRTTFELI 807
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ DR L+ + ++ + A I T GE+A
Sbjct: 808 TL---DRPGLIARLAAVFQQLDINLMAAKITTVGEQA 841
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 47/209 (22%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N D +V+ V+ ++ L D V L ++ + ATI+ FYI
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATISDGST----VFYIT 122
Query: 295 HID-----------------------------------GTPISSEPE-----RQRVIQCL 314
D G+ SEP R+RV+Q
Sbjct: 123 DADTSEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTT 182
Query: 315 EAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVT-- 372
+ L + DR GLL D+ R ++ LNV AE+ TE A + F++T
Sbjct: 183 IDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFITYH 242
Query: 373 -DEMGNPADPKIIEAVRQKIGLSNLKVKE 400
+ + +P + A++ + L L E
Sbjct: 243 GEPLNSPMVTLVTNALQYYLSLGELSSNE 271
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 40/162 (24%)
Query: 26 VIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLN 85
+ID AT+V++ R G LL+ ++ L DL L + K +S+D FH+ L
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 86 GNKLTD------------ESVISYIEQSLETIHYGRSNSFNGLTALE------------- 120
G K+ D +++ Y +S E + G F G+ A E
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKAPENKIDVEVATHVIV 116
Query: 121 -----------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ DR GLL EV ++ D+ C V A++ T
Sbjct: 117 EDDGPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDT 158
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
K+ + + T +V D+ P +++ +++A R G+LLE ++++TD+N ++ A I ++G
Sbjct: 105 KIDVEVATHVIVEDDG--PKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLV 162
Query: 75 FMDVFHVTDLNGNKL 89
D FHV+ G KL
Sbjct: 163 AKDKFHVS-YRGAKL 176
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|238763982|ref|ZP_04624938.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697799|gb|EEP90560.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
Length = 892
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 31/177 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V V A R + + + C DR L VV L V A I T +
Sbjct: 689 LLEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGR---------RASEGVR--------- 327
++ F + DG+P++ + +I L+ A+ R R S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRISPKLRHFSVPTETN 807
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
LEL D+ GLLA V F + GL++ A ++T + ++F + D
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|389706449|ref|ZP_10186462.1| uridylyltransferase [Acinetobacter sp. HA]
gi|388610584|gb|EIM39701.1| uridylyltransferase [Acinetobacter sp. HA]
Length = 890
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 227 VLRHSTDY-PVVTVQNWADRSYSVVNVQ----CKDRTKLLFDVVCTLTDMEYVVFHATIN 281
+L+H + P+V ++ R Y+ VQ +D+ L V L M+ V A I
Sbjct: 675 ILQHGDNSEPLVLMR--PHRKYAQDAVQIFIYTQDKPNLFATTVAVLDRMDLDVQDARII 732
Query: 282 TAGERAYLEFYIRHIDGTPISSEPERQ-RVIQCLEAAVG----------RRASEGVR--- 327
TA + L+ Y+ + ++PER+ +VI L+ A+ RR +R
Sbjct: 733 TATKAFSLDTYVVLDRFGTLLTDPERELKVIDALKDALSHSDKYPGLMQRRIPRQLRHFD 792
Query: 328 -----------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
+E+ D+ GLLA V F GL++ A+++T + A +IF+
Sbjct: 793 IENTVDISLNPVLNQNMVEIATLDQPGLLAKVGGLFMMRGLDIHSAKIATLGERAEDIFF 852
Query: 371 VTDEMGNPADPK 382
VT + G P +P+
Sbjct: 853 VTKKDGMPLNPE 864
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + +L V + P
Sbjct: 877 LQEAI-VQHLSVNQEP 891
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 861 TDAHNQPLSDPQLCSRLQEAI 881
>gi|46579644|ref|YP_010452.1| protein-P-II uridylyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152998|ref|YP_005701934.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris RCH1]
gi|46449059|gb|AAS95711.1| protein-P-II uridylyltransferase, putative [Desulfovibrio vulgaris
str. Hildenborough]
gi|311233442|gb|ADP86296.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris RCH1]
Length = 906
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 227 VLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
LR + P V V N Y+V++V DR LL+DV TL + V A ++T G
Sbjct: 811 ALREALRRPAEVRVDNGLSDFYTVIDVFAPDRPALLYDVARTLQSLHLDVLFAKVSTLGN 870
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRR 321
R F +R G ++ E V L AV R
Sbjct: 871 RTADTFSVRTAQGQKLTDEEHLAEVRAALLHAVASR 906
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI- 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNDGETIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ +++RI L L+ +D + +RR+ + L+H
Sbjct: 761 NNPARVERIRKGLTEALRNPDDYPNI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
++ + P+S
Sbjct: 859 FVTDENNQPLS 869
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F+VTDE P +DP++
Sbjct: 817 LELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDENNQPLSDPQLCMR 876
Query: 387 VRQKI 391
+++ I
Sbjct: 877 LQEAI 881
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + +++++
Sbjct: 862 DENNQPLSDPQLCMRLQEAI 881
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|381171132|ref|ZP_09880281.1| protein-P-II uridylyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688356|emb|CCG36768.1| protein-P-II uridylyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|325913962|ref|ZP_08176318.1| (protein-PII) uridylyltransferase [Xanthomonas vesicatoria ATCC
35937]
gi|325539731|gb|EGD11371.1| (protein-PII) uridylyltransferase [Xanthomonas vesicatoria ATCC
35937]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|289706223|ref|ZP_06502586.1| GTP diphosphokinase [Micrococcus luteus SK58]
gi|289557062|gb|EFD50390.1| GTP diphosphokinase [Micrococcus luteus SK58]
Length = 759
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
T ++ EPER+ + A R V +++ DR+ LL+DVTR EN +N+ A
Sbjct: 661 ATLLAQEPERRTPVSW---APSRDTVYLVEIQIEALDRKSLLSDVTRVLSENHVNILSAS 717
Query: 358 VSTERDE-ALNIFYVTDEMGNPAD-PKIIEAVRQKIGLSNL 396
V+T RD A++ F EMG+P +I+AVR+ G+ ++
Sbjct: 718 VNTTRDRVAMSRFVF--EMGDPRFLGHVIDAVRRIDGVFDV 756
>gi|294665424|ref|ZP_06730711.1| PII uridylyl-transferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292604792|gb|EFF48156.1| PII uridylyl-transferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|78047042|ref|YP_363217.1| PII uridylyl-transferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325928399|ref|ZP_08189593.1| (protein-PII) uridylyltransferase [Xanthomonas perforans 91-118]
gi|346724331|ref|YP_004851000.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. citrumelo F1]
gi|91206760|sp|Q3BVJ6.1|GLND_XANC5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|78035472|emb|CAJ23117.1| [protein-PII] uridylyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325541231|gb|EGD12779.1| (protein-PII) uridylyltransferase [Xanthomonas perforans 91-118]
gi|346649078|gb|AEO41702.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|390989423|ref|ZP_10259721.1| protein-P-II uridylyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555927|emb|CCF66696.1| protein-P-II uridylyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSSG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ +++ I L L+ +D T +RR+ + L+H
Sbjct: 760 DNPERVQEIRNGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNHPLS 868
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
>gi|294624541|ref|ZP_06703218.1| PII uridylyl-transferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601147|gb|EFF45207.1| PII uridylyl-transferase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 869
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
N RVV+DN T+V+V S G L Q L D + I +A+I+++ +DVF+
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 81 VTDLNGNKLTDESVI 95
V D K+ + + I
Sbjct: 824 VLDSQQEKIVEPAFI 838
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKIIEA 386
+E+ +D G L +T+T + G+N+ RA ++TE ++ +++FYV D + +P I+
Sbjct: 781 VEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYVLDSQQEKIVEPAFIKE 840
Query: 387 VRQKI 391
+R +
Sbjct: 841 LRDGV 845
>gi|21242182|ref|NP_641764.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. citri str.
306]
gi|23821657|sp|Q8PMJ8.1|GLND_XANAC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|21107599|gb|AAM36300.1| protein-PII uridylyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 869
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|289670211|ref|ZP_06491286.1| PII uridylyl-transferase, partial [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 528
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 445 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRIQHLRVHDARIATFGERAEDQFQ 500
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 501 ITDEHDRPLSESARQALRDAL 521
>gi|269219369|ref|ZP_06163223.1| GTP diphosphokinase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211162|gb|EEZ77502.1| GTP diphosphokinase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 730
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 300 PISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVS 359
P+ EPER + E G A+ V++++ DRQGLL+D++R E+G+NV + ++
Sbjct: 623 PLKREPERFIDVAWSE---GSEATYLVQVQIEGLDRQGLLSDLSRVLSEHGINVLQGTMT 679
Query: 360 TERDEALNIFYVTDEMGNPA 379
T + E ++ T EM P+
Sbjct: 680 TTK-ERMSKLSFTFEMAEPS 698
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 759
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +++ I L L+ +D T +RR+ + L+H
Sbjct: 760 DNPERVQEIRNGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNHPLS 868
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
>gi|418521732|ref|ZP_13087774.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410702267|gb|EKQ60776.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 869
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 759
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +++ I L L+ +D T +RR+ + L+H
Sbjct: 760 DNPERVQEIRNGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNHPLS 868
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +E+ +
Sbjct: 98 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPEL 157
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 158 LEAIRLTIINNLIQYHPESSSQLALGAA-----------------FGLLPP-KEQVDVDI 199
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
T N +D S++ V+ DR LL D+V +TD+ V +T G A +F++
Sbjct: 200 ATHINISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS 259
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ +G I S+P +Q + L + R +E
Sbjct: 260 Y-NGKAI-SKPLQQVLANSLRYFLRRPTTE 287
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 91 DESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVW 150
D VI L +H + + + +T +EL+ DR+G L + L DL +VV+ V
Sbjct: 21 DSVVIKEEPVPLPIVHIDQESDPH-VTIVELSYGDRLGALLDTMKALKDLGLNVVKGSVA 79
Query: 151 THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTER 210
++ + + +G +ED + ++ I + + L + S K+ + A
Sbjct: 80 VSGKTKSNRLSITRAATGRKVEDPELLESIRLTIISNLLQYHPESSEKLAMGEA------ 133
Query: 211 RLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD 270
F + +++ V H T VT Q A S++ ++ D+ LL D+V +T
Sbjct: 134 ------FGKKPPKKIDVKTHIT----VTDQGPA---RSLLTIETADKPGLLLDIVEMITA 180
Query: 271 MEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRASE 324
V A I+T G A F++ + G ++ + ++ CL + R SE
Sbjct: 181 TSVTVESAEIDTEGLVARDRFHVSY--GGAALTKSLAEVLVNCLRFHLRRSESE 232
>gi|119774274|ref|YP_927014.1| PII uridylyl-transferase [Shewanella amazonensis SB2B]
gi|119766774|gb|ABL99344.1| (Protein-PII) uridylyltransferase [Shewanella amazonensis SB2B]
Length = 856
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 30/181 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L+H D P+V + R + + V C+D+ KL V+ L + V AT+ T+ +
Sbjct: 653 ILKHRQDEPLVLISKHTTRGGTELFVYCRDKPKLFATVMAVLDNKNINVHDATVMTSKDN 712
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR--------- 327
L+ F I DG P+ Q + + LE A+ R+ S ++
Sbjct: 713 YALDSFVILEQDGEPLMQLSRIQSIRKGLEKALASENPRPTKFRKLSRKMKPFNVPTQVS 772
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+EL D GLLA V F + + A+++T + A + F + G
Sbjct: 773 FLPGSRHGTSMMELIALDMPGLLARVGDIFYRCEITLLAAKITTIGERAEDFFVLQTNDG 832
Query: 377 N 377
Sbjct: 833 Q 833
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 759
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +++ I L L+ +D T +RR+ + L+H
Sbjct: 760 DNPERVQEIRNGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNHPLS 868
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 15/178 (8%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D +G L + A L L ++V A+V + Y+ D + I S+ ++ I +
Sbjct: 74 DVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKTLELIRMTI 133
Query: 185 -RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV---LRHSTDYPVVTVQ 240
N+L+ + A + H M DRD + P+ + + VV V
Sbjct: 134 INNMLQYHPE----------AADYLVEGQHIEMPGDRDADANPLGARVAPAVKTSVV-VD 182
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
N + S + + DR LL D+V TL D+ V A I+T G +AY Y+ + G
Sbjct: 183 NTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYVTYQGG 240
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 67/188 (35%), Gaps = 46/188 (24%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + N D +VV V D L D +L + + A ++ E +FYI
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 295 H-----------------------------------IDGTPIS--------SEPERQRVI 311
++G I + P RV
