BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013394
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 140/309 (45%), Gaps = 45/309 (14%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +ACS + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRA 150
Query: 143 -YAGSTDMEIWIIP--SFENSAWSIMAISFISLL--AMSAVLATCFFVRRHRIRREAPRA 197
+ + ++P +F + I + LL AM AV+ R R++R
Sbjct: 151 LFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQHRKRLQRN---- 206
Query: 198 SRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAF 257
RL K I T + CAICL++Y G+KLR+LPC H +H+
Sbjct: 207 -----------RLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSR 255
Query: 258 CVDSWLTSWRTFCPVCKRDAR-----------------TSTGEP---PASESTPLLSSSP 297
CVD WLT R CP+CK+ GEP PASE TPLL SSP
Sbjct: 256 CVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPASERTPLLGSSP 315
Query: 298 ASSSILSSI 306
+ S+
Sbjct: 316 TLPTSFGSL 324
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRG-G 86
N T +FDD+ A F + G G L ++P +AC + + N S+AF++ IR
Sbjct: 43 NGTQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLR-DNSSTAFIVLIRRLE 101
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLKQ 142
C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ +AS LK+
Sbjct: 102 CNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEILKKIDIPSVFIGEASANSLKE 160
Query: 143 -YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGR 201
+ + +IP F + I F+ ++ + +L F + + +
Sbjct: 161 EFTYEKGGHVVLIPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRA 213
Query: 202 EFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDS 261
+ + + +K +P F E + CAICL++Y G+KLRILPC H +H CVD
Sbjct: 214 RRNRLRKDQLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
Query: 262 WLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL 293
WLT + CPVCK+ S G E SE+TPLL
Sbjct: 270 WLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLL 312
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 146/310 (47%), Gaps = 46/310 (14%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +ACS + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSDEGLQGFLVEAHPENACSPIAPPPSAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRA 150
Query: 143 -YAGSTDMEIWIIP--SFENSAWSIMAISFISLLAMSAVLATCFFVR--RHRIRREAPRA 197
+ + ++P SF + I + LL ++ + T VR +HR R + R
Sbjct: 151 LFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRCIQHRKRLQRNR- 207
Query: 198 SRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAF 257
+++ +K +P+ + E + CAICL++Y G+KLRILPC H +H+
Sbjct: 208 --------LTKEQLKQIPTHDYQKGDEYD----VCAICLDEYEDGDKLRILPCAHAYHSR 255
Query: 258 CVDSWLTSWRTFCPVCKRDARTSTG---------------------EPPASESTPLLSSS 296
CVD WLT R CP+CK+ G + PASE TPLL SS
Sbjct: 256 CVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQGQEEEGDEGEPRDQPASEWTPLLGSS 315
Query: 297 PASSSILSSI 306
P + S+
Sbjct: 316 PTLPTSFGSL 325
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 145/309 (46%), Gaps = 45/309 (14%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +AC + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSDEGLQGFLVEAHPENACGPIAPPPSAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRA 150
Query: 143 -YAGSTDMEIWIIP--SFENSAWSIMAISFISLLAMSAVLATCFFVR--RHRIRREAPRA 197
+ + ++P SF + I + LL ++ + T VR +HR R + R
Sbjct: 151 LFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRCIQHRKRLQRNR- 207
Query: 198 SRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAF 257
+++ +K +P+ + E + CAICL++Y G+KLR+LPC H +H+
Sbjct: 208 --------LTKEQLKQIPTHDYQKGDEYD----VCAICLDEYEDGDKLRVLPCAHAYHSR 255
Query: 258 CVDSWLTSWRTFCPVCKRDARTSTG--------------------EPPASESTPLLSSSP 297
CVD WLT R CP+CK+ G + PASE TPLL SSP
Sbjct: 256 CVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQEEGDEGEPRDQPASEWTPLLGSSP 315
Query: 298 ASSSILSSI 306
+ S+
Sbjct: 316 TLPTSFGSL 324
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 32/301 (10%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + + ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVRDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F++KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDEKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGRE 202
+ I ++P F + I F+ ++ + +L F + + +
Sbjct: 162 FTYEKGGHIILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRAR 214
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
