BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013390
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 143/314 (45%), Gaps = 15/314 (4%)
Query: 94 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDL 153
D + E ++ ER+ V + + F ++ SA L L L +K +
Sbjct: 147 DQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRF-LQEKKGSMM 205
Query: 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----KETYS 208
+ G E++ +P ++ ++ RG + L + +F+ +++ + + G ++
Sbjct: 206 AFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIE 265
Query: 209 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACS 268
A A V A+ + L+ L+ ++ F ++ L + V+++ LWFD+K+T ++ +
Sbjct: 266 ADAYVSALPVDPLKLLLPDAWKA-MPYFQQLDGLQGVPVINIHLWFDRKLT--DIDHLLF 322
Query: 269 GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCI-K 327
L+ + D++ E++D ++++ F A + + D+ ++A ++ + K +
Sbjct: 323 SRSPLLS-VYADMSNTCREYEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEKLFPQ 381
Query: 328 DFS---TATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQE 384
FS A + +KI + P S+ PG +Y + N F+ GD+ R+ + S E
Sbjct: 382 HFSGENPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYLA-SME 440
Query: 385 RSYVTGLEAANRVV 398
+ ++G A ++
Sbjct: 441 GAVLSGKLTAQAII 454
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 171/427 (40%), Gaps = 39/427 (9%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ---YSEEGLEV-----EFPIFQDLNQLPTPLG 55
F++ + N+F+L+ ++G F + A + +G EV FPI N L
Sbjct: 57 FFFNYANLFALMRKVG--AFENLLPKAHTHTFINKGGEVGELDFRFPIGAPFNGLKAFFT 114
Query: 56 TLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNV 115
T T +L L + PL+ ++D++ R D I+ + F+ G SE + +
Sbjct: 115 TSQLTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFADWFRSHGGSEGSLKRM 174
Query: 116 IGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175
P+ F E SA L + + + A + L G+ E + +P +D ++ R
Sbjct: 175 WNPIAYALGFIDTENISARCMLTV-FQMFAAKTEASKLNLLAGSPAEYLHKPILDYIQAR 233
Query: 176 GCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAV--------VLAVGISTLQELIKN 227
G RRV + Y E VV G + AV + A + +Q L+
Sbjct: 234 GATLHLRRRVREIEYTETNG--QTVVTGLQIADGDAVERVEADVYLAACDVPGIQRLLPE 291
Query: 228 SILCNREEFLKVLNLASIDVVSVKLWFDKKVT------VPNVSNACSGFGDSLAWT---- 277
+ EF + L ++ V +V+L FD VT + + +G D+L +T
Sbjct: 292 A-WRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGL-DNLLYTADAD 349
Query: 278 ---FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 332
F D L+ D ++ +++Q + + +K++ + + + +
Sbjct: 350 FSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQVHELFPSSRDL 409
Query: 333 TVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 392
+ + + +SL PG + T N F+AG + T + S E + ++G
Sbjct: 410 NMTWSNVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSY-TQQDYIDSMEGATISGRR 468
Query: 393 AANRVVD 399
AA +++
Sbjct: 469 AAKAMLE 475
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 170/415 (40%), Gaps = 37/415 (8%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSA----QYSEEGLEVEFPIFQDLNQLPTPLGTLFY 59
F+ + N+ L EL I+ W + + Q + G F D +P P+ L
Sbjct: 57 FFGAYPNMLQLFKELDIEDRLQWKEHSMIFNQPEKPGTYSRF----DFPDIPAPINGLVA 112
Query: 60 TQFSRLPLVDRLT-------SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLY 112
+ D LT L L+ A++ + KY T E + R+
Sbjct: 113 ILRNN----DMLTWPEKIRFGLGLLPAIVQGQSYVEEMDKY---TWSEWMAKQNIPPRIE 165
Query: 113 RNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSM 172
+ V + + F ++ SA L L L + + + G E++ +P +D +
Sbjct: 166 KEVFIAMSKALNFIDPDEISATILLTALNRF-LQEKNGSKMAFLDGAPPERLCQPLVDYI 224
Query: 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----KETYSAGAVVLAVGISTLQELIKN 227
RG E + + + + +E+ ++ G E +A V A+ + L+ ++
Sbjct: 225 TERGGEVHINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVP- 283
Query: 228 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDE 287
+ EF ++ L + V+++ LWFD+K+T ++ + L+ + D++ E
Sbjct: 284 APWREYPEFKQIQGLEGVPVINLHLWFDRKLT--DIDHLLFSRSPLLS-VYADMSNTCRE 340
Query: 288 HKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDF----STATVMDHKIRRFP 343
+ D ++++ A + + D+++VA ++ + + + A ++ + + P
Sbjct: 341 YSDPDKSMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTP 400
Query: 344 KSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 398
+S+ PG TS PN ++AGD+ ++ S E + ++G + A +