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 312 QCLEAAVGRRASEGVR---LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNI 368
++ +V + G R L + DR GLL D+ T ++ LNV AE+ T +A +I
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 369 FYVTDEMG 376
YVT + G
Sbjct: 233 VYVTYQGG 240
>gi|239917785|ref|YP_002957343.1| (p)ppGpp synthetase, RelA/SpoT family [Micrococcus luteus NCTC
2665]
gi|239838992|gb|ACS30789.1| (p)ppGpp synthetase, RelA/SpoT family [Micrococcus luteus NCTC
2665]
Length = 759
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
T ++ EPER+ + A R V +++ DR+ LL+DVTR EN +N+ A
Sbjct: 661 ATLLAQEPERRTPVSW---APSRDTVYLVEIQIEALDRKSLLSDVTRVLSENHVNILSAS 717
Query: 358 VSTERDE-ALNIFYVTDEMGNPAD-PKIIEAVRQKIGLSNL 396
V+T RD A++ F EMG+P +I+AVR+ G+ ++
Sbjct: 718 VNTTRDRVAMSRFVF--EMGDPRFLGHVIDAVRRIDGVFDV 756
>gi|418023470|ref|ZP_12662455.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS625]
gi|353537353|gb|EHC06910.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS625]
Length = 861
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPISSEPERQRVIQ 312
+I + P+ S+P+ R +Q
Sbjct: 858 FITDANNHPL-SDPQLCRQLQ 877
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 387 VRQKI 391
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
>gi|152999975|ref|YP_001365656.1| PII uridylyl-transferase [Shewanella baltica OS185]
gi|151364593|gb|ABS07593.1| metal dependent phosphohydrolase [Shewanella baltica OS185]
Length = 861
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|160874596|ref|YP_001553912.1| PII uridylyl-transferase [Shewanella baltica OS195]
gi|373948846|ref|ZP_09608807.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
gi|378707848|ref|YP_005272742.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS678]
gi|386325313|ref|YP_006021430.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|160860118|gb|ABX48652.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS195]
gi|315266837|gb|ADT93690.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS678]
gi|333819458|gb|AEG12124.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|373885446|gb|EHQ14338.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
Length = 861
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V+I N + T+V V + R G+L ++ + +LL++ A I++ G DVF +T
Sbjct: 804 QVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFITQ 863
Query: 84 LNGNKLTDESVISYIEQSLE 103
+G +TD + ++Q L+
Sbjct: 864 KDGGPVTDPDLCQRLQQRLK 883
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 40/201 (19%)
Query: 229 RHSTDYPVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
R + D P+V V+ + Y + + V D L V L + + A I T+ +
Sbjct: 684 RDNPDEPLVLVRESSGGQYEGGTQIFVYTPDTENLFAATVNALDQLNLTIMDARIITSAD 743
Query: 286 RAYLEFYI---RHIDGTPISSE-PERQRVIQCLEAAVGRRASEGVRLELCME-------- 333
L+ YI H GTPI ++ P Q + L A+ + G ++ M
Sbjct: 744 SFSLDTYIVLDEH--GTPIGNDYPRLQAIRDTLTQALRDPSQFGNIVQRRMPRRHKHFRV 801
Query: 334 ----------------------DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYV 371
DR GLLA + R F E L + A ++T + ++F++
Sbjct: 802 PTQVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFI 861
Query: 372 TDEMGNP-ADPKIIEAVRQKI 391
T + G P DP + + ++Q++
Sbjct: 862 TQKDGGPVTDPDLCQRLQQRL 882
>gi|103488264|ref|YP_617825.1| PII uridylyl-transferase [Sphingopyxis alaskensis RB2256]
gi|98978341|gb|ABF54492.1| UTP-GlnB uridylyltransferase, GlnD [Sphingopyxis alaskensis RB2256]
Length = 935
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V V N A ++V+ V +DR LL + L + V A + T GERA FY+
Sbjct: 842 PNVFVDNKASNRFTVIEVNAQDRPALLNQLAYALFQSKVTVHSAHVATYGERAVDTFYVT 901
Query: 295 HIDGTPISSEPERQRVIQ--CLEAA 317
+ G I S P R + ++ LEAA
Sbjct: 902 DLIGDKIDS-PARVKTLEKRLLEAA 925
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V +DN T+++V++ R +L + L + + A++++ G +D F+V
Sbjct: 841 APNVFVDNKASNRFTVIEVNAQDRPALLNQLAYALFQSKVTVHSAHVATYGERAVDTFYV 900
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+K+ + + +E+ L
Sbjct: 901 TDLIGDKIDSPARVKTLEKRL 921
>gi|444918465|ref|ZP_21238536.1| [Protein-PII] uridylyltransferase [Cystobacter fuscus DSM 2262]
gi|444709831|gb|ELW50829.1| [Protein-PII] uridylyltransferase [Cystobacter fuscus DSM 2262]
Length = 895
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV N A R ++VV+V +DR LL + LT + A ++T RA FY+
Sbjct: 801 PRVTVDNRASRDFTVVDVLARDRVGLLHAIASALTRSGASIALAKVSTEAHRAMDSFYVT 860
Query: 295 HIDGTPISSEPERQRVIQCLEAAV 318
+G + E ++ + AA+
Sbjct: 861 R-EGARVEGAGEEAALVDAITAAL 883
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F+VTD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V P +
Sbjct: 877 LQDAI-VEQLSVNSEPTL 893
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + AV+ L ++ +A++ T + + Y V D + S
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ +++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPKRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
++ P+S
Sbjct: 859 FVTDAQNQPLS 869
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF V
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD L+D + S ++ ++
Sbjct: 861 TDAQNQPLSDPQLCSRLQDAI 881
>gi|350561740|ref|ZP_08930578.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780772|gb|EGZ35090.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 886
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 36/194 (18%)
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA-TINTAGERAYLE 290
TD P+V V++ R + + V D +L + TLT + + A I T G R
Sbjct: 691 TDLPLVLVRHETPRGSTEIFVYTDDHPRLFARITTTLTQLGLDIVDARIITTHGGRTLDT 750
Query: 291 FYIRHIDGTPISSEPE----------RQRVI--QC---------------------LEAA 317
F + ++G + EP R+R++ +C +E +
Sbjct: 751 FLV--LEGMGHAVEPGFRVDEIRETLRERLVDPRCDHHAVQRSLPRRLKHFDVVTQIEFS 808
Query: 318 VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
G R+ + DR GLL+ + F E +NV A +ST ++ +IF + + G
Sbjct: 809 AGTPPGTSTRMRVRALDRPGLLSTIGCVFAEQNVNVRTARISTAGEQVEDIFLLFNADGR 868
Query: 378 PADPKIIEAVRQKI 391
P+ A+R+++
Sbjct: 869 ELTPEQQHALRRQL 882
>gi|217974062|ref|YP_002358813.1| PII uridylyl-transferase [Shewanella baltica OS223]
gi|217499197|gb|ACK47390.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS223]
Length = 861
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LELT D
Sbjct: 764 ARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
R GLL+ + + + S+ AK+ T R+ + ++ D N+
Sbjct: 824 RPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANN 865
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L +K A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N ++L+D + S ++ ++
Sbjct: 861 TDANNHQLSDPLLCSRLQDAI 881
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 23/182 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVF 858
Query: 292 YI 293
+I
Sbjct: 859 FI 860
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 694 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 753
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + +L V + P
Sbjct: 754 LQEAI-VRHLSVNQEP 768
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 578 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 637
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 638 DN------PARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFA------------- 678
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P+VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 679 ---PLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVF 735
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 736 FITDAHNQPLS 746
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 678 APLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 737
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 738 TDAHNQPLSDPQLCSRLQEAI 758
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ + + T +V D+ P +++ +++A R G+LLE ++++TD+N+ ++ A I ++G
Sbjct: 214 KKVDVEVATHVIVQDDG--PKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGL 271
Query: 74 FFMDVFHVTDLNGNKL 89
D FHV+ G KL
Sbjct: 272 VAKDKFHVS-YRGAKL 286
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 40/165 (24%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +++D FH+
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 83 DLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE---------- 120
L G K+ D +++ Y +S E + G F G+ A E
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKAPEKKVDVEVATH 223
Query: 121 --------------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ DR GLL EV ++ D+ V A++ T
Sbjct: 224 VIVQDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDT 268
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 VRQKI 391
+++ I
Sbjct: 876 LQEAI 880
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F+G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FDGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIRDGLTEALHNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +E+ +
Sbjct: 101 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPEL 160
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 161 LEAIRLTIINNLIQYHPESSSRLALGAA-----------------FGLLPP-KEQVDVDI 202
Query: 237 VTVQNWAD--RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
T N +D S++ V+ DR LL D+V +TD+ V +T G A +F++
Sbjct: 203 ATHINISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS 262
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASE 324
+ +G I S+P +Q + L + R +E
Sbjct: 263 Y-NGKAI-SKPLQQVLANSLRYFLRRPTTE 290
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT 90
CP +L+ V++A R G+L++ V+++TD+N+ ++ ++G FHV+ NG ++
Sbjct: 212 CPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS-YNGKAIS 269
>gi|126173686|ref|YP_001049835.1| PII uridylyl-transferase [Shewanella baltica OS155]
gi|386340444|ref|YP_006036810.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS117]
gi|125996891|gb|ABN60966.1| metal dependent phosphohydrolase [Shewanella baltica OS155]
gi|334862845|gb|AEH13316.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS117]
Length = 861
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGAPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDSPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|380513306|ref|ZP_09856713.1| PII uridylyl-transferase [Xanthomonas sacchari NCPPB 4393]
Length = 877
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 327 RLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
RL L DR GLLADV + R + L V A ++T + A ++F++TDE P
Sbjct: 799 RLGLVAPDRPGLLADVAQVLRRHHLRVHDARIATFGERAEDLFHITDEHNLP 850
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + +L V + P
Sbjct: 877 LQEAI-VRHLSVNQEP 891
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 861 TDAHNQPLSDPQLCSRLQEAI 881
>gi|344940504|ref|ZP_08779792.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
gi|344261696|gb|EGW21967.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
Length = 881
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+EL D GLL+ + R F + +++ A+++T A ++FY+TD P DP E
Sbjct: 809 IELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQPITDPATQEQ 868
Query: 387 VRQKI 391
+R++I
Sbjct: 869 IREEI 873
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V+ID AT+V++ R G L++ ++ L L+L ++K ++++G F +
Sbjct: 95 TPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFI 154
Query: 82 TDLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
T ++G K+ D +++ Y +S E + G +
Sbjct: 155 TRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIH 214
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ L + DR GLL E+ ++ D+ V A++ T
Sbjct: 215 VKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDT 257
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS 269
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 41/179 (22%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
PA LD + P V+ID AT+V+V R G L++ ++ L DL L + K
Sbjct: 68 PASLDS-------VPMPIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKG 120
Query: 67 YISSDGRFFMDVFHVTDLN-GNKLTDE------------SVISYIEQSLETIHYGRSNSF 113
+S++G F++T L+ G K+ D +++ Y +S + + G +
Sbjct: 121 TVSTEGSVKQTKFYLTRLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGI 180
Query: 114 NGL---------------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ L L DR GLL EV +LAD+ V A++ T
Sbjct: 181 QPPEKKLDVDIATHVHVKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDT 239
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 37/184 (20%)
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P S P+V + +D + ++V V DR L D + L D+ V T++T G
Sbjct: 68 PASLDSVPMPIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGS 127
Query: 286 RAYLEFYIRHID-----------------------------------GTPISSEPERQRV 310
+FY+ +D G +P +++
Sbjct: 128 VKQTKFYLTRLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL 187
Query: 311 IQCLEAAVGRRASEGVRLELCME--DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNI 368
+ V +A R L +E DR GLL +V + + ++V AE+ TE A +
Sbjct: 188 DVDIATHVHVKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDK 247
Query: 369 FYVT 372
F+V+
Sbjct: 248 FHVS 251
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE +++L D+N+ ++ A I ++G D FHV+
Sbjct: 202 PKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 251
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVT--DEMGNPAD 380
S +E+ DR G L D R ++ GL+V + VSTE FY+T D D
Sbjct: 87 SNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVED 146