+ + + +K +P F E + CAICL++Y G+KLRILPC H +H CVD W
Sbjct: 215 RNRLRKDQLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 263 LTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIR 307
LT + CPVCK+ S G E SE TPLL S+S S LS R
Sbjct: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASASTQSFGALSESR 330
Query: 308 S 308
S
Sbjct: 331 S 331
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 145/306 (47%), Gaps = 31/306 (10%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +F+D+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDTLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGRE 202
+ I ++P + I F+ ++ + +L F + + +
Sbjct: 162 FTYEKGGHIILVPEL-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRNR 214
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
+ + + +K +P F E CAICLE+Y G+KLRILPC H +H CVD W
Sbjct: 215 RNRLRKDQLKKLPVHKFKKGDE----YDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 263 LTSWRTFCPVCKRDARTSTG-----------EPPASESTPLLSSSPASSSILSSIRSSLA 311
LT + CPVCK+ S G E SE TPLL P S+S + SL+
Sbjct: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PPSASARTQSFGSLS 327
Query: 312 SSSALH 317
S + H
Sbjct: 328 ESHSHH 333
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 31/314 (9%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +F+D+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDILKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGRE 202
+ + ++P + I F+ ++ + +L F + + +
Sbjct: 162 FTYEKGGHVILVPEL-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRNR 214
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
+ + + +K +P F E + CAICLE+Y G+KLRILPC H +H CVD W
Sbjct: 215 RNRLRKDQLKKLPVHKFKKGDEYD----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 263 LTSWRTFCPVCKRDARTSTG-----------EPPASESTPLLSSSPASSSILSSIRSSLA 311
LT + CPVCK+ S G E SE TPLL P S+S + SL+
Sbjct: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PPSASARTQSFGSLS 327
Query: 312 SSSALHIPPSMSHS 325
S + H+ S +
Sbjct: 328 ESHSHHMTESSDYE 341
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 142/301 (47%), Gaps = 32/301 (10%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGRE 202
+ + ++P F + I F+ ++ + +L F + + +
Sbjct: 162 FTYEKGGHLILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRAR 214
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
+ + + +K +P F E CAICL++Y G+KLRILPC H +H CVD W
Sbjct: 215 RNRLRKDQLKKLPVHKFKKGDE----YDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 263 LTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIR 307
LT + CPVCK+ S G E +E TPLL S S S LS R
Sbjct: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESR 330
Query: 308 S 308
S
Sbjct: 331 S 331
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 142/301 (47%), Gaps = 32/301 (10%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGRE 202
+ + ++P F + I F+ ++ + +L F + + +
Sbjct: 162 FTYEKGGHLILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV------QDRHRAR 214
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
+ + + +K +P F E CAICL++Y G+KLRILPC H +H CVD W
Sbjct: 215 RNRLRKDQLKKLPVHKFKKGDE----YDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 263 LTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIR 307
LT + CPVCK+ S G E +E TPLL S S S LS R
Sbjct: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESR 330
Query: 308 S 308
S
Sbjct: 331 S 331
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 3 LSVVYLLCVLLICRLASANVVLIGNNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDAC 62
+ + +L +L + A VL N+ ++ F D+ A F + G G L +P +AC
Sbjct: 83 VKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPANAC 142
Query: 63 SNLTSKVEKVSNMS-SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMA-- 119
+ + ++ N S A VL R C+F+ KV NAQ+AGFEAAIV++ D LV+M
Sbjct: 143 HPI--EAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHV 199
Query: 120 --GNSAGIKIHAVFVSKASGEKLKQYAGSTDMEIWII-----PSFENSAWSIMAISFISL 172
I I +VFVS+A+ + L+ G ++ P + ++ +S++ L
Sbjct: 200 YEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWV-L 258
Query: 173 LAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED-NCTSRT 231
A++ + FFV H S RR VK S A V +
Sbjct: 259 GCTLALVVSAFFVLNHLWLWAQACCSH--------RRPVKT--STCQKAQVRTFTWHNDL 308
Query: 232 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 275
CAICL++Y G++L+ILPC H +H C+D W + R CPVCK+
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 140/286 (48%), Gaps = 28/286 (9%)