Sbjct: 401 RSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLG-SMEGAVLSGKQCAQAIA 454
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 168/407 (41%), Gaps = 18/407 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + N+ +L ELGI W + S ++ EF F LP PL +
Sbjct: 167 FFGAYPNMQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILK 226
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ ++ L+ A++ + A D I+ ++ ++ G +R+ V +
Sbjct: 227 NNEMLTWPEKVKFAIGLLPAMLGGQSYVEA---QDGISVKDWMRKQGVPDRVTDEVFIAM 283
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P ++ + ++G +
Sbjct: 284 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQV 342
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ +E+ ++ T A V A + + L+ F K+
Sbjct: 343 RLNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPED-WKEIPYFQKL 401
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N S+ L + D++ E+ D + ++++
Sbjct: 402 EKLVGVPVINVHIWFDRKLK--NTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELV 459
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ PG
Sbjct: 460 FAPAEEWVSRSDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCE 519
Query: 355 KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 400
+ + ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 520 PCRLLQRSPVEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQAIVQDY 565
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 166/411 (40%), Gaps = 26/411 (6%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFY 59
F+ + N+ +L ELGI W M A S+ G EF F + LP PL ++
Sbjct: 149 FFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFPDVLPAPLNGIWA 205
Query: 60 TQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNV 115
+ + LT + I V + Y D ++ +E ++ G ER+ V
Sbjct: 206 ILRNN----EMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEV 261
Query: 116 IGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175
+ + F ++ S L I L + + + G E++ P +D +R+
Sbjct: 262 FIAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSL 320
Query: 176 GCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREE 235
G E R+ +++ S ++ T A V A + L+ L+ +
Sbjct: 321 GGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDP-WKEIPY 379
Query: 236 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATV 295
F K+ L + V++V +WFD+K+ N + +L + D++ E+ D + ++
Sbjct: 380 FKKLDKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSM 437
Query: 296 IQADFYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFF 350
++ F A E + D ++ + L K D S A ++ + + + P+S+
Sbjct: 438 LELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTI 497
Query: 351 PGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 400
P + ++AGD+ ++ + S E + ++G + +V DY
Sbjct: 498 PNCEPCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKFCSQSIVQDY 547
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 161/405 (39%), Gaps = 17/405 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + NI +L ELGI W + S ++ EF F LP PL ++
Sbjct: 161 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILR 220
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ +L L+ A++ D T E K+ G +R+ V +
Sbjct: 221 NNEMLTWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAM 277
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P +D +R+ G E
Sbjct: 278 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ + + + + A V A + L+ L+ F K+
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKL 395
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 396 EKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELV 453
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 454 FAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCE 513
Query: 355 KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 399
+ ++AGD+ ++ + S E + ++G A VV+
Sbjct: 514 PCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSVVE 557
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 161/405 (39%), Gaps = 17/405 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + NI +L ELGI W + S ++ EF F LP PL ++
Sbjct: 161 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILR 220
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ +L L+ A++ D T E K+ G +R+ V +
Sbjct: 221 NNEMLTWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAM 277
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P +D +R+ G E