Query: 381 PKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
P ++E++R I ++NL + YH ES +Q
Sbjct: 147 PDLLESIRLTI-INNL------LKYHP--ESSQQ 171
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++ DR+G L + L DL V + V T + Y+ +SG +ED
Sbjct: 90 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 149
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTV--SMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ I + N L + S ++ + + + E++L D + + D
Sbjct: 150 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL--------DVDIATHVHVKADG 201
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P S++ ++ DR LL +V+ L D+ V A I+T G A +F++
Sbjct: 202 P----------KRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 251
Query: 295 HIDGTPISSEPERQRVIQCL 314
+ G ++S Q V+ CL
Sbjct: 252 Y-GGAALNSS-LSQVVVNCL 269
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
N + T +EL TDR GLLS + L + +AK+ T R + YV D N P
Sbjct: 801 NPLSKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQNC-QP 859
Query: 171 IEDSQQIDRIEA 182
I D+Q+ R+ A
Sbjct: 860 IVDAQEQARMSA 871
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 706 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 765
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 766 LQEAI-VKQLSVNSEP 780
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 590 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 649
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 650 NNPERIQDIRDGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 687
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 688 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 747
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 748 FITDANNQPLS 758
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 690 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 749
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 750 TDANNQPLSDPQLCSQLQEAI 770
>gi|224109832|ref|XP_002315327.1| predicted protein [Populus trichocarpa]
gi|222864367|gb|EEF01498.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS-EPE 306
+V+ V C D+T L D+ + + T G+ YL F++ G P + +
Sbjct: 21 AVITVNCPDKTGLGCDLCRVILLFGLSICREDAQTDGKWCYLVFWVV---GKPNTRWDLL 77
Query: 307 RQRVIQCLEAAVGRRASEGVRLE--------------LCMEDRQGLLADVTRTFRENGLN 352
++R+++ + + + E C DR+GLL DVT E L
Sbjct: 78 KKRLLEVCPSYFSTSEFDYYKPENQQPKPPDVFLLKFWCAYDREGLLHDVTEVLWELELT 137
Query: 353 VTRAEVSTERD-EALNIFYVTD 373
+ R +VST D L++F++TD
Sbjct: 138 IKRVKVSTAPDGRVLDLFFITD 159
>gi|384253079|gb|EIE26554.1| starch phosphorylase [Coccomyxa subellipsoidea C-169]
Length = 963
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTD 83
V IDNA T+V + R G+L DL L + KA + S+GR +D F +T
Sbjct: 24 VSIDNAQDSDFTVVTISGFNRPGLLTSISGTFRDLGLDVGKAEVDGSNGRV-LDKFFITA 82
Query: 84 LNGNKLTDESVISYIEQSLETI 105
L G K+TD I + SLE +
Sbjct: 83 LGGGKVTDPKDIDKLRASLERL 104
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEAVRQKI 391
+R GLL ++ TFR+ GL+V +AEV L+ F++T G DPK I+ +R +
Sbjct: 43 NRPGLLTSISGTFRDLGLDVGKAEVDGSNGRVLDKFFITALGGGKVTDPKDIDKLRASL 101
>gi|384419966|ref|YP_005629326.1| protein-P-II uridylyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353462879|gb|AEQ97158.1| protein-P-II uridylyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 894
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 811 VEFSESADGRR----TRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQ 866
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 867 ITDEHDRPLSESARQALRDAL 887
>gi|376296756|ref|YP_005167986.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio desulfuricans
ND132]
gi|323459318|gb|EGB15183.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio desulfuricans
ND132]
Length = 866
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P+VT+ N A Y+VV V DR LFD+ TL + A I T RA F++R
Sbjct: 780 PLVTIDNRASDFYTVVEVAATDRIGFLFDMARTLAAHGLSIHLAMITTIQGRAADVFHVR 839
Query: 295 HIDG 298
DG
Sbjct: 840 TQDG 843
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+V+V + R G L + + L L I A I++ DVFHV
Sbjct: 780 PLVTIDNRASDFYTVVEVAATDRIGFLFDMARTLAAHGLSIHLAMITTIQGRAADVFHVR 839
Query: 83 DLNGNKLTDESVISYIEQSL 102
+G +L DE+ + + + L
Sbjct: 840 TQDGQRLLDETRMDTLRRDL 859
>gi|303248455|ref|ZP_07334714.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
gi|302490166|gb|EFL50085.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
Length = 886
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+T DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +Q
Sbjct: 808 TVLEVTCDDRVGLLYDIAHTLYELRLETHLAKVVTPAGRVRDVFYVRGPD-GRRVEDPEQ 866
Query: 177 IDRIEARLRNVLKGD 191
I+A L + L D
Sbjct: 867 AAEIKAALLHRLADD 881
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P V + + A Y+V+ V C DR LL+D+ TL ++ A + T R FY+R
Sbjct: 795 PEVVLDDRASDLYTVLEVTCDDRVGLLYDIAHTLYELRLETHLAKVVTPAGRVRDVFYVR 854
Query: 295 HIDGTPISSEPERQRVIQC 313
DG + +PE+ I+
Sbjct: 855 GPDGRRV-EDPEQAAEIKA 872
>gi|86739136|ref|YP_479536.1| PII uridylyl-transferase [Frankia sp. CcI3]
gi|86565998|gb|ABD09807.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Frankia sp. CcI3]
Length = 785
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEP 305
S +V+ V+ D+ +L+ +V L+ + V A + T G FY+R DG P++
Sbjct: 695 SMTVIEVRAPDQAGVLYRIVRALSGLRLDVATAIVATLGLDVVDAFYVREADGGPVADGG 754
Query: 306 ERQRVIQCLEAAVG 319
R+ + + AA+G
Sbjct: 755 RRREIADAILAALG 768
>gi|58581607|ref|YP_200623.1| PII uridylyl-transferase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|58426201|gb|AAW75238.1| protein-PII uridylyltransferase [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 894
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 811 VEFSESADGRR----TRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQ 866
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 867 ITDEHDRPLSESARQALRDAL 887
>gi|162451413|ref|YP_001613780.1| protein-PII uridylyltransferase [Sorangium cellulosum So ce56]
gi|161161995|emb|CAN93300.1| probable protein-PII uridylyltransferase [Sorangium cellulosum So
ce56]
Length = 953
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR GLL + L L S+ AK+ T R+A + YV D + G+ I + ++
Sbjct: 873 TVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDAD-GTKIANGKR 931
Query: 177 IDRIEARLRNVLKG 190
+E RL VL+G
Sbjct: 932 TQEVEERLHAVLQG 945
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPE 306
++V+ V +DR LLF + L + + A INT G R FY+ DGT I++
Sbjct: 872 HTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGTKIANGKR 931
Query: 307 RQRVIQCLEA 316
Q V + L A
Sbjct: 932 TQEVEERLHA 941
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+++V + R G+L L L L I A I+++G DVF+V+D +G K+ +
Sbjct: 873 TVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGTKIANGKRT 932
Query: 96 SYIEQSLETIHYG 108
+E+ L + G
Sbjct: 933 QEVEERLHAVLQG 945
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 321 RASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGN 377
RAS +E+ DR GLL ++ + GL+++ A+++TE ++FYV+D G
Sbjct: 868 RASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGT 924
>gi|84623532|ref|YP_450904.1| PII uridylyl-transferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|81170629|sp|Q5H1D3.2|GLND_XANOR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206761|sp|Q2P497.1|GLND_XANOM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84367472|dbj|BAE68630.1| protein-PII uridylyltransferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 869
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESADGRR----TRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|413917417|gb|AFW57349.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917418|gb|AFW57350.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 210
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|188577154|ref|YP_001914083.1| PII uridylyl-transferase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521606|gb|ACD59551.1| protein-P-II uridylyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 838
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 755 VEFSESADGRR----TRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQ 810
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 811 ITDEHDRPLSESARQALRDAL 831
>gi|260913600|ref|ZP_05920076.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632139|gb|EEX50314.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 872
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 28/152 (18%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE-FYIRHIDGTPISSEPER- 307
V V CKD+ L VV T+ ++ + A I T+ + + F + +DG + + R
Sbjct: 697 VFVYCKDQPNLFNKVVTTIGAKKFSIHDAQIITSHDGYVFDTFMVTELDGNLVKFDRRRS 756
Query: 308 --QRVIQCLEAA--------VGRRA----------------SEGVRLELCMEDRQGLLAD 341
+ + Q L++ + R+ ++ +ELC D+ GLLA
Sbjct: 757 LEKFLTQALQSTKLPKLTPLINRKLQHFSVKTEVRFLKENRTDQTEMELCALDQTGLLAK 816
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
V++ F E LN+ A+++T ++A + F +T+
Sbjct: 817 VSQVFSELKLNLLNAKITTVGEKAEDFFILTN 848
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 50/226 (22%)
Query: 6 WPACLDEYEKLVIRMNTPR-----------------VVIDNAVCPTATLVKVDSARRHGI 48
W C DEY N+P+ V I N T V V + +
Sbjct: 652 WQRCPDEY----FLRNSPKQIAWHTQLLAENETDLLVKISNRFSDGGTEVFVYCKDQPNL 707
Query: 49 LLEAVQVLTDLNLLIKKAYI--SSDGRFFMDVFHVTDLNGNKLTDE---SVISYIEQSLE 103
+ V + I A I S DG F D F VT+L+GN + + S+ ++ Q+L+
Sbjct: 708 FNKVVTTIGAKKFSIHDAQIITSHDGYVF-DTFMVTELDGNLVKFDRRRSLEKFLTQALQ 766
Query: 104 TI--------------HYGRSNSFNGL-------TALELTGTDRVGLLSEVFAVLADLQC 142
+ H+ L T +EL D+ GLL++V V ++L+
Sbjct: 767 STKLPKLTPLINRKLQHFSVKTEVRFLKENRTDQTEMELCALDQTGLLAKVSQVFSELKL 826
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+++ AK+ T G A ++ NS +Q + +E RL+ VL
Sbjct: 827 NLLNAKI-TTVGEKAEDFFIL-TNSNDHALSLEQREHLEKRLKEVL 870
>gi|384915748|ref|ZP_10015957.1| UTP:GlnB (Protein PII) uridylyltransferase [Methylacidiphilum
fumariolicum SolV]
gi|384526828|emb|CCG91828.1| UTP:GlnB (Protein PII) uridylyltransferase [Methylacidiphilum
fumariolicum SolV]
Length = 920
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 21/196 (10%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR+G+ S + + L S++ A + T N I ++ K C S +Q ++
Sbjct: 744 DRLGVFSRICGSFSVLGLSILTADIHTRNDGIVLDVF-KVCTSNKEFASKEQYKNAFCKI 802
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNWA 243
K +S + TE+ DYE ++P +T +
Sbjct: 803 LE-----------KAFISESFDITEQLAKNKTIIKEDYE--------GEFPTSITFDQDS 843
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISS 303
+ Y+++++Q D+ LL+ + L ++ + A I T A FY+ + +G I
Sbjct: 844 SKKYTILDIQTPDKPALLYRISNALLELGIEIVSARIATEKGAALDTFYVLNKNGEKIIK 903
Query: 304 EPERQRVIQCLEAAVG 319
+ E + +++ + A G
Sbjct: 904 DEEIKEILRNIRKAAG 919
>gi|386311543|ref|YP_006007599.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318606932|emb|CBY28430.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 892
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 31/178 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H + P+V V A R + + + C DR L VV L V A I T +
Sbjct: 689 LLEHDSTKPLVLVSRQATRGGTEIFICCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGR---------RASEGVR--------- 327
++ F + DG+P++ + +I L+ A+ R R S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDE 374
LEL D+ GLLA V F + GL++ A ++T + ++F + D+
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLADK 865
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 876 LQEAI-VKQLSVNSEP 890
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIRDGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
>gi|325921723|ref|ZP_08183552.1| (protein-PII) uridylyltransferase [Xanthomonas gardneri ATCC 19865]
gi|325547800|gb|EGD18825.1| (protein-PII) uridylyltransferase [Xanthomonas gardneri ATCC 19865]
Length = 869
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVANVLRLQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYG-----RSNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LELT D
Sbjct: 764 ARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D R++
Sbjct: 824 RPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPLLCSRLQ 878
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR + + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNHPLS 869
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD +P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 861 TDANNHPLSDPLLCSRLQDAI 881
>gi|114562446|ref|YP_749959.1| PII uridylyl-transferase [Shewanella frigidimarina NCIMB 400]
gi|114333739|gb|ABI71121.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 857
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 36/187 (19%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L+H D P+V + R + + V KD+ KL V+ L + V A I T+ +
Sbjct: 655 ILKHHHDEPLVLMSKHTTRGGTELFVYSKDKPKLFATVMTVLDNKNINVHDANIMTSKDN 714
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVGRRASEGVRL----------------- 328
L+ F I DG PI Q + + LE A+ ASE +L
Sbjct: 715 YALDTFVILEQDGEPIIQLSRIQSIRKALEKAL---ASENPKLPKFRKLARIMKPFNVAT 771
Query: 329 ---------------ELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
EL D GLLA V T + + A+++T + A + F + +
Sbjct: 772 HVSFLPSARHGTSMMELITLDTPGLLAKVGDTLYRCNVTLLAAKITTIGERAEDFFILQN 831
Query: 374 EMGNPAD 380
+ G D
Sbjct: 832 QSGTALD 838
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 205 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 264
