Query 013393
Match_columns 444
No_of_seqs 465 out of 2519
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:45:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gu3_A Methyltransferase; alph 99.7 1.5E-18 5.1E-23 169.1 2.0 213 46-296 24-264 (284)
2 1vl5_A Unknown conserved prote 99.6 8.6E-16 2.9E-20 147.0 13.3 131 46-179 39-189 (260)
3 3bus_A REBM, methyltransferase 99.6 3E-15 1E-19 143.9 15.7 154 16-179 41-215 (273)
4 2p7i_A Hypothetical protein; p 99.6 1.8E-15 6.2E-20 142.4 11.8 126 47-179 45-198 (250)
5 2o57_A Putative sarcosine dime 99.6 3.6E-15 1.2E-19 145.4 13.9 158 16-179 58-233 (297)
6 3kkz_A Uncharacterized protein 99.6 1E-14 3.4E-19 140.2 16.5 130 46-178 48-194 (267)
7 3hnr_A Probable methyltransfer 99.6 4E-15 1.4E-19 138.3 13.0 135 46-185 47-206 (220)
8 3ege_A Putative methyltransfer 99.6 5.1E-16 1.7E-20 149.1 6.9 111 22-148 20-132 (261)
9 3f4k_A Putative methyltransfer 99.6 9.2E-15 3.1E-19 139.1 15.4 128 47-177 49-193 (257)
10 1xxl_A YCGJ protein; structura 99.6 1.6E-14 5.6E-19 136.7 16.3 132 46-179 23-173 (239)
11 3ujc_A Phosphoethanolamine N-m 99.6 5.3E-15 1.8E-19 141.0 12.9 128 46-179 57-205 (266)
12 4gek_A TRNA (CMO5U34)-methyltr 99.6 5E-15 1.7E-19 143.1 12.3 104 39-148 68-180 (261)
13 1nkv_A Hypothetical protein YJ 99.6 5.7E-15 2E-19 140.4 12.4 146 20-176 20-183 (256)
14 3dli_A Methyltransferase; PSI- 99.6 4.8E-16 1.7E-20 147.1 4.8 124 46-178 43-182 (240)
15 3h2b_A SAM-dependent methyltra 99.6 2.2E-15 7.7E-20 138.4 8.8 127 47-179 44-181 (203)
16 3l8d_A Methyltransferase; stru 99.6 5.2E-15 1.8E-19 139.4 11.4 127 46-178 55-198 (242)
17 3dlc_A Putative S-adenosyl-L-m 99.6 7.9E-15 2.7E-19 135.3 12.3 130 47-178 46-201 (219)
18 4hg2_A Methyltransferase type 99.6 8E-16 2.7E-20 148.4 5.7 96 46-149 41-138 (257)
19 3dh0_A SAM dependent methyltra 99.6 1.5E-14 5.1E-19 134.3 14.0 132 46-178 39-179 (219)
20 3mgg_A Methyltransferase; NYSG 99.6 7.8E-15 2.7E-19 141.4 12.4 133 46-179 39-197 (276)
21 3g5l_A Putative S-adenosylmeth 99.6 7.2E-15 2.5E-19 139.8 11.0 129 45-179 45-215 (253)
22 3vc1_A Geranyl diphosphate 2-C 99.6 2.3E-14 7.9E-19 141.2 14.4 132 46-180 119-269 (312)
23 2ex4_A Adrenal gland protein A 99.6 5.6E-15 1.9E-19 139.8 9.1 129 45-179 80-224 (241)
24 3ou2_A SAM-dependent methyltra 99.6 9.9E-15 3.4E-19 134.9 10.5 125 47-178 49-203 (218)
25 3hem_A Cyclopropane-fatty-acyl 99.5 8.8E-15 3E-19 143.3 10.0 143 46-193 74-256 (302)
26 3dtn_A Putative methyltransfer 99.5 4E-15 1.4E-19 139.7 6.7 97 45-148 45-150 (234)
27 1xtp_A LMAJ004091AAA; SGPP, st 99.5 9.5E-15 3.2E-19 138.6 9.0 129 45-179 94-237 (254)
28 3sm3_A SAM-dependent methyltra 99.5 5.2E-14 1.8E-18 131.4 13.5 128 46-179 32-206 (235)
29 1kpg_A CFA synthase;, cyclopro 99.5 1.4E-14 4.7E-19 140.6 9.8 139 46-189 66-237 (287)
30 1pjz_A Thiopurine S-methyltran 99.5 8.9E-15 3E-19 135.5 8.0 131 46-178 24-174 (203)
31 3ccf_A Cyclopropane-fatty-acyl 99.5 3.6E-14 1.2E-18 137.3 12.5 98 45-149 58-157 (279)
32 2p35_A Trans-aconitate 2-methy 99.5 4.2E-14 1.4E-18 134.5 12.4 97 46-149 35-135 (259)
33 4htf_A S-adenosylmethionine-de 99.5 3.3E-14 1.1E-18 137.8 11.8 133 46-180 70-232 (285)
34 3e23_A Uncharacterized protein 99.5 1.5E-14 5E-19 133.9 8.8 126 46-179 45-181 (211)
35 2yqz_A Hypothetical protein TT 99.5 3.1E-14 1.1E-18 135.6 11.3 94 46-145 41-140 (263)
36 1ve3_A Hypothetical protein PH 99.5 2.6E-14 9E-19 133.1 10.4 133 9-148 9-144 (227)
37 4fsd_A Arsenic methyltransfera 99.5 2.6E-14 8.7E-19 145.3 11.1 132 46-178 85-249 (383)
38 4e2x_A TCAB9; kijanose, tetron 99.5 5.1E-15 1.8E-19 151.7 5.0 162 6-179 77-252 (416)
39 3jwg_A HEN1, methyltransferase 99.5 1.5E-13 5.2E-18 127.7 14.2 131 46-177 31-189 (219)
40 3bkw_A MLL3908 protein, S-aden 99.5 4.6E-14 1.6E-18 132.8 10.7 98 45-148 44-146 (243)
41 3i9f_A Putative type 11 methyl 99.5 7E-14 2.4E-18 124.7 11.3 125 46-179 19-147 (170)
42 3pfg_A N-methyltransferase; N, 99.5 1.1E-13 3.6E-18 132.6 12.7 95 46-146 52-151 (263)
43 1vlm_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 129.3 12.3 124 46-179 49-187 (219)
44 3jwh_A HEN1; methyltransferase 99.5 2.5E-13 8.6E-18 126.2 14.6 130 46-177 31-189 (217)
45 2aot_A HMT, histamine N-methyl 99.5 2.8E-14 9.5E-19 139.3 8.3 103 45-148 53-174 (292)
46 3cgg_A SAM-dependent methyltra 99.5 1.8E-13 6E-18 123.7 13.0 125 46-179 48-174 (195)
47 3g2m_A PCZA361.24; SAM-depende 99.5 5.7E-14 1.9E-18 137.4 10.4 100 47-148 85-192 (299)
48 3e8s_A Putative SAM dependent 99.5 6.1E-14 2.1E-18 130.1 9.3 128 46-179 54-208 (227)
49 3mti_A RRNA methylase; SAM-dep 99.5 2.4E-13 8.1E-18 123.1 12.9 131 47-177 25-166 (185)
50 3lcc_A Putative methyl chlorid 99.5 8.2E-14 2.8E-18 131.1 10.2 127 46-179 68-206 (235)
51 1y8c_A S-adenosylmethionine-de 99.5 3.6E-13 1.2E-17 126.6 14.0 120 21-148 20-144 (246)
52 2fk8_A Methoxy mycolic acid sy 99.5 7.5E-14 2.6E-18 137.6 9.0 99 46-149 92-197 (318)
53 3ocj_A Putative exported prote 99.5 9.1E-14 3.1E-18 136.5 9.2 131 46-179 120-290 (305)
54 3bxo_A N,N-dimethyltransferase 99.5 3.4E-13 1.1E-17 126.5 12.4 96 46-147 42-142 (239)
55 3ofk_A Nodulation protein S; N 99.5 2.5E-13 8.4E-18 125.9 11.3 99 45-148 52-156 (216)
56 2gs9_A Hypothetical protein TT 99.5 2.3E-13 8E-18 125.6 10.6 97 46-149 38-135 (211)
57 3orh_A Guanidinoacetate N-meth 99.4 1.1E-13 3.9E-18 131.2 8.4 143 21-177 46-207 (236)
58 2zfu_A Nucleomethylin, cerebra 99.4 4.2E-13 1.4E-17 124.4 12.1 109 46-178 69-177 (215)
59 3g07_A 7SK snRNA methylphospha 99.4 2.6E-13 8.8E-18 132.8 10.5 133 45-178 47-267 (292)
60 3cc8_A Putative methyltransfer 99.4 2E-13 6.7E-18 126.9 9.3 130 45-180 33-185 (230)
61 2kw5_A SLR1183 protein; struct 99.4 3E-13 1E-17 124.0 10.1 128 47-179 32-170 (202)
62 1ri5_A MRNA capping enzyme; me 99.4 4.1E-13 1.4E-17 130.2 11.5 101 46-148 66-176 (298)
63 3bkx_A SAM-dependent methyltra 99.4 1.1E-12 3.7E-17 126.1 14.3 101 46-148 45-161 (275)
64 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.5E-17 120.8 14.9 125 46-179 43-181 (214)
65 3thr_A Glycine N-methyltransfe 99.4 1.5E-13 5E-18 133.5 8.0 102 46-148 59-177 (293)
66 2xvm_A Tellurite resistance pr 99.4 7.1E-13 2.4E-17 120.6 11.7 131 46-180 34-173 (199)
67 3g5t_A Trans-aconitate 3-methy 99.4 4.3E-13 1.5E-17 131.1 10.9 99 45-145 37-148 (299)
68 2vdw_A Vaccinia virus capping 99.4 5.2E-13 1.8E-17 131.6 11.2 101 46-148 50-171 (302)
69 2gb4_A Thiopurine S-methyltran 99.4 4.2E-13 1.4E-17 128.9 9.7 126 46-178 70-225 (252)
70 2avn_A Ubiquinone/menaquinone 99.4 2.9E-13 1E-17 129.6 8.0 98 46-149 56-155 (260)
71 2a14_A Indolethylamine N-methy 99.4 3.6E-13 1.2E-17 129.6 8.5 133 46-179 57-237 (263)
72 3e05_A Precorrin-6Y C5,15-meth 99.4 1.2E-11 4.2E-16 113.7 18.4 117 46-174 42-162 (204)
73 3grz_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.7E-17 120.8 10.8 144 14-178 36-183 (205)
74 2fca_A TRNA (guanine-N(7)-)-me 99.4 2.2E-12 7.5E-17 120.3 12.7 122 46-177 40-176 (213)
75 2p8j_A S-adenosylmethionine-de 99.4 8.7E-13 3E-17 121.3 9.7 101 46-148 25-130 (209)
76 3dmg_A Probable ribosomal RNA 99.4 6.6E-13 2.2E-17 135.0 9.5 103 46-150 235-344 (381)
77 1dus_A MJ0882; hypothetical pr 99.4 5.7E-12 1.9E-16 113.6 14.5 134 4-148 19-159 (194)
78 3p9n_A Possible methyltransfer 99.4 2E-12 6.7E-17 117.8 10.9 138 3-148 10-155 (189)
79 1zx0_A Guanidinoacetate N-meth 99.4 5.4E-13 1.8E-17 125.9 7.2 112 21-146 46-170 (236)
80 2pxx_A Uncharacterized protein 99.4 2.2E-12 7.4E-17 118.7 10.5 96 47-148 45-161 (215)
81 3eey_A Putative rRNA methylase 99.4 1.4E-12 4.7E-17 119.2 8.9 101 47-148 25-141 (197)
82 2g72_A Phenylethanolamine N-me 99.4 3.1E-13 1.1E-17 131.5 4.6 133 46-179 73-255 (289)
83 3d2l_A SAM-dependent methyltra 99.4 4.1E-12 1.4E-16 119.3 12.1 101 46-148 35-139 (243)
84 3njr_A Precorrin-6Y methylase; 99.3 2.3E-11 8E-16 112.6 16.8 118 46-178 57-178 (204)
85 3m33_A Uncharacterized protein 99.3 5.4E-13 1.8E-17 125.2 5.8 114 46-180 50-167 (226)
86 2i62_A Nicotinamide N-methyltr 99.3 9.1E-13 3.1E-17 125.5 7.2 129 45-179 57-238 (265)
87 1xdz_A Methyltransferase GIDB; 99.3 5.2E-12 1.8E-16 119.6 12.4 121 46-178 72-200 (240)
88 2yxd_A Probable cobalt-precorr 99.3 2.6E-11 9.1E-16 108.3 16.1 138 22-184 21-161 (183)
89 1wzn_A SAM-dependent methyltra 99.3 6.3E-12 2.1E-16 119.2 12.1 101 46-148 43-147 (252)
90 3lpm_A Putative methyltransfer 99.3 1.1E-12 3.6E-17 125.9 6.5 123 46-178 51-199 (259)
91 1nt2_A Fibrillarin-like PRE-rR 99.3 4.2E-12 1.4E-16 118.4 10.2 124 46-179 59-194 (210)
92 3mq2_A 16S rRNA methyltransfer 99.3 4.2E-12 1.4E-16 118.0 10.2 132 46-179 29-183 (218)
93 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.8E-11 6E-16 109.4 13.8 117 46-177 27-150 (178)
94 3evz_A Methyltransferase; NYSG 99.3 1E-11 3.5E-16 116.2 12.7 123 46-177 57-203 (230)
95 3m70_A Tellurite resistance pr 99.3 6E-12 2.1E-16 121.9 10.5 98 46-146 122-223 (286)
96 3bgv_A MRNA CAP guanine-N7 met 99.3 3.1E-12 1.1E-16 125.8 8.4 102 46-148 36-157 (313)
97 3i53_A O-methyltransferase; CO 99.3 3.4E-11 1.2E-15 119.4 15.7 129 45-178 170-319 (332)
98 3gwz_A MMCR; methyltransferase 99.3 4.1E-11 1.4E-15 121.0 15.9 130 45-178 203-354 (369)
99 2ipx_A RRNA 2'-O-methyltransfe 99.3 9.4E-12 3.2E-16 117.1 10.5 127 46-177 79-214 (233)
100 3dp7_A SAM-dependent methyltra 99.3 1E-11 3.5E-16 125.1 11.0 131 44-178 179-340 (363)
101 3q87_B N6 adenine specific DNA 99.3 1.1E-11 3.8E-16 111.4 10.1 113 47-179 26-148 (170)
102 3fpf_A Mtnas, putative unchara 99.3 2E-11 6.9E-16 119.4 12.7 115 23-148 106-224 (298)
103 4df3_A Fibrillarin-like rRNA/T 99.3 6.2E-12 2.1E-16 119.2 8.5 133 38-178 74-215 (233)
104 3dxy_A TRNA (guanine-N(7)-)-me 99.3 4E-12 1.4E-16 119.3 7.0 122 45-176 35-173 (218)
105 3p2e_A 16S rRNA methylase; met 99.3 2.9E-12 1E-16 120.8 5.8 135 46-180 26-185 (225)
106 2ld4_A Anamorsin; methyltransf 99.3 8.2E-12 2.8E-16 112.2 8.4 115 39-175 10-130 (176)
107 2ip2_A Probable phenazine-spec 99.3 1.1E-10 3.8E-15 115.6 17.4 129 46-178 169-320 (334)
108 3htx_A HEN1; HEN1, small RNA m 99.3 2.6E-11 8.8E-16 131.8 13.6 117 22-148 707-836 (950)
109 2nxc_A L11 mtase, ribosomal pr 99.3 1.6E-11 5.5E-16 117.7 10.8 119 46-178 122-242 (254)
110 2pwy_A TRNA (adenine-N(1)-)-me 99.3 2.6E-11 8.8E-16 115.2 12.0 119 46-178 98-222 (258)
111 2frn_A Hypothetical protein PH 99.3 2.9E-11 9.8E-16 117.5 12.2 151 7-176 98-253 (278)
112 1l3i_A Precorrin-6Y methyltran 99.3 5E-11 1.7E-15 107.2 13.0 116 46-175 35-155 (192)
113 3hp7_A Hemolysin, putative; st 99.2 1.1E-10 3.6E-15 114.2 16.0 124 45-177 86-229 (291)
114 3g89_A Ribosomal RNA small sub 99.2 4.3E-11 1.5E-15 114.5 12.9 122 45-178 81-210 (249)
115 3ggd_A SAM-dependent methyltra 99.2 4.6E-12 1.6E-16 119.7 6.0 97 46-148 58-165 (245)
116 1qzz_A RDMB, aclacinomycin-10- 99.2 5.2E-11 1.8E-15 119.8 13.9 129 45-178 183-337 (374)
117 4dcm_A Ribosomal RNA large sub 99.2 4.3E-12 1.5E-16 128.7 5.8 101 46-149 224-337 (375)
118 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.8E-11 9.6E-16 114.8 11.1 122 46-176 48-191 (235)
119 1x19_A CRTF-related protein; m 99.2 7E-11 2.4E-15 118.6 14.4 130 45-178 191-346 (359)
120 3id6_C Fibrillarin-like rRNA/T 99.2 3.5E-11 1.2E-15 114.1 11.5 130 38-178 73-214 (232)
121 1yb2_A Hypothetical protein TA 99.2 1.8E-11 6.1E-16 118.4 9.6 117 46-178 112-235 (275)
122 3opn_A Putative hemolysin; str 99.2 6.2E-12 2.1E-16 119.3 5.9 125 45-178 38-182 (232)
123 2fyt_A Protein arginine N-meth 99.2 3.7E-11 1.2E-15 120.2 11.9 97 46-144 66-169 (340)
124 1fbn_A MJ fibrillarin homologu 99.2 3.7E-11 1.3E-15 112.9 11.3 123 46-178 76-211 (230)
125 2r3s_A Uncharacterized protein 99.2 2.3E-11 7.9E-16 120.3 10.3 129 46-178 167-321 (335)
126 2pjd_A Ribosomal RNA small sub 99.2 4.5E-12 1.5E-16 126.8 4.9 99 47-149 199-306 (343)
127 1ej0_A FTSJ; methyltransferase 99.2 4.8E-11 1.7E-15 105.5 11.0 91 46-148 24-138 (180)
128 3q7e_A Protein arginine N-meth 99.2 2.7E-11 9.4E-16 121.5 10.4 97 46-144 68-171 (349)
129 3lbf_A Protein-L-isoaspartate 99.2 4.4E-11 1.5E-15 110.2 10.8 96 46-148 79-176 (210)
130 2ift_A Putative methylase HI07 99.2 1.2E-11 4.1E-16 114.2 6.8 134 5-149 22-166 (201)
131 3mcz_A O-methyltransferase; ad 99.2 7.3E-11 2.5E-15 117.8 13.0 130 45-177 180-336 (352)
132 3iv6_A Putative Zn-dependent a 99.2 2.8E-11 9.7E-16 116.7 9.4 95 46-148 47-150 (261)
133 3lst_A CALO1 methyltransferase 99.2 3.6E-11 1.2E-15 120.3 10.5 125 45-178 185-334 (348)
134 1p91_A Ribosomal RNA large sub 99.2 1.5E-11 5.1E-16 117.9 7.3 91 46-149 87-181 (269)
135 1tw3_A COMT, carminomycin 4-O- 99.2 1.9E-10 6.6E-15 115.1 15.2 130 45-179 184-338 (360)
136 2fhp_A Methylase, putative; al 99.2 3.6E-11 1.2E-15 108.2 8.7 135 4-149 12-157 (187)
137 3uwp_A Histone-lysine N-methyl 99.2 3.9E-11 1.3E-15 122.0 9.8 123 16-148 153-290 (438)
138 2qe6_A Uncharacterized protein 99.2 9.9E-11 3.4E-15 113.6 12.1 102 45-149 78-199 (274)
139 3mb5_A SAM-dependent methyltra 99.2 8.8E-11 3E-15 111.6 11.4 116 46-177 95-219 (255)
140 1jsx_A Glucose-inhibited divis 99.2 7.6E-11 2.6E-15 108.3 10.5 114 46-177 67-185 (207)
141 2b3t_A Protein methyltransfera 99.2 1.8E-10 6.1E-15 111.3 13.4 119 46-175 111-258 (276)
142 4dzr_A Protein-(glutamine-N5) 99.2 1.2E-11 4.2E-16 113.4 4.6 120 46-177 32-189 (215)
143 3bwc_A Spermidine synthase; SA 99.2 1.1E-10 3.8E-15 114.9 11.4 128 45-177 96-237 (304)
144 2fpo_A Methylase YHHF; structu 99.2 5.3E-11 1.8E-15 109.9 8.4 134 4-148 22-162 (202)
145 1af7_A Chemotaxis receptor met 99.2 6.5E-11 2.2E-15 115.0 9.2 97 46-148 107-254 (274)
146 1ws6_A Methyltransferase; stru 99.2 2E-11 6.9E-16 108.2 5.0 132 5-149 11-150 (171)
147 3r0q_C Probable protein argini 99.2 1.3E-10 4.4E-15 117.8 11.6 97 46-146 65-169 (376)
148 1i9g_A Hypothetical protein RV 99.1 1.2E-10 4.1E-15 112.2 9.9 115 47-175 102-225 (280)
149 3bzb_A Uncharacterized protein 99.1 4.3E-10 1.5E-14 109.3 13.9 129 46-178 81-235 (281)
150 3reo_A (ISO)eugenol O-methyltr 99.1 1.9E-10 6.7E-15 116.0 11.8 123 45-178 204-353 (368)
151 3fzg_A 16S rRNA methylase; met 99.1 4.2E-11 1.4E-15 109.6 5.6 98 45-145 50-151 (200)
152 1g6q_1 HnRNP arginine N-methyl 99.1 2E-10 7E-15 114.1 10.9 97 46-144 40-143 (328)
153 3sso_A Methyltransferase; macr 99.1 5.3E-11 1.8E-15 120.6 6.1 93 45-148 217-326 (419)
154 1ixk_A Methyltransferase; open 99.1 2.7E-10 9.4E-15 112.6 10.8 126 46-177 120-272 (315)
155 1dl5_A Protein-L-isoaspartate 99.1 3.4E-10 1.2E-14 111.8 11.5 95 46-148 77-177 (317)
156 3adn_A Spermidine synthase; am 99.1 3.8E-10 1.3E-14 110.7 11.7 107 45-152 84-204 (294)
157 1o54_A SAM-dependent O-methylt 99.1 2.8E-10 9.7E-15 109.9 10.5 117 46-178 114-237 (277)
158 2plw_A Ribosomal RNA methyltra 99.1 2.8E-10 9.7E-15 103.9 10.0 90 46-147 24-155 (201)
159 2vdv_E TRNA (guanine-N(7)-)-me 99.1 4.1E-10 1.4E-14 106.9 11.4 101 46-147 51-174 (246)
160 1vbf_A 231AA long hypothetical 99.1 2.1E-10 7E-15 107.3 9.1 91 46-148 72-167 (231)
161 3tma_A Methyltransferase; thum 99.1 9.5E-10 3.2E-14 110.2 14.4 119 46-177 205-336 (354)
162 3p9c_A Caffeic acid O-methyltr 99.1 4.6E-10 1.6E-14 113.2 12.1 123 45-178 202-351 (364)
163 1fp1_D Isoliquiritigenin 2'-O- 99.1 5.7E-11 1.9E-15 119.9 5.4 123 45-178 210-358 (372)
164 3tfw_A Putative O-methyltransf 99.1 1.5E-09 5.2E-14 103.3 15.1 98 46-148 65-172 (248)
165 2y1w_A Histone-arginine methyl 99.1 3.7E-10 1.3E-14 113.2 11.0 98 46-146 52-155 (348)
166 2ozv_A Hypothetical protein AT 99.1 3.6E-10 1.2E-14 108.6 10.3 116 46-176 38-190 (260)
167 2yxe_A Protein-L-isoaspartate 99.1 5.8E-10 2E-14 103.0 11.3 96 46-148 79-179 (215)
168 1u2z_A Histone-lysine N-methyl 99.1 3.8E-10 1.3E-14 116.2 10.9 100 46-147 244-360 (433)
169 2esr_A Methyltransferase; stru 99.1 7.5E-11 2.6E-15 105.7 5.0 121 19-149 13-141 (177)
170 2bm8_A Cephalosporin hydroxyla 99.1 3.5E-10 1.2E-14 107.2 9.5 116 46-175 83-214 (236)
171 1g8a_A Fibrillarin-like PRE-rR 99.1 5.3E-10 1.8E-14 104.4 10.5 125 46-178 75-210 (227)
172 3gdh_A Trimethylguanosine synt 99.1 9.8E-12 3.3E-16 117.3 -1.5 97 46-145 80-180 (241)
173 3u81_A Catechol O-methyltransf 99.1 2.9E-10 1E-14 106.0 8.4 100 46-148 60-172 (221)
174 1fp2_A Isoflavone O-methyltran 99.0 1.7E-10 6E-15 115.4 6.8 122 46-178 190-339 (352)
175 1jg1_A PIMT;, protein-L-isoasp 99.0 7.5E-10 2.6E-14 104.2 10.7 95 47-149 94-192 (235)
176 2igt_A SAM dependent methyltra 99.0 8.3E-10 2.8E-14 110.1 11.4 127 46-175 155-299 (332)
177 1xj5_A Spermidine synthase 1; 99.0 6.3E-10 2.2E-14 111.0 10.4 106 45-151 121-240 (334)
178 1r18_A Protein-L-isoaspartate( 99.0 5.8E-10 2E-14 104.3 9.5 94 47-148 87-196 (227)
179 2wa2_A Non-structural protein 99.0 7E-10 2.4E-14 107.8 10.3 97 47-148 85-195 (276)
180 3ntv_A MW1564 protein; rossman 99.0 3.6E-10 1.2E-14 106.4 7.9 97 46-147 73-177 (232)
181 2yvl_A TRMI protein, hypotheti 99.0 1.7E-09 5.9E-14 101.8 12.5 116 46-177 93-212 (248)
182 1i1n_A Protein-L-isoaspartate 99.0 6.6E-10 2.3E-14 103.6 9.3 95 47-148 80-184 (226)
183 1o9g_A RRNA methyltransferase; 99.0 3.7E-10 1.3E-14 107.4 7.6 103 46-148 53-216 (250)
184 4a6d_A Hydroxyindole O-methylt 99.0 2.6E-09 8.8E-14 107.2 13.9 125 45-178 180-332 (353)
185 3dr5_A Putative O-methyltransf 99.0 6.2E-10 2.1E-14 104.5 8.8 96 47-147 59-164 (221)
186 2oxt_A Nucleoside-2'-O-methylt 99.0 1.6E-09 5.4E-14 104.7 11.6 97 47-148 77-187 (265)
187 3lec_A NADB-rossmann superfami 99.0 2.8E-09 9.6E-14 100.7 13.0 118 47-178 24-147 (230)
188 3c3p_A Methyltransferase; NP_9 99.0 5.5E-10 1.9E-14 103.1 7.7 96 46-147 58-161 (210)
189 2pbf_A Protein-L-isoaspartate 99.0 4.4E-10 1.5E-14 104.8 7.0 96 46-148 82-195 (227)
190 3a27_A TYW2, uncharacterized p 99.0 1.2E-09 4.1E-14 105.7 10.3 96 46-148 121-221 (272)
191 3gnl_A Uncharacterized protein 99.0 3.1E-09 1.1E-13 101.2 12.8 118 47-178 24-147 (244)
192 2nyu_A Putative ribosomal RNA 99.0 1E-09 3.5E-14 99.6 8.9 92 46-148 24-147 (196)
193 3duw_A OMT, O-methyltransferas 99.0 9.1E-10 3.1E-14 102.4 8.5 98 46-148 60-169 (223)
194 3r3h_A O-methyltransferase, SA 99.0 1.2E-09 4.1E-14 103.9 9.0 98 46-148 62-172 (242)
195 4azs_A Methyltransferase WBDD; 99.0 2.9E-10 1E-14 121.3 4.9 100 45-146 67-173 (569)
196 3ajd_A Putative methyltransfer 99.0 1.5E-09 5E-14 105.1 9.5 125 46-176 85-237 (274)
197 2p41_A Type II methyltransfera 99.0 5.5E-10 1.9E-14 110.1 6.4 97 47-148 85-193 (305)
198 2b25_A Hypothetical protein; s 98.9 1.1E-09 3.9E-14 108.7 8.5 97 46-148 107-221 (336)
199 2yxl_A PH0851 protein, 450AA l 98.9 2.6E-09 9E-14 110.7 11.4 125 46-176 261-415 (450)
200 3kr9_A SAM-dependent methyltra 98.9 6.5E-09 2.2E-13 97.9 13.0 117 47-178 18-141 (225)
201 3tr6_A O-methyltransferase; ce 98.9 6.9E-10 2.4E-14 103.3 6.2 98 46-148 66-176 (225)
202 3dou_A Ribosomal RNA large sub 98.9 2.5E-09 8.7E-14 98.0 9.3 112 46-177 27-161 (191)
203 2o07_A Spermidine synthase; st 98.9 2.1E-09 7.1E-14 105.8 9.4 105 45-150 96-213 (304)
204 3b3j_A Histone-arginine methyl 98.9 2.1E-09 7.3E-14 112.3 9.6 96 46-145 160-262 (480)
205 1inl_A Spermidine synthase; be 98.9 2.1E-09 7.1E-14 105.4 8.9 104 46-150 92-209 (296)
206 1uir_A Polyamine aminopropyltr 98.9 9.6E-10 3.3E-14 108.7 6.3 103 45-148 78-197 (314)
207 2b78_A Hypothetical protein SM 98.9 5.3E-09 1.8E-13 106.3 11.9 126 46-175 214-357 (385)
208 2qm3_A Predicted methyltransfe 98.9 9.8E-09 3.4E-13 103.7 13.8 127 45-179 173-308 (373)
209 1zg3_A Isoflavanone 4'-O-methy 98.9 1.5E-09 5E-14 108.9 7.5 122 46-178 195-345 (358)
210 4hc4_A Protein arginine N-meth 98.9 3.9E-09 1.3E-13 106.8 10.6 96 46-144 85-187 (376)
211 3tm4_A TRNA (guanine N2-)-meth 98.9 8.4E-09 2.9E-13 104.3 12.9 118 46-177 219-349 (373)
212 2b2c_A Spermidine synthase; be 98.9 9.5E-10 3.2E-14 108.8 5.8 100 45-150 109-226 (314)
213 1iy9_A Spermidine synthase; ro 98.9 2.3E-09 7.8E-14 104.0 8.4 121 45-170 76-209 (275)
214 3giw_A Protein of unknown func 98.9 7E-10 2.4E-14 107.3 4.7 104 44-148 78-202 (277)
215 2gpy_A O-methyltransferase; st 98.9 1.5E-09 5.1E-14 101.9 6.5 97 46-147 56-161 (233)
216 2i7c_A Spermidine synthase; tr 98.9 3.2E-09 1.1E-13 103.4 8.4 100 45-150 79-196 (283)
217 2pt6_A Spermidine synthase; tr 98.9 1.8E-09 6.3E-14 107.0 6.6 100 45-150 117-234 (321)
218 1mjf_A Spermidine synthase; sp 98.9 2.4E-09 8.2E-14 104.1 7.2 102 45-149 76-196 (281)
219 2hnk_A SAM-dependent O-methylt 98.9 8.5E-09 2.9E-13 97.2 10.4 97 46-147 62-182 (239)
220 1sqg_A SUN protein, FMU protei 98.8 1.4E-08 4.6E-13 104.6 12.5 124 46-175 248-399 (429)
221 3cbg_A O-methyltransferase; cy 98.8 4.1E-09 1.4E-13 99.2 7.9 98 46-148 74-184 (232)
222 2h00_A Methyltransferase 10 do 98.8 5E-09 1.7E-13 99.5 8.4 99 45-144 66-190 (254)
223 3k6r_A Putative transferase PH 98.8 1.3E-08 4.3E-13 98.9 11.3 152 7-177 98-254 (278)
224 1sui_A Caffeoyl-COA O-methyltr 98.8 3E-09 1E-13 101.4 6.4 97 45-146 80-190 (247)
225 3gjy_A Spermidine synthase; AP 98.8 1.9E-09 6.6E-14 106.5 5.1 96 46-147 91-201 (317)
226 4dmg_A Putative uncharacterize 98.8 2.4E-08 8.1E-13 101.8 12.9 123 46-172 216-349 (393)
227 1wy7_A Hypothetical protein PH 98.8 6.3E-08 2.2E-12 88.6 14.4 118 46-178 51-173 (207)
228 1ne2_A Hypothetical protein TA 98.8 2.2E-08 7.5E-13 91.4 11.2 108 46-175 53-165 (200)
229 3lcv_B Sisomicin-gentamicin re 98.8 1.2E-08 4.2E-13 97.5 9.4 128 45-176 133-268 (281)
230 2cmg_A Spermidine synthase; tr 98.8 7.6E-09 2.6E-13 99.7 8.2 93 45-149 73-174 (262)
231 1wxx_A TT1595, hypothetical pr 98.8 6.9E-09 2.4E-13 105.2 8.3 123 46-172 211-348 (382)
232 2avd_A Catechol-O-methyltransf 98.8 1.4E-08 4.9E-13 94.5 9.7 97 46-147 71-180 (229)
233 3v97_A Ribosomal RNA large sub 98.8 1.7E-08 5.8E-13 110.2 11.6 119 46-174 541-676 (703)
234 3c0k_A UPF0064 protein YCCW; P 98.8 2.2E-08 7.5E-13 101.9 11.7 123 46-172 222-362 (396)
235 3m6w_A RRNA methylase; rRNA me 98.8 6E-09 2E-13 108.2 7.3 126 46-177 103-256 (464)
236 2xyq_A Putative 2'-O-methyl tr 98.8 2.2E-08 7.6E-13 97.8 10.9 114 38-177 60-194 (290)
237 2frx_A Hypothetical protein YE 98.8 1.7E-08 5.8E-13 105.4 10.5 104 46-150 119-250 (479)
238 2as0_A Hypothetical protein PH 98.8 1.7E-08 5.9E-13 102.7 9.7 124 46-173 219-359 (396)
239 1nv8_A HEMK protein; class I a 98.8 1.2E-08 4.3E-13 99.2 8.0 98 47-147 126-250 (284)
240 2yx1_A Hypothetical protein MJ 98.7 4.6E-08 1.6E-12 97.5 11.8 93 46-148 197-293 (336)
241 3m4x_A NOL1/NOP2/SUN family pr 98.7 1.5E-08 5E-13 105.1 7.8 126 46-177 107-260 (456)
242 3c3y_A Pfomt, O-methyltransfer 98.7 1.2E-08 4E-13 96.5 6.2 96 46-146 72-181 (237)
243 3frh_A 16S rRNA methylase; met 98.7 2.2E-08 7.4E-13 94.8 7.8 131 44-177 105-239 (253)
244 2f8l_A Hypothetical protein LM 98.7 4.7E-08 1.6E-12 97.5 9.7 120 46-172 132-278 (344)
245 1uwv_A 23S rRNA (uracil-5-)-me 98.7 3.5E-07 1.2E-11 94.2 16.4 117 46-177 288-411 (433)
246 1zq9_A Probable dimethyladenos 98.7 6.1E-08 2.1E-12 94.3 10.1 109 23-143 15-144 (285)
247 2ih2_A Modification methylase 98.6 2E-07 6.8E-12 94.9 12.2 113 46-172 41-186 (421)
248 2h1r_A Dimethyladenosine trans 98.6 1.4E-07 4.9E-12 92.4 10.1 69 46-116 44-114 (299)
249 2jjq_A Uncharacterized RNA met 98.6 4.9E-07 1.7E-11 93.0 13.5 95 46-147 292-388 (425)
250 3evf_A RNA-directed RNA polyme 98.5 1.1E-06 3.7E-11 84.4 12.3 100 47-149 77-187 (277)
251 1yub_A Ermam, rRNA methyltrans 98.4 2.3E-09 7.9E-14 101.8 -7.0 99 46-147 31-146 (245)
252 3b5i_A S-adenosyl-L-methionine 98.4 4.8E-07 1.6E-11 91.3 9.5 102 45-147 53-226 (374)
253 2okc_A Type I restriction enzy 98.4 5.5E-07 1.9E-11 93.0 10.1 101 46-148 173-309 (445)
254 3gru_A Dimethyladenosine trans 98.4 8.9E-07 3E-11 86.6 9.8 92 14-116 29-122 (295)
255 2qfm_A Spermine synthase; sper 98.4 1.9E-07 6.6E-12 93.4 4.7 101 44-149 188-317 (364)
256 2b9e_A NOL1/NOP2/SUN domain fa 98.3 3.8E-06 1.3E-10 82.7 12.4 101 47-149 105-237 (309)
257 1qam_A ERMC' methyltransferase 98.3 1.3E-06 4.3E-11 83.0 7.7 65 46-116 32-102 (244)
258 3k0b_A Predicted N6-adenine-sp 98.2 8.3E-06 2.8E-10 82.9 12.2 101 46-148 203-352 (393)
259 4gqb_A Protein arginine N-meth 98.2 2.5E-06 8.4E-11 91.4 8.6 119 21-143 334-464 (637)
260 3ldu_A Putative methylase; str 98.2 5.6E-06 1.9E-10 83.9 10.9 101 46-148 197-346 (385)
261 3bt7_A TRNA (uracil-5-)-methyl 98.2 2.1E-06 7.1E-11 86.5 6.8 94 46-147 215-327 (369)
262 2efj_A 3,7-dimethylxanthine me 98.1 4.4E-06 1.5E-10 84.5 8.8 103 45-148 53-227 (384)
263 3ldg_A Putative uncharacterize 98.1 1.8E-05 6.1E-10 80.2 13.0 101 46-148 196-345 (384)
264 3tqs_A Ribosomal RNA small sub 98.1 4.5E-06 1.5E-10 79.9 7.5 90 14-115 8-103 (255)
265 3fut_A Dimethyladenosine trans 98.1 7.5E-06 2.6E-10 79.1 8.8 91 13-116 25-118 (271)
266 2ar0_A M.ecoki, type I restric 98.1 4E-06 1.4E-10 88.7 6.8 103 46-149 171-315 (541)
267 2dul_A N(2),N(2)-dimethylguano 98.0 3.3E-06 1.1E-10 85.4 4.5 95 47-146 50-164 (378)
268 3axs_A Probable N(2),N(2)-dime 97.9 5.1E-06 1.7E-10 84.4 4.9 95 46-146 54-158 (392)
269 2qy6_A UPF0209 protein YFCK; s 97.9 1.7E-05 5.7E-10 76.0 8.2 123 45-179 61-234 (257)
270 3ua3_A Protein arginine N-meth 97.9 9E-06 3.1E-10 87.3 6.3 98 45-143 410-531 (745)
271 1m6e_X S-adenosyl-L-methionnin 97.9 7.2E-06 2.5E-10 82.2 4.5 101 46-147 53-210 (359)
272 3gcz_A Polyprotein; flavivirus 97.8 1.1E-05 3.8E-10 77.5 4.3 104 39-148 88-203 (282)
273 3o4f_A Spermidine synthase; am 97.8 9.3E-05 3.2E-09 72.0 10.8 113 43-156 82-208 (294)
274 4auk_A Ribosomal RNA large sub 97.8 0.00018 6.2E-09 72.0 13.0 120 39-173 209-333 (375)
275 2r6z_A UPF0341 protein in RSP 97.8 3.3E-06 1.1E-10 81.0 0.1 71 46-117 85-170 (258)
276 3uzu_A Ribosomal RNA small sub 97.8 4.4E-05 1.5E-09 74.0 7.6 80 13-105 20-105 (279)
277 3eld_A Methyltransferase; flav 97.7 6.6E-05 2.3E-09 72.6 8.5 120 16-148 62-193 (300)
278 3ftd_A Dimethyladenosine trans 97.7 7.4E-05 2.5E-09 71.1 8.4 79 14-106 10-92 (249)
279 3v97_A Ribosomal RNA large sub 97.7 0.00018 6E-09 78.5 12.3 119 290-410 541-676 (703)
280 3khk_A Type I restriction-modi 97.6 6.8E-05 2.3E-09 79.3 7.3 102 47-149 247-398 (544)
281 3lkd_A Type I restriction-modi 97.6 0.0001 3.4E-09 77.9 8.6 121 24-149 205-361 (542)
282 3e8s_A Putative SAM dependent 97.5 0.00029 1E-08 64.2 9.5 137 289-434 53-226 (227)
283 1m6y_A S-adenosyl-methyltransf 97.5 3.6E-05 1.2E-09 75.4 3.4 69 47-116 29-106 (301)
284 3s1s_A Restriction endonucleas 97.5 0.0002 6.8E-09 78.2 9.2 105 46-150 323-469 (878)
285 3ll7_A Putative methyltransfer 97.5 4.5E-05 1.5E-09 77.7 3.8 70 46-115 95-170 (410)
286 3cvo_A Methyltransferase-like 97.5 0.0004 1.4E-08 63.9 9.7 90 46-144 32-152 (202)
287 2px2_A Genome polyprotein [con 97.4 0.00052 1.8E-08 65.1 9.1 103 39-148 71-185 (269)
288 2oyr_A UPF0341 protein YHIQ; a 97.4 9.6E-05 3.3E-09 70.7 3.9 93 46-140 90-194 (258)
289 1qyr_A KSGA, high level kasuga 97.4 0.00021 7.2E-09 68.1 6.2 64 47-116 24-98 (252)
290 2k4m_A TR8_protein, UPF0146 pr 97.4 0.00032 1.1E-08 61.1 6.6 77 47-145 38-120 (153)
291 4fzv_A Putative methyltransfer 97.3 4.7E-05 1.6E-09 76.3 1.5 110 38-151 145-289 (359)
292 2wk1_A NOVP; transferase, O-me 97.3 0.0031 1.1E-07 60.9 13.7 134 45-187 107-281 (282)
293 2zfu_A Nucleomethylin, cerebra 97.3 0.0032 1.1E-07 57.2 13.0 121 289-435 68-191 (215)
294 1kpg_A CFA synthase;, cyclopro 97.2 0.00021 7E-09 68.5 4.2 99 288-391 64-168 (287)
295 3jwg_A HEN1, methyltransferase 97.2 0.0018 6.2E-08 59.1 10.1 160 267-435 12-210 (219)
296 3pfg_A N-methyltransferase; N, 97.1 0.0014 4.8E-08 61.7 9.2 116 268-390 32-150 (263)
297 1y8c_A S-adenosylmethionine-de 97.1 0.0017 5.8E-08 59.9 8.9 96 289-389 38-140 (246)
298 1xtp_A LMAJ004091AAA; SGPP, st 97.0 0.00033 1.1E-08 65.4 3.7 124 284-411 89-233 (254)
299 3lkz_A Non-structural protein 97.0 0.0017 5.7E-08 62.7 8.2 103 39-150 92-208 (321)
300 2xvm_A Tellurite resistance pr 97.0 0.00058 2E-08 61.1 4.8 114 290-411 34-168 (199)
301 3cgg_A SAM-dependent methyltra 96.9 0.0014 4.9E-08 57.9 7.0 141 290-435 48-195 (195)
302 4dcm_A Ribosomal RNA large sub 96.9 0.0015 5.2E-08 65.7 7.6 96 47-147 41-137 (375)
303 3p8z_A Mtase, non-structural p 96.9 0.0019 6.5E-08 60.4 7.5 102 39-150 76-190 (267)
304 3ocj_A Putative exported prote 96.8 0.0032 1.1E-07 60.9 8.9 153 271-435 103-304 (305)
305 3bxo_A N,N-dimethyltransferase 96.8 0.0024 8.1E-08 58.8 7.5 117 267-390 21-140 (239)
306 3d2l_A SAM-dependent methyltra 96.8 0.0031 1.1E-07 58.1 8.4 94 290-389 35-135 (243)
307 3hem_A Cyclopropane-fatty-acyl 96.8 0.00057 2E-08 66.0 3.2 97 288-391 72-183 (302)
308 3ofk_A Nodulation protein S; N 96.7 0.0014 4.8E-08 59.6 5.4 104 283-391 46-154 (216)
309 3ufb_A Type I restriction-modi 96.7 0.0085 2.9E-07 63.0 11.9 119 22-148 203-364 (530)
310 2p7i_A Hypothetical protein; p 96.7 0.0023 7.9E-08 58.9 6.7 93 291-391 45-141 (250)
311 3e23_A Uncharacterized protein 96.7 0.0011 3.6E-08 60.3 4.1 115 290-411 45-177 (211)
312 4e2x_A TCAB9; kijanose, tetron 96.7 0.00047 1.6E-08 69.9 1.8 140 265-411 84-248 (416)
313 3lcc_A Putative methyl chlorid 96.7 0.0056 1.9E-07 56.4 9.1 137 290-433 68-224 (235)
314 3dlc_A Putative S-adenosyl-L-m 96.7 0.0061 2.1E-07 54.9 9.1 95 291-391 46-148 (219)
315 3mgg_A Methyltransferase; NYSG 96.7 0.001 3.5E-08 63.0 4.0 99 287-391 36-142 (276)
316 3hp7_A Hemolysin, putative; st 96.7 0.0052 1.8E-07 59.7 9.0 134 290-435 87-250 (291)
317 2fk8_A Methoxy mycolic acid sy 96.6 0.001 3.5E-08 64.6 3.9 99 288-391 90-194 (318)
318 3dli_A Methyltransferase; PSI- 96.6 0.0007 2.4E-08 63.0 2.5 93 290-391 43-140 (240)
319 3kkz_A Uncharacterized protein 96.6 0.0015 5E-08 61.8 4.8 115 289-410 47-190 (267)
320 4hg2_A Methyltransferase type 96.6 0.00092 3.2E-08 63.7 3.2 92 290-389 41-133 (257)
321 1vl5_A Unknown conserved prote 96.5 0.0023 7.8E-08 60.1 5.5 98 287-391 36-140 (260)
322 2ex4_A Adrenal gland protein A 96.5 0.003 1E-07 58.6 6.2 120 288-411 79-220 (241)
323 2o57_A Putative sarcosine dime 96.5 0.0022 7.6E-08 61.5 5.5 96 289-391 83-187 (297)
324 3bus_A REBM, methyltransferase 96.5 0.0024 8.1E-08 60.3 5.6 98 288-391 61-166 (273)
325 3h2b_A SAM-dependent methyltra 96.5 0.0029 1E-07 56.9 5.9 118 290-412 43-178 (203)
326 3dmg_A Probable ribosomal RNA 96.5 0.0075 2.6E-07 60.7 9.4 100 289-391 234-340 (381)
327 3i9f_A Putative type 11 methyl 96.5 0.0049 1.7E-07 53.7 7.2 129 288-436 17-161 (170)
328 2yqz_A Hypothetical protein TT 96.5 0.0033 1.1E-07 58.8 6.2 96 288-390 39-140 (263)
329 3ege_A Putative methyltransfer 96.5 0.0026 8.8E-08 60.1 5.5 97 287-391 33-130 (261)
330 3grz_A L11 mtase, ribosomal pr 96.5 0.0076 2.6E-07 54.3 8.5 113 290-411 62-180 (205)
331 1xxl_A YCGJ protein; structura 96.4 0.0028 9.4E-08 59.0 5.2 98 287-391 20-124 (239)
332 1nkv_A Hypothetical protein YJ 96.4 0.0018 6E-08 60.5 3.9 95 289-391 37-140 (256)
333 3f4k_A Putative methyltransfer 96.4 0.001 3.6E-08 62.1 2.2 113 290-410 48-190 (257)
334 3hm2_A Precorrin-6Y C5,15-meth 96.4 0.011 3.8E-07 51.5 8.7 115 287-411 24-148 (178)
335 3gu3_A Methyltransferase; alph 96.4 0.0025 8.4E-08 61.0 4.6 101 287-393 21-128 (284)
336 3hnr_A Probable methyltransfer 96.3 0.0057 1.9E-07 55.6 6.5 119 288-412 45-197 (220)
337 3cc8_A Putative methyltransfer 96.3 0.0038 1.3E-07 56.8 5.3 97 287-391 31-130 (230)
338 1dus_A MJ0882; hypothetical pr 96.3 0.004 1.4E-07 54.9 5.2 115 288-410 52-177 (194)
339 3ccf_A Cyclopropane-fatty-acyl 96.3 0.0039 1.3E-07 59.3 5.4 95 288-390 57-153 (279)
340 3dh0_A SAM dependent methyltra 96.3 0.0037 1.3E-07 56.8 5.0 134 289-435 38-193 (219)
341 1vlm_A SAM-dependent methyltra 96.3 0.0065 2.2E-07 55.5 6.7 111 289-411 48-183 (219)
342 3ujc_A Phosphoethanolamine N-m 96.3 0.0019 6.6E-08 60.4 3.1 102 285-391 52-159 (266)
343 3l8d_A Methyltransferase; stru 96.2 0.0042 1.5E-07 57.3 5.3 115 290-411 55-195 (242)
344 3g5l_A Putative S-adenosylmeth 96.2 0.0035 1.2E-07 58.5 4.7 103 282-390 38-144 (253)
345 2gs9_A Hypothetical protein TT 96.2 0.0042 1.4E-07 56.2 5.0 95 288-391 36-132 (211)
346 3thr_A Glycine N-methyltransfe 96.2 0.00086 2.9E-08 64.2 0.3 100 288-391 57-175 (293)
347 3e05_A Precorrin-6Y C5,15-meth 96.2 0.0065 2.2E-07 54.8 6.2 144 256-413 11-165 (204)
348 3ou2_A SAM-dependent methyltra 96.1 0.0034 1.2E-07 56.8 4.0 96 290-392 48-147 (218)
349 3c6k_A Spermine synthase; sper 96.1 0.0044 1.5E-07 62.2 5.1 103 45-149 206-334 (381)
350 4htf_A S-adenosylmethionine-de 96.1 0.0057 1.9E-07 58.3 5.6 95 290-391 70-173 (285)
351 2avn_A Ubiquinone/menaquinone 96.1 0.008 2.8E-07 56.5 6.6 98 288-391 54-152 (260)
352 3evz_A Methyltransferase; NYSG 96.1 0.013 4.5E-07 53.6 7.7 138 290-434 57-219 (230)
353 3bkw_A MLL3908 protein, S-aden 96.0 0.0055 1.9E-07 56.5 4.9 99 287-391 42-144 (243)
354 2g72_A Phenylethanolamine N-me 96.0 0.011 3.9E-07 56.4 7.3 64 348-411 172-251 (289)
355 3ntv_A MW1564 protein; rossman 96.0 0.0076 2.6E-07 55.9 5.8 92 289-389 72-174 (232)
356 3sm3_A SAM-dependent methyltra 96.0 0.0046 1.6E-07 56.5 4.3 98 290-391 32-141 (235)
357 3eey_A Putative rRNA methylase 96.0 0.0077 2.6E-07 53.8 5.6 140 291-436 25-189 (197)
358 2ld4_A Anamorsin; methyltransf 96.0 0.004 1.4E-07 54.8 3.6 92 348-443 61-176 (176)
359 2yxd_A Probable cobalt-precorr 96.0 0.0046 1.6E-07 54.1 3.9 109 290-413 37-154 (183)
360 1l3i_A Precorrin-6Y methyltran 96.0 0.0056 1.9E-07 53.8 4.5 114 289-413 34-157 (192)
361 1xdz_A Methyltransferase GIDB; 96.0 0.03 1E-06 51.9 9.8 138 289-439 71-223 (240)
362 1jsx_A Glucose-inhibited divis 95.9 0.0063 2.1E-07 54.8 4.7 129 290-435 67-205 (207)
363 3mti_A RRNA methylase; SAM-dep 95.9 0.01 3.4E-07 52.5 5.9 138 290-434 24-183 (185)
364 4dzr_A Protein-(glutamine-N5) 95.9 0.0072 2.5E-07 54.2 5.0 140 288-435 30-205 (215)
365 2i62_A Nicotinamide N-methyltr 95.9 0.013 4.4E-07 54.7 6.9 123 287-411 55-234 (265)
366 1ve3_A Hypothetical protein PH 95.9 0.0091 3.1E-07 54.3 5.6 113 273-393 25-144 (227)
367 1ej0_A FTSJ; methyltransferase 95.9 0.016 5.3E-07 50.0 6.8 134 290-435 24-178 (180)
368 3lpm_A Putative methyltransfer 95.8 0.012 4E-07 55.5 6.4 122 289-412 50-197 (259)
369 2pxx_A Uncharacterized protein 95.8 0.0055 1.9E-07 55.1 3.9 121 290-414 44-183 (215)
370 3opn_A Putative hemolysin; str 95.8 0.034 1.2E-06 51.8 9.3 134 290-435 39-202 (232)
371 3jwh_A HEN1; methyltransferase 95.8 0.0089 3E-07 54.4 5.2 120 267-394 12-144 (217)
372 2vz8_A Fatty acid synthase; tr 95.8 0.0028 9.6E-08 77.9 2.2 96 47-146 1243-1348(2512)
373 3g5t_A Trans-aconitate 3-methy 95.7 0.0068 2.3E-07 58.3 4.2 95 288-389 36-147 (299)
374 3njr_A Precorrin-6Y methylase; 95.6 0.013 4.5E-07 53.3 5.5 139 256-411 26-175 (204)
375 3r0q_C Probable protein argini 95.5 0.014 4.7E-07 58.5 5.9 115 272-390 47-168 (376)
376 2kw5_A SLR1183 protein; struct 95.5 0.012 4E-07 52.8 4.9 112 291-411 32-166 (202)
377 1ri5_A MRNA capping enzyme; me 95.5 0.0081 2.8E-07 57.1 3.9 101 290-392 66-175 (298)
378 4fsd_A Arsenic methyltransfera 95.5 0.0062 2.1E-07 61.1 3.2 115 290-410 85-245 (383)
379 1g6q_1 HnRNP arginine N-methyl 95.5 0.011 3.9E-07 58.0 5.0 95 290-388 40-142 (328)
380 3dtn_A Putative methyltransfer 95.4 0.0096 3.3E-07 54.7 4.0 98 289-391 45-148 (234)
381 3vc1_A Geranyl diphosphate 2-C 95.4 0.0092 3.2E-07 57.8 3.9 98 287-391 116-221 (312)
382 2p35_A Trans-aconitate 2-methy 95.4 0.021 7.4E-07 53.0 6.2 98 287-391 32-132 (259)
383 2y1w_A Histone-arginine methyl 95.3 0.021 7.3E-07 56.4 6.4 111 275-390 37-154 (348)
384 3g89_A Ribosomal RNA small sub 95.3 0.033 1.1E-06 52.4 7.4 140 288-439 80-233 (249)
385 3q7e_A Protein arginine N-meth 95.3 0.014 4.8E-07 57.8 5.0 96 290-389 68-171 (349)
386 3g2m_A PCZA361.24; SAM-depende 95.3 0.024 8.2E-07 54.3 6.5 94 291-390 85-189 (299)
387 2b3t_A Protein methyltransfera 95.3 0.036 1.2E-06 52.6 7.7 135 290-434 111-275 (276)
388 3bgv_A MRNA CAP guanine-N7 met 95.3 0.016 5.6E-07 56.0 5.3 122 267-392 14-156 (313)
389 2frn_A Hypothetical protein PH 95.3 0.013 4.5E-07 56.0 4.4 112 290-412 127-253 (278)
390 2p8j_A S-adenosylmethionine-de 95.2 0.0091 3.1E-07 53.7 2.9 97 290-391 25-128 (209)
391 3dp7_A SAM-dependent methyltra 95.0 0.01 3.5E-07 59.0 3.0 101 287-391 178-287 (363)
392 2zig_A TTHA0409, putative modi 95.0 0.048 1.6E-06 52.7 7.7 37 47-83 238-276 (297)
393 3m70_A Tellurite resistance pr 94.9 0.014 4.9E-07 55.4 3.7 115 289-411 121-255 (286)
394 2plw_A Ribosomal RNA methyltra 94.9 0.031 1.1E-06 49.9 5.7 83 349-434 105-195 (201)
395 3i53_A O-methyltransferase; CO 94.9 0.027 9.2E-07 54.9 5.7 122 283-411 164-316 (332)
396 3m33_A Uncharacterized protein 94.9 0.011 3.9E-07 54.3 2.7 108 290-410 50-161 (226)
397 3r24_A NSP16, 2'-O-methyl tran 94.9 0.078 2.7E-06 51.2 8.3 110 21-147 90-218 (344)
398 2aot_A HMT, histamine N-methyl 94.8 0.017 5.8E-07 55.4 3.8 98 289-390 53-171 (292)
399 1wg8_A Predicted S-adenosylmet 94.8 0.018 6.3E-07 55.4 4.0 31 47-77 25-57 (285)
400 2nxc_A L11 mtase, ribosomal pr 94.8 0.033 1.1E-06 52.4 5.8 110 290-411 122-239 (254)
401 1wzn_A SAM-dependent methyltra 94.7 0.031 1.1E-06 51.8 5.3 98 287-390 40-144 (252)
402 3u81_A Catechol O-methyltransf 94.7 0.005 1.7E-07 56.5 -0.4 134 289-435 59-213 (221)
403 1qzz_A RDMB, aclacinomycin-10- 94.6 0.029 9.9E-07 55.5 5.1 143 285-436 179-357 (374)
404 2ip2_A Probable phenazine-spec 94.6 0.033 1.1E-06 54.2 5.4 99 285-391 165-272 (334)
405 3orh_A Guanidinoacetate N-meth 94.6 0.015 5.2E-07 54.1 2.8 97 290-390 62-169 (236)
406 3vyw_A MNMC2; tRNA wobble urid 94.6 0.18 6.1E-06 49.1 10.4 73 93-179 169-247 (308)
407 2fyt_A Protein arginine N-meth 94.6 0.034 1.2E-06 54.8 5.5 111 274-388 50-168 (340)
408 3q87_B N6 adenine specific DNA 94.5 0.13 4.5E-06 45.0 8.5 129 291-434 26-161 (170)
409 3tr6_A O-methyltransferase; ce 94.5 0.017 5.8E-07 52.7 2.7 127 290-435 66-224 (225)
410 2zig_A TTHA0409, putative modi 94.4 0.056 1.9E-06 52.2 6.5 94 91-188 21-140 (297)
411 3r3h_A O-methyltransferase, SA 94.4 0.039 1.3E-06 51.6 5.2 128 289-435 61-220 (242)
412 1yzh_A TRNA (guanine-N(7)-)-me 94.2 0.043 1.5E-06 49.8 4.9 120 290-411 43-177 (214)
413 3lst_A CALO1 methyltransferase 94.1 0.05 1.7E-06 53.6 5.3 121 283-411 179-331 (348)
414 3gwz_A MMCR; methyltransferase 94.0 0.06 2.1E-06 53.5 5.8 140 283-435 197-369 (369)
415 3mcz_A O-methyltransferase; ad 93.8 0.022 7.7E-07 55.9 2.2 139 284-435 174-349 (352)
416 1zx0_A Guanidinoacetate N-meth 93.8 0.019 6.5E-07 53.0 1.6 100 290-393 62-172 (236)
417 3tfw_A Putative O-methyltransf 93.6 0.098 3.3E-06 48.8 6.3 132 289-435 64-225 (248)
418 3sso_A Methyltransferase; macr 93.5 0.03 1E-06 56.7 2.7 113 289-410 217-361 (419)
419 3duw_A OMT, O-methyltransferas 93.4 0.053 1.8E-06 49.3 3.9 93 290-391 60-167 (223)
420 2fca_A TRNA (guanine-N(7)-)-me 93.0 0.096 3.3E-06 47.7 5.0 116 290-410 40-173 (213)
421 1vbf_A 231AA long hypothetical 92.9 0.044 1.5E-06 50.1 2.6 90 289-392 71-166 (231)
422 2a14_A Indolethylamine N-methy 92.9 0.038 1.3E-06 52.1 2.1 62 349-410 155-232 (263)
423 3c3p_A Methyltransferase; NP_9 92.8 0.079 2.7E-06 47.8 4.2 92 290-391 58-160 (210)
424 3bkx_A SAM-dependent methyltra 92.6 0.22 7.5E-06 46.5 7.0 99 289-391 44-159 (275)
425 2r3s_A Uncharacterized protein 92.5 0.069 2.4E-06 51.8 3.5 99 287-391 164-271 (335)
426 2esr_A Methyltransferase; stru 92.5 0.013 4.6E-07 51.2 -1.5 98 290-394 33-141 (177)
427 3dou_A Ribosomal RNA large sub 92.5 0.4 1.4E-05 42.9 8.3 136 289-435 26-181 (191)
428 3b3j_A Histone-arginine methyl 92.5 0.065 2.2E-06 55.5 3.4 96 288-389 158-261 (480)
429 3lbf_A Protein-L-isoaspartate 92.4 0.049 1.7E-06 49.0 2.2 91 288-392 77-175 (210)
430 2p41_A Type II methyltransfera 92.4 0.026 8.8E-07 55.0 0.2 95 290-390 84-190 (305)
431 3ckk_A TRNA (guanine-N(7)-)-me 92.4 0.17 5.8E-06 47.0 5.9 118 289-410 47-189 (235)
432 2oxt_A Nucleoside-2'-O-methylt 92.3 0.13 4.5E-06 48.9 5.1 137 290-434 76-227 (265)
433 4gek_A TRNA (CMO5U34)-methyltr 92.2 0.042 1.4E-06 52.2 1.4 95 291-391 73-178 (261)
434 3ggd_A SAM-dependent methyltra 92.1 0.04 1.4E-06 50.9 1.2 96 290-391 58-163 (245)
435 3iv6_A Putative Zn-dependent a 92.0 0.046 1.6E-06 52.0 1.5 96 289-390 46-147 (261)
436 1tw3_A COMT, carminomycin 4-O- 92.0 0.086 2.9E-06 51.8 3.5 142 285-435 180-356 (360)
437 1pjz_A Thiopurine S-methyltran 91.9 0.013 4.5E-07 53.1 -2.4 116 290-411 24-171 (203)
438 3g07_A 7SK snRNA methylphospha 91.9 0.029 9.9E-07 53.9 -0.1 45 347-391 174-220 (292)
439 3cbg_A O-methyltransferase; cy 91.8 0.075 2.6E-06 49.0 2.7 128 290-435 74-232 (232)
440 3dr5_A Putative O-methyltransf 91.7 0.28 9.4E-06 45.0 6.4 129 291-436 59-214 (221)
441 2bm8_A Cephalosporin hydroxyla 91.6 0.23 7.8E-06 46.1 5.8 110 290-410 83-213 (236)
442 2gb4_A Thiopurine S-methyltran 91.5 0.09 3.1E-06 49.5 2.9 116 290-411 70-222 (252)
443 3fpf_A Mtnas, putative unchara 91.5 0.057 1.9E-06 52.4 1.5 129 290-435 124-264 (298)
444 2gpy_A O-methyltransferase; st 91.3 0.044 1.5E-06 50.4 0.5 93 290-391 56-160 (233)
445 1boo_A Protein (N-4 cytosine-s 91.3 0.3 1E-05 47.6 6.6 93 92-188 15-124 (323)
446 2hnk_A SAM-dependent O-methylt 91.2 0.14 4.7E-06 47.3 3.7 128 290-436 62-232 (239)
447 3g7u_A Cytosine-specific methy 91.2 1.6 5.4E-05 43.5 11.8 123 47-174 4-145 (376)
448 2avd_A Catechol-O-methyltransf 91.0 0.12 4.1E-06 47.0 3.2 128 289-435 70-229 (229)
449 3p9n_A Possible methyltransfer 90.9 0.047 1.6E-06 48.4 0.2 99 290-393 46-155 (189)
450 2ozv_A Hypothetical protein AT 90.8 0.5 1.7E-05 44.3 7.4 120 288-410 36-188 (260)
451 1fp1_D Isoliquiritigenin 2'-O- 90.7 0.13 4.6E-06 50.9 3.4 97 287-391 208-306 (372)
452 2ipx_A RRNA 2'-O-methyltransfe 90.7 0.22 7.6E-06 45.6 4.7 113 290-411 79-212 (233)
453 1mjf_A Spermidine synthase; sp 90.6 0.29 1E-05 46.6 5.6 140 289-435 76-239 (281)
454 1g55_A DNA cytosine methyltran 90.5 1.1 3.9E-05 43.9 9.9 126 47-177 4-146 (343)
455 1x19_A CRTF-related protein; m 90.4 0.18 6.2E-06 49.6 4.0 101 284-391 186-295 (359)
456 3p2e_A 16S rRNA methylase; met 90.1 0.2 6.8E-06 46.2 3.8 98 290-389 26-137 (225)
457 2nyu_A Putative ribosomal RNA 90.1 0.16 5.6E-06 44.8 3.1 43 349-391 96-145 (196)
458 2vdw_A Vaccinia virus capping 89.9 0.14 4.7E-06 49.6 2.5 101 289-392 49-170 (302)
459 3bwc_A Spermidine synthase; SA 89.8 0.25 8.5E-06 47.7 4.4 143 288-435 95-258 (304)
460 1p91_A Ribosomal RNA large sub 89.8 0.23 7.9E-06 46.4 4.0 90 289-391 86-178 (269)
461 1ws6_A Methyltransferase; stru 89.7 0.043 1.5E-06 47.2 -1.0 95 290-393 43-149 (171)
462 3htx_A HEN1; HEN1, small RNA m 89.7 1.4 4.9E-05 48.5 10.5 99 289-390 722-833 (950)
463 2vdv_E TRNA (guanine-N(7)-)-me 89.6 0.25 8.5E-06 45.8 4.1 114 290-407 51-190 (246)
464 3mq2_A 16S rRNA methyltransfer 89.5 0.33 1.1E-05 43.7 4.8 117 290-411 29-179 (218)
465 3adn_A Spermidine synthase; am 89.4 0.97 3.3E-05 43.5 8.2 145 287-436 82-246 (294)
466 2ift_A Putative methylase HI07 89.4 0.13 4.5E-06 46.2 1.9 99 290-395 55-167 (201)
467 3gdh_A Trimethylguanosine synt 89.3 0.022 7.6E-07 52.6 -3.4 93 290-391 80-181 (241)
468 1nt2_A Fibrillarin-like PRE-rR 89.2 0.11 3.9E-06 47.2 1.4 93 290-390 59-160 (210)
469 2yvl_A TRMI protein, hypotheti 89.0 0.47 1.6E-05 43.4 5.5 104 290-406 93-206 (248)
470 3a27_A TYW2, uncharacterized p 88.9 0.32 1.1E-05 46.1 4.3 111 290-411 121-246 (272)
471 1i1n_A Protein-L-isoaspartate 88.8 0.14 4.8E-06 46.5 1.7 89 290-391 79-182 (226)
472 3c3y_A Pfomt, O-methyltransfer 88.7 0.27 9.3E-06 45.5 3.6 94 289-391 71-181 (237)
473 3mb5_A SAM-dependent methyltra 88.5 0.27 9.2E-06 45.5 3.5 106 289-407 94-211 (255)
474 1inl_A Spermidine synthase; be 88.5 0.68 2.3E-05 44.5 6.4 143 289-436 91-253 (296)
475 2pwy_A TRNA (adenine-N(1)-)-me 88.4 0.93 3.2E-05 41.6 7.1 107 290-409 98-217 (258)
476 2uyo_A Hypothetical protein ML 88.2 3.2 0.00011 40.2 11.0 103 45-148 103-220 (310)
477 3id6_C Fibrillarin-like rRNA/T 88.1 0.37 1.3E-05 44.9 4.1 91 290-390 78-180 (232)
478 1iy9_A Spermidine synthase; ro 88.1 0.97 3.3E-05 42.8 7.2 145 287-436 74-237 (275)
479 1nv8_A HEMK protein; class I a 88.0 0.36 1.2E-05 46.1 4.1 130 290-435 125-282 (284)
480 2igt_A SAM dependent methyltra 87.9 0.29 9.8E-06 48.0 3.4 119 290-411 155-299 (332)
481 2fhp_A Methylase, putative; al 87.8 0.078 2.7E-06 46.4 -0.7 97 290-393 46-156 (187)
482 3pvc_A TRNA 5-methylaminomethy 87.7 1.3 4.5E-05 47.6 8.7 61 106-178 169-231 (689)
483 3dxy_A TRNA (guanine-N(7)-)-me 87.6 0.26 8.8E-06 45.2 2.6 114 289-405 35-165 (218)
484 1ixk_A Methyltransferase; open 87.5 0.35 1.2E-05 46.9 3.7 119 290-410 120-269 (315)
485 2yxe_A Protein-L-isoaspartate 87.4 0.24 8.2E-06 44.5 2.3 92 289-393 78-179 (215)
486 2pjd_A Ribosomal RNA small sub 87.3 0.17 5.9E-06 49.6 1.3 99 290-391 198-303 (343)
487 2dph_A Formaldehyde dismutase; 87.3 0.58 2E-05 46.7 5.3 96 38-146 182-299 (398)
488 1fp2_A Isoflavone O-methyltran 87.2 0.16 5.4E-06 49.9 1.0 97 287-391 187-288 (352)
489 1f8f_A Benzyl alcohol dehydrog 87.1 0.41 1.4E-05 47.2 4.0 94 38-146 187-289 (371)
490 3reo_A (ISO)eugenol O-methyltr 86.9 0.73 2.5E-05 45.5 5.7 98 286-391 201-300 (368)
491 1yb2_A Hypothetical protein TA 86.7 1.5 5.1E-05 41.2 7.6 110 288-410 110-231 (275)
492 2km1_A Protein DRE2; yeast, an 86.7 0.89 3E-05 38.7 5.2 71 103-189 54-125 (136)
493 3p9c_A Caffeic acid O-methyltr 86.6 0.78 2.7E-05 45.3 5.7 98 286-391 199-298 (364)
494 1sui_A Caffeoyl-COA O-methyltr 86.5 0.43 1.5E-05 44.5 3.5 94 289-391 80-190 (247)
495 1pl8_A Human sorbitol dehydrog 86.2 0.84 2.9E-05 44.7 5.6 94 38-146 168-273 (356)
496 1g60_A Adenine-specific methyl 86.1 1.4 4.8E-05 41.3 7.0 69 104-187 19-102 (260)
497 1g8a_A Fibrillarin-like PRE-rR 86.0 0.17 5.9E-06 46.0 0.5 91 290-389 75-176 (227)
498 1kol_A Formaldehyde dehydrogen 85.7 1.4 4.6E-05 43.9 7.0 99 38-146 182-300 (398)
499 2pbf_A Protein-L-isoaspartate 85.7 0.2 6.9E-06 45.5 0.8 90 290-391 82-193 (227)
500 3ps9_A TRNA 5-methylaminomethy 85.7 2.8 9.6E-05 44.8 9.9 59 106-178 177-239 (676)
No 1
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.71 E-value=1.5e-18 Score=169.10 Aligned_cols=213 Identities=10% Similarity=0.056 Sum_probs=135.8
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .++|+|+++.++..+.. .+...+.++.+.+.|...++++ ++||+|+|+. +++
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~-~l~ 100 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARE-LFRLLPYDSEFLEGDATEIELN-DKYDIAICHA-FLL 100 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHH-HHHSSSSEEEEEESCTTTCCCS-SCEEEEEEES-CGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHhcCCceEEEEcchhhcCcC-CCeeEEEECC-hhh
Confidence 48999999999999999874 57788777765544432 2223345788999999988885 6999999998 588
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCC-----CC-CChhhHH---HHHHHHHHHHhcCeEEEeeecceeEeeccCchh
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEA-----YA-HDPENRR---IWNAMYDLLKSMCWKIVSKKDQTVIWAKPISNS 191 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~-----~~-~~~~~~~---~~~~l~~l~~~~gf~~v~~~~~~~~w~k~l~~~ 191 (444)
+.++...+++++.++|||||++++.++.+ .. ..+.... ....+..+... .
T Consensus 101 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 159 (284)
T 3gu3_A 101 HMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFES---------------------D 159 (284)
T ss_dssp GCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHH---------------------H
T ss_pred cCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHH---------------------H
Confidence 88999999999999999999999988772 10 0000000 01111111111 0
Q ss_pred hHhhcCCCCCCCcccCCCCcchhhhhcccc----cccccccccccccCccccCCC--C-----CCCCCCCCccc---cCC
Q 013393 192 CYLKRVPGSRPPLCSSDDDPDVTWNVLMKA----CISPYSAKMHHEKGTGLVPWP--A-----RLTAPPPRLEE---VGV 257 (444)
Q Consensus 192 c~~~~~~~~~p~lc~~~~~~~~awy~~l~~----ci~~~p~~~~~~~~~~~~~wP--~-----rL~~~p~~~~~---~g~ 257 (444)
............ ........++|..++. ...++| ...|| + +|+..+-+... +++
T Consensus 160 ~~~~~~~~~~~~--~l~~~l~~aGF~~v~~~~~~~~~~~~----------~~~~~~d~~~l~~~l~~~G~~~~~~~~~~~ 227 (284)
T 3gu3_A 160 TQRNGKDGNIGM--KIPIYLSELGVKNIECRVSDKVNFLD----------SNMHHNDKNDLYQSLKEEGIAGDPGDKQQF 227 (284)
T ss_dssp HHHTCCCTTGGG--THHHHHHHTTCEEEEEEECCCCEEEC----------TTCCSHHHHHHHHHHHHTTTTCCCCCHHHH
T ss_pred hhhhcccccHHH--HHHHHHHHcCCCeEEEEEcCCccccC----------CCCChHHHHHHHHHHHhccccCCcccHHHH
Confidence 000000000000 0012344566766665 344445 56777 3 45554443322 344
Q ss_pred ChhHHHhhHhhHHHHHHHHHHHhhhhccCCceeEEEecc
Q 013393 258 TTEEFHEDIGIWQVRVVDYWKQMKTVAQKNTFRNVMDMN 296 (444)
Q Consensus 258 ~~~~f~~~~~~w~~~v~~y~~~l~~~l~~~~~rnvmDm~ 296 (444)
+...+++ +|..+++..|++.+++.+++.++|-+..+-
T Consensus 228 ~~~l~~~--g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 264 (284)
T 3gu3_A 228 VERLIAR--GLTYDNALAQYEAELRFFKALHLHSSLVYA 264 (284)
T ss_dssp HHHHHTT--TCCHHHHHHHHHHHHHHHHHCCTTCCEEEC
T ss_pred HHHHHHc--cccHHHHHHHHHHHHHHHHHhccchhhhhc
Confidence 4455554 789999999999999999999999887764
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.65 E-value=8.6e-16 Score=146.96 Aligned_cols=131 Identities=14% Similarity=0.212 Sum_probs=96.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
.+|||||||+|.++..+++. .++++|+++.++..+... +.+.+ .++.+...|...+|+++++||+|+|+. +++|.
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~-~l~~~ 116 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAF-IEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI-AAHHF 116 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCC-CCCSCTTCEEEEEEES-CGGGC
T ss_pred CEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCceEEEEecHHhCCCCCCCEEEEEEhh-hhHhc
Confidence 48999999999999999875 577777777665444432 22233 468899999999999999999999998 58888
Q ss_pred ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhH-----------------HHHHHHHHHHHhcCeEEEeeec
Q 013393 123 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR-----------------RIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 123 ~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~-----------------~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
++...+|+++.++|||||+++++++..... +... ....++.+++++.||+++....
T Consensus 117 ~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 117 PNPASFVSEAYRVLKKGGQLLLVDNSAPEN-DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEEBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEEcCCCCC-HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 999999999999999999999975432111 1100 0123677888889998766544
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.63 E-value=3e-15 Score=143.88 Aligned_cols=154 Identities=21% Similarity=0.348 Sum_probs=107.8
Q ss_pred cccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--
Q 013393 16 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI-- 90 (444)
Q Consensus 16 ~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~-- 90 (444)
.+........+.+.+.+++ .++ .+|||||||+|.++..+++. .++++|+++.++..+... +...+.
T Consensus 41 ~~~~~~~~~~~~l~~~~~~-----~~~---~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~ 111 (273)
T 3bus_A 41 SVDDATDRLTDEMIALLDV-----RSG---DRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANAR-ATAAGLAN 111 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCC-----CTT---CEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHH-HHHTTCTT
T ss_pred CHHHHHHHHHHHHHHhcCC-----CCC---CEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH-HHhcCCCc
Confidence 3444445555555555542 233 38999999999999999863 577777776555444322 222233
Q ss_pred CcEEEEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCC-hhhH---H--------
Q 013393 91 PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PENR---R-------- 158 (444)
Q Consensus 91 ~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~-~~~~---~-------- 158 (444)
++.+...|...+|+++++||+|+|.. +++|.++...+++++.++|||||+++++++...... .... .