Sbjct: 278 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ + + + + A V A + L+ L+ F K+
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKL 395
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 396 EKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELV 453
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 454 FAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCE 513
Query: 355 KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 399
+ ++AGD+ ++ + S E + ++G A VV+
Sbjct: 514 PCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSVVE 557
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 148/369 (40%), Gaps = 32/369 (8%)
Query: 58 FYTQFSRLPLVDRLTSL------PLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERL 111
F+T S+L L D+L + P++ ++DF+ R D I+ + F+ G S
Sbjct: 112 FFTT-SQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGS 170
Query: 112 YRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDS 171
+ + P+ F E SA L I F + + + L G+ E + +P +
Sbjct: 171 IKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASV-LRMLEGSPDEYLHQPILRY 229
Query: 172 MRTRGCEFLDGRRVTDFIYDEE--RCCISDVVCGK----ETYSAGAVVLAVGISTLQELI 225
+ RG + R+V + Y E + ++ +V K E +A A V A I +Q ++
Sbjct: 230 LEARGTKVYTRRQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVL 289
Query: 226 KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNA------CSGFGDSLAWT-- 277
EF + L ++ V +V++ FD VT N +G D+L +T
Sbjct: 290 PQE-WRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGL-DNLLYTAD 347
Query: 278 -----FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFS 330
F DL D ++ +++Q + + ++ + + + +
Sbjct: 348 ADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSR 407
Query: 331 TATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTG 390
+ + + + +SL PG Y T N F+AG + T + S E + V+G
Sbjct: 408 ELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSY-TQQDYIDSMEGATVSG 466
Query: 391 LEAANRVVD 399
AA ++D
Sbjct: 467 RRAAKVILD 475
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 162/408 (39%), Gaps = 20/408 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + NI +L EL I+ W + + ++ EF F LP P+ ++
Sbjct: 153 FFGAYPNIQNLFGELRIEDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPINGIWAILR 212
Query: 63 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGP 118
+ + LT + I V + Y D +T E K+ G +R+ V
Sbjct: 213 NN----EMLTWPEKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQGVPDRVNDEVFIA 268
Query: 119 LVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCE 178
+ + F ++ S L I L + + + G E++ P +D +R+RG E
Sbjct: 269 MSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGE 327
Query: 179 FLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLK 238
R+ + + + + A V A + + L+ F K
Sbjct: 328 VRLNSRIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQE-WSEITYFKK 386
Query: 239 VLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQA 298
+ L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 387 LEKLVGVPVINVHIWFDRKLN--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLEL 444
Query: 299 DFYHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGS 353
F A+E + D +++ + L+K D S A ++ + I + P+S+ P
Sbjct: 445 VFAPADEWIGRSDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNC 504
Query: 354 YKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 400
+ ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 505 EPCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSIVQDY 551
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 174/423 (41%), Gaps = 32/423 (7%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + N+F+L++++G K + + +G + F+ L P F+T
Sbjct: 57 FFGCYYNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTT- 115
Query: 63 SRLPLVDR------LTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 116
S+L D+ L + P++ ++DFD R D I+ E F G +E + +
Sbjct: 116 SQLDTKDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMW 175
Query: 117 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 176
P+ F E SA L I + + A + L G+ +E + +P + + RG
Sbjct: 176 DPIAYALGFIDTENISARCMLTI-FQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRG 234
Query: 177 CEFLDGRRVTDF---IYDEER----CCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI 229