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +++ I L L+ +D ++ R+L FA
Sbjct: 265 DNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------- 305
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 306 ---PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 362
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 363 FITDANNHPLS 373
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 321 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 380
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 381 LQDAI-VKQLSVNSEP 395
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 306 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 365
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + S ++ ++
Sbjct: 366 DANNHPLSDPQLCSQLQDAI 385
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 876 LQEAI-VKQLSVNSEP 890
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIRDGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
>gi|449449320|ref|XP_004142413.1| PREDICTED: uncharacterized protein LOC101203151 [Cucumis sativus]
gi|449487252|ref|XP_004157538.1| PREDICTED: uncharacterized protein LOC101230856 [Cucumis sativus]
Length = 412
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPERQ 308
V+ V C D+T L D+ + + +T G+ Y+ ++ G P + P +
Sbjct: 22 VITVNCPDKTGLGCDLCRIILLFGLSISRGDFSTDGKWCYIVLWVV---GKPTTRWPLLK 78
Query: 309 RVIQCLEAAVGRRASEGVRLE-----------------LCMEDRQGLLADVTRTFRENGL 351
+ + LE ++ G+R C +GLL DVT E L
Sbjct: 79 K--RLLEVCPSHFSTSGIRFYQQEKEIQKPPDVFLLKFWCSSHPKGLLHDVTEVLCELEL 136
Query: 352 NVTRAEVSTERD-EALNIFYVTD 373
+ R +VST D + +++F++TD
Sbjct: 137 TIRRVKVSTAPDGKMMDLFFITD 159
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 27/254 (10%)
Query: 128 GLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARL 184
GLL +V VL +L+ ++ KV T +G++ L ++ D Q+ + ++ L
Sbjct: 122 GLLHDVTEVLCELELTIRRVKVSTAPDGKMMDLFFITDTRELLHTRKRQEETMHHLKMIL 181
Query: 185 RNVLKG-DNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-PVVTVQN 241
+VL + ++ + T S + + + +F+ + P RH + VV++ N
Sbjct: 182 ADVLMSCEIELAGPEFTACSQRSPNLPSSISEELFS-LELPHGPSNRHLPSHSAVVSIDN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFYIRHID 297
RS++V+ + C D L++D++ TL D + Y FH +N+ G + +E + D
Sbjct: 241 SISRSHTVIQLLCLDHKGLMYDIMRTLKDYNIQVSYGRFH--LNSKG-KCDIELFTMQSD 297
Query: 298 GTPISSEPE--------RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLADVTR 344
G I + R + + L AAV R + L EL R + D+T
Sbjct: 298 GCKIVDPNKKNALCSRLRMELTRPLRAAVVSRGPDTELLVANPVELSGRGRPLVFHDITL 357
Query: 345 TFRENGLNVTRAEV 358
++ +++ E+
Sbjct: 358 ALKQLNMSIFSVEI 371
>gi|449134434|ref|ZP_21769935.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
gi|448887064|gb|EMB17452.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
Length = 883
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNLD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G RVG+ + + A + S++ A V T L++ + + ++ Q RIE
Sbjct: 700 GERRVGVFARITAAFSACGLSIMRANVETVG---EDLLWDQFWVNDPELKQRQPESRIEE 756
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
R V K +D S V T RR+ Q + E VL T V N
Sbjct: 757 VCRVVTKALDDPDS--------VMPTPRRVWQTQGSK---EPSSVLLLPTK---VLFDND 802
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
+++++ DR LL D+ TL+ ++ V+ A I+T ++ FY+ ++DG+PI
Sbjct: 803 TFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNLDGSPI- 861
Query: 303 SEPERQRVIQ 312
++ +RQ I+
Sbjct: 862 TDSDRQETIR 871
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 808 TDAVRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-Q 866
Query: 170 PIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 867 PLADPDLCKRLQAALVEQLSQDN 889
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKI 383
LE+ DR GLLA + F + L+V A+++T + ++FY+TD P ADP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
L+H P VT+ A R SV+ V DR LL + D + V +A I T GER
Sbjct: 795 LKHFAFAPQVTISTDAVRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERV 854
Query: 288 YLEFYIRHIDGTPIS 302
FYI P++
Sbjct: 855 EDVFYITDARNQPLA 869
>gi|289662918|ref|ZP_06484499.1| PII uridylyl-transferase [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 869
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 786 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRIQHLRVHDARIATFGERAEDQFQ 841
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P +A+R +
Sbjct: 842 ITDEHDRPLSESARQALRDAL 862
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y V D + S
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 DNPTRVKQIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 859 FITDANNQPLS 869
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADP 381
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDP 871
>gi|357151073|ref|XP_003575673.1| PREDICTED: uncharacterized protein LOC100845516 [Brachypodium
distachyon]
Length = 496
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+N RVVIDN AT+++V+ R +L A+ + LLI + + R +
Sbjct: 13 LNRLRVVIDNDASDRATVIRVEILSRLWVLTCAIN---EHGLLIHDSDLHYHSRLWHGAI 69
Query: 80 HVTDLNGNKLTDESVISYIEQSLETI---HYGRSNSF 113
VTD +GNK+ DE I+ I ++E + H R N+
Sbjct: 70 SVTDDDGNKIADERTITDIRTAIEDMERQHLTRMNAL 106
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 235 PVVTVQNWADRSY---SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE- 290
P++ ++ D + + + + + + L L + + A I ++G L+
Sbjct: 694 PLILLKESGDLQFEGATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDT 753
Query: 291 FYIRHIDGTPISSEPER------------------QRVIQCLEAAVGRRASEGVR----- 327
F++ +G PI ++PER ++QC R S R
Sbjct: 754 FFVLDSNGEPIGNDPERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFT 813
Query: 328 --------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA 379
LE+ DR GLLA + + F + + + A+++T + ++F++TD P
Sbjct: 814 DVAGGHSVLEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQPI 873
Query: 380 -DPKIIEAVRQKI 391
DP + E+++ I
Sbjct: 874 NDPALCESIQNAI 886
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G ++D +
Sbjct: 87 TVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDPEL 146
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + +A + + A R V
Sbjct: 147 LEAIRLTIINNLLQYHPESSSQLAMGIAFGVEPPKQVDVDIATR---------------V 191
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
++ DR S++ V+ DR LL D+V +TD+ V +T G A +F++ +
Sbjct: 192 KVKEDSPDR--SLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHVSY 248
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V+V R G LL+ + L +L L + KA + D + F +
Sbjct: 73 TPKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSI 132
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ I
Sbjct: 133 TKASTGRKVDDPELLEAI 150
>gi|90415791|ref|ZP_01223724.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
gi|90332165|gb|EAS47362.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
Length = 904
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 85/210 (40%), Gaps = 37/210 (17%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS--D 71
+K VI +N V I P AT + V S R L LNL I A ++S D
Sbjct: 687 QKAVILINDVGVEI-----PVATQIFVHSKDRANNFSIIASALDRLNLNIHDARLNSNSD 741
Query: 72 GRFFMDVFHVTD-------------------LNGNKLTDESVISYIEQ---------SLE 103
G F DVF+V D L+G + +Y++Q +L+
Sbjct: 742 GSAF-DVFYVLDEQDQPIGQDRLRCEKIVQTLSGAIADPSKINAYVQQRTPRQLKNFALK 800
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
T R + LE+ DR GLL+ + + + V+ AK+ T R+ + Y+
Sbjct: 801 TTAKLRHDVDANCVILEIITPDRPGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLT 860
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D N P+ DS + A +R+ L N+
Sbjct: 861 DKNF-EPLTDSDVSAALTATIRSELDQRNE 889
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 32/161 (19%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDGTPISSEPER- 307
+ V KDR + L + + A +N+ + A+ FY+ PI + R
Sbjct: 706 IFVHSKDRANNFSIIASALDRLNLNIHDARLNSNSDGSAFDVFYVLDEQDQPIGQDRLRC 765
Query: 308 QRVIQCLEAAVG----------RRASEGVR--------------------LELCMEDRQG 337
++++Q L A+ +R ++ LE+ DR G
Sbjct: 766 EKIVQTLSGAIADPSKINAYVQQRTPRQLKNFALKTTAKLRHDVDANCVILEIITPDRPG 825
Query: 338 LLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
LLA +T+ F L V A++ST + +IFY+TD+ P
Sbjct: 826 LLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLTDKNFEP 866
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G ++DS+
Sbjct: 97 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITKADTGRKVDDSEL 156
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ + + N + + SA++ + A + Q+ D + L S D P
Sbjct: 157 LEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPK-EQV-----DVDIATHLTISDDGP- 209
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
DR S++ V+ DR LL D+V +TD+ V +T G A +F++ +
Sbjct: 210 -------DR--SLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVSY 259
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ V++A R G+LL+ VQ++TD+N+ ++ ++G FHV+
Sbjct: 209 PDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS 258
>gi|254226776|ref|ZP_04920350.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
gi|125620714|gb|EAZ49074.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
Length = 881
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 121/310 (39%), Gaps = 64/310 (20%)
Query: 117 TALELTGTDRVGLLSEVF-----AVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
T EL + + LL+E+F A+ L+ V + HN ++AS + K+ S I
Sbjct: 589 TNPELWNSWKRTLLAELFYSTQRALRRGLENPVDVRERIRHNQQMASALLRKEGFSSREI 648
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
E L K D +R ++ TH +LRH
Sbjct: 649 E----------VLWQRFKADYFLRHTHKQIAWHCTH-------------------LLRHE 679
Query: 232 -TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
+ P+V + A R + V + KD+ L VV L V A I + + L+
Sbjct: 680 DSSKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLD 739
Query: 291 FY------------------IRHI-----DGTPISSEPER-QRVIQCLEAA-----VGRR 321
+ IRH+ DG P + + R R +Q + + +
Sbjct: 740 TFMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTK 799
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ + +E D GLLA V TF E L++ A+++T + A ++F +T+ G D
Sbjct: 800 SKKRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLDE 859
Query: 382 KIIEAVRQKI 391
+ + +R+K+
Sbjct: 860 EEEQHLREKL 869
>gi|153803000|ref|ZP_01957586.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
gi|124121443|gb|EAY40186.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
Length = 881
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 121/310 (39%), Gaps = 64/310 (20%)
Query: 117 TALELTGTDRVGLLSEVF-----AVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
T EL + + LL+E+F A+ L+ V + HN ++AS + K+ S I
Sbjct: 589 TNPELWNSWKRTLLAELFYSTQRALRRGLENPVDVRERIRHNQQMASALLRKEGFSSREI 648
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
E L K D +R ++ TH +LRH
Sbjct: 649 E----------VLWQRFKADYFLRHTHKQIAWHCTH-------------------LLRHE 679
Query: 232 -TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLE 290
+ P+V + A R + V + KD+ L VV L V A I + + L+
Sbjct: 680 DSSKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLD 739
Query: 291 FY------------------IRHI-----DGTPISSEPER-QRVIQCLEAA-----VGRR 321
+ IRH+ DG P + + R R +Q + + +
Sbjct: 740 TFMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTK 799
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
+ + +E D GLLA V TF E L++ A+++T + A ++F +T+ G D
Sbjct: 800 SKKRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLDE 859
Query: 382 KIIEAVRQKI 391
+ + +R+K+
Sbjct: 860 EEEQHLREKL 869
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 875
Query: 387 VRQKI 391
+++ I
Sbjct: 876 LQEAI 880
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSRLQEAI 880
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIREGLTEALHNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
>gi|125535803|gb|EAY82291.1| hypothetical protein OsI_37501 [Oryza sativa Indica Group]
Length = 239
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+ G KL
Sbjct: 140 PKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS-YRGAKL 195
>gi|74316801|ref|YP_314541.1| PII uridylyl-transferase [Thiobacillus denitrificans ATCC 25259]
gi|91206759|sp|Q3SKP1.1|GLND_THIDA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74056296|gb|AAZ96736.1| Metal dependent phosphohydrolase, HD region [Thiobacillus
denitrificans ATCC 25259]
Length = 850
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 229 RHSTDYPV-VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
RH +P V ADR V+++ C DR LLF + L E V+ A I+T GE
Sbjct: 760 RHQRHHPYPAAVHLEADRGGDGQVLSITCADRGGLLFAIAEELMRHEISVYAAKIDTLGE 819
Query: 286 RAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVG 319
R F IR G +++ PER + L +G
Sbjct: 820 RVEDTFLIR---GERLNAPPERAALENELRGVLG 850
>gi|84394416|ref|ZP_00993133.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
gi|84374949|gb|EAP91879.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
Length = 873
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISQKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER------QRVIQCLEAAVGRRASEG 325
RH DG P + R ++ L + ++ +
Sbjct: 739 LDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVEFLPTKSKKR 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA V TF E +N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQ 858
Query: 386 AVRQKI 391
A+R+++
Sbjct: 859 ALRERL 864