T Consensus 112 ~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (273)
T 3bus_A 112 RVTFSYADAMDLPFEDASFDAVWALE-SLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGV 190 (273)
T ss_dssp TEEEEECCTTSCCSCTTCEEEEEEES-CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTC
T ss_pred ceEEEECccccCCCCCCCccEEEEec-hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCc
Confidence 58888999999999889999999998 588888999999999999999999999875432111 1110 0
Q ss_pred ----HHHHHHHHHHhcCeEEEeeec
Q 013393 159 ----IWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 159 ----~~~~l~~l~~~~gf~~v~~~~ 179 (444)
.-.++.+++++.||+++....
T Consensus 191 ~~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 191 LSLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCHHHHHHHHHHcCCeEEEEEE
Confidence 014678889999998876554
No 4
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.62 E-value=1.8e-15 Score=142.37 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=97.2
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
+|||||||+|.++..+++. .++|+|++ +.+++.|+++.. ++.+...|...+ +++++||+|+|.. +++|.+
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s-----~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~-~l~~~~ 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFNDITCVEAS-----EEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTH-VLEHID 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCSCEEEEESC-----HHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEES-CGGGCS
T ss_pred cEEEECCCCCHHHHHHHHhCCcEEEEeCC-----HHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhh-HHHhhc
Confidence 7999999999999999875 56666555 555566666644 788888888877 4678999999998 588889
Q ss_pred cHHHHHHHHH-hhcCCCeEEEEEcCCCCCCC-----------------hhh-------HHHHHHHHHHHHhcCeEEEeee
Q 013393 124 RDGILLLELD-RLLRPGGYFVYSSPEAYAHD-----------------PEN-------RRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 124 d~~~~L~ei~-rvLkPGG~lvis~p~~~~~~-----------------~~~-------~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+...+|+++. ++|||||+++++.+...... ... ...-.++.+++++.||+++...
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9999999999 99999999999886642110 000 0023478899999999988775
Q ss_pred c
Q 013393 179 D 179 (444)
Q Consensus 179 ~ 179 (444)
.
T Consensus 198 ~ 198 (250)
T 2p7i_A 198 G 198 (250)
T ss_dssp E
T ss_pred e
Confidence 3
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=3.6e-15 Score=145.38 Aligned_cols=158 Identities=16% Similarity=0.147 Sum_probs=109.3
Q ss_pred cccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--C
Q 013393 16 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--I 90 (444)
Q Consensus 16 ~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~ 90 (444)
.+........+.+.+.++.. ..+.++ .+|||||||+|.++..+++. .++|+|+++.++..+.... ...+ .
T Consensus 58 ~~~~~~~~~~~~l~~~l~~~-~~~~~~---~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~ 132 (297)
T 2o57_A 58 EIREASLRTDEWLASELAMT-GVLQRQ---AKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYN-NQAGLAD 132 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TCCCTT---CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHHTCTT
T ss_pred chHHHHHHHHHHHHHHhhhc-cCCCCC---CEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH-HhcCCCc
Confidence 34444455555666655100 012233 38999999999999999874 5777777766554444322 2223 3
Q ss_pred CcEEEEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCCh-h-hHH----------
Q 013393 91 PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP-E-NRR---------- 158 (444)
Q Consensus 91 ~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~-~-~~~---------- 158 (444)
++.+...|...+|+++++||+|+|.. +++|.++...+|+++.++|||||+++++++....... . ...
T Consensus 133 ~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (297)
T 2o57_A 133 NITVKYGSFLEIPCEDNSYDFIWSQD-AFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDM 211 (297)
T ss_dssp TEEEEECCTTSCSSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSC
T ss_pred ceEEEEcCcccCCCCCCCEeEEEecc-hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCC
Confidence 58899999999999999999999998 4777789999999999999999999998754221111 1 111
Q ss_pred -HHHHHHHHHHhcCeEEEeeec
Q 013393 159 -IWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 159 -~~~~l~~l~~~~gf~~v~~~~ 179 (444)
.-..+.+++++.||+++....
T Consensus 212 ~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 212 GSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEEE
Confidence 123677889999998876643
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=1e-14 Score=140.17 Aligned_cols=130 Identities=18% Similarity=0.236 Sum_probs=99.9
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .++|+|+++.++..+... +...+ .++.+...|...+|+++++||+|+|+. +++
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~-~~~ 125 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRN-ARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG-AIY 125 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS-CGG
T ss_pred CEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHH-HHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC-Cce
Confidence 48999999999999999885 678888877665544432 23334 348899999999998889999999998 477
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCC--CChhhHHHH----------HHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~--~~~~~~~~~----------~~l~~l~~~~gf~~v~~~ 178 (444)
+. +...+++++.++|||||+++++++.... ........| .++.++++++||+++...
T Consensus 126 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 126 NI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred ec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 76 8899999999999999999998764322 122222333 378889999999988654
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.61 E-value=4e-15 Score=138.30 Aligned_cols=135 Identities=16% Similarity=0.202 Sum_probs=101.6
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEecccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 124 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d 124 (444)
.+|||+|||+|.++..+++.. ..+.+.|+++.+++.++++.. ++.+...|...++++ ++||+|+|+. ++++.++
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l~~~~~ 121 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY-AFHHLTD 121 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES-CGGGSCH
T ss_pred CeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc-chhcCCh
Confidence 389999999999999998862 234444555666677777654 788889999999888 8999999998 5888888
Q ss_pred HHH--HHHHHHhhcCCCeEEEEEcCCCCCCChh-----------------hHH-----HHHHHHHHHHhcCeEEEeeecc
Q 013393 125 DGI--LLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------NRR-----IWNAMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 125 ~~~--~L~ei~rvLkPGG~lvis~p~~~~~~~~-----------------~~~-----~~~~l~~l~~~~gf~~v~~~~~ 180 (444)
... +++++.++|||||+++++++........ ... .-.++.++++++||+++.....
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 876 9999999999999999987553211100 000 1257889999999998877765
Q ss_pred eeEee
Q 013393 181 TVIWA 185 (444)
Q Consensus 181 ~~~w~ 185 (444)
...|.
T Consensus 202 ~~~w~ 206 (220)
T 3hnr_A 202 HFVWV 206 (220)
T ss_dssp SSEEE
T ss_pred ceEEE
Confidence 55554
No 8
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=5.1e-16 Score=149.14 Aligned_cols=111 Identities=16% Similarity=0.166 Sum_probs=87.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecC
Q 013393 22 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT 99 (444)
Q Consensus 22 ~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~ 99 (444)
..+.+.+.+.++. ....+|||||||+|.++..+++. .|+|+|++ +.+++.++++. ++.+.+.|.
T Consensus 20 ~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s-----~~~~~~a~~~~-~~~~~~~d~ 85 (261)
T 3ege_A 20 IRIVNAIINLLNL--------PKGSVIADIGAGTGGYSVALANQGLFVYAVEPS-----IVMRQQAVVHP-QVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSC-----HHHHHSSCCCT-TEEEECCCT
T ss_pred HHHHHHHHHHhCC--------CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCC-----HHHHHHHHhcc-CCEEEECch
Confidence 3455666666643 22348999999999999999874 45555554 55556555544 888999999
Q ss_pred ccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 100 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 100 ~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
..+|+++++||+|+|+. +++|.++...+++++.++|| ||++++.++.
T Consensus 86 ~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 86 ENLALPDKSVDGVISIL-AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TSCCSCTTCBSEEEEES-CGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred hhCCCCCCCEeEEEEcc-hHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 99999999999999998 47778999999999999999 9988887654
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=9.2e-15 Score=139.10 Aligned_cols=128 Identities=16% Similarity=0.276 Sum_probs=98.1
Q ss_pred eEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
+|||+|||+|.++..+++. .++|+|+++..+..+..+ +...+. ++.+...|...+|+++++||+|+|+. ++++
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 126 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNEN-AVKANCADRVKGITGSMDNLPFQNEELDLIWSEG-AIYN 126 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES-CSCC
T ss_pred eEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChhhCCCCCCCEEEEEecC-hHhh
Confidence 8999999999999999874 678888877666544432 333343 37889999999999889999999998 4777
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCC--ChhhHHHH----------HHHHHHHHhcCeEEEee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAH--DPENRRIW----------NAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~--~~~~~~~~----------~~l~~l~~~~gf~~v~~ 177 (444)
. +...+++++.++|||||+++++++..... .......| .++.++++++||+++..
T Consensus 127 ~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 127 I-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp C-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred c-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 6 78999999999999999999987543221 12222233 46788999999988764
No 10
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.60 E-value=1.6e-14 Score=136.67 Aligned_cols=132 Identities=15% Similarity=0.182 Sum_probs=98.4
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||||||+|.++..+++. .++++|+++.++..+..........++.+...|...+|+++++||+|+|+. .++|.+
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~ 101 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY-AAHHFS 101 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES-CGGGCS
T ss_pred CEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC-chhhcc
Confidence 38999999999999999875 578888877666544433322222468888999999999889999999998 477778
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhH-----------------HHHHHHHHHHHhcCeEEEeeec
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR-----------------RIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~-----------------~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+...++.++.++|||||++++.++..... +... ....++.+++++.||+.+....
T Consensus 102 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 102 DVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 99999999999999999999976442111 1100 0124677888889998765543
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.60 E-value=5.3e-15 Score=141.00 Aligned_cols=128 Identities=22% Similarity=0.278 Sum_probs=98.5
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. .|+|+|+ ++.+++.++++. .++.+...|...+|+++++||+|+|+. ++
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 130 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGAHTHGIDI-----CSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD-AI 130 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEES-----CHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES-CG
T ss_pred CEEEEECCCCCHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH-HH
Confidence 48999999999999999874 4555555 556667777664 578889999999999899999999988 58
Q ss_pred ccc--ccHHHHHHHHHhhcCCCeEEEEEcCCCCC---CChhhHH----------HHHHHHHHHHhcCeEEEeeec
Q 013393 120 DWL--QRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRR----------IWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 120 ~~~--~d~~~~L~ei~rvLkPGG~lvis~p~~~~---~~~~~~~----------~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+|. ++...+++++.++|||||+++++++.... ....... .-.++.+++++.||+.+....
T Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 131 LALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 887 78889999999999999999998753221 1111100 124788899999998877654
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=5e-15 Score=143.06 Aligned_cols=104 Identities=18% Similarity=0.278 Sum_probs=78.0
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC------CceEEEcCcccchHHHHHHHHHc-CCCcEEEEecCccCCCCCCCccE
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFEL 111 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~------~V~gvdis~~dis~a~i~~a~e~-~~~~~~~~~d~~~lp~~~~sFDl 111 (444)
++++. +|||||||+|.++..|+++ .|+|+|+++.++..++.+..... ..++.+...|+..+|++ .||+
T Consensus 68 ~~~~~---~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~ 142 (261)
T 4gek_A 68 VQPGT---QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASM 142 (261)
T ss_dssp CCTTC---EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEE
T ss_pred CCCCC---EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cccc
Confidence 45555 8999999999999999874 46777766655544443222211 34678889999888874 6999
Q ss_pred EEeccccccccccH--HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 112 AHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 112 I~~~~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
|+|+. ++||+++. ..+|++++|+|||||+|+++++.
T Consensus 143 v~~~~-~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 143 VVLNF-TLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp EEEES-CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ceeee-eeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 99988 58886544 47899999999999999998654
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=5.7e-15 Score=140.45 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=104.6
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEE
Q 013393 20 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTL 94 (444)
Q Consensus 20 g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~ 94 (444)
......+.+.+.+.+ .++ .+|||||||+|.++..+++. .++++|+++.++..+.. .+...+. ++.+
T Consensus 20 ~~~~~~~~l~~~~~~-----~~~---~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~ 90 (256)
T 1nkv_A 20 FTEEKYATLGRVLRM-----KPG---TRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHF 90 (256)
T ss_dssp CCHHHHHHHHHHTCC-----CTT---CEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEE
T ss_pred CCHHHHHHHHHhcCC-----CCC---CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEE
Confidence 345566666666643 333 38999999999999998863 67888887766655443 2333343 5889
Q ss_pred EEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCC--hhhH-----------HHHH
Q 013393 95 GVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENR-----------RIWN 161 (444)
Q Consensus 95 ~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~--~~~~-----------~~~~ 161 (444)
...|...+++ +++||+|+|.. ++++.++...+|+++.++|||||+++++++...... .... ....
T Consensus 91 ~~~d~~~~~~-~~~fD~V~~~~-~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (256)
T 1nkv_A 91 IHNDAAGYVA-NEKCDVAACVG-ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLP 168 (256)
T ss_dssp EESCCTTCCC-SSCEEEEEEES-CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHH
T ss_pred EECChHhCCc-CCCCCEEEECC-ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHH
Confidence 9999988887 78999999988 477778899999999999999999999875432111 1101 1124
Q ss_pred HHHHHHHhcCeEEEe
Q 013393 162 AMYDLLKSMCWKIVS 176 (444)
Q Consensus 162 ~l~~l~~~~gf~~v~ 176 (444)
++.+++++.||+.+.
T Consensus 169 ~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 169 GLVGAFDDLGYDVVE 183 (256)
T ss_dssp HHHHHHHTTTBCCCE
T ss_pred HHHHHHHHCCCeeEE
Confidence 677888888887654
No 14
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.59 E-value=4.8e-16 Score=147.07 Aligned_cols=124 Identities=19% Similarity=0.246 Sum_probs=93.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC--CCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l--p~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||||||+|.++..+++. .++|+| +++.+++.++++ +.+...|...+ ++++++||+|+|+. +++|
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD-----~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~-~l~~ 113 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIESIGVD-----INEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISH-FVEH 113 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCEEEEC-----SCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEES-CGGG
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcEEEEE-----CCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECC-chhh
Confidence 38999999999999999874 455555 455666777665 67777787664 78889999999998 5888
Q ss_pred cc--cHHHHHHHHHhhcCCCeEEEEEcCCCCCCCh--------hh--HHHHHHHHHHHHhcCeEEEeee
Q 013393 122 LQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHDP--------EN--RRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 122 ~~--d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~--------~~--~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.+ +...+++++.++|||||+++++.+....... .. ...-.++.+++++.||+++...
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 77 4489999999999999999998876432100 00 0012578899999999877554
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=2.2e-15 Score=138.41 Aligned_cols=127 Identities=16% Similarity=0.129 Sum_probs=100.2
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc-
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ- 123 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~- 123 (444)
+|||+|||+|.++..+++. .++|+| +++.+++.++++..++.+...|...+++++++||+|+|+. +++|.+
T Consensus 44 ~vLDiGcG~G~~~~~l~~~~~~v~gvD-----~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 117 (203)
T 3h2b_A 44 VILDVGSGTGRWTGHLASLGHQIEGLE-----PATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY-SLIHMGP 117 (203)
T ss_dssp CEEEETCTTCHHHHHHHHTTCCEEEEC-----CCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES-SSTTCCT
T ss_pred eEEEecCCCCHHHHHHHhcCCeEEEEe-----CCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh-hHhcCCH
Confidence 7999999999999999886 455554 4566777787777789999999999998889999999998 477765
Q ss_pred -cHHHHHHHHHhhcCCCeEEEEEcCCCCCCCh-------hhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 124 -RDGILLLELDRLLRPGGYFVYSSPEAYAHDP-------ENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 124 -d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~-------~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+...+++++.++|||||+++++.+....... .......++.+++++.||+++....
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 7889999999999999999998754321000 0011245788999999999887654
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.58 E-value=5.2e-15 Score=139.42 Aligned_cols=127 Identities=25% Similarity=0.312 Sum_probs=98.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc--CCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~--~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||||||+|.++..+++. .++++| +++.+++.++++ ..++.+...|...+++++++||+|+|.. +++|
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD-----~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 128 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKAVGVD-----ISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAIN-SLEW 128 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEE-----SCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEES-CTTS
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeEEEEE-----CCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcC-hHhh
Confidence 38999999999999999986 355554 455666677665 4578888999999999899999999998 5888
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhh--H-----------HHHHHHHHHHHhcCeEEEeee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN--R-----------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~--~-----------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.++...+++++.++|||||+++++.+......... . ..-.++.+++++.||+++...
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 89999999999999999999999875432111100 0 012378899999999988764
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=7.9e-15 Score=135.34 Aligned_cols=130 Identities=11% Similarity=0.108 Sum_probs=95.6
Q ss_pred eEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
+|||+|||+|.++..+++. .++++|+++..+..+.... ...+ .++.+...|...+++++++||+|+|+. +++|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNI-ADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG-SVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES-CGGG
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHH-HhccccCceEEEEcCHHHCCCCcccccEEEECc-hHhh
Confidence 8999999999999999875 5666666655544443222 2223 368899999999999999999999998 5777
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChh---------------------hHHHHHHHHHHHHhcCeEEEeee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE---------------------NRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~---------------------~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.++...+++++.++|||||+++++++........ ....-.++.+++++.||+.+...
T Consensus 124 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 124 WEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred ccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 7999999999999999999999986442210000 00112578889999999765543
No 18
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.58 E-value=8e-16 Score=148.38 Aligned_cols=96 Identities=26% Similarity=0.370 Sum_probs=79.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||||||+|.++..|++. .|+|+|++ +.|++.|++ ..++.+.+.+++.+|+++++||+|+|+. ++||.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s-----~~ml~~a~~-~~~v~~~~~~~e~~~~~~~sfD~v~~~~-~~h~~- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPG-----EAQIRQALR-HPRVTYAVAPAEDTGLPPASVDVAIAAQ-AMHWF- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESC-----HHHHHTCCC-CTTEEEEECCTTCCCCCSSCEEEEEECS-CCTTC-
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCc-----HHhhhhhhh-cCCceeehhhhhhhcccCCcccEEEEee-ehhHh-
Confidence 38999999999999999985 46666555 555555543 4578999999999999999999999998 47885
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
+.+++++++.|+|||||.|++.....
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 68899999999999999999876443
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.58 E-value=1.5e-14 Score=134.32 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=100.9
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++. .++++|+++.++..+..........++.+...|...+++++++||+|+|+. +++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF-TFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES-CGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh-hhh
Confidence 38999999999999888763 578888887766555544433333468899999999998889999999998 577
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCC----ChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAH----DPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~----~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+.++...+++++.++|||||++++++...... .......-.++.+++++.||+++...
T Consensus 118 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 118 ELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp GCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred hcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 77899999999999999999999976442211 11111134578899999999987654
No 20
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.58 E-value=7.8e-15 Score=141.37 Aligned_cols=133 Identities=18% Similarity=0.338 Sum_probs=100.2
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||||||+|.++..+++. .++++|+++..+..+..........++.+...|...+++++++||+|+|+. ++++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 117 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF-VLEH 117 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES-CGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec-hhhh
Confidence 48999999999999998864 578888877666554433322223468888999999999899999999998 5888
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCC-----CCChhhHHHH-----------------HHHHHHHHhcCeEEEeeec
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAY-----AHDPENRRIW-----------------NAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~-----~~~~~~~~~~-----------------~~l~~l~~~~gf~~v~~~~ 179 (444)
.++...+++++.++|||||++++.++... .........| ..+..+++++||+.+....
T Consensus 118 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 118 LQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 89999999999999999999999875421 1111111112 3677789999998887654
No 21
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.57 E-value=7.2e-15 Score=139.81 Aligned_cols=129 Identities=16% Similarity=0.256 Sum_probs=99.2
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc--CCCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~--~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
..+|||+|||+|.++..+++. .++++|++ +.+++.++++ ..++.+...|...+++++++||+|+|+. ++
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s-----~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 118 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLS-----ERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSL-AL 118 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEES-CG
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECC-----HHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEch-hh
Confidence 348999999999999999885 45566555 5555666665 3578899999999999889999999998 58
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEEcCCCCC---------CChhh----------------------------HHHHHH
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA---------HDPEN----------------------------RRIWNA 162 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~---------~~~~~----------------------------~~~~~~ 162 (444)
++.++...+++++.++|||||+++++.+.+.. ..... .....+
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 198 (253)
T 3g5l_A 119 HYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTT 198 (253)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHH
T ss_pred hhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHH
Confidence 88899999999999999999999997543210 00000 003467
Q ss_pred HHHHHHhcCeEEEeeec
Q 013393 163 MYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 163 l~~l~~~~gf~~v~~~~ 179 (444)
+.++++++||+++....
T Consensus 199 ~~~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 199 YIQTLLKNGFQINSVIE 215 (253)
T ss_dssp HHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHcCCeeeeeec
Confidence 88999999999887654
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.56 E-value=2.3e-14 Score=141.22 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=99.3
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..++++ .|+|+|+++.++..+..+ +...+. ++.+...|...+|+++++||+|+|+. +++
T Consensus 119 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~ 196 (312)
T 3vc1_A 119 DTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRR-ARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE-STM 196 (312)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES-CGG
T ss_pred CEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhcCCCCCCCEeEEEECC-chh
Confidence 48999999999999999874 677887777665444432 233343 58899999999999889999999998 477
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCC---hhhHH-----------HHHHHHHHHHhcCeEEEeeecc
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD---PENRR-----------IWNAMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~---~~~~~-----------~~~~l~~l~~~~gf~~v~~~~~ 180 (444)
+. +...+++++.++|||||++++.++...... ..... .-.++.+++++.||+++.....
T Consensus 197 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 197 YV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp GS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred hC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 76 689999999999999999999774432211 11111 1247889999999998877653
No 23
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.56 E-value=5.6e-15 Score=139.79 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=95.1
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccCCCCCCCccEEEecc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
..+|||||||+|.++..+++. .++++|+++.+ ++.++++ ..++.+...|...+++++++||+|+|..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~-----~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDF-----LVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHH-----HHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHH-----HHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 458999999999999998875 46666666544 4444443 2346788888888888888999999998
Q ss_pred ccccccccHH--HHHHHHHhhcCCCeEEEEEcCCCCC-----C-ChhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 117 CRIDWLQRDG--ILLLELDRLLRPGGYFVYSSPEAYA-----H-DPENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 117 ~~l~~~~d~~--~~L~ei~rvLkPGG~lvis~p~~~~-----~-~~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
++++.++.. .+++++.++|||||+++++++.... . .......-.++.+++++.||+++....
T Consensus 155 -~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 155 -VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred -hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 577777744 8999999999999999997653221 0 000011345788999999998877654
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.56 E-value=9.9e-15 Score=134.94 Aligned_cols=125 Identities=14% Similarity=0.191 Sum_probs=93.8
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
+|||+|||+|.++..+++. .++++|+ ++.+++.+++.+ .++.+...|...+ +++++||+|+|+. +++|.+
T Consensus 49 ~vLdiG~G~G~~~~~l~~~~~~v~~~D~-----s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~-~l~~~~ 121 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGLADRVTALDG-----SAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH-WLAHVP 121 (218)
T ss_dssp EEEEESCTTSHHHHHHHHHSSEEEEEES-----CHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEES-CGGGSC
T ss_pred eEEEECCCCCHHHHHHHhcCCeEEEEeC-----CHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEec-hhhcCC
Confidence 8999999999999999875 4556555 455666666666 5788889998887 7789999999998 588877
Q ss_pred cH--HHHHHHHHhhcCCCeEEEEEcCCCCCCCh-----------------hh--------HHHHHHHHHHHHhcCeEEEe
Q 013393 124 RD--GILLLELDRLLRPGGYFVYSSPEAYAHDP-----------------EN--------RRIWNAMYDLLKSMCWKIVS 176 (444)
Q Consensus 124 d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~~-----------------~~--------~~~~~~l~~l~~~~gf~~v~ 176 (444)
+. ..+++++.++|||||+++++++....... .. ...-.++.++++++||++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 201 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSV 201 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEe
Confidence 75 78999999999999999998654310000 00 00225788999999998655
Q ss_pred ee
Q 013393 177 KK 178 (444)
Q Consensus 177 ~~ 178 (444)
..
T Consensus 202 ~~ 203 (218)
T 3ou2_A 202 DE 203 (218)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 25
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.55 E-value=8.8e-15 Score=143.34 Aligned_cols=143 Identities=11% Similarity=0.172 Sum_probs=99.8
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .|+|+|+++.++..+.... ...+. ++.+...|...+ +++||+|+|+. +++
T Consensus 74 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~-~~~ 148 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMF-DEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG-AFE 148 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH-HHSCCSSCEEEEECCGGGC---CCCCSEEEEES-CGG
T ss_pred CEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECCHHHc---CCCccEEEEcc-hHH
Confidence 38999999999999999874 5777777766554444322 22333 578888888766 68999999998 577
Q ss_pred ccccH---------HHHHHHHHhhcCCCeEEEEEcCCCCCCChhh--------------------------HHHHHHHHH
Q 013393 121 WLQRD---------GILLLELDRLLRPGGYFVYSSPEAYAHDPEN--------------------------RRIWNAMYD 165 (444)
Q Consensus 121 ~~~d~---------~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~--------------------------~~~~~~l~~ 165 (444)
+.+++ ..+++++.++|||||++++.+.......... ...-.++.+
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~ 228 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDY 228 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHH
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHH
Confidence 77544 7999999999999999999764422110000 001236788
Q ss_pred HHHhcCeEEEeeecceeEeeccCchhhH
Q 013393 166 LLKSMCWKIVSKKDQTVIWAKPISNSCY 193 (444)
Q Consensus 166 l~~~~gf~~v~~~~~~~~w~k~l~~~c~ 193 (444)
++++.||+++........|.+++..+..
T Consensus 229 ~l~~aGf~~~~~~~~~~~y~~tl~~w~~ 256 (302)
T 3hem_A 229 YSSNAGWKVERYHRIGANYVPTLNAWAD 256 (302)
T ss_dssp HHHHHTCEEEEEEECGGGHHHHHHHHHH
T ss_pred HHHhCCcEEEEEEeCchhHHHHHHHHHH
Confidence 9999999988877655555555444433
No 26
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=4e-15 Score=139.75 Aligned_cols=97 Identities=14% Similarity=0.299 Sum_probs=77.6
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~~sFDlI~~~~~ 117 (444)
..+|||+|||+|.++..+++. .++++|+++ .+++.++++. .++.+...|...++++ ++||+|+|+.
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~- 117 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSE-----KMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSAL- 117 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCH-----HHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEES-
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeC-
Confidence 358999999999999999874 466666655 4555555542 2788889999998887 8999999998
Q ss_pred cccccccHH--HHHHHHHhhcCCCeEEEEEcCC
Q 013393 118 RIDWLQRDG--ILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 118 ~l~~~~d~~--~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++++.++.. .+++++.++|||||+++++++.
T Consensus 118 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 118 SIHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 577777665 5999999999999999998754
No 27
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.54 E-value=9.5e-15 Score=138.61 Aligned_cols=129 Identities=14% Similarity=0.157 Sum_probs=95.4
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCCCCccEEEecccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
..+|||||||+|.++..+++. .++++|+++ .+++.++++. .++.+...|...+++++++||+|+|+. +
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 167 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVK-----HMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW-T 167 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCH-----HHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES-C
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCH-----HHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc-h
Confidence 348999999999999988764 366776665 4445555543 457888889888998889999999998 4
Q ss_pred cccc--ccHHHHHHHHHhhcCCCeEEEEEcCCCCCC-------ChhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 119 IDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAH-------DPENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 119 l~~~--~d~~~~L~ei~rvLkPGG~lvis~p~~~~~-------~~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
++|. ++...+++++.++|||||+++++++..... .......-.++.+++++.||+++....
T Consensus 168 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 168 AIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 7777 457799999999999999999987421110 000011235788999999998876643
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.54 E-value=5.2e-14 Score=131.40 Aligned_cols=128 Identities=20% Similarity=0.290 Sum_probs=95.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc----CC------CcEEEEecCccCCCCCCCccEEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GI------PSTLGVLGTKRLPYPSRSFELAH 113 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~----~~------~~~~~~~d~~~lp~~~~sFDlI~ 113 (444)
.+|||+|||+|.++..+++. .++++|++ +.+++.++++ +. ++.+...|...+++++++||+|+
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGYSVTGIDIN-----SEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 38999999999999999886 45566555 4555555553 22 36788889988998889999999
Q ss_pred eccccccccccHH---HHHHHHHhhcCCCeEEEEEcCCCCCCChhh--------------------------------HH
Q 013393 114 CSRCRIDWLQRDG---ILLLELDRLLRPGGYFVYSSPEAYAHDPEN--------------------------------RR 158 (444)
Q Consensus 114 ~~~~~l~~~~d~~---~~L~ei~rvLkPGG~lvis~p~~~~~~~~~--------------------------------~~ 158 (444)
|+. ++++.++.. .+++++.++|||||+++++++......... ..
T Consensus 107 ~~~-~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 107 MQA-FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp EES-CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred Ecc-hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 998 577777777 899999999999999999865432111110 01
Q ss_pred HHHHHHHHHHhcCeEEEeeec
Q 013393 159 IWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 159 ~~~~l~~l~~~~gf~~v~~~~ 179 (444)
.-.++.++++++||+++....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEe
Confidence 235788899999998887654
No 29
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.54 E-value=1.4e-14 Score=140.56 Aligned_cols=139 Identities=12% Similarity=0.166 Sum_probs=96.0
Q ss_pred CeEEEECCCcchHHHHHhh---CCceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~---~~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++ ..|+|+|+++.++..+.... .+.+ .++.+...|...+| ++||+|+|.. +++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~-~l~ 140 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRVLLAGWEQFD---EPVDRIVSIG-AFE 140 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEEEESCGGGCC---CCCSEEEEES-CGG
T ss_pred CEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEEEECChhhCC---CCeeEEEEeC-chh
Confidence 3899999999999999884 25677766665443333222 2223 36788888887765 7899999998 577
Q ss_pred cc--ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCCh---------hhH-----------------HHHHHHHHHHHhcCe
Q 013393 121 WL--QRDGILLLELDRLLRPGGYFVYSSPEAYAHDP---------ENR-----------------RIWNAMYDLLKSMCW 172 (444)
Q Consensus 121 ~~--~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~---------~~~-----------------~~~~~l~~l~~~~gf 172 (444)
|. ++...+++++.++|||||+++++++....... ... ..-.++.+++++.||
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 220 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGF 220 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTC
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCc
Confidence 76 67889999999999999999997654221000 000 012477888999999
Q ss_pred EEEeeecceeEeeccCc
Q 013393 173 KIVSKKDQTVIWAKPIS 189 (444)
Q Consensus 173 ~~v~~~~~~~~w~k~l~ 189 (444)
+++........|.+++.
T Consensus 221 ~~~~~~~~~~~y~~~~~ 237 (287)
T 1kpg_A 221 TVTRVQSLQPHYAKTLD 237 (287)
T ss_dssp EEEEEEECHHHHHHHHH
T ss_pred EEEEEEeCcHhHHHHHH
Confidence 98887654444444433
No 30
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=8.9e-15 Score=135.54 Aligned_cols=131 Identities=11% Similarity=0.019 Sum_probs=86.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHH------------cCCCcEEEEecCccCCCCC-CCcc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALE------------RGIPSTLGVLGTKRLPYPS-RSFE 110 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e------------~~~~~~~~~~d~~~lp~~~-~sFD 110 (444)
.+|||+|||+|..+..|++. .|+|+|+|+.++..++.+.... ...++.+.+.|+..+++++ ++||
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD 103 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCA 103 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEE
T ss_pred CEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEE
Confidence 38999999999999999875 4667766665554333211100 1347889999999998765 7999
Q ss_pred EEEecccccccccc--HHHHHHHHHhhcCCCeEEEEEcCCCCC---CChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 111 LAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 111 lI~~~~~~l~~~~d--~~~~L~ei~rvLkPGG~lvis~p~~~~---~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+|+++.+ +++.+. ...+++++.|+|||||++++.+..... ..+.....-.++.+++++ ||++....
T Consensus 104 ~v~~~~~-l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 104 AFYDRAA-MIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp EEEEESC-GGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred EEEECcc-hhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 9999874 555543 357999999999999984443211100 000000123467777877 99876544
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=3.6e-14 Score=137.28 Aligned_cols=98 Identities=15% Similarity=0.316 Sum_probs=81.5
Q ss_pred CCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
..+|||||||+|.++..+++. .++|+|++ +.+++.++++..++.+...|...+|+ +++||+|+|+. +++|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s-----~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~~~ 130 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGAEVLGTDNA-----ATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-MLHWV 130 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES-CGGGC
T ss_pred CCEEEEecCCCCHHHHHHHhCCCeEEEEECC-----HHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc-hhhhC
Confidence 348999999999999999874 45566554 55666666666678899999998887 57999999998 58888
Q ss_pred ccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 123 QRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 123 ~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
++...+++++.++|||||+++++.+..
T Consensus 131 ~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 131 KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999999999999999999987653
No 32
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=4.2e-14 Score=134.50 Aligned_cols=97 Identities=20% Similarity=0.316 Sum_probs=81.9
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .++++|+++ .+++.++++..++.+...|...++ ++++||+|+|+. +++|
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~ 107 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD-----DMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANA-VFQW 107 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH-----HHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEES-CGGG
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeC-chhh
Confidence 48999999999999988763 677776665 455666666678899999998888 778999999998 5888
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
.++...+++++.++|||||+++++.+..
T Consensus 108 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 108 VPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp STTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 8999999999999999999999987653
No 33
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.53 E-value=3.3e-14 Score=137.85 Aligned_cols=133 Identities=19% Similarity=0.266 Sum_probs=97.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCC-CCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLP-YPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp-~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .++|+|+++.++..+.... ...+ .++.+...|...++ +++++||+|+|+. +++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-~l~ 147 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAA-EAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA-VLE 147 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES-CGG
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc-hhh
Confidence 48999999999999999886 5677776665544333222 2223 35788899988887 7789999999998 588
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCC-------------------C------ChhhHHHHHHHHHHHHhcCeEEE
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------------H------DPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~-------------------~------~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
|.++...+++++.++|||||++++..+.... . .......-.++.++++++||+++
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~ 227 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIM 227 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEE
T ss_pred cccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCcee
Confidence 8899999999999999999999997653110 0 00000112578899999999988
Q ss_pred eeecc
Q 013393 176 SKKDQ 180 (444)
Q Consensus 176 ~~~~~ 180 (444)
.....
T Consensus 228 ~~~~~ 232 (285)
T 4htf_A 228 GKTGV 232 (285)
T ss_dssp EEEEE
T ss_pred eeeeE
Confidence 77653
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.53 E-value=1.5e-14 Score=133.86 Aligned_cols=126 Identities=17% Similarity=0.209 Sum_probs=93.3
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .++++|+++ .+++.++++. ++.+...|...++ ++++||+|+|+. ++++..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~~ 116 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGFDVDATDGSP-----ELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHA-CLLHVP 116 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECS-CGGGSC
T ss_pred CcEEEECCCCCHHHHHHHHcCCeEEEECCCH-----HHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecC-chhhcC
Confidence 38999999999999999886 456665554 4555555542 4566778888888 778999999998 477766
Q ss_pred --cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChh------hHHHHHHHHHHHHhcC-eEEEeeec
Q 013393 124 --RDGILLLELDRLLRPGGYFVYSSPEAYAHDPE------NRRIWNAMYDLLKSMC-WKIVSKKD 179 (444)
Q Consensus 124 --d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~------~~~~~~~l~~l~~~~g-f~~v~~~~ 179 (444)
+...+++++.++|||||+++++.+........ ....-.++.+++++.| |+++....
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 117 RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 66799999999999999999986543211000 0112357889999999 98877653
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=3.1e-14 Score=135.56 Aligned_cols=94 Identities=17% Similarity=0.248 Sum_probs=78.9
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc----CCCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~----~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. .++++|+++ .+++.++++ ..++.+...|...+++++++||+|+|+. ++
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 114 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARGYRYIALDADA-----AMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVH-LW 114 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTTCEEEEEESCH-----HHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CG
T ss_pred CEEEEeCCcCCHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECC-ch
Confidence 48999999999999999875 456665554 455555544 4578899999999998889999999998 58
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEE
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis 145 (444)
||.++...+++++.++|||||+++++
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 88889999999999999999999987
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=2.6e-14 Score=133.08 Aligned_cols=133 Identities=18% Similarity=0.253 Sum_probs=92.7
Q ss_pred ecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHH
Q 013393 9 NFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFAL 86 (444)
Q Consensus 9 ~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~ 86 (444)
.+|.....+........+.+.+.+.. .+++ ..+|||+|||+|.++..+++. .++++|+++..+..+... +.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~---~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~ 81 (227)
T 1ve3_A 9 VFPTYTDINSQEYRSRIETLEPLLMK---YMKK---RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREY-AK 81 (227)
T ss_dssp HCSTTTCTTSHHHHHHHHHHHHHHHH---SCCS---CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HH
T ss_pred HhhhhhcccHHHHHHHHHHHHHHHHH---hcCC---CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HH
Confidence 45555555555444444444443321 2223 348999999999999999876 577777776555444422 23
Q ss_pred HcCCCcEEEEecCccCCCCCCCccEEEecccc-ccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 87 ERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR-IDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 87 e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~-l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
..+.++.+...|...+++++++||+|+|+.+. +++..+...+++++.++|||||++++..+.
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 82 SRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 33577899999998888888899999998731 333456779999999999999999997654
No 37
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.52 E-value=2.6e-14 Score=145.33 Aligned_cols=132 Identities=18% Similarity=0.185 Sum_probs=98.9
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHc----C----CCcEEEEecCccC------CCCC
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER----G----IPSTLGVLGTKRL------PYPS 106 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~----~----~~~~~~~~d~~~l------p~~~ 106 (444)
.+|||||||+|.++..+++. .|+|+|+++.++..+..+..... + .++.+...|...+ ++++
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~ 164 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPD 164 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCT
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCC
Confidence 48999999999999888763 57888777765544443322210 3 5788999998887 8889
Q ss_pred CCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhH--------------HHHHHHHHHHHhcCe
Q 013393 107 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR--------------RIWNAMYDLLKSMCW 172 (444)
Q Consensus 107 ~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~--------------~~~~~l~~l~~~~gf 172 (444)
++||+|+|+. ++++.++...+|+++.++|||||+|+++++.......... ....++.+++++.||
T Consensus 165 ~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF 243 (383)
T 4fsd_A 165 SSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGF 243 (383)
T ss_dssp TCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTC
T ss_pred CCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCC
Confidence 9999999988 5888899999999999999999999998654332211111 112688899999999
Q ss_pred EEEeee
Q 013393 173 KIVSKK 178 (444)
Q Consensus 173 ~~v~~~ 178 (444)
+.+...
T Consensus 244 ~~v~~~ 249 (383)
T 4fsd_A 244 RDVRLV 249 (383)
T ss_dssp CCEEEE
T ss_pred ceEEEE
Confidence 866543
No 38
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.51 E-value=5.1e-15 Score=151.67 Aligned_cols=162 Identities=11% Similarity=0.076 Sum_probs=109.0
Q ss_pred CeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHH
Q 013393 6 EKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFA 85 (444)
Q Consensus 6 ~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a 85 (444)
+|..+.+....+......+.+.+.+.+.. .+ ..+|||||||+|.++..++++.. .+.+.|+++.+++.|
T Consensus 77 ~y~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~---~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a 145 (416)
T 4e2x_A 77 VYPYHSSGSSVMREHFAMLARDFLATELT-----GP---DPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKA 145 (416)
T ss_dssp TCCCCGGGCHHHHHHHHHHHHHHHHTTTC-----SS---SCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHH
T ss_pred CccCcCcCCHHHHHHHHHHHHHHHHHhCC-----CC---CCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHH
Confidence 44444444444444445555555444432 22 33899999999999999998632 444556667777888
Q ss_pred HHcCCCcEE---EEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCC---------CCC
Q 013393 86 LERGIPSTL---GVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY---------AHD 153 (444)
Q Consensus 86 ~e~~~~~~~---~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~---------~~~ 153 (444)
++++.+... ...+...+++++++||+|+|+. +++|.++...+++++.++|||||++++..+... ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~-vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 224 (416)
T 4e2x_A 146 REKGIRVRTDFFEKATADDVRRTEGPANVIYAAN-TLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIF 224 (416)
T ss_dssp HTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEES-CGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCS
T ss_pred HHcCCCcceeeechhhHhhcccCCCCEEEEEECC-hHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhh
Confidence 877554332 1233455667778999999998 588889999999999999999999999876410 000
Q ss_pred hhh--HHHHHHHHHHHHhcCeEEEeeec
Q 013393 154 PEN--RRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 154 ~~~--~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
... ......+..++++.||+++....
T Consensus 225 ~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 225 DEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp TTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 000 11235789999999998876643
No 39
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.51 E-value=1.5e-13 Score=127.75 Aligned_cols=131 Identities=15% Similarity=0.176 Sum_probs=89.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC-----CCcEEEEecCccCCCCCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-----IPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~-----~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
.+|||||||+|.++..+++. .++|+|+++.++..+..+.....- .++.+...|...+++++++||+|+|+.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 110 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIE 110 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEES
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHH
Confidence 48999999999999999874 577777776555444432221111 167888889877887778999999998
Q ss_pred ccccccccH--HHHHHHHHhhcCCCeEEEEEcCCCC----CCCh------------hhHHHH-HHHHHHHHhcCeEEEee
Q 013393 117 CRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAY----AHDP------------ENRRIW-NAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 117 ~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~----~~~~------------~~~~~~-~~l~~l~~~~gf~~v~~ 177 (444)
++++.++. ..+++++.++|||||.++.+....+ ...+ .....+ .-+.+++++.||++...
T Consensus 111 -~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 111 -VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp -CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred -HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 57877755 6899999999999997665432211 0000 011111 13348899999977654
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.51 E-value=4.6e-14 Score=132.79 Aligned_cols=98 Identities=27% Similarity=0.451 Sum_probs=80.6
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
..+|||||||+|.++..+++. .++++|+ ++.+++.++++.. ++.+...|...+++++++||+|+|+. ++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 117 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDL-----SEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSL-AL 117 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEES-----CHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEES-CG
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcC-----CHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEec-cc
Confidence 348999999999999999875 3555554 5566667766633 57888889888888889999999998 57
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++.++...+++++.++|||||+++++.+.
T Consensus 118 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 118 HYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 88889999999999999999999997643
No 41
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.51 E-value=7e-14 Score=124.70 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=94.8
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccccH
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 125 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~ 125 (444)
.+|||+|||+|.++..+++.. ..+.+.|+++.+++.++++..++.+...| +++++++||+|+|+. ++++.++.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~-~l~~~~~~ 91 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFAN-SFHDMDDK 91 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEES-CSTTCSCH
T ss_pred CeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEcc-chhcccCH
Confidence 389999999999999998863 25555566677777777777778888777 777889999999998 57888899
Q ss_pred HHHHHHHHhhcCCCeEEEEEcCCCCCCC----hhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 126 GILLLELDRLLRPGGYFVYSSPEAYAHD----PENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 126 ~~~L~ei~rvLkPGG~lvis~p~~~~~~----~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
..+++++.++|||||++++.+....... ......-.++.++++ ||+++....
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 9999999999999999999864422110 111112346777777 999887654
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=1.1e-13 Score=132.57 Aligned_cols=95 Identities=19% Similarity=0.283 Sum_probs=78.4
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||||||+|.++..+++. .++|+ |+++.+++.|+++..++.+...|...+++ +++||+|+|+..+++|..
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gv-----D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGL-----ELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEE-----ESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEE-----ECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 48999999999999999886 34555 45566677777776788999999998887 689999999874577764
Q ss_pred ---cHHHHHHHHHhhcCCCeEEEEEc
Q 013393 124 ---RDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 124 ---d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+...+++++.++|||||++++..
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 55689999999999999999963
No 43
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=1e-13 Score=129.29 Aligned_cols=124 Identities=18% Similarity=0.224 Sum_probs=96.5
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccccH
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 125 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~ 125 (444)
.+|||+|||+|.++..+++. +++|+++ .+++.++++ ++.+...|...+++++++||+|+|.. ++++.++.
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~~vD~s~-----~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~ 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--IGVEPSE-----RMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDDP 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--EEEESCH-----HHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSCH
T ss_pred CcEEEeCCCCCHHHHHHHHH--hccCCCH-----HHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcc-hHhhccCH
Confidence 38999999999999999876 6776665 455666665 67788889888898888999999998 58888999
Q ss_pred HHHHHHHHhhcCCCeEEEEEcCCCCCCCh---------------hhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 126 GILLLELDRLLRPGGYFVYSSPEAYAHDP---------------ENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 126 ~~~L~ei~rvLkPGG~lvis~p~~~~~~~---------------~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
..+++++.++|+|||+++++.+....... .......++.+++++.||+++....
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999998765321100 0001235788999999998876643
No 44
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.50 E-value=2.5e-13 Score=126.20 Aligned_cols=130 Identities=16% Similarity=0.199 Sum_probs=89.2
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC------CcEEEEecCccCCCCCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI------PSTLGVLGTKRLPYPSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~------~~~~~~~d~~~lp~~~~sFDlI~~~ 115 (444)
.+|||+|||+|.++..+++. .++|+|+++.++..+..+.. ..+. ++.+...|....+.++++||+|+|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD-RLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT-TCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH-HhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 48999999999999999874 57777777655544432221 1121 6788888887777777899999999
Q ss_pred cccccccccH--HHHHHHHHhhcCCCeEEEEEcCCCC-------C----CCh-----hhHHHH-HHHHHHHHhcCeEEEe
Q 013393 116 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAY-------A----HDP-----ENRRIW-NAMYDLLKSMCWKIVS 176 (444)
Q Consensus 116 ~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~-------~----~~~-----~~~~~~-~~l~~l~~~~gf~~v~ 176 (444)
. +++|.++. ..+++++.++|||||+++++....+ . +.. .....+ ..+.+++++.||++..
T Consensus 110 ~-~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 110 E-VIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQF 188 (217)
T ss_dssp S-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEE
T ss_pred H-HHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEE
Confidence 8 57777755 7999999999999997776543211 0 000 011111 2345889999998765
Q ss_pred e
Q 013393 177 K 177 (444)
Q Consensus 177 ~ 177 (444)
.
T Consensus 189 ~ 189 (217)
T 3jwh_A 189 Q 189 (217)
T ss_dssp C
T ss_pred E
Confidence 4
No 45
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=2.8e-14 Score=139.31 Aligned_cols=103 Identities=8% Similarity=0.106 Sum_probs=69.9
Q ss_pred CCeEEEECCCcchHHHHH----hh--CCc----eEEEcCcccchHHHHHHHHHcCC-CcEEE--EecCccCC------CC
Q 013393 45 IRNVLDVGCGVASFGAYL----LS--HDI----IAMSLAPNDVHENQIQFALERGI-PSTLG--VLGTKRLP------YP 105 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~L----a~--~~V----~gvdis~~dis~a~i~~a~e~~~-~~~~~--~~d~~~lp------~~ 105 (444)
..+|||||||+|.++..+ +. ..+ +++|.++.++..+..+.+...+. ++.+. ..+.+.++ ++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 348999999999766543 22 133 66666655554443222211122 33443 33444433 56
Q ss_pred CCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 106 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+++||+|+|+. ++||.+|+..+|+++.|+|||||++++....
T Consensus 133 ~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 133 LQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCceeEEEEee-eeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 78999999999 5899999999999999999999999997543
No 46
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=1.8e-13 Score=123.73 Aligned_cols=125 Identities=16% Similarity=0.234 Sum_probs=96.5
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc--c
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL--Q 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~--~ 123 (444)
.+|||+|||+|.++..+++.. .++.+.|+++.+++.++++..++.+...|...+++++++||+|+|+..++++. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChH
Confidence 389999999999999998862 13444455566667777776778899999888888888999999984357765 3
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+...++.++.++|+|||++++..+..... ...++.+++++.||+++....
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAGRGW------VFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETTSSC------CHHHHHHHHHHHTEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCCCc------CHHHHHHHHHHcCCEEeeeec
Confidence 44789999999999999999977653222 235678889999998876643
No 47
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.49 E-value=5.7e-14 Score=137.36 Aligned_cols=100 Identities=20% Similarity=0.229 Sum_probs=78.9
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC----CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG----IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~----~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+|||||||+|.++..+++. .|+++|+++.++..+..+. ...+ .++.+...|...+++ +++||+|+|+..+++
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~ 162 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRL-AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSIN 162 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHH-HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHT
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-hhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccc
Confidence 7999999999999999885 6778877766554443222 2223 568899999999887 689999998866777
Q ss_pred ccc--cHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 121 WLQ--RDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 121 ~~~--d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+.. +...+|+++.++|||||+|+++.+.
T Consensus 163 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 163 ELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 755 3478999999999999999997654
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.48 E-value=6.1e-14 Score=130.06 Aligned_cols=128 Identities=20% Similarity=0.241 Sum_probs=93.8
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC---CCC-CCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYP-SRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l---p~~-~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++.. ..+.+.|+++.+++.++++ .+..+...+...+ ++. +++||+|+|+.+ ++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~-l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFA-LL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC-CC-
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECch-hh-
Confidence 489999999999999998862 1333445556666777776 5566777776665 544 445999999984 66
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChh-----------------------hHHHHHHHHHHHHhcCeEEEeee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------------NRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~-----------------------~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
..+...+++++.++|||||+++++++........ ......++.++++++||+++...
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 6889999999999999999999988654321110 00134688899999999988764
Q ss_pred c
Q 013393 179 D 179 (444)
Q Consensus 179 ~ 179 (444)
.
T Consensus 208 ~ 208 (227)
T 3e8s_A 208 E 208 (227)
T ss_dssp C
T ss_pred c
Confidence 3
No 49
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=2.4e-13 Score=123.08 Aligned_cols=131 Identities=11% Similarity=0.005 Sum_probs=81.7
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC-CCCCCccEEEeccccccc--
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHCSRCRIDW-- 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp-~~~~sFDlI~~~~~~l~~-- 121 (444)
+|||+|||+|.++..+++. .|+|+|+++.++..+..+.....-.++.+...+...++ +++++||+|+++...++.
T Consensus 25 ~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~ 104 (185)
T 3mti_A 25 IVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSAD 104 (185)
T ss_dssp EEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC------
T ss_pred EEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcc
Confidence 8999999999999999875 67888888776655554333322246777776666643 457889999987433332
Q ss_pred ------cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 122 ------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 122 ------~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
..+...+++++.++|||||++++.................+....+...+|.+...
T Consensus 105 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (185)
T 3mti_A 105 KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLY 166 (185)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEe
Confidence 13345789999999999999999764422111111122223333334445765544
No 50
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=8.2e-14 Score=131.13 Aligned_cols=127 Identities=17% Similarity=0.125 Sum_probs=92.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC------CCcEEEEecCccCCCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG------IPSTLGVLGTKRLPYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~------~~~~~~~~d~~~lp~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++. .|+|+|+ ++.+++.++++. .++.+...|...++ ++++||+|+|+.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~-----s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~- 140 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDI-----SESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYV- 140 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECS-----CHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEES-
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEEC-----CHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEECh-
Confidence 38999999999999999875 3455555 455555555542 24788888988877 456899999988
Q ss_pred cccccc--cHHHHHHHHHhhcCCCeEEEEEcCCCCCCC--hhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 118 RIDWLQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 118 ~l~~~~--d~~~~L~ei~rvLkPGG~lvis~p~~~~~~--~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
++++.+ +...+++++.++|||||++++......... +.......++.+++++.||+++....
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 477766 778999999999999999998664322110 00001235788999999999877643
No 51
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.47 E-value=3.6e-13 Score=126.59 Aligned_cols=120 Identities=18% Similarity=0.295 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEec
Q 013393 21 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 98 (444)
Q Consensus 21 ~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d 98 (444)
...+.+.+.+.+... . ....+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+.++.+...|
T Consensus 20 ~~~~~~~~~~~l~~~---~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d 92 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN---N---LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHHHTT---T---CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHHHh---C---CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEecc
Confidence 455556666666531 1 12348999999999999999875 4677776665554444322 2234478888999
Q ss_pred CccCCCCCCCccEEEecccccccc---ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 99 TKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 99 ~~~lp~~~~sFDlI~~~~~~l~~~---~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
...++++ ++||+|+|+..+++|. ++...+++++.++|||||+++++.+.
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 8888877 8899999987247776 56779999999999999999996543
No 52
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.47 E-value=7.5e-14 Score=137.57 Aligned_cols=99 Identities=11% Similarity=0.183 Sum_probs=75.4
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .|+|+|+++.++..+.... .+.+ .++.+...|...+| ++||+|+|.. +++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~-~l~ 166 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVL-ASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE-AFE 166 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTSCCSSCEEEEESCGGGCC---CCCSEEEEES-CGG
T ss_pred CEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECChHHCC---CCcCEEEEeC-hHH
Confidence 38999999999999998864 5677776665544333222 2223 34788888887775 7899999998 577
Q ss_pred cc--ccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 121 WL--QRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 121 ~~--~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
|. ++...+++++.++|||||+++++++..
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 76 678899999999999999999987653
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=9.1e-14 Score=136.50 Aligned_cols=131 Identities=18% Similarity=0.156 Sum_probs=92.8
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
.+|||||||+|.++..++. ..++++|+++.++..+..+. ...+. ++.+...|...++++ ++||+|+|+. +
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~-~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA-AGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG-L 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS-S
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECchhcCCcc-CCeEEEEECC-h
Confidence 3899999999999999852 25677776665443333221 12232 278889999999987 8999999988 4
Q ss_pred ccccccHHH---HHHHHHhhcCCCeEEEEEcCCCCC------------CChhh------------------HHHHHHHHH
Q 013393 119 IDWLQRDGI---LLLELDRLLRPGGYFVYSSPEAYA------------HDPEN------------------RRIWNAMYD 165 (444)
Q Consensus 119 l~~~~d~~~---~L~ei~rvLkPGG~lvis~p~~~~------------~~~~~------------------~~~~~~l~~ 165 (444)
++|.++... +++++.++|||||+++++...... ..... ...-.++.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 777667664 799999999999999998733210 00000 012357889
Q ss_pred HHHhcCeEEEeeec
Q 013393 166 LLKSMCWKIVSKKD 179 (444)
Q Consensus 166 l~~~~gf~~v~~~~ 179 (444)
++++.||+++....
T Consensus 277 ~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 277 QLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCEEEEEEc
Confidence 99999999887654
No 54
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.46 E-value=3.4e-13 Score=126.53 Aligned_cols=96 Identities=22% Similarity=0.323 Sum_probs=77.9
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc-
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL- 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~- 122 (444)
.+|||+|||+|.++..+++. .++++|++ +.+++.++++..++.+...|...+++ +++||+|+|+..+++|.
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s-----~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFGDTAGLELS-----EDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHSEEEEEESC-----HHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCC
T ss_pred CeEEEecccCCHHHHHHHHhCCcEEEEeCC-----HHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcC
Confidence 48999999999999999874 46666554 55666777776678899999888887 67899999876567776
Q ss_pred --ccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 123 --QRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 123 --~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
++...+++++.++|||||+++++.+
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4556899999999999999999754
No 55
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.46 E-value=2.5e-13 Score=125.89 Aligned_cols=99 Identities=22% Similarity=0.368 Sum_probs=78.2
Q ss_pred CCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
..+|||+|||+|.++..+++. +..+.+.|+++.+++.++++. .++.+...|...++ ++++||+|+|+. +++|
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~ 126 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAE-VLYY 126 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEES-CGGG
T ss_pred CCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEcc-HHHh
Confidence 348999999999999999886 234444455556666666652 36788899988888 678999999998 5888
Q ss_pred cccH---HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 122 LQRD---GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 122 ~~d~---~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.++. ..+++++.++|||||+++++++.
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 7776 47799999999999999997654
No 56
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=2.3e-13 Score=125.61 Aligned_cols=97 Identities=26% Similarity=0.403 Sum_probs=81.4
Q ss_pred CeEEEECCCcchHHHHHhhC-CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 124 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d 124 (444)
.+|||+|||+|.++..+ .. .++++|++ +.+++.++++..++.+...|...+|+++++||+|+|+. +++|.++
T Consensus 38 ~~vLdiG~G~G~~~~~l-~~~~v~~vD~s-----~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 110 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL-PYPQKVGVEPS-----EAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFT-TLEFVED 110 (211)
T ss_dssp SEEEEETCTTCHHHHHC-CCSEEEEECCC-----HHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEES-CTTTCSC
T ss_pred CeEEEECCCCCHhHHhC-CCCeEEEEeCC-----HHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcC-hhhhcCC
Confidence 48999999999999888 44 56666555 55566666665678888899989999889999999998 5888889
Q ss_pred HHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 125 DGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 125 ~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
...+++++.++|||||+++++++..
T Consensus 111 ~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 111 VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9999999999999999999988764
No 57
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=1.1e-13 Score=131.22 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHH----cCCCcE
Q 013393 21 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE----RGIPST 93 (444)
Q Consensus 21 ~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e----~~~~~~ 93 (444)
-..+.+.+++.+.. +| .+|||||||+|..+.++++. .++++|+++ .+++.|++ .+.++.
T Consensus 46 e~~~m~~~a~~~~~------~G---~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~-----~~~~~a~~~~~~~~~~~~ 111 (236)
T 3orh_A 46 ETPYMHALAAAASS------KG---GRVLEVGFGMAIAASKVQEAPIDEHWIIECND-----GVFQRLRDWAPRQTHKVI 111 (236)
T ss_dssp GHHHHHHHHHHHTT------TC---EEEEEECCTTSHHHHHHTTSCEEEEEEEECCH-----HHHHHHHHHGGGCSSEEE
T ss_pred HHHHHHHHHHhhcc------CC---CeEEEECCCccHHHHHHHHhCCcEEEEEeCCH-----HHHHHHHHHHhhCCCceE
Confidence 34566666666642 23 38999999999999999875 355665555 44455544 355667
Q ss_pred EEEecCccC--CCCCCCccEEEec----cccccccccHHHHHHHHHhhcCCCeEEEEEcCCC-----CCCChhhHHHH-H
Q 013393 94 LGVLGTKRL--PYPSRSFELAHCS----RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA-----YAHDPENRRIW-N 161 (444)
Q Consensus 94 ~~~~d~~~l--p~~~~sFDlI~~~----~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~-----~~~~~~~~~~~-~ 161 (444)
+...+.+.+ ++++++||.|++- ....++..+...+++++.|+|||||+|++..... ..........+ .
T Consensus 112 ~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~ 191 (236)
T 3orh_A 112 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEE 191 (236)
T ss_dssp EEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHH
T ss_pred EEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHH
Confidence 777775543 5778999999752 1134556788899999999999999999843110 00011111122 2
Q ss_pred HHHHHHHhcCeEEEee
Q 013393 162 AMYDLLKSMCWKIVSK 177 (444)
Q Consensus 162 ~l~~l~~~~gf~~v~~ 177 (444)
.....+.+.||++...
T Consensus 192 ~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 192 TQVPALLEAGFRRENI 207 (236)
T ss_dssp HTHHHHHHHTCCGGGE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 3455677789975544
No 58
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.45 E-value=4.2e-13 Score=124.39 Aligned_cols=109 Identities=21% Similarity=0.291 Sum_probs=90.2
Q ss_pred CeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccccH
Q 013393 46 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 125 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~ 125 (444)
.+|||||||+|.++..++ ..++++|+++. ++.+...|...+|+++++||+|+|+.+ +|+ .+.
T Consensus 69 ~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~-~~~ 130 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS-LMG-TNI 130 (215)
T ss_dssp SCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC-CCS-SCH
T ss_pred CeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh-ccc-cCH
Confidence 379999999999998885 68999999885 456778888888888899999999884 665 888
Q ss_pred HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 126 GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 126 ~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
..+++++.++|+|||+++++++..... .-.++.+++++.||+++...
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEe
Confidence 999999999999999999986543211 23578889999999987754
No 59
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.44 E-value=2.6e-13 Score=132.76 Aligned_cols=133 Identities=14% Similarity=0.217 Sum_probs=89.2
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc--------------------------------
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-------------------------------- 88 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-------------------------------- 88 (444)
.++|||||||+|.++..+++. .|+|+|+++.++..+..+.....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 348999999999999999874 57778777655544432211100
Q ss_pred --------------------------CCCcEEEEecCccCC-----CCCCCccEEEeccccccccc------cHHHHHHH
Q 013393 89 --------------------------GIPSTLGVLGTKRLP-----YPSRSFELAHCSRCRIDWLQ------RDGILLLE 131 (444)
Q Consensus 89 --------------------------~~~~~~~~~d~~~lp-----~~~~sFDlI~~~~~~l~~~~------d~~~~L~e 131 (444)
..++.+...|....+ +.+++||+|+|.. +++|+. +...+|++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~-vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLS-LTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEES-CHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEECh-HHHHhhhcCCHHHHHHHHHH
Confidence 035778888865443 5678999999988 465543 56689999
Q ss_pred HHhhcCCCeEEEEEcCCCCC------CChhhHHHH-------HHHHHHHHh--cCeEEEeee
Q 013393 132 LDRLLRPGGYFVYSSPEAYA------HDPENRRIW-------NAMYDLLKS--MCWKIVSKK 178 (444)
Q Consensus 132 i~rvLkPGG~lvis~p~~~~------~~~~~~~~~-------~~l~~l~~~--~gf~~v~~~ 178 (444)
++++|||||+|++...++.. ..+.....+ .++.+++.+ .||+.+...
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 99999999999997654321 111111122 267778887 899665543
No 60
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.44 E-value=2e-13 Score=126.89 Aligned_cols=130 Identities=15% Similarity=0.247 Sum_probs=95.9
Q ss_pred CCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCcc--CCCCCCCccEEEecccccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR--LPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~--lp~~~~sFDlI~~~~~~l~~~ 122 (444)
..+|||+|||+|.++..+++.. ..+.+.|+++.+++.++++. ..+...|... .++++++||+|+|+. +++|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~-~l~~~ 106 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGD-VLEHL 106 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEES-CGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECC-hhhhc
Confidence 3489999999999999998762 23444455566667776654 3567777765 667788999999998 57888
Q ss_pred ccHHHHHHHHHhhcCCCeEEEEEcCCCCC-------------CCh------h--hHHHHHHHHHHHHhcCeEEEeeecc
Q 013393 123 QRDGILLLELDRLLRPGGYFVYSSPEAYA-------------HDP------E--NRRIWNAMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 123 ~d~~~~L~ei~rvLkPGG~lvis~p~~~~-------------~~~------~--~~~~~~~l~~l~~~~gf~~v~~~~~ 180 (444)
++...++.++.++|+|||+++++.+.... ... . ....-.++.+++++.||+++.....
T Consensus 107 ~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 107 FDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp SCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 89999999999999999999998765211 000 0 0012357889999999998876553
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.44 E-value=3e-13 Score=124.00 Aligned_cols=128 Identities=15% Similarity=0.167 Sum_probs=90.2
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc-cc
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQ 123 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~-~~ 123 (444)
+|||+|||+|.++..+++. .++++|+++.++..+... ....+.++.+...|...+++++++||+|+|+.+ ++ ..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQL-AQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHH-HHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCCHH
Confidence 7999999999999999875 466666665544333322 222355788888998888888899999999653 33 35
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCCCCC-----Ch---hhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEAYAH-----DP---ENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~~~~-----~~---~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+...+++++.++|||||+++++.+..... .+ .....-.++.++++ ||+++....
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 67799999999999999999987543211 00 11112346777777 998876654
No 62
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=4.1e-13 Score=130.18 Aligned_cols=101 Identities=18% Similarity=0.324 Sum_probs=77.8
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCC-CCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPY-PSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~-~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. .++|+|+++.++..+..+. ...+ .++.+...|...+++ ++++||+|+|..+ +
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~-l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS-F 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC-G
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECch-h
Confidence 38999999999998888763 5778877776554444222 2222 246888889888888 5789999999884 6
Q ss_pred cc----cccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 120 DW----LQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 120 ~~----~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
|+ ..+...+++++.++|||||+++++.+.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 65 466779999999999999999998755
No 63
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=1.1e-12 Score=126.06 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=76.9
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcc------cchHHHHHHHHHcC--CCcEEEEec---CccCCCCCCCc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPN------DVHENQIQFALERG--IPSTLGVLG---TKRLPYPSRSF 109 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~------dis~a~i~~a~e~~--~~~~~~~~d---~~~lp~~~~sF 109 (444)
.+|||||||+|.++..+++ ..++|+|+++. ++..++.+ ....+ .++.+...| ...+|+++++|
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNH-LLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHH-HHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHH-HHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 3899999999999998876 36889999886 55444432 23333 357787777 45667778999
Q ss_pred cEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 110 ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 110 DlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
|+|+|+. +++|.++...+++.+.++++|||++++.+..
T Consensus 124 D~v~~~~-~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 124 DRVVLAH-SLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp SEEEEES-CGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred EEEEEcc-chhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 9999998 4777788888777777888889999997644
No 64
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.43 E-value=1.6e-12 Score=120.76 Aligned_cols=125 Identities=11% Similarity=0.091 Sum_probs=93.1
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC--CCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp--~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. .++|+|+++..+..+..+.......++.+...|...++ +++++||+|+++.. .
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~-~ 121 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS-D 121 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-C
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC-C
Confidence 48999999999999988863 68889888877655554333322247888899988777 77889999999863 4
Q ss_pred cccc--------cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 120 DWLQ--------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 120 ~~~~--------d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+|.. ....++.++.++|||||.+++.+.. ......+.+++++.||+.+....
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--------RGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEEES
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--------HHHHHHHHHHHHHCCCeeeeccc
Confidence 4422 1257999999999999999997543 12345677788888998776543
No 65
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=1.5e-13 Score=133.55 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=79.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc----CCCcEEEEecCccCC---CCCCCccEEEec-
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLP---YPSRSFELAHCS- 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~----~~~~~~~~~d~~~lp---~~~~sFDlI~~~- 115 (444)
.+|||||||+|.++..+++. .|+|+|+++.++..+..+..... ..++.+...|...++ +++++||+|+|.
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g 138 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLG 138 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECT
T ss_pred CEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcC
Confidence 48999999999999999886 56777777665544433221111 134667788887777 788999999998
Q ss_pred ccccccccc-------HHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 116 RCRIDWLQR-------DGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 116 ~~~l~~~~d-------~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
. +++|..+ ...+++++.++|||||+++++.++
T Consensus 139 ~-~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 139 N-SFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp T-CGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred h-HHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 5 5888888 889999999999999999998765
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=7.1e-13 Score=120.62 Aligned_cols=131 Identities=18% Similarity=0.278 Sum_probs=91.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..........++.+...|...+++ +++||+|+|+. ++++.+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~-~l~~~~ 111 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTV-VLMFLE 111 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEES-CGGGSC
T ss_pred CeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcc-hhhhCC
Confidence 38999999999999999875 577887777666555433322222368888999888888 78999999998 477765
Q ss_pred --cHHHHHHHHHhhcCCCeEEEEEcCCC---CCCChhh--HHHHHHHHHHHHhcCeEEEeeecc
Q 013393 124 --RDGILLLELDRLLRPGGYFVYSSPEA---YAHDPEN--RRIWNAMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 124 --d~~~~L~ei~rvLkPGG~lvis~p~~---~~~~~~~--~~~~~~l~~l~~~~gf~~v~~~~~ 180 (444)
+...+++++.++|||||++++..+.. +...... ...-.++.+++++ |+++.....
T Consensus 112 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 112 AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 67899999999999999988754211 1100000 0012356667765 887776554
No 67
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.42 E-value=4.3e-13 Score=131.07 Aligned_cols=99 Identities=12% Similarity=0.188 Sum_probs=79.6
Q ss_pred CCeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHH--cCCCcEEEEecCccCCCCC------CCccE
Q 013393 45 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALE--RGIPSTLGVLGTKRLPYPS------RSFEL 111 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e--~~~~~~~~~~d~~~lp~~~------~sFDl 111 (444)
..+|||||||+|.++..+++ ..|+|+|+++.++..+....... ...++.+.+.|+..+++++ ++||+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 34899999999999999984 25778877776655444332221 1567899999999988777 89999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCeEEEEE
Q 013393 112 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 112 I~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis 145 (444)
|+|+. ++||. +...+++++.++|||||++++.
T Consensus 117 V~~~~-~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 117 ITAVE-CAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEES-CGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeHhh-HHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 99998 58887 9999999999999999999983
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.42 E-value=5.2e-13 Score=131.57 Aligned_cols=101 Identities=11% Similarity=0.117 Sum_probs=73.2
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCC-------cEEEEecC------ccC--CCCCC
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP-------STLGVLGT------KRL--PYPSR 107 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~-------~~~~~~d~------~~l--p~~~~ 107 (444)
.+|||||||+|..+..++.. .|+|+|+|+.++..++.+. .+.+.. +.+.+.+. ..+ +++++
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~-~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY-NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH-HhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 48999999999765555443 5788888887776665433 222322 45666665 333 35678
Q ss_pred CccEEEecccccccc---ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 108 SFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 108 sFDlI~~~~~~l~~~---~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+||+|+|.. ++||. ++...+++++.++|||||+|++++++
T Consensus 129 ~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 129 KFNIIDWQF-AIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999999998 47764 45679999999999999999998775
No 69
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.41 E-value=4.2e-13 Score=128.87 Aligned_cols=126 Identities=11% Similarity=0.026 Sum_probs=86.6
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc----------------------CCCcEEEEecCcc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----------------------GIPSTLGVLGTKR 101 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~----------------------~~~~~~~~~d~~~ 101 (444)
.+|||+|||+|..+..|++. .|+|+|+|+.+ ++.|+++ +.++.+.++|+..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~-----i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGHTVVGVEISEIG-----IREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTCEEEEECSCHHH-----HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHH-----HHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 48999999999999999986 46666555544 4444332 2467899999999
Q ss_pred CCCCC-CCccEEEeccccccccc--cHHHHHHHHHhhcCCCeEEEEEcCCCC---CCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 102 LPYPS-RSFELAHCSRCRIDWLQ--RDGILLLELDRLLRPGGYFVYSSPEAY---AHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 102 lp~~~-~sFDlI~~~~~~l~~~~--d~~~~L~ei~rvLkPGG~lvis~p~~~---~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
+++++ ++||+|++..+ +++++ +...+++++.++|||||++++.+.... ...+...-.-+++.+++.. +|+++
T Consensus 145 l~~~~~~~FD~V~~~~~-l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGA-LVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGGGCCCCEEEEEESSS-TTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred CCcccCCCEEEEEEhhh-hhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 88764 89999998874 55543 345799999999999999975431100 0000000123467778876 58877
Q ss_pred eee
Q 013393 176 SKK 178 (444)
Q Consensus 176 ~~~ 178 (444)
...
T Consensus 223 ~~~ 225 (252)
T 2gb4_A 223 CLE 225 (252)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 70
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.40 E-value=2.9e-13 Score=129.61 Aligned_cols=98 Identities=20% Similarity=0.427 Sum_probs=79.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||||||+|.++..+++. .++++| +++.+++.++++... .+...|...+++++++||+|+|...+.|+.+
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD-----~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGFEVVLVD-----PSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTCEEEEEE-----SCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CeEEEeCCCcCHHHHHHHHcCCeEEEEe-----CCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 48999999999999999886 355554 555666666666443 2778888889988899999999876677767
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
+...+++++.++|||||+++++.++.
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 88999999999999999999987653
No 71
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.40 E-value=3.6e-13 Score=129.59 Aligned_cols=133 Identities=13% Similarity=0.095 Sum_probs=87.9
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc-----------------------------CCCcE
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-----------------------------GIPST 93 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~-----------------------------~~~~~ 93 (444)
.+|||||||+|.++..++.. .|+|+|+++.++..+......+. ..++.
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 136 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVK 136 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEE
T ss_pred ceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhh
Confidence 48999999999887766553 47888888776655442211100 00122
Q ss_pred -EEEecCcc-CCCC---CCCccEEEecccccccc----ccHHHHHHHHHhhcCCCeEEEEEcCCCCC-C--Chh----hH
Q 013393 94 -LGVLGTKR-LPYP---SRSFELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPEAYA-H--DPE----NR 157 (444)
Q Consensus 94 -~~~~d~~~-lp~~---~~sFDlI~~~~~~l~~~----~d~~~~L~ei~rvLkPGG~lvis~p~~~~-~--~~~----~~ 157 (444)
+...|... .|++ .++||+|+|+.+ +|++ ++...++++++++|||||+|++++..... + ... ..
T Consensus 137 ~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~ 215 (263)
T 2a14_A 137 RVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVA 215 (263)
T ss_dssp EEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCC
T ss_pred eEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccc
Confidence 67778766 3432 578999999995 6653 45578999999999999999998632110 0 000 00
Q ss_pred HHHHHHHHHHHhcCeEEEeeec
Q 013393 158 RIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 158 ~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
-.-.++.+++++.||+++....
T Consensus 216 ~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 216 LEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCHHHHHHHHHHCCCEEEEEee
Confidence 0234788999999998876654
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.40 E-value=1.2e-11 Score=113.72 Aligned_cols=117 Identities=14% Similarity=0.024 Sum_probs=87.3
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .++++|+++..+..++.+.......++.+...|........++||+|++... .+
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~~- 119 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-GG- 119 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-TT-
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-Cc-
Confidence 38999999999999998874 4788888877665555433332234578888887554433467999998873 33
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEE
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 174 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~ 174 (444)
+...+++++.++|||||++++..+. ......+.+.+++.||..
T Consensus 120 --~~~~~l~~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 120 --MLEEIIDAVDRRLKSEGVIVLNAVT--------LDTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp --CHHHHHHHHHHHCCTTCEEEEEECB--------HHHHHHHHHHHHHTTCEE
T ss_pred --CHHHHHHHHHHhcCCCeEEEEEecc--------cccHHHHHHHHHHCCCce
Confidence 7789999999999999999997554 234567888899999943
No 73
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.39 E-value=1.1e-12 Score=120.77 Aligned_cols=144 Identities=16% Similarity=0.125 Sum_probs=97.0
Q ss_pred CccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC
Q 013393 14 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI 90 (444)
Q Consensus 14 gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~ 90 (444)
+..|..+.....+.+.+.+.. .++++ .+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+.
T Consensus 36 ~~~f~~~~~~~~~~~~~~l~~---~~~~~---~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~ 108 (205)
T 3grz_A 36 GLAFGTGNHQTTQLAMLGIER---AMVKP---LTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENA-ALNGI 108 (205)
T ss_dssp C-----CCHHHHHHHHHHHHH---HCSSC---CEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTC
T ss_pred CcccCCCCCccHHHHHHHHHH---hccCC---CEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCC
Confidence 344555555555555555542 12233 38999999999999998874 5778888776655544333 22343
Q ss_pred -CcEEEEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHh
Q 013393 91 -PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS 169 (444)
Q Consensus 91 -~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~ 169 (444)
++.+...|.... .+++||+|+|+. .+++ ...+++++.++|||||++++++... .....+.+++++
T Consensus 109 ~~v~~~~~d~~~~--~~~~fD~i~~~~-~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~ 174 (205)
T 3grz_A 109 YDIALQKTSLLAD--VDGKFDLIVANI-LAEI---LLDLIPQLDSHLNEDGQVIFSGIDY--------LQLPKIEQALAE 174 (205)
T ss_dssp CCCEEEESSTTTT--CCSCEEEEEEES-CHHH---HHHHGGGSGGGEEEEEEEEEEEEEG--------GGHHHHHHHHHH
T ss_pred CceEEEecccccc--CCCCceEEEECC-cHHH---HHHHHHHHHHhcCCCCEEEEEecCc--------ccHHHHHHHHHH
Confidence 378888887553 458999999987 3443 4789999999999999999965432 135578889999
Q ss_pred cCeEEEeee
Q 013393 170 MCWKIVSKK 178 (444)
Q Consensus 170 ~gf~~v~~~ 178 (444)
.||+.+...
T Consensus 175 ~Gf~~~~~~ 183 (205)
T 3grz_A 175 NSFQIDLKM 183 (205)
T ss_dssp TTEEEEEEE
T ss_pred cCCceEEee
Confidence 999887654
No 74
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.39 E-value=2.2e-12 Score=120.32 Aligned_cols=122 Identities=11% Similarity=0.167 Sum_probs=88.8
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCC--CCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp--~~~~sFDlI~~~~~~ 118 (444)
.+|||||||+|.++..+++. .++|+|+++.++..+..+. .+.+ .++.+...|+..++ +++++||.|++...