Query: 3 LSVVYLLCVLLICRLASANVVLIGNNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDAC 62
+ + +L VL + A +L + ++ F D+ A F + G G L +P +AC
Sbjct: 83 VKALLVLSVLQVPAQAVVRAMLEDISSSVDFADLPALFGVPLAPEGIRGYLMEVKPANAC 142
Query: 63 SNLTSKVEKVSNMS-SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGN 121
+ + ++ N S A L R C+F+ KV NAQ+AGFEAAIV++ D LV+M
Sbjct: 143 HPV--EAPRLGNRSLGAIALIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHV 199
Query: 122 SAGIK----IHAVFVSKASGEKLKQYAG-STDMEIWIIPS----FENSAWSIMAISFISL 172
S ++ I +VFV +A+ + L+ G + ++P + ++ +S+
Sbjct: 200 SEDLRGQIAIPSVFVGEAASQDLRVILGCDKSAHVLLLPDDPPCRDLDCHPVLTVSWALG 259
Query: 173 LAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRT- 231
++ V++T F + R + +A RRLVK S A V T R
Sbjct: 260 RTLALVVSTLFVLNRLWLWAQA---------CCSHRRLVKT--STCQKAQVR-TFTRRND 307
Query: 232 -CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 275
CAICL++Y G++L+ILPC H +H C+D W + R CPVCK+
Sbjct: 308 LCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
L RG C+FE+KV++ + I+Y+++ L M I AV + G+ L
Sbjct: 144 LVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDL 203
Query: 141 -----KQYAGSTDM-----EIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRI 190
K Y + + + I S ++ ++ISFI L+ +S V ++++R R
Sbjct: 204 SLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRY 263
Query: 191 RREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPC 250
+ + SR ++++ + +P+ E + S CAIC+E Y + +RILPC
Sbjct: 264 MQAKDQQSRN--LCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPC 321
Query: 251 RHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSP 297
+H+FH C+D WL RT CP+CK D G +L P
Sbjct: 322 KHEFHKNCIDPWLIEHRT-CPMCKLDVLKFYGYVFLGSEESILEYQP 367
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 47 SGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFV-LTIRGGCSFEDKVRNAQKAGFEAAI 105
G GV P + C+ T V + ++ +V L RGGC+F+DKV A + A +
Sbjct: 73 QGLVGVPRAPAPAEGCAPDTRFVAPGALGNAPWVALVARGGCTFKDKVLAAARRNASAVV 132
Query: 106 VYDNEDDG-------------VLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGSTDMEIW 152
VY+ E +G ++V M G +I V K K++ G+ M+ +
Sbjct: 133 VYNLESNGNATEPMSHAGTGNIVVIMISYPKGREIFD-LVQKGIPVKMRIEIGTRHMQEF 191
Query: 153 IIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVK 212
I + +AI+FI+++ +S ++++R + R+ +++++
Sbjct: 192 I----SGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNHRK---ETKKVIG 244
Query: 213 AMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCP 271
+P + + + CA+C+E++ V + +RILPC+H FH C+D WL RT CP
Sbjct: 245 QLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRT-CP 303
Query: 272 VCKRD---ARTSTGEPPASESTPLLSSSPASSSI 302
+CK D A G+P ++ P ++P S+
Sbjct: 304 MCKLDVIKALGYWGDPEDTQELPTPEAAPGRVSV 337
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 84 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G+++
Sbjct: 123 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 179
Query: 141 KQY------------AGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRH 188
G+ +++ ++ ++ ++ISFI L+ +S ++++R
Sbjct: 180 VSLLERNITVTMYITIGTRNLQKYV----SRTSVVFVSISFIVLMIISLAWLVFYYIQRF 235
Query: 189 RIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRIL 248
R R R R + + K I E CA+C+E Y + +RIL
Sbjct: 236 RYANARDRNQR-RLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRIL 294
Query: 249 PCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSS-------PASSS 301
PCRH FH CVD WL RT CP+CK + + G PP ++ L + P ++
Sbjct: 295 PCRHLFHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQ 353
Query: 302 ILSSIRSSLASSSALHIPPSMSHSPSVSHIHSVASTPYIPQS 343
I + +++ SS + + P++ +V + V T IPQ
Sbjct: 354 ITGASDTTVNESS-VTLDPAVR---TVGALQVVQDTDPIPQE 391
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 84 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G+++
Sbjct: 122 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 178
Query: 141 KQY------------AGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRH 188
G+ +++ ++ ++ ++ISFI L+ +S ++++R
Sbjct: 179 VSLLERNITVTMYITIGTRNLQKYV----SRTSVVFVSISFIVLMIISLAWLVFYYIQRF 234
Query: 189 RIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRIL 248
R R R R + + K I E CA+C+E Y + +RIL
Sbjct: 235 RYANARDRNQR-RLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRIL 293
Query: 249 PCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 288
PCRH FH CVD WL RT CP+CK + + G PP ++