+F +V + + D E I+D V K T +A A V A + ++ L+ +
Sbjct: 235 TKFYTRHKVKEIKTKVTDGETRVTGLIINDGVETK-TVTADAYVAACDVPGIKNLLPENW 293
Query: 230 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN----VSNACSGFG-DSLAWT------- 277
+ F K+ L ++ V +V+L FD VT N FG D+L +T
Sbjct: 294 RTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSC 353
Query: 278 FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335
F DL D ++ +++Q + M ++ + + + + + +
Sbjct: 354 FADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMT 413
Query: 336 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 395
+ + + +SL PG + T N F+AG + T + S E + ++G +AA
Sbjct: 414 WYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSY-TQQDYIDSMEGATLSGRQAAQ 472
Query: 396 RVV 398
++
Sbjct: 473 AIL 475
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 168/410 (40%), Gaps = 24/410 (5%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF- 58
F+ + NI +L ELGI W M A S+ G EF F LP PL +
Sbjct: 168 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFSEALPAPLNGILA 224
Query: 59 -YTQFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 116
L +++ ++ L+ A++ + A D I+ ++ ++ G +R+ V
Sbjct: 225 ILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVEA---QDGISVKDWMRKQGVPDRVTDEVF 281
Query: 117 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 176
+ + F ++ S L I L + + + G E++ P ++ + ++G
Sbjct: 282 IAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKG 340
Query: 177 CEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 236
+ R+ +E+ S ++ A V A + + L+ F
Sbjct: 341 GQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPED-WKEIPYF 399
Query: 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 296
K+ L + V++V +WFD+K+ N + SL + D++ E+ + + +++
Sbjct: 400 QKLEKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSML 457
Query: 297 QADFYHANELMPLKDDQVVAKAVSYLS-----KCIKDFSTATVMDHKIRRFPKSLTHFFP 351
+ F A E + D +++ + L+ + D S A ++ + + + P+S+ P
Sbjct: 458 ELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVP 517
Query: 352 GSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 400
G + ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 518 GCEPCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQAIVQDY 566
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 130/310 (41%), Gaps = 10/310 (3%)
Query: 94 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDL 153
D ++ +E K+ G ER+ V + + F ++ S L I L + +
Sbjct: 246 DGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKM 304
Query: 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVV 213
+ G E++ P +D +++ G E R+ +++ S ++ + A V
Sbjct: 305 AFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYV 364
Query: 214 LAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS 273
A + L+ L+ ++ F ++ L + V++V +WFD+K+ N +
Sbjct: 365 FATPVDILKLLLPDN-WKGIPYFQRLDKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSP 421
Query: 274 LAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIK-----D 328
L + D++ E+ + ++++ F A E + DD ++ ++ L+K D
Sbjct: 422 LLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTELAKLFPDEISAD 481
Query: 329 FSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYV 388
S A ++ + + + P+S+ P + ++AGD+ ++ + S E + +
Sbjct: 482 QSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLA-SMEGAVL 540
Query: 389 TGLEAANRVV 398
+G A +V
Sbjct: 541 SGKLCAQAIV 550
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 164/410 (40%), Gaps = 24/410 (5%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + N+ +L ELGI W + S ++ EF F LP PL ++
Sbjct: 154 FFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILR 213
Query: 63 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGP 118
+ + LT + I V + Y D +T E ++ G +R+ V
Sbjct: 214 NN----EMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVFIA 269
Query: 119 LVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCE 178
+ + F ++ S L I L + + + G E++ P +D +++ G
Sbjct: 270 MSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGR 328
Query: 179 FLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNRE--EF 236
R+ + + V+ + A V+A + L+ L+ RE F
Sbjct: 329 AQLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEW---REIPYF 385
Query: 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 296
K+ L + V++V +WFD+K+ N + L + D++ E+ D + +++