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~-~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKV-KDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH-HHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHH-HHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 48999999999999998863 5788888776665554333 3334 46888888887766 77889999998653
Q ss_pred cccccc--------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 119 IDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 119 l~~~~d--------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
.+|... ...++.++.++|||||.|++.+.. ......+.+.+++.||+....
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--------~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--------RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCccccc
Confidence 344221 357999999999999999997543 123456667777788876554
No 75
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.39 E-value=8.7e-13 Score=121.27 Aligned_cols=101 Identities=16% Similarity=0.246 Sum_probs=78.7
Q ss_pred CeEEEECCCcchHH-HHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 46 RNVLDVGCGVASFG-AYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a-~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
.+|||+|||+|.++ ..+++. .++++|+++.++..+... +...+.++.+...|...+++++++||+|+|+. +++|.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 102 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENF-SRENNFKLNISKGDIRKLPFKDESMSFVYSYG-TIFHM 102 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHH-HHHHTCCCCEEECCTTSCCSCTTCEEEEEECS-CGGGS
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEECchhhCCCCCCceeEEEEcC-hHHhC
Confidence 38999999999874 444443 578888877666554432 33345678888999999998889999999987 46776
Q ss_pred --ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 123 --QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 123 --~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++...+++++.++|||||+++++.+.
T Consensus 103 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 103 RKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 67789999999999999999997643
No 76
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.38 E-value=6.6e-13 Score=135.01 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=80.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc--
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW-- 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~-- 121 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+.. .+...+.++.+...|....+.++++||+|+|+. .+|+
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~-n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~np-p~~~~~ 312 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQK-GLEANALKAQALHSDVDEALTEEARFDIIVTNP-PFHVGG 312 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHH-HHHHTTCCCEEEECSTTTTSCTTCCEEEEEECC-CCCTTC
T ss_pred CEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCeEEEEcchhhccccCCCeEEEEECC-chhhcc
Confidence 48999999999999999885 56777777665544443 233346678899999888877678999999987 4665
Q ss_pred ---cccHHHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 122 ---LQRDGILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 122 ---~~d~~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
..+...++.++.++|||||+++++.....
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 45567899999999999999999876654
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.38 E-value=5.7e-12 Score=113.62 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=90.5
Q ss_pred cCCeeec-CCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHH
Q 013393 4 NGEKINF-PGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHEN 80 (444)
Q Consensus 4 ~g~~~~f-pg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a 80 (444)
.|..+.| ++.+.......+...+.+.+.+.. . ...+|||+|||+|.++..+++. .++++|+++..+..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~---~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVV-----D---KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLA 90 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC-----C---TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHccc-----C---CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 3445555 333333333233445556666643 1 2348999999999999999874 577887777665544
Q ss_pred HHHHHHHcCC-C--cEEEEecCccCCCCCCCccEEEeccccccc-cccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 81 QIQFALERGI-P--STLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 81 ~i~~a~e~~~-~--~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~-~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
..... ..+. + +.+...|... +.++++||+|+++. .+++ ..+...+++++.++|+|||++++..+.
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 91 KENIK-LNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp HHHHH-HTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred HHHHH-HcCCCccceEEEECchhc-ccccCCceEEEECC-CcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 43332 2233 3 7888888766 34467899999987 4555 356679999999999999999998765
No 78
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.37 E-value=2e-12 Score=117.75 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=94.3
Q ss_pred ccCCeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchH
Q 013393 3 VNGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHE 79 (444)
Q Consensus 3 ~~g~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~ 79 (444)
+.|..+..|+. .+....+...+.+.+.+.... . ....+|||+|||+|.++..+++. .|+++|+++.++..
T Consensus 10 ~~g~~l~~~~~--~~rp~~~~~~~~l~~~l~~~~-~----~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~ 82 (189)
T 3p9n_A 10 AGGRRIAVPPR--GTRPTTDRVRESLFNIVTARR-D----LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAV 82 (189)
T ss_dssp TTTCEEECCSC--CC---CHHHHHHHHHHHHHHS-C----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHH
T ss_pred cCCcEecCCCC--CCccCcHHHHHHHHHHHHhcc-C----CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHH
Confidence 35667777772 344444555555555554210 0 12348999999999999977764 48889888877665
Q ss_pred HHHHHHHHcCCCcEEEEecCccCC--CCCCCccEEEecccccccc-ccHHHHHHHHHh--hcCCCeEEEEEcCC
Q 013393 80 NQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHCSRCRIDWL-QRDGILLLELDR--LLRPGGYFVYSSPE 148 (444)
Q Consensus 80 a~i~~a~e~~~~~~~~~~d~~~lp--~~~~sFDlI~~~~~~l~~~-~d~~~~L~ei~r--vLkPGG~lvis~p~ 148 (444)
++.+.......++.+...|...++ +++++||+|+++.. .++. ++...++.++.+ +|+|||++++..+.
T Consensus 83 a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 83 IARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 554433332246888888877653 44689999999873 5543 677899999999 99999999997654
No 79
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=5.4e-13 Score=125.91 Aligned_cols=112 Identities=19% Similarity=0.174 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc----CCCcE
Q 013393 21 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER----GIPST 93 (444)
Q Consensus 21 ~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~----~~~~~ 93 (444)
...+.+.+.+.+. .++ .+|||||||+|.++..+++. .++++|+++ .+++.|+++ +.++.
T Consensus 46 ~~~~~~~l~~~~~------~~~---~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~v~ 111 (236)
T 1zx0_A 46 ETPYMHALAAAAS------SKG---GRVLEVGFGMAIAASKVQEAPIDEHWIIECND-----GVFQRLRDWAPRQTHKVI 111 (236)
T ss_dssp GHHHHHHHHHHHT------TTC---EEEEEECCTTSHHHHHHHTSCEEEEEEEECCH-----HHHHHHHHHGGGCSSEEE
T ss_pred HHHHHHHHHhhcC------CCC---CeEEEEeccCCHHHHHHHhcCCCeEEEEcCCH-----HHHHHHHHHHHhcCCCeE
Confidence 3455555555442 122 38999999999999999874 456665555 444555443 45678
Q ss_pred EEEecCccC--CCCCCCccEEEe-cccc-cc--ccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 94 LGVLGTKRL--PYPSRSFELAHC-SRCR-ID--WLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 94 ~~~~d~~~l--p~~~~sFDlI~~-~~~~-l~--~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+...|...+ ++++++||+|+| .... .+ +..+...+++++.|+|||||+|++..
T Consensus 112 ~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 112 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 888888887 888899999999 4421 11 12334578999999999999999854
No 80
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=118.69 Aligned_cols=96 Identities=21% Similarity=0.363 Sum_probs=76.2
Q ss_pred eEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+|||+|||+|.++..+++. .++++|+++.. ++.++++. .++.+...|...+++++++||+|+++.+ ++
T Consensus 45 ~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~-----~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 118 (215)
T 2pxx_A 45 RILVLGCGNSALSYELFLGGFPNVTSVDYSSVV-----VAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGT-LD 118 (215)
T ss_dssp CEEEETCTTCSHHHHHHHTTCCCEEEEESCHHH-----HHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESH-HH
T ss_pred eEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHH-----HHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcc-hh
Confidence 7999999999999999875 56777666544 44444442 4678889998888888899999999774 43
Q ss_pred cc---------------ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 121 WL---------------QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 121 ~~---------------~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+. .+...+++++.++|||||++++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 32 35578999999999999999998765
No 81
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.36 E-value=1.4e-12 Score=119.23 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=74.9
Q ss_pred eEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCC-CCCCCccEEEecccc
Q 013393 47 NVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLP-YPSRSFELAHCSRCR 118 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp-~~~~sFDlI~~~~~~ 118 (444)
+|||+|||+|.++..+++. .++++|+++.++..+.... ...+ .++.+...|...++ +.+++||+|+++...
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKL-TDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHH-HHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 8999999999999988774 6788887776665544332 3333 36788888887775 566899999987643
Q ss_pred ccc--------cccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 119 IDW--------LQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 119 l~~--------~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+.. ..+...+++++.++|||||++++....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 221 123457999999999999999997644
No 82
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.35 E-value=3.1e-13 Score=131.48 Aligned_cols=133 Identities=15% Similarity=0.148 Sum_probs=86.0
Q ss_pred CeEEEECCCcchHHHHHhh---CCceEEEcCcccchHHHHHHHH----------------HcCC--------------Cc
Q 013393 46 RNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFAL----------------ERGI--------------PS 92 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~---~~V~gvdis~~dis~a~i~~a~----------------e~~~--------------~~ 92 (444)
.+|||||||+|.++..++. ..|+|+|+++.++..+...... ..+. ..
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 152 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVK 152 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEE
T ss_pred CeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhc
Confidence 4899999999996554443 3577887776655443321100 0110 13
Q ss_pred EEEEecCcc-CCC-----CCCCccEEEeccccccc----cccHHHHHHHHHhhcCCCeEEEEEcCC---CCCCChh----
Q 013393 93 TLGVLGTKR-LPY-----PSRSFELAHCSRCRIDW----LQRDGILLLELDRLLRPGGYFVYSSPE---AYAHDPE---- 155 (444)
Q Consensus 93 ~~~~~d~~~-lp~-----~~~sFDlI~~~~~~l~~----~~d~~~~L~ei~rvLkPGG~lvis~p~---~~~~~~~---- 155 (444)
.+..+|+.. +|+ ++++||+|+|+. ++++ .++...+|+++.++|||||+|+++... .+.....
T Consensus 153 ~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~ 231 (289)
T 2g72_A 153 RVLPIDVHQPQPLGAGSPAPLPADALVSAF-CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTV 231 (289)
T ss_dssp EEECCCTTSSSTTCSSCSSCSSEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEEC
T ss_pred eEEecccCCCCCccccccCCCCCCEEEehh-hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeee
Confidence 455667766 654 356799999998 4777 567889999999999999999986411 1100000
Q ss_pred hHHHHHHHHHHHHhcCeEEEeeec
Q 013393 156 NRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 156 ~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
....-.++.+++++.||+++....
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEEeeE
Confidence 001234788899999998876643
No 83
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.35 E-value=4.1e-12 Score=119.33 Aligned_cols=101 Identities=19% Similarity=0.325 Sum_probs=78.4
Q ss_pred CeEEEECCCcchHHHHHhhC-CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc--
Q 013393 46 RNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~-- 122 (444)
.+|||+|||+|.++..+++. .++++|+++.++..+..+ +...+.++.+...|...++++ ++||+|+|....++|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEK-AMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQT 112 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCS
T ss_pred CeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHh-hhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCC
Confidence 48999999999999999875 577777776655444432 223356788889998888876 7899999975346766
Q ss_pred -ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 123 -QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 123 -~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.+...+++++.++|||||++++..+.
T Consensus 113 ~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 113 EADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 45568999999999999999997654
No 84
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=2.3e-11 Score=112.61 Aligned_cols=118 Identities=13% Similarity=-0.008 Sum_probs=86.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+ ++..+. ++.+...|.........+||+|++... +
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~-~-- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKN-IDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG-G-- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-C--
T ss_pred CEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-c--
Confidence 38999999999999999875 577887777655444432 333343 578888887773223357999998763 2
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+.. +++++.++|||||+++++... .....++.+.+++.|+++....
T Consensus 133 --~~~-~l~~~~~~LkpgG~lv~~~~~--------~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 133 --SQA-LYDRLWEWLAPGTRIVANAVT--------LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp --CHH-HHHHHHHHSCTTCEEEEEECS--------HHHHHHHHHHHHHHCSEEEEEE
T ss_pred --cHH-HHHHHHHhcCCCcEEEEEecC--------cccHHHHHHHHHhCCCcEEEEE
Confidence 455 999999999999999997654 2345677788888888776553
No 85
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.35 E-value=5.4e-13 Score=125.17 Aligned_cols=114 Identities=20% Similarity=0.304 Sum_probs=87.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecC-ccCCCC-CCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYP-SRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~-~~lp~~-~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .|+++| +++.+++.++++..++.+...|. ..+|++ +++||+|+|+
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD-----~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAYD-----FSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEEE-----SCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEEE-----CCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 48999999999999999885 455554 45566677777777889999998 678888 8999999986
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeeecc
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~~~ 180 (444)
.+...+++++.++|||||+++...... ....+.+.+++.||+.......
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRL---------NVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSS---------CCTHHHHHHHHTTCEEEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcC---------CHHHHHHHHHHCCCeEEEEEee
Confidence 355678999999999999999321111 1235778889999988766543
No 86
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.34 E-value=9.1e-13 Score=125.48 Aligned_cols=129 Identities=16% Similarity=0.181 Sum_probs=89.2
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc--CCC----------------------------
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER--GIP---------------------------- 91 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~--~~~---------------------------- 91 (444)
..+|||+|||+|.++..+++. .|+++|+++.++ +.++++ ..+
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNL-----WELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHH-----HHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHH-----HHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 348999999999999888764 456666665544 444332 111
Q ss_pred ----c-EEEEecCccCC-CCC---CCccEEEecccccc----ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChh---
Q 013393 92 ----S-TLGVLGTKRLP-YPS---RSFELAHCSRCRID----WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE--- 155 (444)
Q Consensus 92 ----~-~~~~~d~~~lp-~~~---~sFDlI~~~~~~l~----~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~--- 155 (444)
+ .+...|....+ +++ ++||+|+|+.+ ++ +.++...+++++.++|||||+|+++..........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC-LDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhh-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 5 77888877654 355 89999999984 66 45577899999999999999999976331100000
Q ss_pred --h--HHHHHHHHHHHHhcCeEEEeeec
Q 013393 156 --N--RRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 156 --~--~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
. .-.-..+.+++++.||+++....
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 0 00123788899999999887654
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.34 E-value=5.2e-12 Score=119.59 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=89.3
Q ss_pred CeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCC---CCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYP---SRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~---~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..++. ..|+++|+++.++..+.... ...+. ++.+...|+..++++ +++||+|+|..
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 149 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLS-EALQLENTTFCHDRAETFGQRKDVRESYDIVTARA- 149 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC-
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCEEEEeccHHHhcccccccCCccEEEEec-
Confidence 4899999999999988884 35788888876665554333 33343 688888888877754 57899999865
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
..+...+++++.++|||||++++...... ......+.+.++..||+.....
T Consensus 150 ----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~------~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 150 ----VARLSVLSELCLPLVKKNGLFVALKAASA------EEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp ----CSCHHHHHHHHGGGEEEEEEEEEEECC-C------HHHHHHHHHHHHHTTEEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc------hHHHHHHHHHHHHcCCeEeEEE
Confidence 26778999999999999999998643211 1234567778889999876543
No 88
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=2.6e-11 Score=108.31 Aligned_cols=138 Identities=11% Similarity=0.047 Sum_probs=98.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC-CCcEEEEec
Q 013393 22 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLG 98 (444)
Q Consensus 22 ~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d 98 (444)
....+.+.+.+.. .+ ..+|||+|||+|.++..+++. .++++|+++..+..+..+. ...+ .++.+...|
T Consensus 21 ~~~~~~~~~~~~~-----~~---~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~d 91 (183)
T 2yxd_A 21 EEIRAVSIGKLNL-----NK---DDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNL-AKFNIKNCQIIKGR 91 (183)
T ss_dssp HHHHHHHHHHHCC-----CT---TCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHH-HHTTCCSEEEEESC
T ss_pred HHHHHHHHHHcCC-----CC---CCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH-HHcCCCcEEEEECC
Confidence 4455555556543 22 238999999999999999873 5778887776655444332 2233 367888888
Q ss_pred CccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 99 TKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 99 ~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
... ++++++||+|+|+.+ .+...+++++.++ |||.+++..+.. ....++.+.+++.||++....
T Consensus 92 ~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 92 AED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL--------ENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp HHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred ccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc--------ccHHHHHHHHHHcCCeEEEEE
Confidence 766 666678999999874 5678899999999 999999986542 335678888999999877665
Q ss_pred cceeEe
Q 013393 179 DQTVIW 184 (444)
Q Consensus 179 ~~~~~w 184 (444)
.....+
T Consensus 156 ~~~~~~ 161 (183)
T 2yxd_A 156 VFISYA 161 (183)
T ss_dssp EEEEEE
T ss_pred eeeehh
Confidence 444443
No 89
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.33 E-value=6.3e-12 Score=119.16 Aligned_cols=101 Identities=20% Similarity=0.325 Sum_probs=78.0
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc-
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL- 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~- 122 (444)
.+|||+|||+|.++..+++. .++|+|+++.++..+..+ +...+.++.+...|...++++ ++||+|+|..+.+++.
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 120 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRK-AKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFD 120 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSC
T ss_pred CEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCC
Confidence 48999999999999999875 577777777665444432 233456788999998888875 6899999875445543
Q ss_pred -ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 123 -QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 123 -~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++...+++++.++|||||.+++..+.
T Consensus 121 ~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 121 EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 35568999999999999999987654
No 90
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.32 E-value=1.1e-12 Score=125.93 Aligned_cols=123 Identities=11% Similarity=0.134 Sum_probs=86.5
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCC--CCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP--YPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp--~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..++++ .|+++|+++..+..++.+.. ..+. ++.+...|...++ +++++||+|+|+...
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~-~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVA-YNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHH-HTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHH-HCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 48999999999999999875 56777776655544443332 2333 4788888887765 557899999997421
Q ss_pred ccc----c---------------ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 119 IDW----L---------------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 119 l~~----~---------------~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
... . .+...++.++.++|||||++++..+.. ...++...+++.+|......
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE---------RLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT---------THHHHHHHHHHTTEEEEEEE
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH---------HHHHHHHHHHHCCCceEEEE
Confidence 111 0 234579999999999999999965431 24467778888899876543
No 91
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=4.2e-12 Score=118.36 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=81.1
Q ss_pred CeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC----CCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL----PYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l----p~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++ ..|+|+|+++.++.. +++.++++ .++.+...|.... +++ ++||+|+|+.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~-~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEK-LLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHH-HHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHH-HHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec-
Confidence 3899999999999998876 358888888765532 33455544 4667777776552 444 7899999873
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcCCC---CCCChhhHHHH-HHHHHHHHhcCeEEEeeec
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPENRRIW-NAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~---~~~~~~~~~~~-~~l~~l~~~~gf~~v~~~~ 179 (444)
.+ ..+...+++++.++|||||+|+++.+.. ....+ ...+ .++.. +++. |+++....
T Consensus 135 -~~-~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~--~~~~~~~~~~-l~~~-f~~~~~~~ 194 (210)
T 1nt2_A 135 -AQ-KNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEP--EEVFKSVLKE-MEGD-FKIVKHGS 194 (210)
T ss_dssp -CS-TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCH--HHHHHHHHHH-HHTT-SEEEEEEE
T ss_pred -cC-hhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCH--HHHHHHHHHH-HHhh-cEEeeeec
Confidence 22 2334456999999999999999974221 11111 1222 22233 5666 88776643
No 92
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.32 E-value=4.2e-12 Score=117.96 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=92.0
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH----cC-CCcEEEEecCccCCCCCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RG-IPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e----~~-~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .|+|+|+++.++.... +.|++ .+ .++.+...|...+|+++++ |.|+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 38999999999999999874 6899999988775433 22222 23 3688999999999988776 7777432
Q ss_pred --ccc--cccccHHHHHHHHHhhcCCCeEEEEEcCCC--CCCCh-------hhHH-HHHHHHHHHHhcCeEEEeeec
Q 013393 117 --CRI--DWLQRDGILLLELDRLLRPGGYFVYSSPEA--YAHDP-------ENRR-IWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 117 --~~l--~~~~d~~~~L~ei~rvLkPGG~lvis~p~~--~~~~~-------~~~~-~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+.. ++.++...+++++.++|||||.++++.... ....+ .... .-..+..++++.||++.....
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 112 255667899999999999999999964221 10000 0111 223488899999998876643
No 93
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.32 E-value=1.8e-11 Score=109.42 Aligned_cols=117 Identities=14% Similarity=0.120 Sum_probs=79.2
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecC-ccCCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~-~~lp~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+ +.+.+. ++ +...|. ..++..+++||+|+++..
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~- 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSN-AINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGG- 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHH-HHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC--
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-HHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCc-
Confidence 38999999999999999875 356666655444333321 222233 35 555664 334433378999999884
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
+++ ..+++++.++|||||++++..... .....+..++++.++++...
T Consensus 104 ~~~----~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 104 LTA----PGVFAAAWKRLPVGGRLVANAVTV--------ESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TTC----TTHHHHHHHTCCTTCEEEEEECSH--------HHHHHHHHHHHHHCCEEEEE
T ss_pred ccH----HHHHHHHHHhcCCCCEEEEEeecc--------ccHHHHHHHHHHcCCeeEEE
Confidence 554 679999999999999999976542 23456677788888766543
No 94
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.32 E-value=1e-11 Score=116.20 Aligned_cols=123 Identities=13% Similarity=0.075 Sum_probs=89.0
Q ss_pred CeEEEECCC-cchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC-CCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCG-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCG-tG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l-p~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+||| +|.++..+++. .|+++|+++.++..+.. .+...+.++.+...|...+ ++++++||+|+|+.. .+
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp-~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARR-NIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP-YY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC-CC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC-Cc
Confidence 489999999 99999988764 67888888766655543 3334455888888886433 456789999999853 22
Q ss_pred ccc-------------------cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 121 WLQ-------------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 121 ~~~-------------------d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
+.. ....+++++.++|||||++++..+.. ......+.+++++.||++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-------EKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-------HhHHHHHHHHHHHcCCceEEE
Confidence 211 13689999999999999999975542 133567888899999976554
No 95
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.30 E-value=6e-12 Score=121.91 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=77.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+.. .+...+.++.+...|...+++ +++||+|+|+. +++|..
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~-~~~~~~ 198 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNE-TKEKENLNISTALYDINAANI-QENYDFIVSTV-VFMFLN 198 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCEEEEECCGGGCCC-CSCEEEEEECS-SGGGSC
T ss_pred CcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHHcCCceEEEEeccccccc-cCCccEEEEcc-chhhCC
Confidence 38999999999999999886 56777777766544443 233345588999999888877 68999999998 577764
Q ss_pred --cHHHHHHHHHhhcCCCeEEEEEc
Q 013393 124 --RDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 124 --d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+...+++++.++|||||++++..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 34599999999999999988754
No 96
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.30 E-value=3.1e-12 Score=125.83 Aligned_cols=102 Identities=19% Similarity=0.343 Sum_probs=78.5
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHH-------cCCCcEEEEecCccCC----CC--CCCc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE-------RGIPSTLGVLGTKRLP----YP--SRSF 109 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e-------~~~~~~~~~~d~~~lp----~~--~~sF 109 (444)
.+|||+|||+|.++..+++. .++++|+++.++..+..+.... ...++.+.+.|...++ ++ +++|
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~f 115 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCF 115 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCE
T ss_pred CEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCE
Confidence 48999999999999988864 5788888776665554433322 1235788889988775 53 4589
Q ss_pred cEEEecccccccc----ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 110 ELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 110 DlI~~~~~~l~~~----~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
|+|+|+. ++||. ++...++.++.++|||||+++++.+.
T Consensus 116 D~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 116 DICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp EEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 9999998 58886 34468999999999999999998765
No 97
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.29 E-value=3.4e-11 Score=119.43 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=90.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
..+|||||||+|.++..++++ .++++|+ +..+..+.... .+.+ .++.+...|.. .++|. +||+|+|+.+
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v- 244 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRF-LDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV- 244 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC-
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhh-hhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh-
Confidence 458999999999999999873 4667777 55444443222 2223 46888888876 45655 8999999994
Q ss_pred ccccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCCChh---hH----------HHHHHHHHHHHhcCeEEEeee
Q 013393 119 IDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPE---NR----------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 119 l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~~~---~~----------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+|+.++. ..+++++.++|||||++++.++......+. +. ....++.++++++||+.+...
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 6665665 689999999999999999976543211110 00 112478899999999887654
No 98
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.29 E-value=4.1e-11 Score=120.98 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=91.0
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc-CCCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
..+|||||||+|.++..++++ .++++|+ +..+..+........ ..++.+...|+. .++|. +||+|+|+.+ +
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v-l 278 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV-L 278 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC-G
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh-h
Confidence 358999999999999999874 4677777 554444433222211 246888888876 56665 8999999995 6
Q ss_pred cccccHH--HHHHHHHhhcCCCeEEEEEcCCCCCC-Chh--h--H----------HHHHHHHHHHHhcCeEEEeee
Q 013393 120 DWLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPE--N--R----------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 120 ~~~~d~~--~~L~ei~rvLkPGG~lvis~p~~~~~-~~~--~--~----------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
|+.++.. ++|+++.++|||||++++.++..... .+. . . ....++.++++++||+.+...
T Consensus 279 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 6656665 79999999999999999976432211 111 0 0 112478889999999887664
No 99
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.29 E-value=9.4e-12 Score=117.11 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=86.1
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCcc---CCCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~---lp~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++. .|+++|+++.++.. +++.|+.+ .++.+...|... +++++++||+|+|...
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~-~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRD-LINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHH-HHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHH-HHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 38999999999999988763 57888888765433 33555554 678888888766 4555789999998653
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcCCCC-CCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~-~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
.......++.++.++|||||+++++..... .........+..-.+++++.||+++..
T Consensus 157 ---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 157 ---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQ 214 (233)
T ss_dssp ---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEE
T ss_pred ---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEE
Confidence 222334568899999999999999654310 000111112222257788999988764
No 100
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.28 E-value=1e-11 Score=125.13 Aligned_cols=131 Identities=9% Similarity=0.101 Sum_probs=89.9
Q ss_pred CCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccC--CCCCCCccEEEec
Q 013393 44 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL--PYPSRSFELAHCS 115 (444)
Q Consensus 44 ~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~l--p~~~~sFDlI~~~ 115 (444)
..++|||||||+|.++..++++ .++++|+ +..+..+.. .+.+.+ .++.+...|+... |+| ++||+|+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRK-QTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHH-HHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHH-HHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 3458999999999999999873 4677776 544333321 222223 3578888887765 566 789999999
Q ss_pred cccccccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCCChhh---------------------HHHHHHHHHHHHhcCe
Q 013393 116 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPEN---------------------RRIWNAMYDLLKSMCW 172 (444)
Q Consensus 116 ~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~---------------------~~~~~~l~~l~~~~gf 172 (444)
.+ +|+.++. ..+|+++.++|||||++++.++......... .....++.++++++||
T Consensus 256 ~v-lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 256 QF-LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp SC-STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred ch-hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 84 6654544 4789999999999999999765432211111 0023477888999999
Q ss_pred EEEeee
Q 013393 173 KIVSKK 178 (444)
Q Consensus 173 ~~v~~~ 178 (444)
+.+...
T Consensus 335 ~~v~~~ 340 (363)
T 3dp7_A 335 EVEEIQ 340 (363)
T ss_dssp EESCCC
T ss_pred eEEEEE
Confidence 887654
No 101
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=1.1e-11 Score=111.36 Aligned_cols=113 Identities=12% Similarity=-0.011 Sum_probs=84.3
Q ss_pred eEEEECCCcchHHHHHhhC-CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccccc-
Q 013393 47 NVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR- 124 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d- 124 (444)
+|||+|||+|.++..+++. .++|+|+++ .+++. ..++.+...|... ++++++||+|+|+.. +++..+
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~~v~gvD~s~-----~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~~~~ 94 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRNTVVSTDLNI-----RALES----HRGGNLVRADLLC-SINQESVDVVVFNPP-YVPDTDD 94 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTSEEEEEESCH-----HHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTTCCC
T ss_pred eEEEeccCccHHHHHHHhcCcEEEEECCH-----HHHhc----ccCCeEEECChhh-hcccCCCCEEEECCC-CccCCcc
Confidence 8999999999999999886 455565554 44443 4567888888766 666689999999874 544333
Q ss_pred --------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 125 --------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 125 --------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
...++.++.+.| |||++++..+.. ....++.+++++.||+......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEe
Confidence 357899999999 999999976432 2345788889999998765543
No 102
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.28 E-value=2e-11 Score=119.42 Aligned_cols=115 Identities=9% Similarity=0.114 Sum_probs=80.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHH-Hhh---CCceEEEcCcccchHHHHHHHHHcCCCcEEEEec
Q 013393 23 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAY-LLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 98 (444)
Q Consensus 23 ~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~-La~---~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d 98 (444)
.|...+...+.+ ..++++. +|||||||+|.++.. +++ ..|+|+|+++.++..++...++..-.++.+..+|
T Consensus 106 ~~~~l~~~E~~l--a~l~~g~---rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD 180 (298)
T 3fpf_A 106 RYLELLKNEAAL--GRFRRGE---RAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD 180 (298)
T ss_dssp HHHHHHHHHHHH--TTCCTTC---EEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC
T ss_pred cHHHHHHHHHHH--cCCCCcC---EEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc
Confidence 354444433321 2455555 999999999976644 343 3678888877766555543333222467888888
Q ss_pred CccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 99 TKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 99 ~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
...+| +++||+|++... .++..++++++.|+|||||++++....
T Consensus 181 a~~l~--d~~FDvV~~~a~----~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 181 ETVID--GLEFDVLMVAAL----AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp GGGGG--GCCCSEEEECTT----CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred hhhCC--CCCcCEEEECCC----ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 88775 689999998652 478889999999999999999997543
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.27 E-value=6.2e-12 Score=119.22 Aligned_cols=133 Identities=11% Similarity=0.130 Sum_probs=90.3
Q ss_pred CCCCCCCCCeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCc---cCCCCCCCc
Q 013393 38 KLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK---RLPYPSRSF 109 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~---~lp~~~~sF 109 (444)
.++||. +|||+|||+|.++.++++. .|+++|+++.++..+. +.+.+ ..++.....|.. ..++..+++
T Consensus 74 ~ikpG~---~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~-~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 74 PVKEGD---RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRD-RRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCCTTC---EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTT-CTTEEEEESCTTCGGGGTTTCCCE
T ss_pred CCCCCC---EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHh-hcCeeEEEEeccCccccccccceE
Confidence 566776 9999999999999999872 5889988887664443 22222 235666666643 345667899
Q ss_pred cEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCC-ChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 110 ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH-DPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 110 DlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~-~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
|+|++. +++..+...++.++.++|||||+++++....... .......+.+..+.+++.||+.++..
T Consensus 149 DvVf~d---~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 149 DGLYAD---VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVV 215 (233)
T ss_dssp EEEEEC---CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEe---ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEE
Confidence 999875 3444677789999999999999999864221000 00001234455667788999887654
No 104
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.27 E-value=4e-12 Score=119.27 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=85.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccC-C--CCCCCccEEEecc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRL-P--YPSRSFELAHCSR 116 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~l-p--~~~~sFDlI~~~~ 116 (444)
..+|||||||+|.++..+++. .|+|+|+++.++..+..+ +.+.+ .++.+...|+..+ + +++++||.|++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~-~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLAS-AHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHH-HHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 348999999999999999863 488998888777655543 33334 4688888887663 3 6789999999876
Q ss_pred ccccccccH--------HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHh-cCeEEEe
Q 013393 117 CRIDWLQRD--------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIVS 176 (444)
Q Consensus 117 ~~l~~~~d~--------~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~-~gf~~v~ 176 (444)
. .+|.... ..++.++.++|||||+|++++... .....+.+.+.. .+|+.+.
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~--------~~~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE--------PYAEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEECC
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHhCCCccccc
Confidence 3 4443222 259999999999999999976541 223344444443 4565543
No 105
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.27 E-value=2.9e-12 Score=120.76 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=81.1
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCccc-chHHH--HHHHHHcC-CCcEEEEecCccCCCC-CCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPND-VHENQ--IQFALERG-IPSTLGVLGTKRLPYP-SRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~d-is~a~--i~~a~e~~-~~~~~~~~d~~~lp~~-~~sFDlI~~~~ 116 (444)
.+|||||||+|.++..++++ .|+|+|+++.. +..+. .+.+.+.+ .++.+...|...+|.. ...+|.|+++.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~ 105 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILF 105 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEES
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeC
Confidence 38999999999999999842 57888888433 32221 11112223 3578888888888632 13455555433
Q ss_pred cc----ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCC---------hhhHHHH-H--HHHHHHHhcCeEEEeeecc
Q 013393 117 CR----IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD---------PENRRIW-N--AMYDLLKSMCWKIVSKKDQ 180 (444)
Q Consensus 117 ~~----l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~---------~~~~~~~-~--~l~~l~~~~gf~~v~~~~~ 180 (444)
.. .+...+...+|+++.|+|||||++++.......+. +.....| . ++..++++.||++......
T Consensus 106 ~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 106 PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKEL 185 (225)
T ss_dssp CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEEEE
T ss_pred CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeec
Confidence 10 01112335789999999999999999321111000 0000111 1 4888999999998776543
No 106
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.26 E-value=8.2e-12 Score=112.17 Aligned_cols=115 Identities=18% Similarity=0.170 Sum_probs=86.5
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCCC---CCCCccEEEe
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPY---PSRSFELAHC 114 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp~---~~~sFDlI~~ 114 (444)
+++|. +|||||||. + ..|+++.+++.|+++. .++.+...|...+++ ++++||+|+|
T Consensus 10 ~~~g~---~vL~~~~g~-----------v------~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQ---FVAVVWDKS-----------S------PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CCTTS---EEEEEECTT-----------S------CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCCC---EEEEecCCc-----------e------eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEE
Confidence 44444 899999996 1 1577888888888773 358888999888887 7899999999
Q ss_pred cccccccc-ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCC-hhhHHHHHHHHHHHHhcCeEEE
Q 013393 115 SRCRIDWL-QRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 115 ~~~~l~~~-~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~-~~~~~~~~~l~~l~~~~gf~~v 175 (444)
+. ++||. ++...++++++|+|||||+|++..+...... ........++.+++++.|| +.
T Consensus 70 ~~-~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 70 GL-VPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp CC-STTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred CC-hhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 88 58887 8899999999999999999999754321100 0001123578889999999 44
No 107
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.26 E-value=1.1e-10 Score=115.64 Aligned_cols=129 Identities=17% Similarity=0.103 Sum_probs=93.0
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc-CCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..++++ .++++|+ +..+..+........ ..++.+...|... +++ ++||+|+++.+ +|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~v-l~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRI-IG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESC-GG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchh-cc
Confidence 58999999999999998863 5889999 877766654433222 3468888888766 565 67999999985 66
Q ss_pred ccccHH--HHHHHHHhhcCCCeEEEEEcCCCCCC-ChhhH---------------HHHHHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPENR---------------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~--~~L~ei~rvLkPGG~lvis~p~~~~~-~~~~~---------------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+.++.. .+++++.++|||||++++.+...... .+... ....++.+++++.||+.+...
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 545555 89999999999999999986442211 11100 013477889999999877653
No 108
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.26 E-value=2.6e-11 Score=131.80 Aligned_cols=117 Identities=16% Similarity=0.277 Sum_probs=86.4
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHH------cCC
Q 013393 22 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE------RGI 90 (444)
Q Consensus 22 ~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e------~~~ 90 (444)
....+.+.+.+.. ....+|||||||+|.++..|++. .|+|+|+++.++..++.+.... ...
T Consensus 707 eqRle~LLelL~~--------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~ 778 (950)
T 3htx_A 707 KQRVEYALKHIRE--------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK 778 (950)
T ss_dssp HHHHHHHHHHHHH--------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS
T ss_pred HHHHHHHHHHhcc--------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC
Confidence 4445555555542 12348999999999999999875 3677777766655544332221 123
Q ss_pred CcEEEEecCccCCCCCCCccEEEeccccccccccHH--HHHHHHHhhcCCCeEEEEEcCC
Q 013393 91 PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG--ILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 91 ~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~--~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++.+.+.|...+++++++||+|+|.. +++|+++.. .+++++.++|||| .+++++|+
T Consensus 779 nVefiqGDa~dLp~~d~sFDlVV~~e-VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 779 SATLYDGSILEFDSRLHDVDIGTCLE-VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEEEESCTTSCCTTSCSCCEEEEES-CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred ceEEEECchHhCCcccCCeeEEEEeC-chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 57889999999999889999999998 588877765 5999999999999 88888765
No 109
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.26 E-value=1.6e-11 Score=117.65 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=89.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+ +...+..+.+...|.... +++++||+|+++. ..+
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n-~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~-~~~--- 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEAN-AKRNGVRPRFLEGSLEAA-LPFGPFDLLVANL-YAE--- 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHH-HHHTTCCCEEEESCHHHH-GGGCCEEEEEEEC-CHH---
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChhhc-CcCCCCCEEEECC-cHH---
Confidence 38999999999999988875 588999998877655543 334454577777775542 4467899999875 233
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
....++.++.++|||||+++++.... ...+.+.+.+++.||+++...
T Consensus 196 ~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 196 LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEe
Confidence 34689999999999999999975432 235678888999999887654
No 110
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.26 E-value=2.6e-11 Score=115.18 Aligned_cols=119 Identities=9% Similarity=0.081 Sum_probs=89.9
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHH-cCCCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e-~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+....... ...++.+...|....++++++||+|++..
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~--- 174 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL--- 174 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES---
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC---
Confidence 38999999999999888764 5788888776665554433332 22467888889888878888999999732
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
++...++.++.++|||||++++..+.. ....++.+.+++.||..+...
T Consensus 175 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 175 ---MEPWKVLEKAALALKPDRFLVAYLPNI--------TQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp ---SCGGGGHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHTTTTEEEEEEE
T ss_pred ---cCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceEEEE
Confidence 456689999999999999999987652 234566777788999866543
No 111
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.25 E-value=2.9e-11 Score=117.51 Aligned_cols=151 Identities=11% Similarity=0.089 Sum_probs=102.6
Q ss_pred eeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHH
Q 013393 7 KINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 7 ~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~ 83 (444)
.|.+.-..+.|..........+.+.+ +++ .+|||+|||+|.++..+++. .|+|+|+++.++..+..+
T Consensus 98 ~f~~d~~~~~f~~~~~~~~~~l~~~~-------~~~---~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n 167 (278)
T 2frn_A 98 KYKLDVAKIMFSPANVKERVRMAKVA-------KPD---ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVEN 167 (278)
T ss_dssp EEEEETTTSCCCGGGHHHHHHHHHHC-------CTT---CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHH
T ss_pred EEEEEccceeEcCCcHHHHHHHHHhC-------CCC---CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 33443333556666555555555543 223 38999999999999999873 388888888776555533
Q ss_pred HHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHH
Q 013393 84 FALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWN 161 (444)
Q Consensus 84 ~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~ 161 (444)
+..++. .+.+...|...++. +++||+|++... .+...++.++.++|||||++++.+....... ......
T Consensus 168 -~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~ 238 (278)
T 2frn_A 168 -IHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--PREPFE 238 (278)
T ss_dssp -HHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTTTHH
T ss_pred -HHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc--cccHHH
Confidence 333343 36788888888776 678999998642 3346789999999999999999664421000 112356
Q ss_pred HHHHHHHhcCeEEEe
Q 013393 162 AMYDLLKSMCWKIVS 176 (444)
Q Consensus 162 ~l~~l~~~~gf~~v~ 176 (444)
.+.+.+++.||+...
T Consensus 239 ~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 239 TFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCeeEE
Confidence 778899999998765
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.25 E-value=5e-11 Score=107.17 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=83.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCC-CCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPS-RSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~-~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+. ...+ .++.+...|... ++++ ++||+|++... ++
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~-~~ 111 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNL-QRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGS-GG 111 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH-HHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCC-TT
T ss_pred CEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHH-HHcCCCcceEEEecCHHH-hcccCCCCCEEEECCc-hH
Confidence 38999999999999999875 5777777765554444322 2233 367777777655 2232 58999998863 33
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
+...++.++.++|+|||++++..+. ......+.+++++.||++.
T Consensus 112 ---~~~~~l~~~~~~l~~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 112 ---ELQEILRIIKDKLKPGGRIIVTAIL--------LETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp ---CHHHHHHHHHHTEEEEEEEEEEECB--------HHHHHHHHHHHHHTTCCCE
T ss_pred ---HHHHHHHHHHHhcCCCcEEEEEecC--------cchHHHHHHHHHHCCCceE
Confidence 4578999999999999999997654 2345677888899998443
No 113
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.25 E-value=1.1e-10 Score=114.23 Aligned_cols=124 Identities=10% Similarity=0.127 Sum_probs=83.5
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCCcEEE-EecCccCC---CCCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP---YPSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~~~~~-~~d~~~lp---~~~~sFDlI~~~~~ 117 (444)
.++|||+|||||.++..+++. .|+|+|+++.++..+. +....+... ..++..++ ++..+||+|+|..+
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~-----r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL-----RQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH-----HTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH-----HhCcccceecccCceecchhhCCCCCCCEEEEEee
Confidence 348999999999999988874 5899999998886533 222222221 22333332 34456999998764
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCC------------Chhh-HHHHHHHHHHHHhcCeEEEee
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPEN-RRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~------------~~~~-~~~~~~l~~l~~~~gf~~v~~ 177 (444)
++ +...+|.++.|+|||||++++...+.+.. ++.. ...-.++.++++..||.+...
T Consensus 161 -f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 161 -FI---SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp -SS---CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred -Hh---hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 44 34789999999999999999874332211 1111 123457888999999987654
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.25 E-value=4.3e-11 Score=114.55 Aligned_cols=122 Identities=15% Similarity=0.043 Sum_probs=88.6
Q ss_pred CCeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCC---CCCccEEEecc
Q 013393 45 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYP---SRSFELAHCSR 116 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~---~~sFDlI~~~~ 116 (444)
..+|||||||+|..+..++. ..|+++|+++..+..+..+. ++.+. ++.+...|.+.++.. +++||+|+|..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAI-EVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 34899999999999888875 36888888877665555333 33344 588888888877643 47899999865
Q ss_pred ccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 117 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
..+...++.++.++|||||++++...... ......+...++..||+.....
T Consensus 160 -----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~------~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 160 -----VAPLCVLSELLLPFLEVGGAAVAMKGPRV------EEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp -----SCCHHHHHHHHGGGEEEEEEEEEEECSCC------HHHHTTHHHHHHHHTEEEEEEE
T ss_pred -----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc------HHHHHHHHHHHHHcCCeEEEEE
Confidence 24668899999999999999987543211 1234456677888899876653
No 115
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=4.6e-12 Score=119.70 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=75.0
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc--CCCcEEEEecCccCCCCC-----CCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPS-----RSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~--~~~~~~~~~d~~~lp~~~-----~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .|+++|+++. +++.++++ ..++.+...|...++++. .+||+|+|+.
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFPRVIGLDVSKS-----ALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSSCEEEEESCHH-----HHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CeEEEEcCCCCHHHHHHHHhCCCEEEEECCHH-----HHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 37999999999999999874 5777766654 44555554 336788888887765331 3499999988
Q ss_pred ccccccc--cHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 117 CRIDWLQ--RDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 117 ~~l~~~~--d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++|+.+ +...+++++.++|||||++++.+..
T Consensus 133 -~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 133 -GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp -SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred -hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 577777 6789999999999999998887654
No 116
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.24 E-value=5.2e-11 Score=119.84 Aligned_cols=129 Identities=21% Similarity=0.231 Sum_probs=87.3
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
..+|||||||+|.++..+++. .++++|+ +..+..+..+. ...+. ++.+...|... +++. .||+|+|+.+
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v- 257 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRF-ADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV- 257 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC-
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc-
Confidence 358999999999999998864 4667776 55544443322 22233 57888888754 4443 4999999984
Q ss_pred ccccccHH--HHHHHHHhhcCCCeEEEEEcC--CCCC-CChhhH---------------HHHHHHHHHHHhcCeEEEeee
Q 013393 119 IDWLQRDG--ILLLELDRLLRPGGYFVYSSP--EAYA-HDPENR---------------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 119 l~~~~d~~--~~L~ei~rvLkPGG~lvis~p--~~~~-~~~~~~---------------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+|+.++.. .+++++.++|||||++++.++ .... ...... ..-.++.+++++.||+.+...
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 66656654 899999999999999999776 3111 111000 022467888999999877654
No 117
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.24 E-value=4.3e-12 Score=128.73 Aligned_cols=101 Identities=14% Similarity=0.216 Sum_probs=73.5
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC----CcEEEEecCccCCCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI----PSTLGVLGTKRLPYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~----~~~~~~~d~~~lp~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+.. ..+. ++.+...|... ++++++||+|+|+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~-~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE-TNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH-HcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 48999999999999999874 58888888776655554333 3332 46677888665 566789999999873
Q ss_pred cccccc-----cHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 118 RIDWLQ-----RDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 118 ~l~~~~-----d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
+|+.. ....+++++.++|||||+++++.+..
T Consensus 302 -fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 -FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp -C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred -cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 55321 12368999999999999999976554
No 118
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.24 E-value=2.8e-11 Score=114.81 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=83.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH-----c-CCCcEEEEecCcc-CC--CCCCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----R-GIPSTLGVLGTKR-LP--YPSRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e-----~-~~~~~~~~~d~~~-lp--~~~~sFDlI 112 (444)
.+|||||||+|.++..|++. .++|+|+++.++..++.+.... . ..++.+...|+.. ++ +++++||.|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v 127 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKM 127 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEE
Confidence 47999999999999999874 5889988887776555333221 2 2468888899876 66 778999999
Q ss_pred Eecccccccccc--------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC-eEEEe
Q 013393 113 HCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIVS 176 (444)
Q Consensus 113 ~~~~~~l~~~~d--------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~g-f~~v~ 176 (444)
++... -+|... ...+++++.++|||||.|++.+.. ......+.+.+.+.+ |+.+.
T Consensus 128 ~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--------~~~~~~~~~~l~~~~~f~~~~ 191 (235)
T 3ckk_A 128 FFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--------LELHDWMCTHFEEHPLFERVP 191 (235)
T ss_dssp EEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC--------HHHHHHHHHHHHTSTTEEEEC
T ss_pred EEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCccccC
Confidence 87652 333211 147999999999999999997543 122344555555554 65543
No 119
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=7e-11 Score=118.57 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=91.8
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc-CCCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
..+|||||||+|.++..++++ .++++|+ +..+..+..+..... ..++.+...|....++++ +|+|+++.+ +
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~v-l 266 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRI-L 266 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEESC-G
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEech-h
Confidence 348999999999999999874 5789998 777665554433322 224888889988777764 399999984 6
Q ss_pred ccccc--HHHHHHHHHhhcCCCeEEEEEcCCCCCC-Chh-----------h-H------HHHHHHHHHHHhcCeEEEeee
Q 013393 120 DWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH-DPE-----------N-R------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 120 ~~~~d--~~~~L~ei~rvLkPGG~lvis~p~~~~~-~~~-----------~-~------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
|+.++ ...+++++.++|||||++++.+...... .+. . . ....++.++++++||+.+...
T Consensus 267 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~ 346 (359)
T 1x19_A 267 YSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMV 346 (359)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEE
Confidence 65565 5789999999999999998876321100 000 0 0 123467788889999877654
No 120
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.24 E-value=3.5e-11 Score=114.10 Aligned_cols=130 Identities=12% Similarity=0.126 Sum_probs=86.7
Q ss_pred CCCCCCCCCeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC---CCCCCc
Q 013393 38 KLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSF 109 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp---~~~~sF 109 (444)
.++++. +|||+|||+|.++.++++. .|+++|+++.++.. .++.++++ .++.+...|+.... ...++|
T Consensus 73 ~l~~g~---~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 73 PIRKGT---KVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRR-PNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp SCCTTC---EEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHC-TTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCC---EEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhc-CCeEEEEcccccchhhhccccce
Confidence 355555 8999999999999988762 68999998876533 33455554 57888888876532 124689
Q ss_pred cEEEeccccccccccHHH-HHHHHHhhcCCCeEEEEEcCCCC---CCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 110 ELAHCSRCRIDWLQRDGI-LLLELDRLLRPGGYFVYSSPEAY---AHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 110 DlI~~~~~~l~~~~d~~~-~L~ei~rvLkPGG~lvis~p~~~---~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
|+|++... . ++... ++..+.++|||||+|+++..... ...+ .+.+......+++.||+++...
T Consensus 148 D~I~~d~a-~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~--~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 148 DVLYVDIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDP--KEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp EEEEECCC-C---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCS--SSSTTHHHHHHHHTTEEEEEEE
T ss_pred EEEEecCC-C---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCH--HHHHHHHHHHHHHCCCEEEEEe
Confidence 99998753 2 44444 45566669999999999753322 1111 1223455667778899887764
No 121
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.23 E-value=1.8e-11 Score=118.45 Aligned_cols=117 Identities=9% Similarity=0.135 Sum_probs=85.9
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHc-C-CCcEEEEecCccCCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-G-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~-~-~~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+. ... + .++.+...|... ++++++||+|++.
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~--- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL-SEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD--- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH-HTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC---
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH-HhcCCCCcEEEEECchhc-cCcCCCccEEEEc---
Confidence 38999999999999988763 5777777665554443222 222 3 357888888766 6667889999973
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.++...+++++.++|||||+++++++.. .....+.+.+++.||..+...
T Consensus 187 ---~~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 187 ---IPDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp ---CSCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEE
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEEE
Confidence 3566789999999999999999987652 234567777888999876553
No 122
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.23 E-value=6.2e-12 Score=119.25 Aligned_cols=125 Identities=11% Similarity=0.167 Sum_probs=75.8
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCCcEEEE-ecCccC---CCCCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGV-LGTKRL---PYPSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~~~~~~-~d~~~l---p~~~~sFDlI~~~~~ 117 (444)
.++|||||||+|.++..+++. .|+|+|+++.++..+. ++...+.... .+...+ .++...||.+.+..+
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKI-----RSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHH-----HTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHH-----HhCccccccccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 348999999999999999874 5889999988876533 3222221110 111111 111112454444332
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCC------------Chh-hHHHHHHHHHHHHhcCeEEEeee
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPE-NRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~------------~~~-~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
..+ ...++.++.|+|||||++++...+.+.. ++. ......++.+++++.||++....
T Consensus 113 ~~~----l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 113 FIS----LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSC----GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hhh----HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 111 2679999999999999999864221111 111 11234578899999999877654
No 123
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=3.7e-11 Score=120.21 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=76.0
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEeccc--c
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC--R 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~--~ 118 (444)
.+|||||||+|.++..++++ .|+|+|+++ ++..+. +.++..+ .++.+...|..++++++++||+|+|... .
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 143 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYF 143 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTT
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhh
Confidence 38999999999999999875 588999886 554443 3334444 4678889999999888889999998652 2
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEE
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+.+..+...++.++.++|||||.++.
T Consensus 144 l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 144 LLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp BTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred ccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 44446677899999999999999983
No 124
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.23 E-value=3.7e-11 Score=112.94 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=82.6
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCcc----CCCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~----lp~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+.. .++. ..++.+...|... ++++ ++||+|++.
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~-~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~-- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD-ACAE-RENIIPILGDANKPQEYANIV-EKVDVIYED-- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH-HTTT-CTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH-Hhhc-CCCeEEEECCCCCcccccccC-ccEEEEEEe--
Confidence 38999999999999988763 47788777655433332 2222 2567888888877 6766 789999832
Q ss_pred cccccccH---HHHHHHHHhhcCCCeEEEEEcCC-CCCCChhhHHHH-HHHHHHHHhcCeEEEeee
Q 013393 118 RIDWLQRD---GILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 118 ~l~~~~d~---~~~L~ei~rvLkPGG~lvis~p~-~~~~~~~~~~~~-~~l~~l~~~~gf~~v~~~ 178 (444)
.++. ..+++++.++|||||+++++... ............ .++. ++++.||+.+...
T Consensus 151 ----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 151 ----VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp ----CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred ----cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 2333 67899999999999999996211 011111111223 4566 8888999877654
No 125
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=2.3e-11 Score=120.33 Aligned_cols=129 Identities=12% Similarity=0.158 Sum_probs=89.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..++++ .++++|++ ..+..+..... +.+. ++.+...|....+++++ ||+|+|+. ++
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~-~l 242 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYGND-YDLVLLPN-FL 242 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCCSC-EEEEEEES-CG
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCCCC-CcEEEEcc-hh
Confidence 48999999999999998864 46777766 44444433222 2233 47888888877777654 99999988 46
Q ss_pred cccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCC--ChhhH----------------HHHHHHHHHHHhcCeEEEeee
Q 013393 120 DWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH--DPENR----------------RIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 120 ~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~--~~~~~----------------~~~~~l~~l~~~~gf~~v~~~ 178 (444)
|+.++. ..+++++.++|||||++++.++..... .+... ..-.++.+++++.||+.+...
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 665433 689999999999999999976543211 11110 013477888999999877653
No 126
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.22 E-value=4.5e-12 Score=126.85 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=75.3
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc-
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW- 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~- 121 (444)
+|||+|||+|.++..+++. .++++|+++.++..+..+ ....+....+...|.... ++++||+|+|+.. +|+
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~-~~~g 274 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRAT-LAANGVEGEVFASNVFSE--VKGRFDMIISNPP-FHDG 274 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHH-HHHTTCCCEEEECSTTTT--CCSCEEEEEECCC-CCSS
T ss_pred eEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHhCCCCEEEEcccccc--ccCCeeEEEECCC-cccC
Confidence 7999999999999998763 688888887666555433 333456667777776543 3678999999874 553
Q ss_pred ----cccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 122 ----LQRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 122 ----~~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
..+...+++++.++|||||.+++..+..
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2455789999999999999999987654
No 127
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.22 E-value=4.8e-11 Score=105.48 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=72.3
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC--------CCCCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp--------~~~~sFDlI 112 (444)
.+|||+|||+|.++..+++ ..++++|+++ +... .++.+...|....+ +++++||+|
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 3899999999999988865 3688999988 5421 45778888887766 677899999
Q ss_pred EeccccccccccH-----------HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 113 HCSRCRIDWLQRD-----------GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~l~~~~d~-----------~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+++. .+++..+. ..+++++.++|||||.++++.+.
T Consensus 93 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 93 MSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EECC-CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9976 35554444 68999999999999999997654
No 128
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=2.7e-11 Score=121.51 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=77.3
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCC--cEEEEecCccCCCCCCCccEEEeccc--c
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRC--R 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~--~~~~~~d~~~lp~~~~sFDlI~~~~~--~ 118 (444)
++|||||||+|.++..++++ .|+|+|+++ ++..+. +.++..+.. +.+...|...+++++++||+|+|... .
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 38999999999999999885 689999984 554444 344444443 78999999999998899999998641 2
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEE
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+++..+...++.++.++|||||+++.
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 34457788999999999999999984
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.22 E-value=4.4e-11 Score=110.25 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=72.7
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+.......++.+...|....+.++++||+|++.. .+++..
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~-~~~~~~ 157 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA-APPEIP 157 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS-BCSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc-chhhhh
Confidence 38999999999999999874 677888777655544433332222357888888877666678999999987 466655
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+ ++.++|||||+++++.+.
T Consensus 158 ~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 158 T------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp T------HHHHTEEEEEEEEEEECS
T ss_pred H------HHHHhcccCcEEEEEEcC
Confidence 4 689999999999998766
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.21 E-value=1.2e-11 Score=114.16 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=85.1
Q ss_pred CCeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHH
Q 013393 5 GEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQ 81 (444)
Q Consensus 5 g~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~ 81 (444)
|..+..|.+ ..+....+.+.+.+.+.+... .++ .+|||+|||+|.++..++.+ .|+++|+++.++..++
T Consensus 22 g~~l~~~~~-~~~rp~~~~~~~~l~~~l~~~----~~~---~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~ 93 (201)
T 2ift_A 22 GRKLPVLNS-EGLRPTGDRVKETLFNWLMPY----IHQ---SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLK 93 (201)
T ss_dssp TCEEECC----------CHHHHHHHHHHHHH----HTT---CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CcEecCCCC-CCcCcCHHHHHHHHHHHHHHh----cCC---CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHH
Confidence 445555553 233444455555555555321 122 38999999999999986653 4788877776665554
Q ss_pred HHHHHHcC---CCcEEEEecCccCC--CCCCC-ccEEEeccccccccccHHHHHHHH--HhhcCCCeEEEEEcCCC
Q 013393 82 IQFALERG---IPSTLGVLGTKRLP--YPSRS-FELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 82 i~~a~e~~---~~~~~~~~d~~~lp--~~~~s-FDlI~~~~~~l~~~~d~~~~L~ei--~rvLkPGG~lvis~p~~ 149 (444)
.+. ...+ .++.+...|...+. .++++ ||+|+++.. ++ ..+...++.++ .++|||||.++++....
T Consensus 94 ~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 94 KNL-QTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHH-HHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHH-HHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 333 3334 36788888876643 23678 999999873 44 35667889998 77899999999976553
No 131
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.21 E-value=7.3e-11 Score=117.83 Aligned_cols=130 Identities=10% Similarity=0.120 Sum_probs=91.3
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCC-CCCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP-YPSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp-~~~~sFDlI~~~~~ 117 (444)
..+|||||||+|.++..++++ .++++|+ +..+..+.. ...+.+. ++.+...|....+ ++++.||+|+|+.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~- 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARK-TIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND- 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHH-HHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES-
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHH-HHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec-
Confidence 458999999999999999873 5778888 555544443 3333333 4788888877765 2346699999998
Q ss_pred cccccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCC--Chhh----------------HHHHHHHHHHHHhcCeEEEee
Q 013393 118 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH--DPEN----------------RRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 118 ~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~--~~~~----------------~~~~~~l~~l~~~~gf~~v~~ 177 (444)
++|+.++. ..+++++.++|||||++++.++..... .+.. .....++.+++++.||+++..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 46665655 689999999999999999976332111 0100 011246889999999998874
No 132
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.21 E-value=2.8e-11 Score=116.67 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=66.9
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCC-----CCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-----PSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~-----~~~sFDlI~~~~~~ 118 (444)
.+|||||||+|.++..|+++ .|+++|+ ++.+++.|+++.... +...+...++. .+++||+|+|+.+
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~~V~gvD~-----S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~- 119 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGASVTVFDF-----SQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRL- 119 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTCEEEEEES-----CHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESC-
T ss_pred CEEEEEeCcchHHHHHHHhcCCEEEEEEC-----CHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhh-
Confidence 38999999999999999986 4555554 555666666653222 22233333332 2578999999984
Q ss_pred cccc--ccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 119 IDWL--QRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 119 l~~~--~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++|. ++...+++++.++| |||.++++.+.
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 5553 34567999999999 99999998654
No 133
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.21 E-value=3.6e-11 Score=120.30 Aligned_cols=125 Identities=13% Similarity=0.037 Sum_probs=84.9
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHH-HHH--HcCCCcEEEEecCccCCCCCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQ-FAL--ERGIPSTLGVLGTKRLPYPSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~-~a~--e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~ 117 (444)
..+|||||||+|.++..++++ .++++|++ +...+ .+. ....++.+...|+. .++| +||+|+++.
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-----~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~- 255 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-----EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR- 255 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-----HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES-
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-----HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh-
Confidence 348999999999999999873 34555552 22110 000 11235788888875 4455 899999998
Q ss_pred cccccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCCChh-h---------------HHHHHHHHHHHHhcCeEEEeee
Q 013393 118 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPE-N---------------RRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 118 ~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~~~-~---------------~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
++|+.++. ..+|+++.++|||||++++.+......... . .....++.+++++.||+.+...
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 47766776 599999999999999999976432211110 0 0123478899999999887654
No 134
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=1.5e-11 Score=117.94 Aligned_cols=91 Identities=26% Similarity=0.445 Sum_probs=74.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .++++ |+++.+++.|+++..++.+...|...+|+++++||+|+|+.. .
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~v-----D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~-- 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITTFGL-----DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P-- 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEEEEE-----ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C--
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeEEEE-----eCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h--
Confidence 48999999999999999875 35555 455667777888777888999999889988899999998763 1
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
.++.++.++|||||++++.++..
T Consensus 159 -----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 -----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999987664
No 135
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.19 E-value=1.9e-10 Score=115.12 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=89.3
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
..+|||||||+|.++..+++. .++++|+ +..+..+..+. ...+. ++.+...|..+ +++. .||+|+++.+
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v- 258 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYL-KDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV- 258 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC-
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc-
Confidence 348999999999999998863 4566776 65554444332 23333 57888888654 4443 4999999984
Q ss_pred ccccccH--HHHHHHHHhhcCCCeEEEEEcCC-CC-CCChhhH---------------HHHHHHHHHHHhcCeEEEeeec
Q 013393 119 IDWLQRD--GILLLELDRLLRPGGYFVYSSPE-AY-AHDPENR---------------RIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 119 l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~-~~-~~~~~~~---------------~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
+|+.++. ..+++++.++|||||++++.++. .. ....... ..-.++.++++++||+++....
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 6665655 48999999999999999998765 21 1111100 0124778899999998876543
No 136
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.19 E-value=3.6e-11 Score=108.24 Aligned_cols=135 Identities=14% Similarity=0.077 Sum_probs=92.1
Q ss_pred cCCeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHH
Q 013393 4 NGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHEN 80 (444)
Q Consensus 4 ~g~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a 80 (444)
.|..|.+|.+ .......+...+.+.+.+.. +.+ ..+|||+|||+|.++..+++. .|+++|+++.++..+
T Consensus 12 ~~~~~~~~~~-~~~rp~~~~~~~~~~~~l~~----~~~---~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a 83 (187)
T 2fhp_A 12 GGRRLKALDG-DNTRPTTDKVKESIFNMIGP----YFD---GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVI 83 (187)
T ss_dssp TTCBCCCCCC-CSSCCCCHHHHHHHHHHHCS----CCS---SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred cCccccCCCC-CCcCcCHHHHHHHHHHHHHh----hcC---CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHH
Confidence 3455666654 34555566777777777642 112 338999999999999988764 578888887666555
Q ss_pred HHHHHHHcCC--CcEEEEecCccC----CCCCCCccEEEeccccccccccHHHHHHHH--HhhcCCCeEEEEEcCCC
Q 013393 81 QIQFALERGI--PSTLGVLGTKRL----PYPSRSFELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 81 ~i~~a~e~~~--~~~~~~~d~~~l----p~~~~sFDlI~~~~~~l~~~~d~~~~L~ei--~rvLkPGG~lvis~p~~ 149 (444)
+.+.. ..+. ++.+...|.... ++++++||+|+++.. .+ ..+....+..+ .++|+|||++++..+..
T Consensus 84 ~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 84 KENIA-ITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHH-HHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHH-HhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 53332 3333 577888886552 223678999999863 33 35566777777 89999999999987654
No 137
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.19 E-value=3.9e-11 Score=121.97 Aligned_cols=123 Identities=13% Similarity=0.050 Sum_probs=87.6
Q ss_pred cccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhh---C-CceEEEcCcccchHHHHHH------H
Q 013393 16 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---H-DIIAMSLAPNDVHENQIQF------A 85 (444)
Q Consensus 16 ~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~---~-~V~gvdis~~dis~a~i~~------a 85 (444)
.|.......+..+.+.+.+ .++. +|||||||+|.++..++. . .++|+|+++.++..+..+. +
T Consensus 153 vYGEt~~~~i~~il~~l~l-----~~gd---~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~ 224 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKM-----TDDD---LFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWM 224 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCC-----CTTC---EEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCC-----CCCC---EEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555543 3344 899999999999988875 2 3899999886654443321 2
Q ss_pred HHcC---CCcEEEEecCccCCCCC--CCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 86 LERG---IPSTLGVLGTKRLPYPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 86 ~e~~---~~~~~~~~d~~~lp~~~--~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+..+ .++.+..+|+..+|+++ ..||+|+++. .+ |.++....|.+++|+|||||+|+++.+.
T Consensus 225 ~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn-~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f 290 (438)
T 3uwp_A 225 KWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNN-FA-FGPEVDHQLKERFANMKEGGRIVSSKPF 290 (438)
T ss_dssp HHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECC-TT-CCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred HHhCCCCCCeEEEECcccCCccccccCCccEEEEcc-cc-cCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence 2223 46889999998888753 4799999876 34 3478888999999999999999986543
No 138
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.19 E-value=9.9e-11 Score=113.57 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=75.3
Q ss_pred CCeEEEECCCc---chHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC-----------CCC
Q 013393 45 IRNVLDVGCGV---ASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----------YPS 106 (444)
Q Consensus 45 ~~rVLDVGCGt---G~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp-----------~~~ 106 (444)
.++|||||||+ |.++..+.+ ..|+++|+++.++..++... ....++.+...|+...+ ++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALL--AKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH--TTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhc--CCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 35899999999 988766543 46888888776654444322 11346788888875421 233
Q ss_pred CCccEEEecccccccccc--HHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 107 RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 107 ~sFDlI~~~~~~l~~~~d--~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
.+||+|+++. ++||+++ ...+|+++.++|||||+|+++....
T Consensus 156 ~~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 4899999888 6888776 7899999999999999999987543
No 139
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.18 E-value=8.8e-11 Score=111.61 Aligned_cols=116 Identities=11% Similarity=0.178 Sum_probs=84.7
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC-C-cEEEEecCccCCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI-P-STLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~-~-~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+.. ..+. + +.+...|.... +++++||+|++..
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK-WAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH-HHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH-HcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 38999999999999988764 57788777665544443332 2243 3 78888887643 6778899999743
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC--eEEEee
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC--WKIVSK 177 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~g--f~~v~~ 177 (444)
++...++.++.++|||||++++..+.. ....++.+.+++.| |..+..
T Consensus 171 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 171 ----PQPERVVEHAAKALKPGGFFVAYTPCS--------NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHTGGGBSCCEE
T ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEECCH--------HHHHHHHHHHHHcCCCccccEE
Confidence 456689999999999999999976552 23456777888888 865543
No 140
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.18 E-value=7.6e-11 Score=108.26 Aligned_cols=114 Identities=13% Similarity=0.026 Sum_probs=81.1
Q ss_pred CeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++ ..++++|+++..+..+.... ...+. ++.+...|...++ ++++||+|+|+.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~---- 140 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQ-HELKLENIEPVQSRVEEFP-SEPPFDGVISRA---- 140 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHTTCSSEEEEECCTTTSC-CCSCEEEEECSC----
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCeEEEecchhhCC-ccCCcCEEEEec----
Confidence 3899999999999988875 36788888776655444332 23343 4788888887766 457899999764
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
..+...++.++.++|+|||++++..... .-+++.++++ ||+.+..
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~~~~---------~~~~~~~~~~--g~~~~~~ 185 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALKGQM---------PEDEIALLPE--EYQVESV 185 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEESSC---------CHHHHHTSCT--TEEEEEE
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEeCCC---------chHHHHHHhc--CCceeee
Confidence 2567799999999999999999964331 1123444444 8877653
No 141
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.18 E-value=1.8e-10 Score=111.32 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=83.5
Q ss_pred CeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEecccc--
Q 013393 46 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCR-- 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~~~-- 118 (444)
.+|||+|||+|.++..+++ ..++++|+++..+..+..+.. ..+. ++.+...|.... +++++||+|+|+...
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~-~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ-HLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH-HHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBC
T ss_pred CEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEEcchhhh-cccCCccEEEECCCCCC
Confidence 3899999999999999884 367888877766655543332 2343 578888876552 346789999997321
Q ss_pred ----------cccc------------ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 119 ----------IDWL------------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 119 ----------l~~~------------~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
++|. .+...++.++.++|||||++++..+.. ...++.+++++.||+.+
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~Gf~~v 258 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ---------QGEAVRQAFILAGYHDV 258 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS---------CHHHHHHHHHHTTCTTC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch---------HHHHHHHHHHHCCCcEE
Confidence 1121 234688999999999999999975431 13467788888899644
No 142
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.17 E-value=1.2e-11 Score=113.40 Aligned_cols=120 Identities=12% Similarity=0.001 Sum_probs=71.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCC-----CCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-----RSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~-----~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .++++|+++.++..+..+.. ..+.++.+...|... ++++ ++||+|+|+.
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~np 109 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE-RFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNP 109 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-HHHHHHHTTCCBSEEEECC
T ss_pred CEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HhCCceEEEEcchHh-hhhhhhhccCcccEEEECC
Confidence 48999999999999999874 57888888776655443322 223356666667655 4444 8999999964
Q ss_pred cccccccc--------------------------HHHHHHHHHhhcCCCeE-EEEEcCCCCCCChhhHHHHHHHHHHHH-
Q 013393 117 CRIDWLQR--------------------------DGILLLELDRLLRPGGY-FVYSSPEAYAHDPENRRIWNAMYDLLK- 168 (444)
Q Consensus 117 ~~l~~~~d--------------------------~~~~L~ei~rvLkPGG~-lvis~p~~~~~~~~~~~~~~~l~~l~~- 168 (444)
. .+...+ ...+++++.++|||||+ +++..+. .....+.++++
T Consensus 110 p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~~l~~ 179 (215)
T 4dzr_A 110 P-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH---------NQADEVARLFAP 179 (215)
T ss_dssp C-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---------SCHHHHHHHTGG
T ss_pred C-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---------ccHHHHHHHHHH
Confidence 2 111111 16788999999999999 5554432 12346677888
Q ss_pred -hcCeEEEee
Q 013393 169 -SMCWKIVSK 177 (444)
Q Consensus 169 -~~gf~~v~~ 177 (444)
+.||..+..
T Consensus 180 ~~~gf~~~~~ 189 (215)
T 4dzr_A 180 WRERGFRVRK 189 (215)
T ss_dssp GGGGTEECCE
T ss_pred hhcCCceEEE
Confidence 888866543
No 143
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=1.1e-10 Score=114.93 Aligned_cols=128 Identities=13% Similarity=0.148 Sum_probs=86.7
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHH----HcCCCcEEEEecCccCCC--CCCCccEEEe
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKRLPY--PSRSFELAHC 114 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~----e~~~~~~~~~~d~~~lp~--~~~sFDlI~~ 114 (444)
+++|||||||+|.++..+++. .++++|+++..+..+...+.. ....++.+...|...++. ++++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 358999999999999999874 467777776555444332211 013467888888766543 4688999998
Q ss_pred ccccccccccH----HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 115 SRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 115 ~~~~l~~~~d~----~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
... .++.+.. ..+++++.++|||||++++.....+.. ......+.+.+++.||..+..
T Consensus 176 d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~~ 237 (304)
T 3bwc_A 176 DTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQY 237 (304)
T ss_dssp ECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEEE
T ss_pred CCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEEE
Confidence 653 3432222 589999999999999999987654321 234567778888889975543
No 144
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.16 E-value=5.3e-11 Score=109.91 Aligned_cols=134 Identities=12% Similarity=0.046 Sum_probs=86.7
Q ss_pred cCCeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHH
Q 013393 4 NGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHEN 80 (444)
Q Consensus 4 ~g~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a 80 (444)
.|..+..|.+ ..+....+...+.+.+.+... + ++ .+|||+|||+|.++..++.+ .|+++|+++.++..+
T Consensus 22 ~g~~l~~~~~-~~~rp~~~~~~~~l~~~l~~~---~-~~---~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a 93 (202)
T 2fpo_A 22 RGRKLPVPDS-PGLRPTTDRVRETLFNWLAPV---I-VD---AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQL 93 (202)
T ss_dssp TTCEEECCCC-------CHHHHHHHHHHHHHH---H-TT---CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred cCcEecCCCC-CCCCCCHHHHHHHHHHHHHhh---c-CC---CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHH
Confidence 3455666553 334444455555555555421 0 12 38999999999999986654 577887777666555
Q ss_pred HHHHHHHcC-CCcEEEEecCcc-CCCCCCCccEEEeccccccccccHHHHHHHHHh--hcCCCeEEEEEcCC
Q 013393 81 QIQFALERG-IPSTLGVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELDR--LLRPGGYFVYSSPE 148 (444)
Q Consensus 81 ~i~~a~e~~-~~~~~~~~d~~~-lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~r--vLkPGG~lvis~p~ 148 (444)
+.+. ...+ .++.+...|... ++.++++||+|++... ++ ..+...+++++.+ +|+|||+++++...
T Consensus 94 ~~~~-~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 94 IKNL-ATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHH-HHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHH-HHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4332 3334 367888888766 5666678999998763 33 3566778888865 59999999997654
No 145
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.15 E-value=6.5e-11 Score=114.96 Aligned_cols=97 Identities=13% Similarity=0.210 Sum_probs=69.8
Q ss_pred CeEEEECCCcch----HHHHHhhC--------CceEEEcCcccchHHHHHHHHHcC------------------------
Q 013393 46 RNVLDVGCGVAS----FGAYLLSH--------DIIAMSLAPNDVHENQIQFALERG------------------------ 89 (444)
Q Consensus 46 ~rVLDVGCGtG~----~a~~La~~--------~V~gvdis~~dis~a~i~~a~e~~------------------------ 89 (444)
.+|||+|||||. ++..|++. .|+|+|+++ .+++.|++.-
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~-----~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~ 181 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT-----EVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGP 181 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH-----HHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTT
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH-----HHHHHHHhcCCchhhhhcCCHHHHHHHhhccccC
Confidence 489999999997 66666542 355665555 4445554420
Q ss_pred ------------CCcEEEEecCccCCCC-CCCccEEEeccccccccccH--HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 90 ------------IPSTLGVLGTKRLPYP-SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 90 ------------~~~~~~~~d~~~lp~~-~~sFDlI~~~~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
..+.|...|....|++ .++||+|+|.+ +++|.++. .+++.++++.|+|||+|++....
T Consensus 182 ~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn-vliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 182 HEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN-VMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp SCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS-SGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred CCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECC-chHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 1467888887776665 57899999998 46665554 68999999999999999995433
No 146
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.15 E-value=2e-11 Score=108.15 Aligned_cols=132 Identities=20% Similarity=0.264 Sum_probs=85.4
Q ss_pred CCeeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHH
Q 013393 5 GEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQI 82 (444)
Q Consensus 5 g~~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i 82 (444)
+..+..+.+ +........+.+.+.+.. .++++ .+|||+|||+|.++..+++. .++++|+++.++..+..
T Consensus 11 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~---~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~ 81 (171)
T 1ws6_A 11 GVALKVPAS---ARPSPVRLRKALFDYLRL---RYPRR---GRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKE 81 (171)
T ss_dssp TCEECCCTT---CCCCCHHHHHHHHHHHHH---HCTTC---CEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred CeEecCCCC---CCCCHHHHHHHHHHHHHh---hccCC---CeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 444555554 444455566655555542 11122 38999999999999999875 36777777665544443
Q ss_pred HHHHHcCCCcEEEEecCcc-CC-CC--CCCccEEEeccccccccccHHHHHHHHH--hhcCCCeEEEEEcCCC
Q 013393 83 QFALERGIPSTLGVLGTKR-LP-YP--SRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 149 (444)
Q Consensus 83 ~~a~e~~~~~~~~~~d~~~-lp-~~--~~sFDlI~~~~~~l~~~~d~~~~L~ei~--rvLkPGG~lvis~p~~ 149 (444)
+.. ..+.++.+...|... ++ .+ .++||+|+++.. ++ .+...+++.+. ++|||||+++++.+..
T Consensus 82 ~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 82 NVR-RTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHH-HHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred HHH-HcCCceEEEeccHHHHHHhhhccCCceEEEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 322 234477888888655 22 11 347999999863 33 45556777777 9999999999987653
No 147
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.15 E-value=1.3e-10 Score=117.82 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=76.3
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..++++ .|+|+|++ .++..+. +.++..+. .+.+...|+..++++ ++||+|+|.. +.+
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~-~~~ 140 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEW-MGY 140 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECC-CBT
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcC-hhh
Confidence 48999999999999999885 68999998 6665444 44444544 378889999998887 8899999965 233
Q ss_pred cc---ccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 121 WL---QRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 121 ~~---~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+. .....++.++.++|||||+++++.
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 32 457789999999999999998743
No 148
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=1.2e-10 Score=112.21 Aligned_cols=115 Identities=18% Similarity=0.216 Sum_probs=83.5
Q ss_pred eEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHH-c--CCCcEEEEecCccCCCCCCCccEEEecccc
Q 013393 47 NVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-R--GIPSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e-~--~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
+|||+|||+|.++..+++. .++++|+++..+..+..+.... . ..++.+...|....++++++||+|++..