>gi|413950196|gb|AFW82845.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 246
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKD 164
+ KV T +GR+ L ++ D
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITD 244
>gi|254785172|ref|YP_003072600.1| PII uridylyl-transferase [Teredinibacter turnerae T7901]
gi|237686077|gb|ACR13341.1| protein-P-II uridylyltransferase [Teredinibacter turnerae T7901]
Length = 905
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LE+ DR GLLA + + F E+ + + A++ST + ++F++TD P DP++ A
Sbjct: 827 LEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFITDADNQPLGDPRLCRA 886
Query: 387 VRQKI 391
++ I
Sbjct: 887 LQDDI 891
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 17 VIRMNTPRVV----------IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
V+R TPRV+ I N + T+++V S R G+L QV + ++ ++ A
Sbjct: 796 VVRRRTPRVLKQFSVPTRTSISNDIVSGNTVLEVISPDRPGLLATIGQVFMEHDVQLQNA 855
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTD 91
IS+ G DVF +TD + L D
Sbjct: 856 KISTLGERVEDVFFITDADNQPLGD 880
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 876 LQEAI-VKQLSVNSEP 890
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIRDGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSLLQEAI 880
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 387 VRQKIGLSNLKVKELP 402
+++ I + L V P
Sbjct: 876 LQEAI-VKQLSVNSEP 890
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 760 NNPERIQDIRDGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNQPLS 868
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSLLQEAI 880
>gi|378697957|ref|YP_005179915.1| uridylyltransferase [Haemophilus influenzae 10810]
gi|301170473|emb|CBW30080.1| uridylyltransferase [Haemophilus influenzae 10810]
Length = 863
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I ++G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRE 748
Query: 299 ------TPISSE--------PERQR---VIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+ SE P RQ +Q + E +EL D+ GLLA
Sbjct: 749 LEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T+ G D + E +R
Sbjct: 809 VSQIFTELNLNLLNAKITTVGEKAEDFFILTNRFGQALDSQQREILR 855
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE-RAYLEFYIRHIDG---------- 298
V + C+D+ L VV T+ ++ + A I T + + F I +G
Sbjct: 689 VFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITEFNGELVEFDRRRE 748
Query: 299 --------------TPISSEPERQ---RVIQCLEAAVGRRASEGVRLELCMEDRQGLLAD 341
+S P RQ +Q + E +EL D+ G+LA
Sbjct: 749 LEQALTVSLQSEKLPALSITPNRQLQHFTVQTDVRFLHENKKEHTEMELVALDKPGVLAQ 808
Query: 342 VTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVR 388
V++ F E LN+ A+++T ++A + F +T++ G D + E +R
Sbjct: 809 VSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
>gi|32472257|ref|NP_865251.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|417301637|ref|ZP_12088784.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|440715491|ref|ZP_20896036.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
gi|32443493|emb|CAD72935.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|327542055|gb|EGF28552.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|436439516|gb|ELP32943.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
Length = 883
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G RVG+ + + A + S++ A V T L++ + + ++ Q RIE
Sbjct: 700 GERRVGVFARITAAFSACGLSIMRANVETVG---EDLLWDQFWVNDPELKQRQPESRIEE 756
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
R V K +D S V T RR+ Q A E VL T V N
Sbjct: 757 VCRVVTKALDDPDS--------VMPTPRRVWQTQGAK---EPSSVLLLPTK---VLFDND 802
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
+++++ DR LL D+ TL+ ++ V+ A I+T ++ FY+ + DG+PI
Sbjct: 803 TFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPDGSPI- 861
Query: 303 SEPERQRVIQ 312
++ +RQ I+
Sbjct: 862 TDSDRQETIR 871
>gi|418515727|ref|ZP_13081906.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|410707636|gb|EKQ66087.1| PII uridylyl-transferase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 874
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
++ E+A GRR R+ L DR GLLADV R L V A ++T + A + F
Sbjct: 791 VEFSESAGGRR----TRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQ 846
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P A+R +
Sbjct: 847 ITDEHDRPLSESARHALRDAL 867
>gi|198283171|ref|YP_002219492.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665343|ref|YP_002425399.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|415964209|ref|ZP_11557954.1| protein-P-II uridylyltransferase [Acidithiobacillus sp. GGI-221]
gi|198247692|gb|ACH83285.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517556|gb|ACK78142.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339832977|gb|EGQ60855.1| protein-P-II uridylyltransferase [Acidithiobacillus sp. GGI-221]
Length = 862
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
G DR GL ++ L ++++A++ T +GR V D NS + +Q +
Sbjct: 683 GPDRPGLFQQITGALDRQSLNIIDARIDTSEDGRAIDTFLVID-NSHAFAHSAQAHADLA 741
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
A LR VL+G+ +R + + H + R R + +P + V N
Sbjct: 742 AELRAVLEGEA-VRKPRF----GLRHCDPR-------HRFFAHVPA--------EIRVDN 781
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI 293
Y+++ V+ D LL+ V TL ++ + A ++T GER F+I
Sbjct: 782 GVLPRYTLLEVRAADHLGLLYQVGETLRALQLNIHGAKVSTFGERVEDTFFI 833
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ +DN V P TL++V +A G+L + + L L L I A +S+ G D F + +
Sbjct: 777 IRVDNGVLPRYTLLEVRAADHLGLLYQVGETLRALQLNIHGAKVSTFGERVEDTFFILNE 836
Query: 85 NGNKLTDESVISYIE 99
G KLT+ V + I
Sbjct: 837 RGRKLTETQVGALIH 851
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+
Sbjct: 199 PKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS 248
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V+ID AT+V++ R G L++ ++ L L+L ++K ++++G F +
Sbjct: 74 TPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFI 133
Query: 82 TDLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
T ++G K+ D +++ Y +S E + G +
Sbjct: 134 TRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIH 193
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ L + DR GLL E+ ++ D+ V A++ T
Sbjct: 194 VKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDT 236
>gi|311744097|ref|ZP_07717903.1| protein-pII uridylyltransferase [Aeromicrobium marinum DSM 15272]
gi|311313227|gb|EFQ83138.1| protein-pII uridylyltransferase [Aeromicrobium marinum DSM 15272]
Length = 738
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
DR+GL+ V RT G ++ A +ST EA ++FYV DE G+ P E +R I
Sbjct: 676 DRRGLIWQVCRTIAGLGHSIRSAHISTYGSEARDVFYVVDETGHELGPGPAEDLRAAI 733
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + TAT++ V + R G++ + + + L I+ A+IS+ G DVF+V
Sbjct: 655 PRVRLLVRARATATMIDVRATDRRGLIWQVCRTIAGLGHSIRSAHISTYGSEARDVFYVV 714
Query: 83 DLNGNKL 89
D G++L
Sbjct: 715 DETGHEL 721
>gi|421611743|ref|ZP_16052875.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
gi|408497456|gb|EKK01983.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
Length = 883
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G RVG+ + + A + S++ A V T L++ + + ++ Q RIE
Sbjct: 700 GERRVGVFARITAAFSACGLSIMRANVETVG---EDLLWDQFWVNDPELKQRQPESRIEE 756
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
R V K +D S V T RR+ Q A E VL T V N
Sbjct: 757 VCRVVTKALDDPDS--------VMPTPRRVWQTQGAK---EPSSVLLLPTK---VLFDND 802
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPIS 302
+++++ DR LL D+ TL+ ++ V+ A I+T ++ FY+ + DG+PI
Sbjct: 803 TFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPDGSPI- 861
Query: 303 SEPERQRVIQ 312
++ +RQ I+
Sbjct: 862 TDSDRQETIR 871
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
L +E+ DR GL++++ A L +++ SV +A V N +A + + G I+D Q
Sbjct: 720 LVTIEVISYDRTGLMADILAALTEMKLSVSKANVKVENNGMAVM------HLGIQIKDLQ 773
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
Q+D I ++R + KG H+ RR+H M
Sbjct: 774 QLDYIMTKIRRI-KG---------------VHSVRRMHSM 797
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA V + F E L++ A+++T + ++F++TD P +DP++
Sbjct: 240 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 299
Query: 387 VRQKI 391
+++ I
Sbjct: 300 LQEAI 304
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 124 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIG 183
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L +D T +RR+ + L+H
Sbjct: 184 NNPERIQDIREGLTEALHNPDDY----------PTIIKRRVPRQ------------LKHF 221
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL V + + + +A I T GER F
Sbjct: 222 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVF 281
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 282 FITDANNQPLS 292
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 225 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 284
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + S +++++
Sbjct: 285 DANNQPLSDPQLCSRLQEAI 304
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N +L+D + S ++ ++
Sbjct: 862 DANNQQLSDPQLCSRLQDAI 881
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ Q++ +I L L+ +D T +RR+ + L+H
Sbjct: 761 NNPQRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 799 AFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YI 293
+I
Sbjct: 859 FI 860
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL+ DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 805 TIH---NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 164 DCNSGSPIEDSQQIDRIE 181
D N+ + D Q R++
Sbjct: 862 DANNQQ-LSDPQLCSRLQ 878
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSR 876
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 877 LQDAI-VEQLSVSHEP 891
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+ G KL
Sbjct: 198 PKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS-YRGAKL 253
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 40/165 (24%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +S++ FH+
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 83 DLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE---------- 120
+G K+ D +++ Y +S E + G F G+ A E
Sbjct: 135 -RSGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGE---FFGIKAPEKKVDVDVVTH 190
Query: 121 --------------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ DR GLL E+ ++ D+ V A++ T
Sbjct: 191 VIVEDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDT 235
>gi|374854463|dbj|BAL57344.1| protein-P-II uridylyltransferase [uncultured gamma proteobacterium]
Length = 859
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL--EFY 292
P+V ++ R + V V +DR + L + V A + T + Y+ F
Sbjct: 666 PLVLLRPQNRRGSAEVFVYMRDRDAIFAQTAALLEQLGLTVLAARLETTQD-GYVVNSFL 724
Query: 293 IRHIDGTPISSEPERQRVI----QCLE------AAVGRRASEGVR--------------- 327
+ DG PI + +++ +CL+ A+ RR + +R
Sbjct: 725 VLERDGQPILDLSRQYQIVTRLQRCLKDPRPSCFAIERRPNRRLRHFSIPTQVHFYPDAK 784
Query: 328 -----LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP 378
LEL DR GLLA V F L + A ++T + A +IF++TD G P
Sbjct: 785 HGRTMLELIAADRPGLLARVGEVFERFRLRLHEARIATLGNRAEDIFFLTDCQGQP 840
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V+V R G L++ ++ L DL L + K +S++G F++T
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 83 DLN-GNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
L+ G K+ D +++ Y +S + + G +
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ L L DR GLL EV +LAD+ V A++ T
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDT 243
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE +++L D+N+ ++ A I ++G D FHV+
Sbjct: 206 PKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 255
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVT--DEMGNPAD 380
S +E+ DR G L D R ++ GL+V + VSTE FY+T D D
Sbjct: 91 SNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVED 150
Query: 381 PKIIEAVRQKIGLSNLKVKELPMIYHQKGESEEQ 414
P ++E++R I ++NL + YH ES +Q
Sbjct: 151 PDLLESIRLTI-INNL------LKYHP--ESSQQ 175
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++ DR+G L + L DL V + V T + Y+ +SG +ED
Sbjct: 94 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 153
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTV--SMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ I + N L + S ++ + + + E++L D + + D
Sbjct: 154 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL--------DVDIATHVHVKADG 205
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P S++ ++ DR LL +V+ L D+ V A I+T G A +F++
Sbjct: 206 P----------KRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 255
Query: 295 HIDGTPISSEPERQRVIQCL 314
+ G ++S Q V+ CL
Sbjct: 256 Y-GGAALNSS-LSQVVVNCL 273
>gi|350553297|ref|ZP_08922477.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
gi|349791172|gb|EGZ45062.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
Length = 898
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER 307
+V+N+ DR LL + LT V++A I TAGE+ FYI ++G PI+ + ++
Sbjct: 825 TVLNITTVDRPGLLSCIGIALTQCGVKVYNAKIATAGEQVDDVFYITDLEGRPITDKKQK 884
Query: 308 QRVIQCLEAAVG 319
+ L ++G
Sbjct: 885 SMITHTLRKSLG 896
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 876 LQDAI-VKQLSVNSEP 890
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 759
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ ++ I L L+ +D T +RR+ + L+H
Sbjct: 760 DNPERAQEIRNGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 797