Sbjct: 294 PCRHLFHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNAD 332
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEK- 139
L RGGC+F+DKV A + A ++Y+ E G + ++ I + +S G +
Sbjct: 112 LVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREI 171
Query: 140 --LKQYAGSTDMEIWI----IPSF-ENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 192
L Q M I + + F + +AI+FI+++ +S ++++R
Sbjct: 172 LELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTG 231
Query: 193 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGEKLRIL 248
+ G + H + K + L+ V + + CA+C+E++ V + +RIL
Sbjct: 232 ----SQIGSQSH--RKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRIL 285
Query: 249 PCRHKFHAFCVDSWLTSWRTFCPVCKRD---ARTSTGEPPASESTPLLSSSPA 298
PC+H FH C+D WL RT CP+CK D A GEP + P S P
Sbjct: 286 PCKHIFHRICIDPWLLDHRT-CPMCKLDVIKALGYWGEPGDVQEMPAPESPPG 337
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFV 185
+ G+ + Y S M I + +P +F + ++ISFI L+ +S+ +F+
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 186 RRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 245
++ R R R R + + K + E + CA+C+E Y + +
Sbjct: 219 QKIRYTNARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVV 277
Query: 246 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 285
RILPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 278 RILPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 41/225 (18%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-VLVAMAGNSAGIKIHAVFVSKASGEK 139
L RGGC+F++KV NA G A ++Y+ G V+M+ G + + VS G +
Sbjct: 107 LVARGGCTFKEKVFNAANRGASAVVIYNEAKSGNATVSMSHLGTGNTV-VIMVSYPKGME 165
Query: 140 LKQ------------YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 187
+ + G+ ++ +I + +AI+FI+++ +S ++++R
Sbjct: 166 IMEPLRRDIPVKMVITVGTRHVQEFI----SGQSVVFVAIAFITMMIISLAWLIFYYIQR 221
Query: 188 ----------HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLE 237
R+E +A + H R+ K + A CA+C+E
Sbjct: 222 FLYTGAQCGNQSNRKETKKAISQLQLH----RVKKGEKGIDIDA--------ENCAVCIE 269
Query: 238 DYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
+Y + +RILPC+H FH C+D WL RT CP+CK D + G
Sbjct: 270 NYKTKDLVRILPCKHIFHRLCIDPWLIEHRT-CPMCKLDVIKALG 313
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFV 185
+ G+ + Y S M I + +P +F + ++ISFI L+ +S+ +F+
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 186 RRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 245
++ R R R R + + K + E + CA+C+E Y + +
Sbjct: 219 QKIRYTNARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVV 277
Query: 246 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 285
R+LPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 278 RVLPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFV 185
+ G+ + Y S M I + +P +F + ++ISFI L+ +S+ +F+
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 186 RRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 245
++ R R R R + + K + E + CA+C+E Y + +
Sbjct: 219 QKIRYTNARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVV 277
Query: 246 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 285
R+LPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 278 RVLPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 44/281 (15%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAG 120
N L RGGC+F K++ A + G I+Y+ G ++V M G
Sbjct: 97 NKEPWIALIERGGCAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIG 156
Query: 121 NSAGIKIHAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLA 180
N G++I + + K + G + IW+ F +SF+ + +
Sbjct: 157 NIKGMEILHL-IRKGVHVTVMVEVGRKHV-IWLNHYF---------VSFMIVTTATLAYF 205
Query: 181 TCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICL 236
T + +RR + R R + ++R L KA L + E N + +C IC
Sbjct: 206 TFYHIRRLWVAR-----IENRRWKRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICF 260
Query: 237 EDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG----EPPASESTPL 292
E Y E +RIL C+H FH C+D W+ + T CP+CK D + G ++S +
Sbjct: 261 EAYKPNEIVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALGIQMDIEDGTDSLQV 319
Query: 293 LSSSPASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHS 333
L S+ ++ S + + +PP+ + S V+H+
Sbjct: 320 LMSNELPGTL-----SPVEEETNYELPPART-SSKVTHVQE 354
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYD----NEDDGVLVAMAGNSAGIKIHAVFVSKAS 136
L RG C+++DK+R+A A ++++ N ++ + + G S + A+ + +