Sbjct: 386 QKLDKLVGVPVINVHIWFDRKLK--NTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSML 443
Query: 297 QADFYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFP 351
+ F A E + D +++ + + L+K D S A ++ + + + P+S+ P
Sbjct: 444 ELVFAPAEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIP 503
Query: 352 GSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 400
+ ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 504 DCEPCRPLQRSPIEGFYLAGDYTNQKYLA-SMEGAVLSGKLCAQSIVQDY 552
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 162/423 (38%), Gaps = 39/423 (9%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL 57
F+ + N+F L+ ++G +K T + + L+ FP+ L+ + L T
Sbjct: 121 FFGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFPVGAPLHGIQAFLRTN 180
Query: 58 FYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 117
+ + L P++ A++D D R D I+ + F G + +
Sbjct: 181 QLKVYDKARNAVALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWD 240
Query: 118 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRG 176
P+ F + SA L I F + A + L+ +G+ + P + RG
Sbjct: 241 PVRYALGFIDCDNISARCMLTI--FTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRG 298
Query: 177 CEFLDGRRVTDFIYDEE-------RCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI 229
F + +Y++ + + +E A A V A + ++ L+ S
Sbjct: 299 GRFHLRWGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLP-SE 357
Query: 230 LCNREEFLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT------- 277
E F + L + VV+V+L ++ VT + G D+L +T
Sbjct: 358 WREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSC 417
Query: 278 FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335
F DL + D + + ++IQA + MPL ++++++K + + V
Sbjct: 418 FSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVT 477
Query: 336 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHG---SWSQERSY 387
+ + +SL PG+ + T N F++G D+I + G S + +Y
Sbjct: 478 WSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAY 537
Query: 388 VTG 390
+ G
Sbjct: 538 ICG 540
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 165/433 (38%), Gaps = 50/433 (11%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL 57
F+ + N+F L+ ++G +K T + + L+ FP+ ++ + L T
Sbjct: 113 FFGCYNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTN 172
Query: 58 FYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 117
+ +L L P++ A++D D R DSI+ + F G + + +
Sbjct: 173 QLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWD 232
Query: 118 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 177
P+ F + SA L I + + L +G+ + P + RG
Sbjct: 233 PVAYALGFIDCDNMSARCMLTIFSLFATKTEASL-LRMLKGSPDVYLSGPIKQYITDRGG 291
Query: 178 EFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI---LCN-- 232
+ +YD+ ETY G LA+ +T ++++K + C+
Sbjct: 292 RIHLRWGCREILYDKS--------ADGETYVTG---LAISKATNKKIVKADVYVAACDVP 340
Query: 233 ----------REE--FLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLA 275
RE F + L + VV+V+L ++ VT + G D+L
Sbjct: 341 GIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLL 400
Query: 276 WT-------FFDLN--KIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCI 326
+T F DL D + + T++Q + M + +D+++ K +++
Sbjct: 401 YTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELF 460
Query: 327 KDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERS 386
V + + +SL PG + T N F+AG + T + S E +
Sbjct: 461 PSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSY-TKQDYIDSMEGA 519
Query: 387 YVTGLEAANRVVD 399
++G +A++ + D
Sbjct: 520 TLSGRQASSYICD 532
>sp|O18141|NHR79_CAEEL Nuclear hormone receptor family member nhr-79 OS=Caenorhabditis
elegans GN=nhr-79 PE=2 SV=2
Length = 463
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 360 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 402
G FP++F D I +R S S+ +YVTG+E R+ G
Sbjct: 159 GVDDFPDIFTDSDEIRSRMTSISEASAYVTGMEEEERLFGLAG 201
>sp|Q31IB6|GLGB_THICR 1,4-alpha-glucan branching enzyme GlgB OS=Thiomicrospira crunogena
(strain XCL-2) GN=glgB PE=3 SV=1
Length = 726
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 235 EFLKVLNL-ASIDVVSVKLWFDKKVTVPNVSNAC--SGFGDSLAWT---------FFDLN 282
EFLK LN + ++ + P VS G G S+ W FF +
Sbjct: 439 EFLKTLNAEVHAQCPGALMMAEESTSWPMVSRPTWMGGLGFSMKWNMGWMNDTLDFFQQD 498