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 798 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVF 857
Query: 292 YIRHIDGTPIS 302
+I + P+S
Sbjct: 858 FITDANNHPLS 868
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
>gi|336310906|ref|ZP_08565875.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
gi|335865586|gb|EGM70602.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
Length = 860
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+L+H D P+V V R + + V C+DR KL V+ L + V A I T+ +
Sbjct: 653 ILKHKQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKD 712
Query: 286 RAYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR-------- 327
L+ F I DG P+S Q + + LE A+ R+ S ++
Sbjct: 713 NYALDTFVILEQDGEPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQV 772
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D GLLA V F + A+++T + A + F +
Sbjct: 773 SFLESSRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND 832
Query: 376 G 376
G
Sbjct: 833 G 833
>gi|294085165|ref|YP_003551925.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664740|gb|ADE39841.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 972
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ N + T ++++V+ G L + + + L L I+ + IS+ G +DVF+V
Sbjct: 872 PRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQSSSISTYGERVVDVFYVK 931
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G ++ +E +I +L
Sbjct: 932 DIFGLQILNERRQQHIRNAL 951
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 100 QSLETIHYGRSNSFNGLTALELT--GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRI 156
Q LET + G A E+T D GL S + +A + ++ A++ T +G +
Sbjct: 754 QKLETPLLIDLSPDQGRRATEMTVITVDDPGLFSRIAGAVAAVGVNIASARITTCSDGTV 813
Query: 157 ASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM 216
+ Y++ ++ ++D+ + RI + G I A +S T +R+
Sbjct: 814 LDVFYLQTIDN-QVVDDAALLTRIRDFVTKAAVGKMRIADA---LSARWQQTPKRI---- 865
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
R PV P V + N +++SV+ V +D L + + + +
Sbjct: 866 ------RRFPV------PPRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQ 913
Query: 277 HATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAV 318
++I+T GER FY++ I G I +E +Q + L A +
Sbjct: 914 SSSISTYGERVVDVFYVKDIFGLQILNERRQQHIRNALLAVL 955
>gi|338534399|ref|YP_004667733.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
gi|337260495|gb|AEI66655.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
Length = 740
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEV-STERDEALNIFYVT 372
V L + DR GLLAD+T TF + G+N+++A +T D A+N F VT
Sbjct: 667 VTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRAVNTFEVT 714
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPK 382
E +EL D+ GLLA V++ F E LN+ A+++T ++A + F +T++ G D +
Sbjct: 84 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQ 143
Query: 383 IIEAVR 388
E +R
Sbjct: 144 QREILR 149
>gi|53805193|ref|YP_113084.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
gi|81170623|sp|Q60BB2.1|GLND_METCA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53758954|gb|AAU93245.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
Length = 877
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LEL DR GLL+ V + F G+ + A++ST A +IF++TD P D + A
Sbjct: 806 LELIATDRPGLLSKVGQAFMRTGIRLHNAKISTVGSRAEDIFFITDREDRPLDGEADRAA 865
Query: 388 RQKI 391
+++
Sbjct: 866 LRRV 869
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 80 HVTDL-NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
H TD N L+D+ +E ET S F L +E+ DR GL++++ AVL
Sbjct: 682 HRTDCPNAINLSDKDRTIEVEWEQET-----SGMF--LVTIEVIAYDRTGLMADILAVLM 734
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
+L+ SV A V N +A + N G I+D QQ++ I ++R +
Sbjct: 735 ELKLSVSTANVKVENTGMAGM------NLGIQIKDLQQLEFIMTKIRRI 777
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDVFH 80
P +++ T + V + + + V L NL + A I S DG + +D F
Sbjct: 679 PLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKDG-YVLDTFM 737
Query: 81 VTDLNGNKLTDESVISYIEQSLETIHYGRSNSF-------------------------NG 115
V D NG+ + +ES S I+ L ++ G N N
Sbjct: 738 VLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVDFLPTKSNK 797
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +E D GLL+ V A ADL ++ AK+ T G A +++ + G + + +
Sbjct: 798 RTLMEFVALDTPGLLATVGATFADLNINLHGAKI-TTIGERAEDLFILTGSQGGKLSEEE 856
Query: 176 QIDRIEARLRNV 187
+ E ++NV
Sbjct: 857 ECTLREILIKNV 868
>gi|413917416|gb|AFW57348.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 165
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|238009308|gb|ACR35689.1| unknown [Zea mays]
Length = 155
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|302558147|ref|ZP_07310489.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475765|gb|EFL38858.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 823
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV A R +V+ V+ +D LLF + L D V A ++T G A FY+
Sbjct: 739 PRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVT 798
Query: 295 HIDGTPISSE 304
G P+ E
Sbjct: 799 QEQGVPLPGE 808
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D + ++ A++S+ G +D F+VT
Sbjct: 739 PRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVT 798
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
G L E ++ + ET+
Sbjct: 799 QEQGVPLPGEEAVAVARKLEETL 821
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ +D GLL + R + G+ V A VST A++ FYVT E G P + AV
Sbjct: 754 IEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVTQEQGVPLPGEEAVAV 813
Query: 388 RQKI 391
+K+
Sbjct: 814 ARKL 817
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 42.4 bits (98), Expect = 0.47, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + + F E L++ A+++T + ++F++TD +P +DP++
Sbjct: 36 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 95
Query: 387 VRQKIGLSNLKVKELP 402
++ I + L V P
Sbjct: 96 LQDAI-VKQLSVNSEP 110
Score = 40.4 bits (93), Expect = 2.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 21 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 80
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + S ++ ++
Sbjct: 81 DANNHPLSDPQLCSQLQDAI 100
Score = 38.1 bits (87), Expect = 9.3, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 24 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 80
Query: 164 DCNSGSPIEDSQQIDRIE 181
D N+ P+ D Q +++
Sbjct: 81 DANN-HPLSDPQLCSQLQ 97
>gi|114321016|ref|YP_742699.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227410|gb|ABI57209.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
Length = 894
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 65/269 (24%)
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+PI+ + I+ +A+ R L+ + M V RRL AD DY
Sbjct: 627 GNPIDKRELINETQAQSRRRLR-------QRGLHHMTVRAIWRRL-----AD-DY----F 669
Query: 228 LRHST----------------DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
LRHS D P+V V+ R + + + +D + V TL +
Sbjct: 670 LRHSAEEIAWHTEAIAAARPEDLPIVLVKQRGPRGGTELFIYARDNRYVFARTVSTLDRL 729
Query: 272 EYVVFHATINTAGERAYLEFYIRHID-GTPISSEPERQRVIQCLEAAVG----------- 319
+ A I T + L+ Y+ D G P++ E + +++ L ++
Sbjct: 730 GLNIQDARIITTDQGYTLDSYLVLEDNGEPVTDEGRCREMVERLRTSLADAHRPPDLAEH 789
Query: 320 ---RR------------ASEGVR----LELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
RR +++G LEL DR GLLA V + F + + + A+++T
Sbjct: 790 RLPRRLKHFSTPTQINFSTDGPNQRTVLELITGDRPGLLAQVGQAFSQCRVKLKNAKIAT 849
Query: 361 ERDEALNIFYVTDEMGNP-ADPKIIEAVR 388
+ A ++F++TD+ P ADP +R
Sbjct: 850 IGERAEDVFFITDDQDEPLADPVQFRCLR 878
>gi|406833391|ref|ZP_11092985.1| protein-P-II uridylyltransferase [Schlesneria paludicola DSM 18645]
Length = 915
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+++ DR GLL +TRT E L+V A+++T D+ L++F+VT+ G
Sbjct: 836 IDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTESDG 884
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
G ++ VL+ + +++ A ++T +G I + V+D + I + ++D + +R
Sbjct: 731 GCFHKLSGVLSAKRMAILSAAIFTTLDGVIIDVYRVRDADHAGEIP-TWRVDEVAIAIRK 789
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNWADR 245
VL+G+ ++ + + H PV +D P+ V V N +
Sbjct: 790 VLRGETNVETLLKSRGRFSVHATS--------------GPV----SDLPMRVVVDNESSD 831
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDG 298
Y+V++V DR LL+ + TL + V A I T ++ F++ DG
Sbjct: 832 RYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTESDG 884
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 760
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 761 DN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------- 801
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
P VT+ N A R +V+ + DR LL + + + + +A I T GER F
Sbjct: 802 ---PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVF 858
Query: 292 YIRHIDGTPIS 302
+I P+S
Sbjct: 859 FITDAHNQPLS 869
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
LEL DR GLLA + F E L++ A+++T + ++F++TD P +DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 VRQKIGLSNLKVKELPMI 404
++ I + L V + P I
Sbjct: 877 LQDAI-VEQLSVNQEPDI 893
>gi|449484539|ref|XP_004156910.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase 1-like
[Cucumis sativus]
Length = 954
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + +DN+ +T + + R G+L +V L L I KA + +G +F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 83 DLNGNKLTDESVISYIEQSL 102
D +GNK+ + I I+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|148555679|ref|YP_001263261.1| metal dependent phosphohydrolase [Sphingomonas wittichii RW1]
gi|148500869|gb|ABQ69123.1| metal dependent phosphohydrolase [Sphingomonas wittichii RW1]
Length = 439
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + + SV++A++ T +G + V+D G P E
Sbjct: 247 GATLVSIYAGDHPGLFYRIAGAIHLAGASVIDARIHTTRDGMAIDNLLVQDP-FGQPFE- 304
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
GD+ +R + + A+ + R +++ P+ R D
Sbjct: 305 ----------------GDDRMRRLSVAIEDALANRSRMADKLLAK-------PLARPRAD 341
Query: 234 Y----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P + N A Y+V+ V +DR LL+ + L + ++ A I T GERA
Sbjct: 342 AFSIEPAALIDNRASNRYTVIEVNARDRPALLYALAHALFQAKVMIHSAHIATYGERAVD 401
Query: 290 EFYIRHIDGTPISS 303
FY+ + G I+S
Sbjct: 402 VFYVADLTGDKITS 415
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +IDN T+++V++ R +L L ++I A+I++ G +DVF+V
Sbjct: 347 PAALIDNRASNRYTVIEVNARDRPALLYALAHALFQAKVMIHSAHIATYGERAVDVFYVA 406
Query: 83 DLNGNKLTDESVISYIEQ 100
DL G+K+T + + +E+
Sbjct: 407 DLTGDKITSAARLKTLER 424
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D +L ++ A++S+ G +D F+VT
Sbjct: 732 PRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVT 791
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
+G L + S + ET+
Sbjct: 792 GTDGAPLPGDEAASVARKLEETL 814
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV A R +V+ V+ +D LL + L D V A ++T G A FY+
Sbjct: 732 PRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVT 791
Query: 295 HIDGTPISSEPERQRVIQCLE 315
DG P+ + E V + LE
Sbjct: 792 GTDGAPLPGD-EAASVARKLE 811
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
I PRV + A AT+++V + G+L Q L L ++ A++S+ G +D
Sbjct: 760 ITAPPPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVD 819
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL 102
F+VTD G L +E V +E++L
Sbjct: 820 AFYVTDAGGRPLGEEEAARVAKGVEEAL 847
>gi|449457765|ref|XP_004146618.1| PREDICTED: glycogen phosphorylase 1-like [Cucumis sativus]
Length = 954
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + +DN+ +T + + R G+L +V L L I KA + +G +F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 83 DLNGNKLTDESVISYIEQSL 102
D +GNK+ + I I+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 38/166 (22%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID P AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 83 DLN-GNKLTDESVISYIEQSL------------------ET-----------------IH 106
+ G K+ D ++ I ++ ET IH
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
L +E DR GL+ E+ V+AD+ V A++ T
Sbjct: 215 VKEDGPKRSLLVIET--ADRPGLVVEMIKVMADVNIDVESAEIDTE 258
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+++E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVS 269
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 38/166 (22%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID P AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 83 DLN-GNKLTDESVISYIEQSL------------------ET-----------------IH 106
+ G K+ D ++ I ++ ET IH
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
L +E DR GL+ E+ V+AD+ V A++ T
Sbjct: 215 VKEDGPKRSLLVIET--ADRPGLVVEMIKVMADVNIDVESAEIDTE 258
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+++E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVS 269
>gi|86146892|ref|ZP_01065211.1| PII uridylyl-transferase [Vibrio sp. MED222]
gi|85835344|gb|EAQ53483.1| PII uridylyl-transferase [Vibrio sp. MED222]
Length = 873
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER-QRVIQCLEAA-----VGRRASEG 325
RH DG P + R R +Q + + ++ +
Sbjct: 739 LDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVEFLPTKSKKR 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA V TF E +N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQ 858
Query: 386 AVRQKI 391
A+R+++
Sbjct: 859 ALRERL 864