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~-- 179 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM-- 179 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES--
T ss_pred EEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC--
Confidence 8999999999999988763 5788887776655554433333 1 2467888889888888788999999743
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHh-cCeEEE
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIV 175 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~-~gf~~v 175 (444)
++...++.++.++|+|||++++..+.. ....++.+.+++ .+|...
T Consensus 180 ----~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 180 ----LAPWEVLDAVSRLLVAGGVLMVYVATV--------TQLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHHSSBCCC
T ss_pred ----cCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcCCc
Confidence 355689999999999999999987652 223344444444 677543
No 149
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.13 E-value=4.3e-10 Score=109.27 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=83.7
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEc-CcccchHHHHHHH----HHcC------CCcEEEEecCccCC--C----C
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSL-APNDVHENQIQFA----LERG------IPSTLGVLGTKRLP--Y----P 105 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdi-s~~dis~a~i~~a----~e~~------~~~~~~~~d~~~lp--~----~ 105 (444)
++|||+|||+|.++..+++. .|+++|+ ++.++..++.+.. ...+ .++.+...+..... + +
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 38999999999999988874 5788888 6766655543331 2222 24555544432211 1 3
Q ss_pred CCCccEEEeccccccccccHHHHHHHHHhhcC---C--CeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC-eEEEeee
Q 013393 106 SRSFELAHCSRCRIDWLQRDGILLLELDRLLR---P--GGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIVSKK 178 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLk---P--GG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~g-f~~v~~~ 178 (444)
+++||+|+++.+ +++.++...+++++.++|+ | ||.+++......... ......+.+.+++.| |++....
T Consensus 161 ~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~---~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 161 LQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL---AERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp CSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEEEE
T ss_pred CCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc---chhHHHHHHHHHhcCCEEEEEec
Confidence 578999999884 6667888999999999999 9 998776533321110 011235566788899 9876553
No 150
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.13 E-value=1.9e-10 Score=116.04 Aligned_cols=123 Identities=14% Similarity=0.053 Sum_probs=85.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
..+|||||||+|.++..++++ .++++|+ + .+++.+++ ..++.+...|+.. |+|++ |+|+++.+ +|
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~-~~~v~~~~~d~~~-~~p~~--D~v~~~~v-lh 272 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-P-----HVIQDAPA-FSGVEHLGGDMFD-GVPKG--DAIFIKWI-CH 272 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCC-CTTEEEEECCTTT-CCCCC--SEEEEESC-GG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-H-----HHHHhhhh-cCCCEEEecCCCC-CCCCC--CEEEEech-hh
Confidence 358999999999999999873 3556655 3 33344433 2568888888776 77754 99999984 66
Q ss_pred ccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCCC--h-hh-------H-----------HHHHHHHHHHHhcCeEEEee
Q 013393 121 WLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHD--P-EN-------R-----------RIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 121 ~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~--~-~~-------~-----------~~~~~l~~l~~~~gf~~v~~ 177 (444)
+.++. ..+|++++++|||||++++.+....... . .. . ..-.++.++++++||+.+..
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 352 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKV 352 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEE
Confidence 54554 3789999999999999999764322111 0 00 0 01236788999999987765
Q ss_pred e
Q 013393 178 K 178 (444)
Q Consensus 178 ~ 178 (444)
.
T Consensus 353 ~ 353 (368)
T 3reo_A 353 A 353 (368)
T ss_dssp E
T ss_pred E
Confidence 4
No 151
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.12 E-value=4.2e-11 Score=109.56 Aligned_cols=98 Identities=11% Similarity=0.211 Sum_probs=70.5
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+.+|||+|||+|.++..++.. .++++|+++.++.-+..+ +...+....+.+.|.... .+.++||+|.+.. ++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~-~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k-~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI-IGKLKTTIKYRFLNKESD-VYKGTYDVVFLLK-MLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH-HHHSCCSSEEEEECCHHH-HTTSEEEEEEEET-CHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCccEEEeccccc-CCCCCcChhhHhh-HHH
Confidence 348999999999999999653 566666665555443322 333355545656665444 3568899999888 688
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEE
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis 145 (444)
++++.+..+.++.+.|||||.|+-.
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 8866667778999999999998853
No 152
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.11 E-value=2e-10 Score=114.12 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=74.8
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccc--c
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC--R 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~--~ 118 (444)
.+|||||||+|.++..++++ .|+++|+++ ++..+. +.+...+. ++.+...|...+++++++||+|+|... .
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAK-ELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHH-HHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 38999999999999999874 588999984 544333 34444443 478888999888888789999998742 2
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEE
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+.+......++.++.++|||||+++.
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 33445677899999999999999984
No 153
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.10 E-value=5.3e-11 Score=120.65 Aligned_cols=93 Identities=13% Similarity=0.103 Sum_probs=74.7
Q ss_pred CCeEEEECCC------cchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCC------CC
Q 013393 45 IRNVLDVGCG------VASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP------SR 107 (444)
Q Consensus 45 ~~rVLDVGCG------tG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~------~~ 107 (444)
..+||||||| +|..+..+++ ..|+|+|+++.+. ....++.+.++|..++|+. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhcccC
Confidence 3489999999 7666665554 3789999998752 2356789999999888876 68
Q ss_pred CccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 108 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 108 sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+||+|+|.. .|+..+...+|++++++|||||++++.+..
T Consensus 288 sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999999875 355678889999999999999999997643
No 154
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.10 E-value=2.7e-10 Score=112.65 Aligned_cols=126 Identities=19% Similarity=0.172 Sum_probs=85.5
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEecc---
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSR--- 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~--- 116 (444)
.+|||+|||+|..+..+++ ..|+++|+++..+..+..+.. ..+. ++.+...|...++..+++||+|++..
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~-~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS-RLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH-HHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH-HhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 3899999999999999885 247888887766655443332 2344 67888888877765457899999841
Q ss_pred --cccccccc----------------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 117 --CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 117 --~~l~~~~d----------------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
..++..++ ...+|.++.++|||||++++++-..... +. -..+..++++.+|+.+..
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~--En---e~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE--EN---EFVIQWALDNFDVELLPL 272 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHSSEEEECC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH--Hh---HHHHHHHHhcCCCEEecC
Confidence 11222121 1488999999999999999987554321 11 124566777888877643
No 155
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.10 E-value=3.4e-10 Score=111.85 Aligned_cols=95 Identities=11% Similarity=0.055 Sum_probs=71.7
Q ss_pred CeEEEECCCcchHHHHHhhC--C---ceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--D---IIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~---V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..+++. . |+++|+++..+..+..+. ...+ .++.+...|....+.++++||+|++... +
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~-~ 154 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV-ERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG-V 154 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB-B
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEECChhhccccCCCeEEEEEcCC-H
Confidence 38999999999999998863 3 888888876665544333 2334 3578888888775555678999999884 6
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++.. .++.++|||||+++++..+
T Consensus 155 ~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 155 DEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHH------HHHHHhcCCCcEEEEEECC
Confidence 6654 5788999999999997544
No 156
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.09 E-value=3.8e-10 Score=110.69 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=73.9
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH-----cCCCcEEEEecCccC-CCCCCCccEEEe
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----RGIPSTLGVLGTKRL-PYPSRSFELAHC 114 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e-----~~~~~~~~~~d~~~l-p~~~~sFDlI~~ 114 (444)
+++|||||||+|.++..+++. .|+++|+++..+..++..+... ...++.+...|.... ...+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 458999999999999999875 4788888877665555443332 134678888886553 445688999998
Q ss_pred ccccccccccH----HHHHHHHHhhcCCCeEEEEEcCCCCCC
Q 013393 115 SRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAH 152 (444)
Q Consensus 115 ~~~~l~~~~d~----~~~L~ei~rvLkPGG~lvis~p~~~~~ 152 (444)
.. ..++.+.. ..+++++.++|||||++++...+++..
T Consensus 164 D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~ 204 (294)
T 3adn_A 164 DC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ 204 (294)
T ss_dssp CC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSC
T ss_pred CC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccc
Confidence 65 23332222 579999999999999999976554433
No 157
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.09 E-value=2.8e-10 Score=109.90 Aligned_cols=117 Identities=13% Similarity=0.135 Sum_probs=84.2
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+ +...+. ++.+...|.... +++++||+|++..
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN-LTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV-- 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH-HHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH-HHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC--
Confidence 38999999999999888763 467777766555444322 222243 567777787665 5667899999743
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
++...++.++.++|+|||++++..+.. ....++.+.+++.||..+...
T Consensus 190 ----~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 190 ----PDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp ----SCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEEE
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEEE
Confidence 455689999999999999999987642 234566677788999766543
No 158
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.09 E-value=2.8e-10 Score=103.90 Aligned_cols=90 Identities=12% Similarity=0.172 Sum_probs=68.0
Q ss_pred CeEEEECCCcchHHHHHhhC------CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC----------------
Q 013393 46 RNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---------------- 103 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~------~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp---------------- 103 (444)
.+|||+|||+|.++..++++ .|+|+|+++.. ...++.+...|....+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------C
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccch
Confidence 38999999999999998763 48899998832 1235677788877765
Q ss_pred ---------CCCCCccEEEecccccccc----ccHH-------HHHHHHHhhcCCCeEEEEEcC
Q 013393 104 ---------YPSRSFELAHCSRCRIDWL----QRDG-------ILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 104 ---------~~~~sFDlI~~~~~~l~~~----~d~~-------~~L~ei~rvLkPGG~lvis~p 147 (444)
+++++||+|+|..+ +++. .+.. .+++++.++|||||.|++...
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56679999999763 5542 2222 378999999999999998653
No 159
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.09 E-value=4.1e-10 Score=106.95 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=73.0
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH--------cCCCcEEEEecCcc-CC--CCCCCcc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE--------RGIPSTLGVLGTKR-LP--YPSRSFE 110 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e--------~~~~~~~~~~d~~~-lp--~~~~sFD 110 (444)
.+|||||||+|.++..+++. .++|+|+++..+..+..+.... ...++.+...|+.. ++ +++++||
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d 130 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLS 130 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccC
Confidence 48999999999999999873 5889988887765555433332 22467888888765 66 7788999
Q ss_pred EEEecccccccccc--------HHHHHHHHHhhcCCCeEEEEEcC
Q 013393 111 LAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 111 lI~~~~~~l~~~~d--------~~~~L~ei~rvLkPGG~lvis~p 147 (444)
.|+.... -.|... ...++.++.++|+|||+|++.+.
T Consensus 131 ~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 131 KMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 9986531 122110 04799999999999999999643
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.09 E-value=2.1e-10 Score=107.29 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=67.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++. .++++|+++.. ++.++++.. ++.+...|......++++||+|++..+ ++
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~-----~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 145 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVDKVVSVEINEKM-----YNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWAT-AP 145 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEEESCHHH-----HHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSB-BS
T ss_pred CEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHH-----HHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCc-HH
Confidence 38999999999999999874 56777666544 444444311 678888887663324678999999884 66
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+.. .++.++|||||+++++.+.
T Consensus 146 ~~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 146 TLL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCC------HHHHHTEEEEEEEEEEECS
T ss_pred HHH------HHHHHHcCCCcEEEEEEcC
Confidence 644 3789999999999998665
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.09 E-value=9.5e-10 Score=110.24 Aligned_cols=119 Identities=16% Similarity=0.049 Sum_probs=87.0
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..++. ..++|+|+++.++..+..+ +...+. ++.+...|+..++.+.++||+|+|+....
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n-~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg 283 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA-ALASGLSWIRFLRADARHLPRFFPEVDRILANPPHG 283 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH-HHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH-HHHcCCCceEEEeCChhhCccccCCCCEEEECCCCc
Confidence 3799999999999988876 4789999988777665543 333444 68899999999887777899999964211
Q ss_pred c-------ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 120 D-------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 120 ~-------~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
. .......+++++.++|||||.+++.++.. ..+..+.+ .||+....
T Consensus 284 ~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----------~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 284 LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----------ALLKRALP-PGFALRHA 336 (354)
T ss_dssp C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----------HHHHHHCC-TTEEEEEE
T ss_pred CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----------HHHHHHhh-cCcEEEEE
Confidence 1 11123679999999999999999987651 12344555 78877654
No 162
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.09 E-value=4.6e-10 Score=113.15 Aligned_cols=123 Identities=19% Similarity=0.114 Sum_probs=85.6
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
..+|||||||+|.++..++++ .++++|+ + .+++.|++ ..++.+...|+.. |+|.+ |+|+++.+ +|
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~-~~~v~~~~~D~~~-~~p~~--D~v~~~~v-lh 270 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P-----HVISEAPQ-FPGVTHVGGDMFK-EVPSG--DTILMKWI-LH 270 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCC-CTTEEEEECCTTT-CCCCC--SEEEEESC-GG
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H-----HHHHhhhh-cCCeEEEeCCcCC-CCCCC--CEEEehHH-hc
Confidence 358999999999999999873 3556665 3 33333333 2568898999876 77754 99999985 66
Q ss_pred ccccH--HHHHHHHHhhcCCCeEEEEEcCCCCCCC---hh-------hH-----------HHHHHHHHHHHhcCeEEEee
Q 013393 121 WLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHD---PE-------NR-----------RIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 121 ~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~~~---~~-------~~-----------~~~~~l~~l~~~~gf~~v~~ 177 (444)
+.++. ..+|++++++|||||++++.+....... .. +. ..-.++.++++++||+.+..
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKS 350 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEE
Confidence 54443 4899999999999999999764422110 00 00 01236788999999987765
Q ss_pred e
Q 013393 178 K 178 (444)
Q Consensus 178 ~ 178 (444)
.
T Consensus 351 ~ 351 (364)
T 3p9c_A 351 T 351 (364)
T ss_dssp E
T ss_pred E
Confidence 4
No 163
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=5.7e-11 Score=119.93 Aligned_cols=123 Identities=15% Similarity=0.025 Sum_probs=84.9
Q ss_pred CCeEEEECCCcchHHHHHhhC--C--ceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH--D--IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~--~--V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
..+|||||||+|.++..++++ . ++++|+ + .+++.+++. .++.+...|+.. ++++ ||+|+++. ++|
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~-~lh 278 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-P-----QVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKA-VCH 278 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEES-SGG
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-H-----HHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEec-ccc
Confidence 348999999999999999874 2 344455 3 344444332 457888888766 6664 99999998 477
Q ss_pred ccccHH--HHHHHHHhhcCCCeEEEEEcCCCC--CCCh--h----hHH------------HHHHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAY--AHDP--E----NRR------------IWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~--~~L~ei~rvLkPGG~lvis~p~~~--~~~~--~----~~~------------~~~~l~~l~~~~gf~~v~~~ 178 (444)
+.++.. .+|+++.++|||||++++.+.... ...+ . ... ...++.++++++||+.+...
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 767777 999999999999999998752211 1100 0 000 12367788888888766543
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.08 E-value=1.5e-09 Score=103.33 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=72.4
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CCCC--CCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYP--SRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp~~--~~sFDlI~~~ 115 (444)
++|||||||+|..+..+++. .|+++|+++..+..++..+ .+.+. ++.+...|+.+ ++.. .++||+|++.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENL-QLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 48999999999999999874 5778887776655544333 22333 57888888655 3432 3489999986
Q ss_pred cccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 116 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 116 ~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
. ...+...+++++.++|||||++++....
T Consensus 144 ~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 144 A----DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp S----CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred C----chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 4 2356678999999999999999986544
No 165
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.08 E-value=3.7e-10 Score=113.19 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=73.7
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..++++ .|+++|+++ ++.. ..+.++..+ .++.+...|...++++ ++||+|+|.....+
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~-a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQH-AEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 128 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHH-HHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTT
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHH-HHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhc
Confidence 48999999999999998874 688999885 5433 333444444 4678888998888766 67999999874333
Q ss_pred cc-ccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 121 WL-QRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 121 ~~-~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+. ++....+.++.++|||||.++++.
T Consensus 129 ~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 129 LFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp BTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 32 345678889999999999999643
No 166
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=3.6e-10 Score=108.55 Aligned_cols=116 Identities=11% Similarity=0.068 Sum_probs=78.5
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc-------CC--CcEEEEecCccC-------CCC
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-------GI--PSTLGVLGTKRL-------PYP 105 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-------~~--~~~~~~~d~~~l-------p~~ 105 (444)
.+|||+|||+|.++..++++ .++++|+++. +++.|+++ +. ++.+...|...+ +++
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~-----~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEKAEVTLYERSQE-----MAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHH-----HHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred CEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 48999999999999998874 4566666554 44444443 22 267888887766 356
Q ss_pred CCCccEEEecccccc----------------c-cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHH
Q 013393 106 SRSFELAHCSRCRID----------------W-LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLK 168 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~----------------~-~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~ 168 (444)
+++||+|+|+.-... . ..+...+++++.++|||||+|++..+.. ...++.+.++
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~ 183 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACG 183 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHT
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHH
Confidence 789999999731111 0 1236789999999999999999865431 2345666666
Q ss_pred hcCeEEEe
Q 013393 169 SMCWKIVS 176 (444)
Q Consensus 169 ~~gf~~v~ 176 (444)
+. |....
T Consensus 184 ~~-~~~~~ 190 (260)
T 2ozv_A 184 SR-FGGLE 190 (260)
T ss_dssp TT-EEEEE
T ss_pred hc-CCceE
Confidence 54 65443
No 167
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=5.8e-10 Score=103.03 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=68.5
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++ ..++++|+++..+..+..........++.+...|.......+++||+|++..+ ++
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 157 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA-GP 157 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB-BS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc-hH
Confidence 3899999999999988876 35788887776655444333322223577777776432222578999999884 66
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+.. .++.++|||||++++..+.
T Consensus 158 ~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 158 KIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SCC------HHHHHTEEEEEEEEEEESS
T ss_pred HHH------HHHHHHcCCCcEEEEEECC
Confidence 544 4889999999999998665
No 168
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.07 E-value=3.8e-10 Score=116.16 Aligned_cols=100 Identities=7% Similarity=-0.008 Sum_probs=73.1
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHH--HHHHHHH----cC---CCcEEEEecCccC--CC--CCCC
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHEN--QIQFALE----RG---IPSTLGVLGTKRL--PY--PSRS 108 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a--~i~~a~e----~~---~~~~~~~~d~~~l--p~--~~~s 108 (444)
.+|||||||+|.++..+++. .|+|+|+++..+..+ |++.+++ .+ .++.+...|.... ++ ..++
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~ 323 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQ 323 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGG
T ss_pred CEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCC
Confidence 38999999999999998872 589999998776555 3333333 34 4567766654322 22 2468
Q ss_pred ccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 109 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 109 FDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
||+|+++.. + +.++...+|.++.++|||||.+++..+
T Consensus 324 FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 324 CDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp CSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 999998763 3 447788899999999999999999643
No 169
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.07 E-value=7.5e-11 Score=105.69 Aligned_cols=121 Identities=17% Similarity=0.052 Sum_probs=76.6
Q ss_pred ccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcE
Q 013393 19 DGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PST 93 (444)
Q Consensus 19 ~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~ 93 (444)
...+...+.+.+.+.. +.+ ..+|||+|||+|.++..+++. .++++|+++.++..++. .++..+. ++.
T Consensus 13 p~~~~~~~~~~~~l~~----~~~---~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~ 84 (177)
T 2esr_A 13 PTSDKVRGAIFNMIGP----YFN---GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFT 84 (177)
T ss_dssp -----CHHHHHHHHCS----CCC---SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEE
T ss_pred cCHHHHHHHHHHHHHh----hcC---CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceE
Confidence 3344455555555541 122 348999999999999998875 46777766655543332 2222333 467
Q ss_pred EEEecCcc-CCCCCCCccEEEeccccccccccHHHHHHHHH--hhcCCCeEEEEEcCCC
Q 013393 94 LGVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 149 (444)
Q Consensus 94 ~~~~d~~~-lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~--rvLkPGG~lvis~p~~ 149 (444)
+...|..+ ++..+++||+|+++.. .+. .....++..+. ++|||||+++++.+..
T Consensus 85 ~~~~d~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 85 LLKMEAERAIDCLTGRFDLVFLDPP-YAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EECSCHHHHHHHBCSCEEEEEECCS-SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEECcHHHhHHhhcCCCCEEEECCC-CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 77777655 3433467999998753 322 44567777776 9999999999977553
No 170
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.06 E-value=3.5e-10 Score=107.17 Aligned_cols=116 Identities=13% Similarity=0.067 Sum_probs=81.8
Q ss_pred CeEEEECCCcchHHHHHhh--------CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC---CCCC-CCccEEE
Q 013393 46 RNVLDVGCGVASFGAYLLS--------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAH 113 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~--------~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l---p~~~-~sFDlI~ 113 (444)
.+|||||||+|..+..|++ ..|+++|+++.++..+. ....++.+...|.... ++.+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 3899999999999988865 36899999988764443 3345788888887764 5433 4799999
Q ss_pred eccccccccccHHHHHHHHHh-hcCCCeEEEEEcCCCCCCChhhH-HHHHHHHHHHHhc--CeEEE
Q 013393 114 CSRCRIDWLQRDGILLLELDR-LLRPGGYFVYSSPEAYAHDPENR-RIWNAMYDLLKSM--CWKIV 175 (444)
Q Consensus 114 ~~~~~l~~~~d~~~~L~ei~r-vLkPGG~lvis~p~~~~~~~~~~-~~~~~l~~l~~~~--gf~~v 175 (444)
+... | .+...++.++.+ +|||||++++.+.. +... ..-..+.+++++. +|+..
T Consensus 158 ~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~~-----~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 158 IDNA--H--ANTFNIMKWAVDHLLEEGDYFIIEDMI-----PYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EESS--C--SSHHHHHHHHHHHTCCTTCEEEECSCH-----HHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred ECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEeCc-----ccccccCHHHHHHHHHhCcccEEEc
Confidence 8653 2 467889999997 99999999996541 1000 0112566677766 46543
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=5.3e-10 Score=104.39 Aligned_cols=125 Identities=13% Similarity=0.176 Sum_probs=80.4
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC---CCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp---~~~~sFDlI~~~~~ 117 (444)
.+|||+|||+|.++..+++ ..|+++|+++.++..+. +.+++. .++.+...|..... ..+++||+|++...
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 3899999999999998875 35788888776553333 233322 57788888876621 12468999998652
Q ss_pred cccccccH-HHHHHHHHhhcCCCeEEEEEcCCCC-CCChhhHHHH-HHHHHHHHhcCeEEEeee
Q 013393 118 RIDWLQRD-GILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIW-NAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 118 ~l~~~~d~-~~~L~ei~rvLkPGG~lvis~p~~~-~~~~~~~~~~-~~l~~l~~~~gf~~v~~~ 178 (444)
. ++. ..++.++.++|||||++++...... .......... .++..+ ++. |+.+...
T Consensus 153 ---~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~ 210 (227)
T 1g8a_A 153 ---Q-PTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERL 210 (227)
T ss_dssp ---S-TTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEE
T ss_pred ---C-HhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEe
Confidence 2 333 3559999999999999998732211 1111111222 355666 555 8877553
No 172
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.06 E-value=9.8e-12 Score=117.26 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=74.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .|+|+|+++.++..+..+ +...+. ++.+...|...++ ++++||+|+++. .+++
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~-~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNN-AEVYGIADKIEFICGDFLLLA-SFLKADVVFLSP-PWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECC-CCSS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCcCeEEEECChHHhc-ccCCCCEEEECC-CcCC
Confidence 38999999999999999885 577887777666544432 333343 6888899987776 567999999987 4666
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEE
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis 145 (444)
..+....+.++.++|+|||++++.
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cchhhhHHHHHHhhcCCcceeHHH
Confidence 666666888999999999997763
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.05 E-value=2.9e-10 Score=106.04 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=71.2
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CCCC-----CCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYP-----SRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp~~-----~~sFDlI 112 (444)
++|||||||+|..+..+++. .|+++|+++.++..+..+.. ..+. ++.+...|..+ ++.. .++||+|
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN-FAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH-HcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 48999999999999999873 57888887766655543332 2343 47888888644 3322 2689999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 113 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++... .++..+...++.++ ++|||||++++....
T Consensus 139 ~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 139 FLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EECSC-GGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEcCC-cccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 98763 44445555678777 999999999986543
No 174
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.04 E-value=1.7e-10 Score=115.40 Aligned_cols=122 Identities=10% Similarity=0.028 Sum_probs=85.9
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||||||+|.++..++++ .++++|+ + .+++.+++. .++.+...|+.. ++|+ ||+|+++. ++|+
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~-~lh~ 258 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P-----QVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKY-ILHN 258 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEES-CGGG
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H-----HHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeeh-hhcc
Confidence 48999999999999999864 4666665 4 344444433 347888888755 5553 99999998 4776
Q ss_pred cccHH--HHHHHHHhhcCC---CeEEEEEcCCCCCCCh-----hhH--------------HHHHHHHHHHHhcCeEEEee
Q 013393 122 LQRDG--ILLLELDRLLRP---GGYFVYSSPEAYAHDP-----ENR--------------RIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 122 ~~d~~--~~L~ei~rvLkP---GG~lvis~p~~~~~~~-----~~~--------------~~~~~l~~l~~~~gf~~v~~ 177 (444)
.++.. .+|+++.++||| ||++++.++....... ... ..-.++.++++++||+.+..
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 338 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKI 338 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEE
Confidence 67777 999999999999 9999997643211110 000 11246788888899877654
Q ss_pred e
Q 013393 178 K 178 (444)
Q Consensus 178 ~ 178 (444)
.
T Consensus 339 ~ 339 (352)
T 1fp2_A 339 S 339 (352)
T ss_dssp E
T ss_pred E
Confidence 3
No 175
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.04 E-value=7.5e-10 Score=104.20 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=68.8
Q ss_pred eEEEECCCcchHHHHHhh---CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCC-CccEEEecccccccc
Q 013393 47 NVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSR-SFELAHCSRCRIDWL 122 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~---~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~-sFDlI~~~~~~l~~~ 122 (444)
+|||+|||+|.++..+++ ..|+++|+++..+..+..+.......++.+...|. ..+++++ .||+|++... +++.
T Consensus 94 ~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~-~~~~ 171 (235)
T 1jg1_A 94 NILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAG-APKI 171 (235)
T ss_dssp CEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSB-BSSC
T ss_pred EEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCc-HHHH
Confidence 899999999999998877 47888888876655544333322223577777776 4455544 4999999874 5554
Q ss_pred ccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 123 QRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 123 ~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
. .++.++|||||+++++.+..
T Consensus 172 ~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 172 P------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp C------HHHHHTEEEEEEEEEEECSS
T ss_pred H------HHHHHhcCCCcEEEEEEecC
Confidence 3 37899999999999987653
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.03 E-value=8.3e-10 Score=110.06 Aligned_cols=127 Identities=7% Similarity=0.026 Sum_probs=84.0
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCccCCC----CCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPY----PSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~lp~----~~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+... .+. ++.+...|+..+.. ..++||+|++..
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~-~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP 233 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL-AGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDP 233 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH-HTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred CcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECcHHHHHHHHHhcCCCceEEEECC
Confidence 38999999999999999875 577777776665555433332 233 37788888655421 146899999843
Q ss_pred c---------cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 117 C---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 117 ~---------~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
- +.++..+...++.++.++|||||++++.......... ......+.+.+++.|+++.
T Consensus 234 P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~--~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 234 PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASF--YSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCH--HHHHHHHHHHTTTSCSEEE
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCH--HHHHHHHHHHHHHcCCeEE
Confidence 1 1223455678999999999999998876544322221 1222344556678888665
No 177
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.03 E-value=6.3e-10 Score=111.02 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=74.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH----cCCCcEEEEecCccC--CCCCCCccEEEe
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL--PYPSRSFELAHC 114 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e----~~~~~~~~~~d~~~l--p~~~~sFDlI~~ 114 (444)
+++|||||||+|.++..+++. .|+++|+++..+..++..+... ...++.+...|.... .+++++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 458999999999999999874 5777777776554444333221 134678888886553 234678999998
Q ss_pred cccccccc-cc---HHHHHHHHHhhcCCCeEEEEEcCCCCC
Q 013393 115 SRCRIDWL-QR---DGILLLELDRLLRPGGYFVYSSPEAYA 151 (444)
Q Consensus 115 ~~~~l~~~-~d---~~~~L~ei~rvLkPGG~lvis~p~~~~ 151 (444)
... .++. .+ ...+++++.++|||||++++.....+.
T Consensus 201 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 201 DSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp CCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred CCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 642 2221 11 368999999999999999998655443
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.03 E-value=5.8e-10 Score=104.33 Aligned_cols=94 Identities=17% Similarity=0.239 Sum_probs=70.0
Q ss_pred eEEEECCCcchHHHHHhh----------CCceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccCCCCC-CCcc
Q 013393 47 NVLDVGCGVASFGAYLLS----------HDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPS-RSFE 110 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~----------~~V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~lp~~~-~sFD 110 (444)
+|||+|||+|.++..+++ ..|+++|+++..+..+..+..... ..++.+...|... ++++ ++||
T Consensus 87 ~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD 165 (227)
T 1r18_A 87 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYN 165 (227)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEE
T ss_pred EEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCcc
Confidence 899999999999988876 268888888776655554433322 3467888888765 4544 7899
Q ss_pred EEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 111 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 111 lI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+|++... +++. +.++.+.|||||++++....
T Consensus 166 ~I~~~~~-~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 166 AIHVGAA-APDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEECSC-BSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCc-hHHH------HHHHHHHhcCCCEEEEEEec
Confidence 9999874 5543 37899999999999997654
No 179
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.03 E-value=7e-10 Score=107.79 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=68.0
Q ss_pred eEEEECCCcchHHHHHhhC-CceEEEcCcccchHHHHHH--HHHcCCCcEEE--EecCccCCCCCCCccEEEeccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQF--ALERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-~V~gvdis~~dis~a~i~~--a~e~~~~~~~~--~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
+|||+|||+|.++..++++ .|+|+|+++ +...+..+. ....+.++.+. ..|+..+| +++||+|+|..+ ++
T Consensus 85 ~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~--~~ 159 (276)
T 2wa2_A 85 TVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG--ES 159 (276)
T ss_dssp EEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC--CC
T ss_pred EEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC--cC
Confidence 8999999999999999884 799999998 432111000 00011256777 77887776 678999999763 32
Q ss_pred ccc----HH---HHHHHHHhhcCCCe--EEEEEcCC
Q 013393 122 LQR----DG---ILLLELDRLLRPGG--YFVYSSPE 148 (444)
Q Consensus 122 ~~d----~~---~~L~ei~rvLkPGG--~lvis~p~ 148 (444)
..+ .. .+|.++.++||||| .|++....
T Consensus 160 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 160 NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 222 11 37899999999999 99986544
No 180
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.03 E-value=3.6e-10 Score=106.44 Aligned_cols=97 Identities=7% Similarity=0.109 Sum_probs=72.8
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CC-CCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LP-YPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp-~~~~sFDlI~~~~~ 117 (444)
++|||+|||+|.++..+++. .++++|+++..+..++... .+.+. ++.+...|... ++ ..+++||+|++..
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~- 150 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNL-ATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA- 150 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET-
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC-
Confidence 48999999999999999872 5778888776665554333 33343 68888888755 33 3368899999764
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
...+...+++++.++|||||++++...
T Consensus 151 ---~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 151 ---AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp ---TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ---cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 235677899999999999999998543
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.02 E-value=1.7e-09 Score=101.85 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=80.8
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+....+ ..+ .++.+...|......++++||+|++..
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~----- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK-KFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV----- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHH-HTTCCTTEEEECSCTTTSCCCTTCBSEEEECS-----
T ss_pred CEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCCcEEEEEcChhhcccCCCcccEEEECC-----
Confidence 38999999999999998873 56777766655444432222 223 357777777766443567899999743
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
++...+++++.++|||||++++..+.. ....++.+.+++. |..+..
T Consensus 167 -~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 167 -REPWHYLEKVHKSLMEGAPVGFLLPTA--------NQVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp -SCGGGGHHHHHHHBCTTCEEEEEESSH--------HHHHHHHHHSTTT-EEEEEE
T ss_pred -cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHhh-CCcceE
Confidence 456688999999999999999987652 2344566666666 765443
No 182
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.02 E-value=6.6e-10 Score=103.57 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=70.3
Q ss_pred eEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccCCCCCCCccEEEecc
Q 013393 47 NVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
+|||+|||+|.++..+++ ..|+++|+++..+..+..+..... ..++.+...|....+.++++||+|++..
T Consensus 80 ~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 159 (226)
T 1i1n_A 80 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGA 159 (226)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred EEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECC
Confidence 899999999999998875 268888888766655543332211 2367888888776555567899999887
Q ss_pred ccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 117 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
. ++. ++.++.++|||||+++++...
T Consensus 160 ~-~~~------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 160 A-APV------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp B-BSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred c-hHH------HHHHHHHhcCCCcEEEEEEec
Confidence 4 433 346889999999999997654
No 183
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.02 E-value=3.7e-10 Score=107.36 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=67.6
Q ss_pred CeEEEECCCcchHHHHHhhC------CceEEEcCcccchHHHHHHHHHc--CC--C------------------------
Q 013393 46 RNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALER--GI--P------------------------ 91 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~------~V~gvdis~~dis~a~i~~a~e~--~~--~------------------------ 91 (444)
.+|||+|||+|.++..+++. .|+|+|+++.++..+..+..... +. .
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAAR 132 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhh
Confidence 48999999999999988764 46777776665544432221110 11 1
Q ss_pred -cE-------------EEEecCccCCC-----CCCCccEEEecccccccc--------ccHHHHHHHHHhhcCCCeEEEE
Q 013393 92 -ST-------------LGVLGTKRLPY-----PSRSFELAHCSRCRIDWL--------QRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 92 -~~-------------~~~~d~~~lp~-----~~~sFDlI~~~~~~l~~~--------~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+. +...|...... ..++||+|+|+...++.. .....+++++.++|||||++++
T Consensus 133 ~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 133 RLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred hhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 34 77788655321 345899999976322221 2345899999999999999999
Q ss_pred EcCC
Q 013393 145 SSPE 148 (444)
Q Consensus 145 s~p~ 148 (444)
+...
T Consensus 213 ~~~~ 216 (250)
T 1o9g_A 213 TDRS 216 (250)
T ss_dssp EESS
T ss_pred eCcc
Confidence 5443
No 184
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.01 E-value=2.6e-09 Score=107.22 Aligned_cols=125 Identities=16% Similarity=0.116 Sum_probs=86.3
Q ss_pred CCeEEEECCCcchHHHHHhhC--C--ceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccCCCCCCCccEEEec
Q 013393 45 IRNVLDVGCGVASFGAYLLSH--D--IIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHCS 115 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~--~--V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~lp~~~~sFDlI~~~ 115 (444)
.++|||||||+|.++..++++ + ++..|+ +..++.|++. ..++.+...|+...|.+ .+|+|+++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl------p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~ 251 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI------PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILA 251 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC------HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEE
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC------HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEee
Confidence 348999999999999999885 2 333333 3344444443 34678888887665554 47999999
Q ss_pred cccccccccH--HHHHHHHHhhcCCCeEEEEEcCCCCC--CChhhHH---------------HHHHHHHHHHhcCeEEEe
Q 013393 116 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA--HDPENRR---------------IWNAMYDLLKSMCWKIVS 176 (444)
Q Consensus 116 ~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~~~~--~~~~~~~---------------~~~~l~~l~~~~gf~~v~ 176 (444)
.+ +|..+|. ..+|+++++.|+|||++++.+.-... ..+.... ...++.++++++||+.+.
T Consensus 252 ~v-lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 252 RV-LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp SS-GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred ee-cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 95 5554555 47899999999999999997643211 1111111 124788999999999876
Q ss_pred ee
Q 013393 177 KK 178 (444)
Q Consensus 177 ~~ 178 (444)
..
T Consensus 331 v~ 332 (353)
T 4a6d_A 331 FK 332 (353)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 185
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.01 E-value=6.2e-10 Score=104.47 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=70.7
Q ss_pred eEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCccC-C-CCCCCccEEEecc
Q 013393 47 NVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRL-P-YPSRSFELAHCSR 116 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~l-p-~~~~sFDlI~~~~ 116 (444)
+|||||||+|..+..++++ .++++|+++..+..++..+ .+.+. ++.+...|..+. + +++++||+|++..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALF-REAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHH-HHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 8999999999999988862 5788888776665554333 33343 477877775543 2 3368999999764
Q ss_pred ccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 117 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
. ..+...+++++.++|||||++++...
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 2 35567899999999999999998543
No 186
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.00 E-value=1.6e-09 Score=104.70 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=67.8
Q ss_pred eEEEECCCcchHHHHHhhC-CceEEEcCcccchHHHHH-HH-HHcCCCcEEE--EecCccCCCCCCCccEEEeccccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQ-FA-LERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-~V~gvdis~~dis~a~i~-~a-~e~~~~~~~~--~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
+|||||||+|.++..+++. .|+|+|+++ +...+..+ .. ...+.++.+. ..|+..++ +++||+|+|..+ ++
T Consensus 77 ~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~--~~ 151 (265)
T 2oxt_A 77 RVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG--ES 151 (265)
T ss_dssp EEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC--CC
T ss_pred EEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc--cc
Confidence 8999999999999999884 799999998 42111000 00 0011256777 77887766 678999999763 33
Q ss_pred ccc----HH---HHHHHHHhhcCCCe--EEEEEcCC
Q 013393 122 LQR----DG---ILLLELDRLLRPGG--YFVYSSPE 148 (444)
Q Consensus 122 ~~d----~~---~~L~ei~rvLkPGG--~lvis~p~ 148 (444)
..+ .. .+|.++.++||||| .|++....
T Consensus 152 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 152 SPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 222 11 37899999999999 99986543
No 187
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.00 E-value=2.8e-09 Score=100.65 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=87.6
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+|||||||+|.++..+++. .|+++|+++..+..+..+. +..+. .+.+...|......+++.||+|+.....-
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~-~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg- 101 (230)
T 3lec_A 24 RLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV-SEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG- 101 (230)
T ss_dssp EEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-
T ss_pred EEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECchhhccccccccCEEEEeCCch-
Confidence 8999999999999999885 4778888877665555433 33343 47888888766555544799988654211
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.-...++.+..+.|+++|+|+++... ....+.+.+.+.||.++.+.
T Consensus 102 --~lI~~IL~~~~~~l~~~~~lIlqp~~----------~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 102 --RLIADILNNDIDKLQHVKTLVLQPNN----------REDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp --HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred --HHHHHHHHHHHHHhCcCCEEEEECCC----------ChHHHHHHHHHCCCEEEEEE
Confidence 23457899999999999999997532 14578888999999988775
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.99 E-value=5.5e-10 Score=103.14 Aligned_cols=96 Identities=10% Similarity=0.141 Sum_probs=70.8
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CCCCCCCccEEEeccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYPSRSFELAHCSRC 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp~~~~sFDlI~~~~~ 117 (444)
++|||+|||+|..+..+++. .++++|+++..+..+..... ..+. ++.+...|..+ ++..++ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 48999999999999999864 57788877766554443332 2232 46777888654 354456 999998642
Q ss_pred cccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
..+...+++++.++|||||++++...
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 35678899999999999999998653
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.99 E-value=4.4e-10 Score=104.84 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=71.1
Q ss_pred CeEEEECCCcchHHHHHhhC---------CceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccCC----CCCC
Q 013393 46 RNVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLP----YPSR 107 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---------~V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~lp----~~~~ 107 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+..... ..++.+...|..... ...+
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 38999999999999888762 57888888766655544333322 246788888877654 4567
Q ss_pred CccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 108 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 108 sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+||+|++... +++ ++.++.++|||||++++..+.
T Consensus 162 ~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGAS-ASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSB-BSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCc-hHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 8999999874 544 358889999999999997543
No 190
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=1.2e-09 Score=105.67 Aligned_cols=96 Identities=13% Similarity=0.058 Sum_probs=75.0
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+. +.++ .++.+...|+..++. .++||+|++...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~-~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p--- 195 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENI-KLNKLNNVIPILADNRDVEL-KDVADRVIMGYV--- 195 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHH-HHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC---
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCEEEEECChHHcCc-cCCceEEEECCc---
Confidence 38999999999999999873 6889988887776555433 3344 367888888877744 578999998763
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.+...++.++.+.|||||.++++...
T Consensus 196 --~~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 196 --HKTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --ccHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 25567899999999999999987654
No 191
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.99 E-value=3.1e-09 Score=101.19 Aligned_cols=118 Identities=12% Similarity=0.034 Sum_probs=86.3
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+|||||||+|.++..+++. .|+++|+++..+..+..+. +..+. .+.+...|......++.+||+|+.....-
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~-~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg- 101 (244)
T 3gnl_A 24 RIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV-RSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG- 101 (244)
T ss_dssp EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-
T ss_pred EEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEEecchhhccCccccccEEEEeCCch-
Confidence 8999999999999999885 4778888877665555433 33444 36788888666554444699988654211
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.-...++.+..+.|+++|+|+++... ..+.+.+.+.+.||.++.+.
T Consensus 102 --~lI~~IL~~~~~~L~~~~~lIlq~~~----------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 102 --TLIRTILEEGAAKLAGVTKLILQPNI----------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp --HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHHTEEEEEEE
T ss_pred --HHHHHHHHHHHHHhCCCCEEEEEcCC----------ChHHHHHHHHHCCCEEEEEE
Confidence 23457899999999999999997532 24578888999999987654
No 192
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.98 E-value=1e-09 Score=99.65 Aligned_cols=92 Identities=16% Similarity=0.105 Sum_probs=65.3
Q ss_pred CeEEEECCCcchHHHHHhhC-------------CceEEEcCcccchHHHHHHHHHcCCCcEEE-EecCccCC--------
Q 013393 46 RNVLDVGCGVASFGAYLLSH-------------DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP-------- 103 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-------------~V~gvdis~~dis~a~i~~a~e~~~~~~~~-~~d~~~lp-------- 103 (444)
.+|||+|||+|.++..+++. .|+++|+++... ..++.+. ..|....+
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHHHHh
Confidence 38999999999999998763 378888887421 1245666 66654432
Q ss_pred CCCCCccEEEeccc---cccccccH-------HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 104 YPSRSFELAHCSRC---RIDWLQRD-------GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 104 ~~~~sFDlI~~~~~---~l~~~~d~-------~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+++++||+|+|..+ ..++..+. ..+++++.++|||||.|++....
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 34568999998652 22333333 47899999999999999997643
No 193
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.98 E-value=9.1e-10 Score=102.39 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=70.7
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC-C-CC---CCCccEEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP---SRSFELAH 113 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l-p-~~---~~sFDlI~ 113 (444)
.+|||||||+|.++..+++. .++++|+++..+..++.... ..+. ++.+...|.... + ++ .++||+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE-RANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 48999999999999999875 47778777766554443332 2333 478888886442 2 11 26799999
Q ss_pred eccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 114 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 114 ~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+... ......++.++.++|||||++++....
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8652 345678999999999999999986554
No 194
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.97 E-value=1.2e-09 Score=103.89 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=75.3
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC-CCC-----CCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP-----SRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l-p~~-----~~sFDlI 112 (444)
++|||||||+|..+..+++. .|+++|+++..+..+..++. ..+. ++.+...|+... +.. +++||+|
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR-EAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH-HTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 48999999999999999872 68999999988766664443 3333 578888886553 221 4789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 113 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++... ..+...+++++.++|||||++++....
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 98652 356778999999999999999996543
No 195
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.96 E-value=2.9e-10 Score=121.31 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC-CCcEEEEecCccC--CCCCCCccEEEeccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRL--PYPSRSFELAHCSRCRI 119 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~-~~~~~~~~d~~~l--p~~~~sFDlI~~~~~~l 119 (444)
+.+|||||||.|.++..|++. .|+|+|+++..+..++. .|.+.+ .++.+.+.+++++ ++.+++||+|+|.. ++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-~~ 144 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA-LAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS-VF 144 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES-CH
T ss_pred CCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH-HHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc-ch
Confidence 348999999999999999985 57777776665544442 333444 5789999998887 46678999999999 58
Q ss_pred cccccHH--HHHHHHHhhcCCCeEEEEEc
Q 013393 120 DWLQRDG--ILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 120 ~~~~d~~--~~L~ei~rvLkPGG~lvis~ 146 (444)
+|++++. ..+..+.+.|+++|..++..
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 8888776 33556777788887666543
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.96 E-value=1.5e-09 Score=105.08 Aligned_cols=125 Identities=15% Similarity=0.126 Sum_probs=83.2
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCC----CCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY----PSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~----~~~sFDlI~~~ 115 (444)
.+|||+|||+|..+..+++ ..|+++|+++..+..+.. .++..+. ++.+...|...++. ++++||+|++.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 3899999999999998886 358888888766654443 3333344 67888888776653 25789999985
Q ss_pred c-c----ccc------------ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHh-cCeEEEe
Q 013393 116 R-C----RID------------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIVS 176 (444)
Q Consensus 116 ~-~----~l~------------~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~-~gf~~v~ 176 (444)
. | .++ .......++.++.++|||||++++++........+ ..+..++++ .+|+++.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene-----~~v~~~l~~~~~~~~~~ 237 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE-----EVIKYILQKRNDVELII 237 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH-----HHHHHHHHHCSSEEEEC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH-----HHHHHHHHhCCCcEEec
Confidence 2 1 111 11345689999999999999999987665432221 234444433 4565543
No 197
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.95 E-value=5.5e-10 Score=110.06 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=65.6
Q ss_pred eEEEECCCcchHHHHHhhC-CceEEEc----CcccchHHHHHHHHHcC-CCcEEEEe-cCccCCCCCCCccEEEecccc-
Q 013393 47 NVLDVGCGVASFGAYLLSH-DIIAMSL----APNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRCR- 118 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~-~V~gvdi----s~~dis~a~i~~a~e~~-~~~~~~~~-d~~~lp~~~~sFDlI~~~~~~- 118 (444)
+|||||||+|.++..++++ .|+++|+ ++.++.... ....+ ..+.+... |...++ .++||+|+|..+.
T Consensus 85 ~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 85 KVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGES 159 (305)
T ss_dssp EEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCC
T ss_pred EEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCC--cCCCCEEEECCccc
Confidence 8999999999999999885 6899998 342221100 01111 23566666 666554 5689999997532
Q ss_pred -ccccccHH---HHHHHHHhhcCCCeEEEEEcCC
Q 013393 119 -IDWLQRDG---ILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 119 -l~~~~d~~---~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.++..+.. .+|.++.++|||||.|++....
T Consensus 160 ~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 160 SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 22323332 5789999999999999986544
No 198
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.95 E-value=1.1e-09 Score=108.72 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=68.5
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHc-----------CCCcEEEEecCccC--CCCCC
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----------GIPSTLGVLGTKRL--PYPSR 107 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~-----------~~~~~~~~~d~~~l--p~~~~ 107 (444)
.+|||+|||+|.++..+++ ..|+++|+++..+..+..+..... ..++.+...|.... +++++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 3899999999999998876 357888888776655554433211 24678888887776 46677
Q ss_pred CccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 108 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 108 sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
+||+|++.. .+...++.++.++|||||++++..+.
T Consensus 187 ~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 187 TFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp -EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 899999864 22334899999999999999987654
No 199
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.95 E-value=2.6e-09 Score=110.69 Aligned_cols=125 Identities=20% Similarity=0.213 Sum_probs=83.8
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCC--CCCCCccEEEe---
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP--YPSRSFELAHC--- 114 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp--~~~~sFDlI~~--- 114 (444)
.+|||+|||+|..+..+++ ..++++|+++..+..+.. .+...+. ++.+...|...++ +++++||+|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD-FVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 3899999999999999886 357888777765544432 2233344 6788888877766 55578999996
Q ss_pred --ccccccccccH----------------HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CeEEE
Q 013393 115 --SRCRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 175 (444)
Q Consensus 115 --~~~~l~~~~d~----------------~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~-gf~~v 175 (444)
....++..++. ..++.++.++|||||++++++...... +. -..+..++++. +|+.+
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~--en---e~~v~~~l~~~~~~~~~ 414 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE--EN---EKNIRWFLNVHPEFKLV 414 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCSSCEEC
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh--hH---HHHHHHHHHhCCCCEEe
Confidence 22223322332 578999999999999999987654321 11 23455566654 67654
Q ss_pred e
Q 013393 176 S 176 (444)
Q Consensus 176 ~ 176 (444)
.
T Consensus 415 ~ 415 (450)
T 2yxl_A 415 P 415 (450)
T ss_dssp C
T ss_pred e
Confidence 3
No 200
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.94 E-value=6.5e-09 Score=97.86 Aligned_cols=117 Identities=13% Similarity=0.053 Sum_probs=84.6
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecC-ccCCCCCCCccEEEeccccc
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~-~~lp~~~~sFDlI~~~~~~l 119 (444)
+|||||||+|.++..+++. .|+++|+++..+..+.. .++..+. ++.+...|. ..++. ...||+|+.... .
T Consensus 18 ~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~-G 94 (225)
T 3kr9_A 18 ILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVK-NVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGM-G 94 (225)
T ss_dssp EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEE-C
T ss_pred EEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCC-C
Confidence 8999999999999999885 47788888766655553 3334454 467777775 33432 226999987552 1
Q ss_pred cccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 120 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 120 ~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
- .-...++.+..+.|+|+|+|+++... ....+.+.+.+.||.++.+.
T Consensus 95 g--~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 95 G--RLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp H--HHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred h--HHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEE
Confidence 1 22467899999999999999996442 24578888999999988764
No 201
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.94 E-value=6.9e-10 Score=103.26 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=71.0
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC-C-CC----CCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP----SRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l-p-~~----~~sFDlI 112 (444)
.+|||+|||+|..+..+++. .++++|+++..+..+.... ...+. ++.+...|.... + ++ .++||+|
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYW-EKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH-HHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 38999999999999999874 5778888776655544333 23333 378888876432 2 11 1789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 113 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++.. ...+...++.++.++|||||++++....
T Consensus 145 ~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 145 YIDA----DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EECC----CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9654 2356778999999999999999996544
No 202
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.93 E-value=2.5e-09 Score=97.98 Aligned_cols=112 Identities=12% Similarity=0.042 Sum_probs=75.7
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCC-----------CCCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-----------SRSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~-----------~~sFDlI 112 (444)
.+|||+|||+|.++..++++ .|+|+|+++... ..++.+...|+...+.. .++||+|
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~V 95 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEE
Confidence 38999999999999999875 689999987531 23678888887765421 1489999
Q ss_pred Eeccc---ccccccc-------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 113 HCSRC---RIDWLQR-------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 113 ~~~~~---~l~~~~d-------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
+|... ...+..+ ...++.++.++|||||.|++..... + ....+...++. .|..+..
T Consensus 96 lsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~----~----~~~~~~~~l~~-~F~~v~~ 161 (191)
T 3dou_A 96 VSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG----D----MTNDFIAIWRK-NFSSYKI 161 (191)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS----T----HHHHHHHHHGG-GEEEEEE
T ss_pred ecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC----C----CHHHHHHHHHH-hcCEEEE
Confidence 99641 0111111 2467899999999999999854321 1 13455556654 4655543
No 203
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.93 E-value=2.1e-09 Score=105.85 Aligned_cols=105 Identities=11% Similarity=0.082 Sum_probs=71.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH----cCCCcEEEEecCcc-CCCCCCCccEEEec
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHCS 115 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e----~~~~~~~~~~d~~~-lp~~~~sFDlI~~~ 115 (444)
+++|||||||+|.++..++++ .++++|+++..+..+...+... ...++.+...|... ++..+++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 358999999999999999875 4677777766554444332221 13567888888654 34456789999986
Q ss_pred cccccccc----cHHHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 116 RCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 116 ~~~l~~~~----d~~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
. ..++.+ ....+++++.++|||||.+++.....+
T Consensus 176 ~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 176 S-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp C-C-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred C-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 4 233221 124789999999999999999764433
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=2.1e-09 Score=112.28 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=71.3
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||||||+|.++..+++. .|+++|+++ ++..++ +.++..+ .++.+...|..+++++ ++||+|+|+.. ++
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~-~~ 235 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM-GY 235 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC-HH
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc-hH
Confidence 48999999999999998874 578888776 543332 3334444 3588888998887765 58999999763 44
Q ss_pred cc--ccHHHHHHHHHhhcCCCeEEEEE
Q 013393 121 WL--QRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 121 ~~--~d~~~~L~ei~rvLkPGG~lvis 145 (444)
+. ++....+.++.++|||||++++.
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 43 33456788999999999999863
No 205
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.92 E-value=2.1e-09 Score=105.39 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=71.6
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHH--H--cCCCcEEEEecCcc-CCCCCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL--E--RGIPSTLGVLGTKR-LPYPSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~--e--~~~~~~~~~~d~~~-lp~~~~sFDlI~~~~ 116 (444)
++|||||||+|.++..+++. .++++|+++..+..++..+.. . ...++.+...|... ++..+++||+|++..
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 171 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDS 171 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcC
Confidence 58999999999999999874 467787777655444433222 0 13467888888654 344467899999854
Q ss_pred ccccccc-----cHHHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 117 CRIDWLQ-----RDGILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 117 ~~l~~~~-----d~~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
. .++.. ....+++++.++|||||.+++...+++
T Consensus 172 ~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 172 T-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp -----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred C-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 1 22111 226899999999999999999865543
No 206
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.91 E-value=9.6e-10 Score=108.70 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=73.6
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH-c----CCCcEEEEecCcc-CCCCCCCccEEEe
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-R----GIPSTLGVLGTKR-LPYPSRSFELAHC 114 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e-~----~~~~~~~~~d~~~-lp~~~~sFDlI~~ 114 (444)
+++|||||||+|.++..+++. .++++|+++..+..++..+... . ..++.+...|... ++..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 358999999999999999875 4777877776554444333221 1 3467888888655 3444678999999
Q ss_pred ccccccc---cc--c--HHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 115 SRCRIDW---LQ--R--DGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 115 ~~~~l~~---~~--d--~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.. ..++ .+ . ...+++++.++|||||.+++....
T Consensus 158 d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 158 DL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 75 3443 11 1 368999999999999999997543
No 207
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.91 E-value=5.3e-09 Score=106.27 Aligned_cols=126 Identities=12% Similarity=0.072 Sum_probs=88.8
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCcc-CCC---CCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKR-LPY---PSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~-lp~---~~~sFDlI~~~ 115 (444)
.+|||+|||+|.++..++++ .|+++|+++.++..+..+. +.++. ++.+...|+.+ ++. ..++||+|++.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~-~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHF-EANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHH-HHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 38999999999999999873 5899999998876666443 44443 67888888655 221 24589999984
Q ss_pred cc--------cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 116 RC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 116 ~~--------~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
.- ......+...++.++.++|+|||+++++..+.... ....+..+.+.+++.|.+.+
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~---~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT---VSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC---HHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC---HHHHHHHHHHHHHHcCCcEE
Confidence 32 12223445578889999999999999987654321 12344566777888888743
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.91 E-value=9.8e-09 Score=103.72 Aligned_cols=127 Identities=11% Similarity=0.036 Sum_probs=87.5
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCcc-CCC-CCCCccEEEeccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR-LPY-PSRSFELAHCSRC 117 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~-lp~-~~~sFDlI~~~~~ 117 (444)
..+|||+| |+|.++..++.. .|+++|+++.++..+..+ +...+. ++.+...|... +|. .+++||+|+++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~-~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~- 249 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKA-ANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP- 249 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHH-HHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC-
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCEEEEEChhhhhchhhccCCccEEEECC-
Confidence 34899999 999999888763 578888877666555433 333344 68888889877 664 356899999986
Q ss_pred cccccccHHHHHHHHHhhcCCCeE-EEEEcCCCCCCChhhHHHHHHHHHHHH-hcCeEEEeeec
Q 013393 118 RIDWLQRDGILLLELDRLLRPGGY-FVYSSPEAYAHDPENRRIWNAMYDLLK-SMCWKIVSKKD 179 (444)
Q Consensus 118 ~l~~~~d~~~~L~ei~rvLkPGG~-lvis~p~~~~~~~~~~~~~~~l~~l~~-~~gf~~v~~~~ 179 (444)
.++.. ....++.++.++|||||. ++++... .+.....|..+.++++ +.||.......
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhhhh
Confidence 23332 357899999999999994 3554332 1122234567777777 88987655433
No 209
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.91 E-value=1.5e-09 Score=108.90 Aligned_cols=122 Identities=9% Similarity=0.023 Sum_probs=84.9
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||||||+|.++..++++ .++++|+ + .+++.+++ ..++.+...|+.. +++ +||+|+++. ++|+
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~v~~~~-vlh~ 263 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P-----QVVGNLTG-NENLNFVGGDMFK-SIP--SADAVLLKW-VLHD 263 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H-----HHHSSCCC-CSSEEEEECCTTT-CCC--CCSEEEEES-CGGG
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H-----HHHhhccc-CCCcEEEeCccCC-CCC--CceEEEEcc-cccC
Confidence 48999999999999999874 3455565 3 33333333 2347888888766 666 499999998 5777
Q ss_pred cccHH--HHHHHHHhhcCC---CeEEEEEcCCCCCCCh-----hhHH---------------HHHHHHHHHHhcCeEEEe
Q 013393 122 LQRDG--ILLLELDRLLRP---GGYFVYSSPEAYAHDP-----ENRR---------------IWNAMYDLLKSMCWKIVS 176 (444)
Q Consensus 122 ~~d~~--~~L~ei~rvLkP---GG~lvis~p~~~~~~~-----~~~~---------------~~~~l~~l~~~~gf~~v~ 176 (444)
.++.. .+|+++.++||| ||++++.+........ .... ...++.+++++.||+.+.
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 343 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYK 343 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeE
Confidence 67776 999999999999 9999997643211110 1000 123677888889987765
Q ss_pred ee
Q 013393 177 KK 178 (444)
Q Consensus 177 ~~ 178 (444)
..
T Consensus 344 ~~ 345 (358)
T 1zg3_A 344 IT 345 (358)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 210
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.91 E-value=3.9e-09 Score=106.80 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=72.9
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEecc--cc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSR--CR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~--~~ 118 (444)
++|||||||+|.++...+++ .|+++|.++ ++ ..+.+.++.++. .+.+...+.+++.+| ++||+|+|-. ..
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 38999999999999888874 589999886 34 334455666654 477888888888876 6799999832 12
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEE
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+.+-.....++....|.|||||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44434667889999999999999884
No 211
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.90 E-value=8.4e-09 Score=104.32 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=84.7
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 119 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l 119 (444)
.+|||+|||+|.++..++.. .++|+|+++.++..+..+ +...+. ++.+...|+..+++++++||+|+|+.-..
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n-~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN-ALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH-HHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 37999999999999998873 688998888777655533 334454 68899999999988888999999964211
Q ss_pred c------cccc-HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 120 D------WLQR-DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 120 ~------~~~d-~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
. ...+ ...++.++.++| ||.+++..+. ...+.+.+++.||+....
T Consensus 298 ~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 298 LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp ------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEE
T ss_pred cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEE
Confidence 1 1111 257889999999 5555554332 235667888899987654
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.90 E-value=9.5e-10 Score=108.83 Aligned_cols=100 Identities=14% Similarity=0.063 Sum_probs=67.4
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc---------CCCcEEEEecCcc-CCCCCCCcc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFE 110 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~---------~~~~~~~~~d~~~-lp~~~~sFD 110 (444)
+++|||||||+|..+..+++. .++++|+++ .+++.|+++ ..++.+...|... ++..+++||
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE-----MVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH-----HHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCce
Confidence 358999999999999999874 456665555 455555543 2356777777654 333467899
Q ss_pred EEEeccccccccccH----HHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 111 LAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 111 lI~~~~~~l~~~~d~----~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
+|++.. ..++.+.. ..+++++.++|+|||.+++.....+
T Consensus 184 ~Ii~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 184 VIITDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp EEEECC-C-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred EEEEcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 999865 23322221 5889999999999999999875544
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=2.3e-09 Score=104.00 Aligned_cols=121 Identities=11% Similarity=0.086 Sum_probs=80.3
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH----cCCCcEEEEecCcc-CCCCCCCccEEEec
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHCS 115 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e----~~~~~~~~~~d~~~-lp~~~~sFDlI~~~ 115 (444)
+++|||||||+|.++..+++. .++++|+++..+..++..+... ...++.+...|... ++..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 458999999999999999875 4677777765554444332221 12467888888655 34446789999986
Q ss_pred ccccccccc----HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhc
Q 013393 116 RCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 170 (444)
Q Consensus 116 ~~~l~~~~d----~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~ 170 (444)
.. .++.+. ...+++++.++|||||.+++...+++.. ......+.+.+++.
T Consensus 156 ~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 156 ST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT----PELITNVQRDVKEI 209 (275)
T ss_dssp CS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC----HHHHHHHHHHHHTT
T ss_pred CC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc----HHHHHHHHHHHHHh
Confidence 52 332111 2579999999999999999986554321 22344555555554
No 214
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.90 E-value=7e-10 Score=107.34 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCCeEEEECCCc--chHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC----CC--CCCcc
Q 013393 44 NIRNVLDVGCGV--ASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YP--SRSFE 110 (444)
Q Consensus 44 ~~~rVLDVGCGt--G~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp----~~--~~sFD 110 (444)
..++|||||||+ +.....+++ ..|+++|.++.++..++.........++.+...|+.+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 456899999997 333333332 468888887766644432222111124788888877642 11 34565
Q ss_pred -----EEEeccccccccccH---HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 111 -----LAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 111 -----lI~~~~~~l~~~~d~---~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
.|+++. ++||+++. ..+++++.+.|+|||+|+++...
T Consensus 158 ~~~p~av~~~a-vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 158 LTRPVALTVIA-IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TTSCCEEEEES-CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cCCcchHHhhh-hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 466655 79998874 58999999999999999998644
No 215
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.89 E-value=1.5e-09 Score=101.86 Aligned_cols=97 Identities=12% Similarity=0.173 Sum_probs=70.1
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC-CCC--CCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP--SRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l-p~~--~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+.... ...+. ++.+...|.... +.. +++||+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHV-KALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHH-HHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 38999999999999988863 5777777665554443222 22243 477777776653 332 57899999865
Q ss_pred ccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 117 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
. ..+...+++++.++|||||++++.+.
T Consensus 135 ~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 135 A----KGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp G----GSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred C----HHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3 24678999999999999999999753
No 216
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.88 E-value=3.2e-09 Score=103.39 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=71.0
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc---------CCCcEEEEecCccC-CCCCCCcc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL-PYPSRSFE 110 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~---------~~~~~~~~~d~~~l-p~~~~sFD 110 (444)
+++|||||||+|.++..+++. .++++|+++ .+++.|+++ ..++.+...|.... +..+++||
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE-----TVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCce
Confidence 358999999999999999874 456666555 444555543 24567888886542 22357899
Q ss_pred EEEecccccccccc--H--HHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 111 LAHCSRCRIDWLQR--D--GILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 111 lI~~~~~~l~~~~d--~--~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
+|++.. ..++.+. . ..+++++.++|||||.+++...+.+
T Consensus 154 ~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 154 VIIVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp EEEEEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred EEEEcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcc
Confidence 999854 2333222 1 5899999999999999999876544
No 217
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.87 E-value=1.8e-09 Score=107.04 Aligned_cols=100 Identities=15% Similarity=0.133 Sum_probs=70.1
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc---------CCCcEEEEecCcc-CCCCCCCcc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFE 110 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~---------~~~~~~~~~d~~~-lp~~~~sFD 110 (444)
+++|||||||+|.++..+++. .++++|+++. +++.|+++ ..++.+...|... ++..+++||
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~-----~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET-----VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH-----HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH-----HHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCce
Confidence 358999999999999999875 4666666554 44554443 2357788887654 333357899
Q ss_pred EEEecccccccc--ccH--HHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 111 LAHCSRCRIDWL--QRD--GILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 111 lI~~~~~~l~~~--~d~--~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
+|++... .++. ... ..+++++.++|||||++++...+.+
T Consensus 192 vIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 192 VIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp EEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred EEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 9998642 2221 111 6899999999999999999765543
No 218
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.87 E-value=2.4e-09 Score=104.10 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=69.0
Q ss_pred CCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHH-----------cCCCcEEEEecCcc-CCCCCCCc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE-----------RGIPSTLGVLGTKR-LPYPSRSF 109 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e-----------~~~~~~~~~~d~~~-lp~~~~sF 109 (444)
+++|||||||+|.++..+++. .++++|+++..+..+...+ .. ...++.+...|... ++. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 358999999999999999875 4677777665544433222 10 12456777777544 222 5789
Q ss_pred cEEEeccccccccc--c--HHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 110 ELAHCSRCRIDWLQ--R--DGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 110 DlI~~~~~~l~~~~--d--~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
|+|++... .++.. . ...+++++.++|+|||.+++....+
T Consensus 154 D~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 154 DVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp EEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred eEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99998652 22211 1 2578999999999999999975443
No 219
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.85 E-value=8.5e-09 Score=97.18 Aligned_cols=97 Identities=14% Similarity=0.195 Sum_probs=69.2
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CC--------------
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LP-------------- 103 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp-------------- 103 (444)
.+|||+|||+|.++..+++. .++++|+++..+..++... ...+. .+.+...|... ++
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW-KENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 38999999999999988763 5778877776554444322 22233 26777777543 22
Q ss_pred CCC--CCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 104 YPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 104 ~~~--~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
|++ ++||+|++... ..+...+++++.++|||||++++...
T Consensus 141 f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 333 78999998752 34567899999999999999999753
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.85 E-value=1.4e-08 Score=104.65 Aligned_cols=124 Identities=14% Similarity=0.124 Sum_probs=85.2
Q ss_pred CeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC--CCCCCccEEEec----
Q 013393 46 RNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHCS---- 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp--~~~~sFDlI~~~---- 115 (444)
.+|||+|||+|..+..+++ ..++++|+++..+..+.. .+...+.++.+...|...++ +++++||+|++.
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~-~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD-NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCS 326 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHH-HHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCC
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-HHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCC
Confidence 3899999999999999886 368999999877655543 34444667788888887765 556789999962
Q ss_pred c-ccccccccH----------------HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CeEEE
Q 013393 116 R-CRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 175 (444)
Q Consensus 116 ~-~~l~~~~d~----------------~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~-gf~~v 175 (444)
. ..++..++. ..++.++.++|||||++++++...... +. -..+..++++. +|+.+
T Consensus 327 g~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~--en---e~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE--EN---SLQIKAFLQRTADAELC 399 (429)
T ss_dssp CGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTCEEC
T ss_pred cccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--hH---HHHHHHHHHhCCCCEEe
Confidence 2 122222221 478999999999999999987654321 11 12444555443 56554
No 221
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.85 E-value=4.1e-09 Score=99.21 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=70.5
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc----CCCCC--CCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR----LPYPS--RSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~----lp~~~--~sFDlI 112 (444)
++|||+|||+|..+..+++. .++++|+++..+..+...+. +.+. ++.+...|... ++..+ ++||+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ-KAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 48999999999999999874 57788777765544443322 2233 46777777433 33333 789999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 113 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++... ..+...++.++.++|||||++++....
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 97652 356778999999999999999996543
No 222
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.84 E-value=5e-09 Score=99.49 Aligned_cols=99 Identities=11% Similarity=0.163 Sum_probs=63.0
Q ss_pred CCeEEEECCCcchHHHHHhh----CCceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC---CCC---CCCccEE
Q 013393 45 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL---PYP---SRSFELA 112 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~----~~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l---p~~---~~sFDlI 112 (444)
..+|||+|||+|.++..+++ ..++++|+++.++..+..+. ...+. ++.+...|.... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV-EQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 34899999999999888875 36888988887766555433 33343 378888886552 344 2689999
Q ss_pred Eecccccccc--------------ccHHHHHHHHHhhcCCCeEEEE
Q 013393 113 HCSRCRIDWL--------------QRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 113 ~~~~~~l~~~--------------~d~~~~L~ei~rvLkPGG~lvi 144 (444)
+|+....+.. .....++.++.++|||||.+.+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 9984222111 0112456788888888887765
No 223
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.84 E-value=1.3e-08 Score=98.94 Aligned_cols=152 Identities=11% Similarity=0.086 Sum_probs=99.1
Q ss_pred eeecCCCCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHH
Q 013393 7 KINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 7 ~~~fpg~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~ 83 (444)
.|.|.-.-+.|..+...-...+.+.+. +|. +|||+|||+|.++..++++ .|+++|++|..+..+..
T Consensus 98 ~~~~D~~k~~f~~~~~~er~ri~~~~~-------~g~---~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~- 166 (278)
T 3k6r_A 98 KYKLDVAKIMFSPANVKERVRMAKVAK-------PDE---LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE- 166 (278)
T ss_dssp EEEEETTTSCCCGGGHHHHHHHHHHCC-------TTC---EEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHH-
T ss_pred EEEEeccceEEcCCcHHHHHHHHHhcC-------CCC---EEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHH-
Confidence 444433456677777665556665553 333 8999999999999988763 58888888866644443
Q ss_pred HHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHH
Q 013393 84 FALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWN 161 (444)
Q Consensus 84 ~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~ 161 (444)
.++.++. .+.+...|...++. .+.||.|+++. . .....++..+.++|||||++.+.....-. ........
T Consensus 167 N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~--p---~~~~~~l~~a~~~lk~gG~ih~~~~~~e~--~~~~~~~e 238 (278)
T 3k6r_A 167 NIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY--V---VRTHEFIPKALSIAKDGAIIHYHNTVPEK--LMPREPFE 238 (278)
T ss_dssp HHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC--C---SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--GTTTTTHH
T ss_pred HHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECC--C---CcHHHHHHHHHHHcCCCCEEEEEeeeccc--ccchhHHH
Confidence 3444444 36677788777653 57899999764 2 22346788889999999998764321100 00112345
Q ss_pred HHHHHHHhcCeEEEee
Q 013393 162 AMYDLLKSMCWKIVSK 177 (444)
Q Consensus 162 ~l~~l~~~~gf~~v~~ 177 (444)
.+.++++..|+++...
T Consensus 239 ~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 239 TFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCcEEEE
Confidence 6778888999976544
No 224
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.83 E-value=3e-09 Score=101.44 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=71.5
Q ss_pred CCeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCcc-CCC------CCCCcc
Q 013393 45 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPY------PSRSFE 110 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~-lp~------~~~sFD 110 (444)
+++|||||||+|..+..+++ ..++++|+++..+..+...+ .+.+. ++.+...|..+ ++. ++++||
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVI-KKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 34899999999999998876 35888888887665554333 33343 46777777654 231 157899
Q ss_pred EEEeccccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 111 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 111 lI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
+|++... ..+...+++++.++|||||++++..
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9998652 3567789999999999999999864
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.83 E-value=1.9e-09 Score=106.47 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=69.2
Q ss_pred CeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc-----CCCcEEEEecCccC--CCCCCCccEEEe
Q 013393 46 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRL--PYPSRSFELAHC 114 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~-----~~~~~~~~~d~~~l--p~~~~sFDlI~~ 114 (444)
.+|||||||+|.++.++++. .++++|+ ++.+++.|++. ..++.+...|...+ .+++++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEi-----dp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVEL-----DAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEES-----CHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEEC-----CHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 38999999999999999872 3455554 45566666655 24578888886553 345688999998
Q ss_pred ccccccc-cc---cHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 115 SRCRIDW-LQ---RDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 115 ~~~~l~~-~~---d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
... .+. .+ ....+++++.++|||||+|++...
T Consensus 166 D~~-~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVF-AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCS-TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 642 221 11 126899999999999999998764
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.82 E-value=2.4e-08 Score=101.75 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=81.5
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC-CCCCCCccEEEecccccc--
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRID-- 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l-p~~~~sFDlI~~~~~~l~-- 120 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+ ++.++....+...|...+ +...+.||+|++..-.+.
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n-~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~ 294 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQA-ALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKR 294 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSS
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 38999999999999999874 478888888776555543 334466666777776553 222344999998642111
Q ss_pred ------ccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCe
Q 013393 121 ------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 172 (444)
Q Consensus 121 ------~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf 172 (444)
...+...++.++.++|||||++++++...... .......+.+.+.+.|.
T Consensus 295 ~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~---~~~f~~~v~~a~~~~g~ 349 (393)
T 4dmg_A 295 PEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR---LEDLLEVARRAAADLGR 349 (393)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC---HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC---HHHHHHHHHHHHHHhCC
Confidence 12345689999999999999999766554322 11222345566666664
No 227
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.81 E-value=6.3e-08 Score=88.64 Aligned_cols=118 Identities=9% Similarity=0.027 Sum_probs=79.5
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
.+|||+|||+|.++..+++. .++++|+++..+..+..+ +...+.++.+...|...++ ++||+|+++.. .+..
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN-LGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-FGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-TGGGTTSEEEEESCGGGCC---CCCSEEEECCC-CSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCEEEEECchHHcC---CCCCEEEEcCC-Cccc
Confidence 48999999999999999875 377787776554333322 2222447888888887764 48999999863 3332
Q ss_pred --ccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 123 --QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 123 --~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
.....+++++.++| ||.+++..+. ......+.+.+++.||++....
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLAK--------PEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEECC--------HHHHHHHHHHHHHTTEEEEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeCC--------cCCHHHHHHHHHHCCCeEEEEE
Confidence 23357899999998 6655543211 1234556778888999765443
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.81 E-value=2.2e-08 Score=91.44 Aligned_cols=108 Identities=10% Similarity=0.094 Sum_probs=73.6
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
.+|||+|||+|.++..+++. .++++|+++ .+++.++++..++.+...|...++ ++||+|+++.. +++.
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~~~~ 123 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAESVTAFDIDP-----DAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPP-FGSV 123 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBSEEEEEESCH-----HHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCC-C---
T ss_pred CEEEEEeCCccHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCC-chhc
Confidence 48999999999999999875 366776654 455666655447888899988765 68999999874 5554
Q ss_pred cc--HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEE
Q 013393 123 QR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 175 (444)
Q Consensus 123 ~d--~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v 175 (444)
.+ ...+++++.++| |+.+++..+ .....+.+.+++.| +..
T Consensus 124 ~~~~~~~~l~~~~~~~--g~~~~~~~~----------~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 124 VKHSDRAFIDKAFETS--MWIYSIGNA----------KARDFLRREFSARG-DVF 165 (200)
T ss_dssp ----CHHHHHHHHHHE--EEEEEEEEG----------GGHHHHHHHHHHHE-EEE
T ss_pred cCchhHHHHHHHHHhc--CcEEEEEcC----------chHHHHHHHHHHCC-CEE
Confidence 43 247899999999 554444322 12445677777777 443
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.80 E-value=1.2e-08 Score=97.48 Aligned_cols=128 Identities=10% Similarity=0.049 Sum_probs=87.1
Q ss_pred CCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 45 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
+.+|||||||+|-++..++.. .++++|+++.++.-... ++...+.+..+.+.|...-+ +.++||+|+++- ++|
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~-~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lk-ti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDE-ALTRLNVPHRTNVADLLEDR-LDEPADVTLLLK-TLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHH-HHHHTTCCEEEEECCTTTSC-CCSCCSEEEETT-CHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeeecccC-CCCCcchHHHHH-HHH
Confidence 558999999999999888653 68888888766644442 33444788888888865554 457899999888 688
Q ss_pred ccccHH--HHHHHHHhhcCCCeEEEEEcC-CCCCCChhhHHHH-HHHHHHHHhcCeEEEe
Q 013393 121 WLQRDG--ILLLELDRLLRPGGYFVYSSP-EAYAHDPENRRIW-NAMYDLLKSMCWKIVS 176 (444)
Q Consensus 121 ~~~d~~--~~L~ei~rvLkPGG~lvis~p-~~~~~~~~~~~~~-~~l~~l~~~~gf~~v~ 176 (444)
++++.+ ..+ ++...|+|+|.++-... +...+.+.-...+ ..+++.+.+.||....