Sbjct: 108 LISRGNCTYKDKIRHAVGHNASAVVIFNVGSSNPNETITMPHQGIS---DVVAIMIPEPK 164
Query: 137 GEKLKQYA------------GSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFF 184
G +L G+ +++ ++ ++ ++ISFI L+ +S ++
Sbjct: 165 GRELVLLMERNITVHMHITIGTRNLQKYV----SRTSVVFVSISFIILMIISLAWLVFYY 220
Query: 185 VRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEK 244
++R R R R R + + + I E CA+C+E Y +
Sbjct: 221 IQRFRYANARDRNQR-RLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDV 279
Query: 245 LRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 288
+RILPCRH FH CVD WL RT CP+CK + + G ++E
Sbjct: 280 VRILPCRHLFHKCCVDPWLVDHRT-CPMCKMNILKALGLTSSAE 322
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 18/262 (6%)
Query: 25 IGNNVT--LSFDDIEANFAPAIRGSGDCGVLYVAEPLD--ACSNLTSKVEKVSNMSSAFV 80
+GN +T L + N +P R SG V+ + E + AC LT+ + S
Sbjct: 48 VGNEITSELGESGVFGNHSPLERVSG---VVALPEGWNQNACHPLTN-FSRPKQADSWLA 103
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
L RGGC+F K+ A + G I+Y+ + G V + I AV +S G ++
Sbjct: 104 LIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEI 163
Query: 141 KQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRA--S 198
S +++ E + +S + + + AT + + R PR S
Sbjct: 164 LH---SIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNS 220
Query: 199 RGREFHGMSRRLVKAMPSLIFTAVVEDN----CTSRTCAICLEDYSVGEKLRILPCRHKF 254
R + + KA+ L + E + C +C + Y + +RIL C+H F
Sbjct: 221 FTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFF 280
Query: 255 HAFCVDSWLTSWRTFCPVCKRD 276
H C+D WL + RT CP+CK D
Sbjct: 281 HKACIDPWLLAHRT-CPMCKCD 301
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAG 120
N L RGGC+F K++ A + G I+Y+ G ++V M G
Sbjct: 97 NKEPWIALIERGGCAFTQKIKVASENGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIG 156
Query: 121 NSAGIKIHAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLA 180
N G++I + + K + G + IW+ F +SF+ + +
Sbjct: 157 NVKGMEILHL-IRKGVHVTVMVEVGRKHV-IWLNHYF---------VSFMIVTTATLAYF 205
Query: 181 TCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNC----TSRTCAICL 236
T + +RR + R R + ++R L KA L + E + + +C IC
Sbjct: 206 TFYHIRRLWVAR-----IEDRRWKRLTRELKKAFGQLQVRILKEGDEEVSPNADSCVICF 260
Query: 237 EDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
E Y E +RIL C+H FH C+D W+ + T CP+CK D + G
Sbjct: 261 EAYKPNEIVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALG 305
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 22/240 (9%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYD----- 108
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLASERGASGAVIFNFPGTR 152
Query: 109 NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQ-YAGSTDMEIWIIPSFENSAW----S 163
NE ++ M+ AG I A+ + G K+ Q + + I ++ W S
Sbjct: 153 NE----VIPMSHPGAG-DIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYS 207
Query: 164 IMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLV-KAMPSLIFTAV 222
I +S + +A + F R+R ++ + R+ +++ + K +
Sbjct: 208 IFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQLRTLKQGD 267
Query: 223 VEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
E +CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 268 KEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALG 326
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 12/258 (4%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYDNEDDG 113
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTR 152
Query: 114 VLVAMAGNSAGIKIHAVFVSKASGEKLKQ-YAGSTDMEIWIIPSFENSAW----SIMAIS 168
V + + I A+ + G K+ Q + + I ++ W SI +S
Sbjct: 153 NEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVS 212
Query: 169 FISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNC 227
+ +A + F R+R ++ + R+ +++ + + + E
Sbjct: 213 VSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGP 272
Query: 228 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPAS 287
+CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALGIEVDV 331
Query: 288 ESTPLLSSSPASSSILSS 305
E + P S+ I +S
Sbjct: 332 EDGSVSLQVPVSNEISNS 349
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 25/255 (9%)
Query: 85 GGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYA 144
GGC+F +K+ A + G A +VY+N D + M+ + + + E +
Sbjct: 108 GGCTFTEKINRAAERGARAVVVYNNGIDNEVFEMSHPGTKDTVAIMIGNLKGNEIVDLIK 167
Query: 145 GSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFF--VRRHRIRREAPRAS 198
G + + I ++ +W SI +S + +A + F RR R+ R +