Query: 283 KIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 328
IY + + T Q Y N ++PL D+VV + +SK D
Sbjct: 499 PIYRPYHHNQLTFSQMYAYSENFILPLSHDEVVHMKHALVSKMPGD 544
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 159/420 (37%), Gaps = 34/420 (8%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL 57
F+ + N+F L+ ++G +K T + L+ P+ L+ + L T
Sbjct: 121 FFGCYNNLFRLMKKVGADENLLVKDHTHTFVNRGGEIGELDFRLPMGAPLHGIRAFLTTN 180
Query: 58 FYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 117
+ + L P++ A+ID + R D+I+ + F G + + +
Sbjct: 181 QLKPYDKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWD 240
Query: 118 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 177
P+ F + SA L I + + L +G+ + P + +G
Sbjct: 241 PVAYALGFIDCDNISARCMLTIFSLFATKTEASL-LRMLKGSPDVYLSGPIRKYITDKGG 299
Query: 178 EFLDGRRVTDFIYDE---ERCCISDVVCGKET----YSAGAVVLAVGISTLQELIKNSIL 230
F + +YDE I+ + K T A V A + ++ LI +
Sbjct: 300 RFHLRWGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEW- 358
Query: 231 CNRE--EFLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT------ 277
RE F + L + VV+V+L ++ VT + + G D+L +T
Sbjct: 359 --REWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFS 416
Query: 278 -FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATV 334
F DL + D + + ++IQA + MPL +D ++ + + V
Sbjct: 417 CFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEV 476
Query: 335 MDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAA 394
+ + + +SL PG + T N F+AG + T + S E + ++G +AA
Sbjct: 477 LWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSY-TKQDYIDSMEGATLSGRQAA 535
>sp|Q9ZCN2|Y691_RICPR Uncharacterized protein RP691 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP691 PE=4 SV=1
Length = 656
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 237 LKVLNLAS-IDVVSVKLWFDKKVTVPNVSNACSGFGDSLA----WTFFDLNKIYDEHKDD 291
LK+L+LA+ IDV++ ++ NV NA S G ++A T LNKI DD
Sbjct: 578 LKLLSLATLIDVLTTA------ISDLNVGNAISSAGKNIAEKTATTLTWLNKIASGTNDD 631
Query: 292 SATVIQADFYHANELMPL 309
+ I D H EL PL
Sbjct: 632 TNDDIVIDIAHTEELQPL 649
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 161/429 (37%), Gaps = 55/429 (12%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLG 55
F+ + N+F L+ ++G +K T K + E L+ FP+ L+ + L
Sbjct: 136 FFGCYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGE--LDFRFPVGAPLHGINAFLS 193
Query: 56 TLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNV 115
T + + L P++ A++D D R D+++ E F G + + +
Sbjct: 194 TNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRM 253
Query: 116 IGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDL---------VWCRGTLREKIFE 166
P+ F + SA L I F + A + L V+ G +++ I +
Sbjct: 254 WDPVAYALGFIDCDNMSARCMLTI--FALFATKTEASLLRMLKGSPDVYLSGPIKKYIMD 311
Query: 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKET----YSAGAVVLAVGISTLQ 222
GC R V + +S + K T A A V A + ++
Sbjct: 312 KGGRFHLRWGC-----REVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIK 366
Query: 223 ELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT-VPNVSNA-----CSGFGDSLAW 276
L+ E F + L + VV+V+L ++ VT + ++ + +G D+L +
Sbjct: 367 RLVPQK-WRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGL-DNLLY 424
Query: 277 T-------FFDLNKIY--DEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIK 327
T F DL D + + +++Q + MPL +D+++ + +
Sbjct: 425 TPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFP 484
Query: 328 DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHG--- 379
V + + +SL PG + T N F+AG D+I + G
Sbjct: 485 SSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATL 544
Query: 380 SWSQERSYV 388
S Q +Y+
Sbjct: 545 SGRQASAYI 553
>sp|O67115|SYW_AQUAE Tryptophan--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=trpS
PE=3 SV=1
Length = 395
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 7/47 (14%)
Query: 391 LEAANRVVDYLGDGSFSKIIPVEEDE-PHIEALRTVNRRFNEIRAQL 436
L+AA+ ++ Y G+G +PV ED+ PHIE R + RRFN + ++
Sbjct: 200 LQAAD-ILIYKGEG-----VPVGEDQLPHIELSREIARRFNRLYGKI 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,619,146
Number of Sequences: 539616
Number of extensions: 6943646
Number of successful extensions: 18647
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 18639
Number of HSP's gapped (non-prelim): 22
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)