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceee
Confidence 876664 455 99999999999885332 1222333222333 3667888888885443
No 230
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.80 E-value=7.6e-09 Score=99.67 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=66.4
Q ss_pred CCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHc---------CCCcEEEEecCccCCCCCCCccEEEec
Q 013393 45 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRLPYPSRSFELAHCS 115 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~---------~~~~~~~~~d~~~lp~~~~sFDlI~~~ 115 (444)
+++|||||||+|.++..+++.. ..+...|+++.+++.|++. ..++.+...|..... ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4589999999999999988752 2333444455555555443 235677777766554 789999986
Q ss_pred cccccccccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 116 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 116 ~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
. .++..+++++.++|||||.+++....+
T Consensus 147 ~------~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 147 Q------EPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp S------CCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred C------CChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 3 344469999999999999999975443
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.80 E-value=6.9e-09 Score=105.20 Aligned_cols=123 Identities=13% Similarity=0.079 Sum_probs=81.9
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCC----CCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY----PSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~----~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+. ..++. ++.+...|+..+.. .+++||+|++..-.
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~-~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENA-RLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHH-HHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 38999999999999999874 6778877776665554333 33343 47888888655421 25689999985311
Q ss_pred --------ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCe
Q 013393 119 --------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 172 (444)
Q Consensus 119 --------l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf 172 (444)
.....+...++.++.++|+|||++++++.+.... . ......+.+.+.+.|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~--~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-E--PLFYAMVAEAAQDAHR 348 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-H--HHHHHHHHHHHHHTTC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-H--HHHHHHHHHHHHHcCC
Confidence 1122455689999999999999999987654322 1 1122344556666663
No 232
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.80 E-value=1.4e-08 Score=94.50 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=70.9
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcC--CCcEEEEecCccC-C-CCC----CCccEE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL-P-YPS----RSFELA 112 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d~~~l-p-~~~----~sFDlI 112 (444)
++|||+|||+|.++..+++. .++++|+++..+..+...+ ...+ .++.+...|.... + +++ ++||+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLW-RQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 48999999999999999863 5788888887665554333 3333 3577877775432 1 111 689999
Q ss_pred EeccccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 113 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 113 ~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
++... ..+...+++++.++|||||++++...
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 98652 35567899999999999999999653
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.79 E-value=1.7e-08 Score=110.16 Aligned_cols=119 Identities=17% Similarity=0.143 Sum_probs=84.9
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCcc-CCCCCCCccEEEeccc-
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKR-LPYPSRSFELAHCSRC- 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~-lp~~~~sFDlI~~~~~- 117 (444)
++|||+|||+|.++.+++.. .|+++|+++..+..+..+.. .++. ++.+...|... ++...++||+|++..-
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~-~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR-LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 38999999999999998864 48889888877766654443 3343 47888888655 4444678999998542
Q ss_pred ---------cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEE
Q 013393 118 ---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 174 (444)
Q Consensus 118 ---------~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~ 174 (444)
......+...++.++.++|+|||+|+++......... .+.+++.|++.
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~~ 676 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLKA 676 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCce
Confidence 1233456678999999999999999998766332221 34556677763
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.79 E-value=2.2e-08 Score=101.92 Aligned_cols=123 Identities=10% Similarity=0.027 Sum_probs=84.5
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCccCCC----CCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPY----PSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~lp~----~~~sFDlI~~~ 115 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+ +...+. ++.+...|...+.. ..++||+|++.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n-~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQN-VELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 38999999999999999875 588888888766555533 334455 67888888655421 14689999986
Q ss_pred cc--------cccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCe
Q 013393 116 RC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 172 (444)
Q Consensus 116 ~~--------~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf 172 (444)
.- ......+...++.++.+.|+|||+++++..+..... ......+.+.+.+.|+
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS---DLFQKIIADAAIDAGR 362 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH---HHHHHHHHHHHHHHTC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH---HHHHHHHHHHHHHcCC
Confidence 31 112225567899999999999999999875543221 1223344556777774
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.78 E-value=6e-09 Score=108.18 Aligned_cols=126 Identities=21% Similarity=0.191 Sum_probs=83.2
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC-CCCCCccEEEe----c
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHC----S 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp-~~~~sFDlI~~----~ 115 (444)
.+|||+|||+|..+..+++. .|+++|+++..+..+.. .+...+..+.+...|...++ +.+++||+|++ +
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~-n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLE-NVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCS 181 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcC
Confidence 38999999999999998852 57888877766544443 33334555777777876665 34578999995 2
Q ss_pred c-cccccccc----------------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CeEEEee
Q 013393 116 R-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIVSK 177 (444)
Q Consensus 116 ~-~~l~~~~d----------------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~-gf~~v~~ 177 (444)
. .++...++ ...++.++.++|||||+|++++-..... +. -..+..++++. +|+++..
T Consensus 182 g~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e--En---e~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 182 GEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE--EN---EGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp CGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTEEEECC
T ss_pred CccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh--cC---HHHHHHHHHHCCCcEEEec
Confidence 1 11111111 1578999999999999999987554321 11 23455666665 5766543
No 236
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.78 E-value=2.2e-08 Score=97.80 Aligned_cols=114 Identities=12% Similarity=0.038 Sum_probs=77.9
Q ss_pred CCCCCCCCCeEEEECC------Ccch-HHHHHhh--CCceEEEcCcccchHHHHHHHHHcCCCcEE-EEecCccCCCCCC
Q 013393 38 KLNNGGNIRNVLDVGC------GVAS-FGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTL-GVLGTKRLPYPSR 107 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGC------GtG~-~a~~La~--~~V~gvdis~~dis~a~i~~a~e~~~~~~~-~~~d~~~lp~~~~ 107 (444)
.++++. +|||+|| |+|. .+..+.. ..|+|+|+++. + .++.+ ...|+..++++ +
T Consensus 60 ~l~~g~---~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~ 122 (290)
T 2xyq_A 60 AVPYNM---RVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-N 122 (290)
T ss_dssp CCCTTC---EEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-S
T ss_pred CCCCCC---EEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-C
Confidence 344554 8999999 4465 1222222 46899999986 1 25677 88998888765 6
Q ss_pred CccEEEeccccccc-----------cccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEe
Q 013393 108 SFELAHCSRCRIDW-----------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 176 (444)
Q Consensus 108 sFDlI~~~~~~l~~-----------~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~ 176 (444)
+||+|+|+.. .++ ......+++++.++|||||.|++....... ..++.+++++.||..+.
T Consensus 123 ~fD~Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 123 KWDLIISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWTAF 193 (290)
T ss_dssp CEEEEEECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEEEE
T ss_pred cccEEEEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcEEE
Confidence 8999998642 221 112347999999999999999996544211 23677888888887654
Q ss_pred e
Q 013393 177 K 177 (444)
Q Consensus 177 ~ 177 (444)
.
T Consensus 194 ~ 194 (290)
T 2xyq_A 194 V 194 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.78 E-value=1.7e-08 Score=105.38 Aligned_cols=104 Identities=19% Similarity=0.183 Sum_probs=72.8
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCC-CCCCccEEEec---
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY-PSRSFELAHCS--- 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~-~~~sFDlI~~~--- 115 (444)
.+|||+|||+|..+.++++ ..|+++|+++..+..+..+. +..+. ++.+...|...++. .+++||.|++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~-~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANI-SRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHH-HHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 3899999999999999886 25788887776655444333 22344 67788888777653 45789999972
Q ss_pred -c-cccccccc----------------HHHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 116 -R-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 116 -~-~~l~~~~d----------------~~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
. ..+...++ ...+|.++.++|||||++++++-...
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 1 11211111 24689999999999999999876654
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.76 E-value=1.7e-08 Score=102.68 Aligned_cols=124 Identities=14% Similarity=0.030 Sum_probs=84.3
Q ss_pred CeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCC----CCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY----PSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~----~~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++. .|+++|+++..+..+..+ +...+. ++.+...|...+.. .+++||+|++..
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n-~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKEN-AKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 48999999999999999875 588898888776555543 333444 57888888655421 256899999853
Q ss_pred cc--------ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeE
Q 013393 117 CR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 173 (444)
Q Consensus 117 ~~--------l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~ 173 (444)
-. .+...+...++.++.++|+|||++++++...... . ......+.+.+.+.+..
T Consensus 298 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-~--~~~~~~v~~~~~~~~~~ 359 (396)
T 2as0_A 298 PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD-L--QMFKDMIIAAGAKAGKF 359 (396)
T ss_dssp CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC-H--HHHHHHHHHHHHHTTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC-H--HHHHHHHHHHHHHcCCe
Confidence 11 1122456689999999999999999887654322 1 11223445566666654
No 239
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.75 E-value=1.2e-08 Score=99.24 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=68.4
Q ss_pred eEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCc---cEEEecccc
Q 013393 47 NVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSF---ELAHCSRCR 118 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sF---DlI~~~~~~ 118 (444)
+|||+|||+|.++..+++. .|+++|+++..+..+..+ +...+. ++.+...|.... ++ ++| |+|+|+.-.
T Consensus 126 ~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n-~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKN-AERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPPY 202 (284)
T ss_dssp EEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHH-HHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCCC
T ss_pred EEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCCC
Confidence 8999999999999998864 678888877666555433 333344 378888887652 22 578 999997211
Q ss_pred cc----------ccc--------cHHHHHHHHH-hhcCCCeEEEEEcC
Q 013393 119 ID----------WLQ--------RDGILLLELD-RLLRPGGYFVYSSP 147 (444)
Q Consensus 119 l~----------~~~--------d~~~~L~ei~-rvLkPGG~lvis~p 147 (444)
+. |.+ +...+++++. +.|+|||++++...
T Consensus 203 i~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 203 VKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp BCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 10 211 1227899999 99999999998644
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.74 E-value=4.6e-08 Score=97.45 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=70.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccCCCCCCCccEEEeccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 121 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~ 121 (444)
.+|||+|||+|.++.. ++. .|+++|+++..+..++.+ ++.++. ++.+...|...+. ++||+|++.. ..+
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n-~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dp--P~~ 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKN-IKLNKLEHKIIPILSDVREVD---VKGNRVIMNL--PKF 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCGGGCC---CCEEEEEECC--TTT
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECChHHhc---CCCcEEEECC--cHh
Confidence 3899999999999999 763 578888888766555533 333443 5788888877765 7899999863 111
Q ss_pred cccHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 122 LQRDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 122 ~~d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
...++.++.++|+|||++++.+..
T Consensus 270 ---~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 270 ---AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp ---GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 237899999999999999986544
No 241
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.72 E-value=1.5e-08 Score=105.07 Aligned_cols=126 Identities=14% Similarity=0.111 Sum_probs=83.7
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCC-CCCCCccEEEecc-c
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP-YPSRSFELAHCSR-C 117 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp-~~~~sFDlI~~~~-~ 117 (444)
.+|||+|||+|..+.++++. .|+++|+++..+..+..+.. ..+. ++.+...|...++ +.+++||+|++.- |
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~-r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIE-RWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHH-HHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 38999999999999888762 57888887766554443333 3343 5677777766654 2357899999732 1
Q ss_pred ----ccccccc----------------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 118 ----RIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 118 ----~l~~~~d----------------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
++...++ ...+|.++.++|||||++++++-..... + .-..+..++++.+|+++..
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e--E---ne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE--E---NEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG--G---THHHHHHHHHHSSEEEECC
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc--c---CHHHHHHHHHhCCCEEEec
Confidence 1111111 1278999999999999999987554321 1 1235677788888776654
No 242
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.71 E-value=1.2e-08 Score=96.51 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=69.7
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC--CcEEEEecCccC-C-C-----CCCCccE
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-Y-----PSRSFEL 111 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~--~~~~~~~d~~~l-p-~-----~~~sFDl 111 (444)
++|||||||+|..+..+++ ..++++|+++..+..+...+ .+.+. ++.+...|..+. + + ++++||+
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFI-RKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 4899999999999998875 35788888776554444332 23344 467777775442 2 1 2578999
Q ss_pred EEeccccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 112 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 112 I~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
|++.. ...+...+++++.++|||||++++..
T Consensus 151 I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99764 23567789999999999999999864
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.71 E-value=2.2e-08 Score=94.83 Aligned_cols=131 Identities=16% Similarity=0.076 Sum_probs=83.0
Q ss_pred CCCeEEEECCCcchHHHHHhh-CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccccc
Q 013393 44 NIRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 122 (444)
Q Consensus 44 ~~~rVLDVGCGtG~~a~~La~-~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~ 122 (444)
.+.+|||||||+|.++..+.. ..++++|+++.++.-+.. .+...+.+..+.+.|....+.+ ++||+|++.- ++|++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk-~lh~L 181 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREKDWDFTFALQDVLCAPPA-EAGDLALIFK-LLPLL 181 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHTTCEEEEEECCTTTSCCC-CBCSEEEEES-CHHHH
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeecccCCCC-CCcchHHHHH-HHHHh
Confidence 355999999999999988763 478888888776644443 3444478888999998777765 5899999887 57776
Q ss_pred ccHH-HHHHHHHhhcCCCeEEEEEcC-CCCCCChhhHHHH-HHHHHHHHhcCeEEEee
Q 013393 123 QRDG-ILLLELDRLLRPGGYFVYSSP-EAYAHDPENRRIW-NAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 123 ~d~~-~~L~ei~rvLkPGG~lvis~p-~~~~~~~~~~~~~-~~l~~l~~~~gf~~v~~ 177 (444)
++.+ ....++.+.|+++|.++-... ....+.+.-...+ ..+++.+.+..|.+...
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhhe
Confidence 5543 233388889999987764221 2222222222222 24556666666644433
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.68 E-value=4.7e-08 Score=97.51 Aligned_cols=120 Identities=13% Similarity=0.180 Sum_probs=81.2
Q ss_pred CeEEEECCCcchHHHHHhh---------CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLS---------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~---------~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..+++ ..++|+|+++..+..+..+.. ..+.++.+...|.... .+.++||+|+++.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~~-~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLAN-LLVDPVDVVISDL 209 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTSC-CCCCCEEEEEEEC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCCc-cccCCccEEEECC
Confidence 4899999999999887764 246777777665544443332 2356778888886543 3457899999986
Q ss_pred ccccccccH------------------HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCe
Q 013393 117 CRIDWLQRD------------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 172 (444)
Q Consensus 117 ~~l~~~~d~------------------~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf 172 (444)
- +.+.+.. ..++.++.+.|||||++++..|........ ...+.+.+.+.++
T Consensus 210 P-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 210 P-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp C-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred C-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 3 3332211 258999999999999999988765322222 3566666666666
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.67 E-value=3.5e-07 Score=94.20 Aligned_cols=117 Identities=17% Similarity=0.190 Sum_probs=78.3
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCcc----CCCCCCCccEEEecccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR----LPYPSRSFELAHCSRCR 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~----lp~~~~sFDlI~~~~~~ 118 (444)
.+|||+|||+|.++..+++. .|+|+|+++.++..+..+ +...+. ++.+...|... +++++++||+|++..-
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n-~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPP- 365 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQN-ARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPA- 365 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCC-
T ss_pred CEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHH-HHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCC-
Confidence 38999999999999999975 688888888776555533 333443 68888888766 3455678999998642
Q ss_pred ccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 119 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 119 l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
... ...+++.+. .++|++.++++..+ .....-...+.+.||++...
T Consensus 366 --r~g-~~~~~~~l~-~~~p~~ivyvsc~p---------~tlard~~~l~~~Gy~~~~~ 411 (433)
T 1uwv_A 366 --RAG-AAGVMQQII-KLEPIRIVYVSCNP---------ATLARDSEALLKAGYTIARL 411 (433)
T ss_dssp --TTC-CHHHHHHHH-HHCCSEEEEEESCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred --Ccc-HHHHHHHHH-hcCCCeEEEEECCh---------HHHHhhHHHHHHCCcEEEEE
Confidence 211 124555554 47999999987433 11222234445568987654
No 246
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.67 E-value=6.1e-08 Score=94.32 Aligned_cols=109 Identities=19% Similarity=0.173 Sum_probs=69.2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcC--CCcEEEEec
Q 013393 23 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLG 98 (444)
Q Consensus 23 ~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~--~~~~~~~~d 98 (444)
...+.+.+.+.. .+ ..+|||||||+|.++..+++. .|+++|+++.++..+..+. ...+ .++.+...|
T Consensus 15 ~i~~~i~~~~~~-----~~---~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 15 LIINSIIDKAAL-----RP---TDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGD 85 (285)
T ss_dssp HHHHHHHHHTCC-----CT---TCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESC
T ss_pred HHHHHHHHhcCC-----CC---CCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcc
Confidence 344555555543 22 338999999999999999874 5778877765553333222 1112 357888889
Q ss_pred CccCCCCCCCccEEEeccccccccccHH-HHH--------------HHH--HhhcCCCeEEE
Q 013393 99 TKRLPYPSRSFELAHCSRCRIDWLQRDG-ILL--------------LEL--DRLLRPGGYFV 143 (444)
Q Consensus 99 ~~~lp~~~~sFDlI~~~~~~l~~~~d~~-~~L--------------~ei--~rvLkPGG~lv 143 (444)
+..++++ +||+|+++. ..++..+.- .++ +|+ .++|+|||.++
T Consensus 86 ~~~~~~~--~fD~vv~nl-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANL-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TTTSCCC--CCSEEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred eecccch--hhcEEEEec-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 8887765 799999975 344432221 222 233 36899999874
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.61 E-value=2e-07 Score=94.94 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=80.0
Q ss_pred CeEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc
Q 013393 46 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 120 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~ 120 (444)
.+|||+|||+|.++..+++ ..++|+|+++..+..+ .++.+...|....+. .++||+|+++--...
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP-GEAFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC-SSCEEEEEECCCCCC
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc-cCCCCEEEECcCccC
Confidence 3899999999999999886 3688999988766433 457788888776653 468999999621111
Q ss_pred c---------c-cc------------------HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCe
Q 013393 121 W---------L-QR------------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 172 (444)
Q Consensus 121 ~---------~-~d------------------~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf 172 (444)
. . ++ ...++..+.++|+|||++++..|..+.... ....+.+.+.+.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~----~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE----DFALLREFLAREGK 186 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG----GGHHHHHHHHHHSE
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc----cHHHHHHHHHhcCC
Confidence 0 0 11 125789999999999999998877533222 23467777777777
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.59 E-value=1.4e-07 Score=92.38 Aligned_cols=69 Identities=17% Similarity=0.301 Sum_probs=47.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..++++ .|+++|+++.++..+..+.......++.+...|+..++++ +||+|+|+.
T Consensus 44 ~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANI 114 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEEC
T ss_pred CEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcC
Confidence 38999999999999999885 5778877776654444333221124678888888877754 799999875
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.56 E-value=4.9e-07 Score=92.96 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=68.1
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEeccccccccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 123 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~ 123 (444)
.+|||+|||+|.++..+++. .|+|+|+++.++..+..+ +...+.++.+...|+.++.. .+||+|++..- ...
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n-~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPP---r~g 365 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRN-VEINNVDAEFEVASDREVSV--KGFDTVIVDPP---RAG 365 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCEEEEECCTTTCCC--TTCSEEEECCC---TTC
T ss_pred CEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChHHcCc--cCCCEEEEcCC---ccc
Confidence 38999999999999999885 688888888777665543 33345558888888877643 28999998642 111
Q ss_pred cHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 124 RDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 124 d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
-...+++.+. .|+|||.++++..
T Consensus 366 ~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 366 LHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp SCHHHHHHHH-HHCCSEEEEEESC
T ss_pred hHHHHHHHHH-hcCCCcEEEEECC
Confidence 1234555554 5999999999753
No 250
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.47 E-value=1.1e-06 Score=84.39 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=63.7
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecccccc--
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID-- 120 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~-- 120 (444)
+|||+|||+|.|+.++++. .+.++++. .|+....+.. ...+.++.....+++...+++++||+|+|..+ .+
T Consensus 77 ~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a-pnsG 153 (277)
T 3evf_A 77 RVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG-ESSS 153 (277)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CCCS
T ss_pred EEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecCc-cCcC
Confidence 8999999999999988764 35566665 2321110000 00122444445555555677789999999762 33
Q ss_pred --ccccHH--HHHHHHHhhcCCC-eEEEEEcCCC
Q 013393 121 --WLQRDG--ILLLELDRLLRPG-GYFVYSSPEA 149 (444)
Q Consensus 121 --~~~d~~--~~L~ei~rvLkPG-G~lvis~p~~ 149 (444)
+.+... .+|..+.++|+|| |.|++..-.+
T Consensus 154 ~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 154 SSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 332222 3578889999999 9999965543
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.44 E-value=2.3e-09 Score=101.84 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=65.6
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCC-CCccEEEecccc----
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-RSFELAHCSRCR---- 118 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~-~sFDlI~~~~~~---- 118 (444)
.+|||+|||+|.++..+++. .++|+|+++.++..+..+.. ...++.+...|...+++++ ++| .|+++.-.
T Consensus 31 ~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 31 DTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp EEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCH
T ss_pred CEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccCCCc-EEEEeCCccccH
Confidence 38999999999999999874 67888888776543322111 1235778888888888774 689 67765310
Q ss_pred ------ccccccHHHHH----HHHHhhcCCCeEEEEEcC
Q 013393 119 ------IDWLQRDGILL----LELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 119 ------l~~~~d~~~~L----~ei~rvLkPGG~lvis~p 147 (444)
+.+..+...++ +.+.|+|+|||.+.+..+
T Consensus 108 ~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 108 QIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 00111222334 668999999998887543
No 252
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.44 E-value=4.8e-07 Score=91.32 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=68.2
Q ss_pred CCeEEEECCCcchHHHHHhh-------------------CCceEEEcCcccchHHHHHHHHH----------c--CCCcE
Q 013393 45 IRNVLDVGCGVASFGAYLLS-------------------HDIIAMSLAPNDVHENQIQFALE----------R--GIPST 93 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~-------------------~~V~gvdis~~dis~a~i~~a~e----------~--~~~~~ 93 (444)
.-+|+|+|||+|..+..+++ -.|...|+...|...-....+.. . +.+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 35899999999988777632 13556677777754433222210 0 00112
Q ss_pred EE--Eec-CccCCCCCCCccEEEeccccccccc--------------------------------------cHHHHHHHH
Q 013393 94 LG--VLG-TKRLPYPSRSFELAHCSRCRIDWLQ--------------------------------------RDGILLLEL 132 (444)
Q Consensus 94 ~~--~~d-~~~lp~~~~sFDlI~~~~~~l~~~~--------------------------------------d~~~~L~ei 132 (444)
|. +.. ...-.||+++||+|+|+. .+||+. |...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 222 333458899999999999 599975 455678999
Q ss_pred HhhcCCCeEEEEEcC
Q 013393 133 DRLLRPGGYFVYSSP 147 (444)
Q Consensus 133 ~rvLkPGG~lvis~p 147 (444)
++.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999754
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.43 E-value=5.5e-07 Score=93.04 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=71.4
Q ss_pred CeEEEECCCcchHHHHHhh-----------------CCceEEEcCcccchHHHHHHHHHcCC---CcEEEEecCccCCCC
Q 013393 46 RNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPYP 105 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~-----------------~~V~gvdis~~dis~a~i~~a~e~~~---~~~~~~~d~~~lp~~ 105 (444)
.+|||.|||+|.+...+++ ..++|+|+++..+..+..+... .+. +..+...|+...+..
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l-~g~~~~~~~i~~gD~l~~~~~ 251 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL-HGIGTDRSPIVCEDSLEKEPS 251 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH-TTCCSSCCSEEECCTTTSCCS
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH-hCCCcCCCCEeeCCCCCCccc
Confidence 3799999999998877653 4688998888666555543332 344 567788887666543
Q ss_pred CCCccEEEeccccccc--cc--------------cHHHHHHHHHhhcCCCeEEEEEcCC
Q 013393 106 SRSFELAHCSRCRIDW--LQ--------------RDGILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~--~~--------------d~~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++||+|+++.-.... .. ....++..+.+.|||||++++..|.
T Consensus 252 -~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 252 -TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp -SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred -CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 489999997421111 10 0137899999999999999988765
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.39 E-value=8.9e-07 Score=86.65 Aligned_cols=92 Identities=9% Similarity=0.037 Sum_probs=65.9
Q ss_pred CccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhh--CCceEEEcCcccchHHHHHHHHHcCCC
Q 013393 14 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIP 91 (444)
Q Consensus 14 gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~--~~V~gvdis~~dis~a~i~~a~e~~~~ 91 (444)
|.+|-.. ....+.+.+.+.. .++ .+|||||||+|.++..|++ ..|+++|+++.++..+..+.. ...+
T Consensus 29 GQnfL~d-~~i~~~Iv~~l~~-----~~~---~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~ 97 (295)
T 3gru_A 29 GQCFLID-KNFVNKAVESANL-----TKD---DVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNN 97 (295)
T ss_dssp -CCEECC-HHHHHHHHHHTTC-----CTT---CEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSS
T ss_pred CccccCC-HHHHHHHHHhcCC-----CCc---CEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCC
Confidence 4444433 2344555555543 233 3899999999999999987 368999999987766554433 3457
Q ss_pred cEEEEecCccCCCCCCCccEEEecc
Q 013393 92 STLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 92 ~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
+.+...|+..+++++.+||.|+++.
T Consensus 98 v~vi~gD~l~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 98 IEIIWGDALKVDLNKLDFNKVVANL 122 (295)
T ss_dssp EEEEESCTTTSCGGGSCCSEEEEEC
T ss_pred eEEEECchhhCCcccCCccEEEEeC
Confidence 8899999999888877899999875
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.37 E-value=1.9e-07 Score=93.44 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=67.2
Q ss_pred CCCeEEEECCCcchHHHHHhhCC---ceEEEcCcccchHHHHHHHHHcCC-------------CcEEEEecCccCCC---
Q 013393 44 NIRNVLDVGCGVASFGAYLLSHD---IIAMSLAPNDVHENQIQFALERGI-------------PSTLGVLGTKRLPY--- 104 (444)
Q Consensus 44 ~~~rVLDVGCGtG~~a~~La~~~---V~gvdis~~dis~a~i~~a~e~~~-------------~~~~~~~d~~~lp~--- 104 (444)
++++|||||||+|.++..++++. |+.+|++ +..++.|++.-. ++.+...|.....-
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID-----~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID-----QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC-----HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECC-----HHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh
Confidence 56799999999999999998753 4555544 555566655421 46777788554321
Q ss_pred -CCCCccEEEecccccccc--c---cHHHHHHHH----HhhcCCCeEEEEEcCCC
Q 013393 105 -PSRSFELAHCSRCRIDWL--Q---RDGILLLEL----DRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 105 -~~~sFDlI~~~~~~l~~~--~---d~~~~L~ei----~rvLkPGG~lvis~p~~ 149 (444)
++++||+|++...-.+.. + ....+++++ .++|+|||.+++...+.
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 357899999864211211 1 124566666 89999999999875443
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.31 E-value=3.8e-06 Score=82.70 Aligned_cols=101 Identities=13% Similarity=0.011 Sum_probs=67.1
Q ss_pred eEEEECCCcchHHHHHhh-----CCceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCCCCC---CCccEEEec--
Q 013393 47 NVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPS---RSFELAHCS-- 115 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~-----~~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp~~~---~sFDlI~~~-- 115 (444)
+|||+|||+|..+.++++ ..|+++|+++..+.....+ ++..+. ++.+...|...++... ++||.|++.
T Consensus 105 ~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n-~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 105 HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATL-LARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPS 183 (309)
T ss_dssp EEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCC
T ss_pred EEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCC
Confidence 899999999999998876 3588898887666554433 333343 6788888877765432 579999972
Q ss_pred --c-ccccccc-----------cH-------HHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 116 --R-CRIDWLQ-----------RD-------GILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 116 --~-~~l~~~~-----------d~-------~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
. ..+...+ +. ..+|..+.++|+ ||++++++-..
T Consensus 184 cSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 184 CSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 1 1111111 11 246778888887 99999876554
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.28 E-value=1.3e-06 Score=83.02 Aligned_cols=65 Identities=12% Similarity=0.196 Sum_probs=46.4
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc---CCCcEEEEecCccCCCCC-CCccEEEecc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLPYPS-RSFELAHCSR 116 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~---~~~~~~~~~d~~~lp~~~-~sFDlI~~~~ 116 (444)
.+|||+|||+|.++..++++ .++++|+++ .+++.++++ ..++.+...|+..+++++ ..| .|+++.
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nl 102 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRCNFVTAIEIDH-----KLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNI 102 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEECSCH-----HHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEEC
T ss_pred CEEEEEeCCchHHHHHHHHcCCeEEEEECCH-----HHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeC
Confidence 48999999999999999874 566666655 444555444 246788899998888874 455 455553
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.20 E-value=8.3e-06 Score=82.91 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=70.0
Q ss_pred CeEEEECCCcchHHHHHhh--C----------------------------------------CceEEEcCcccchHHHHH
Q 013393 46 RNVLDVGCGVASFGAYLLS--H----------------------------------------DIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~--~----------------------------------------~V~gvdis~~dis~a~i~ 83 (444)
.+|||.+||+|.++..++. . .|+|+|+++.++..+..+
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~N 282 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQN 282 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHH
Confidence 3799999999998877654 1 288888888777665543
Q ss_pred HHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccccc---ccHHHHHHHHHhhcCC--CeEEEEEcCC
Q 013393 84 FALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 148 (444)
Q Consensus 84 ~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~---~d~~~~L~ei~rvLkP--GG~lvis~p~ 148 (444)
+...+. .+.+...|+.+++.+ .+||+|+|+.-..... .+...+.+++.+.||+ ||.+++.++.
T Consensus 283 -a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 283 -AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp -HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred -HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 333444 478999999888765 5899999984211111 2334567777777766 8888876554
No 259
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.20 E-value=2.5e-06 Score=91.44 Aligned_cols=119 Identities=13% Similarity=0.098 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHH---HHhhC-----CceEEEcCcccchHHHHHHHHHc--CC
Q 013393 21 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGA---YLLSH-----DIIAMSLAPNDVHENQIQFALER--GI 90 (444)
Q Consensus 21 ~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~---~La~~-----~V~gvdis~~dis~a~i~~a~e~--~~ 90 (444)
++.|.+.+.+.+.-....-.+..+...|||||||+|.+.. ..+++ +|++++-++...... +..+++ +.
T Consensus 334 y~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~--~~v~~N~~~d 411 (637)
T 4gqb_A 334 YSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL--ENWQFEEWGS 411 (637)
T ss_dssp HHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH--HHHHHHTTGG
T ss_pred HHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH--HHHHhccCCC
Confidence 4566666665553211122223344579999999997743 33332 578888887543322 233333 44
Q ss_pred CcEEEEecCccCCCCCCCccEEEecccccccc--ccHHHHHHHHHhhcCCCeEEE
Q 013393 91 PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL--QRDGILLLELDRLLRPGGYFV 143 (444)
Q Consensus 91 ~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~--~d~~~~L~ei~rvLkPGG~lv 143 (444)
.+.+...|++++..| +++|+|+|=- +..+. +.....+....|.|||||.++
T Consensus 412 kVtVI~gd~eev~LP-EKVDIIVSEw-MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 412 QVTVVSSDMREWVAP-EKADIIVSEL-LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp GEEEEESCTTTCCCS-SCEEEEECCC-CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred eEEEEeCcceeccCC-cccCEEEEEc-CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 678888899988776 6799999732 11111 223367778899999999876
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.20 E-value=5.6e-06 Score=83.94 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=71.4
Q ss_pred CeEEEECCCcchHHHHHhh------------------------------------------CCceEEEcCcccchHHHHH
Q 013393 46 RNVLDVGCGVASFGAYLLS------------------------------------------HDIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~------------------------------------------~~V~gvdis~~dis~a~i~ 83 (444)
.+|||++||+|.++..++. ..|+|+|+++.++..+..+
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~N 276 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAREN 276 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHH
Confidence 3799999999998887754 2478888888777655543
Q ss_pred HHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccccc---ccHHHHHHHHHhhcCC--CeEEEEEcCC
Q 013393 84 FALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 148 (444)
Q Consensus 84 ~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~---~d~~~~L~ei~rvLkP--GG~lvis~p~ 148 (444)
+...+. .+.+...|+.+++.+ ++||+|+|+.-..... .+...+++++.++||+ ||.+.+.++.
T Consensus 277 -a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 277 -AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp -HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred -HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 333454 578889998888765 5899999975322222 2344677777778877 8888776554
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.16 E-value=2.1e-06 Score=86.51 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=65.1
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC-CcEEEEecCccCC--CCC--------------
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP--YPS-------------- 106 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~d~~~lp--~~~-------------- 106 (444)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+ ++.++. ++.+...|+.++. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n-~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYN-IAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHH-HHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 37999999999999999874 688998888777665543 334443 6788888865531 111
Q ss_pred CCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcC
Q 013393 107 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 107 ~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p 147 (444)
.+||+|++..- . ..+..++.+.|+|+|.+++.+-
T Consensus 294 ~~fD~Vv~dPP---r----~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 294 YQCETIFVDPP---R----SGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CCEEEEEECCC---T----TCCCHHHHHHHTTSSEEEEEES
T ss_pred CCCCEEEECcC---c----cccHHHHHHHHhCCCEEEEEEC
Confidence 37999987531 1 1234567777788888887643
No 262
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.15 E-value=4.4e-06 Score=84.45 Aligned_cols=103 Identities=20% Similarity=0.171 Sum_probs=65.5
Q ss_pred CCeEEEECCCcchHHHHHhhC---------------------CceEEEcCcccchHHH------HHHH-HHcC--CCcEE
Q 013393 45 IRNVLDVGCGVASFGAYLLSH---------------------DIIAMSLAPNDVHENQ------IQFA-LERG--IPSTL 94 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~---------------------~V~gvdis~~dis~a~------i~~a-~e~~--~~~~~ 94 (444)
.-+|+|+||++|..+..+.+. .|...|+...|...-. .+.. .+.+ .+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 447999999999877766541 1334555555543221 1111 2222 23344
Q ss_pred EEec---CccCCCCCCCccEEEeccccccccccHH---------------------------------------HHHHHH
Q 013393 95 GVLG---TKRLPYPSRSFELAHCSRCRIDWLQRDG---------------------------------------ILLLEL 132 (444)
Q Consensus 95 ~~~d---~~~lp~~~~sFDlI~~~~~~l~~~~d~~---------------------------------------~~L~ei 132 (444)
..+. +..-.||+++||+|+++. .+||+.+.+ .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 333568899999999999 599965432 236666
Q ss_pred HhhcCCCeEEEEEcCC
Q 013393 133 DRLLRPGGYFVYSSPE 148 (444)
Q Consensus 133 ~rvLkPGG~lvis~p~ 148 (444)
.+.|+|||+++++...
T Consensus 212 a~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 212 SEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HHHhccCCeEEEEEec
Confidence 8999999999997643
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.13 E-value=1.8e-05 Score=80.18 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=71.3
Q ss_pred CeEEEECCCcchHHHHHhh--C----------------------------------------CceEEEcCcccchHHHHH
Q 013393 46 RNVLDVGCGVASFGAYLLS--H----------------------------------------DIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~--~----------------------------------------~V~gvdis~~dis~a~i~ 83 (444)
..+||.+||+|.++..++. . .++|+|+++.++..+..
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~- 274 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK- 274 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH-
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH-
Confidence 3799999999998877653 1 38888888877655553
Q ss_pred HHHHcCC--CcEEEEecCccCCCCCCCccEEEecccccccc---ccHHHHHHHHHhhcCC--CeEEEEEcCC
Q 013393 84 FALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 148 (444)
Q Consensus 84 ~a~e~~~--~~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~---~d~~~~L~ei~rvLkP--GG~lvis~p~ 148 (444)
.+...+. .+.+...|+.+++.+ .+||+|+|+--...-+ .+...+++++.+.||+ ||.+++.++.
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 3344454 478889998888765 4899999974211111 3445677778888876 8888876654
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.10 E-value=4.5e-06 Score=79.92 Aligned_cols=90 Identities=13% Similarity=0.248 Sum_probs=57.7
Q ss_pred CccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCC
Q 013393 14 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIP 91 (444)
Q Consensus 14 gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~ 91 (444)
|.+|-... ...+.+.+.+.. .++ .+|||||||+|.++..|+++ .|+++|+++.++..+..+.. ...+
T Consensus 8 GQnFL~d~-~i~~~iv~~~~~-----~~~---~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~--~~~~ 76 (255)
T 3tqs_A 8 GQHFLHDS-FVLQKIVSAIHP-----QKT---DTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYN--QQKN 76 (255)
T ss_dssp -CCEECCH-HHHHHHHHHHCC-----CTT---CEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHT--TCTT
T ss_pred CcccccCH-HHHHHHHHhcCC-----CCc---CEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHh--hCCC
Confidence 44554433 344555556543 223 38999999999999999985 57777777655543332221 1357
Q ss_pred cEEEEecCccCCCCC----CCccEEEec
Q 013393 92 STLGVLGTKRLPYPS----RSFELAHCS 115 (444)
Q Consensus 92 ~~~~~~d~~~lp~~~----~sFDlI~~~ 115 (444)
+.+...|+..+++++ ++|| |+++
T Consensus 77 v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 77 ITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp EEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred cEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 889999988887642 5688 6555
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.09 E-value=7.5e-06 Score=79.08 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=63.5
Q ss_pred CCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCC
Q 013393 13 GGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI 90 (444)
Q Consensus 13 ~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~ 90 (444)
.|.+|-... ...+.+.+.+.. ... +|||||||+|.++..|+++ .|+++|+++.++..+..+.. ..
T Consensus 25 ~GQnfL~d~-~i~~~Iv~~~~~--------~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~ 91 (271)
T 3fut_A 25 FGQNFLVSE-AHLRRIVEAARP--------FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GL 91 (271)
T ss_dssp SSCCEECCH-HHHHHHHHHHCC--------CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TS
T ss_pred CCccccCCH-HHHHHHHHhcCC--------CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CC
Confidence 356665443 345555656543 123 6999999999999999885 68999988877654443222 35
Q ss_pred CcEEEEecCccCCCCCC-CccEEEecc
Q 013393 91 PSTLGVLGTKRLPYPSR-SFELAHCSR 116 (444)
Q Consensus 91 ~~~~~~~d~~~lp~~~~-sFDlI~~~~ 116 (444)
++.+..+|+..+++++. .||.|+++.
T Consensus 92 ~v~vi~~D~l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 92 PVRLVFQDALLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp SEEEEESCGGGSCGGGSCTTEEEEEEE
T ss_pred CEEEEECChhhCChhhccCccEEEecC
Confidence 68889999988887642 689998764
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.06 E-value=4e-06 Score=88.71 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=69.1
Q ss_pred CeEEEECCCcchHHHHHhh----------------------CCceEEEcCcccchHHHHHHHHHcCCC------cEEEEe
Q 013393 46 RNVLDVGCGVASFGAYLLS----------------------HDIIAMSLAPNDVHENQIQFALERGIP------STLGVL 97 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~----------------------~~V~gvdis~~dis~a~i~~a~e~~~~------~~~~~~ 97 (444)
.+|||.+||+|.+...+++ ..++|+|+++..+.-+..+... .+.. ..+...
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l-~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL-HDIEGNLDHGGAIRLG 249 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT-TTCCCBGGGTBSEEES
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH-hCCCccccccCCeEeC
Confidence 3799999999998876653 2578888887665544433322 2433 567777
Q ss_pred cCccCC-CCCCCccEEEeccccccc-c------------ccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 98 GTKRLP-YPSRSFELAHCSRCRIDW-L------------QRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 98 d~~~lp-~~~~sFDlI~~~~~~l~~-~------------~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
|+...+ .+.++||+|+++.-.... . ...-.++..+.+.|||||++.+..|..
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 755433 345689999997421111 0 112378999999999999999987653
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.00 E-value=3.3e-06 Score=85.43 Aligned_cols=95 Identities=14% Similarity=0.070 Sum_probs=67.9
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHc--------------CCC-cEEEEecCccCCC-CC
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER--------------GIP-STLGVLGTKRLPY-PS 106 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~--------------~~~-~~~~~~d~~~lp~-~~ 106 (444)
+|||+|||+|.++..++.+ .|+++|+++..+..+..+..... +.. +.+...|+..+.. ..
T Consensus 50 ~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~ 129 (378)
T 2dul_A 50 IVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERH 129 (378)
T ss_dssp EEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHST
T ss_pred EEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhcc
Confidence 8999999999999988863 47888888876655554444331 443 6777777654321 13
Q ss_pred CCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 107 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 107 ~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
++||+|++.- + .....++..+.+.|||||.++++.
T Consensus 130 ~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 130 RYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp TCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 5799999543 1 123578999999999999998864
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.95 E-value=5.1e-06 Score=84.39 Aligned_cols=95 Identities=9% Similarity=0.045 Sum_probs=66.7
Q ss_pred CeEEEECCCcchHHHHHhhC-----CceEEEcCcccchHHHHHHHHHcCCC---cEEEEecCccC-C-CCCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIP---STLGVLGTKRL-P-YPSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-----~V~gvdis~~dis~a~i~~a~e~~~~---~~~~~~d~~~l-p-~~~~sFDlI~~~ 115 (444)
.+|||++||+|.++..++.+ .|+++|+++..+..+.. .++.++.. +.+...|+..+ . ...++||+|++.
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~-N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKE-NFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 38999999999999998872 46778777765544443 33334543 67777775442 1 124679999976
Q ss_pred cccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 116 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 116 ~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
- + .....++..+.+.|+|||+++++.
T Consensus 133 P----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 2 223468999999999999998865
No 269
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.95 E-value=1.7e-05 Score=76.04 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=73.0
Q ss_pred CCeEEEECCCcchHHHHHhh----------------CCceEEEcCcc---cchHH------HHHHHHHc-----------
Q 013393 45 IRNVLDVGCGVASFGAYLLS----------------HDIIAMSLAPN---DVHEN------QIQFALER----------- 88 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~----------------~~V~gvdis~~---dis~a------~i~~a~e~----------- 88 (444)
..+|||+|||+|..+..+++ ..+++++..|. ++..+ ....|++.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 34899999999976655432 25677887763 22211 01112211
Q ss_pred --------CCCcEEEEecCcc-CCCCC----CCccEEEecccccccccc--HHHHHHHHHhhcCCCeEEEEEcCCCCCCC
Q 013393 89 --------GIPSTLGVLGTKR-LPYPS----RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAHD 153 (444)
Q Consensus 89 --------~~~~~~~~~d~~~-lp~~~----~sFDlI~~~~~~l~~~~d--~~~~L~ei~rvLkPGG~lvis~p~~~~~~ 153 (444)
..++.+..+|+.+ ++..+ ..||+|+.-...-.-.++ ...+|.++.++|||||.|+.-+.
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa------ 214 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS------ 214 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC------
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC------
Confidence 1234566777554 44222 279999974311111122 25799999999999999985211
Q ss_pred hhhHHHHHHHHHHHHhcCeEEEeeec
Q 013393 154 PENRRIWNAMYDLLKSMCWKIVSKKD 179 (444)
Q Consensus 154 ~~~~~~~~~l~~l~~~~gf~~v~~~~ 179 (444)
. ..+...+...||++....+
T Consensus 215 -a-----~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 215 -A-----GFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp -B-----HHHHHHHHHHTEEEEEECC
T ss_pred -C-----HHHHHHHHHCCCEEEeCCC
Confidence 1 2467778889998775433
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.92 E-value=9e-06 Score=87.33 Aligned_cols=98 Identities=11% Similarity=0.015 Sum_probs=65.6
Q ss_pred CCeEEEECCCcchHHHH---Hh---h---------C--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCC--
Q 013393 45 IRNVLDVGCGVASFGAY---LL---S---------H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-- 105 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~---La---~---------~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~-- 105 (444)
...|||||||+|.+... .+ + . .|++++-++......+......-+..+.+...+++++..|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45799999999987532 21 2 1 6888888875543333333322245688889998887663
Q ss_pred ---CCCccEEEecccccccc--ccHHHHHHHHHhhcCCCeEEE
Q 013393 106 ---SRSFELAHCSRCRIDWL--QRDGILLLELDRLLRPGGYFV 143 (444)
Q Consensus 106 ---~~sFDlI~~~~~~l~~~--~d~~~~L~ei~rvLkPGG~lv 143 (444)
.++.|+|+|-. +..+. +-....|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSEl-mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL-LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECC-CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEec-cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 47899999754 23332 222467888899999999866
No 271
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.88 E-value=7.2e-06 Score=82.20 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=66.3
Q ss_pred CeEEEECCCcchHHHHHhhC--------------------CceEEEcCcccchHHHHHHHHH-cCCCcEEEEec---Ccc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--------------------DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLG---TKR 101 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--------------------~V~gvdis~~dis~a~i~~a~e-~~~~~~~~~~d---~~~ 101 (444)
-+|+|+||++|..+..+.+. .|...|+...|..........- ...+..|..+. +..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 46999999999766554432 3456677777764443222110 00022343332 444
Q ss_pred CCCCCCCccEEEecccccccccc---------------------------------HHHHHHHHHhhcCCCeEEEEEcC
Q 013393 102 LPYPSRSFELAHCSRCRIDWLQR---------------------------------DGILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 102 lp~~~~sFDlI~~~~~~l~~~~d---------------------------------~~~~L~ei~rvLkPGG~lvis~p 147 (444)
-.||++++|+|+|+. .+||+.+ ...+|+...+.|+|||.++++..
T Consensus 133 rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp CCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred ccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 568999999999999 5999643 23468888999999999998753
No 272
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.81 E-value=1.1e-05 Score=77.55 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=61.7
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEe
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHC 114 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~ 114 (444)
|+++. +|||+|||+|.|+.++++. .+.|+|+.......+. .. ...+.++.....+.....++.+++|+|+|
T Consensus 88 Lk~~~---~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi-~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLS 162 (282)
T 3gcz_A 88 VKPTG---IVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI-MR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLC 162 (282)
T ss_dssp CCCCE---EEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CC-CBTTGGGEEEECSCCGGGSCCCCCSEEEE
T ss_pred CCCCC---EEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc-cc-ccCCCceEEeeCCcchhhcCCCCcCEEEe
Confidence 44554 8999999999999998863 4566776542110000 00 00122333333332333455688999999
Q ss_pred cccccc----ccccHH--HHHHHHHhhcCCC--eEEEEEcCC
Q 013393 115 SRCRID----WLQRDG--ILLLELDRLLRPG--GYFVYSSPE 148 (444)
Q Consensus 115 ~~~~l~----~~~d~~--~~L~ei~rvLkPG--G~lvis~p~ 148 (444)
..+ .+ +.+... .+|.-+.++|+|| |.|++-.-.
T Consensus 163 DmA-pnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 163 DIG-ESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCc-cCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 763 33 222222 3577778899999 999986544
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.80 E-value=9.3e-05 Score=72.04 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=73.9
Q ss_pred CCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHH-----cCCCcEEEEecCccC-CCCCCCccEE
Q 013393 43 GNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----RGIPSTLGVLGTKRL-PYPSRSFELA 112 (444)
Q Consensus 43 ~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e-----~~~~~~~~~~d~~~l-p~~~~sFDlI 112 (444)
.++++||=||-|.|..++.+++. .|+.+++++.-+.-+..-+... ...++.+...|.... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45679999999999999999884 4566666654332222112111 135678888886553 3446789999
Q ss_pred Eeccccccccc----cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhh
Q 013393 113 HCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN 156 (444)
Q Consensus 113 ~~~~~~l~~~~----d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~ 156 (444)
+.-.. -...+ .-..+++.+.+.|+|||.++....+++...+..
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~ 208 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEA 208 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHH
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHH
Confidence 96431 11111 113799999999999999999776655444433
No 274
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.80 E-value=0.00018 Score=72.03 Aligned_cols=120 Identities=10% Similarity=-0.010 Sum_probs=75.4
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCCCCccEEEecc
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 116 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~~sFDlI~~~~ 116 (444)
+.+|. ++||+||.+|.|+..++++ .|+++|..+.+. .. ....++.+...|...+..+.+.||+|+|-.
T Consensus 209 l~~G~---~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~--~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 209 LANGM---WAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ--SL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp SCTTC---EEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH--HH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred CCCCC---EEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh--hh-----ccCCCeEEEeCccccccCCCCCcCEEEEcC
Confidence 45555 9999999999999999986 588888776542 11 123567888888777766677899999976
Q ss_pred ccccccccHHHHHHHHHhhcC---CCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeE
Q 013393 117 CRIDWLQRDGILLLELDRLLR---PGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 173 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLk---PGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~ 173 (444)
. .++...+.-+.+.|. .++.++..-.....+..+.......+.+.++..|+.
T Consensus 279 ~-----~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 279 V-----EKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp S-----SCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred C-----CChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcc
Confidence 2 234444444444444 445443322221112222333455677778888774
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.78 E-value=3.3e-06 Score=80.97 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=49.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCc-------ccchHHHHHHHHHcC--CCcEEEEecCccC-C-CCC--CCcc
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAP-------NDVHENQIQFALERG--IPSTLGVLGTKRL-P-YPS--RSFE 110 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~-------~dis~a~i~~a~e~~--~~~~~~~~d~~~l-p-~~~--~sFD 110 (444)
.+|||+|||+|.++..+++. .|+++|+++ ..+..+..+ +...+ .++.+...|...+ + +++ ++||
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n-~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLN-PETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHS-HHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred CeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhH-HHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 37999999999999999874 688998888 444333222 11122 2378888887663 3 444 6899
Q ss_pred EEEeccc
Q 013393 111 LAHCSRC 117 (444)
Q Consensus 111 lI~~~~~ 117 (444)
+|++...
T Consensus 164 ~V~~dP~ 170 (258)
T 2r6z_A 164 IVYLDPM 170 (258)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999763
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.75 E-value=4.4e-05 Score=73.96 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC--C----ceEEEcCcccchHHHHHHHH
Q 013393 13 GGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--D----IIAMSLAPNDVHENQIQFAL 86 (444)
Q Consensus 13 ~gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~--~----V~gvdis~~dis~a~i~~a~ 86 (444)
.|.+|.... ...+.+.+.+.. .++ .+|||||||+|.++..|+++ . |+++|+++.++..+..+ +
T Consensus 20 ~GQ~fL~d~-~i~~~iv~~~~~-----~~~---~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~- 88 (279)
T 3uzu_A 20 FGQNFLVDH-GVIDAIVAAIRP-----ERG---ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F- 88 (279)
T ss_dssp CSCCEECCH-HHHHHHHHHHCC-----CTT---CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H-
T ss_pred CCccccCCH-HHHHHHHHhcCC-----CCc---CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c-
Confidence 466665553 345556666643 223 38999999999999999873 4 88888887665544433 1
Q ss_pred HcCCCcEEEEecCccCCCC
Q 013393 87 ERGIPSTLGVLGTKRLPYP 105 (444)
Q Consensus 87 e~~~~~~~~~~d~~~lp~~ 105 (444)
..++.+...|+..++++
T Consensus 89 --~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 89 --GELLELHAGDALTFDFG 105 (279)
T ss_dssp --GGGEEEEESCGGGCCGG
T ss_pred --CCCcEEEECChhcCChh
Confidence 45688899999888865
No 277
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.74 E-value=6.6e-05 Score=72.63 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=68.5
Q ss_pred cccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCC
Q 013393 16 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP 91 (444)
Q Consensus 16 ~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~ 91 (444)
.-.+++-+.++...+ .+ ++++ ++|||+||++|.|+.++++. .|.|+|+...+...... ....+.+
T Consensus 62 yrSRaa~KL~ei~ek--~l----~~~g---~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~ 130 (300)
T 3eld_A 62 SVSRGAAKIRWLHER--GY----LRIT---GRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWN 130 (300)
T ss_dssp CSSTTHHHHHHHHHH--TS----CCCC---EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGG
T ss_pred ccchHHHHHHHHHHh--CC----CCCC---CEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCc
Confidence 344555555555544 32 3344 48999999999999999974 35666665421100000 0000112
Q ss_pred cEEEEecCccCCCCCCCccEEEeccccccccc----cH---HHHHHHHHhhcCCC-eEEEEEcCC
Q 013393 92 STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ----RD---GILLLELDRLLRPG-GYFVYSSPE 148 (444)
Q Consensus 92 ~~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~----d~---~~~L~ei~rvLkPG-G~lvis~p~ 148 (444)
+.....+.....++.+.+|+|+|..+ .+ .. |. ..+|.-+.++|+|| |.|++-...
T Consensus 131 iv~~~~~~di~~l~~~~~DlVlsD~A-Pn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 131 IVKFKDKSNVFTMPTEPSDTLLCDIG-ES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp GEEEECSCCTTTSCCCCCSEEEECCC-CC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eEEeecCceeeecCCCCcCEEeecCc-CC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 22222222223345678999999652 33 21 11 14577778899999 999996544
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.72 E-value=7.4e-05 Score=71.06 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=52.7
Q ss_pred CccccccHHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhhC---CceEEEcCcccchHHHHHHHHHc-C
Q 013393 14 GTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-G 89 (444)
Q Consensus 14 gt~f~~g~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~~---~V~gvdis~~dis~a~i~~a~e~-~ 89 (444)
|.+|... ....+.+.+.+.. .+ ..+|||||||+|.++..++++ .++++|++ +.+++.++++ .
T Consensus 10 GQnfl~d-~~i~~~iv~~~~~-----~~---~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid-----~~~~~~~~~~~~ 75 (249)
T 3ftd_A 10 GQHLLVS-EGVLKKIAEELNI-----EE---GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELD-----REMVENLKSIGD 75 (249)
T ss_dssp CSSCEEC-HHHHHHHHHHTTC-----CT---TCEEEEEESCHHHHHHHHTTSCCSEEEEECCC-----HHHHHHHTTSCC
T ss_pred cccccCC-HHHHHHHHHhcCC-----CC---cCEEEEEcCchHHHHHHHHHcCCCeEEEEECC-----HHHHHHHHhccC
Confidence 5555443 3345556666543 22 338999999999999999876 35566554 5555666554 3
Q ss_pred CCcEEEEecCccCCCCC
Q 013393 90 IPSTLGVLGTKRLPYPS 106 (444)
Q Consensus 90 ~~~~~~~~d~~~lp~~~ 106 (444)
.++.+...|+..+++++
T Consensus 76 ~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 76 ERLEVINEDASKFPFCS 92 (249)
T ss_dssp TTEEEECSCTTTCCGGG
T ss_pred CCeEEEEcchhhCChhH
Confidence 45788889988888764
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.71 E-value=0.00018 Score=78.47 Aligned_cols=119 Identities=17% Similarity=0.194 Sum_probs=66.6
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhh----ccccc-----cccccccCCCCCCcccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLIG-----TVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~----rg~~~-----~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
..|+|+.++-|+|+-++..... -.|+-+|.. .-|...-+ -|+-+ +-.|..+.++....+||+|-++--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 3799999999999877653321 135555543 33443222 23321 112332323334578999987653
Q ss_pred -cccccc------CCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhcccee
Q 013393 360 -FSEIEE------RGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDG 410 (444)
Q Consensus 360 -~~~~~~------~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~ 410 (444)
|+.-.+ ..-....++-+.-|+|+|||.+++.........-.+.+....++.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~ 676 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 676 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCce
Confidence 321100 012356788899999999999999765522222244455555654
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.63 E-value=6.8e-05 Score=79.30 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=63.5
Q ss_pred eEEEECCCcchHHHHHhh-------------------CCceEEEcCcccchHHHHHHHHHcCCCcEE--EEecCccCC-C
Q 013393 47 NVLDVGCGVASFGAYLLS-------------------HDIIAMSLAPNDVHENQIQFALERGIPSTL--GVLGTKRLP-Y 104 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~-------------------~~V~gvdis~~dis~a~i~~a~e~~~~~~~--~~~d~~~lp-~ 104 (444)
+|||.+||+|.+...+++ ..+.|+|+++..+.-+..+... .+....+ ...|....+ +
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-RGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-TTCCCBCCSSSCCTTTSCSC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-hCCCcccceeccchhcCccc
Confidence 899999999988776542 2355665555444333333222 3444333 455644443 4
Q ss_pred CCCCccEEEeccccc--ccc----------------------c----cHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 105 PSRSFELAHCSRCRI--DWL----------------------Q----RDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 105 ~~~sFDlI~~~~~~l--~~~----------------------~----d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
++.+||+|+++--.. .|. + ..-.++..+.+.|+|||++.+..|..
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 567899999973211 110 0 01168999999999999999987764
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.63 E-value=0.0001 Score=77.94 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=76.5
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhh-------CCceEEEcCcccchHHHHHHHHHcCC---CcE
Q 013393 24 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-------HDIIAMSLAPNDVHENQIQFALERGI---PST 93 (444)
Q Consensus 24 y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~-------~~V~gvdis~~dis~a~i~~a~e~~~---~~~ 93 (444)
..+.+.+++.... .+ ....+|||.+||+|.+...+++ ..+.|+|+++....-+..+... .+. +..
T Consensus 205 Vv~lmv~ll~~~~---~~-~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~~~~ 279 (542)
T 3lkd_A 205 VAKLMTQIAFLGR---ED-KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-HGVPIENQF 279 (542)
T ss_dssp HHHHHHHHHHTTC---TT-CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEE
T ss_pred HHHHHHHHHhccc---CC-CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-cCCCcCccc
Confidence 4555555554211 01 2234899999999988776654 2477888877665555444332 344 356
Q ss_pred EEEecCccC--C-CCCCCccEEEecccc-cccc------c--------------c-HHHHHHHHHhhcC-CCeEEEEEcC
Q 013393 94 LGVLGTKRL--P-YPSRSFELAHCSRCR-IDWL------Q--------------R-DGILLLELDRLLR-PGGYFVYSSP 147 (444)
Q Consensus 94 ~~~~d~~~l--p-~~~~sFDlI~~~~~~-l~~~------~--------------d-~~~~L~ei~rvLk-PGG~lvis~p 147 (444)
+...|.... | .+...||+|+++--. ..|. . + .-.++..+.+.|+ |||++.+..|
T Consensus 280 I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 280 LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 777886554 4 346789999997210 1110 0 0 1248999999999 9999998877
Q ss_pred CC
Q 013393 148 EA 149 (444)
Q Consensus 148 ~~ 149 (444)
..
T Consensus 360 ~g 361 (542)
T 3lkd_A 360 HG 361 (542)
T ss_dssp TH
T ss_pred ch
Confidence 64
No 282
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.54 E-value=0.00029 Score=64.20 Aligned_cols=137 Identities=16% Similarity=0.153 Sum_probs=91.3
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccccccccccccCC---CCCC-cccchhhcccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGTVHDWCESF---STYP-RTYDLLHAWKVFSEI 363 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~~~~~~~~~~~---~~y~-~~~dl~h~~~~~~~~ 363 (444)
-..|+|+.++.|.++..|..... +|+-++- +..+...-+++.+...+.-.+.+ +..+ .+||+|.+.+++. .
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 37899999999999999987643 5666664 45666666665444333222222 3233 4599999998877 2
Q ss_pred ccCCCChhhhhhhhcccccCCcEEEEeccH--------------------------------HHHHHHHHHHhhccceeE
Q 013393 364 EERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------------------------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 364 ~~~~c~~~~~~~e~drilrp~g~~~~rd~~--------------------------------~~~~~~~~~~~~~~w~~~ 411 (444)
.+...+|-++-|+|+|||.+++.+.. ...+++++++..-.+++.
T Consensus 129 ----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 129 ----QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp ----SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred ----hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 35789999999999999999996530 146889999999999885
Q ss_pred EeccccccCCCCCCCceEEEEEe
Q 013393 412 LSEVEPRIDALSSSEERVLIAKK 434 (444)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~~k 434 (444)
.. .+...........-+++++|
T Consensus 205 ~~-~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 205 SL-QEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp EE-ECCCCTTCSSCSCEEEEEEE
T ss_pred EE-ecCCCCCCCCceeEEEEeec
Confidence 32 22111111111345667776
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.53 E-value=3.6e-05 Score=75.37 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=45.4
Q ss_pred eEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCC--CC---CCCccEEEecc
Q 013393 47 NVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YP---SRSFELAHCSR 116 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp--~~---~~sFDlI~~~~ 116 (444)
+|||+|||+|.++..++++ .|+++|+++.++..+..+. ...+.++.+...|+..++ ++ .++||.|++..
T Consensus 29 ~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~-~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 29 IILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKL-KEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp EEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-GGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcC
Confidence 8999999999999999874 5777777665554433222 122346777777776654 11 14688887643
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.52 E-value=0.0002 Score=78.17 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=66.6
Q ss_pred CeEEEECCCcchHHHHHhhC-------CceEEEcCcccchHHHHHHHHH-----cCCCc-EEEEecCccC-CCCCCCccE
Q 013393 46 RNVLDVGCGVASFGAYLLSH-------DIIAMSLAPNDVHENQIQFALE-----RGIPS-TLGVLGTKRL-PYPSRSFEL 111 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~-------~V~gvdis~~dis~a~i~~a~e-----~~~~~-~~~~~d~~~l-p~~~~sFDl 111 (444)
.+|||.|||+|.+...+++. .++|+|+++..+..+..+.... .+... .+...|.... +.+.+.||+
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDV 402 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSV 402 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEE
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCE
Confidence 48999999999999888763 3688888887655442222111 12222 3433333332 233578999
Q ss_pred EEecccccc-ccc--------------------------c-HHHHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 112 AHCSRCRID-WLQ--------------------------R-DGILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 112 I~~~~~~l~-~~~--------------------------d-~~~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
|+++--... ... + ...++..+.+.|+|||++.+..|..+
T Consensus 403 VIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 403 VVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred EEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 999742211 000 0 23578889999999999999888754
No 285
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.51 E-value=4.5e-05 Score=77.74 Aligned_cols=70 Identities=13% Similarity=0.004 Sum_probs=51.2
Q ss_pred CeEEEECCCcchHHHHHhhC--CceEEEcCcccchHHHHHHHHHc-CC-CcEEEEecCccC-CC-CCCCccEEEec
Q 013393 46 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-GI-PSTLGVLGTKRL-PY-PSRSFELAHCS 115 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~~--~V~gvdis~~dis~a~i~~a~e~-~~-~~~~~~~d~~~l-p~-~~~sFDlI~~~ 115 (444)
.+|||+|||+|..+..+++. .|+++|+++.++..+..+..... +. ++.+...|.... +. ++++||+|++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 48999999999999999875 58888888877765554443320 43 578888887663 32 23589999985
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.50 E-value=0.0004 Score=63.94 Aligned_cols=90 Identities=8% Similarity=-0.031 Sum_probs=57.3
Q ss_pred CeEEEECCCcchHHHHHhh---CCceEEEcCcccchHHHHHHHHHcCC----CcEEEEecCcc---------------CC
Q 013393 46 RNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGI----PSTLGVLGTKR---------------LP 103 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~---~~V~gvdis~~dis~a~i~~a~e~~~----~~~~~~~d~~~---------------lp 103 (444)
++|||+||| .-+..+++ ..|+++|.++.....+...++ +.+. ++.+..++... ++
T Consensus 32 ~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp SEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 489999996 45555554 467788777755444433333 3343 46677777432 22
Q ss_pred --------C-CCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEE
Q 013393 104 --------Y-PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 144 (444)
Q Consensus 104 --------~-~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvi 144 (444)
. ..++||+|+.-. ......+..+.+.|+|||.+++
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg------~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDG------RFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECS------SSHHHHHHHHHHHCSSCEEEEE
T ss_pred HHhhhhhccccCCCCCEEEEeC------CCchhHHHHHHHhcCCCeEEEE
Confidence 1 136899999654 2223667778899999999976
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.39 E-value=0.00052 Score=65.07 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=56.8
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC-Cc---eEEEcCcccchHHHHHHHHHcCCCc-EEEEe-cCccCCCCCCCccEE
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH-DI---IAMSLAPNDVHENQIQFALERGIPS-TLGVL-GTKRLPYPSRSFELA 112 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~-~V---~gvdis~~dis~a~i~~a~e~~~~~-~~~~~-d~~~lp~~~~sFDlI 112 (444)
++|+. +|||+||+.|+|+.+.++. ++ .|..+. .|++..-+. ....+.++ .|... |+..++ ...+|+|
T Consensus 71 ikpg~---~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig-~D~~~~P~~-~~~~Gv~~i~~~~G~Df~~~~--~~~~DvV 143 (269)
T 2px2_A 71 VQPIG---KVVDLGCGRGGWSYYAATMKNVQEVRGYTKG-GPGHEEPML-MQSYGWNIVTMKSGVDVFYKP--SEISDTL 143 (269)
T ss_dssp CCCCE---EEEEETCTTSHHHHHHTTSTTEEEEEEECCC-STTSCCCCC-CCSTTGGGEEEECSCCGGGSC--CCCCSEE
T ss_pred CCCCC---EEEEcCCCCCHHHHHHhhhcCCCCceeEEEc-cccccCCCc-ccCCCceEEEeeccCCccCCC--CCCCCEE
Confidence 45666 9999999999999999885 12 344333 231000000 00011122 22224 666543 4679999
Q ss_pred Eecccc--ccccccHH---HHHHHHHhhcCCCe-EEEEEcCC
Q 013393 113 HCSRCR--IDWLQRDG---ILLLELDRLLRPGG-YFVYSSPE 148 (444)
Q Consensus 113 ~~~~~~--l~~~~d~~---~~L~ei~rvLkPGG-~lvis~p~ 148 (444)
+|-.+- -+..-|.. .+|.-+.++|+||| -|++-...
T Consensus 144 LSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 144 LCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 995421 11111222 24656668999999 88875433
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.37 E-value=9.6e-05 Score=70.75 Aligned_cols=93 Identities=12% Similarity=0.041 Sum_probs=57.9
Q ss_pred CeEEEECCCcchHHHHHhh--CCceEEEcCcccchH--HHHHHHHHc----C---CCcEEEEecCcc-CCCCCCCccEEE
Q 013393 46 RNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHE--NQIQFALER----G---IPSTLGVLGTKR-LPYPSRSFELAH 113 (444)
Q Consensus 46 ~rVLDVGCGtG~~a~~La~--~~V~gvdis~~dis~--a~i~~a~e~----~---~~~~~~~~d~~~-lp~~~~sFDlI~ 113 (444)
.+|||+|||+|..+..+++ ..|+++|.++....- ..++.++++ + .++.+...|... ++....+||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 3799999999999999986 478999988854221 222233221 1 246777888655 443234799999
Q ss_pred eccccccccccHHHHHHHHHhhcCCCe
Q 013393 114 CSRCRIDWLQRDGILLLELDRLLRPGG 140 (444)
Q Consensus 114 ~~~~~l~~~~d~~~~L~ei~rvLkPGG 140 (444)
+... .+. .....++++..++|++.+
T Consensus 170 lDP~-y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPM-FPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCC-CCC-CCC-----HHHHHHHHHS
T ss_pred EcCC-CCC-cccchHHHHHHHHHHHhh
Confidence 9763 444 333456777777777755
No 289
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.36 E-value=0.00021 Score=68.07 Aligned_cols=64 Identities=8% Similarity=0.033 Sum_probs=44.0
Q ss_pred eEEEECCCcchHHHHHhh-CC--ceEEEcCcccchHHHHHHHHHcC---CCcEEEEecCccCCCCC-----CCccEEEec
Q 013393 47 NVLDVGCGVASFGAYLLS-HD--IIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPS-----RSFELAHCS 115 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~-~~--V~gvdis~~dis~a~i~~a~e~~---~~~~~~~~d~~~lp~~~-----~sFDlI~~~ 115 (444)
+|||||||+|.++. +.. .. |+++|+++. +++.++++. .++.+...|+..+++++ +..|.|+++
T Consensus 24 ~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~-----~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 24 AMVEIGPGLAALTE-PVGERLDQLTVIELDRD-----LAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp CEEEECCTTTTTHH-HHHTTCSCEEEECCCHH-----HHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred EEEEECCCCcHHHH-hhhCCCCeEEEEECCHH-----HHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 79999999999999 755 34 777766654 445555542 35788888988877642 134567665
Q ss_pred c
Q 013393 116 R 116 (444)
Q Consensus 116 ~ 116 (444)
.
T Consensus 98 l 98 (252)
T 1qyr_A 98 L 98 (252)
T ss_dssp C
T ss_pred C
Confidence 3
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.35 E-value=0.00032 Score=61.06 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=53.6
Q ss_pred eEEEECCCcc-hHHHHHhh-C--CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCCCC--CCccEEEecccccc
Q 013393 47 NVLDVGCGVA-SFGAYLLS-H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS--RSFELAHCSRCRID 120 (444)
Q Consensus 47 rVLDVGCGtG-~~a~~La~-~--~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~~~--~sFDlI~~~~~~l~ 120 (444)
+|||||||.| ..+..|++ . .|+++|+++..+. +...|... |..+ +.||+|++.+.
T Consensus 38 rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirP--- 98 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRP--- 98 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESC---
T ss_pred cEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCC---
Confidence 8999999999 69999986 5 4788888887653 44555443 3322 47999998764
Q ss_pred ccccHHHHHHHHHhhcCCCeEEEEE
Q 013393 121 WLQRDGILLLELDRLLRPGGYFVYS 145 (444)
Q Consensus 121 ~~~d~~~~L~ei~rvLkPGG~lvis 145 (444)
.++....+.++.+-.. .-+++.
T Consensus 99 -P~El~~~i~~lA~~v~--adliI~ 120 (153)
T 2k4m_A 99 -PAEIHSSLMRVADAVG--ARLIIK 120 (153)
T ss_dssp -CTTTHHHHHHHHHHHT--CEEEEE
T ss_pred -CHHHHHHHHHHHHHcC--CCEEEE
Confidence 3455667777776544 556654
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.34 E-value=4.7e-05 Score=76.32 Aligned_cols=110 Identities=19% Similarity=0.204 Sum_probs=67.4
Q ss_pred CCCCCCCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcC-------CCcEEEEecCccCC-CC
Q 013393 38 KLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-------IPSTLGVLGTKRLP-YP 105 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~-------~~~~~~~~d~~~lp-~~ 105 (444)
+.++|. +|||+.+|.|.=+.++++. .+++.|+++.-+.... +..+..+ .++.+...|...++ ..
T Consensus 145 ~~~pg~---~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~-~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~ 220 (359)
T 4fzv_A 145 GLQPGD---IVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ-KILHSYVPEEIRDGNQVRVTSWDGRKWGELE 220 (359)
T ss_dssp CCCTTE---EEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHH-HHHHHHSCTTTTTSSSEEEECCCGGGHHHHS
T ss_pred CCCCCC---EEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHH-HHHHHhhhhhhccCCceEEEeCchhhcchhc
Confidence 445555 8999999999988888774 3555555543222111 1222212 35666677766654 34
Q ss_pred CCCccEEEec-cccc------c------cccc----------HHHHHHHHHhhcCCCeEEEEEcCCCCC
Q 013393 106 SRSFELAHCS-RCRI------D------WLQR----------DGILLLELDRLLRPGGYFVYSSPEAYA 151 (444)
Q Consensus 106 ~~sFDlI~~~-~~~l------~------~~~d----------~~~~L~ei~rvLkPGG~lvis~p~~~~ 151 (444)
.+.||.|++- -|.- . +... ..++|..+.+.|||||+++.++=+...
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 5789999961 1211 1 1000 126888999999999999998766543
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.30 E-value=0.0031 Score=60.93 Aligned_cols=134 Identities=12% Similarity=0.071 Sum_probs=80.4
Q ss_pred CCeEEEECCCcchHHHHHh---------hCCceEEEcCccc------------------------ch-HHHHHHHHHcC-
Q 013393 45 IRNVLDVGCGVASFGAYLL---------SHDIIAMSLAPND------------------------VH-ENQIQFALERG- 89 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La---------~~~V~gvdis~~d------------------------is-~a~i~~a~e~~- 89 (444)
+++|||+|+..|..+..++ .+.++++|..... .+ +...+...+.+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 4489999999998766653 3568888864211 00 11112222233
Q ss_pred --CCcEEEEecCcc-CC-CCCCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHH
Q 013393 90 --IPSTLGVLGTKR-LP-YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYD 165 (444)
Q Consensus 90 --~~~~~~~~d~~~-lp-~~~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~ 165 (444)
.++.+..+++.+ +| .++++||+|+.-.. .+ ......|..+...|+|||++++-+... .+.. -..+.+
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y-~~~~~~Le~~~p~L~pGGiIv~DD~~~---~~G~---~~Av~E 257 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LY-ESTWDTLTNLYPKVSVGGYVIVDDYMM---CPPC---KDAVDE 257 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC--SH-HHHHHHHHHHGGGEEEEEEEEESSCTT---CHHH---HHHHHH
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC--cc-ccHHHHHHHHHhhcCCCEEEEEcCCCC---CHHH---HHHHHH
Confidence 457888887544 44 44578999996532 12 334578999999999999999854421 1222 234455
Q ss_pred HHHhcCeE--EEeeecceeEeecc
Q 013393 166 LLKSMCWK--IVSKKDQTVIWAKP 187 (444)
Q Consensus 166 l~~~~gf~--~v~~~~~~~~w~k~ 187 (444)
+.++.+++ +........+|+|+
T Consensus 258 f~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 258 YRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHhcCCceEEEEecCEEEEEEeC
Confidence 55655643 33444455677764
No 293
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.27 E-value=0.0032 Score=57.18 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=80.8
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccCCCchhHHhhccccccccccccCCCCCCcccchhhccccccccccCCC
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERGC 368 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c 368 (444)
-..|+|+.++.|.++..|. . +|+=++.... . +-+.+.-.+.++.-+.+||+|.+..++. . -
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~-----~v~~~D~s~~-~-------~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~----~ 128 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-N-----PVHCFDLASL-D-------PRVTVCDMAQVPLEDESVDVAVFCLSLM-G----T 128 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-S-----CEEEEESSCS-S-------TTEEESCTTSCSCCTTCEEEEEEESCCC-S----S
T ss_pred CCeEEEECCcCCHHHHHhh-c-----cEEEEeCCCC-C-------ceEEEeccccCCCCCCCEeEEEEehhcc-c----c
Confidence 3579999999999999884 2 3333332211 1 1111212223443357999999988875 2 2
Q ss_pred ChhhhhhhhcccccCCcEEEEeccHH---HHHHHHHHHhhccceeEEeccccccCCCCCCCceEEEEEec
Q 013393 369 SFEDLLIEMDRMLRPEGFVIIRDKSS---IINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 369 ~~~~~~~e~drilrp~g~~~~rd~~~---~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
+...+|-|+-|+|+|||.+++-+... ..+++.+++....++..... .. .+.--+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~--~~-----~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKD--LT-----NSHFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEE--CC-----STTCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEe--cC-----CCeEEEEEEEec
Confidence 57899999999999999999976544 46788888888888874321 11 123468888886
No 294
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.20 E-value=0.00021 Score=68.46 Aligned_cols=99 Identities=11% Similarity=0.213 Sum_probs=67.2
Q ss_pred ceeEEEecccccchhhhhcc-CCCceEEEeccccC-CCchhHHhhc----cccccccccccCCCCCCcccchhhcccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALK-DKDVWVMNVAPVRM-SARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~-~~~~wv~~~~~~~~-~~~l~~~~~r----g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
.-..|+|+.++.|+++..|. ..+. +|+-++- +..+...-++ |+-.-.+-.+..+..+|.+||+|.+.++|.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 140 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchh
Confidence 33579999999999998887 3343 5655554 3555544443 442221112222233458999999999988
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++.. -+...++-|+-|+|+|||.+++.+
T Consensus 141 ~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 141 HFGH--ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GTCT--TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCh--HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5532 357899999999999999999954
No 295
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.17 E-value=0.0018 Score=59.08 Aligned_cols=160 Identities=14% Similarity=0.132 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc-------c
Q 013393 267 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-------I 334 (444)
Q Consensus 267 ~~w~~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~-------~ 334 (444)
.....+.+.....+. ...-..|+|+.++.|.++..|.+.. ..-+|+-++- +..+...-++ |+ +
T Consensus 12 ~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLK----SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRI 86 (219)
T ss_dssp CHHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTE
T ss_pred cchHHHHHHHHHHHh----hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcce
Confidence 344445544444443 2234589999999999999997642 1124555553 3444433322 21 2
Q ss_pred cccc-ccccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccHH-------------------
Q 013393 335 GTVH-DWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS------------------- 394 (444)
Q Consensus 335 ~~~~-~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~------------------- 394 (444)
-+++ |. +..+.-+.+||+|-+..++..+.. -.+..++-++-|+|+|||.+++-+..+
T Consensus 87 ~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3jwg_A 87 SLFQSSL-VYRDKRFSGYDAATVIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHR 163 (219)
T ss_dssp EEEECCS-SSCCGGGTTCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCT
T ss_pred EEEeCcc-cccccccCCCCEEEEHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCce
Confidence 2222 33 334444579999999999985532 135789999999999999887744332
Q ss_pred ---HHHHHH----HHHhhccceeEEeccccccCCCCCCCceEEEEEec
Q 013393 395 ---IINYIR----KFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 395 ---~~~~~~----~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
..++++ .++..-.+++...-+-.. .+......+|-||+|+
T Consensus 164 ~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~-~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 164 FEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI-DDEFGSPTQMGVFTLG 210 (219)
T ss_dssp TSBCHHHHHHHHHHHHHHHTEEEEEEEESCC-CTTSCCSEEEEEEEEC
T ss_pred eeecHHHHHHHHHHHHHHCCcEEEEEecCCc-cccCCCCeEEEEEecc
Confidence 123344 778888888876533222 2233457899999986
No 296
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.13 E-value=0.0014 Score=61.70 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc-cccccccccCCC
Q 013393 268 IWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL-IGTVHDWCESFS 345 (444)
Q Consensus 268 ~w~~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~-~~~~~~~~~~~~ 345 (444)
.|....+.....+...+. .-..|+|+.++.|.++..|.... .+|+-++- +..+...-++-- +-+.+.=.+.++
T Consensus 32 ~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 32 DYHREAADLAALVRRHSP--KAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFS 106 (263)
T ss_dssp CHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC
T ss_pred CHHHHHHHHHHHHHhhCC--CCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCC
Confidence 455555544444543333 23579999999999999998763 25666664 345555444421 222222233445
Q ss_pred CCCcccchhhccc-cccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 346 TYPRTYDLLHAWK-VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 346 ~y~~~~dl~h~~~-~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
. +.+||+|.+.. +|..+.. .-+...+|-++-|+|+|||.++|.