>gi|343500492|ref|ZP_08738384.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|418477317|ref|ZP_13046450.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820208|gb|EGU55034.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|384575057|gb|EIF05511.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 873
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 227 VLRHST-DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+LRH P++ + A R + V V KD+ L VV L + V A + T+ +
Sbjct: 670 LLRHDDHSQPLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKD 729
Query: 286 RAYLEFY------------------IRHI-----DGTPISSEPER-QRVIQCLEAA---- 317
L+ + I+H+ DG P + R R +Q +
Sbjct: 730 GYVLDTFMVLDQNGDVVDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFKVKTQVD 789
Query: 318 -VGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMG 376
+ ++ + LE D GLLA V TF ++G+++ A+++T + A ++F +T E G
Sbjct: 790 FLPTKSKKRTLLEFVALDTPGLLATVGATFADSGVHLHAAKITTIGERAEDLFIITSESG 849
Query: 377 NPADPKIIEAVRQKI 391
+ + +R K+
Sbjct: 850 GKLSEEQQQELRDKL 864
>gi|87307240|ref|ZP_01089385.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
gi|87289980|gb|EAQ81869.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
Length = 882
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNP-ADPKIIEA 386
+E+ +R GLL ++R + GL+V+ A+++T D+ +++FYV+DE G D + ++
Sbjct: 806 VEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSDEAGEKIEDEQRLQE 865
Query: 387 VRQKI 391
+R+ +
Sbjct: 866 IREHL 870
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G S F + +E+ +RVGLL + + L SV AK+ TH ++ + YV D
Sbjct: 795 IDNGTSEQF---SIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSD 851
Query: 165 CNSGSPIEDSQQIDRIEARL 184
+G IED Q++ I L
Sbjct: 852 -EAGEKIEDEQRLQEIREHL 870
>gi|196228226|ref|ZP_03127093.1| UTP-GlnB uridylyltransferase, GlnD [Chthoniobacter flavus Ellin428]
gi|196227629|gb|EDY22132.1| UTP-GlnB uridylyltransferase, GlnD [Chthoniobacter flavus Ellin428]
Length = 934
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+VIDN P TLV + + R G+L ++ + + N+ I + I+++ +D F+VTD
Sbjct: 846 RIVIDNDAHPVYTLVDIQTPDRLGLLYRLLRAIAETNVQIALSRIATEKGAAIDTFYVTD 905
Query: 84 LNGNKLTDESVISYIEQSLE 103
+ G KL + I+ ++++L+
Sbjct: 906 VEGRKLRSATAIAKLQKALQ 925
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN-SG 168
S+ G + G DR LL+ + L+ Q +++ A V+T + I+ + CN S
Sbjct: 737 SHPNKGHSEFLFCGWDRKALLARIAGSLSIAQLNILSADVFTRTDNLVLDIF-RVCNTSF 795
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
+ D + +E RLR ++ +N T ++ + +R L
Sbjct: 796 EAVTDPAETALVEKRLRQSMEDEN----FDFTAALEKSRKKRGFQ--------------L 837
Query: 229 RHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D+P + + N A Y++V++Q DR LL+ ++ + + + + I T A
Sbjct: 838 SQELDFPTRIVIDNDAHPVYTLVDIQTPDRLGLLYRLLRAIAETNVQIALSRIATEKGAA 897
Query: 288 YLEFYIRHIDGTPISSEPERQRVIQCLEAA 317
FY+ ++G + S ++ + L+ A
Sbjct: 898 IDTFYVTDVEGRKLRSATAIAKLQKALQVA 927
>gi|168049763|ref|XP_001777331.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671307|gb|EDQ57861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 334 DRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD-EMGNPADPKIIEAVRQKI- 391
+++ LL D+T F E G++V RA++ST+ ++IFYV D E P E VR++I
Sbjct: 664 EQEMLLFDITFAFNETGVSVKRAKISTQVAGVMDIFYVVDGETNGPLSEAHEEEVRKRIL 723
Query: 392 --------GLSNLKVK 399
L N KVK
Sbjct: 724 ERLAERRQALVNQKVK 739
>gi|385872915|gb|AFI91435.1| [Protein-PII] uridylyltransferase [Pectobacterium sp. SCC3193]
Length = 903
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H TD P+V + + A R + + + DR L V L V A I T+ +
Sbjct: 697 LLEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDG 756
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR--------- 327
++ F + DG+P++ + + + Q LE ++ RR S +R
Sbjct: 757 MAMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVN 815
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+EL D+ GLLA + F + L++ A +ST + ++F + D
Sbjct: 816 FLPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD 872
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
I PRV + A AT+++V + G+L Q L L ++ A++S+ G +D
Sbjct: 761 ITAPPPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVD 820
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL 102
F+VTD G L +E V +E++L
Sbjct: 821 AFYVTDAGGRPLGEEEAARVAKGVEEAL 848
>gi|218710320|ref|YP_002417941.1| PII uridylyl-transferase [Vibrio splendidus LGP32]
gi|254798834|sp|B7VIS0.1|GLND_VIBSL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218323339|emb|CAV19516.1| [Protein-PII] uridylyltransferase [Vibrio splendidus LGP32]
Length = 873
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYI- 293
P+V + A R + V V CKD+ L VV L + V A + + + L+ +I
Sbjct: 679 PLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKDGHVLDTFIV 738
Query: 294 -----------RH-----------IDGTPISSEPER-QRVIQCLEAA-----VGRRASEG 325
RH DG P + R R +Q + + ++ +
Sbjct: 739 LDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVEFLPTKSKKR 798
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIE 385
+EL D GLLA V TF E +N+ A+++T + A ++F +T + G + +
Sbjct: 799 TLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQ 858
Query: 386 AVRQKI 391
A+R+++
Sbjct: 859 ALRERL 864
>gi|225448926|ref|XP_002266940.1| PREDICTED: uncharacterized protein LOC100266711 [Vitis vinifera]
gi|296085960|emb|CBI31401.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRHIDGTPISSEPER-Q 308
+ V C D+T L D+ + + ++T G+ Y+ F++ T + +R
Sbjct: 25 ITVNCPDKTGLGCDLCRIILQFGLSITRGDVSTDGKWCYILFWVVGKPNTRWNLLHKRLM 84
Query: 309 RVIQCLEAAVG-----------RRASEGVRLEL-CMEDRQGLLADVTRTFRENGLNVTRA 356
V +A G + + L+ C DR+GLL DVT E L + R
Sbjct: 85 EVCPSCSSASGISFYKPEFQQQPKPPDVFLLKFWCYHDRKGLLHDVTEVLCELELTIKRV 144
Query: 357 EVSTERD-EALNIFYVTD 373
+VST D +++F+VTD
Sbjct: 145 KVSTAPDGRVMDLFFVTD 162
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 125/294 (42%), Gaps = 30/294 (10%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIE 181
DR GLL +V VL +L+ ++ KV T +GR+ L +V D + + Q+ I R++
Sbjct: 122 DRKGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFVTDTRNELHTKKRQEDTIHRLK 181
Query: 182 ARLRNVLKG-DNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
A L + + + ++ ++T S + + + +F+ +++ VT+
Sbjct: 182 AVLGDAMMSVEIELAGPEVTACSQGSSFLPPAITEEIFSLELPNERSNGSAASNSLSVTM 241
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGERAYLEFYIRH 295
N S++++ + C+D L++D++ TL D Y F A E L +R
Sbjct: 242 DNSLSPSHTLIQIICQDHKGLIYDIMRTLKDYNIQTSYGRFSANAKGMCEADLL---VRQ 298
Query: 296 IDGTPISSEPERQRVIQCLEAAVGRRASEGVR-------------LELCMEDRQGLLADV 342
+DG I +R + L + R VR +EL R + D+
Sbjct: 299 VDGKKIVDPNKRNALSSRLRMELFRPLRVAVRSRGPDTELLVANPVELSGRGRPLVFYDI 358
Query: 343 TRTFRENGLNVTRAEVSTE--RDEALNIFYVTDEMGNP---ADPKIIEAVRQKI 391
T + + + E++ +D ++ + + G+ + KI E VR+K+
Sbjct: 359 TLALKLLNIQIFSVEIARHMIQDREWEVYRILLDEGDGFCVSRNKIEEGVRKKL 412
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D +L ++ A++S+ G +D F+VT
Sbjct: 732 PRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVT 791
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
+G L + S + ET+
Sbjct: 792 GTDGAPLPGDEAASVARKLEETL 814
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV A R +V+ V+ +D LL + L D V A ++T G A FY+
Sbjct: 732 PRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVT 791
Query: 295 HIDGTPISSEPERQRVIQCLE 315
DG P+ + E V + LE
Sbjct: 792 GTDGAPLPGD-EAASVARKLE 811
>gi|254520963|ref|ZP_05133018.1| protein-P-II uridylyltransferase [Stenotrophomonas sp. SKA14]
gi|219718554|gb|EED37079.1| protein-P-II uridylyltransferase [Stenotrophomonas sp. SKA14]
Length = 875
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 66/168 (39%), Gaps = 30/168 (17%)
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHA--------------TINTA-----GERAYLE 290
V V DR L +V TL Y + A +N A G A LE
Sbjct: 694 VFVHSPDRDGLFAAIVMTLDRKGYGIHRARVLDGPADTIFDTFEVNPADTFADGSSANLE 753
Query: 291 FYIRHIDGTPISS-EPERQRVIQCLE-----AAVGRRASEGV-RLELCMEDRQGLLADVT 343
+R G ++ P R+ V + L + R G R L DR GLLADV
Sbjct: 754 AALREALGGDLTRLRPSRRVVPRQLRHFRFAPRIEFRDEPGATRFALVAPDRPGLLADVA 813
Query: 344 RTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAVRQKI 391
R GL V A ++T + A + F ++DE P + E RQ++
Sbjct: 814 FVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LTEPARQQL 857
>gi|270159640|ref|ZP_06188296.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
gi|269987979|gb|EEZ94234.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
Length = 876
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
A+ RL L DR GLLA + R F +++ A++ T + A + FY+T++ P
Sbjct: 799 ANNQTRLFLVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTP 858
Query: 382 KIIEAVRQKIGLSNLKVKELPMIY 405
+ E +R+K+ V+EL Y
Sbjct: 859 EEKEMLREKL------VRELSNTY 876
>gi|261822601|ref|YP_003260707.1| PII uridylyl-transferase [Pectobacterium wasabiae WPP163]
gi|261606614|gb|ACX89100.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium wasabiae WPP163]
Length = 903
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H TD P+V + + A R + + + DR L V L V A I T+ +
Sbjct: 697 LLEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDG 756
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR--------- 327
++ F + DG+P++ + + + Q LE ++ RR S +R
Sbjct: 757 MAMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVN 815
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+EL D+ GLLA + F + L++ A +ST + ++F + D
Sbjct: 816 FLPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD 872
>gi|289165574|ref|YP_003455712.1| PII uridylyl-transferase [Legionella longbeachae NSW150]
gi|288858747|emb|CBJ12652.1| putative PII uridylyl-transferase [Legionella longbeachae NSW150]
Length = 859
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 322 ASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADP 381
A+ RL L DR GLLA + R F +++ A++ T + A + FY+T++ P
Sbjct: 782 ANNQTRLFLVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTP 841
Query: 382 KIIEAVRQKIGLSNLKVKELPMIY 405
+ E +R+K+ V+EL Y
Sbjct: 842 EEKEMLREKL------VRELSNTY 859
>gi|357417896|ref|YP_004930916.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
gi|355335474|gb|AER56875.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
Length = 875
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
LEL DR GLLA V + R L V A ++T + A ++F+++DE P + +A+
Sbjct: 804 LELVAPDRPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEADRPLSGQARDAL 863
Query: 388 RQKI 391
R +
Sbjct: 864 RDAL 867
>gi|320160714|ref|YP_004173938.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
gi|319994567|dbj|BAJ63338.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
Length = 1219
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+V+DN TL+ + S G L E L + I + I + + DV +VTDL
Sbjct: 672 IVVDNDSSEHLTLLHIQSQDTVGFLYELTNALAITGIYIDRVRIETVNQRVRDVLYVTDL 731
Query: 85 NGNKLTDE 92
NGNK+T E
Sbjct: 732 NGNKITSE 739
>gi|271499493|ref|YP_003332518.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
gi|270343048|gb|ACZ75813.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
Length = 894
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L H T P+V + + A R + + + DR L V L V A I T+ +
Sbjct: 689 LLEHDTSKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQ-CLEAAVG---------RRASEGVR-------- 327
++ F + DG+P++ P+R +I+ +E A+ RR S +R
Sbjct: 749 MAMDTFIVLEPDGSPLA--PDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEV 806
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
+EL D+ GLLA V F + L++ A +ST + ++F + D
Sbjct: 807 SFLPTHTDRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSE 866
Query: 376 GNPADPKIIEAVRQKI 391
P++ ++Q++
Sbjct: 867 RRALSPELRLKLQQRL 882
>gi|406574780|ref|ZP_11050499.1| (p)ppGpp synthetase I SpoT/RelA [Janibacter hoylei PVAS-1]
gi|404555791|gb|EKA61274.1| (p)ppGpp synthetase I SpoT/RelA [Janibacter hoylei PVAS-1]
Length = 760
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPA 379
V++++ DR GLL+DVTR E+G+N+ A V T RD + I T EMG A
Sbjct: 681 VQVQVEALDRAGLLSDVTRVLSESGVNILSAAVQTSRDR-VAILRFTFEMGEVA 733
>gi|194365052|ref|YP_002027662.1| PII uridylyl-transferase [Stenotrophomonas maltophilia R551-3]
gi|194347856|gb|ACF50979.1| UTP-GlnB uridylyltransferase, GlnD [Stenotrophomonas maltophilia
R551-3]
Length = 875
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVQDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 47 GILLEAVQVLTD---LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL- 102
G L AV + D L +L + + DG F MD F + NG LT+ I ++Q L
Sbjct: 704 GHLFAAVAGVLDSQQLTILDAQILATRDG-FVMDTFVLLQRNGKPLTETRRIEEVKQHLL 762
Query: 103 ETIHYGRSNSFN-------------------------GLTALELTGTDRVGLLSEVFAVL 137
+ +H R N G T EL DR GL++ + A+L
Sbjct: 763 DVLHRRRKVPKNNRPLSRRLKNFSVKTQVNFLPVKHRGRTTFELVALDRPGLVARIAAIL 822
Query: 138 ADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
L S++ AK+ T G A +++ + G + D Q++
Sbjct: 823 QRLDVSLLAAKI-TTIGEQAEDLFIVSSHRGEALSDEQKL 861
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKIIEAV 387
+E+ +D GLL + R G+ V A ST A++ FYVTD G P P V
Sbjct: 798 IEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYVTDSSGAPLKPMHAAEV 857
Query: 388 RQKI 391
QK+
Sbjct: 858 AQKV 861
>gi|269956465|ref|YP_003326254.1| (p)ppGpp synthetase I SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
gi|269305146|gb|ACZ30696.1| (p)ppGpp synthetase I, SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
Length = 781
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 295 HIDGTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVT 354