Sbjct: 168 GGMQVTMVIEVGRKHGSWINHYSIFFVSVSFFIVTAATVGYFIFYSARRWRLTRAQNKKQ 227
Query: 199 RGREFHGMSRRLVKAMPSLIFTAVVEDNCT----SRTCAICLEDYSVGEKLRILPCRHKF 254
+ + KA+ L + + + +CA+C+E Y + +RIL C H F
Sbjct: 228 KR-----LKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFF 282
Query: 255 HAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSSIRSSLASSS 314
H C+D WL RT CP+CK D S G E +S + S+ S L S+
Sbjct: 283 HKNCIDPWLLEHRT-CPMCKCDILKSLGIAEDEEE--------GTSVAIPSVSSELQRST 333
Query: 315 ALHIPPSMSHSPSVS 329
+ I +HS + S
Sbjct: 334 -VQITEEENHSETAS 347
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 10/257 (3%)
Query: 25 IGNNVT--LSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLT 82
+GN + L + N +P R SG VL +ACS LT+ + + L
Sbjct: 61 VGNRIISELGESGVFGNHSPLERVSGAV-VLPEGWNQNACSPLTN-FSRPDQTDTWLALI 118
Query: 83 IRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASG-EKLK 141
RGGC+F K+ A + G I+Y+ G V + I AV + G E L
Sbjct: 119 ERGGCTFTHKINLAAEKGANGVIIYNYPGTGNKVFPMSHQGTENIVAVMIGNLKGMELLH 178
Query: 142 QYAGSTDMEIWIIPSFENSAW-SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRG 200
+ I I + W S +S + LA + + R R+ + R R
Sbjct: 179 LIQQGVYVTIIIEVGRMHMPWLSHYVMSLFTFLAATVTYLFLYCAWRPRVSNSSTR--RQ 236
Query: 201 REFHGMSRRLVKAMPSLIFT-AVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCV 259
R+ ++ + + + E + +C +C + Y + +RIL C+H FH C+
Sbjct: 237 RQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKTCI 296
Query: 260 DSWLTSWRTFCPVCKRD 276
D WL + RT CP+CK D
Sbjct: 297 DPWLLAHRT-CPMCKCD 312
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYD----- 108
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTR 152
Query: 109 NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQ-YAGSTDMEIWIIPSFENSAW----S 163
NE ++ M+ AG I A+ + G K+ Q + + I ++ W S
Sbjct: 153 NE----VIPMSHPGAG-DIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYS 207
Query: 164 IMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFTAV 222
I +S + +A + F R+R ++ + R+ +++ + + +
Sbjct: 208 IFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGD 267
Query: 223 VEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
E +CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 268 REIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALG 326
Query: 283 EPPASESTPLLSSSPASSSILSS 305
E + P S+ I +S
Sbjct: 327 IEVDVEDGSVSLQVPVSNEISNS 349
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 79 FVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG------VLVAMAGNSAGIKIHAVFV 132
F+L RG C++ DK AQ+ GF+ IV DN ++ + + + I ++FV
Sbjct: 144 FLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFV 203
Query: 133 SKAS------------GEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLA 180
S +S + LK YA ++ P + SI+ + + LA+ +
Sbjct: 204 STSSYNLLWSDLLHSYRQPLKLYAKPEELGDMFWPFLLCFSPSIIMLITVQALAIRKFIR 263
Query: 181 TCFFVRRHRIRR---EAPRASRGRE-FHGMSRRLVKAMPSLIFTAVVEDNCTSRT----C 232
T + + + RR + P + RE F+ + + + +++++ T C
Sbjct: 264 T--YRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVEC 321
Query: 233 AICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVC 273
ICLE ++ G+K+ LPC+H+FH C+ W+ +R CP C
Sbjct: 322 VICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTC 362
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 112/284 (39%), Gaps = 45/284 (15%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 127
L RGGC+F K++ A + G I+Y+ G V+V M GN G +I
Sbjct: 104 LIERGGCTFTQKIKVAAEKGASGVIIYNFPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEI 163
Query: 128 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 187
+ + K G + IW+ + +SF+ + +A LA F
Sbjct: 164 FHL-IKKGVLITAMVEVGRKHI-IWM---------NHYLVSFV--IVTTATLAYFIFYHI 210
Query: 188 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGE 243
HR+ + R + ++ L A L V E N +C IC E Y +
Sbjct: 211 HRL---CLARIQNRRWQRLTTDLQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPND 267
Query: 244 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----EPPASESTPLLSS--- 295
+RIL C+H FH C+D W+ S T CP+CK D G E L+SS
Sbjct: 268 IVRILTCKHFFHKNCIDPWILSHGT-CPICKCDILKVLGIQVDVENGTEPLQVLMSSELC 326
Query: 296 ---SPASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHSVAS 336
SP+ + + + S +H+ + + + S HSV
Sbjct: 327 ETLSPSEEETNNEVSPAGTSDKVIHVEENPTSQNNDSQPHSVVE 370
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 85 GGCSFEDKVRNAQKAGFEAAIVYD-----NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK 139