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-cCCcCEEEEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4 89999999987 8774421 124678899999999999999994
No 297
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.06 E-value=0.0017 Score=59.92 Aligned_cols=96 Identities=18% Similarity=0.245 Sum_probs=64.0
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc-cccccccccCCCCCCcccchhhccc-ccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-IGTVHDWCESFSTYPRTYDLLHAWK-VFS 361 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~-~~~~~~~~~~~~~y~~~~dl~h~~~-~~~ 361 (444)
-..|+|+.++.|.++..|..... +|+-++. +..+...-++ |+ +-+.+.=.+.++ +|.+||+|.+.+ +|.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-INRKFDLITCCLDSTN 113 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CSCCEEEEEECTTGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-ccCCceEEEEcCcccc
Confidence 35899999999999999876532 4555554 3444433322 32 222222223333 458999999998 887
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
.+.. .-+...+|-++-|+|+|||.+++
T Consensus 114 ~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 114 YIID-SDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GCCS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCC-HHHHHHHHHHHHHhcCCCcEEEE
Confidence 5421 12478899999999999999998
No 298
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.02 E-value=0.00033 Score=65.38 Aligned_cols=124 Identities=12% Similarity=0.120 Sum_probs=81.7
Q ss_pred ccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc----ccccccccccCCCCCCcccchhhccc
Q 013393 284 AQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG----LIGTVHDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 284 l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg----~~~~~~~~~~~~~~y~~~~dl~h~~~ 358 (444)
+....-..|+|+.++.|.++..|...- .-+|+-++- +..+...-++- -+-+.+.-.+.++.-+.+||+|.+.+
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 166 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW 166 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc
Confidence 344455689999999999998886532 124555553 34454444431 12222222233454458999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEeccH----------------HHHHHHHHHHhhccceeE
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~----------------~~~~~~~~~~~~~~w~~~ 411 (444)
++..+.. -+...+|-++-|+|+|||.++|.+.. ...++++++++.-.++..
T Consensus 167 ~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 167 TAIYLTD--ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp CGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred hhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 8875421 13788999999999999999997731 124677888887777763
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.99 E-value=0.0017 Score=62.73 Aligned_cols=103 Identities=18% Similarity=0.255 Sum_probs=63.2
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCC-cEEEEe-cCccCCCCCCCccEE
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP-STLGVL-GTKRLPYPSRSFELA 112 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~-~~~~~~-d~~~lp~~~~sFDlI 112 (444)
+++++ +|||+||++|.|+.+.+.. .|.|+|+-.....+.+ ..++.+-+ +.+... |+..++. ..+|+|
T Consensus 92 l~~~~---~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~--~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~i 164 (321)
T 3lkz_A 92 LEPVG---KVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ--LVQSYGWNIVTMKSGVDVFYRPS--ECCDTL 164 (321)
T ss_dssp CCCCE---EEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC--CCCBTTGGGEEEECSCCTTSSCC--CCCSEE
T ss_pred CCCCC---EEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc--hhhhcCCcceEEEeccCHhhCCC--CCCCEE
Confidence 34555 8999999999999988763 5788888765321111 00111212 334333 5545543 669999
Q ss_pred EeccccccccccHH-------HHHHHHHhhcCCC-eEEEEEcCCCC
Q 013393 113 HCSRCRIDWLQRDG-------ILLLELDRLLRPG-GYFVYSSPEAY 150 (444)
Q Consensus 113 ~~~~~~l~~~~d~~-------~~L~ei~rvLkPG-G~lvis~p~~~ 150 (444)
+|-.. +-.+++. +.|.-+.+.|++| |-|++-.-.+|
T Consensus 165 vcDig--eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 165 LCDIG--ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred EEECc--cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 99652 3223321 3566667889999 89988665544
No 300
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.99 E-value=0.00058 Score=61.05 Aligned_cols=114 Identities=17% Similarity=0.252 Sum_probs=75.4
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHh----hccc--cccccccccCCCCCCcccchhhccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIY----DRGL--IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~----~rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
..|+|+.++.|.++..|..... +|+-++. +..+...- ..|+ +-+.+.=.+.++. +.+||+|.+.++|..
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 4899999999999998876532 5555554 23333322 2333 2222222233444 899999999998874
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEecc--------------HHHHHHHHHHHhhccceeE
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRDK--------------SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd~--------------~~~~~~~~~~~~~~~w~~~ 411 (444)
+.. -+...++-++-|+|+|||.+++-+. .-..+++++++.. |+..
T Consensus 110 ~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~ 168 (199)
T 2xvm_A 110 LEA--KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERV 168 (199)
T ss_dssp SCG--GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred CCH--HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEE
Confidence 431 2478899999999999999877431 1134677777777 7764
No 301
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.95 E-value=0.0014 Score=57.92 Aligned_cols=141 Identities=14% Similarity=0.074 Sum_probs=84.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccc-cccccccccCCCCCCcccchhhcc-ccccccccC
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGL-IGTVHDWCESFSTYPRTYDLLHAW-KVFSEIEER 366 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~-~~~~~~~~~~~~~y~~~~dl~h~~-~~~~~~~~~ 366 (444)
..|+|+.++.|.++..|..... +|+-++.. ..+...-++.- +-+.+.-.+.++.-+.+||+|.++ .++.....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~- 123 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE- 123 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH-
T ss_pred CeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh-
Confidence 4899999999999999876532 55555542 33333333210 222222222233325799999998 56663321
Q ss_pred CCChhhhhhhhcccccCCcEEEEeccHH---HHHHHHHHHhhccceeEEeccccccCCCCC-CCceEEEEEec
Q 013393 367 GCSFEDLLIEMDRMLRPEGFVIIRDKSS---IINYIRKFITALKWDGWLSEVEPRIDALSS-SEERVLIAKKK 435 (444)
Q Consensus 367 ~c~~~~~~~e~drilrp~g~~~~rd~~~---~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~l~~~k~ 435 (444)
-....++-++-|+|+|||.+++-.... ..+++.+++....+++.......+..+... ..--+++++|+
T Consensus 124 -~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 124 -DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 135788999999999999999954322 367788888888888753322212222221 23345666663
No 302
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.91 E-value=0.0015 Score=65.72 Aligned_cols=96 Identities=10% Similarity=-0.003 Sum_probs=58.4
Q ss_pred eEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCc-EEEEecCccCCCCCCCccEEEeccccccccccH
Q 013393 47 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPS-TLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 125 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~-~~~~~d~~~lp~~~~sFDlI~~~~~~l~~~~d~ 125 (444)
+||.++.+.|.++..|+...++.++=+-. ...+..+..+.++... .+...+..+ -+...||+|+... -......
T Consensus 41 ~~~~~~d~~gal~~~~~~~~~~~~~ds~~-~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~l--pk~~~~l 115 (375)
T 4dcm_A 41 PVLILNDAFGALSCALAEHKPYSIGDSYI-SELATRENLRLNGIDESSVKFLDSTA--DYPQQPGVVLIKV--PKTLALL 115 (375)
T ss_dssp CEEEECCSSSHHHHHTGGGCCEEEESCHH-HHHHHHHHHHHTTCCGGGSEEEETTS--CCCSSCSEEEEEC--CSCHHHH
T ss_pred CEEEECCCCCHHHHhhccCCceEEEhHHH-HHHHHHHHHHHcCCCccceEeccccc--ccccCCCEEEEEc--CCCHHHH
Confidence 69999999999998888777766532211 1223333444445432 122233222 2246799988532 2223344
Q ss_pred HHHHHHHHhhcCCCeEEEEEcC
Q 013393 126 GILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 126 ~~~L~ei~rvLkPGG~lvis~p 147 (444)
...|.++...|+||+.+++...
T Consensus 116 ~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 116 EQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHTTCCTTSEEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEEec
Confidence 5678889999999999987543
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.90 E-value=0.0019 Score=60.45 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=64.0
Q ss_pred CCCCCCCCeEEEECCCcchHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCC-CcEEEEe-cCccCCCCCCCccEE
Q 013393 39 LNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVL-GTKRLPYPSRSFELA 112 (444)
Q Consensus 39 L~~g~~~~rVLDVGCGtG~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~-~~~~~~~-d~~~lp~~~~sFDlI 112 (444)
+++++ +|||+||++|.|+.+.+.. .|.|+|+-+....+.+ ..+..|- .+.|... |...++ ..++|.|
T Consensus 76 l~~g~---~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~--~~~s~gwn~v~fk~gvDv~~~~--~~~~Dtl 148 (267)
T 3p8z_A 76 VIPEG---RVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV--PMSTYGWNIVKLMSGKDVFYLP--PEKCDTL 148 (267)
T ss_dssp SCCCE---EEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC--CCCCTTTTSEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCC---EEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc--hhhhcCcCceEEEeccceeecC--CccccEE
Confidence 34555 8999999999999988763 5788888775432111 1111222 3456655 655554 3669999
Q ss_pred EeccccccccccH----H---HHHHHHHhhcCCCeEEEEEcCCCC
Q 013393 113 HCSRCRIDWLQRD----G---ILLLELDRLLRPGGYFVYSSPEAY 150 (444)
Q Consensus 113 ~~~~~~l~~~~d~----~---~~L~ei~rvLkPGG~lvis~p~~~ 150 (444)
+|-.. +-.+++ . +.|.-+.+.|++ |-|++-.-.++
T Consensus 149 lcDIg--eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 149 LCDIG--ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred EEecC--CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 99652 222222 1 356666788998 78887655543
No 304
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.83 E-value=0.0032 Score=60.92 Aligned_cols=153 Identities=13% Similarity=0.042 Sum_probs=92.8
Q ss_pred HHHHHHHHHhhhhccCCceeEEEecccccchhhhhcc--CCCceEEEeccccC-CCchhHHh----hccc---ccccccc
Q 013393 271 VRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALK--DKDVWVMNVAPVRM-SARLKIIY----DRGL---IGTVHDW 340 (444)
Q Consensus 271 ~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~--~~~~wv~~~~~~~~-~~~l~~~~----~rg~---~~~~~~~ 340 (444)
++...|...+...+..+ ..|+|+.++.|.++..|. ..|-. +|+-++- +..+...- +.|+ +-+++.=
T Consensus 103 ~~~~~~~~~l~~~l~~~--~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 178 (305)
T 3ocj_A 103 ERHGHFRRALQRHLRPG--CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQD 178 (305)
T ss_dssp HHHHHHHHHHHHHCCTT--CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECC
T ss_pred HHHHHHHHHHHhhCCCC--CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECc
Confidence 33333444443334333 479999999999999983 33332 4555553 34444333 3333 2233322
Q ss_pred ccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH---------------------------
Q 013393 341 CESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------------------------- 393 (444)
Q Consensus 341 ~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~--------------------------- 393 (444)
.+.++ +|.+||+|.+.+++.... +.-....++-|+-|+|||||.+++.+-.
T Consensus 179 ~~~~~-~~~~fD~v~~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 256 (305)
T 3ocj_A 179 AWKLD-TREGYDLLTSNGLNIYEP-DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLV 256 (305)
T ss_dssp GGGCC-CCSCEEEEECCSSGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHH
T ss_pred hhcCC-ccCCeEEEEECChhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhH
Confidence 23333 359999999998887332 2122334799999999999999997711
Q ss_pred ------------HHHHHHHHHHhhccceeEEeccccccCCCCCCCceEEEEEec
Q 013393 394 ------------SIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 394 ------------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
...++++++++.-.++.... +... .+.-..++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~--~~~~----~~~~~~v~a~Kp 304 (305)
T 3ocj_A 257 FTRLIQPRWNALRTHAQTRAQLEEAGFTDLRF--EDDR----ARLFPTVIARKP 304 (305)
T ss_dssp HHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEE--ECCT----TSSSCEEEEECC
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHCCCEEEEE--Eccc----CceeeEEEEecC
Confidence 24778889999888987422 1111 123568888884
No 305
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.81 E-value=0.0024 Score=58.81 Aligned_cols=117 Identities=10% Similarity=0.137 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc-cccccccccCC
Q 013393 267 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL-IGTVHDWCESF 344 (444)
Q Consensus 267 ~~w~~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~-~~~~~~~~~~~ 344 (444)
..|.+..+.+...+...+ ..-..|+|+.++.|.++..|...-. +|+-++. +..+...-++.- +-+.+.=.+.+
T Consensus 21 ~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDF 95 (239)
T ss_dssp CCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTC
T ss_pred hhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHc
Confidence 456666665555555434 3346899999999999998875421 4555554 344444444310 22222222334
Q ss_pred CCCCcccchhhc-cccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 345 STYPRTYDLLHA-WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 345 ~~y~~~~dl~h~-~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+. +.+||+|.+ .+++..+. ..-+...+|-++-|+|+|||.+++.
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLK-TTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCC-SHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc-CCCCcEEEEcCchHhhcC-CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 44 789999994 44666332 1124678999999999999999996
No 306
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.81 E-value=0.0031 Score=58.11 Aligned_cols=94 Identities=14% Similarity=0.228 Sum_probs=63.0
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc-cccccccccCCCCCCcccchhhccc-cccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-IGTVHDWCESFSTYPRTYDLLHAWK-VFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~-~~~~~~~~~~~~~y~~~~dl~h~~~-~~~~ 362 (444)
..|+|+.++.|.++..|... .+|+-++- +..+...-++ |. +-..+.=.+.++ .|.+||+|-+.. ++..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-LPEPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-CSSCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-CCCCcCEEEEeCCchhh
Confidence 68999999999999999876 36666664 3444443332 21 222222122333 468999999875 6663
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEE
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
+. ..-+...+|-++-|+|+|||.+++
T Consensus 110 ~~-~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 110 LQ-TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CC-SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 32 223467889999999999999998
No 307
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.78 E-value=0.00057 Score=66.02 Aligned_cols=97 Identities=10% Similarity=0.180 Sum_probs=67.4
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh----cccc---ccc-cccccCCCCCCcccchhhcc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RGLI---GTV-HDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~----rg~~---~~~-~~~~~~~~~y~~~~dl~h~~ 357 (444)
.-..|+|+.+|.|+++..|... + .+|+-++- +..+...-+ .|+- -+. .|.. .+ +.+||+|.+.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~ 144 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSL 144 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEc
Confidence 3457999999999999998765 5 25555553 355554433 3542 122 2332 33 8999999999
Q ss_pred cccccccc-----CCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEE-----RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~-----~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++|..... ..-....++-|+-|+|+|||.++|.+
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99875422 12346789999999999999999964
No 308
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.75 E-value=0.0014 Score=59.61 Aligned_cols=104 Identities=16% Similarity=0.223 Sum_probs=71.6
Q ss_pred hccCCceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhc----cccccccccccCCCCCCcccchhhcc
Q 013393 283 VAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 283 ~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~r----g~~~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
.+....-..|+|+.++.|.++..|...- .+|+-++-. ..+...-++ +-+-+++.=.+.++ -+.+||+|.+.
T Consensus 46 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 121 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVA 121 (216)
T ss_dssp HTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEE
T ss_pred HcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEc
Confidence 3556667899999999999999998752 367666643 444444333 22333333334444 46899999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++|..+. +.-.+..+|-++-|+|+|||.+++-+
T Consensus 122 ~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 122 EVLYYLE-DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SCGGGSS-SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cHHHhCC-CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9887443 11234577999999999999999943
No 309
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.73 E-value=0.0085 Score=63.02 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=73.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEECCCcchHHHHHhh-----------------CCceEEEcCcccchHHHHHH
Q 013393 22 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQF 84 (444)
Q Consensus 22 ~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGCGtG~~a~~La~-----------------~~V~gvdis~~dis~a~i~~ 84 (444)
...++.+.+++.. .+ ..+|+|-.||+|.|.....+ ..+.|.|+.+....-+..+.
T Consensus 203 ~~Vv~lmv~l~~p-----~~---~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 203 RPVVRFMVEVMDP-----QL---GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp HHHHHHHHHHHCC-----CT---TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcc-----CC---CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 3456666777642 12 23799999999998765532 24778888776655554444
Q ss_pred HHHcCCCcEEEEecCccCCC----CCCCccEEEeccccc-cc-------------ccc-HHHHHHHHHhhcC-------C
Q 013393 85 ALERGIPSTLGVLGTKRLPY----PSRSFELAHCSRCRI-DW-------------LQR-DGILLLELDRLLR-------P 138 (444)
Q Consensus 85 a~e~~~~~~~~~~d~~~lp~----~~~sFDlI~~~~~~l-~~-------------~~d-~~~~L~ei~rvLk-------P 138 (444)
....-....+...|....|. +...||+|+++--.- .+ ..+ .-.++..+.+.|| |
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 43322334566666554442 235799999974110 00 011 1246777888887 7
Q ss_pred CeEEEEEcCC
Q 013393 139 GGYFVYSSPE 148 (444)
Q Consensus 139 GG~lvis~p~ 148 (444)
||++.+..|.
T Consensus 355 gGr~avVlP~ 364 (530)
T 3ufb_A 355 GGRAAVVVPN 364 (530)
T ss_dssp CCEEEEEEEH
T ss_pred CceEEEEecc
Confidence 9999998775
No 310
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.71 E-value=0.0023 Score=58.95 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=63.6
Q ss_pred EEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc--ccccccccccCCCCCCcccchhhccccccccccCC
Q 013393 291 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG--LIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 367 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg--~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~ 367 (444)
.|+|+.++.|.++..|.+.-. +|+=++- +..+...-++- -+-..+.-.+.+ ..+.+||+|++.+++.++.
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~--- 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID--- 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS---
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc---
Confidence 599999999999999976522 4554553 24444433331 122222222233 2468999999999988543
Q ss_pred CChhhhhhhhc-ccccCCcEEEEec
Q 013393 368 CSFEDLLIEMD-RMLRPEGFVIIRD 391 (444)
Q Consensus 368 c~~~~~~~e~d-rilrp~g~~~~rd 391 (444)
+...+|-|+- |+|+|||.+++.+
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 3688999999 9999999999965
No 311
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.69 E-value=0.0011 Score=60.28 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=80.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc-cccccccccccCCCCCCcccchhhccccccccccCC
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 367 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r-g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~ 367 (444)
..|+|+.++.|.++..|.+... +|+-++- +..+...-++ ++--...|. +.++ .+.+||+|.+.+++..+. .
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~--~ 117 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVP--R 117 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSC--H
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcC--H
Confidence 4799999999999999976632 5666664 3455555444 332222332 3344 578999999999887443 1
Q ss_pred CChhhhhhhhcccccCCcEEEEeccH---------------HHHHHHHHHHhhcc-ceeE
Q 013393 368 CSFEDLLIEMDRMLRPEGFVIIRDKS---------------SIINYIRKFITALK-WDGW 411 (444)
Q Consensus 368 c~~~~~~~e~drilrp~g~~~~rd~~---------------~~~~~~~~~~~~~~-w~~~ 411 (444)
-+...+|-|+-|+|+|||.+++.... -..+++++++..-. ++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 24678999999999999999995221 14677888888877 7764
No 312
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=96.68 E-value=0.00047 Score=69.92 Aligned_cols=140 Identities=9% Similarity=0.110 Sum_probs=94.9
Q ss_pred hHhhHHHHHHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcccccccc----c
Q 013393 265 DIGIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGTVH----D 339 (444)
Q Consensus 265 ~~~~w~~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~~~~~----~ 339 (444)
....|.+....+...+...+.-..-..|+|+.++.|.++..|.+... +|+=++- ++.+...-++|+-.... +
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 160 (416)
T 4e2x_A 84 GSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKA 160 (416)
T ss_dssp GCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechh
Confidence 34556666666655554445444456899999999999999987643 5666664 36677777776422211 1
Q ss_pred cccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH--------------------HHHHHH
Q 013393 340 WCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------------------SIINYI 399 (444)
Q Consensus 340 ~~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~--------------------~~~~~~ 399 (444)
-.+.++.-+.+||+|.+.++|.++. +...+|-|+-|+|+|||.+++.... -..+.+
T Consensus 161 ~~~~l~~~~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 236 (416)
T 4e2x_A 161 TADDVRRTEGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSV 236 (416)
T ss_dssp HHHHHHHHHCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHH
T ss_pred hHhhcccCCCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHH
Confidence 1122222248999999999998653 5899999999999999999996421 112567
Q ss_pred HHHHhhccceeE
Q 013393 400 RKFITALKWDGW 411 (444)
Q Consensus 400 ~~~~~~~~w~~~ 411 (444)
+.++..-.+++.
T Consensus 237 ~~ll~~aGf~~~ 248 (416)
T 4e2x_A 237 QGMAQRCGFELV 248 (416)
T ss_dssp HHHHHHTTEEEE
T ss_pred HHHHHHcCCEEE
Confidence 788887777763
No 313
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.68 E-value=0.0056 Score=56.44 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=87.3
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc---cccc-cccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL---IGTV-HDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~---~~~~-~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|.++..|..... +|+=++- +..+...-++ |+ +-++ .|..+ ++ .+.+||+|.+.++|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 3899999999999999976432 4555553 3444433332 22 1122 23333 22 34689999999988
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEeccH-----------HHHHHHHHHHhhccceeEEeccccccCCCCCCCceE
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-----------SIINYIRKFITALKWDGWLSEVEPRIDALSSSEERV 429 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-----------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 429 (444)
..+. .-....++-++-|+|+|||.+++-+.. -..+++++++..-.|+..........-+...+.|++
T Consensus 143 ~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~~ 220 (235)
T 3lcc_A 143 CAIE--PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKL 220 (235)
T ss_dssp TTSC--GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCEE
T ss_pred hcCC--HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCccccccCHHHH
Confidence 7442 235788999999999999999984321 135788899998889875333223333333455555
Q ss_pred EEEE
Q 013393 430 LIAK 433 (444)
Q Consensus 430 l~~~ 433 (444)
-..+
T Consensus 221 ~~~~ 224 (235)
T 3lcc_A 221 GRWK 224 (235)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 4443
No 314
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.67 E-value=0.0061 Score=54.91 Aligned_cols=95 Identities=17% Similarity=0.185 Sum_probs=67.5
Q ss_pred EEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc---cccccccccCCCCCCcccchhhccccccc
Q 013393 291 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL---IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~---~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
.|+|+.++.|.++..|...+- .+|+-++- +..+...-++ |+ +-.++.=.+.++.-+.+||+|.+.+++..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 899999999999999977533 35666664 3444443333 43 22333333444444589999999998874
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
. -+...+|-|+-|+|+|||.+++.+
T Consensus 124 ~----~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 124 W----EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp C----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c----cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 4 247889999999999999999964
No 315
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.67 E-value=0.001 Score=63.02 Aligned_cols=99 Identities=14% Similarity=0.280 Sum_probs=66.7
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc----cc--cccccccccCCCCCCcccchhhccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR----GL--IGTVHDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r----g~--~~~~~~~~~~~~~y~~~~dl~h~~~ 358 (444)
..-..|+|+.++.|.++..|... |. .+|+-++. +..+...-++ |+ +-....=.+.++.-+.+||+|++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPD--AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 34458999999999999888653 21 13444443 3444433322 43 2223322334454468999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++..+. +...+|-++-|+|+|||++++.+
T Consensus 114 ~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 114 VLEHLQ----SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcC----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 988442 36789999999999999999965
No 316
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.66 E-value=0.0052 Score=59.66 Aligned_cols=134 Identities=13% Similarity=0.136 Sum_probs=87.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc--cccc---c-cccc-ccCCCCCCcccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR--GLIG---T-VHDW-CESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r--g~~~---~-~~~~-~~~~~~y~~~~dl~h~~~~~~ 361 (444)
+.++|+.++-|+|+..|...+. -.|+-+|- ++.|..-..+ .++. + .... -+.++ ..+||++-++-.|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~--~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFT--EGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCT--TCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCC--CCCCCEEEEEeeHh
Confidence 5799999999999988865432 24555663 4666552221 1110 0 1111 12233 23599999988776
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEe---------c-------------cHHHHHHHHHHHhhccceeEEecccccc
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIR---------D-------------KSSIINYIRKFITALKWDGWLSEVEPRI 419 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~r---------d-------------~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 419 (444)
++..+|-|+-|+|+|||.+++= + ....++++...+....|.+...+..+-.
T Consensus 163 -------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 163 -------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp -------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred -------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 2588999999999999999772 1 1247888999999999998655444444
Q ss_pred CCCCCCCceEEEEEec
Q 013393 420 DALSSSEERVLIAKKK 435 (444)
Q Consensus 420 ~~~~~~~~~~l~~~k~ 435 (444)
|+. .+.|=++.++|.
T Consensus 236 g~~-gn~e~l~~~~~~ 250 (291)
T 3hp7_A 236 GGH-GNIEFLAHLEKT 250 (291)
T ss_dssp CGG-GCCCEEEEEEEC
T ss_pred CCC-cCHHHHHHhhhc
Confidence 432 345777777763
No 317
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.65 E-value=0.001 Score=64.62 Aligned_cols=99 Identities=10% Similarity=0.192 Sum_probs=66.6
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc----cccccccccccCCCCCCcccchhhcccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r----g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
.-..|+|+.++.|+++..|.+. .. +|+-++- +..+...-++ |+-....-.+..+...|.+||+|.+.++|.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFE 166 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHH
Confidence 3357999999999999888754 32 5555554 3455544433 542211112222233468999999999887
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.... -+...++-|+-|+|+|||.+++.+
T Consensus 167 ~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 167 HFGH--ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp GTCG--GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4421 247889999999999999999854
No 318
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.63 E-value=0.0007 Score=62.96 Aligned_cols=93 Identities=17% Similarity=0.271 Sum_probs=65.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcccccccc-cccc---CCCCCCcccchhhccccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGTVH-DWCE---SFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~~~~~-~~~~---~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
..|+|+.++.|.++..|.+... +|+-++- +..+...-++ +-..+ |-.+ +|+ +.+||+|.+.+++..+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~--~~~fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLP--DKYLDGVMISHFVEHLD 115 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSC--TTCBSEEEEESCGGGSC
T ss_pred CeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcC--CCCeeEEEECCchhhCC
Confidence 5799999999999998876432 4455553 3555555555 22222 2222 333 48999999999998553
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEec
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
. -++..+|-|+-|+|+|||.+++..
T Consensus 116 ~--~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 116 P--ERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp G--GGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred c--HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2 247899999999999999999953
No 319
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.63 E-value=0.0015 Score=61.78 Aligned_cols=115 Identities=18% Similarity=0.211 Sum_probs=78.8
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc---cccccccccCCCCCCcccchhhccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL---IGTVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
-..|+|+.+|.|.++..|.+.+- .+|+-++- +..+...-+ .|+ +-+.+.=.+.++.-+.+||+|.+.+++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 45899999999999999987643 14444443 344444333 343 223333334555446899999999998
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEeccH---------------------HHHHHHHHHHhhcccee
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------------SIINYIRKFITALKWDG 410 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~---------------------~~~~~~~~~~~~~~w~~ 410 (444)
... +...++-++-|+|+|||.+++.+.. ....++.+++..-.++.
T Consensus 125 ~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 125 YNI-----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp GGT-----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred eec-----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 743 4789999999999999999996521 12456677777777775
No 320
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=96.61 E-value=0.00092 Score=63.70 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=64.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccccccccccccCCCCCCcccchhhccccccccccCCC
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERGC 368 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c 368 (444)
..|+|..+|-|.++..|.+.- -+|+-+|-. ..|...-.+.=|-..+.=.|.++.=+.+||+|.+...|. . .
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h-~----~ 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMH-W----F 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCT-T----C
T ss_pred CCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehh-H----h
Confidence 369999999999999998653 245555532 333322222223334444566666679999999988875 2 3
Q ss_pred ChhhhhhhhcccccCCcEEEE
Q 013393 369 SFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 369 ~~~~~~~e~drilrp~g~~~~ 389 (444)
+....+-|+-|+|||||.+++
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEE
Confidence 578899999999999999877
No 321
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.55 E-value=0.0023 Score=60.12 Aligned_cols=98 Identities=16% Similarity=0.205 Sum_probs=66.4
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc--cccccccccCCCCCCcccchhhcccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL--IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
..-..|+|+.++-|.++..|...-- +|+-++. +.-+...-+ +|+ +-....=.+.++.-+.+||+|.+..+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 3456899999999999998876421 5666664 344444332 343 22222122334433589999999988
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+-.+. +...+|-|+-|+|||||.+++.|
T Consensus 113 l~~~~----d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 113 AHHFP----NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhcC----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 87432 47899999999999999999964
No 322
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.54 E-value=0.003 Score=58.64 Aligned_cols=120 Identities=17% Similarity=0.228 Sum_probs=78.6
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc------ccccccccccCCCCCCcccchhhccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG------LIGTVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg------~~~~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
.-..|+|+.++.|.++..|...- ..+|+-++- +..+...-++. -+-+++.=.+.++.-+.+||+|.+..++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 35689999999999999887653 124555553 23343332221 0112222233445445689999999988
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEeccH---------------HHHHHHHHHHhhccceeE
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~---------------~~~~~~~~~~~~~~w~~~ 411 (444)
..+... .+..+|-|+-|+|+|||.+++.|.. ...+++++++....++..
T Consensus 157 ~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 157 GHLTDQ--HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GGSCHH--HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hhCCHH--HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 744321 2568999999999999999996531 136778888888888764
No 323
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.54 E-value=0.0022 Score=61.45 Aligned_cols=96 Identities=22% Similarity=0.288 Sum_probs=66.6
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHh----hccc---cccccccccCCCCCCcccchhhcccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIY----DRGL---IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~----~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
-..|+|+.++.|.++..|... +. +|+-++- +..+...- +.|+ +-+.+.-.+.++.-+.+||+|.+.++
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 358999999999999988764 32 5666654 34444333 2344 22222222334433589999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+.++. +...+|-|+-|+|||||.+++.+
T Consensus 160 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 160 FLHSP----DKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcC----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 88543 27899999999999999999975
No 324
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.54 E-value=0.0024 Score=60.30 Aligned_cols=98 Identities=21% Similarity=0.274 Sum_probs=65.0
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc---cccccccccCCCCCCcccchhhcccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL---IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
.-..|+|+.++.|.++..|....- .+|+-++- +..+...-+ .|+ +-+.+.--+.++.-+.+||+|.+.++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 345899999999999988864311 24555553 244443332 354 22222222233433479999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
|.... +...+|-|+-|+|+|||.+++.+
T Consensus 139 l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 139 LHHMP----DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TTTSS----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhCC----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 88442 36889999999999999999965
No 325
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.54 E-value=0.0029 Score=56.87 Aligned_cols=118 Identities=12% Similarity=0.155 Sum_probs=82.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc-cccccccccCCCCCCcccchhhccccccccccCC
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL-IGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 367 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~ 367 (444)
..|+|+.++.|.++..|..... +|+-++- +..+...-++.- +-+.+.=.+.++.-+.+||+|.+.++|..+. .
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~ 117 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG--P 117 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC--T
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC--H
Confidence 4799999999999999976532 4555553 344555444421 1122222233444458999999999887543 2
Q ss_pred CChhhhhhhhcccccCCcEEEEeccH----------------HHHHHHHHHHhhccceeEE
Q 013393 368 CSFEDLLIEMDRMLRPEGFVIIRDKS----------------SIINYIRKFITALKWDGWL 412 (444)
Q Consensus 368 c~~~~~~~e~drilrp~g~~~~rd~~----------------~~~~~~~~~~~~~~w~~~~ 412 (444)
-+...+|-++-|+|+|||.+++.+.. ...+++++++....|++..
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 36889999999999999999996521 2368889999999999854
No 326
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.53 E-value=0.0075 Score=60.75 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=62.8
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHH----hhccc-cccccccccCCCCCCcccchhhccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKII----YDRGL-IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~----~~rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
-..|+|+.++.|.++..|..... +|+=++. +..+... -..|+ +-+++.=++.+..=+.+||+|-++..|..
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 34899999999999998876532 5555553 2333322 12232 22333333333221379999999888763
Q ss_pred ccc-CCCChhhhhhhhcccccCCcEEEEec
Q 013393 363 IEE-RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 363 ~~~-~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
... ..-....++-++-|+|+|||.++|--
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 111 11235678889999999999999853
No 327
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.52 E-value=0.0049 Score=53.66 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=85.2
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc--cccccccccccCCCCCCcccchhhccccccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR--GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r--g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
.-..|+|+.++.|.++..|.+.- -+|+-++- +..+...-++ .+--...| .+.-+.+||++.+..++....
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc
Confidence 34689999999999999998764 16666664 3555555444 11111222 333357999999999988442
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEeccHH-------------HHHHHHHHHhhccceeEEeccccccCCCCCCCceEEE
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRDKSS-------------IINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLI 431 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd~~~-------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~ 431 (444)
+...++-|+-|+|+|||.+++.+-.. ..++++++++ .|+.... .+ .. ...-.|+
T Consensus 90 ----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~-~~--~~----~~~~~l~ 156 (170)
T 3i9f_A 90 ----DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKR-FN--PT----PYHFGLV 156 (170)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEE-EC--SS----TTEEEEE
T ss_pred ----CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEc-cC--CC----CceEEEE
Confidence 47899999999999999999964321 2456777777 7775321 11 11 1356777
Q ss_pred EEecc
Q 013393 432 AKKKL 436 (444)
Q Consensus 432 ~~k~~ 436 (444)
+.|+=
T Consensus 157 ~~~~~ 161 (170)
T 3i9f_A 157 LKRKT 161 (170)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 77653
No 328
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.50 E-value=0.0033 Score=58.75 Aligned_cols=96 Identities=14% Similarity=0.208 Sum_probs=65.5
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc--c-c--cccccccccCCCCCCcccchhhcccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR--G-L--IGTVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r--g-~--~~~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
.-..|+|+.++.|.++..|.+.. .+|+-++- +..+...-++ + . +-..+.=.+.++.-+.+||+|++..+|.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 34689999999999999998763 35555553 3444444333 1 1 1122222244453357999999998887
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
... +...++-|+-|+|+|||.+++.
T Consensus 116 ~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 432 4788999999999999999884
No 329
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.49 E-value=0.0026 Score=60.06 Aligned_cols=97 Identities=16% Similarity=0.253 Sum_probs=66.1
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccccccccccccCCCCCCcccchhhcccccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
..-..|+|+.++.|.++..|.+... +|+=++-. ..+...-.+.-+-..+.=++.++.-+.+||+||+.+++..+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-- 107 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHF-- 107 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGC--
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhc--
Confidence 3446899999999999999987432 44444432 22222222222333333445566556899999999988744
Q ss_pred CCCChhhhhhhhcccccCCcEEEEec
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
-+...++-|+-|+|| ||++++-+
T Consensus 108 --~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 108 --SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp --SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred --cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 357899999999999 99877743
No 330
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.49 E-value=0.0076 Score=54.30 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=77.0
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccccccccccccCCCCCCcccchhhccccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
..|+|+.++.|.++..|...+. .+|+-++. +..+...-+ .|+-.+---.+..++..+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 4899999999999999876653 24555554 344443333 24422222222233345699999999876652
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhccceeE
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGW 411 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~w~~~ 411 (444)
+..++-++-|+|+|||.+++.+ .....+.+.+++....++..
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQID 180 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEE
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceE
Confidence 5788999999999999999863 34446777788887777764
No 331
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.43 E-value=0.0028 Score=58.95 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=68.3
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHh----hccc--cccccccccCCCCCCcccchhhcccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIY----DRGL--IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~----~rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
..-..|+|+.++.|.++.+|...-. +|+-++- +..+...- ++|+ +-+.+.-.+.++.-+.+||+|.+..+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 3446899999999999998876432 5666664 34444332 2343 23333334556654589999999988
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+..+. +...+|-|+-|+|+|||.+++-|
T Consensus 97 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 AHHFS----DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87432 47899999999999999999964
No 332
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.43 E-value=0.0018 Score=60.51 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=63.7
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHH----hhccc---cccccccccCCCCCCcccchhhcccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKII----YDRGL---IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~----~~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
-..|+|+.++.|.++..|... .. +|+-++- +..+... -+.|+ +-+.+.=.+.++. +.+||+|.+.++
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 348999999999999888643 21 4444443 3344433 23354 2222222233444 799999999887
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+-... +...+|-|+-|+|||||.+++.+
T Consensus 113 ~~~~~----~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 113 TWIAG----GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GGGTS----SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred hHhcC----CHHHHHHHHHHHcCCCeEEEEec
Confidence 76332 47889999999999999999965
No 333
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.42 E-value=0.001 Score=62.12 Aligned_cols=113 Identities=16% Similarity=0.258 Sum_probs=77.8
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHH----hhccc---cccccccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKII----YDRGL---IGTVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~----~~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|.++..|... +. +|+-++- +..+... -+.|+ +-+.+.=.+.++.-+.+||+|++.+++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 48999999999999888654 32 5555554 3444443 23344 222332235555445899999999988
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEeccH---------------------HHHHHHHHHHhhcccee
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------------SIINYIRKFITALKWDG 410 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~---------------------~~~~~~~~~~~~~~w~~ 410 (444)
... +...+|-++-|+|||||.+++.+.. ....++.+++..-.++.
T Consensus 125 ~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (257)
T 3f4k_A 125 YNI-----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTP 190 (257)
T ss_dssp CCC-----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEE
T ss_pred hhc-----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeE
Confidence 743 5789999999999999999997621 12456677777777765
No 334
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.39 E-value=0.011 Score=51.53 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=77.3
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh----ccc---cccccccccCCCCCCcccchhhcc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RGL---IGTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~----rg~---~~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
..-..|+|+.++.|.++..+... |. .+|+-++- +..+...-+ .|+ +-+..|..+.|+..+.+||+|.++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 34468999999999999988654 32 24444443 234444332 243 222334556666655899999988
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEecc-HHHHHHHHHHHhhccceeE
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~-~~~~~~~~~~~~~~~w~~~ 411 (444)
+.+.. ..++-++-|+|+|||.+++-+. .+-...+..+++...++..
T Consensus 102 ~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 102 GGLTA--------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp C-TTC--------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred CcccH--------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 77652 6789999999999999999653 4566677777777766654
No 335
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.37 E-value=0.0025 Score=61.04 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=66.5
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh----ccc-cccccccccCCCCCCcccchhhcccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RGL-IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~----rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
..-.+|+|+.++.|.++..|.+. |- --+|+-++- +..+...-+ .|+ +-+.+.=++.++ +|.+||+||+..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPE-GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCT-TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-cCCCeeEEEECCh
Confidence 44568999999999999999764 21 013333442 233332222 221 222333333444 3789999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEeccH
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 393 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~ 393 (444)
+.... +...++-++-|+|+|||++++.+..
T Consensus 99 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88442 4689999999999999999987654
No 336
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.32 E-value=0.0057 Score=55.59 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=78.1
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc--cccccccccCCCCCCcccchhhccccccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL--IGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
.-..|+|+.++.|.++..|.... .+|+-++- +..+...-++-- +-+.+.=.+.++. |.+||+|.+.++|..+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEV-PTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCC-CSCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCC-CCCeEEEEECcchhcCC
Confidence 34589999999999999997653 25555554 344444444311 2222222233332 38999999999888443
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEeccH----H---------------------------HHHHHHHHHhhccceeEE
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRDKS----S---------------------------IINYIRKFITALKWDGWL 412 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd~~----~---------------------------~~~~~~~~~~~~~w~~~~ 412 (444)
.. ....+|-|+-|+|+|||.+++.+.. . ..++++++++.-.+++..
T Consensus 121 ~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 121 DD--EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp HH--HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred hH--HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 21 1234899999999999999997511 1 236778888888888753
No 337
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.31 E-value=0.0038 Score=56.78 Aligned_cols=97 Identities=12% Similarity=0.182 Sum_probs=66.7
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccccccc-cccccC-CCCCCcccchhhcccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTV-HDWCES-FSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~~~~~-~~~~~~-~~~y~~~~dl~h~~~~~~~~ 363 (444)
..-..|+|+.++.|.++..|...+ .+|+-++-. ..+...-++. .-+. .|..+. .+.-+.+||+|.+.+++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~ 106 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL 106 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEESCGGGS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECChhhhc
Confidence 344689999999999999998875 356666643 4444444332 1122 233321 22224899999999988744
Q ss_pred ccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 364 EERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 364 ~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
. +...++-++-|+|+|||.+++..
T Consensus 107 ~----~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 107 F----DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp S----CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred C----CHHHHHHHHHHHcCCCCEEEEEe
Confidence 3 36799999999999999999953
No 338
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.29 E-value=0.004 Score=54.92 Aligned_cols=115 Identities=15% Similarity=0.206 Sum_probs=73.4
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc----c-ccccccccCCCCCCcccchhhcc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL----I-GTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~----~-~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
.-..|+|+.++.|.++..+... .-+|+-++. +..+...-++ |+ + -+..|..+.++ +.+||+|.++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 3458999999999999888765 235555553 2344433322 33 2 23345555444 6799999998
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEeccH-HHHHHHHHHHhhcccee
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWDG 410 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-~~~~~~~~~~~~~~w~~ 410 (444)
..|.... -....++-++-|+|+|||.+++-+.. ....++.+.++..-+++
T Consensus 127 ~~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~ 177 (194)
T 1dus_A 127 PPIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNV 177 (194)
T ss_dssp CCSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCC
T ss_pred CCcccch---hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcce
Confidence 8765211 23678899999999999999886543 33444555555553344
No 339
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.28 E-value=0.0039 Score=59.25 Aligned_cols=95 Identities=8% Similarity=0.112 Sum_probs=65.1
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc-ccccccccccCCCCCCcccchhhcccccccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG-LIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg-~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
.-..|+|+.++.|.++..|.+... +|+-++- +..+...-++. =+-..+.=.+.++ ++.+||+|++..++..+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~- 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVK- 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCS-
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCc-
Confidence 345899999999999999876322 4555553 34444443331 1222222234455 489999999999887432
Q ss_pred CCCChhhhhhhhcccccCCcEEEEe
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+...+|-|+-|+|||||.+++.
T Consensus 132 ---d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 132 ---EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHhcCCCcEEEEE
Confidence 4788999999999999999995
No 340
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.28 E-value=0.0037 Score=56.78 Aligned_cols=134 Identities=15% Similarity=0.116 Sum_probs=85.7
Q ss_pred eeEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc----cc--cccccccccCCCCCCcccchhhcccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR----GL--IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r----g~--~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
-..|+|+.++.|.++.+|... |-. .|+-++. +..+...-++ |+ +-+.+.=.+.++.-+.+||+|.+.++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 348999999999999988642 211 3444543 2344433222 32 22222222334444578999999999
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEecc-------------HHHHHHHHHHHhhccceeEEeccccccCCCCCCC
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-------------SSIINYIRKFITALKWDGWLSEVEPRIDALSSSE 426 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~-------------~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 426 (444)
+..+. +...+|-|+-|+|+|||.+++-+- ....+++++++..-.++.... .+ .. ..
T Consensus 116 l~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~-~~--~~----~~ 184 (219)
T 3dh0_A 116 FHELS----EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV-VE--VG----KY 184 (219)
T ss_dssp GGGCS----SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE-EE--ET----TT
T ss_pred hhhcC----CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE-Ee--eC----Cc
Confidence 88442 478899999999999999999652 123578888888888886322 11 11 13
Q ss_pred ceEEEEEec
Q 013393 427 ERVLIAKKK 435 (444)
Q Consensus 427 ~~~l~~~k~ 435 (444)
..+++++|+
T Consensus 185 ~~~~~~~k~ 193 (219)
T 3dh0_A 185 CFGVYAMIV 193 (219)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEec
Confidence 567777775
No 341
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.27 E-value=0.0065 Score=55.49 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=76.4
Q ss_pred eeEEEecccccchhhhhccCCCceEEEecccc-CCCchhHHhhccccccccccccCCCCCCcccchhhccccccccccCC
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVR-MSARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 367 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~-~~~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~ 367 (444)
-..|+|+.++.|.++..|... +-++ ++..+...-++++ -++..-.+.++.-+.+||+|.+.+++..+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGV-FVLKGTAENLPLKDESFDFALMVTTICFVD--- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTC-EEEECBTTBCCSCTTCEEEEEEESCGGGSS---
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCC-EEEEcccccCCCCCCCeeEEEEcchHhhcc---
Confidence 348999999999999999876 2223 2344555555543 222222334454357999999999887442
Q ss_pred CChhhhhhhhcccccCCcEEEEeccH------------------------HHHHHHHHHHhhccceeE
Q 013393 368 CSFEDLLIEMDRMLRPEGFVIIRDKS------------------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 368 c~~~~~~~e~drilrp~g~~~~rd~~------------------------~~~~~~~~~~~~~~w~~~ 411 (444)
+...+|-++-|+|+|||.+++.+.. -..+++++++....++..
T Consensus 117 -~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 117 -DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 4688999999999999999995321 134677888887777764
No 342
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.26 E-value=0.0019 Score=60.35 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=69.3
Q ss_pred cCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc----ccc-cccccccCCCCCCcccchhhccc
Q 013393 285 QKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG----LIG-TVHDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 285 ~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg----~~~-~~~~~~~~~~~y~~~~dl~h~~~ 358 (444)
.-..-..|+|+.++.|.++..|.+.- -.+|+-++- +..+...-++. -+- +..|..+ ++.-+.+||+|++.+
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRD 128 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHH
Confidence 33344589999999999999887641 125555553 34555554443 122 2234333 344468999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++..+. .-+...+|-|+-|+|||||.+++.+
T Consensus 129 ~l~~~~--~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALS--LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcC--hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 888542 1247889999999999999999975
No 343
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.25 E-value=0.0042 Score=57.26 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=79.8
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc---cccccccccCCCCCCcccchhhcccccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL---IGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
..|+|+.++.|.++..|..... +|+-++- +..+...-+++. +-..+.-.+.++.-+.+||+|.+.++|.+..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE- 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS-
T ss_pred CeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc-
Confidence 3899999999999999987632 5555553 355555555532 2222222334454468999999999988542
Q ss_pred CCCChhhhhhhhcccccCCcEEEEeccH----------------------HHHHHHHHHHhhccceeE
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd~~----------------------~~~~~~~~~~~~~~w~~~ 411 (444)
+...+|-++-|+|+|||.++|.+.. ....+++.++..-.+++.
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 4678999999999999999996511 123467777887777764
No 344
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.22 E-value=0.0035 Score=58.47 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=70.2
Q ss_pred hhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc---cccccccccCCCCCCcccchhhcc
Q 013393 282 TVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL---IGTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 282 ~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~---~~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
..+....-..|+|+.++.|.++..|.....- +|+-++- +..+...-++.- +-....=.+.++.-+.+||+|.+.
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSS 115 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEE
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEc
Confidence 3344445568999999999999998765321 5555554 344444444421 122222223455445899999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
++|..+ -+...+|-|+-|+|+|||.+++.
T Consensus 116 ~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 116 LALHYI----ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp SCGGGC----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhh----hhHHHHHHHHHHHcCCCcEEEEE
Confidence 988854 24789999999999999999996
No 345
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.21 E-value=0.0042 Score=56.19 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=65.0
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhcc-ccccccccccCCCCCCcccchhhcccccccccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG-LIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg-~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
.-..|+|+.++.|.++..| .. -+|+-++-. ..+...-++. -+-+.+.-.+.++.-+.+||+|.+.+++....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PY----PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CC----SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCCeEEEECCCCCHhHHhC-CC----CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC-
Confidence 3458999999999999998 32 145555532 4444444441 12223333344554457999999999887442
Q ss_pred CCCChhhhhhhhcccccCCcEEEEec
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+...+|-|+-|+|+|||.+++-+
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 ---DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 57899999999999999999964
No 346
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=96.21 E-value=0.00086 Score=64.19 Aligned_cols=100 Identities=17% Similarity=0.288 Sum_probs=66.3
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----ccccc-------ccccccCCC---CCCcccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GLIGT-------VHDWCESFS---TYPRTYD 352 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~~~~-------~~~~~~~~~---~y~~~~d 352 (444)
.-..|+|+.+|.|.++..|.+... +|+-++- +..+...-++ +.-+. --|+.+ ++ .-+.+||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeE
Confidence 346899999999999999977643 6777775 3555554332 21111 112211 11 2358999
Q ss_pred hhhcc-cccccccc---CCCChhhhhhhhcccccCCcEEEEec
Q 013393 353 LLHAW-KVFSEIEE---RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 353 l~h~~-~~~~~~~~---~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+|++. .+|.++.. ..-....+|-++-|+|+|||++++..
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99998 67764322 12337889999999999999999864
No 347
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.20 E-value=0.0065 Score=54.80 Aligned_cols=144 Identities=12% Similarity=0.037 Sum_probs=90.2
Q ss_pred CCChhHHHhhHhhHHHHHHHH-HHHhhhhccCCceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh--
Q 013393 256 GVTTEEFHEDIGIWQVRVVDY-WKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD-- 330 (444)
Q Consensus 256 g~~~~~f~~~~~~w~~~v~~y-~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~-- 330 (444)
|+..+.|.++....++++... +..+. +. .-..|+|+.++-|.++..|... |. -+|+-++. +..+...-+
T Consensus 11 g~~d~~f~~~g~~~~~~i~~~~l~~l~--~~--~~~~vLDiG~G~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~ 84 (204)
T 3e05_A 11 IDDDEFATAKKLITKQEVRAVTLSKLR--LQ--DDLVMWDIGAGSASVSIEASNLMPN--GRIFALERNPQYLGFIRDNL 84 (204)
T ss_dssp CCGGGSCCCTTTSCCHHHHHHHHHHTT--CC--TTCEEEEETCTTCHHHHHHHHHCTT--SEEEEEECCHHHHHHHHHHH
T ss_pred CCCcHHhccCCcCChHHHHHHHHHHcC--CC--CCCEEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHH
Confidence 444455555545556666433 33332 33 3358999999999999888643 21 13444443 344443332
Q ss_pred --ccc--ccc-ccccccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHh
Q 013393 331 --RGL--IGT-VHDWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFIT 404 (444)
Q Consensus 331 --rg~--~~~-~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~ 404 (444)
.|+ +-+ ..|..+.++.. .+||++-++..+. ....++-++-|+|+|||.+++-+ ..+..+++.++++
T Consensus 85 ~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 156 (204)
T 3e05_A 85 KKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLE 156 (204)
T ss_dssp HHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHH
T ss_pred HHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHH
Confidence 243 212 22333444332 5799988776553 57889999999999999999974 4577888888888
Q ss_pred hccceeEEe
Q 013393 405 ALKWDGWLS 413 (444)
Q Consensus 405 ~~~w~~~~~ 413 (444)
...|++...
T Consensus 157 ~~g~~~~~~ 165 (204)
T 3e05_A 157 DHGYMVEVA 165 (204)
T ss_dssp HTTCEEEEE
T ss_pred HCCCceeEE
Confidence 888865443
No 348
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.15 E-value=0.0034 Score=56.78 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=66.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcccccc---ccccccCCCCCCcccchhhcccccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGT---VHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~~~---~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
..|+|+.++.|.++..|.... .+|+-++- +..+...-++|+-.+ -.|..+. .-+.+||+|.+.+++..+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEechhhcCCH
Confidence 489999999999999887652 25555553 355555555553221 1232222 33689999999998885432
Q ss_pred CCCChhhhhhhhcccccCCcEEEEecc
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
-.+..+|-++-|+|+|||.+++.+.
T Consensus 123 --~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 --DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp --HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2358899999999999999998753
No 349
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.14 E-value=0.0044 Score=62.19 Aligned_cols=103 Identities=10% Similarity=-0.022 Sum_probs=64.5
Q ss_pred CCeEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcC-------------CCcEEEEecCccC----CCCCC
Q 013393 45 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-------------IPSTLGVLGTKRL----PYPSR 107 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~-------------~~~~~~~~d~~~l----p~~~~ 107 (444)
+++||=||-|.|..++.+++.... .+.-.++.++.++.+++.- .++.+...|.... +-..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~--~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPK--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCS--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCCc--eeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 468999999999999999985332 2222344556666666531 1245666664332 11246
Q ss_pred CccEEEecccc-----ccccc----cHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 108 SFELAHCSRCR-----IDWLQ----RDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 108 sFDlI~~~~~~-----l~~~~----d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
+||+|+.-..- ..... -...+++.+.+.|+|||.++.+...+
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~ 334 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 334 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 79999964210 00000 11468899999999999999865444
No 350
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.12 E-value=0.0057 Score=58.25 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=67.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc---cccccccccCCC-CCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL---IGTVHDWCESFS-TYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~---~~~~~~~~~~~~-~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|.++..|..... +|+-++- +..+...-++ |+ +-+.+.=.+.++ ..+.+||+|.+.+++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 5799999999999999976632 5555554 3445443333 43 223333233344 446899999999999
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
..+. +...+|-|+-|+|+|||.+++.+
T Consensus 147 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVA----DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCS----CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccc----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8442 46889999999999999999965
No 351
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.12 E-value=0.008 Score=56.49 Aligned_cols=98 Identities=18% Similarity=0.291 Sum_probs=65.9
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccccccccccccCCCCCCcccchhhccccccccccC
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER 366 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~ 366 (444)
.-..|+|+.++.|.++..|..... +|+=++- +..+...-++..--....=.+.++.-+.+||+|-+.+.+-....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~- 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVE- 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCS-
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccc-
Confidence 345899999999999999987642 5555554 34555555553311222222334433579999998775442322
Q ss_pred CCChhhhhhhhcccccCCcEEEEec
Q 013393 367 GCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 367 ~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+...+|-|+-|+|+|||.+++..
T Consensus 130 --~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 130 --NKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --cHHHHHHHHHHHcCCCeEEEEEe
Confidence 28899999999999999999864
No 352
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.08 E-value=0.013 Score=53.63 Aligned_cols=138 Identities=14% Similarity=0.079 Sum_probs=84.0
Q ss_pred eEEEecccc-cchhhhhccCCCceEEEeccccC-CCchhHH----hhccc-cccccccccCCCCCC-cccchhhcccccc
Q 013393 290 RNVMDMNSN-LGGFAAALKDKDVWVMNVAPVRM-SARLKII----YDRGL-IGTVHDWCESFSTYP-RTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~-~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~----~~rg~-~~~~~~~~~~~~~y~-~~~dl~h~~~~~~ 361 (444)
..|+|+.+| -|.++..|.... --+|+-++- +..+... -..|+ +-+++.=.+.+..+| .+||+|-++--|.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 579999999 999988876542 234555554 2334332 22343 223322212233333 8999999886554
Q ss_pred cccc---------------CCCChhhhhhhhcccccCCcEEEE--eccHHHHHHHHHHHhhccceeEEeccccccCCCCC
Q 013393 362 EIEE---------------RGCSFEDLLIEMDRMLRPEGFVII--RDKSSIINYIRKFITALKWDGWLSEVEPRIDALSS 424 (444)
Q Consensus 362 ~~~~---------------~~c~~~~~~~e~drilrp~g~~~~--rd~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 424 (444)
.... ....+..++-++-|+|+|||.+++ -...+..+++.+.++...|++..... ..+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~g~--- 209 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKF--KVGT--- 209 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE--CCCC---
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEe--cCCC---
Confidence 2110 011137789999999999999987 44557788999999999998865433 2221
Q ss_pred CCceEEEEEe
Q 013393 425 SEERVLIAKK 434 (444)
Q Consensus 425 ~~~~~l~~~k 434 (444)
.--.+|+.+|
T Consensus 210 ~~~~~l~f~~ 219 (230)
T 3evz_A 210 RWRHSLIFFK 219 (230)
T ss_dssp -CEEEEEEEC
T ss_pred eEEEEEEEec
Confidence 1345666655
No 353
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.03 E-value=0.0055 Score=56.46 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=66.6
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhccc---cccccccccCCCCCCcccchhhccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGL---IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
..-..|+|+.++.|.++..|.....- +|+-++- +..+...-++.- +-+.+.-.+.++.-+.+||+|.+..++..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 34468999999999999998765321 4444443 244444433321 22222223334544689999999998874
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.. +...+|-++-|+|+|||.+++.+
T Consensus 120 ~~----~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE----DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc----hHHHHHHHHHHhcCcCcEEEEEe
Confidence 42 47899999999999999999965
No 354
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.03 E-value=0.011 Score=56.36 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=46.4
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc----------------HHHHHHHHHHHhhccceeE
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK----------------SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~----------------~~~~~~~~~~~~~~~w~~~ 411 (444)
+.+||+|-+..+|..+...--+...+|-|+-|+|||||.+++.+. .-..+++++++..-.++..
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEE
Confidence 467999999998874322112478899999999999999998531 1135778888877767653
No 355
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.02 E-value=0.0076 Score=55.89 Aligned_cols=92 Identities=13% Similarity=0.273 Sum_probs=61.0
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHH----hhccc---cccc-cccccCCC-CCCcccchhhcc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKII----YDRGL---IGTV-HDWCESFS-TYPRTYDLLHAW 357 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~----~~rg~---~~~~-~~~~~~~~-~y~~~~dl~h~~ 357 (444)
-..|+|+.++.|.++.+|... | .-.|+-++- +..+... -..|+ |-+. .|..+.++ ..+.+||+|.++
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 458999999999999998762 2 235666654 3334332 22343 2222 34444444 446899999866
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
.-. -....++-++-|.|||||.+++
T Consensus 150 ~~~-------~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 150 AAK-------AQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TTS-------SSHHHHHHHHGGGEEEEEEEEE
T ss_pred CcH-------HHHHHHHHHHHHhcCCCeEEEE
Confidence 422 2367788899999999999999
No 356
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.01 E-value=0.0046 Score=56.48 Aligned_cols=98 Identities=15% Similarity=0.282 Sum_probs=65.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc-------cccccccccCCCCCCcccchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL-------IGTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~-------~~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
..|+|+.++.|.++.+|..... +|+-++- +..+...-+ .|+ +-....=.+.++.-+.+||++-+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4799999999999999976632 5666654 344444333 333 222332233445446899999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+++..+. +.-....+|-++-|+|||||.+++.+
T Consensus 109 ~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 109 AFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp SCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9887442 21123379999999999999999964
No 357
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.00 E-value=0.0077 Score=53.82 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=82.6
Q ss_pred EEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhh----ccc---cccccccccCCC-CCCcccchhhcccc
Q 013393 291 NVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYD----RGL---IGTVHDWCESFS-TYPRTYDLLHAWKV 359 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~----rg~---~~~~~~~~~~~~-~y~~~~dl~h~~~~ 359 (444)
.|+|+.+|-|.++..|... |-- +|+-++. +..+...-+ .|+ +-+.+.=.+.++ ..+.+||+|-++..
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 7999999999999888653 221 5555664 344444322 243 323332223343 45689999988765
Q ss_pred ccccc-----cCCCChhhhhhhhcccccCCcEEEEec------cHHHHHHHHHHHhhcc---ceeEEeccccccCCCCCC
Q 013393 360 FSEIE-----ERGCSFEDLLIEMDRMLRPEGFVIIRD------KSSIINYIRKFITALK---WDGWLSEVEPRIDALSSS 425 (444)
Q Consensus 360 ~~~~~-----~~~c~~~~~~~e~drilrp~g~~~~rd------~~~~~~~~~~~~~~~~---w~~~~~~~~~~~~~~~~~ 425 (444)
+-... ...-....++-++-|+|+|||.+++-+ ..+..+.+.+.+..+. |++.....-+.. +.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~----~~ 178 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQA----NC 178 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCC----SC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCc----cC
Confidence 41000 000123468999999999999999864 2224555666666554 877544332221 12
Q ss_pred CceEEEEEecc
Q 013393 426 EERVLIAKKKL 436 (444)
Q Consensus 426 ~~~~l~~~k~~ 436 (444)
+..++|.+|..
T Consensus 179 pp~~~~~~~~~ 189 (197)
T 3eey_A 179 PPILVCIEKIS 189 (197)
T ss_dssp CCEEEEEEECC
T ss_pred CCeEEEEEEcc
Confidence 46778877753
No 358
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.99 E-value=0.004 Score=54.80 Aligned_cols=92 Identities=15% Similarity=0.199 Sum_probs=59.1
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccHH----------HHHHHHHHHhhccceeEEecccc
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS----------IINYIRKFITALKWDGWLSEVEP 417 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~----------~~~~~~~~~~~~~w~~~~~~~~~ 417 (444)
+.+||+|.+..++.... .+...+|-|+-|+|||||.+++.+... ..+++.+.++.-.+ +.+.....
T Consensus 61 ~~~fD~V~~~~~l~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~ 136 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT---LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQR 136 (176)
T ss_dssp SSCEEEEEECCSTTCCC---CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEE
T ss_pred CCCEeEEEECChhhhcc---cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcc
Confidence 58999999988777431 246899999999999999999964321 14667777775555 43333211
Q ss_pred cc-CC---------CCCC----CceEEEEEeccccccccc
Q 013393 418 RI-DA---------LSSS----EERVLIAKKKLWDEEVAA 443 (444)
Q Consensus 418 ~~-~~---------~~~~----~~~~l~~~k~~w~~~~~~ 443 (444)
.. .+ .... .--+++++|+-|...+|+
T Consensus 137 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~gs~~ 176 (176)
T 2ld4_A 137 EPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSR 176 (176)
T ss_dssp ECCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSCCSCC
T ss_pred cCCCHHHHHHHHHHhcccCCceEEEEEeccCCcccccCCC
Confidence 00 00 0000 134789999988776653
No 359
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.97 E-value=0.0046 Score=54.05 Aligned_cols=109 Identities=7% Similarity=0.053 Sum_probs=76.6
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc--cc-cccccccCCCCCCcccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL--IG-TVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~--~~-~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
..++|+.++.|.++..|.. +. .+|+-++- +.-+...-+ .|+ +- +-.|+.++++. .+||++.+++.
T Consensus 37 ~~vLdiG~G~G~~~~~l~~-~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~-- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK-RC--KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT-- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT-TS--SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC--
T ss_pred CEEEEeCCCCCHHHHHHHh-cC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc--
Confidence 4899999999999999987 32 24554543 233333222 233 11 22344454432 58999998886
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhccceeEEe
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGWLS 413 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~w~~~~~ 413 (444)
.....++-++-|+ |||.+++-+ ..+-+.++.+.++...|++...
T Consensus 110 ------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 3578899999998 999999976 7788888999999888888654
No 360
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.97 E-value=0.0056 Score=53.82 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=76.5
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc---cc-cccccccCCCCCCcccchhhcccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL---IG-TVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~---~~-~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
-..|+|+.++.|.++..+...- -+|+-++. +..+...-+ .|+ +- .-.|..+.++.. .+||++-+++.
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCc
Confidence 3589999999999998887654 35555554 233333222 232 11 123444433322 48999988876
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhccceeEEe
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGWLS 413 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~w~~~~~ 413 (444)
+. .+..++-++-|+|+|||.+++-+ ..+...++.++++...|++...
T Consensus 110 ~~-------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 110 GG-------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp TT-------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred hH-------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 54 26889999999999999998865 4667788888888877765543
No 361
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=95.97 E-value=0.03 Score=51.91 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=84.6
Q ss_pred eeEEEecccccchhhhhccC-CCceEEEeccccCC-CchhHH----hhccc--cccccccccCCCC---CCcccchhhcc
Q 013393 289 FRNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMS-ARLKII----YDRGL--IGTVHDWCESFST---YPRTYDLLHAW 357 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~~-~~l~~~----~~rg~--~~~~~~~~~~~~~---y~~~~dl~h~~ 357 (444)
-..|+|+.+|-|.++..|.. .|.. .|+=++.. .-+.+. -..|+ |-+++.-.+.++. .+.+||+|.+.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL--HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 45899999999988877762 2322 35555532 333332 22354 4444433333432 35789999987
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEecc---HHHHHHHHHHHhhccceeEEe-ccccccCCCCCCCceEEEEE
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK---SSIINYIRKFITALKWDGWLS-EVEPRIDALSSSEERVLIAK 433 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~---~~~~~~~~~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~l~~~ 433 (444)
.+ .++..++-++-|+|+|||.+++-+. .+-+.++.+.++...++.... .+. -+...+...+++.+
T Consensus 149 ~~--------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 149 AV--------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFK---LPIEESDRNIMVIR 217 (240)
T ss_dssp CC--------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEE---CTTTCCEEEEEEEE
T ss_pred cc--------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEe---cCCCCCceEEEEEE
Confidence 63 3478999999999999999998653 344566777777777776321 111 12222345677777
Q ss_pred eccccc
Q 013393 434 KKLWDE 439 (444)
Q Consensus 434 k~~w~~ 439 (444)
|.=.++
T Consensus 218 k~~~~~ 223 (240)
T 1xdz_A 218 KIKNTP 223 (240)
T ss_dssp ECSCCC
T ss_pred ecCCCC
Confidence 764443
No 362
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.93 E-value=0.0063 Score=54.82 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=79.3
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHh----hccc--ccccc-ccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIY----DRGL--IGTVH-DWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~----~rg~--~~~~~-~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.+|.|.++.+|... |-. +|+-++. +..+...- ..|+ +-+++ |+.+ ++ -+.+||+|.+.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 37999999999998888642 321 4555553 23333322 2344 22332 3332 22 1378999987553
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhccceeEE-eccccccCCCCCCCceEEEEEec
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGWL-SEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
.+...++-++-|+|+|||.+++-.....-++++.+.+ .|+... ..... +...+...+++++|+
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~---~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQV---PALDGERHLVVIKAN 205 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEEC---C--CCEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeecc---CCCCCceEEEEEEec
Confidence 2477899999999999999999876666677777777 666532 10111 122245778887774
No 363
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.91 E-value=0.01 Score=52.48 Aligned_cols=138 Identities=14% Similarity=0.105 Sum_probs=78.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHH----hhccc--cccccccccCCCCC-Ccccchhhcc-ccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKII----YDRGL--IGTVHDWCESFSTY-PRTYDLLHAW-KVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~----~~rg~--~~~~~~~~~~~~~y-~~~~dl~h~~-~~~ 360 (444)
..|+|+.+|.|.++..|.+. .-+|+=++- +.-+... -+.|+ +-+.++-.+.++.+ +.+||++.++ +.+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 37999999999999999876 235665663 3444432 23354 44455555554322 6789999665 333
Q ss_pred cccc----cCCCChhhhhhhhcccccCCcEEEEecc------HHHHHHHHHHHhhcc---ceeEEeccccccCCCCCCCc
Q 013393 361 SEIE----ERGCSFEDLLIEMDRMLRPEGFVIIRDK------SSIINYIRKFITALK---WDGWLSEVEPRIDALSSSEE 427 (444)
Q Consensus 361 ~~~~----~~~c~~~~~~~e~drilrp~g~~~~rd~------~~~~~~~~~~~~~~~---w~~~~~~~~~~~~~~~~~~~ 427 (444)
.... ...-.....+-|+-|+|+|||.+++-.- .+..+.+.+.+..+. |.+.....-+.. +...
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~ 176 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQI----NTPP 176 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCS----SCCC
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccC----CCCC
Confidence 2100 0111234667899999999999988432 233455666666554 776544332211 1234
Q ss_pred eEEEEEe
Q 013393 428 RVLIAKK 434 (444)
Q Consensus 428 ~~l~~~k 434 (444)
.+++..|
T Consensus 177 ~~~~i~~ 183 (185)
T 3mti_A 177 FLVMLEK 183 (185)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 5666655
No 364
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=95.91 E-value=0.0072 Score=54.24 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=78.3
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHh----hccc--cccccccccCCCC---CCcccchhhc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIY----DRGL--IGTVHDWCESFST---YPRTYDLLHA 356 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~----~rg~--~~~~~~~~~~~~~---y~~~~dl~h~ 356 (444)
.-..|+|+.+|-|.++.++... |- .+|+-++- +..+...- ..|+ -=+-.|..+.++. .+.+||+|-+
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPG--VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTT--EEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 3468999999999998888653 21 24444443 23332221 1122 1223455554432 2378999998
Q ss_pred cccccccc------c------CCCC----------hhhhhhhhcccccCCcE-EEEeccHHHHHHHHHHHh--hccceeE
Q 013393 357 WKVFSEIE------E------RGCS----------FEDLLIEMDRMLRPEGF-VIIRDKSSIINYIRKFIT--ALKWDGW 411 (444)
Q Consensus 357 ~~~~~~~~------~------~~c~----------~~~~~~e~drilrp~g~-~~~rd~~~~~~~~~~~~~--~~~w~~~ 411 (444)
+--|.... . .... +..++-++-|+|+|||. +++--.....+++.+++. .-.|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 65443100 0 0111 17888999999999999 777555555667777777 6666542
Q ss_pred EeccccccCCCCCCCceEEEEEec
Q 013393 412 LSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
.... ...+.+++++++|.
T Consensus 188 -~~~~-----~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 -RKVK-----DLRGIDRVIAVTRE 205 (215)
T ss_dssp -CEEE-----CTTSCEEEEEEEEC
T ss_pred -EEEE-----ecCCCEEEEEEEEc
Confidence 1111 12235899999875
No 365
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.91 E-value=0.013 Score=54.69 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=77.0
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhc----c-----------------------------
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----G----------------------------- 332 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~r----g----------------------------- 332 (444)
..-..|+|+.++.|.++..|..... -+|+-++-. ..+...-++ +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3446899999999999888875433 356666543 334333221 1
Q ss_pred --cc-cc-ccccccCCCCCC---cccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------
Q 013393 333 --LI-GT-VHDWCESFSTYP---RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------ 393 (444)
Q Consensus 333 --~~-~~-~~~~~~~~~~y~---~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------ 393 (444)
-| -+ -.|..+.-+.-+ .+||+|.+..++..+..+.-+...+|-++-|+|+|||.+++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 02 11 123333222123 799999999888732221124678999999999999999997621
Q ss_pred ----HHHHHHHHHHhhccceeE
Q 013393 394 ----SIINYIRKFITALKWDGW 411 (444)
Q Consensus 394 ----~~~~~~~~~~~~~~w~~~ 411 (444)
-..+++.+++..-.+++.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEE
T ss_pred cccccCHHHHHHHHHHCCCEEE
Confidence 124477788877777664
No 366
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.88 E-value=0.0091 Score=54.31 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=69.2
Q ss_pred HHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----c-ccc-cccccccCCC
Q 013393 273 VVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----G-LIG-TVHDWCESFS 345 (444)
Q Consensus 273 v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g-~~~-~~~~~~~~~~ 345 (444)
.+.+...+.+.+.. -..|+|+.++.|.++..|..... +|+-++- +..+...-++ | -+- +..|..+ ++
T Consensus 25 ~~~~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~ 98 (227)
T 1ve3_A 25 IETLEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LS 98 (227)
T ss_dssp HHHHHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CC
T ss_pred HHHHHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CC
Confidence 33333444333433 45899999999999988875532 5665554 3344433322 1 111 2223332 33
Q ss_pred CCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH
Q 013393 346 TYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 393 (444)
Q Consensus 346 ~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~ 393 (444)
.-+.+||+|.+..++.... .-+...++-++-|+|+|||.+++-+..
T Consensus 99 ~~~~~~D~v~~~~~~~~~~--~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFE--PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCTTCEEEEEEESCGGGCC--HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCcEEEEEEcCchHhCC--HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 3347999999998844111 123678999999999999999997653
No 367
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=95.86 E-value=0.016 Score=49.97 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=72.0
Q ss_pred eEEEecccccchhhhhccCC--C---ceEEEeccccCCCchhHHhhccccccccccccCCC--------CCCcccchhhc
Q 013393 290 RNVMDMNSNLGGFAAALKDK--D---VWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFS--------TYPRTYDLLHA 356 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~---~wv~~~~~~~~~~~l~~~~~rg~~~~~~~~~~~~~--------~y~~~~dl~h~ 356 (444)
.+|+|+.++.|+++.++... | +...-+-| -+.+ . .+--+..|..+ ++ .-+.+||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-----~~~~--~-~~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-----MDPI--V-GVDFLQGDFRD-ELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-----CCCC--T-TEEEEESCTTS-HHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-----cccc--C-cEEEEEccccc-chhhhhhhccCCCCceeEEEE
Confidence 48999999999999888643 2 22222222 1111 1 11111123222 11 12478999999
Q ss_pred cccccccccCC-CC------hhhhhhhhcccccCCcEEEEecc-HHHHHHHHHHHhhccceeEEeccccccCCCCCCCce
Q 013393 357 WKVFSEIEERG-CS------FEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 428 (444)
Q Consensus 357 ~~~~~~~~~~~-c~------~~~~~~e~drilrp~g~~~~rd~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 428 (444)
+..+....... -. ...++-++-|+|+|||.+++... ..-..++.+.+.. .|+... ...+.. ......|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~ 171 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVK-VRKPDS-SRARSREV 171 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEE-EECCTT-SCTTCCEE
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEE-eecCCc-ccccCceE
Confidence 88775211000 00 16789999999999999999532 1223344444444 365422 222221 12234688
Q ss_pred EEEEEec
Q 013393 429 VLIAKKK 435 (444)
Q Consensus 429 ~l~~~k~ 435 (444)
.++|++.
T Consensus 172 ~~~~~~~ 178 (180)
T 1ej0_A 172 YIVATGR 178 (180)
T ss_dssp EEEEEEE
T ss_pred EEEEccC
Confidence 8888763
No 368
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=95.84 E-value=0.012 Score=55.51 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=80.6
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHH----hhccc---ccccc-ccccCCCCC-Ccccchhhccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKII----YDRGL---IGTVH-DWCESFSTY-PRTYDLLHAWK 358 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~----~~rg~---~~~~~-~~~~~~~~y-~~~~dl~h~~~ 358 (444)
-..|+|+.++-|+++..|....-. +|+-++-. ..+... -..|+ +-+++ |..+....+ +.+||+|-++-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 357999999999999988776433 56666643 333322 22244 22333 333322223 58999999975
Q ss_pred ccccc----------------ccCCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhccceeEE
Q 013393 359 VFSEI----------------EERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGWL 412 (444)
Q Consensus 359 ~~~~~----------------~~~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~~~ 412 (444)
-|... ....+.+..++-++-|+|+|||.+++--..+.+.++...+....|+...