++DG + ++PER I + + G A+ V++++ DR LL+D+TR +N +N+
Sbjct: 668 NVDG--LRAQPER---IVDVAWSTGSSATFLVQIQVEALDRSRLLSDITRVLSDNHVNIL 722
Query: 355 RAEVSTERDEALNIFYVTDEMGNPAD-PKIIEAVRQKIGLSNL 396
A VST +D YV EM PA +++ AVR+ G+ ++
Sbjct: 723 SASVSTTQDRIAMSRYVF-EMAEPAHLAQVLSAVRKVDGVFDV 764
>gi|433678509|ref|ZP_20510360.1| PII uridylyl-transferase [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430816370|emb|CCP40851.1| PII uridylyl-transferase [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 879
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 311 IQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFY 370
I+ E+ GRR RL L DR GLL++V + R L V A ++T + A ++F
Sbjct: 789 IEFRESVDGRR----TRLSLVAPDRPGLLSNVAQVLRRQQLRVHDARIATFGERAEDVFQ 844
Query: 371 VTDEMGNPADPKIIEAVRQKI 391
+TDE P + +A RQ +
Sbjct: 845 ITDEHNLP----LPDASRQAL 861
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 40/165 (24%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +++D FH+
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 83 DLNGNKLTD------------ESVISYIEQSLETIHYGRSNSFNGL-------------- 116
L G K+ D +++ Y +S E + G F G+
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKPPEKKVDVDVATH 182
Query: 117 ----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ L + DR GLL EV ++AD+ V A++ T
Sbjct: 183 VIVEDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDT 227
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE ++++ D+N+ ++ A I ++G D FHV+ G KL
Sbjct: 190 PKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHVS-YRGAKL 245
>gi|455651557|gb|EMF30283.1| PII uridylyl-transferase [Streptomyces gancidicus BKS 13-15]
Length = 808
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIR 294
P VTV A R +V+ V+ +D LLF + L D V A ++T G A FY+
Sbjct: 724 PRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVT 783
Query: 295 HIDGTPISSE 304
G P+ E
Sbjct: 784 QERGVPLPGE 793
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D + ++ A++S+ G +D F+VT
Sbjct: 724 PRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYVT 783
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
G L E ++ + E +
Sbjct: 784 QERGVPLPGEEAVAVARKLEEAL 806
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 47/173 (27%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN P AT+V V+ R G LL+ + L L L I++A + SD F+VT
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREH---KFYVT 102
Query: 83 DLNGN-------KLTD------ESVISYIEQSLETIHYGRSNSFNGL------------- 116
D+ + KL + ++++ + +S E + +G + +
Sbjct: 103 DMRTSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGA 162
Query: 117 -----TALEL----TGT---------DRVGLLSEVFAVLADLQCSVVEAKVWT 151
T +E+ TGT DR GLL+++ VL D+ +VV A+V T
Sbjct: 163 KRGISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDT 215
>gi|317124977|ref|YP_004099089.1| (p)ppGpp synthetase I SpoT/RelA [Intrasporangium calvum DSM 43043]
gi|315589065|gb|ADU48362.1| (p)ppGpp synthetase I, SpoT/RelA [Intrasporangium calvum DSM 43043]
Length = 760
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 326 VRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PKII 384
V+L++ DR LL+DVTR + +N+ A V T RD + I T EMG+PA +I
Sbjct: 680 VQLQVEALDRNRLLSDVTRVLSDQHVNILSASVQTSRDR-VAISRFTFEMGDPAHLEHVI 738
Query: 385 EAVRQKIGLSNL 396
+AVR+ G+ ++
Sbjct: 739 KAVRRIDGVFDV 750
>gi|317493191|ref|ZP_07951614.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918851|gb|EFV40187.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 889
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L+H P+V V + A R + + + DR L V L V A I T +
Sbjct: 686 LLKHDASKPLVLVSHLATRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDN 745
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQCLEAAVG---------RRASEGVR--------- 327
++ F + DG+P++ + + LE A+ RR S +R
Sbjct: 746 FAMDTFVVLEPDGSPLAQD-RHATIKHSLEQALTQQHYRHPRTRRPSPKLRHFTVPTEVS 804
Query: 328 -----------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTD 373
+EL D+ GLLA V F E GL++ A ++T + ++F + D
Sbjct: 805 FLPMHNERRSYMELVALDQPGLLAQVGEVFAEMGLSLHSARITTIGERVEDLFILAD 861
>gi|281413722|ref|ZP_06245464.1| (p)ppGpp synthetase, RelA/SpoT family protein [Micrococcus luteus
NCTC 2665]
Length = 730
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 298 GTPISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAE 357
T ++ EPER+ + A R V +++ DR+ LL+DVTR EN +N+ A
Sbjct: 661 ATLLAQEPERRTPVSW---APSRDTVYLVEIQIEALDRKSLLSDVTRVLSENHVNILSAS 717
Query: 358 VSTERDEALNIF 369
V+T RD ++F
Sbjct: 718 VNTTRDRVTHVF 729
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+ DRVGLL + L +LQ + AK+ T ++A + YV+ + G + D +Q
Sbjct: 786 TILEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADVFYVR-THQGEKVSDPEQ 844
Query: 177 IDRIEARLRNVLKGDNDI 194
ID ++ L L G ++
Sbjct: 845 IDELKRALLFWLDGPAEM 862
>gi|356547236|ref|XP_003542022.1| PREDICTED: uncharacterized protein LOC100785121 [Glycine max]
Length = 356
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--M 76
++ V IDN + P TLV++ A G L + ++ L D+N+ I S + + +
Sbjct: 170 KLKKANVAIDNYLSPAHTLVQIRCADHKGRLYDIMRTLKDMNMKISYGRFSPNSMGYRDL 229
Query: 77 DVFHVTDLNGNKLTD----ESVISYIEQ----SLETIHYGRSNSFNGLTA--LELTGTDR 126
D+F + +G K+ D ++ S+++Q L I R L A +EL+G R
Sbjct: 230 DIF-IQQNDGKKILDREKQSALCSHLKQEMLHPLRVIIANRGPDTELLVANPVELSGIGR 288
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ +V L L V A+V H+
Sbjct: 289 PRVFYDVTFALKTLGICVFSAEVGRHS 315
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA--TINTAGERAYLEFYIR 294
V + N+ ++++V ++C D L+D++ TL DM + + + N+ G R L+ +I+
Sbjct: 176 VAIDNYLSPAHTLVQIRCADHKGRLYDIMRTLKDMNMKISYGRFSPNSMGYRD-LDIFIQ 234
Query: 295 HIDGTPISSEPE--------RQRVIQCLEAAVGRRASEGVRL-----ELCMEDRQGLLAD 341
DG I + +Q ++ L + R + L EL R + D
Sbjct: 235 QNDGKKILDREKQSALCSHLKQEMLHPLRVIIANRGPDTELLVANPVELSGIGRPRVFYD 294
Query: 342 VTRTFRENGLNVTRAEV----STERDEALNIFYVTDEM-----GNPADPKIIEAVRQKI 391
VT + G+ V AEV ++ER+ + F + + G A KI+ VR+ +
Sbjct: 295 VTFALKTLGICVFSAEVGRHSTSEREWEVYRFLLDENCEFQLTGVAARNKIVNRVRRTL 353
>gi|223973865|gb|ACN31120.1| unknown [Zea mays]
gi|413916120|gb|AFW56052.1| hypothetical protein ZEAMMB73_227344 [Zea mays]
Length = 135
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ I + T VV D+ P +++ +++A R G+LLE ++++ D N+ ++ A I ++G
Sbjct: 37 KKVDIDIATHIVVEDDG--PKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGL 94
Query: 74 FFMDVFHVTDLNGNKLTDES 93
D FHV+ G KL S
Sbjct: 95 VAKDKFHVS-YRGAKLNSSS 113
>gi|386717761|ref|YP_006184087.1| [protein-PII] uridylyltransferase [Stenotrophomonas maltophilia
D457]
gi|384077323|emb|CCH11909.1| [Protein-PII] uridylyltransferase [Stenotrophomonas maltophilia
D457]
Length = 875
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
>gi|238754810|ref|ZP_04616161.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706970|gb|EEP99336.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
Length = 892
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+L+H + P+V V A R + + + DR L VV L V A I T +
Sbjct: 689 LLKHDSTNPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDG 748
Query: 287 AYLE-FYIRHIDGTPISSEPERQRVIQ-CLEAAVG---------RRASEGVR-------- 327
++ F + DG+P++ + R VI+ LE A+ RR S +R
Sbjct: 749 MAMDTFIVLEPDGSPLAQD--RHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEV 806
Query: 328 ------------LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEM 375
LEL D+ GLLA V F + GL++ A ++T + ++F + D+
Sbjct: 807 NFLPTHTERRSYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLADKD 866
Query: 376 GNPADPKIIEAVRQKI 391
+I + + Q++
Sbjct: 867 RQALSAEIRKELAQRL 882
>gi|408824910|ref|ZP_11209800.1| PII uridylyl-transferase [Pseudomonas geniculata N1]
Length = 875
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 160 IYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD 219
++ D ++G+ + D +D + RLR+ L+ + R+ R+H+
Sbjct: 724 FFILDQHNGARL-DHWSLDMLRTRLRDRLQSTDAART--------------RIHR----- 763
Query: 220 RDYERMPVLRHSTDYPVVTVQNWAD--RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
R P S D +Q +D R + + + KDR LL D+ D++ + H
Sbjct: 764 ----RSPPQLASIDV-ATQIQFLSDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNH 818
Query: 278 ATINTAGERAYLEFYIRHIDGTPISSEPERQRVIQCLEAAVGRRA 322
A ++T GER FY+ G + S + L AA+ R+
Sbjct: 819 ARVSTLGERVEDAFYVVERQGHAVDSPKRCAEIEAALRAAIHSRS 863
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPAD-PK 382
+++ +DR GLLAD+T F + +++ A VST + + FYV + G+ D PK
Sbjct: 791 IQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQGHAVDSPK 846
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
S+ G T +++ DR GLL+++ ADL S+ A+V T R+ YV + G
Sbjct: 782 SDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVE-RQGH 840
Query: 170 PIEDSQQIDRIEARLRNVL 188
++ ++ IEA LR +
Sbjct: 841 AVDSPKRCAEIEAALRAAI 859
>gi|168056713|ref|XP_001780363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668205|gb|EDQ54817.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 415
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 328 LELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERD-EALNIFYVTDEMGNPADPKIIEA 386
L+ C DR GLL DVT+ E L + + +VST D A+++F+VTD + K E
Sbjct: 112 LQACSSDRTGLLHDVTQKLWEMELTIKKIKVSTSPDGRAIDLFFVTDNRNQMSCKKRAEE 171
Query: 387 VRQKI 391
V +++
Sbjct: 172 VTKQL 176
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V++ R G LL+ + L +L L + KA + D + F +
Sbjct: 84 TPKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAI 143
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ I
Sbjct: 144 TKADTGRKVEDPELLEAI 161
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +ED +
Sbjct: 98 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAITKADTGRKVEDPEL 157
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N + + S ++ + +A T + Q + D + H +
Sbjct: 158 LEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPK--QQVDVD-------IATH-----I 203
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEFYIRH 295
+ DR S++ V+ DR LL D+V ++TD+ V +T G A +F++ +
Sbjct: 204 SVNDDGPDR--SLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVSY 260
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE 92
P +L+ V++A R G+L++ V+ +TD+N+ ++ ++G FHV+ +
Sbjct: 210 PDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS------YRGK 263
Query: 93 SVISYIEQSLETIHYGR 109
++I ++Q+ T GR
Sbjct: 264 AIIKPLQQNFNTTKLGR 280
>gi|424667778|ref|ZP_18104803.1| [protein-PII] uridylyltransferase [Stenotrophomonas maltophilia
Ab55555]
gi|401068040|gb|EJP76564.1| [protein-PII] uridylyltransferase [Stenotrophomonas maltophilia
Ab55555]
gi|456733865|gb|EMF58687.1| [Protein-PII] uridylyltransferase [Stenotrophomonas maltophilia
EPM1]
Length = 875
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
>gi|344206681|ref|YP_004791822.1| UTP-GlnB uridylyltransferase, GlnD [Stenotrophomonas maltophilia
JV3]
gi|343778043|gb|AEM50596.1| UTP-GlnB uridylyltransferase, GlnD [Stenotrophomonas maltophilia
JV3]
Length = 875
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
>gi|340360127|ref|ZP_08682598.1| GTP diphosphokinase [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883894|gb|EGQ73726.1| GTP diphosphokinase [Actinomyces sp. oral taxon 448 str. F0400]
Length = 782
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 301 ISSEPERQRVIQCLEAAVGRRASEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVST 360
+ EPER + E A ++ V+LE+ DR GLLAD+TR +N +N+ A + T
Sbjct: 672 LGREPERMLSVHWAEHA---HSAYLVQLEVEALDRGGLLADITRVLADNHVNLISATIGT 728
Query: 361 ERDEALNIFYVTD 373
RD + +V +
Sbjct: 729 SRDRVVTGRFVVE 741
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLEF 291
T P+V + A R + V V D+ L VV L + V A I T+ + L+
Sbjct: 676 TSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDT 735
Query: 292 Y------------------IRHIDGTPISSEPERQRV-----------IQCLEAAVGRRA 322
+ I+H+ S P++ R ++ + ++
Sbjct: 736 FMVLDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKS 795
Query: 323 SEGVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPK 382
+ +E D GLLA V RTF + G+N+ A+++T + A ++F +T E G +
Sbjct: 796 KKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEE 855
Query: 383 IIEAVRQKI 391
+R+K+
Sbjct: 856 QQTQLREKL 864
>gi|190573511|ref|YP_001971356.1| PII uridylyl-transferase [Stenotrophomonas maltophilia K279a]
gi|190011433|emb|CAQ45051.1| putative [protein-PII] uridylyltransferase [Stenotrophomonas
maltophilia K279a]
Length = 875
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 325 GVRLELCMEDRQGLLADVTRTFRENGLNVTRAEVSTERDEALNIFYVTDEMGNPADPKII 384
R L DR GLLADV R GL V A ++T + A + F ++DE P +
Sbjct: 795 ATRFALVAPDRPGLLADVAFVLRNQGLRVHDARIATFGERAEDTFVISDEHDLP----LT 850
Query: 385 EAVRQKI 391
E RQ++
Sbjct: 851 EPARQQL 857
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,428,691,195
Number of Sequences: 23463169
Number of extensions: 254272571
Number of successful extensions: 651749
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 386
Number of HSP's that attempted gapping in prelim test: 645034
Number of HSP's gapped (non-prelim): 4587
length of query: 444
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 298
effective length of database: 8,933,572,693
effective search space: 2662204662514
effective search space used: 2662204662514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)