GGC+F DK+ A + G A++++ NE ++ M+ AG I A+ + G K
Sbjct: 127 GGCTFADKIHLAYERGASGAVIFNFPGTRNE----VIPMSHPGAG-DIVAIMIGNLKGTK 181
Query: 140 LKQ-YAGSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREA 194
+ Q + + I ++ W SI +S + +A + F R+R
Sbjct: 182 ILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNAR 241
Query: 195 PRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHK 253
++ + R+ +++ + + E +CA+C+E Y + +RIL C H
Sbjct: 242 AQSRKQRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHV 301
Query: 254 FHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
FH CVD WL RT CP+CK D + G
Sbjct: 302 FHKTCVDPWLLEHRT-CPMCKCDILKALG 329
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 42/228 (18%)
Query: 76 SSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNS 122
+ L RGGC+F K++ A + G I+Y+ G V+V M GN
Sbjct: 99 ETWLALIERGGCTFTQKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNL 158
Query: 123 AGIKIHAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATC 182
G +I + + K G + IW+ + +SF+ + +A LA
Sbjct: 159 KGTEIFHL-IKKGVLITAVVEVGRKHI-IWM---------NHYLVSFV--IVTTATLAYF 205
Query: 183 FFVRRHRI---RREAPRASR-----GREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAI 234
F HR+ R + R R F + R+VK E N +C I
Sbjct: 206 IFYHIHRLCLARIQNRRWQRLTTDLQNTFGQLQLRVVKEGDE-------EINPNGDSCVI 258
Query: 235 CLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 282
C E Y + +RIL C+H FH C+D W+ T CP+CK D G
Sbjct: 259 CFERYKPNDIVRILTCKHFFHKNCIDPWILPHGT-CPICKCDILKVLG 305
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 160 SAWSIMAIS----FISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 215
SA SI+AI FISL +S L F+ R I R G+ + ++++ P
Sbjct: 47 SADSIIAIVVLAIFISLGMVSCCLHCIFY--REEIGAAGQDVLHSRARRGLEKEVIESFP 104
Query: 216 SLIFTAV--VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPV 272
+ +++ V ++ CAICL ++ E LR +P C H FHA C+D WL+SW T CPV
Sbjct: 105 TFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWST-CPV 163
Query: 273 CKRDARTSTGE 283
C+ + GE
Sbjct: 164 CRANLSLKPGE 174
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 160 SAWSIM---AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPS 216
AW M +S+ LLA+ ++ T E G+S + ++PS
Sbjct: 233 DAWDEMDPDELSYEELLALGDIVGT--------------------ESRGLSADTIASLPS 272
Query: 217 LIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD 276
+ N T+ +C IC DY E L +LPC+H +H+ C+++WL CPVC +
Sbjct: 273 KRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWL-KINKVCPVCSAE 331
Query: 277 ARTST 281
TST
Sbjct: 332 VSTST 336
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 205 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 263
G+++ ++ +PS F +E++ + +T C +C D+ + LR+LPC H+FHA CVD WL
Sbjct: 370 GLTKADIEQLPSYRFN--LENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL 427
Query: 264 TSWRTFCPVCKRDA 277
+ RT CP+C+ DA
Sbjct: 428 KTNRT-CPICRADA 440
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 163 SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAV 222
S + + I + ++AV+ C ++RR ++P ++G + ++ ++++P FTA
Sbjct: 33 SALLCALICVAGLAAVV-RCAWLRRFTAGGDSPSPNKG-----LKKKALQSLPRSTFTAA 86
Query: 223 ------VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKR 275
+ S CAICL D++ GE++R+LP C H FH C+D WL S R+ CP C+R
Sbjct: 87 ESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVS-RSSCPSCRR 145
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 8/242 (3%)
Query: 38 ANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGCSFEDKVRNAQ 97
N +P R SG VL +AC+ +T+ + L RGGC+F K+ A
Sbjct: 63 GNHSPLERVSGVV-VLPEGWNQNACNPMTN-FSRPGQTDPWLALIERGGCTFTRKINVAA 120
Query: 98 KAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASG-EKLKQYAGSTDMEIWIIPS 156
+ G I+Y+ G V + I AV + G E L ++I I
Sbjct: 121 EKGANGVIIYNYPGTGNKVFPMSHQGTENIVAVMIGNLKGMELLHLIQKGVYVKIIIEVG 180
Query: 157 FENSAW-SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLV-KAM 214
+ W S +S + L +A +A F R R R R+ R+ + K
Sbjct: 181 RMHMPWLSHYIMSLFTFL--TATVAYLFLYCAWRPRGPNFSTRRQRQLKADVRKAIGKLQ 238
Query: 215 PSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCK 274
++ E C +C + Y + +RIL C+H FH C+D WL + RT CP+CK
Sbjct: 239 LRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIFHKACIDPWLLAHRT-CPMCK 297
Query: 275 RD 276
D
Sbjct: 298 CD 299
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 205 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 263