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 54311 0112567889999999999999999976677788888888888888753
No 369
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.83 E-value=0.0055 Score=55.11 Aligned_cols=121 Identities=13% Similarity=0.135 Sum_probs=71.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc----cccc-ccccccCCCCCCcccchhhcccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG----LIGT-VHDWCESFSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg----~~~~-~~~~~~~~~~y~~~~dl~h~~~~~~~~ 363 (444)
..|+|+.++-|.++..|.....- +|+-++- +..+...-++. -+-+ ..|.. .++.-+.+||+|-+.++|..+
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~-~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVR-KLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTT-SCCSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchh-cCCCCCCcccEEEECcchhhh
Confidence 47999999999999888754210 4444443 23333322221 1112 22332 233334799999998888633
Q ss_pred c-----------cCCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHH--hhccceeEEec
Q 013393 364 E-----------ERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFI--TALKWDGWLSE 414 (444)
Q Consensus 364 ~-----------~~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~--~~~~w~~~~~~ 414 (444)
. .+.-....++-|+-|+|+|||.+++.+-..- ...+.++ ....|+.....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 183 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHAT 183 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEEE
Confidence 2 0112468899999999999999999875431 1122333 34468775443
No 370
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=95.79 E-value=0.034 Score=51.83 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=82.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc-ccc-----cccccc-cCCCCCCcccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG-LIG-----TVHDWC-ESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg-~~~-----~~~~~~-~~~~~y~~~~dl~h~~~~~~ 361 (444)
..|+|+.++-|+|+..|.....- .|+=+|- ++.|.....+. -++ -....+ +.++. .-+|..-.+-+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 47999999999999888765421 4555663 45555433221 011 111112 33332 0135555555665
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEe-------------------cc---HHHHHHHHHHHhhccceeEEecccccc
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIR-------------------DK---SSIINYIRKFITALKWDGWLSEVEPRI 419 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~r-------------------d~---~~~~~~~~~~~~~~~w~~~~~~~~~~~ 419 (444)
. +..+|-|+-|+|+|||.+++- |. ...++++.+++....|++......+-.
T Consensus 115 ~-------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~ 187 (232)
T 3opn_A 115 S-------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIK 187 (232)
T ss_dssp C-------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSC
T ss_pred h-------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCC
Confidence 2 478999999999999999873 11 135678888999989988654443333
Q ss_pred CCCCCCCceEEEEEec
Q 013393 420 DALSSSEERVLIAKKK 435 (444)
Q Consensus 420 ~~~~~~~~~~l~~~k~ 435 (444)
++. .+.|-++.++|+
T Consensus 188 g~~-gn~e~l~~~~~~ 202 (232)
T 3opn_A 188 GGA-GNVEFLVHLLKD 202 (232)
T ss_dssp BTT-TBCCEEEEEEES
T ss_pred CCC-CCHHHHHHHhhc
Confidence 332 245778888774
No 371
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.79 E-value=0.0089 Score=54.36 Aligned_cols=120 Identities=14% Similarity=0.172 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHHhhhhccCCceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc----cc-------
Q 013393 267 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR----GL------- 333 (444)
Q Consensus 267 ~~w~~~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r----g~------- 333 (444)
...+++.+.....+. ...-..|+|+.++.|.++.+|... +. .+|+-++- +..+...-++ |+
T Consensus 12 ~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 85 (217)
T 3jwh_A 12 SLNQQRMNGVVAALK----QSNARRVIDLGCGQGNLLKILLKDSFF--EQITGVDVSYRSLEIAQERLDRLRLPRNQWER 85 (217)
T ss_dssp CHHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHHCTTC--SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTT
T ss_pred CHHHHHHHHHHHHHH----hcCCCEEEEeCCCCCHHHHHHHhhCCC--CEEEEEECCHHHHHHHHHHHHHhcCCcccCcc
Confidence 344455544444443 223358999999999999999753 32 14555553 3444443333 21
Q ss_pred cccccccccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccHH
Q 013393 334 IGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS 394 (444)
Q Consensus 334 ~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~ 394 (444)
+-+++.-.+..+.-+.+||+|-+..+|..+.. -.+..+|-++-|+|+|||.+++-+..+
T Consensus 86 v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 86 LQLIQGALTYQDKRFHGYDAATVIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EEEEECCTTSCCGGGCSCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred eEEEeCCcccccccCCCcCEEeeHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 11222111223333479999999999885532 245788999999999999998876653
No 372
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.79 E-value=0.0028 Score=77.95 Aligned_cols=96 Identities=17% Similarity=0.259 Sum_probs=40.8
Q ss_pred eEEEECCCcchHHHHHhhC---------CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccC-CCCCCCccEEEecc
Q 013393 47 NVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSR 116 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~---------~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~l-p~~~~sFDlI~~~~ 116 (444)
+||+||.|+|..+..+.+. .++..|+++.-...++.++.. .++.....|.... ++...+||+|+++.
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEEEcc
Confidence 7999999999765544321 234456665433333322321 1222222233221 34456799999988
Q ss_pred ccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 117 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 117 ~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
++|-.++....+.++.++|||||++++..
T Consensus 1320 -vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1320 -ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -C--------------------CCEEEEEE
T ss_pred -cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 57777888899999999999999998864
No 373
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.0068 Score=58.26 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=63.8
Q ss_pred ceeEEEecccccchhhhhccC--CCceEEEeccccC-CCchhHHhhc-----cc---cccccccccCCCCCC------cc
Q 013393 288 TFRNVMDMNSNLGGFAAALKD--KDVWVMNVAPVRM-SARLKIIYDR-----GL---IGTVHDWCESFSTYP------RT 350 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~--~~~wv~~~~~~~~-~~~l~~~~~r-----g~---~~~~~~~~~~~~~y~------~~ 350 (444)
.-..|+|+.+|.|.++..|.. .+. -+|+-++- +..+...-++ |. +-..+.=.+.++.-+ .+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPF--EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCC--SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 456899999999999999983 222 24555553 3444444333 22 222222223333222 69
Q ss_pred cchhhccccccccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 351 YDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 351 ~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
||+|++..++... +...++-++-|+|||||.+++
T Consensus 114 fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 9999999988743 689999999999999999998
No 374
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.60 E-value=0.013 Score=53.25 Aligned_cols=139 Identities=11% Similarity=0.011 Sum_probs=83.3
Q ss_pred CCChhHHHhhHhhHHHHHHHH-HHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh---
Q 013393 256 GVTTEEFHEDIGIWQVRVVDY-WKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD--- 330 (444)
Q Consensus 256 g~~~~~f~~~~~~w~~~v~~y-~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~--- 330 (444)
|+..+.|..+....++.+... ...+. +. .-..|+|+.++.|.++..|... ...|+-++- +..+...-+
T Consensus 26 g~~d~~f~~~~~~~~~~~~~~~l~~l~--~~--~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~ 98 (204)
T 3njr_A 26 GRPESAFAHDGQITKSPMRALTLAALA--PR--RGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNID 98 (204)
T ss_dssp CCCGGGSCCSSCCCCHHHHHHHHHHHC--CC--TTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCHHHhhcCCCCCcHHHHHHHHHhcC--CC--CCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHH
Confidence 334444544444445555432 22232 33 3357999999999999887655 234555553 344443322
Q ss_pred -cccc---cccc-ccccCCCCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHh
Q 013393 331 -RGLI---GTVH-DWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFIT 404 (444)
Q Consensus 331 -rg~~---~~~~-~~~~~~~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~ 404 (444)
.|+- -+.+ |..+.++.. .+||++-+++.+ +.. ++-++-|.|||||.+++.. ..+.+.++.+.++
T Consensus 99 ~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 168 (204)
T 3njr_A 99 TYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHA 168 (204)
T ss_dssp HTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHH
T ss_pred HcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHH
Confidence 2432 2222 223323333 358887655522 456 8999999999999999965 4677888888888
Q ss_pred hccceeE
Q 013393 405 ALKWDGW 411 (444)
Q Consensus 405 ~~~w~~~ 411 (444)
...+++.
T Consensus 169 ~~g~~i~ 175 (204)
T 3njr_A 169 RHGGQLL 175 (204)
T ss_dssp HHCSEEE
T ss_pred hCCCcEE
Confidence 7777764
No 375
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.55 E-value=0.014 Score=58.52 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=71.6
Q ss_pred HHHHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccCCCchhH----Hhhccc---cccccccccCC
Q 013393 272 RVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESF 344 (444)
Q Consensus 272 ~v~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~----~~~rg~---~~~~~~~~~~~ 344 (444)
+.+.|...+...+....=..|+|+.+|.|.++..+.+... -.|+-++..+-+.. +-..|+ |-+.+.-.+.+
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhc
Confidence 3344555553333333446899999999999887765432 14555554433332 334454 44455444554
Q ss_pred CCCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 345 STYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 345 ~~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+ +|.+||+|.+..+...+. +.-.+..++-+++|+|+|||.+++.
T Consensus 125 ~-~~~~~D~Iv~~~~~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 125 S-LPEKVDVIISEWMGYFLL-RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp C-CSSCEEEEEECCCBTTBT-TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred C-cCCcceEEEEcChhhccc-chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 4 569999999966443221 2234777999999999999999873
No 376
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=95.54 E-value=0.012 Score=52.76 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=73.0
Q ss_pred EEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhc----cc-cccccccccCCCCCCcccchhhccccccccc
Q 013393 291 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~r----g~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
.|+|+.++.|.++..|..... +|+-++.. ..+...-++ |+ +-+.+.=.+.++.-+.+||+|.+. |...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHL- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCC-
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcC-
Confidence 899999999999999987643 66666643 444443333 33 222222233334334799999874 3322
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEecc-----------------HHHHHHHHHHHhhccceeE
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRDK-----------------SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd~-----------------~~~~~~~~~~~~~~~w~~~ 411 (444)
..-+...++-++-|+|+|||.+++.+. .-..+++++++. .|++.
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 122477899999999999999999631 123567777777 66664
No 377
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.50 E-value=0.0081 Score=57.09 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=65.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhc----cc---cccccccccCCCC-CCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL---IGTVHDWCESFST-YPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~r----g~---~~~~~~~~~~~~~-y~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|+++..|...+. -+|+-++-. ..+...-++ |+ +-+.+.=++.++. -+.+||+|.+.+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 4899999999999988875442 145555542 344433332 33 2333322333333 36799999999887
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEecc
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
.....+.-+...+|-|+-|+|+|||.+++...
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 53212223467899999999999999998653
No 378
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.50 E-value=0.0062 Score=61.10 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=75.8
Q ss_pred eEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc---------c-c----cccccccccCC------CC
Q 013393 290 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR---------G-L----IGTVHDWCESF------ST 346 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r---------g-~----~~~~~~~~~~~------~~ 346 (444)
..|+|+.++.|.++..|... |-. .|+=++- +..+...-++ | + +-..+.-.+.+ +.
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG--KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC--EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 47999999999998887643 322 4555554 3455554444 4 1 22222222222 33
Q ss_pred CCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH-----------------------HHHHHHHHHH
Q 013393 347 YPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-----------------------SIINYIRKFI 403 (444)
Q Consensus 347 y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-----------------------~~~~~~~~~~ 403 (444)
-+.+||+|+++.++... . +...+|-|+-|+|||||++++.|-. -..+++.+++
T Consensus 163 ~~~~fD~V~~~~~l~~~-~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLS-T---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CTTCEEEEEEESCGGGC-S---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCEEEEEEccchhcC-C---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHH
Confidence 35799999999999843 2 3789999999999999999996421 1126777788
Q ss_pred hhcccee
Q 013393 404 TALKWDG 410 (444)
Q Consensus 404 ~~~~w~~ 410 (444)
..-.++.
T Consensus 239 ~~aGF~~ 245 (383)
T 4fsd_A 239 AEAGFRD 245 (383)
T ss_dssp HHTTCCC
T ss_pred HHCCCce
Confidence 7777753
No 379
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=95.49 E-value=0.011 Score=57.95 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=61.7
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCCCchhH----Hhhccc---cccccccccCCCCCC-cccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFSTYP-RTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~----~~~rg~---~~~~~~~~~~~~~y~-~~~dl~h~~~~~~ 361 (444)
..|+|+.+|-|.++..+...+. -.|+-++....+.. +-+.|+ |-+.+.-.+.++ .| .+||+|.+..+..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMGY 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCBT
T ss_pred CEEEEecCccHHHHHHHHHCCC--CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCchh
Confidence 4899999999999887765542 24444444323332 233455 334444444444 34 8999999886544
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEE
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVI 388 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~ 388 (444)
.+. +.-.+..++-+++|.|+|||.++
T Consensus 117 ~l~-~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLL-YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBS-TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcc-cHHHHHHHHHHHHhhcCCCeEEE
Confidence 221 22357789999999999999997
No 380
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.43 E-value=0.0096 Score=54.67 Aligned_cols=98 Identities=18% Similarity=0.274 Sum_probs=63.1
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc----cccccccccccCCCCCCcccchhhccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r----g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
=..|+|+.++.|.++..|... |- .+|+-++- +..+...-++ |-+-+.+.-.+.++ ++.+||+|.+..++..
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPE--ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD-FEEKYDMVVSALSIHH 121 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC-CCSCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC-CCCCceEEEEeCcccc
Confidence 368999999999999888653 21 24555553 3444443333 11222222223333 2389999999998874
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+.. -....+|-|+-|+|+|||.+++-|
T Consensus 122 ~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 122 LED--EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 421 123358999999999999999966
No 381
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.41 E-value=0.0092 Score=57.79 Aligned_cols=98 Identities=12% Similarity=0.039 Sum_probs=65.7
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHh----hccc---cccccccccCCCCCCcccchhhccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIY----DRGL---IGTVHDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~----~rg~---~~~~~~~~~~~~~y~~~~dl~h~~~ 358 (444)
..-..|+|+.++.|.++..|.+.. -..|+-++- +..+...- +.|+ +-..+.=.+.++.=+.+||+|.+..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 445689999999999999887541 124555553 34444332 2344 2222222334442248999999998
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++... +...+|-|+-|+|+|||.+++-+
T Consensus 194 ~l~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 194 STMYV-----DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp CGGGS-----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhC-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88743 38999999999999999999854
No 382
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.36 E-value=0.021 Score=52.98 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=65.2
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhcc-ccccccccccCCCCCCcccchhhcccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDRG-LIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~rg-~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~ 363 (444)
..-..|+|+.++.|.++..|.+. |. -+|+-++- +..+...-++. -+-..+.-.+.++ -+.+||+|++..++...
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGV--NVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCT--TSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC
Confidence 33458999999999999888653 11 13444443 24444444441 0222222234455 46899999999988743
Q ss_pred ccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 364 EERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 364 ~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
. +...+|-|+-|+|+|||.+++..
T Consensus 109 ~----~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 109 P----DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp T----THHHHHHHHGGGEEEEEEEEEEE
T ss_pred C----CHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 47889999999999999999964
No 383
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=95.32 E-value=0.021 Score=56.42 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=67.6
Q ss_pred HHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccCCCchhH----Hhhccc---cccccccccCCCCC
Q 013393 275 DYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFSTY 347 (444)
Q Consensus 275 ~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~----~~~rg~---~~~~~~~~~~~~~y 347 (444)
.|...+...+....=..|+|+.+|.|.++..+...+. -.|+-++....+.. +-+.|+ |-+.+.-.+.++ .
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 113 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-L 113 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-C
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-C
Confidence 3444443333333345899999999999887765542 13444443322322 222354 333333233332 4
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
|..||+|-+..++..+.. -.+...+.++-|+|+|||.+++.
T Consensus 114 ~~~~D~Ivs~~~~~~~~~--~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 PEQVDIIISEPMGYMLFN--ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SSCEEEEEECCCBTTBTT--TSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCceeEEEEeCchhcCCh--HHHHHHHHHHHhhcCCCeEEEEe
Confidence 678999999887764432 24677888999999999999853
No 384
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.31 E-value=0.033 Score=52.38 Aligned_cols=140 Identities=14% Similarity=0.038 Sum_probs=85.6
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccCC-CchhH----Hhhccc--cccccccccCCC---CCCcccchhhc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKI----IYDRGL--IGTVHDWCESFS---TYPRTYDLLHA 356 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~----~~~rg~--~~~~~~~~~~~~---~y~~~~dl~h~ 356 (444)
.-..|+|+.+|-|..+..|... |-+ .|+=++.. .-+.+ +-.-|+ |=++|.-.|.++ .++.+||+|-+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPEL--ELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3458999999999887776532 322 35555532 33332 233355 344444444444 35589999987
Q ss_pred cccccccccCCCChhhhhhhhcccccCCcEEEEec---cHHHHHHHHHHHhhccceeEEeccccccCCCCCCCceEEEEE
Q 013393 357 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD---KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAK 433 (444)
Q Consensus 357 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd---~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~ 433 (444)
..+ .++..++-++-|+|+|||.+++-. ..+-+.++++.++.+.++.... .+ -.-|...+...+++.+
T Consensus 158 ~a~--------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~-~~-~~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 158 RAV--------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEV-LA-LQLPLSGEARHLVVLE 227 (249)
T ss_dssp ESS--------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEE-EE-EECTTTCCEEEEEEEE
T ss_pred CCc--------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEE-EE-eeCCCCCCcEEEEEEE
Confidence 543 247788899999999999888743 3556677777778888876421 11 1122222345667777
Q ss_pred eccccc
Q 013393 434 KKLWDE 439 (444)
Q Consensus 434 k~~w~~ 439 (444)
|.=.++
T Consensus 228 k~~~t~ 233 (249)
T 3g89_A 228 KTAPTP 233 (249)
T ss_dssp ECSCCC
T ss_pred eCCCCC
Confidence 765543
No 385
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=95.31 E-value=0.014 Score=57.80 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=63.8
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCCCchh----HHhhccc---cccccccccCCCCCC-cccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLK----IIYDRGL---IGTVHDWCESFSTYP-RTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~----~~~~rg~---~~~~~~~~~~~~~y~-~~~dl~h~~~~~~ 361 (444)
..|+|+.+|-|.++..+.+.+. -.|+=++...-+. .+-..|+ |-+.+.-.+.++ +| .+||+|.+..+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccccc
Confidence 5799999999999988876643 1344444433333 2334555 344444445543 44 8999999876544
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
.+ ...-.+..++-+++|+|+|||.++.
T Consensus 145 ~l-~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CL-FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TB-TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cc-cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 22 1224578899999999999999864
No 386
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.29 E-value=0.024 Score=54.32 Aligned_cols=94 Identities=14% Similarity=0.259 Sum_probs=63.0
Q ss_pred EEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc-----cccccccccCCCCCCcccchhhcc-cc
Q 013393 291 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-----IGTVHDWCESFSTYPRTYDLLHAW-KV 359 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~-----~~~~~~~~~~~~~y~~~~dl~h~~-~~ 359 (444)
.|+|+.++.|.++..|.... .+|+-++- +..+...-++ |+ +-+.+.=.+.++. +.+||+|.+. .+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred cEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 79999999999999998763 25666664 3444443333 21 2233333344554 8999998854 44
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+.... .-....+|-++-|+|||||.+++.
T Consensus 161 ~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 161 INELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 44221 123688999999999999999994
No 387
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.29 E-value=0.036 Score=52.56 Aligned_cols=135 Identities=13% Similarity=0.225 Sum_probs=85.2
Q ss_pred eEEEecccccchhhhhccC-CCceEEEeccccC-CCchhHHhhc----cc--cc-cccccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRM-SARLKIIYDR----GL--IG-TVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~-~~~l~~~~~r----g~--~~-~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.+|-|.++.+|.. .|.+ +|+-++. +..+.+.-++ |+ +- +-.|+.+.++ +.+||+|-++--+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4799999999999988863 2332 4555554 3444443322 33 22 2335666554 5789999987444
Q ss_pred ccc-----------ccCC----------CChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhccceeEEecccccc
Q 013393 361 SEI-----------EERG----------CSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGWLSEVEPRI 419 (444)
Q Consensus 361 ~~~-----------~~~~----------c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 419 (444)
... .... -.+..++-++-|.|+|||++++.....-.++++++++...|+.. ....
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v-~~~~--- 262 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDV-ETCR--- 262 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTC-CEEE---
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEE-EEEe---
Confidence 311 0000 12467888999999999999997766667788888887777531 1111
Q ss_pred CCCCCCCceEEEEEe
Q 013393 420 DALSSSEERVLIAKK 434 (444)
Q Consensus 420 ~~~~~~~~~~l~~~k 434 (444)
...+.+++++++|
T Consensus 263 --d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 263 --DYGDNERVTLGRY 275 (276)
T ss_dssp --CTTSSEEEEEEEC
T ss_pred --cCCCCCcEEEEEE
Confidence 1235789998875
No 388
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.27 E-value=0.016 Score=55.96 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=72.3
Q ss_pred hhHHHHH-HHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhcc-----------c
Q 013393 267 GIWQVRV-VDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG-----------L 333 (444)
Q Consensus 267 ~~w~~~v-~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg-----------~ 333 (444)
+|-+..+ +.+...+...+ ..-..|+|+.++.|+++..|...+. -+|+-+|-. ..+...-+|- .
T Consensus 14 ~~~k~~l~~~~~~~l~~~~--~~~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 89 (313)
T 3bgv_A 14 NWMKSVLIGEFLEKVRQKK--KRDITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYI 89 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTC----CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CC
T ss_pred HHHHHHHHHHHHHHhhhcc--CCCCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhccccccc
Confidence 3334433 34555554222 2446899999999999998876543 256666643 4444433321 1
Q ss_pred --cccccccccCCC------CCCcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc
Q 013393 334 --IGTVHDWCESFS------TYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 334 --~~~~~~~~~~~~------~y~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
+-..+.=++.++ .-+.+||+|-+...+.....+.-+...+|-++-|+|+|||.+++...
T Consensus 90 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 90 FSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 122222233333 22459999998877652211212356899999999999999998644
No 389
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.25 E-value=0.013 Score=56.04 Aligned_cols=112 Identities=9% Similarity=0.065 Sum_probs=74.1
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHh----hccccc---cccccccCCCCCCcccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIY----DRGLIG---TVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~----~rg~~~---~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
..|+|+.++.|+|+..+...-.= .|+-++. +..+...- ..|+-. .++.=++.+.. +.+||++.++..++
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~~ 203 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVVR 203 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCSS
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCchh
Confidence 47999999999999877642110 3555553 23333322 225432 23333333433 67999997765433
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEeccH-------HHHHHHHHHHhhccceeEE
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-------SIINYIRKFITALKWDGWL 412 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-------~~~~~~~~~~~~~~w~~~~ 412 (444)
...++-++-|+|+|||.+++-+.. +.++++++.+....|++..
T Consensus 204 --------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 --------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred --------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 366788899999999999995443 5678889999999998864
No 390
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.19 E-value=0.0091 Score=53.65 Aligned_cols=97 Identities=11% Similarity=0.180 Sum_probs=61.5
Q ss_pred eEEEecccccchhhh-hccCCCceEEEeccccCC-CchhHHhh----ccc-cccccccccCCCCCCcccchhhccccccc
Q 013393 290 RNVMDMNSNLGGFAA-ALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL-IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a-~~~~~~~wv~~~~~~~~~-~~l~~~~~----rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
..|+|+.++.|.+++ .+..... +|+-++.. .-+...-+ .|. +-+.+.-.+.++.-+.+||+|.+.+++..
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 589999999998844 3333322 55555543 33433322 231 22222223334433589999999887764
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+. .-+...++-|+-|+|+|||.+++.+
T Consensus 102 ~~--~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 102 MR--KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 42 1247889999999999999999965
No 391
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.03 E-value=0.01 Score=59.04 Aligned_cols=101 Identities=13% Similarity=0.198 Sum_probs=65.1
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhh----ccccc----cccccccCCCCCCcccchhhcc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~----rg~~~----~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
.....|+|+..+-|.++.+|.+. |-. .|+-.|-+..+...-+ .|+-+ +-+|..+.=..+|.+||++.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEV--EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTC--EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC--EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 45689999999999999998642 322 3444444444443332 34322 2223322100367899999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+++..+... ....+|-++-|.|+|||.++|-|
T Consensus 256 ~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSEE--EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCHH--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 988744321 34678999999999999999854
No 392
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.01 E-value=0.048 Score=52.65 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=29.2
Q ss_pred eEEEECCCcchHHHHHhh--CCceEEEcCcccchHHHHH
Q 013393 47 NVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQ 83 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~--~~V~gvdis~~dis~a~i~ 83 (444)
+|||++||+|..+..+++ +.++|+|+++..+..+..+
T Consensus 238 ~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 238 VVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp EEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Confidence 899999999999988876 4688888887666544433
No 393
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.95 E-value=0.014 Score=55.42 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=74.8
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHH----hhccc-cccccccccCCCCCCcccchhhccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKII----YDRGL-IGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~----~~rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
-..|+|+.+|.|.++..|..... +|+-++-. .-+... -..|+ +-+++.=.+.++. +.+||+|.+..+|..
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 45799999999999999876632 56666643 444332 23343 2222222223333 799999999999874
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEecc--------------HHHHHHHHHHHhhccceeE
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRDK--------------SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd~--------------~~~~~~~~~~~~~~~w~~~ 411 (444)
+. .-.+..++-++-|+|+|||.++|-.. .-.-++++++... |++.
T Consensus 197 ~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 197 LN--RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp SC--GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred CC--HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEE
Confidence 42 23577899999999999999776321 1113466677666 7774
No 394
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=94.95 E-value=0.031 Score=49.87 Aligned_cols=83 Identities=14% Similarity=0.205 Sum_probs=44.4
Q ss_pred cccchhhccccccccccCC-------CChhhhhhhhcccccCCcEEEEeccH-HHHHHHHHHHhhccceeEEeccccccC
Q 013393 349 RTYDLLHAWKVFSEIEERG-------CSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWDGWLSEVEPRID 420 (444)
Q Consensus 349 ~~~dl~h~~~~~~~~~~~~-------c~~~~~~~e~drilrp~g~~~~rd~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~ 420 (444)
.+||++-++..+.....+. -....++-++-|+|+|||.+++.... +...++...+... |.. +....+..+
T Consensus 105 ~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~-v~~~~~~~~ 182 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQL-VHTTKPKAS 182 (201)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEE-EEECCCC--
T ss_pred CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hhe-EEEECCccc
Confidence 6899999887654110000 00124788899999999999984211 1233444444443 332 122222211
Q ss_pred CCCCCCceEEEEEe
Q 013393 421 ALSSSEERVLIAKK 434 (444)
Q Consensus 421 ~~~~~~~~~l~~~k 434 (444)
...+.|..+||++
T Consensus 183 -r~~s~e~y~v~~~ 195 (201)
T 2plw_A 183 -RNESREIYLVCKN 195 (201)
T ss_dssp ----CCEEEEEEEE
T ss_pred -CCcCceEEEEEec
Confidence 1234688999986
No 395
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.94 E-value=0.027 Score=54.94 Aligned_cols=122 Identities=14% Similarity=0.173 Sum_probs=78.1
Q ss_pred hccCCceeEEEecccccchhhhhccC-CCceEEEeccccCCCchhH----Hhhccccc----cccccccCCCCCCcccch
Q 013393 283 VAQKNTFRNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMSARLKI----IYDRGLIG----TVHDWCESFSTYPRTYDL 353 (444)
Q Consensus 283 ~l~~~~~rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~~~~l~~----~~~rg~~~----~~~~~~~~~~~y~~~~dl 353 (444)
.+.......|+|..++-|.++.+|.+ .|-. .++-.|-+..+.. +.+.|+-+ +-+|..++ .|-+||+
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D~ 238 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHEDL--SGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAGG 238 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCSE
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCCCC--eEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCcE
Confidence 34556778999999999999988864 2321 2222233333332 22335422 23444444 4558999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH----------------------HHHHHHHHHHhhccceeE
Q 013393 354 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 354 ~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~----------------------~~~~~~~~~~~~~~w~~~ 411 (444)
+.+.+++..+... ....+|-++=|.|+|||.++|-|.. ...++++++++.-.++..
T Consensus 239 v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 239 YVLSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred EEEehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 9999998743321 2578999999999999999996541 114566777777777663
No 396
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.89 E-value=0.011 Score=54.27 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=71.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc--ccccccccccCCCCC-Ccccchhhcccccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG--LIGTVHDWCESFSTY-PRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg--~~~~~~~~~~~~~~y-~~~~dl~h~~~~~~~~~~ 365 (444)
..|+|+.++-|.++..|.... .+|+-++- +..+...-++. +-=+-.|+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 479999999999999998763 25666664 35555555552 212234555666643 5899999865
Q ss_pred CCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhcccee
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDG 410 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~ 410 (444)
-+...++-++-|+|||||.++.-.......++.+.+..-.++.
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 1366888999999999999984322223344555555544443
No 397
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.85 E-value=0.078 Score=51.21 Aligned_cols=110 Identities=11% Similarity=0.018 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCeEEEECC------CcchHHH-HHhhC--CceEEEcCcccchHHHHHHHHHcCCC
Q 013393 21 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGC------GVASFGA-YLLSH--DIIAMSLAPNDVHENQIQFALERGIP 91 (444)
Q Consensus 21 ~~~y~~~l~~~l~~~~~~L~~g~~~~rVLDVGC------GtG~~a~-~La~~--~V~gvdis~~dis~a~i~~a~e~~~~ 91 (444)
+.+|.+. -+.+.-..-..+.+. +|||+|+ -.|++.. .+... .++++|+.+... ..+
T Consensus 90 v~kytql-cqyl~~~~~~vp~gm---rVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~ 154 (344)
T 3r24_A 90 VAKYTQL-CQYLNTLTLAVPYNM---RVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD 154 (344)
T ss_dssp HHHHHHH-HHHHTTSCCCCCTTC---EEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS
T ss_pred HHHHHHH-HHHhccccEeecCCC---EEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC
Confidence 4555443 334432222445555 9999997 5666432 23233 578888888642 112
Q ss_pred cEEEEecCccCCCCCCCccEEEeccc---cccc-c-----ccH-HHHHHHHHhhcCCCeEEEEEcC
Q 013393 92 STLGVLGTKRLPYPSRSFELAHCSRC---RIDW-L-----QRD-GILLLELDRLLRPGGYFVYSSP 147 (444)
Q Consensus 92 ~~~~~~d~~~lp~~~~sFDlI~~~~~---~l~~-~-----~d~-~~~L~ei~rvLkPGG~lvis~p 147 (444)
.+.++|..... ..++||+|+|-.+ .-+- . ... +.++.=+.++|+|||-|++-..
T Consensus 155 -~~IqGD~~~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 155 -STLIGDCATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp -EEEESCGGGEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -eEEEccccccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 44677754433 2478999998421 0110 0 112 3456666779999999998543
No 398
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.83 E-value=0.017 Score=55.35 Aligned_cols=98 Identities=10% Similarity=0.189 Sum_probs=58.7
Q ss_pred eeEEEecccccchhhhh----ccC-CCceEEEeccccC-CCchhHHhhc-----ccccccccc----ccCCC------CC
Q 013393 289 FRNVMDMNSNLGGFAAA----LKD-KDVWVMNVAPVRM-SARLKIIYDR-----GLIGTVHDW----CESFS------TY 347 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~----~~~-~~~wv~~~~~~~~-~~~l~~~~~r-----g~~~~~~~~----~~~~~------~y 347 (444)
=..|+|+.+|-|.++.. +.. .|-+...++=++. +.-|...-+| |+-.+--.| .|.++ .-
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 34799999999986543 222 1322112344442 2444433332 321111111 11221 12
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+.+||+|++..++-.+. +....|-||-|+|+|||.+++-
T Consensus 133 ~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVK----DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCS----CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecC----CHHHHHHHHHHHcCCCcEEEEE
Confidence 48999999999988442 4788999999999999999984
No 399
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.82 E-value=0.018 Score=55.35 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=25.5
Q ss_pred eEEEECCCcchHHHHHhhC--CceEEEcCcccc
Q 013393 47 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDV 77 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~--~V~gvdis~~di 77 (444)
.+||.+||.|..+..++++ .|+|+|.++..+
T Consensus 25 ~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai 57 (285)
T 1wg8_A 25 VYVDATLGGAGHARGILERGGRVIGLDQDPEAV 57 (285)
T ss_dssp EEEETTCTTSHHHHHHHHTTCEEEEEESCHHHH
T ss_pred EEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHH
Confidence 8999999999999999985 577777666443
No 400
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=94.82 E-value=0.033 Score=52.44 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=73.8
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc-ccccc-ccccCCCCCCcccchhhccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL-IGTVH-DWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~-~~~~~-~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
..|+|+.+|.|.++.++..... +|+-++- +..+...-+ .|+ +-+++ |..+.++ +.+||+|.++.++.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~- 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAE- 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHH-
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHH-
Confidence 4899999999999888765433 5555553 344444333 243 22222 3333332 46899999876554
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhccceeE
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGW 411 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~w~~~ 411 (444)
.+..++-++-|+|+|||.+++.+ ...-.+++++.++...++..
T Consensus 196 ------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 196 ------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPL 239 (254)
T ss_dssp ------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEE
T ss_pred ------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEE
Confidence 25788999999999999999854 23346778888887778764
No 401
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.70 E-value=0.031 Score=51.77 Aligned_cols=98 Identities=16% Similarity=0.291 Sum_probs=61.9
Q ss_pred CceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhh----ccc-cccccccccCCCCCCcccchhhccc-c
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYD----RGL-IGTVHDWCESFSTYPRTYDLLHAWK-V 359 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~----rg~-~~~~~~~~~~~~~y~~~~dl~h~~~-~ 359 (444)
..-..|+|+.++-|.++..|..... +|+-++- +..+...-+ .|+ +-..+.-.+.++ .|.+||+|.+.. .
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAVTMFFST 115 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEEEECSSG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc-cCCCccEEEEcCCc
Confidence 3446899999999999999876542 5666664 344444332 232 222222222333 468999997642 2
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+... ..-+...++-++-|+|+|||.+++.
T Consensus 116 ~~~~--~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 116 IMYF--DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGS--CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC--CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2211 1124678899999999999999984
No 402
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.66 E-value=0.005 Score=56.49 Aligned_cols=134 Identities=11% Similarity=0.015 Sum_probs=77.8
Q ss_pred eeEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHh----hcccc---c-cccccccCCCCCC-----cccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIY----DRGLI---G-TVHDWCESFSTYP-----RTYD 352 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~----~rg~~---~-~~~~~~~~~~~y~-----~~~d 352 (444)
-.+|+|+.++.|.++..|... +- -.|+-++. +..+.++- ..|+- - +..|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPG--ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 468999999999999888652 21 24555553 23344322 23442 2 2234445455555 6899
Q ss_pred hhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc-----HHHHHHHHHHHhhccceeEEeccccccCCCCCCCc
Q 013393 353 LLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKWDGWLSEVEPRIDALSSSEE 427 (444)
Q Consensus 353 l~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~-----~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 427 (444)
+|.+++.... +. +...++-++ |.|||||.+++.|. .++++.+++ .=++++...-..-+ .....+
T Consensus 137 ~V~~d~~~~~-~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~---~~~~~d 205 (221)
T 3u81_A 137 MVFLDHWKDR-YL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLE---YMKVVD 205 (221)
T ss_dssp EEEECSCGGG-HH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEET---TTTEEE
T ss_pred EEEEcCCccc-ch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccc---cCCCCC
Confidence 9988875552 21 234566678 99999999999653 455555544 23465543210001 111246
Q ss_pred eEEEEEec
Q 013393 428 RVLIAKKK 435 (444)
Q Consensus 428 ~~l~~~k~ 435 (444)
.+.++.++
T Consensus 206 G~~~~~~~ 213 (221)
T 3u81_A 206 GLEKAIYQ 213 (221)
T ss_dssp EEEEEEEC
T ss_pred ceEEEEEe
Confidence 78887764
No 403
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.61 E-value=0.029 Score=55.53 Aligned_cols=143 Identities=16% Similarity=0.129 Sum_probs=84.5
Q ss_pred cCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHh----hcccc----ccccccccCCCCCCcccchhh
Q 013393 285 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLI----GTVHDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 285 ~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~----~rg~~----~~~~~~~~~~~~y~~~~dl~h 355 (444)
....-..|+|+.++.|.++.+|.+. |-+ +++-+|-+..+...- +.|+- =+-+|..++ .|..||++.
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 253 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHL--RGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP---LPVTADVVL 253 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSCCEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCC--EEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CCCCCCEEE
Confidence 3445678999999999999988643 321 233333233333222 23432 123444443 455699999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEecc--H--H-----------------------HHHHHHHHHhhccc
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK--S--S-----------------------IINYIRKFITALKW 408 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~--~--~-----------------------~~~~~~~~~~~~~w 408 (444)
+.+++..+... ....+|-++-|+|+|||.++|-|. . + ..+++++++..-.+
T Consensus 254 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 331 (374)
T 1qzz_A 254 LSFVLLNWSDE--DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331 (374)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTE
T ss_pred EeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 99988743321 235799999999999999998765 2 1 24566777777777
Q ss_pred eeEEeccccccCCCCCCCceEEEEEecc
Q 013393 409 DGWLSEVEPRIDALSSSEERVLIAKKKL 436 (444)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~l~~~k~~ 436 (444)
+.... ... .+..-.....++.++|.=
T Consensus 332 ~~~~~-~~~-~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 332 ALASE-RTS-GSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEEE-EEE-CCSSCSSCEEEEEEEECC
T ss_pred ceEEE-EEC-CCCcccCCcEEEEEEECc
Confidence 75321 111 111000012788888863
No 404
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.60 E-value=0.033 Score=54.21 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=66.3
Q ss_pred cCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhh----ccc----cccccccccCCCCCCcccchhh
Q 013393 285 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGL----IGTVHDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 285 ~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~----rg~----~~~~~~~~~~~~~y~~~~dl~h 355 (444)
.... ..|+|+..+.|.++.+|.+. |-. .++-+|-+..+...-+ .|+ --+-+|..+ .+|.+||++.
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~ 238 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIYL 238 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEEE
Confidence 3444 89999999999999988643 322 3444444444443322 232 223345544 3578899999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+.+++..+... ....+|-++-|.|+|||.++|-|
T Consensus 239 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 239 LSRIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EESCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EchhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 99988744322 24689999999999999999864
No 405
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.59 E-value=0.015 Score=54.10 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc-----cccccccccCCCCCCcccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-----IGTVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~-----~~~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
..|+|+.+|.|.+|..+.+... -+|+-++- +.-+...-++ |+ .|-..+....|+. .+||.|..+-+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~FD~i~~D~~ 137 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEECCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc--cCCceEEEeee
Confidence 5799999999999999977542 34555553 3444443332 22 2222333445553 78999977766
Q ss_pred ccccc-cCCCChhhhhhhhcccccCCcEEEEe
Q 013393 360 FSEIE-ERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 360 ~~~~~-~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
.+... .+.-+...++-|+-|+|||||.+++-
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 55211 11223567888999999999999884
No 406
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.59 E-value=0.18 Score=49.12 Aligned_cols=73 Identities=11% Similarity=0.102 Sum_probs=48.6
Q ss_pred EEEEecCcc-CC-CCCCCccEEEeccccccccccH----HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHH
Q 013393 93 TLGVLGTKR-LP-YPSRSFELAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDL 166 (444)
Q Consensus 93 ~~~~~d~~~-lp-~~~~sFDlI~~~~~~l~~~~d~----~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l 166 (444)
.+..+|+.. ++ +++..||+|+.-. +.-..++ ..+|++++++++|||.|+--+ . -..+++-
T Consensus 169 ~l~~GDa~~~l~~l~~~~~Da~flDg--FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt-------a-----ag~VRR~ 234 (308)
T 3vyw_A 169 KVLLGDARKRIKEVENFKADAVFHDA--FSPYKNPELWTLDFLSLIKERIDEKGYWVSYS-------S-----SLSVRKS 234 (308)
T ss_dssp EEEESCHHHHGGGCCSCCEEEEEECC--SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC-------C-----CHHHHHH
T ss_pred EEEechHHHHHhhhcccceeEEEeCC--CCcccCcccCCHHHHHHHHHHhCCCcEEEEEe-------C-----cHHHHHH
Confidence 455566433 33 3445799999643 1112233 489999999999999998411 1 1367888
Q ss_pred HHhcCeEEEeeec
Q 013393 167 LKSMCWKIVSKKD 179 (444)
Q Consensus 167 ~~~~gf~~v~~~~ 179 (444)
++++||++....+
T Consensus 235 L~~aGF~V~k~~G 247 (308)
T 3vyw_A 235 LLTLGFKVGSSRE 247 (308)
T ss_dssp HHHTTCEEEEEEC
T ss_pred HHHCCCEEEecCC
Confidence 9999999877655
No 407
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.59 E-value=0.034 Score=54.80 Aligned_cols=111 Identities=16% Similarity=0.089 Sum_probs=65.8
Q ss_pred HHHHHHhhhhccCCceeEEEecccccchhhhhccCCCceEEEeccccCCCchhH----Hhhccc---cccccccccCCCC
Q 013393 274 VDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFST 346 (444)
Q Consensus 274 ~~y~~~l~~~l~~~~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~----~~~rg~---~~~~~~~~~~~~~ 346 (444)
..|...+.+.+....=..|+|+.+|.|.++..+...+. -.|+=++...-+.. +-+.|+ |-+.+.-.+.++
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 126 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH- 126 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-
Confidence 34544443333333335899999999999888765542 13444443322332 223344 333443344443
Q ss_pred CC-cccchhhccccccccccCCCChhhhhhhhcccccCCcEEE
Q 013393 347 YP-RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVI 388 (444)
Q Consensus 347 y~-~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~ 388 (444)
+| .+||+|-+..+...+. +.-.+..++-++.|+|+|||.++
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLL-FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBT-TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhcc-CHHHHHHHHHHHHhhcCCCcEEE
Confidence 34 7999999876422121 11246678999999999999998
No 408
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.47 E-value=0.13 Score=44.95 Aligned_cols=129 Identities=15% Similarity=0.153 Sum_probs=82.4
Q ss_pred EEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccccccccccccCCCCCCcccchhhccccccccccC---
Q 013393 291 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER--- 366 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~~--- 366 (444)
.|+|+.+|-|.++.+|...- +|+=++-. .-+.. ...+-=+-.|..++++ +.+||+|-++-.|......
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCccccc
Confidence 89999999999999998765 67666643 33333 2222223334444433 3899999998776522111
Q ss_pred --CCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhccceeEEeccccccCCCCCCCceEEEEEe
Q 013393 367 --GCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAKK 434 (444)
Q Consensus 367 --~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k 434 (444)
......++-++=|.| |||.+++-. .....+++.++++...|+...... .. .+.|++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~--~~----~~~e~~~~~~~ 161 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKV--RK----ILGETVYIIKG 161 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEE--EE----CSSSEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEe--ec----cCCceEEEEEE
Confidence 122355666777777 999998854 445678888999988898753321 11 12467776553
No 409
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.46 E-value=0.017 Score=52.71 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=75.3
Q ss_pred eEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHHh----hcccc---ccc-cccccCCCCCC-----cccch
Q 013393 290 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIY----DRGLI---GTV-HDWCESFSTYP-----RTYDL 353 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~~----~rg~~---~~~-~~~~~~~~~y~-----~~~dl 353 (444)
..|+|+.++.|.++..|... | - -.|+-++. +..+...- ..|+- -+. .|..+.++..+ .+||+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 48999999999999988764 2 1 23454543 23333322 22432 122 23334333333 78999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------HHHHHHHHHHhh----ccceeEEecccc
Q 013393 354 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------SIINYIRKFITA----LKWDGWLSEVEP 417 (444)
Q Consensus 354 ~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------~~~~~~~~~~~~----~~w~~~~~~~~~ 417 (444)
|..++-.. ....++-++=|.|+|||.+++.|.. .....++.+... -+|++...
T Consensus 144 v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l---- 212 (225)
T 3tr6_A 144 IYIDADKA-------NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI---- 212 (225)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE----
T ss_pred EEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE----
Confidence 98665322 3566788888999999999996543 122334444333 34665432
Q ss_pred ccCCCCCCCceEEEEEec
Q 013393 418 RIDALSSSEERVLIAKKK 435 (444)
Q Consensus 418 ~~~~~~~~~~~~l~~~k~ 435 (444)
|. .+.+++++|+
T Consensus 213 ---p~---~dG~~~~~k~ 224 (225)
T 3tr6_A 213 ---PI---GDGLTLARKK 224 (225)
T ss_dssp ---CS---TTCEEEEEEC
T ss_pred ---Ec---CCccEEEEEC
Confidence 22 4678998885
No 410
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.43 E-value=0.056 Score=52.20 Aligned_cols=94 Identities=20% Similarity=0.248 Sum_probs=56.7
Q ss_pred CcEEEEecCcc-CC-CCCCCccEEEeccccc---c----------------ccccHHHHHHHHHhhcCCCeEEEEEcCCC
Q 013393 91 PSTLGVLGTKR-LP-YPSRSFELAHCSRCRI---D----------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 149 (444)
Q Consensus 91 ~~~~~~~d~~~-lp-~~~~sFDlI~~~~~~l---~----------------~~~d~~~~L~ei~rvLkPGG~lvis~p~~ 149 (444)
...+..+|..+ ++ +++++||+|+++--.. . +......++.++.|+|||||.+++.....
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 34566777544 33 4578999999974211 1 11112457889999999999999865532
Q ss_pred CC-CChhh----HHHHHHHHHHHHhcCeEEEeeecceeEeeccC
Q 013393 150 YA-HDPEN----RRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 188 (444)
Q Consensus 150 ~~-~~~~~----~~~~~~l~~l~~~~gf~~v~~~~~~~~w~k~l 188 (444)
.. ..... ......+..++++.||.... ..+|.|+.
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 20 00000 01234677788899996653 45899874
No 411
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=94.40 E-value=0.039 Score=51.58 Aligned_cols=128 Identities=11% Similarity=0.098 Sum_probs=72.8
Q ss_pred eeEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchh----HHhhcccc---cccc-ccccCCCCC-----Ccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLK----IIYDRGLI---GTVH-DWCESFSTY-----PRTYD 352 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~----~~~~rg~~---~~~~-~~~~~~~~y-----~~~~d 352 (444)
-++|+|+.++.|.++..|... | - -.|+-++. +..+. .+-..|+- -+.+ |-.+.++.. +.+||
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDD--GQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTT--CEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 358999999999998887642 1 1 12333332 22222 23333542 2222 333333333 47899
Q ss_pred hhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------HHHHHHHHHHhhc----cceeEEeccc
Q 013393 353 LLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------SIINYIRKFITAL----KWDGWLSEVE 416 (444)
Q Consensus 353 l~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------~~~~~~~~~~~~~----~w~~~~~~~~ 416 (444)
+|.++.-.. ....++-++-|+|||||.+++.|.. .....++++.+.+ ++++.+.
T Consensus 139 ~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--- 208 (242)
T 3r3h_A 139 FIFIDADKT-------NYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--- 208 (242)
T ss_dssp EEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE---
T ss_pred EEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE---
Confidence 997766422 2456777888999999999995432 1223344444444 4554322
Q ss_pred cccCCCCCCCceEEEEEec
Q 013393 417 PRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 417 ~~~~~~~~~~~~~l~~~k~ 435 (444)
|. .+.+++++|+
T Consensus 209 ----p~---~dG~~~~~k~ 220 (242)
T 3r3h_A 209 ----AI---ADGMFLVQPI 220 (242)
T ss_dssp ----SS---SSCEEEEEEC
T ss_pred ----Ec---cCceEEEEEc
Confidence 22 4679999875
No 412
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.23 E-value=0.043 Score=49.79 Aligned_cols=120 Identities=15% Similarity=0.147 Sum_probs=74.6
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh----ccc--cccccccccCCC--CCCcccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RGL--IGTVHDWCESFS--TYPRTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~----rg~--~~~~~~~~~~~~--~y~~~~dl~h~~~~ 359 (444)
..|+|+.+|-|.++.+|... |- .+|+-++- +.-+...-+ .|+ +-+++.=.+.++ .-+.+||+|.++..
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CeEEEEccCcCHHHHHHHHHCCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 36999999999999888642 21 25666664 344443322 343 222222222233 22578999987733
Q ss_pred ccc----cccCCCChhhhhhhhcccccCCcEEEEe-ccHHHHHHHHHHHhhccceeE
Q 013393 360 FSE----IEERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITALKWDGW 411 (444)
Q Consensus 360 ~~~----~~~~~c~~~~~~~e~drilrp~g~~~~r-d~~~~~~~~~~~~~~~~w~~~ 411 (444)
... -.+++-....++-++-|+|+|||.+++. |..+..+.+.+++....|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 210 0112223467999999999999999887 466677888888877777764
No 413
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=94.06 E-value=0.05 Score=53.55 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=74.7
Q ss_pred hccCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchh--HHhhccccc----cccccccCCCCCCcccchhh
Q 013393 283 VAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLK--IIYDRGLIG----TVHDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 283 ~l~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~--~~~~rg~~~----~~~~~~~~~~~y~~~~dl~h 355 (444)
.+..+....|+|+..+.|.++.+|.+. |-. .++-.|-+..+. .+-..|+-+ +-+|..+ ..| +||++.
T Consensus 179 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 179 AGDFPATGTVADVGGGRGGFLLTVLREHPGL--QGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp HSCCCSSEEEEEETCTTSHHHHHHHHHCTTE--EEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred hCCccCCceEEEECCccCHHHHHHHHHCCCC--EEEEecCHHHhhcccccccCCCCCeEEEecCCCC---CCC-CCcEEE
Confidence 345567789999999999999988642 321 222222221111 001123322 2234333 456 999999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEeccH-------------------------HHHHHHHHHHhhcccee
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-------------------------SIINYIRKFITALKWDG 410 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-------------------------~~~~~~~~~~~~~~w~~ 410 (444)
+.+++..+... ....+|-++-|.|||||.++|-|.. ...++++++++.-.++.
T Consensus 253 ~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 253 LKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred EehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 99988743221 2368999999999999999996521 12456677777777776
Q ss_pred E
Q 013393 411 W 411 (444)
Q Consensus 411 ~ 411 (444)
.
T Consensus 331 ~ 331 (348)
T 3lst_A 331 D 331 (348)
T ss_dssp E
T ss_pred E
Confidence 3
No 414
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.96 E-value=0.06 Score=53.49 Aligned_cols=140 Identities=13% Similarity=0.161 Sum_probs=86.3
Q ss_pred hccCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhH----Hhhccccc----cccccccCCCCCCcccch
Q 013393 283 VAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKI----IYDRGLIG----TVHDWCESFSTYPRTYDL 353 (444)
Q Consensus 283 ~l~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~----~~~rg~~~----~~~~~~~~~~~y~~~~dl 353 (444)
.+.......|+|+.++.|.++.+|.+. |-. .++-.|-+..+.. +-+.|+-+ +-+|..++ +|..||+
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p~~~D~ 271 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGL--RGTLLERPPVAEEARELLTGRGLADRCEILPGDFFET---IPDGADV 271 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CCSSCSE
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCC--eEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCC---CCCCceE
Confidence 345567789999999999999988643 211 2222333333332 22334422 23444444 4558999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------------------HHHHHHHHHHhhccce
Q 013393 354 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------------------SIINYIRKFITALKWD 409 (444)
Q Consensus 354 ~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------------------~~~~~~~~~~~~~~w~ 409 (444)
+-+.+++..+... ....+|-++-|.|+|||.++|-|.. -..++.+++++.-.++
T Consensus 272 v~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 272 YLIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred EEhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 9999998743221 2346899999999999999995421 1145677888877887
Q ss_pred eEEeccccccCCCCCCCceEEEEEec
Q 013393 410 GWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
.... .. ...+...++.|+|.
T Consensus 350 ~~~~-~~-----~~~~~~svie~~~a 369 (369)
T 3gwz_A 350 VERS-LP-----CGAGPVRIVEIRRA 369 (369)
T ss_dssp EEEE-EE-----CSSSSEEEEEEEEC
T ss_pred EEEE-EE-----CCCCCcEEEEEEeC
Confidence 6422 21 01124678888763
No 415
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.77 E-value=0.022 Score=55.91 Aligned_cols=139 Identities=10% Similarity=0.094 Sum_probs=86.0
Q ss_pred ccCCc-eeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHH----hhccccc----cccccccCCCCCCcccch
Q 013393 284 AQKNT-FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKII----YDRGLIG----TVHDWCESFSTYPRTYDL 353 (444)
Q Consensus 284 l~~~~-~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~----~~rg~~~----~~~~~~~~~~~y~~~~dl 353 (444)
+.... ...|+|+..+.|.++.+|.+. |- ..++-++-+..+... -+.|+-+ +-+|..+.-+..|..||+
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQ--LTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTT--CEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCC--CeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccE
Confidence 44445 789999999999999988642 32 123333334444332 2234422 233433321125788999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH-------H--------------------HHHHHHHHHhhc
Q 013393 354 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-------S--------------------IINYIRKFITAL 406 (444)
Q Consensus 354 ~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-------~--------------------~~~~~~~~~~~~ 406 (444)
+.+.+++..+.. -....+|-++-|.|+|||.++|-|.. . ..+++++++..-
T Consensus 252 v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (352)
T 3mcz_A 252 VMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDA 329 (352)
T ss_dssp EEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHT
T ss_pred EEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHC
Confidence 999999874432 13578999999999999999996520 0 134466666666
Q ss_pred cceeEEeccccccCCCCCCCceEEEEEec
Q 013393 407 KWDGWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 407 ~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
.++..... .+...+++++|+
T Consensus 330 Gf~~~~~~---------~g~~~l~~a~kp 349 (352)
T 3mcz_A 330 GLAVGERS---------IGRYTLLIGQRS 349 (352)
T ss_dssp TCEEEEEE---------ETTEEEEEEECC
T ss_pred CCceeeec---------cCceEEEEEecC
Confidence 67663211 124678999985
No 416
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=93.75 E-value=0.019 Score=53.02 Aligned_cols=100 Identities=12% Similarity=0.130 Sum_probs=60.3
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcc----c-ccccc-ccc---cCCCCCCcccchhhcc-c
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG----L-IGTVH-DWC---ESFSTYPRTYDLLHAW-K 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg----~-~~~~~-~~~---~~~~~y~~~~dl~h~~-~ 358 (444)
..|+|+.+|-|.++..|...+. -+|+=++. +.-+...-++. . +-+++ |+. .+|+ +.+||+|.++ .
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~fD~V~~d~~ 137 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP--DGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC--TTCEEEEEECCC
T ss_pred CeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC--CCceEEEEECCc
Confidence 5799999999999999977543 25555554 34444433332 1 11122 222 2343 4899999883 2
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEeccH
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 393 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~ 393 (444)
.++....+.-....++-|+-|+|||||.+++-+-.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 21211111112346799999999999999986533
No 417
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=93.63 E-value=0.098 Score=48.84 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=78.2
Q ss_pred eeEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHHhhc----cccc----cccccccCCCCCCc--ccchhh
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIYDR----GLIG----TVHDWCESFSTYPR--TYDLLH 355 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~~~r----g~~~----~~~~~~~~~~~y~~--~~dl~h 355 (444)
-..|+|+.++.|+++..|... | - -.|+-++- +..+..+-++ |+-. +..|..+.++..+. +||+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 368999999999999888753 1 1 24555553 3444443332 4421 22344443444444 899998
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------HHHHHHHHHHh----hccceeEEe-ccccc
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------SIINYIRKFIT----ALKWDGWLS-EVEPR 418 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------~~~~~~~~~~~----~~~w~~~~~-~~~~~ 418 (444)
++.-.. ....++-++=|+|||||.+++.|.. .....++++.. .-+|++... .+
T Consensus 142 ~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~--- 211 (248)
T 3tfw_A 142 IDADKP-------NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV--- 211 (248)
T ss_dssp ECSCGG-------GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC---
T ss_pred ECCchH-------HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC---
Confidence 766322 2456788888999999999985432 12334444443 335665432 11
Q ss_pred cCCCCCCCceEEEEEec
Q 013393 419 IDALSSSEERVLIAKKK 435 (444)
Q Consensus 419 ~~~~~~~~~~~l~~~k~ 435 (444)
+ ..+.+.+.+++|+
T Consensus 212 -g--~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 212 -G--TKGWDGFTLAWVN 225 (248)
T ss_dssp -S--TTCSEEEEEEEEC
T ss_pred -C--CCCCCeeEEEEEe
Confidence 0 1124789999886
No 418
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=93.55 E-value=0.03 Score=56.67 Aligned_cols=113 Identities=12% Similarity=0.162 Sum_probs=70.2
Q ss_pred eeEEEecccc------cchhhhhccCC--CceEEEeccccCCCchhHHhhccccccccccccCCCCC------Ccccchh
Q 013393 289 FRNVMDMNSN------LGGFAAALKDK--DVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFSTY------PRTYDLL 354 (444)
Q Consensus 289 ~rnvmDm~a~------~G~f~a~~~~~--~~wv~~~~~~~~~~~l~~~~~rg~~~~~~~~~~~~~~y------~~~~dl~ 354 (444)
-.+|+|+.++ -||.+..|... |- -.|+=+|-.... +....=|=+..-=++.+++- +.+||+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~--a~V~GVDiSp~m--~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR--GQIYGLDIMDKS--HVDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTT--CEEEEEESSCCG--GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHH--hhcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 3689999999 57776666432 21 134444432111 11111111222122232222 3789999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCcEEEEec------------------cHHHHHHHHHHHhhcccee
Q 013393 355 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD------------------KSSIINYIRKFITALKWDG 410 (444)
Q Consensus 355 h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd------------------~~~~~~~~~~~~~~~~w~~ 410 (444)
.+++... . .+....|-|+=|+|||||.++|.| ...+++.+++++..++|+.
T Consensus 293 isdgsH~--~---~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 293 IDDGSHI--N---AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EECSCCC--H---HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred EECCccc--c---hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 9876422 1 236778999999999999999954 3468999999999999875
No 419
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=93.35 E-value=0.053 Score=49.28 Aligned_cols=93 Identities=13% Similarity=0.056 Sum_probs=58.4
Q ss_pred eEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHHh----hccccc---cc-cccccCCCCCC----cccchh
Q 013393 290 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIY----DRGLIG---TV-HDWCESFSTYP----RTYDLL 354 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~~----~rg~~~---~~-~~~~~~~~~y~----~~~dl~ 354 (444)
..|+|+.++.|+++..|... | - ..|+-++- +..+..+- ..|+-. +. .|..+.++..+ .+||+|
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSG--GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSS--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 58999999999999988754 1 1 14555553 34444332 225422 22 23333222222 579999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 355 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 355 h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
..+...+ ....++-++-|+|||||.+++.|
T Consensus 138 ~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 138 FIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 8776533 24577888999999999999854
No 420
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.02 E-value=0.096 Score=47.70 Aligned_cols=116 Identities=13% Similarity=0.192 Sum_probs=72.0
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHh----hccc--cccc-cccccCCC--CCCcccchhhccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGL--IGTV-HDWCESFS--TYPRTYDLLHAWK 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~----~rg~--~~~~-~~~~~~~~--~y~~~~dl~h~~~ 358 (444)
..|+|+.+|.|.++.+|... |- .+|+=++-. .-+...- +.|+ +-+. .|..+ ++ .-+.++|.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~- 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN- 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE-
T ss_pred ceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE-
Confidence 36999999999999988642 32 256666643 3333322 2354 2222 23322 22 124789988653
Q ss_pred ccccc------ccCCCChhhhhhhhcccccCCcEEEEe-ccHHHHHHHHHHHhhcccee
Q 013393 359 VFSEI------EERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITALKWDG 410 (444)
Q Consensus 359 ~~~~~------~~~~c~~~~~~~e~drilrp~g~~~~r-d~~~~~~~~~~~~~~~~w~~ 410 (444)
|+.- .+++-....++-++-|+|+|||.+++. |..+..+.+...+....|+.
T Consensus 116 -~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 116 -FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp -SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred -CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 2211 122333578899999999999999886 56667777777776666654
No 421
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=92.92 E-value=0.044 Score=50.06 Aligned_cols=90 Identities=13% Similarity=0.210 Sum_probs=58.0
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----c-ccccccccccCCCCCCcccchhhccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----G-LIGTVHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g-~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
-..|+|+.+|.|.++..|...- -+|+-++- +..+...-++ | +-=+..|..+.++ -+.+||+|.+++.+..
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHH
Confidence 3489999999999999887643 35555553 3444443333 1 1112234444232 2478999999987763
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEecc
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
+. -++-|+|+|||.+++-..
T Consensus 147 ~~----------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 147 LL----------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CC----------HHHHHTEEEEEEEEEEEC
T ss_pred HH----------HHHHHHcCCCcEEEEEEc
Confidence 22 378899999999998754
No 422
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=92.87 E-value=0.038 Score=52.07 Aligned_cols=62 Identities=10% Similarity=0.059 Sum_probs=45.2
Q ss_pred cccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEeccH----------------HHHHHHHHHHhhcccee
Q 013393 349 RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------SIINYIRKFITALKWDG 410 (444)
Q Consensus 349 ~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~----------------~~~~~~~~~~~~~~w~~ 410 (444)
.+||+|-++.++..+..+.=++..+|-+|-|+|+|||.+++.+.. -..+++.+++..-..++
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 589999999998743222224678899999999999999998521 13557777777666655
No 423
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=92.84 E-value=0.079 Score=47.75 Aligned_cols=92 Identities=18% Similarity=0.088 Sum_probs=58.1
Q ss_pred eEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHH----hhcccc---ccc-cccccCCCCCCcccchhhccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKII----YDRGLI---GTV-HDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~----~~rg~~---~~~-~~~~~~~~~y~~~~dl~h~~~ 358 (444)
..|+|+.++.|.++..|... | - -+|+-++- +..+... -..|+- -+. .|..+.++..+. ||+|.++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISIS--SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 48999999999999888653 1 1 23444443 2333322 223442 222 234444455567 99997763
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
- ......++-++-|+|+|||.+++.|
T Consensus 135 ~-------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D-------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T-------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C-------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1 2356788899999999999999965
No 424
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=92.55 E-value=0.22 Score=46.54 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=57.6
Q ss_pred eeEEEecccccchhhhhccCC--C-ceEEEeccccC----CCchhHHh----hccc---ccccc-c-c-ccCCCCCCccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK--D-VWVMNVAPVRM----SARLKIIY----DRGL---IGTVH-D-W-CESFSTYPRTY 351 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~--~-~wv~~~~~~~~----~~~l~~~~----~rg~---~~~~~-~-~-~~~~~~y~~~~ 351 (444)
-..|+|+.++.|.++..|.+. | .=|.-|=+... |..+...- +.|+ +-+.+ | . .+..+.-+.+|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 358999999999999888653 2 33333333221 22455432 2233 22222 2 2 12222234899
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 352 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 352 dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
|+|++.+++..... ...++-.+.++++|||.+++.+
T Consensus 124 D~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 124 DRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp SEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 99999999874432 3445555566666799999953
No 425
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.51 E-value=0.069 Score=51.76 Aligned_cols=99 Identities=22% Similarity=0.274 Sum_probs=63.7
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHh----hccccc----cccccccCCCCCCcccchhhcc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLIG----TVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~----~rg~~~----~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
..-..|+|+.++.|.++.++.+. |-. .++-++-+..+...- +.|+-+ +-+|..+. ..|..||++.+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~ 239 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA--EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLP 239 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC--eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEc
Confidence 44568999999999999988653 322 344444333333222 224322 22333331 346679999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+++..+.. -+...+|-++-|+|+|||.++|-|
T Consensus 240 ~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 240 NFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp SCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhccCCH--HHHHHHHHHHHHhCCCCcEEEEEe
Confidence 98874421 135789999999999999988854
No 426
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=92.51 E-value=0.013 Score=51.24 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=61.7
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHH----hhcccc---c-cccccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKII----YDRGLI---G-TVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~----~~rg~~---~-~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.+|.|.++..+...+. -+|+-++-. ..+... -..|+- - +..|+.+.++..+.+||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 4799999999999988876543 245555542 333332 223331 1 1234444344456789999998776
Q ss_pred cccccCCCChhhhhhhhc--ccccCCcEEEEeccHH
Q 013393 361 SEIEERGCSFEDLLIEMD--RMLRPEGFVIIRDKSS 394 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~d--rilrp~g~~~~rd~~~ 394 (444)
.. .....++-.+- |+|+|||.+++.....
T Consensus 111 ~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 111 AK-----ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred Cc-----chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 41 12455555555 9999999999965443
No 427
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=92.50 E-value=0.4 Score=42.91 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=69.6
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccCCCchhHHhhccccccccccccCCCC-------CC----cccchhhcc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFST-------YP----RTYDLLHAW 357 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~~~~~rg~~~~~~~~~~~~~~-------y~----~~~dl~h~~ 357 (444)
-..|+|+.++.|+++..|.+... .|+=+|-....+ ..|+-=+-.|..+. ++ .+ .+||+|-++
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~~---~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEMEE---IAGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCCC---CTTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCEEEEEeecCCHHHHHHHHcCC---cEEEEecccccc---CCCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEecC
Confidence 36899999999999999987632 233333210000 01221122232221 11 11 378998876
Q ss_pred ccccccc-------cCCCChhhhhhhhcccccCCcEEEEec--cHHHHHHHHHHHhhccceeEEeccccccCCCCCCCce
Q 013393 358 KVFSEIE-------ERGCSFEDLLIEMDRMLRPEGFVIIRD--KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 428 (444)
Q Consensus 358 ~~~~~~~-------~~~c~~~~~~~e~drilrp~g~~~~rd--~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 428 (444)
.-..... ......+.++-++-|+|||||.+++.- ..+ ...+...++.. ++. +....+... -+.+.|.
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~-v~~~kP~as-R~~s~E~ 174 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSS-YKISKPPAS-RGSSSEI 174 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEE-EEEECC-------CCEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCE-EEEECCCCc-cCCCceE
Confidence 5332000 000113567788899999999998742 222 34445555443 332 233333322 1235799
Q ss_pred EEEEEec
Q 013393 429 VLIAKKK 435 (444)
Q Consensus 429 ~l~~~k~ 435 (444)
.+||++.
T Consensus 175 y~v~~~~ 181 (191)
T 3dou_A 175 YIMFFGF 181 (191)
T ss_dssp EEEEEEE
T ss_pred EEEEeee
Confidence 9999763
No 428
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=92.46 E-value=0.065 Score=55.53 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=61.5
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccCCCchh----HHhhccc---ccccc-ccccCCCCCCcccchhhcccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLK----IIYDRGL---IGTVH-DWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~~~l~----~~~~rg~---~~~~~-~~~~~~~~y~~~~dl~h~~~~ 359 (444)
.-..|+|+.+|.|.++..+...+.. .|+-++....+. .+.+.|+ |-+.+ |+-+ + .+|..||+|-++.+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPM 233 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCC
T ss_pred CCCEEEEecCcccHHHHHHHHcCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCc
Confidence 3458999999999999888765431 344444322222 2344465 33333 3333 2 35678999999877
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
+..+.. -.+...+.++-|+|+|||.+++
T Consensus 234 ~~~~~~--e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFN--ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTC--HHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCc--HHHHHHHHHHHHhcCCCCEEEE
Confidence 553321 2366778899999999999984
No 429
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.43 E-value=0.049 Score=48.96 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=57.6
Q ss_pred ceeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc--cccc-cccccCCCCCCcccchhhcccc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL--IGTV-HDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~--~~~~-~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
.-..|+|+.++.|.+++.|.... -+|+-++- +..+...-++ |+ +-+. .|..+.+. -+.+||+|.++..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAA 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccc
Confidence 34589999999999999887642 34555553 2344433322 33 2222 23333222 2578999999987
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEecc
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
+..+.. ++-|.|+|||.+++--.
T Consensus 153 ~~~~~~----------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 153 PPEIPT----------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CSSCCT----------HHHHTEEEEEEEEEEEC
T ss_pred hhhhhH----------HHHHhcccCcEEEEEEc
Confidence 763321 57799999999998543
No 430
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=92.40 E-value=0.026 Score=55.01 Aligned_cols=95 Identities=17% Similarity=0.123 Sum_probs=52.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-----CCchhHH--hhccc--cccccccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-----SARLKII--YDRGL--IGTVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-----~~~l~~~--~~rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++-|||+..|.+.. .|+-++. +..+..+ -..|. +-+... .+.+..-+.+||+|.++..+
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGE 158 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCC
T ss_pred CEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCcc
Confidence 589999999999998887752 2222221 2111100 00011 111111 12222225789999998766
Q ss_pred cccccC---CCChhhhhhhhcccccCCcEEEEe
Q 013393 361 SEIEER---GCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 361 ~~~~~~---~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+ .... .-....+|-++-|+|+|||.+++.
T Consensus 159 ~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 159 S-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred c-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4 1100 000114788899999999999984
No 431
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=92.39 E-value=0.17 Score=47.01 Aligned_cols=118 Identities=14% Similarity=0.196 Sum_probs=69.0
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHhh----------ccc--ccccc-ccccCCC--CCCccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD----------RGL--IGTVH-DWCESFS--TYPRTY 351 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~~----------rg~--~~~~~-~~~~~~~--~y~~~~ 351 (444)
-..++|+.+|.|.|+..|... |-+ ||+=++-. .-+...-+ .|+ |-+.+ |.-+.++ .-+.++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~--~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDT--LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTS--EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 357999999999999998653 322 45555532 22322211 233 11222 2222233 225789
Q ss_pred chhhcccccccc------ccCCCChhhhhhhhcccccCCcEEEEe-ccHHHHHHHHHHHhhcc-cee
Q 013393 352 DLLHAWKVFSEI------EERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITALK-WDG 410 (444)
Q Consensus 352 dl~h~~~~~~~~------~~~~c~~~~~~~e~drilrp~g~~~~r-d~~~~~~~~~~~~~~~~-w~~ 410 (444)
|.|... |+.- .++|.....+|-|+-|+|+|||.+++. |..+..+.+.+.+..-. |+.
T Consensus 125 D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 125 TKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 988642 3311 133455578999999999999999885 77777777776665543 443
No 432
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=92.31 E-value=0.13 Score=48.87 Aligned_cols=137 Identities=10% Similarity=0.104 Sum_probs=67.1
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC---CchhH-Hhhcccccc--ccccccCCCCCCcccchhhccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS---ARLKI-IYDRGLIGT--VHDWCESFSTYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~---~~l~~-~~~rg~~~~--~~~~~~~~~~y~~~~dl~h~~~~~~~ 362 (444)
..|+|..++-|||+..+... .|.-.-+-|.... +.++. .+..++.-+ -.|- +.++ +.+||+|-++..+..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~V~sd~~~~~ 152 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDI-HTLP--VERTDVIMCDVGESS 152 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCT-TTSC--CCCCSEEEECCCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCH-hHCC--CCCCcEEEEeCcccC
Confidence 57999999999998887664 2332233331000 00000 000011101 1121 2244 689999998755220
Q ss_pred ccc--CCCChhhhhhhhcccccCCc--EEEEe----ccHHHHHHHHHHHhhccceeEEeccccccCCCCCCCceEEEEEe
Q 013393 363 IEE--RGCSFEDLLIEMDRMLRPEG--FVIIR----DKSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAKK 434 (444)
Q Consensus 363 ~~~--~~c~~~~~~~e~drilrp~g--~~~~r----d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k 434 (444)
... +.-....+|-++.|+|+||| .+++. +..++++.++.+.+.+. .+.+. ..-+ -..+.|..+||.+
T Consensus 153 ~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~--k~~s--R~~s~E~y~v~~~ 227 (265)
T 2oxt_A 153 PKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVR--NPYS--RNSTHEMYFTSRA 227 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEEC--CTTS--CTTCCCEEEESSC
T ss_pred CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEE--Eecc--cCCCccEEEEecC
Confidence 000 00001126788999999999 88884 44534444444433221 22211 1111 1234687887754
No 433
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=92.17 E-value=0.042 Score=52.16 Aligned_cols=95 Identities=13% Similarity=0.174 Sum_probs=58.2
Q ss_pred EEEecccccchhhhhccCC---CceEEEeccccC-CCchhHHh----hccccc---cccccccCCCCCCcccchhhcccc
Q 013393 291 NVMDMNSNLGGFAAALKDK---DVWVMNVAPVRM-SARLKIIY----DRGLIG---TVHDWCESFSTYPRTYDLLHAWKV 359 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~---~~wv~~~~~~~~-~~~l~~~~----~rg~~~---~~~~~~~~~~~y~~~~dl~h~~~~ 359 (444)
.|+|+.+|.|.++.+|... |-+ +|+=+|- +.-|...- +.|+-. ..+.=.+.++. ..||++-+..+
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~--~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~~~ 148 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC--KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLNFT 148 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC--EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEESC
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC--EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceeeee
Confidence 7999999999998877532 222 3444553 23343322 234322 22211223443 45999988777
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+..+.. -+...+|-||-|+|||||.+|+.|
T Consensus 149 l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 149 LQFLEP--SERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGGSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeecCc--hhHhHHHHHHHHHcCCCcEEEEEe
Confidence 653321 123568999999999999999965
No 434
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=92.13 E-value=0.04 Score=50.88 Aligned_cols=96 Identities=16% Similarity=0.017 Sum_probs=60.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhccc---cccc-cccccCCCC---CC--cccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGL---IGTV-HDWCESFST---YP--RTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~rg~---~~~~-~~~~~~~~~---y~--~~~dl~h~~~~ 359 (444)
..|+|+.++.|.++..|...-. +|+-++-. .-+...-++-- +-.. .|..+ ++. ++ ..||+|.+..+
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLV-PEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTC-HHHHHHHHHHHCSCEEEEESS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccc-cccccccccccCccEEEEcch
Confidence 4699999999999998865322 56666543 44444433321 1111 12222 111 11 24899999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 360 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+.... .-+...+|-|+-|+|+|||.++|-|
T Consensus 134 ~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIP--VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSC--GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 87442 2357899999999999999988754
No 435
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=92.02 E-value=0.046 Score=52.04 Aligned_cols=96 Identities=7% Similarity=-0.007 Sum_probs=63.0
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhcccc-ccccccccC-C---CCCCcccchhhccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLI-GTVHDWCES-F---STYPRTYDLLHAWKVFSE 362 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~rg~~-~~~~~~~~~-~---~~y~~~~dl~h~~~~~~~ 362 (444)
-..|+|+.+|-|.++..|.+.. -.|+-++. +.-|...-++--- .+--+|.+. + ...+.+||+|-++.++.+
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~ 122 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINR 122 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGG
T ss_pred cCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHh
Confidence 3579999999999999887653 25666664 3445544333210 122333321 1 123578999999988764
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+.. -+...++-+|-|.| |||.+++.
T Consensus 123 ~~~--~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 123 FTT--EEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp SCH--HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CCH--HHHHHHHHHHHHhC-cCcEEEEE
Confidence 321 24677899999999 99999985
No 436
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=92.00 E-value=0.086 Score=51.82 Aligned_cols=142 Identities=18% Similarity=0.208 Sum_probs=84.1
Q ss_pred cCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHh----hcccc----ccccccccCCCCCCcccchhh
Q 013393 285 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLI----GTVHDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 285 ~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~----~rg~~----~~~~~~~~~~~~y~~~~dl~h 355 (444)
....-..|+|+.++.|.++.+|... |-+ .++-++-+..+...- +.|+- =+-+|..++ .|..||++-
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 254 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHV--SATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LPRKADAII 254 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSSCEEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCC--EEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CCCCccEEE
Confidence 3445678999999999999888643 322 233333344444322 23432 223455443 456799999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEeccH--------H------------------HHHHHHHHHhhccce
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------S------------------IINYIRKFITALKWD 409 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~--------~------------------~~~~~~~~~~~~~w~ 409 (444)
+.+++..+... ....+|-++-|.|+|||.++|-|.. . ..++++++++.-.++
T Consensus 255 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 255 LSFVLLNWPDH--DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 99988643221 2357899999999999999986543 1 135667777777777
Q ss_pred eEEeccccccCCCCCCCceEEEEEec
Q 013393 410 GWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
.... ... .++.......++.++|.
T Consensus 333 ~~~~-~~~-~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 333 VEEV-RQL-PSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEE-EEE-ECSSSSCEEEEEEEEEC
T ss_pred EEEE-EeC-CCCcccCccEEEEEEeC
Confidence 6321 111 11000001568888874
No 437
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=91.92 E-value=0.013 Score=53.10 Aligned_cols=116 Identities=9% Similarity=0.173 Sum_probs=73.0
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc-cc--------------cccccccccCCCCCC----c
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR-GL--------------IGTVHDWCESFSTYP----R 349 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r-g~--------------~~~~~~~~~~~~~y~----~ 349 (444)
..|+|..+|-|.++..|.+.. -+|+=+|- +.-|....+| ++ .+-..=.|-.+...| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 479999999999999997653 25776664 3555555444 11 011111222333333 6
Q ss_pred ccchhhccccccccccCCCChhhhhhhhcccccCCcE--EEEeccH----------HHHHHHHHHHhhccceeE
Q 013393 350 TYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGF--VIIRDKS----------SIINYIRKFITALKWDGW 411 (444)
Q Consensus 350 ~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~--~~~rd~~----------~~~~~~~~~~~~~~w~~~ 411 (444)
+||+|-+.++|..+. ......++-||-|+|||||. ++.-+.. -..++++.++.. .|++.
T Consensus 101 ~fD~v~~~~~l~~l~--~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 101 HCAAFYDRAAMIALP--ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp SEEEEEEESCGGGSC--HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred CEEEEEECcchhhCC--HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 899999888776432 12345688999999999998 3332211 135778888887 77764
No 438
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=91.88 E-value=0.029 Score=53.88 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=35.0
Q ss_pred CCcccchhhcccccccc--ccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 347 YPRTYDLLHAWKVFSEI--EERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 347 y~~~~dl~h~~~~~~~~--~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.+.+||+|.+.+++..+ ......+..++-++-|+|||||.+|+..
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 46899999999987421 1112357889999999999999999963
No 439
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=91.81 E-value=0.075 Score=49.04 Aligned_cols=128 Identities=13% Similarity=0.098 Sum_probs=72.7
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHh----hccccc---cc-cccccCCCCCC-----cccchh
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIY----DRGLIG---TV-HDWCESFSTYP-----RTYDLL 354 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~----~rg~~~---~~-~~~~~~~~~y~-----~~~dl~ 354 (444)
.+|+|+.++.|.++.+|... |- --.|+-++. +..+.+.- ..|+-. +. .|..+.++..| .+||+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 48999999999998888653 10 013444443 23333322 224421 11 22222223222 689999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCcEEEEecc------------HHHHHHHHHHHhh----ccceeEEeccccc
Q 013393 355 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK------------SSIINYIRKFITA----LKWDGWLSEVEPR 418 (444)
Q Consensus 355 h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~------------~~~~~~~~~~~~~----~~w~~~~~~~~~~ 418 (444)
.++... -....++-++-|+|||||.+++.|. ......++++... -++++...
T Consensus 153 ~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l----- 220 (232)
T 3cbg_A 153 FIDADK-------RNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVI----- 220 (232)
T ss_dssp EECSCG-------GGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEE-----
T ss_pred EECCCH-------HHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEE-----
Confidence 766532 2356788888999999999999532 1233444444433 35665432
Q ss_pred cCCCCCCCceEEEEEec
Q 013393 419 IDALSSSEERVLIAKKK 435 (444)
Q Consensus 419 ~~~~~~~~~~~l~~~k~ 435 (444)
|. .+.+.+++|+
T Consensus 221 --p~---~dG~~~~~~~ 232 (232)
T 3cbg_A 221 --PL---GDGMTLALKK 232 (232)
T ss_dssp --CS---BTCEEEEEEC
T ss_pred --Ec---CCeEEEEEeC
Confidence 12 3568888874
No 440
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=91.71 E-value=0.28 Score=45.05 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=74.0
Q ss_pred EEEecccccchhhhhccCC--CceEEEeccccCC-CchhH----Hhhcccc----cccc-ccccCCCCC-Ccccchhhcc
Q 013393 291 NVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKI----IYDRGLI----GTVH-DWCESFSTY-PRTYDLLHAW 357 (444)
Q Consensus 291 nvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~~-~~l~~----~~~rg~~----~~~~-~~~~~~~~y-~~~~dl~h~~ 357 (444)
+|+|+.++.|.++..|... |- -.|+-++.. ..+.+ +-..|+- -+.+ |-.+.++.. +.+||+|-.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADN--TTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTT--SEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 8999999999988877541 11 134444432 23322 2222332 1111 222333334 5789999766
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEeccH------------HHHHHHHHHHhhccceeEE--eccccccCCCC
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------SIINYIRKFITALKWDGWL--SEVEPRIDALS 423 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------------~~~~~~~~~~~~~~w~~~~--~~~~~~~~~~~ 423 (444)
.-.. ....++-++-|+|||||.+++.|.. .....++++...++++-++ ..+ |.
T Consensus 137 ~~~~-------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-----p~- 203 (221)
T 3dr5_A 137 VSPM-------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARL-----PL- 203 (221)
T ss_dssp CCTT-------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEE-----SS-
T ss_pred CcHH-------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEe-----ec-
Confidence 4222 3566788889999999999994321 2233455666666554221 122 33
Q ss_pred CCCceEEEEEecc
Q 013393 424 SSEERVLIAKKKL 436 (444)
Q Consensus 424 ~~~~~~l~~~k~~ 436 (444)
.+.+++++|.+
T Consensus 204 --gdGl~~~~~~~ 214 (221)
T 3dr5_A 204 --GAGLTVVTKAL 214 (221)
T ss_dssp --TTCEEEEEECC
T ss_pred --cchHHHHHHHH
Confidence 47799999975
No 441
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=91.61 E-value=0.23 Score=46.07 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=65.5
Q ss_pred eEEEecccccchhhhhccCC-----CceEEEeccccC-CCchhHHhhccc---cc-cccccccC--CCCCCc-ccchhhc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-----DVWVMNVAPVRM-SARLKIIYDRGL---IG-TVHDWCES--FSTYPR-TYDLLHA 356 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-----~~wv~~~~~~~~-~~~l~~~~~rg~---~~-~~~~~~~~--~~~y~~-~~dl~h~ 356 (444)
..|+|+.++.|+.++.|.+. |- -.|+-++- +.-+... |++ |= +..|..+. ++..+. +||+|+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~--~~V~gvD~s~~~l~~a--~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGID--CQVIGIDRDLSRCQIP--ASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCC--CEEEEEESCCTTCCCC--GGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCC--CEEEEEeCChHHHHHH--hccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999999999988642 21 13443432 2212111 122 11 12233332 222222 6999997
Q ss_pred cccccccccCCCChhhhhhhhcc-cccCCcEEEEeccHH-----HHHHHHHHHhhc--ccee
Q 013393 357 WKVFSEIEERGCSFEDLLIEMDR-MLRPEGFVIIRDKSS-----IINYIRKFITAL--KWDG 410 (444)
Q Consensus 357 ~~~~~~~~~~~c~~~~~~~e~dr-ilrp~g~~~~rd~~~-----~~~~~~~~~~~~--~w~~ 410 (444)
+.. + -....++-|+-| .|+|||.+++.|... --..+.++++.. +++.
T Consensus 159 d~~------~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA------H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS------C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred CCc------h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 653 1 257789999998 999999999976311 113567777766 5665
No 442
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=91.54 E-value=0.09 Score=49.51 Aligned_cols=116 Identities=14% Similarity=0.116 Sum_probs=73.4
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhhc-cc-------------------cccccccccCCCCCC
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-GL-------------------IGTVHDWCESFSTYP 348 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~r-g~-------------------~~~~~~~~~~~~~y~ 348 (444)
..|+|..+|-|.++..|.+... +|+=+|-. .-+.....+ ++ -+-..=.|-.+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4799999999999999987632 57777743 444443332 11 011111222233332
Q ss_pred ----cccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEec---------c---HHHHHHHHHHHhhccceeE
Q 013393 349 ----RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD---------K---SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 349 ----~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd---------~---~~~~~~~~~~~~~~~w~~~ 411 (444)
.+||+|-+.++|..+. ......++-||-|+|||||.+++-. . .-..++++.++.. .|++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~--~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN--PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC--GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred cccCCCEEEEEEhhhhhhCC--HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 7899999888887442 2346678999999999999986421 0 1124677888776 47764
No 443
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=91.54 E-value=0.057 Score=52.44 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=73.1
Q ss_pred eEEEecccccchhhhhccC-CCceEEEeccccC-CCchhHHh----hccccccccccccCCCCC-Ccccchhhccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRM-SARLKIIY----DRGLIGTVHDWCESFSTY-PRTYDLLHAWKVFSE 362 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~-~~~l~~~~----~rg~~~~~~~~~~~~~~y-~~~~dl~h~~~~~~~ 362 (444)
..|+|+.+|-||++|.+.. .+- -.|+=++- +.-+...- +.|+ .-..-.|.....+ +.+||++....+-
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~-- 198 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA-- 198 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC--
T ss_pred CEEEEECCCccHHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc--
Confidence 5899999999998866532 121 24555553 34444322 3365 2111112211222 4899999865541
Q ss_pred cccCCCChhhhhhhhcccccCCcEEEEeccHHHHHH----H-HHHHhhccceeEEeccccccCCCCCCCceEEEEEec
Q 013393 363 IEERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINY----I-RKFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 363 ~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~----~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 435 (444)
-+...++-|+-|.|||||.+++++....-.- + ..... .|+...... + ..+..+.+.+++|.
T Consensus 199 -----~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~-p----~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 199 -----EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVL-P----SGKVNNTSVLVFKC 264 (298)
T ss_dssp -----SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEEC-C----CTTCCCEEEEEEEC
T ss_pred -----cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEEC-C----CCCcCcEEEEEEcc
Confidence 2467899999999999999999985332110 0 11222 566543222 1 12224678888874
No 444
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=91.34 E-value=0.044 Score=50.38 Aligned_cols=93 Identities=14% Similarity=0.231 Sum_probs=60.7
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc----cc---ccc-ccccccCCCCC--Ccccchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR----GL---IGT-VHDWCESFSTY--PRTYDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r----g~---~~~-~~~~~~~~~~y--~~~~dl~h~~ 357 (444)
..|+|+.++.|.++..|... |- -+|+-++. +..+...-++ |+ |-+ ..|..+..+.. +.+||+|-++
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPE--ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 48999999999999888642 21 24555554 3444443333 43 222 22444432333 5789999876
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
..++ ....++-++-|.|+|||.+++.|
T Consensus 134 ~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 6543 46788899999999999999964
No 445
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.29 E-value=0.3 Score=47.63 Aligned_cols=93 Identities=15% Similarity=0.263 Sum_probs=56.7
Q ss_pred cEEEEecCcc-CC-CCCCCccEEEecccc--c-----------cccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCCh--
Q 013393 92 STLGVLGTKR-LP-YPSRSFELAHCSRCR--I-----------DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP-- 154 (444)
Q Consensus 92 ~~~~~~d~~~-lp-~~~~sFDlI~~~~~~--l-----------~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~-- 154 (444)
..+..+|... +. +++++||+|++.--. . .|.......+.++.++|+|||.+++.....+....
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 4455666432 33 457889999986310 0 12223467899999999999999997554321100
Q ss_pred hhHHHHHHHHHHHHhcCeEEEeeecceeEeeccC
Q 013393 155 ENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 188 (444)
Q Consensus 155 ~~~~~~~~l~~l~~~~gf~~v~~~~~~~~w~k~l 188 (444)
.....+..+.++++..||.... ..+|+|+.
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~~----~iiW~k~~ 124 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLAE----DFYWFNPS 124 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEEE----EEEEECSS
T ss_pred cccchHHHHHHHHHhCCCEEEE----EEEEecCC
Confidence 0012345566678889996553 45898764
No 446
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=91.17 E-value=0.14 Score=47.28 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=72.5
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh----ccccc---cc-cc----------------cccC
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RGLIG---TV-HD----------------WCES 343 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~----rg~~~---~~-~~----------------~~~~ 343 (444)
..|+|+.++.|.++..|... |- .-+|+-++. +..+...-+ .|+-. +. .| |-+.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPE-DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 48999999999999888642 10 013444443 233332222 23311 11 11 2222
Q ss_pred CCCCC-cccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc------------HHHHHHHHHHH----hhc
Q 013393 344 FSTYP-RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK------------SSIINYIRKFI----TAL 406 (444)
Q Consensus 344 ~~~y~-~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~------------~~~~~~~~~~~----~~~ 406 (444)
|++ + .+||+|.++.... ....++-++-|+|||||.+++.+. ......++... ..=
T Consensus 141 f~~-~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (239)
T 2hnk_A 141 FAF-GPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDS 212 (239)
T ss_dssp TCC-STTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCT
T ss_pred ccC-CCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCC
Confidence 322 2 6899998764322 255778899999999999999751 12333344433 344
Q ss_pred cceeEEeccccccCCCCCCCceEEEEEecc
Q 013393 407 KWDGWLSEVEPRIDALSSSEERVLIAKKKL 436 (444)
Q Consensus 407 ~w~~~~~~~~~~~~~~~~~~~~~l~~~k~~ 436 (444)
++++... |. .+.+.+++|++
T Consensus 213 ~~~~~~~-------p~---~~g~~~~~~~~ 232 (239)
T 2hnk_A 213 LVDVSLV-------PI---ADGVSLVRKRL 232 (239)
T ss_dssp TEEEEEE-------CS---TTCEEEEEECC
T ss_pred CeEEEEE-------Ec---CCceEeeeehh
Confidence 4555432 23 36699999876
No 447
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=91.16 E-value=1.6 Score=43.55 Aligned_cols=123 Identities=15% Similarity=0.039 Sum_probs=71.5
Q ss_pred eEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCC--------CCCCccEEEecccc
Q 013393 47 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAHCSRCR 118 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~--------~~~sFDlI~~~~~~ 118 (444)
++||+-||.|.++.-+.+++... +...|+.+...+..+.+.....+...|+.++.. ....+|+|+...--
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~~--v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFDV--KMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPC 81 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCEE--EEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCC
T ss_pred eEEEEccCcCHHHHHHHHCCCcE--EEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCC
Confidence 79999999999988887754221 123344445555555555566677777766531 23579999974310
Q ss_pred ccc-------cccHH-HHHH---HHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEE
Q 013393 119 IDW-------LQRDG-ILLL---ELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 174 (444)
Q Consensus 119 l~~-------~~d~~-~~L~---ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~ 174 (444)
-.+ ..|.. .++. ++.+.++|.-+++=..+... .......++.+. .++++||.+
T Consensus 82 Q~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~--s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 82 QGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIM--QEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTT--CGGGHHHHHHHH-HHHHTTEEE
T ss_pred CCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhh--ccCcHHHHHHHH-HHHcCCCcc
Confidence 111 11222 3333 45556788644442333322 233345677888 889999987
No 448
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=91.04 E-value=0.12 Score=47.02 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=73.5
Q ss_pred eeEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHHh----hccc---ccccc-ccccCCCCCC-----cccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIY----DRGL---IGTVH-DWCESFSTYP-----RTYD 352 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~~----~rg~---~~~~~-~~~~~~~~y~-----~~~d 352 (444)
-.+|+|+.++.|.++.+|... | - -+|+-++. +..+...- ..|+ |-+.+ |..+.++..+ .+||
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPAD--GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 358999999999999888653 1 1 23444443 33333322 2244 11111 2222222222 6899
Q ss_pred hhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc------------HHHHHHHHHHHhh----ccceeEEeccc
Q 013393 353 LLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK------------SSIINYIRKFITA----LKWDGWLSEVE 416 (444)
Q Consensus 353 l~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~------------~~~~~~~~~~~~~----~~w~~~~~~~~ 416 (444)
+|.++.- ......++-++-|.|||||.+++.|. ......++++.+. =++++...
T Consensus 148 ~v~~d~~-------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--- 217 (229)
T 2avd_A 148 VAVVDAD-------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLL--- 217 (229)
T ss_dssp EEEECSC-------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEE---
T ss_pred EEEECCC-------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEE---
Confidence 9887653 23456788889999999999999542 2233444444433 34555322
Q ss_pred cccCCCCCCCceEEEEEec
Q 013393 417 PRIDALSSSEERVLIAKKK 435 (444)
Q Consensus 417 ~~~~~~~~~~~~~l~~~k~ 435 (444)
|. .+.+++++|.
T Consensus 218 ----p~---~dGl~~~~k~ 229 (229)
T 2avd_A 218 ----PL---GDGLTLAFKI 229 (229)
T ss_dssp ----CS---TTCEEEEEEC
T ss_pred ----ec---CCceEEEEEC
Confidence 22 3679998874
No 449
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=90.86 E-value=0.047 Score=48.41 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=61.6
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHH----hhccc--ccccc-ccccCCCCC-Ccccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKII----YDRGL--IGTVH-DWCESFSTY-PRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~----~~rg~--~~~~~-~~~~~~~~y-~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|.++.++...+.- .|+-++. +..+... -..|+ +-+.+ |..+....+ +.+||+|-++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 47999999999998866544421 3555553 2333332 22343 22222 222221112 5799999988776
Q ss_pred cccccCCCChhhhhhhhcc--cccCCcEEEEeccH
Q 013393 361 SEIEERGCSFEDLLIEMDR--MLRPEGFVIIRDKS 393 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~dr--ilrp~g~~~~rd~~ 393 (444)
.... -....++-++-| +|+|||.+++....
T Consensus 124 ~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 124 NVDS---ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Ccch---hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 6221 247888999988 99999999997543
No 450
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=90.78 E-value=0.5 Score=44.29 Aligned_cols=120 Identities=10% Similarity=0.087 Sum_probs=71.4
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHh----h---ccc---cccccccccCC-C------CCC
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----D---RGL---IGTVHDWCESF-S------TYP 348 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~----~---rg~---~~~~~~~~~~~-~------~y~ 348 (444)
.-..|+|+.++-|.++..|... |- .+|+=++-. ..+...- . .|+ +-+++.=.+.+ + .-+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3458999999999998777543 22 245544432 2222211 1 233 22333222222 1 115
Q ss_pred cccchhhcccccccc--------------ccCCCChhhhhhhhcccccCCcEEEEeccHHHHHHHHHHHhhcccee
Q 013393 349 RTYDLLHAWKVFSEI--------------EERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDG 410 (444)
Q Consensus 349 ~~~dl~h~~~~~~~~--------------~~~~c~~~~~~~e~drilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~ 410 (444)
.+||+|-++--|... ....+.+..++-++-|+|+|||.+++--..+-+.++.+.++.- |..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 789999998444311 1224678999999999999999998766666667777777763 654
No 451
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=90.68 E-value=0.13 Score=50.88 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=60.6
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhh-ccccccccccccCCCCCCcccchhhccccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD-RGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~-rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
.....|+|+.++.|.++.+|.+. |-. .++-.|-+..+...-+ .++--+-+|..++ .|. ||++.+.+++-.+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~~~-~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLI--KGINFDLPQVIENAPPLSGIEHVGGDMFAS---VPQ-GDAMILKAVCHNWS 281 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTC---CCC-EEEEEEESSGGGSC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCC--eEEEeChHHHHHhhhhcCCCEEEeCCcccC---CCC-CCEEEEecccccCC
Confidence 45678999999999999998643 311 2222222211111111 1222233455443 455 99999999887443
Q ss_pred cCCCChhhhhhhhcccccCCcEEEEec
Q 013393 365 ERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.. ....+|-++-|.|+|||.++|-|
T Consensus 282 d~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 DE--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 21 23489999999999999999864
No 452
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=90.67 E-value=0.22 Score=45.56 Aligned_cols=113 Identities=15% Similarity=0.129 Sum_probs=63.8
Q ss_pred eEEEecccccchhhhhccCC--CceEEEeccccCC-C----chhHHhhc-cccccccccccC--CCCCCcccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-A----RLKIIYDR-GLIGTVHDWCES--FSTYPRTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~~-~----~l~~~~~r-g~~~~~~~~~~~--~~~y~~~~dl~h~~~~ 359 (444)
..|+|+.++.|+++..|.+. |-. .|+-++-. . .+...-.+ ++--+..|..+. ++..+.+||+|.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~--~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDG--LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC--EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 47999999999999988653 211 23333322 1 12222221 222222333331 2323568999987543
Q ss_pred ccccccCCCC-hhhhhhhhcccccCCcEEEEeccHH----------HHHHHHHHHhhccceeE
Q 013393 360 FSEIEERGCS-FEDLLIEMDRMLRPEGFVIIRDKSS----------IINYIRKFITALKWDGW 411 (444)
Q Consensus 360 ~~~~~~~~c~-~~~~~~e~drilrp~g~~~~rd~~~----------~~~~~~~~~~~~~w~~~ 411 (444)
. .+ ...++.++-|.|+|||.+++.-... ++.+-.+++..-.|+..
T Consensus 157 -~------~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 212 (233)
T 2ipx_A 157 -Q------PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQ 212 (233)
T ss_dssp -C------TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEE
T ss_pred -C------ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceE
Confidence 1 12 2445677999999999999943332 12222466676677764
No 453
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.61 E-value=0.29 Score=46.64 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=77.0
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc-----cc-----------ccccc-ccccCCCCCCcc
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR-----GL-----------IGTVH-DWCESFSTYPRT 350 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r-----g~-----------~~~~~-~~~~~~~~y~~~ 350 (444)
-.+|+|+.+|-|+++..+...+. .+|+=++- +.-+.+.-++ |+ +-+.+ |-.+-... +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 46899999999999999887643 34444443 2222222111 22 11111 21111222 688
Q ss_pred cchhhcccccccccc-CCCChhhhhhhhcccccCCcEEEEec-----cHHHHHHHHHHHhhccceeEEeccccccCCCCC
Q 013393 351 YDLLHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSS 424 (444)
Q Consensus 351 ~dl~h~~~~~~~~~~-~~c~~~~~~~e~drilrp~g~~~~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 424 (444)
||+|-++.... ... ..--...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+...... -|.-.
T Consensus 153 fD~Ii~d~~~~-~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~---vP~~~ 228 (281)
T 1mjf_A 153 FDVIIADSTDP-VGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFP---VIGYA 228 (281)
T ss_dssp EEEEEEECCCC-C-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEEC---CTTSS
T ss_pred eeEEEECCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEe---cCCCC
Confidence 99999865422 111 00012567889999999999999962 3455555555555443344322111 11112
Q ss_pred CCceEEEEEec
Q 013393 425 SEERVLIAKKK 435 (444)
Q Consensus 425 ~~~~~l~~~k~ 435 (444)
+.-.+++|.|+
T Consensus 229 g~~~~~~as~~ 239 (281)
T 1mjf_A 229 SPWAFLVGVKG 239 (281)
T ss_dssp SSEEEEEEEES
T ss_pred ceEEEEEeeCC
Confidence 34678899886
No 454
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=90.46 E-value=1.1 Score=43.92 Aligned_cols=126 Identities=13% Similarity=0.048 Sum_probs=69.5
Q ss_pred eEEEECCCcchHHHHHhhCCceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCC---CCCCccEEEeccccccc--
Q 013393 47 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRIDW-- 121 (444)
Q Consensus 47 rVLDVGCGtG~~a~~La~~~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~---~~~sFDlI~~~~~~l~~-- 121 (444)
+|||+-||.|.++..+.++++..--+...|+.+.+++..+.+.....+...|+..+.. +...+|+|+...---.+
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS~ 83 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 83 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC------
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchhh
Confidence 7999999999999888775421111223344555666666665555566777766541 11258999975310111
Q ss_pred ------cccHH-HHHH---HHHhhcC--CCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEee
Q 013393 122 ------LQRDG-ILLL---ELDRLLR--PGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 177 (444)
Q Consensus 122 ------~~d~~-~~L~---ei~rvLk--PGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~ 177 (444)
..|.. .++. ++.+.++ |--+++=..+... ....+..+.+.+++.||.+...
T Consensus 84 ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~-----~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 84 IGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFE-----VSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp ------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG-----GSHHHHHHHHHHHHTTEEEEEE
T ss_pred cCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCcccc-----CHHHHHHHHHHHHHCCCeeEEE
Confidence 11211 2444 4444556 6643331222211 1245778888889999976543
No 455
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.38 E-value=0.18 Score=49.58 Aligned_cols=101 Identities=15% Similarity=0.296 Sum_probs=64.1
Q ss_pred ccCCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhh----ccccc----cccccccCCCCCCcccchh
Q 013393 284 AQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLL 354 (444)
Q Consensus 284 l~~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~----rg~~~----~~~~~~~~~~~y~~~~dl~ 354 (444)
+.......|+|+.++.|.++.+|.+. |-. +|+-+|-+..+...-+ .|+-+ +-+|..+. .+|. +|++
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v 260 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPEL--DSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAV 260 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTC--EEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEE
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCC--eEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEE
Confidence 34456679999999999999998643 311 2333333444443332 25422 22344332 2333 4999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 355 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 355 h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.+..++..+.. -....+|-++-|+|+|||.++|-|
T Consensus 261 ~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99998874422 136788999999999999998865
No 456
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=90.12 E-value=0.2 Score=46.18 Aligned_cols=98 Identities=16% Similarity=0.080 Sum_probs=54.2
Q ss_pred eEEEecccccchhhhhccC-CCceEEEeccccCC-Cch-hH-------Hhhccccc--cccccccCCCC-CCcccchhhc
Q 013393 290 RNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMS-ARL-KI-------IYDRGLIG--TVHDWCESFST-YPRTYDLLHA 356 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~~-~~l-~~-------~~~rg~~~--~~~~~~~~~~~-y~~~~dl~h~ 356 (444)
..|+|+.+|.|.++..|.. .|- .+|+=+|.. ..+ .+ +..+|+-. ..+.-.+.++. +.-.+|.++.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~--~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQN--TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTT--EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 5799999999999999872 343 245555543 444 22 12345522 22222333321 1134444443
Q ss_pred ccccccc-ccCCCChhhhhhhhcccccCCcEEEE
Q 013393 357 WKVFSEI-EERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 357 ~~~~~~~-~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
..-+... ...+-+...++-|+-|+|||||.++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 3211110 01112345689999999999999999
No 457
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.06 E-value=0.16 Score=44.76 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=28.8
Q ss_pred cccchhhccccccccccC-------CCChhhhhhhhcccccCCcEEEEec
Q 013393 349 RTYDLLHAWKVFSEIEER-------GCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 349 ~~~dl~h~~~~~~~~~~~-------~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
++||+|-++..+.....+ ......++-|+-|+|||||.+++.+
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 589999887644310000 0011477889999999999999973
No 458
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=89.85 E-value=0.14 Score=49.63 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=60.9
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----ccc------c-cc-cccc------cCCC--CC
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GLI------G-TV-HDWC------ESFS--TY 347 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~~------~-~~-~~~~------~~~~--~y 347 (444)
-..|+|+.+|-|+.+..+.....+ +|+=+|- +.-|...-+| |+- . .| ...+ +.++ .-
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 357999999999977765544432 5666664 3555544433 220 0 01 1112 2221 12
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEecc
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 392 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~ 392 (444)
+.+||+|-+...+-..... -....+|-|+-|+|||||.+++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~-~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHP-RHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCST-TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCH-HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4899999876654311111 1357899999999999999998643
No 459
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=89.80 E-value=0.25 Score=47.73 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=77.1
Q ss_pred ceeEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHhhc------cc----cccc-cccccCCCC-CCcccch
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------GL----IGTV-HDWCESFST-YPRTYDL 353 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~~r------g~----~~~~-~~~~~~~~~-y~~~~dl 353 (444)
.-.+|+|+.+|-|+++..+.+. ++ .+|+=++-. .-+.+.-++ ++ +-+. .|..+-... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3468999999999999998765 32 234333321 222221111 11 1111 222221111 2678999
Q ss_pred hhcccccccccc-CCCChhhhhhhhcccccCCcEEEEecc-----HHHHHHHHHHHhhccce-eEEeccccccCCCCCCC
Q 013393 354 LHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKWD-GWLSEVEPRIDALSSSE 426 (444)
Q Consensus 354 ~h~~~~~~~~~~-~~c~~~~~~~e~drilrp~g~~~~rd~-----~~~~~~~~~~~~~~~w~-~~~~~~~~~~~~~~~~~ 426 (444)
|-++.... ... ...--...+-++-|+|+|||.+++... .....++.+.++...+. +...... -.....+.
T Consensus 173 Ii~d~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~--vP~yp~g~ 249 (304)
T 3bwc_A 173 VIIDTTDP-AGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMH--VPTYPCGS 249 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECC--CTTSTTSC
T ss_pred EEECCCCc-cccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEee--cccccCcc
Confidence 99865432 111 001115778899999999999999532 24566777777766554 3222111 11111234
Q ss_pred ceEEEEEec
Q 013393 427 ERVLIAKKK 435 (444)
Q Consensus 427 ~~~l~~~k~ 435 (444)
-.+++|.|+
T Consensus 250 w~f~~as~~ 258 (304)
T 3bwc_A 250 IGTLVCSKK 258 (304)
T ss_dssp CEEEEEESS
T ss_pred eEEEEEeCC
Confidence 568889886
No 460
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=89.75 E-value=0.23 Score=46.36 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=55.5
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhccc-cccccccccCCCCCCcccchhhcccccccccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDRGL-IGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 365 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~rg~-~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~~ 365 (444)
-..|+|+.+|-|.++..|... |-. +|+-++- +.-+...-+++- +-....=-+.++.-+.+||+|.+...
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~------ 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI--TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA------ 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC------
Confidence 347999999999999888654 221 3444443 344444444431 11111111233433478999987543
Q ss_pred CCCChhhhhhhhcccccCCcEEEEec
Q 013393 366 RGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 366 ~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
...+-|+-|+|||||.+++-+
T Consensus 158 -----~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 -----PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -----CCCHHHHHHHEEEEEEEEEEE
T ss_pred -----hhhHHHHHHhcCCCcEEEEEE
Confidence 124789999999999998864
No 461
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=89.71 E-value=0.043 Score=47.22 Aligned_cols=95 Identities=9% Similarity=0.142 Sum_probs=56.5
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHh----hccc-cccc-cccccCCCCCC---cccchhhcccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL-IGTV-HDWCESFSTYP---RTYDLLHAWKV 359 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~----~rg~-~~~~-~~~~~~~~~y~---~~~dl~h~~~~ 359 (444)
..|+|+.++.|.++..+..... +|+-++.. ..+...- ..|+ +-++ .|..+..+..+ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 4799999999999988865421 25555542 3333222 2233 1122 22333222222 27999999887
Q ss_pred ccccccCCCChhhhhhhhc--ccccCCcEEEEeccH
Q 013393 360 FSEIEERGCSFEDLLIEMD--RMLRPEGFVIIRDKS 393 (444)
Q Consensus 360 ~~~~~~~~c~~~~~~~e~d--rilrp~g~~~~rd~~ 393 (444)
|. . ....++-++- |+|+|||.+++....
T Consensus 120 ~~---~---~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 120 YA---M---DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp TT---S---CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred Cc---h---hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 75 1 2445555565 999999999986543
No 462
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=89.68 E-value=1.4 Score=48.45 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=66.0
Q ss_pred eeEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhh----------ccc--cccccccccCCCCCCcccchhh
Q 013393 289 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----------RGL--IGTVHDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~----------rg~--~~~~~~~~~~~~~y~~~~dl~h 355 (444)
-..|+|+..|.|.++.+|....--.-+|+=+|-. .-|...-+ .|+ |-+++.=-+.++..+.+||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 4579999999999999998753111245555532 33443322 244 3344444455666679999999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 356 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 356 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
+..++.++... ....++-|+-|+|||| .+||-
T Consensus 802 ~~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 802 CLEVIEHMEED--QACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEE
T ss_pred EeCchhhCChH--HHHHHHHHHHHHcCCC-EEEEE
Confidence 99999865421 2445788999999999 77774
No 463
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=89.60 E-value=0.25 Score=45.81 Aligned_cols=114 Identities=14% Similarity=0.183 Sum_probs=65.1
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHhhc------------ccccc---ccccccCCC--CCCcc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------------GLIGT---VHDWCESFS--TYPRT 350 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~~r------------g~~~~---~~~~~~~~~--~y~~~ 350 (444)
..|+|+.+|.|+|+..|... |- .+|+-++.. .-+..+-++ |+-.+ -.|..+.++ .-+.+
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE--DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT--SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC--CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 57999999999999887642 21 256666633 333332221 44221 122222222 11356
Q ss_pred cchhhccccccccc------cCCCChhhhhhhhcccccCCcEEEE-eccHHHHHHHHHHHhhcc
Q 013393 351 YDLLHAWKVFSEIE------ERGCSFEDLLIEMDRMLRPEGFVII-RDKSSIINYIRKFITALK 407 (444)
Q Consensus 351 ~dl~h~~~~~~~~~------~~~c~~~~~~~e~drilrp~g~~~~-rd~~~~~~~~~~~~~~~~ 407 (444)
+|.+... |+... +++--...++-++-|+|+|||.+++ -|..+..+.+.+.+..-.
T Consensus 129 ~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 129 LSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp EEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred cCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 6766421 22111 1222236899999999999999988 477766676766655443
No 464
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=89.53 E-value=0.33 Score=43.70 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=68.8
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHHh--------hccc--cccccccccCCCCCCcccchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY--------DRGL--IGTVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~~--------~rg~--~~~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
..|+|+.+|.|.++..|... |- -+|+-++-. .-|..+. .+|+ +-..+.-.+.++.-+.+ |.+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~-- 103 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH-- 103 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE--
T ss_pred CEEEEecCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE--
Confidence 47999999999999988753 22 245555543 4344321 3443 22233333445544445 7666
Q ss_pred cccc--ccc-cCCCChhhhhhhhcccccCCcEEEEec------------------c-HHHHHHHHHHHhhccceeE
Q 013393 358 KVFS--EIE-ERGCSFEDLLIEMDRMLRPEGFVIIRD------------------K-SSIINYIRKFITALKWDGW 411 (444)
Q Consensus 358 ~~~~--~~~-~~~c~~~~~~~e~drilrp~g~~~~rd------------------~-~~~~~~~~~~~~~~~w~~~ 411 (444)
-+|+ ... .+.-+...++-|+-|+|||||.+++.. . ..+.+.++..+..-.|++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 2232 000 000112788999999999999999942 1 2233447788888888764
No 465
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=89.38 E-value=0.97 Score=43.45 Aligned_cols=145 Identities=10% Similarity=0.053 Sum_probs=75.9
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc-----------ccccc-ccccccCCCCCCcccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR-----------GLIGT-VHDWCESFSTYPRTYD 352 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r-----------g~~~~-~~~~~~~~~~y~~~~d 352 (444)
++-++|+|+..|-|+.+..|... ++- .|+=++- +.-+.+.-++ .=+-+ .-|..+.....+.+||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 45679999999999999888765 333 3443442 2222222111 01112 2233444444568999
Q ss_pred hhhcccccccccc-CCCChhhhhhhhcccccCCcEEEEec-----cHHHHHHHHHHHhhccceeEEeccccccCCCCCCC
Q 013393 353 LLHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSE 426 (444)
Q Consensus 353 l~h~~~~~~~~~~-~~c~~~~~~~e~drilrp~g~~~~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 426 (444)
+|-++..-. ... ...--...+-++-|+|+|||.+++.- ..+.+.++.+.+++.--.+......-- ....+.
T Consensus 160 vIi~D~~~p-~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp--~~p~g~ 236 (294)
T 3adn_A 160 VIISDCTDP-IGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIP--TYYGGI 236 (294)
T ss_dssp EEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECT--TSSSSE
T ss_pred EEEECCCCc-cCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEec--ccCCCc
Confidence 998854322 111 11112678889999999999999963 223444444444443333332211101 111233
Q ss_pred ceEEEEEecc
Q 013393 427 ERVLIAKKKL 436 (444)
Q Consensus 427 ~~~l~~~k~~ 436 (444)
-.+++|.|+.
T Consensus 237 ~~f~~as~~~ 246 (294)
T 3adn_A 237 MTFAWATDND 246 (294)
T ss_dssp EEEEEEESCT
T ss_pred eEEEEEeCCc
Confidence 4688888875
No 466
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=89.36 E-value=0.13 Score=46.24 Aligned_cols=99 Identities=8% Similarity=0.137 Sum_probs=60.4
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhh----ccc----ccccc-ccccCCCCC-Ccc-cchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL----IGTVH-DWCESFSTY-PRT-YDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~----rg~----~~~~~-~~~~~~~~y-~~~-~dl~h~~ 357 (444)
..|+|+.+|.|+++..+..... -.|+=++.. ..+...-+ .|+ +-+++ |..+..+.. +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3799999999999886443321 245555543 44443222 233 22222 222222222 468 9999888
Q ss_pred ccccccccCCCChhhhhhhh--cccccCCcEEEEeccHHH
Q 013393 358 KVFSEIEERGCSFEDLLIEM--DRMLRPEGFVIIRDKSSI 395 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~--drilrp~g~~~~rd~~~~ 395 (444)
..|. . -....++-++ -|+|+|||.+++......
T Consensus 133 ~~~~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PPFH-F----NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSS-S----CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCC-C----ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 7764 1 2356777777 789999999999766553
No 467
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=89.33 E-value=0.022 Score=52.56 Aligned_cols=93 Identities=17% Similarity=0.259 Sum_probs=60.2
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHH----hhccc---ccccc-ccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKII----YDRGL---IGTVH-DWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~----~~rg~---~~~~~-~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++-|+++..|.... .+|+=++- +..+... -..|+ +-+.+ |..+ ++ -+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCCc
Confidence 479999999999999997653 35555553 2333322 22233 22222 3322 22 35799999999888
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
.... .....+.|+-|+|+|||.+++..
T Consensus 155 ~~~~----~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPD----YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGG----GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcc----hhhhHHHHHHhhcCCcceeHHHH
Confidence 7322 13336779999999999988765
No 468
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=89.19 E-value=0.11 Score=47.22 Aligned_cols=93 Identities=22% Similarity=0.269 Sum_probs=53.0
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC-Cc----hhHHhhc-cccccccccccC--CCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-AR----LKIIYDR-GLIGTVHDWCES--FSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~----l~~~~~r-g~~~~~~~~~~~--~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.+|.|.++..|.+. +- -.|+-++-. .- +...-.+ ++.-+..|-.+. +...+.+||++-++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~--~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~-- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDE--GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI-- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTT--SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC--
T ss_pred CEEEEECCcCCHHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec--
Confidence 37999999999998876542 10 134444432 11 1111112 122223344332 123458999998762
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEe
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIR 390 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~r 390 (444)
. .+ -....++-|+-|+|||||.+++-
T Consensus 135 ~---~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 A---QK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp C---ST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---Ch-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 2 11 12334588999999999999884
No 469
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=89.04 E-value=0.47 Score=43.40 Aligned_cols=104 Identities=12% Similarity=0.027 Sum_probs=66.8
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHhhc----cc---cc-cccccccCCCCCCcccchhhccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL---IG-TVHDWCESFSTYPRTYDLLHAWKVF 360 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~~r----g~---~~-~~~~~~~~~~~y~~~~dl~h~~~~~ 360 (444)
..|+|+.++.|.++.++... ..+|+-++- +..+...-++ |+ +- +..|..+.+. -+.+||++-++-
T Consensus 93 ~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-PEGIFHAAFVDV-- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-CTTCBSEEEECS--
T ss_pred CEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-CCCcccEEEECC--
Confidence 47999999999999888754 235666664 3445444333 43 11 2234444330 136799876521
Q ss_pred cccccCCCChhhhhhhhcccccCCcEEEEecc-HHHHHHHHHHHhhc
Q 013393 361 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITAL 406 (444)
Q Consensus 361 ~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~-~~~~~~~~~~~~~~ 406 (444)
-+...++-++-|+|+|||.+++-.. .+-+.++...++..
T Consensus 167 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 167 -------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 1356788899999999999988666 45666666666554
No 470
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=88.85 E-value=0.32 Score=46.11 Aligned_cols=111 Identities=12% Similarity=0.050 Sum_probs=63.5
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHH----hhccc--cccccccccCCCCCCcccchhhcccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKII----YDRGL--IGTVHDWCESFSTYPRTYDLLHAWKVFS 361 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~----~~rg~--~~~~~~~~~~~~~y~~~~dl~h~~~~~~ 361 (444)
..|+|+.++.|+|+..+... + --.|+-++. +.-+... -..|+ +-+++.=++.++. +.+||++-++...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-
T ss_pred CEEEEecCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-
Confidence 47999999999998877643 2 012333332 2222221 12232 1122222233322 6789998665432
Q ss_pred ccccCCCChhhhhhhhcccccCCcEEEEeccH------HHHHH-HHHHHhhccceeE
Q 013393 362 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------SIINY-IRKFITALKWDGW 411 (444)
Q Consensus 362 ~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~------~~~~~-~~~~~~~~~w~~~ 411 (444)
....++.++-|.|+|||.+++-+.. +...+ ++.+...+.+++.
T Consensus 197 -------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 -------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp -------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred -------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 4677888999999999999996553 23444 4444444545543
No 471
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=88.80 E-value=0.14 Score=46.50 Aligned_cols=89 Identities=16% Similarity=0.149 Sum_probs=53.2
Q ss_pred eEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhh----ccc-------cc-cccccccCCCCCCcccchh
Q 013393 290 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYD----RGL-------IG-TVHDWCESFSTYPRTYDLL 354 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~----rg~-------~~-~~~~~~~~~~~y~~~~dl~ 354 (444)
..|+|+.++-|++++.|... +- -+|+-++- +.-+...-+ .|+ +- +..|..+.+. -+.+||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCT--GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCC--cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCEE
Confidence 48999999999999888642 11 13444443 233332221 121 11 2234433322 24689999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 355 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 355 h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+++..+. .++-++-|+|+|||.+++--
T Consensus 156 ~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGAAAP----------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECSBBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 9887654 23457789999999999853
No 472
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=88.67 E-value=0.27 Score=45.46 Aligned_cols=94 Identities=9% Similarity=0.069 Sum_probs=57.2
Q ss_pred eeEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhHH----hhcccc---ccc-cccccCCCCC------Cccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKII----YDRGLI---GTV-HDWCESFSTY------PRTY 351 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~~----~~rg~~---~~~-~~~~~~~~~y------~~~~ 351 (444)
-++|+|+.++.|+.+..|... | - -.|+-++- +..+.+. -..|+- -+. .|..+.++.. +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 458999999999988877532 1 1 23444443 2333322 233542 111 2344433333 4789
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 352 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 352 dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
|+|-.+.--+ ....++-++-|.|||||.+++.+
T Consensus 149 D~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 9997764211 35677888889999999999965
No 473
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=88.53 E-value=0.27 Score=45.47 Aligned_cols=106 Identities=14% Similarity=0.188 Sum_probs=69.8
Q ss_pred eeEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhh----ccccc----cccccccCCCCCCcccchhhcc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLLHAW 357 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~----rg~~~----~~~~~~~~~~~y~~~~dl~h~~ 357 (444)
-..|+|+.++-|+++.+|... |- ..|+-++- +..+...-+ .|+-. ...|..+.|+. .+||++-++
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~~ 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPE--GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVILD 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHHhCCC--eEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEEC
Confidence 347999999999999988653 11 13444443 244443333 25422 34566776653 679998653
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEec-cHHHHHHHHHHHhhcc
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALK 407 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd-~~~~~~~~~~~~~~~~ 407 (444)
. .+...++-++-|+|+|||.+++-. ..+-+.++.+.++...
T Consensus 170 -----~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----L----PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----S----SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----C----CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1 134678999999999999998764 4566777777777665
No 474
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=88.46 E-value=0.68 Score=44.47 Aligned_cols=143 Identities=10% Similarity=0.033 Sum_probs=76.3
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhh------ccc----cccc-cccccCCCCCCcccchhh
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD------RGL----IGTV-HDWCESFSTYPRTYDLLH 355 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~------rg~----~~~~-~~~~~~~~~y~~~~dl~h 355 (444)
-.+|+|+.+|-|+++..+... ++ .+|+=++- +.-+.+.-+ .|+ +-+. .|..+..+..+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 378999999999999999876 43 24444443 222322211 121 1111 122222233468899998
Q ss_pred ccccccc-ccc-CCCChhhhhhhhcccccCCcEEEEec-----cHHHHHHHHHHHhhccceeEEeccccccCCCCCCCce
Q 013393 356 AWKVFSE-IEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 428 (444)
Q Consensus 356 ~~~~~~~-~~~-~~c~~~~~~~e~drilrp~g~~~~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 428 (444)
++. +.. ... ..-....++-++-|.|+|||.+++.- ..+.+.++.+.+++.--.+......- .....+...
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~v--p~~p~g~~~ 245 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFM--TTYPSGMWS 245 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEEC--TTSTTSEEE
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeec--CccCCCceE
Confidence 753 221 100 00112677889999999999999962 23444454444444433443322110 011123456
Q ss_pred EEEEEecc
Q 013393 429 VLIAKKKL 436 (444)
Q Consensus 429 ~l~~~k~~ 436 (444)
+++|.|++
T Consensus 246 f~~as~~~ 253 (296)
T 1inl_A 246 YTFASKGI 253 (296)
T ss_dssp EEEEESSC
T ss_pred EEEecCCC
Confidence 88999874
No 475
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=88.36 E-value=0.93 Score=41.64 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=66.0
Q ss_pred eEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc-----cc--cc-cccccccC-CCCCCcccchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR-----GL--IG-TVHDWCES-FSTYPRTYDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r-----g~--~~-~~~~~~~~-~~~y~~~~dl~h~~ 357 (444)
..|+|+.++.|.++.+|... |- -+|+-++. +..+...-++ |. +- ...|..+. |+ +.+||++-++
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~~~D~v~~~ 173 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEK--GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE--EAAYDGVALD 173 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC--TTCEEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--CCCcCEEEEC
Confidence 48999999999999888653 11 14444553 3444443333 41 11 22344443 33 2689988752
Q ss_pred ccccccccCCCChhhhhhhhcccccCCcEEEEeccH-HHHHHHHHHHhhccce
Q 013393 358 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWD 409 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~-~~~~~~~~~~~~~~w~ 409 (444)
. -+...++-++-|+|+|||.+++-+.. +-+.++.+.++...|.
T Consensus 174 -----~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 174 -----L----MEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp -----S----SCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred -----C----cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 1 13457899999999999999886654 3556666666555444
No 476
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=88.16 E-value=3.2 Score=40.17 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=60.7
Q ss_pred CCeEEEECCCcchHHHHHhh-CCceEEEcCcccchHHHHHHHHHc----CCCcEEEEecCccCCCC----CC----CccE
Q 013393 45 IRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYP----SR----SFEL 111 (444)
Q Consensus 45 ~~rVLDVGCGtG~~a~~La~-~~V~gvdis~~dis~a~i~~a~e~----~~~~~~~~~d~~~lp~~----~~----sFDl 111 (444)
++.|+++|||-=..+..+.. ..+.-+++.-.++-....+.-.+. ..+..+..+|..+ .+. .. +--.
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 35799999998887777762 233344443223222222222221 2234555566544 210 11 1235
Q ss_pred EEeccccccccccH--HHHHHHHHhhcCCCeEEEEEcCC
Q 013393 112 AHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 148 (444)
Q Consensus 112 I~~~~~~l~~~~d~--~~~L~ei~rvLkPGG~lvis~p~ 148 (444)
++...++++|+++. ..+++.+...+.||+++++....
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 66677789887654 37899999999999999997644
No 477
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=88.10 E-value=0.37 Score=44.87 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=51.4
Q ss_pred eEEEecccccchhhhhccCC---CceEEEeccccCC-Cc----hhHHhhc-cccccccccccCC--CCCCcccchhhccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK---DVWVMNVAPVRMS-AR----LKIIYDR-GLIGTVHDWCESF--STYPRTYDLLHAWK 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~---~~wv~~~~~~~~~-~~----l~~~~~r-g~~~~~~~~~~~~--~~y~~~~dl~h~~~ 358 (444)
..|+|+.++-|++++.|.+. .- .|+-++-. .- +...-+| .+.-+..|-.++. ...+.+||+|.++.
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 57999999999999877542 11 23333322 11 1122222 2333344443321 11245788887663
Q ss_pred cccccccCCCChhhhhh-hhcccccCCcEEEEe
Q 013393 359 VFSEIEERGCSFEDLLI-EMDRMLRPEGFVIIR 390 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~-e~drilrp~g~~~~r 390 (444)
-+ .+...+++ .+.|.|+|||.+++-
T Consensus 155 a~-------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 155 AQ-------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CC-------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 22 34555665 456699999999874
No 478
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=88.08 E-value=0.97 Score=42.84 Aligned_cols=145 Identities=12% Similarity=0.111 Sum_probs=78.1
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccC-CCchhHHhhc------cc----ccccc-ccccCCCCCCcccch
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR------GL----IGTVH-DWCESFSTYPRTYDL 353 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~-~~~l~~~~~r------g~----~~~~~-~~~~~~~~y~~~~dl 353 (444)
++-++|+|+.+|-|+++..+... ++ ..|+=++- +.-+.+.-+. ++ +-+.+ |-.+-+...+.+||+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeE
Confidence 34579999999999999988876 43 23333332 1222221111 11 11221 211112233689999
Q ss_pred hhcccccccccc-CCCChhhhhhhhcccccCCcEEEEec-----cHHHHHHHHHHHhhccceeEEeccccccCCCCCCCc
Q 013393 354 LHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEE 427 (444)
Q Consensus 354 ~h~~~~~~~~~~-~~c~~~~~~~e~drilrp~g~~~~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 427 (444)
|-++.... ... ...-....+-++-|.|+|||.+++.- ..+.+..+.+.+++.=-.+....+.-. ....+.-
T Consensus 152 Ii~d~~~~-~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp--~~~~g~w 228 (275)
T 1iy9_A 152 IMVDSTEP-VGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIP--TYPSGLW 228 (275)
T ss_dssp EEESCSSC-CSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCT--TSGGGCE
T ss_pred EEECCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecC--cccCcce
Confidence 98865332 111 11113577889999999999999973 244455555555554334433211100 0111235
Q ss_pred eEEEEEecc
Q 013393 428 RVLIAKKKL 436 (444)
Q Consensus 428 ~~l~~~k~~ 436 (444)
.+++|.|++
T Consensus 229 ~~~~ask~~ 237 (275)
T 1iy9_A 229 TFTIGSKKY 237 (275)
T ss_dssp EEEEEESSC
T ss_pred EEEEeeCCC
Confidence 688898874
No 479
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=88.01 E-value=0.36 Score=46.13 Aligned_cols=130 Identities=14% Similarity=0.192 Sum_probs=81.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhHHh----hccc---cc-cccccccCCCCCCccc---chhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIY----DRGL---IG-TVHDWCESFSTYPRTY---DLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~~~----~rg~---~~-~~~~~~~~~~~y~~~~---dl~h~~ 357 (444)
..|+|+.+|-|.++.+|...|-+ +|+=++- +.-|.+.- ..|+ +- +..||.+.+ |.+| |+|-++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---KEKFASIEMILSN 199 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---GGGTTTCCEEEEC
T ss_pred CEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---ccccCCCCEEEEc
Confidence 37999999999999988754433 4555553 34444332 2354 22 234666654 3678 999876
Q ss_pred ccccccc---------------cCCCChhhhhhhhc-ccccCCcEEEEeccHHHHHHHHHHHhhccceeEEeccccccCC
Q 013393 358 KVFSEIE---------------ERGCSFEDLLIEMD-RMLRPEGFVIIRDKSSIINYIRKFITALKWDGWLSEVEPRIDA 421 (444)
Q Consensus 358 ~~~~~~~---------------~~~c~~~~~~~e~d-rilrp~g~~~~rd~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 421 (444)
--+.... -..++-..++-++= +.|+|||++++.-..+--+++++++... ++. .+
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~--~~~-~D------- 269 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT--VFL-KD------- 269 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC--EEE-EC-------
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC--Cee-cc-------
Confidence 3222100 01233447788888 9999999999976666667788777765 331 22
Q ss_pred CCCCCceEEEEEec
Q 013393 422 LSSSEERVLIAKKK 435 (444)
Q Consensus 422 ~~~~~~~~l~~~k~ 435 (444)
-.+.+++++++++
T Consensus 270 -~~g~~R~~~~~~k 282 (284)
T 1nv8_A 270 -SAGKYRFLLLNRR 282 (284)
T ss_dssp -TTSSEEEEEEECC
T ss_pred -cCCCceEEEEEEc
Confidence 1246899988875
No 480
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=87.89 E-value=0.29 Score=48.05 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=67.6
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccCC-CchhHHhh----ccc----cccccccccCCCCC----Ccccchhhc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL----IGTVHDWCESFSTY----PRTYDLLHA 356 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~~-~~l~~~~~----rg~----~~~~~~~~~~~~~y----~~~~dl~h~ 356 (444)
..|+|+.++-|+|+.++..... .|+-++.. .-+...-+ .|+ +-+++.=++.+... ..+||+|=+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 3799999999999988875433 56666653 33433222 233 22222222222111 358999977
Q ss_pred ccc-cccccc-----CCCChhhhhhhhcccccCCcEEEEec-------cHHHHHHHHHHHhhccceeE
Q 013393 357 WKV-FSEIEE-----RGCSFEDLLIEMDRMLRPEGFVIIRD-------KSSIINYIRKFITALKWDGW 411 (444)
Q Consensus 357 ~~~-~~~~~~-----~~c~~~~~~~e~drilrp~g~~~~rd-------~~~~~~~~~~~~~~~~w~~~ 411 (444)
+-- |....+ ..-....++-++-|+|+|||.+++-. ...+.+-+++.+.....++.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 433 221000 00125678889999999999977732 23444555556666666554
No 481
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=87.83 E-value=0.078 Score=46.37 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=58.9
Q ss_pred eEEEecccccchhhhhccCCCceEEEeccccC-CCchhH----Hhhccc---cccc-cccccCCCCC---Ccccchhhcc
Q 013393 290 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKI----IYDRGL---IGTV-HDWCESFSTY---PRTYDLLHAW 357 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~~~wv~~~~~~~~-~~~l~~----~~~rg~---~~~~-~~~~~~~~~y---~~~~dl~h~~ 357 (444)
..|+|+.++.|+++.++...+. .+|+-++- +..+.. +-..|+ +-++ .|+.+..+.. +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 4899999999999887665442 24554543 233332 222233 2222 2444422211 4689999988
Q ss_pred ccccccccCCCChhhhhhhh--cccccCCcEEEEeccH
Q 013393 358 KVFSEIEERGCSFEDLLIEM--DRMLRPEGFVIIRDKS 393 (444)
Q Consensus 358 ~~~~~~~~~~c~~~~~~~e~--drilrp~g~~~~rd~~ 393 (444)
..|.. -....++-++ -|+|+|||.+++....
T Consensus 124 ~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYAK-----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGGG-----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCc-----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 77651 1345566666 9999999999996443
No 482
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.75 E-value=1.3 Score=47.57 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=40.4
Q ss_pred CCCccEEEecccccccccc--HHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 106 SRSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~~~d--~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
+..||.++.-...-...++ ...+|.++.++++|||.+.-.+.. ..+++.+.+.||.+....
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA------------GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 4679999874311111111 158999999999999998742111 357788889999876644
No 483
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=87.61 E-value=0.26 Score=45.16 Aligned_cols=114 Identities=10% Similarity=0.107 Sum_probs=66.6
Q ss_pred eeEEEecccccchhhhhccCC-CceEEEeccccCC-CchhH----Hhhccccc--c-ccccccCCC--CCCcccchhhcc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKI----IYDRGLIG--T-VHDWCESFS--TYPRTYDLLHAW 357 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~----~~~rg~~~--~-~~~~~~~~~--~y~~~~dl~h~~ 357 (444)
-..|+|+.+|.|.++..|... |- .+|+-++-. .-+.. +-+.|+-. + -.|-.+.++ .-+.++|.+++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~--~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPE--QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCC--CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 357999999999999988632 21 245545532 33332 33445422 1 223222212 125899999875
Q ss_pred cccccccc-----CCCChhhhhhhhcccccCCcEEEEe-ccHHHHHHHHHHHhh
Q 013393 358 KVFSEIEE-----RGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITA 405 (444)
Q Consensus 358 ~~~~~~~~-----~~c~~~~~~~e~drilrp~g~~~~r-d~~~~~~~~~~~~~~ 405 (444)
.... +.+ +|---..++-++-|+|+|||.+++. |.....+.+..++..
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 2211 111 1222235889999999999999886 455556666666654
No 484
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=87.53 E-value=0.35 Score=46.95 Aligned_cols=119 Identities=14% Similarity=0.097 Sum_probs=64.3
Q ss_pred eEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc----cc--cccccccccCCCCCCcccchhhccc--
Q 013393 290 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR----GL--IGTVHDWCESFSTYPRTYDLLHAWK-- 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r----g~--~~~~~~~~~~~~~y~~~~dl~h~~~-- 358 (444)
..|+|+.++-|+++..|... +- -.|+-++- +.-+..+-++ |+ +-+.+.=.+.++.++.+||+|-++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPC 197 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCC
Confidence 47999999999998888641 11 12444443 2344443332 44 2222222233333567899998753
Q ss_pred ----cccccc--cCCCC----------hhhhhhhhcccccCCcEEEEec----cHHHHHHHHHHHhhcccee
Q 013393 359 ----VFSEIE--ERGCS----------FEDLLIEMDRMLRPEGFVIIRD----KSSIINYIRKFITALKWDG 410 (444)
Q Consensus 359 ----~~~~~~--~~~c~----------~~~~~~e~drilrp~g~~~~rd----~~~~~~~~~~~~~~~~w~~ 410 (444)
.+.... ..+-+ -..+|-++-|+|+|||.+++-. ..+--+.|+.+++...++.
T Consensus 198 sg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 198 TGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp TSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred CCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 232100 00000 1478889999999999999931 1122233445555544443
No 485
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=87.45 E-value=0.24 Score=44.48 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=55.3
Q ss_pred eeEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc----cc--cc-cccccccCCCCCCcccchhhccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR----GL--IG-TVHDWCESFSTYPRTYDLLHAWK 358 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r----g~--~~-~~~~~~~~~~~y~~~~dl~h~~~ 358 (444)
-..|+|+.++.|.+++.|... |- -+|+-++. +..+...-++ |+ +- ...|..+.++ -+.+||+|.++.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~ 154 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGED--GLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTA 154 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESS
T ss_pred CCEEEEECCCccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECC
Confidence 348999999999999888642 10 13444443 2334333322 32 11 1223333332 146899999988
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEEeccH
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 393 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~ 393 (444)
.+.... -++-|+|+|||.+++--..
T Consensus 155 ~~~~~~----------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP----------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC----------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH----------HHHHHHcCCCcEEEEEECC
Confidence 776322 2788999999999886443
No 486
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=87.28 E-value=0.17 Score=49.63 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=60.9
Q ss_pred eEEEecccccchhhhhccCC-CceEEEeccccCC-CchhHH----hhccccccccccccCCCCCCcccchhhcccccccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKII----YDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~-~~l~~~----~~rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~ 363 (444)
..|+|+.+|.|.++..+... |-+ +|+-++.. .-+... -..|+-..+ -+...++.-+.+||+|-++..|...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccC
Confidence 36999999999999888642 221 34444432 223322 223432211 1233333337899999999888621
Q ss_pred c-cCCCChhhhhhhhcccccCCcEEEEec
Q 013393 364 E-ERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 364 ~-~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
. ...-....++-|+-|+|+|||.+++-.
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 0 011236788999999999999998853
No 487
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.28 E-value=0.58 Score=46.70 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=58.7
Q ss_pred CCCCCCCCCeEEEECCCc-chHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCccCCC--------
Q 013393 38 KLNNGGNIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-------- 104 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGt-G~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~lp~-------- 104 (444)
.++++. +||-+|||. |.++..+++. .|++++. ++...+++++.|. .. .+.....+
T Consensus 182 ~~~~g~---~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~-----~~~~~~~a~~lGa--~~--i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 182 GVKPGS---HVYIAGAGPVGRCAAAGARLLGAACVIVGDQ-----NPERLKLLSDAGF--ET--IDLRNSAPLRDQIDQI 249 (398)
T ss_dssp TCCTTC---EEEEECCSHHHHHHHHHHHHHTCSEEEEEES-----CHHHHHHHHTTTC--EE--EETTSSSCHHHHHHHH
T ss_pred CCCCCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-----CHHHHHHHHHcCC--cE--EcCCCcchHHHHHHHH
Confidence 345555 899999975 7777777762 4555544 4556667776665 22 22221111
Q ss_pred -CCCCccEEEeccccccc--------cccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 105 -PSRSFELAHCSRCRIDW--------LQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 105 -~~~sFDlI~~~~~~l~~--------~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
....||+|+-.-. ... ..+....+.++.+.|+|||++++..
T Consensus 250 ~~g~g~Dvvid~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 1236999986542 111 0112357899999999999998754
No 488
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=87.24 E-value=0.16 Score=49.90 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=60.2
Q ss_pred CceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhh-ccccccccccccCCCCCCcccchhhccccccccc
Q 013393 287 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD-RGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 364 (444)
Q Consensus 287 ~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~-rg~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~~ 364 (444)
.....|+|+..+.|.++.+|.+. |-. .|+-+|-+..+...-+ .++-=+-+|-.++ .|. ||++.+.+++..+.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~p~-~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKL--KCIVFDRPQVVENLSGSNNLTYVGGDMFTS---IPN-ADAVLLKYILHNWT 260 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCBTTEEEEECCTTTC---CCC-CSEEEEESCGGGSC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCC--eEEEeeCHHHHhhcccCCCcEEEeccccCC---CCC-ccEEEeehhhccCC
Confidence 34578999999999999999743 311 2222222211111111 1222223454443 454 99999999987543
Q ss_pred cCCCChhhhhhhhcccccC---CcEEEEec
Q 013393 365 ERGCSFEDLLIEMDRMLRP---EGFVIIRD 391 (444)
Q Consensus 365 ~~~c~~~~~~~e~drilrp---~g~~~~rd 391 (444)
.. ....+|-++-|.|+| ||.++|-|
T Consensus 261 d~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 261 DK--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp HH--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred HH--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 22 234899999999999 99998864
No 489
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=87.13 E-value=0.41 Score=47.24 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=58.0
Q ss_pred CCCCCCCCCeEEEECCCc-chHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecC---ccC-CCCCCC
Q 013393 38 KLNNGGNIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT---KRL-PYPSRS 108 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGt-G~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~---~~l-p~~~~s 108 (444)
.++++. +||-+|||. |.++..+++. .|++++. ++...+.+++.+....+...+. +.+ ....+.
T Consensus 187 ~~~~g~---~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~-----~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 187 KVTPAS---SFVTWGAGAVGLSALLAAKVCGASIIIAVDI-----VESRLELAKQLGATHVINSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCCTTC---EEEEESCSHHHHHHHHHHHHHTCSEEEEEES-----CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSC
T ss_pred CCCCCC---EEEEECCCHHHHHHHHHHHHcCCCeEEEECC-----CHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCC
Confidence 445554 899999985 7777777762 3555543 4566677777775433321110 000 011236
Q ss_pred ccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 109 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 109 FDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
||+|+-... ....+.++.+.|+|||.+++..
T Consensus 259 ~D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 259 VNFALESTG-------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEEEECSC-------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCC-------CHHHHHHHHHHHhcCCEEEEeC
Confidence 999985431 1357888999999999999854
No 490
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=86.94 E-value=0.73 Score=45.54 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=60.2
Q ss_pred CCceeEEEecccccchhhhhccC-CCceEEEeccccCCCchhHHhhc-cccccccccccCCCCCCcccchhhcccccccc
Q 013393 286 KNTFRNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMSARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 286 ~~~~rnvmDm~a~~G~f~a~~~~-~~~wv~~~~~~~~~~~l~~~~~r-g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~ 363 (444)
......|+|...+.|.++.+|.+ .|-. .++-.|-+..+...-++ ++-=+-+|.-++ +|.. |++.+.+++..+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vlh~~ 274 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSI--NAINFDLPHVIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWICHDW 274 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGGB
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCC--EEEEEehHHHHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechhhcC
Confidence 45678999999999999999864 2321 12222221111111111 121223444444 4544 999999988744
Q ss_pred ccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 364 EERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 364 ~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
... ....+|-++=|.|+|||.++|-|
T Consensus 275 ~~~--~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDE--HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 321 34578999999999999999965
No 491
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=86.74 E-value=1.5 Score=41.17 Aligned_cols=110 Identities=13% Similarity=0.104 Sum_probs=69.2
Q ss_pred ceeEEEecccccchhhhhccCC--CceEEEeccccC-CCchhHHhhc-----cc--cc-cccccccCCCCCCcccchhhc
Q 013393 288 TFRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR-----GL--IG-TVHDWCESFSTYPRTYDLLHA 356 (444)
Q Consensus 288 ~~rnvmDm~a~~G~f~a~~~~~--~~wv~~~~~~~~-~~~l~~~~~r-----g~--~~-~~~~~~~~~~~y~~~~dl~h~ 356 (444)
.-..|+|+.++.|+++..|... |. .+|+-++- +..+..+-++ |+ +- .-.|..+.++ +.+||+|-+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~ 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIA 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEE
Confidence 3358999999999999888653 22 13444443 3444433332 42 11 2234555443 368999876
Q ss_pred cccccccccCCCChhhhhhhhcccccCCcEEEEeccHH-HHHHHHHHHhhcccee
Q 013393 357 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS-IINYIRKFITALKWDG 410 (444)
Q Consensus 357 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd~~~-~~~~~~~~~~~~~w~~ 410 (444)
+ .. +...++-++-|+|+|||.+++-+... -.+++.+.+....|..
T Consensus 186 ~-----~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 186 D-----IP----DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp C-----CS----CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred c-----Cc----CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 2 11 24678899999999999998866543 5667766666655554
No 492
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=86.65 E-value=0.89 Score=38.70 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=43.7
Q ss_pred CCCCCCccEEEeccccc-cccccHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeeecce
Q 013393 103 PYPSRSFELAHCSRCRI-DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQT 181 (444)
Q Consensus 103 p~~~~sFDlI~~~~~~l-~~~~d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~~~~ 181 (444)
..|+++||.|+...-.- ....-...++..+++.|||||.|.. .+. -...+.++. ||.+....+.
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g--------l~~----~~~~Eaila--Gfvv~~~~~~- 118 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG--------LSD----IYKVDALIN--GFEIINEPDY- 118 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC--------CCH----HHHHHHHHH--TEEEECSSSC-
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe--------cCc----chhhHHHhh--ccEeccCCCc-
Confidence 45688999999643111 1112237899999999999999985 111 123444444 8876653222
Q ss_pred eEeeccCc
Q 013393 182 VIWAKPIS 189 (444)
Q Consensus 182 ~~w~k~l~ 189 (444)
.|.||-.
T Consensus 119 -~~~KP~~ 125 (136)
T 2km1_A 119 -CWIKMDS 125 (136)
T ss_dssp -EEEEC--
T ss_pred -eeeccCc
Confidence 7999854
No 493
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=86.59 E-value=0.78 Score=45.33 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=60.6
Q ss_pred CCceeEEEecccccchhhhhccCC-CceEEEeccccCCCchhHHhhc-cccccccccccCCCCCCcccchhhcccccccc
Q 013393 286 KNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 363 (444)
Q Consensus 286 ~~~~rnvmDm~a~~G~f~a~~~~~-~~wv~~~~~~~~~~~l~~~~~r-g~~~~~~~~~~~~~~y~~~~dl~h~~~~~~~~ 363 (444)
......|+|+..+-|.++.+|.+. |-. .++-.|-|..+...-++ ++-=+-+|..+++ |.. |++.+.+++-.+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~---p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTI--KGVNFDLPHVISEAPQFPGVTHVGGDMFKEV---PSG-DTILMKWILHDW 272 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTCC---CCC-SEEEEESCGGGS
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCC--eEEEecCHHHHHhhhhcCCeEEEeCCcCCCC---CCC-CEEEehHHhccC
Confidence 456789999999999999999642 321 12222222111111111 1222334544444 444 999999988744
Q ss_pred ccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 364 EERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 364 ~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
... +...+|-++=|.|+|||.++|-|
T Consensus 273 ~d~--~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 273 SDQ--HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp CHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 321 35678999999999999999965
No 494
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=86.47 E-value=0.43 Score=44.52 Aligned_cols=94 Identities=11% Similarity=0.092 Sum_probs=57.1
Q ss_pred eeEEEecccccchhhhhccCC-C-ceEEEeccccC-CCchhH----Hhhccc---cccc-cccccCCCCC------Cccc
Q 013393 289 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKI----IYDRGL---IGTV-HDWCESFSTY------PRTY 351 (444)
Q Consensus 289 ~rnvmDm~a~~G~f~a~~~~~-~-~wv~~~~~~~~-~~~l~~----~~~rg~---~~~~-~~~~~~~~~y------~~~~ 351 (444)
-++|+|+.++.|.++..|... | - -.|+-++. +..+.+ +-..|+ |-+. .|..+..+.. +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 358999999999998877532 1 1 24444443 233332 222344 2122 1333322332 5789
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 352 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 352 dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
|+|-++.-. -....++-++-|.|||||.+++.|
T Consensus 158 D~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999766421 236677888899999999999864
No 495
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=86.15 E-value=0.84 Score=44.75 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=57.3
Q ss_pred CCCCCCCCCeEEEECCCc-chHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEe--cCcc----CC-CC
Q 013393 38 KLNNGGNIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVL--GTKR----LP-YP 105 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGt-G~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~--d~~~----lp-~~ 105 (444)
.++++. +||-+|+|. |.++..+++. .|++++ .++...+++++.|....+... +..+ +. ..
T Consensus 168 ~~~~g~---~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~-----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 168 GVTLGH---KVLVCGAGPIGMVTLLVAKAMGAAQVVVTD-----LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCCTTC---EEEEECCSHHHHHHHHHHHHTTCSEEEEEE-----SCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEC-----CCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh
Confidence 344554 899999874 7777777762 345554 445666777777765333211 0001 00 00
Q ss_pred CCCccEEEeccccccccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 106 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
.+.||+|+-.-. ....+.+..+.|+|||.+++..
T Consensus 240 ~~g~D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG-------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC-------ChHHHHHHHHHhcCCCEEEEEe
Confidence 146999985431 1346788899999999999854
No 496
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.12 E-value=1.4 Score=41.27 Aligned_cols=69 Identities=14% Similarity=0.007 Sum_probs=0.0
Q ss_pred CCCCCccEEEeccccccccc---------------cHHHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHH
Q 013393 104 YPSRSFELAHCSRCRIDWLQ---------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLK 168 (444)
Q Consensus 104 ~~~~sFDlI~~~~~~l~~~~---------------d~~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~ 168 (444)
.++++||+|++.- -.... .....+.++.++|+|||.+++ .........+..++.
T Consensus 19 l~~~~vdlI~~DP--PY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v---------~~~d~~~~~~~~~~~ 87 (260)
T 1g60_A 19 VENKSVQLAVIDP--PYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYI---------FNTPFNCAFICQYLV 87 (260)
T ss_dssp SCTTCEEEEEECC--CCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEE---------EECHHHHHHHHHHHH
T ss_pred ccccccCEEEECC--CCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEE---------EcCcHHHHHHHHHHH
Q ss_pred hcCeEEEeeecceeEeecc
Q 013393 169 SMCWKIVSKKDQTVIWAKP 187 (444)
Q Consensus 169 ~~gf~~v~~~~~~~~w~k~ 187 (444)
+.||.... ..+|.|+
T Consensus 88 ~~gf~~~~----~iiW~K~ 102 (260)
T 1g60_A 88 SKGMIFQN----WITWDKR 102 (260)
T ss_dssp HTTCEEEE----EEEECCC
T ss_pred hhccceeE----EEEEEec
No 497
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=85.95 E-value=0.17 Score=46.01 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=51.3
Q ss_pred eEEEecccccchhhhhccCC--C-ceEEEeccccCC-CchhHH---h-hc-cccccccccccC--CCCCCcccchhhccc
Q 013393 290 RNVMDMNSNLGGFAAALKDK--D-VWVMNVAPVRMS-ARLKII---Y-DR-GLIGTVHDWCES--FSTYPRTYDLLHAWK 358 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~--~-~wv~~~~~~~~~-~~l~~~---~-~r-g~~~~~~~~~~~--~~~y~~~~dl~h~~~ 358 (444)
..|+|+.+|-|.++..|.+. | - +|+-++.. .-+... . .+ ++--+..|-.+. +...+.+||++-++.
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEG---KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCe---EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 47999999999999888642 1 1 22323321 111111 1 11 221122233331 122356899998654
Q ss_pred cccccccCCCChhhhhhhhcccccCCcEEEE
Q 013393 359 VFSEIEERGCSFEDLLIEMDRMLRPEGFVII 389 (444)
Q Consensus 359 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 389 (444)
... -....++-++-|+|+|||.+++
T Consensus 152 ~~~------~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 152 AQP------TQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp CST------THHHHHHHHHHHHEEEEEEEEE
T ss_pred CCH------hHHHHHHHHHHHhcCCCCEEEE
Confidence 311 1233558999999999999988
No 498
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.75 E-value=1.4 Score=43.88 Aligned_cols=99 Identities=16% Similarity=0.113 Sum_probs=60.2
Q ss_pred CCCCCCCCCeEEEECCCc-chHHHHHhhC----CceEEEcCcccchHHHHHHHHHcCCCcEEEEecCcc-CC------CC
Q 013393 38 KLNNGGNIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-LP------YP 105 (444)
Q Consensus 38 ~L~~g~~~~rVLDVGCGt-G~~a~~La~~----~V~gvdis~~dis~a~i~~a~e~~~~~~~~~~d~~~-lp------~~ 105 (444)
.++++. +||-+|||. |.++..+++. .|+++ +.++...+++++.|.. ........ +. ..
T Consensus 182 ~~~~g~---~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~-----~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 182 GVGPGS---TVYVAGAGPVGLAAAASARLLGAAVVIVG-----DLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp TCCTTC---EEEEECCSHHHHHHHHHHHHTTCSEEEEE-----ESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHS
T ss_pred CCCCCC---EEEEECCcHHHHHHHHHHHHCCCCeEEEE-----cCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhC
Confidence 344554 899999875 7777777763 34554 4456667788777753 22111111 00 11
Q ss_pred CCCccEEEeccccc--------cccccHHHHHHHHHhhcCCCeEEEEEc
Q 013393 106 SRSFELAHCSRCRI--------DWLQRDGILLLELDRLLRPGGYFVYSS 146 (444)
Q Consensus 106 ~~sFDlI~~~~~~l--------~~~~d~~~~L~ei~rvLkPGG~lvis~ 146 (444)
...+|+|+-.-..- .+.++....+.++.+.|++||.+++..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 24699998654211 112344568999999999999998754
No 499
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=85.73 E-value=0.2 Score=45.47 Aligned_cols=90 Identities=14% Similarity=0.084 Sum_probs=52.9
Q ss_pred eEEEecccccchhhhhccCC------CceEEEeccccC-CCchhHHh----hccc-------ccc-ccccccCCC---CC
Q 013393 290 RNVMDMNSNLGGFAAALKDK------DVWVMNVAPVRM-SARLKIIY----DRGL-------IGT-VHDWCESFS---TY 347 (444)
Q Consensus 290 rnvmDm~a~~G~f~a~~~~~------~~wv~~~~~~~~-~~~l~~~~----~rg~-------~~~-~~~~~~~~~---~y 347 (444)
..|+|+.++.|.+++.|... |-. +|+-++. +.-+...- +.|+ +-+ ..|..+.++ .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 48999999999999888642 211 3333443 22333222 2231 111 123333210 12
Q ss_pred CcccchhhccccccccccCCCChhhhhhhhcccccCCcEEEEec
Q 013393 348 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 391 (444)
Q Consensus 348 ~~~~dl~h~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~rd 391 (444)
+.+||+|+++..+. .++-++-|+|+|||.+++--
T Consensus 160 ~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 36799999887665 24567789999999998853
No 500
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=85.65 E-value=2.8 Score=44.79 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=40.6
Q ss_pred CCCccEEEeccccccccccH----HHHHHHHHhhcCCCeEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCeEEEeee
Q 013393 106 SRSFELAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 178 (444)
Q Consensus 106 ~~sFDlI~~~~~~l~~~~d~----~~~L~ei~rvLkPGG~lvis~p~~~~~~~~~~~~~~~l~~l~~~~gf~~v~~~ 178 (444)
...||+|+.-. +.-..++ ..+|.++.++++|||.+.-.+.. ..+++.+.+.||.+....
T Consensus 177 ~~~~d~~~~D~--f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDG--FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA------------GFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECC--SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECC--CCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 46799998743 1111222 47999999999999998752211 357778889999876543
Done!