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 272 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 329
Query: 264 TSWRTFCPVCKRDA 277
+ RT CP+C+ DA
Sbjct: 330 KANRT-CPICRADA 342
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 205 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 263
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 329 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 386
Query: 264 TSWRTFCPVCKRDA 277
+ RT CP+C+ DA
Sbjct: 387 KANRT-CPICRADA 399
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 208 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 267
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 561 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL-SEN 619
Query: 268 TFCPVCKR 275
+ CP+C+R
Sbjct: 620 STCPICRR 627
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGST 147
S K R A + G +A+++D +D G+ V + EKL ++
Sbjct: 121 SLASKARMAGERG-ASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKN 179
Query: 148 DMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMS 207
I E AW + + + + + V R R R PR SR +
Sbjct: 180 QKAHVRIELKEPPAWPDYDVWILMTVVGTIFVIILASVLRIRCR---PRHSRPDPLQQRT 236
Query: 208 RRLVKAMPSLIFTAVVED----------NCTS-RTCAICLEDYSVGEKLRILPCRHKFHA 256
+ + + + A +C+S CAICLE++S G++LR++ C H+FH
Sbjct: 237 AWAISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHR 296
Query: 257 FCVDSWLTSWRTFCPVC 273
CVD WL RT CP+C
Sbjct: 297 NCVDPWLHQHRT-CPLC 312
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 208 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 267
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 544 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 602
Query: 268 TFCPVCKR 275
+ CP+C+R
Sbjct: 603 STCPICRR 610
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 208 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 267
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 679 RGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 737
Query: 268 TFCPVCKR 275
+ CP+C+R
Sbjct: 738 STCPICRR 745
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 92 KVRNAQKAGFEAAIVYDNEDDGVLVAM-AGNSAGIKIHAVFVSKASGEKLKQYAGSTDM- 149
K + A + G A I +E+ + + G+ +K V+V A KL +
Sbjct: 139 KAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVA 198
Query: 150 --EIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMS 207
I +P + + + M I F++ + +++ V+ +R R + M+
Sbjct: 199 RARIQHLPPRQPTEYFDMGI-FLAFFVVVSLVCLILLVKIKLKQR--------RSQNSMN 249
Query: 208 RRLVKAMPSLIF-------TAVVEDNC---------TSRTCAICLEDYSVGEKLRILPCR 251
R V+A+ + E +C ++ CAICLE Y GE+LR++PC
Sbjct: 250 RLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRVIPCT 309
Query: 252 HKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 286
H+FH CVD WL T CP C+ + G P A
Sbjct: 310 HRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPGA 343
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 205 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 263
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 437 GLTKADIEQLPSYRFNP--NNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 494
Query: 264 TSWRTFCPVCKRDA 277
+ RT CP+C+ DA
Sbjct: 495 KANRT-CPICRADA 507
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 205 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 263
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 440 GLTKADIEQLPSYRFNP--SNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 497
Query: 264 TSWRTFCPVCKRDA 277
RT CP+C+ DA
Sbjct: 498 KGNRT-CPICRADA 510
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 225 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 275
+N +TC++C+ +Y+ G KLR LPC H++H C+D WL+ T CP+C+R
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST-CPICRR 612
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 203 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 262
G+++ + + + + D+ + C++C+ DY G KLR LPC H+FH C+D W
Sbjct: 585 IRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRW 644
Query: 263 LTSWRTFCPVCKR 275
L S CPVC+R
Sbjct: 645 L-SENCTCPVCRR 656
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 225 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 275
+N +TC++C+ +Y+ G KLR LPC H++H C+D WL+ T CP+C+R
Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST-CPICRR 588
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,474,906
Number of Sequences: 539616
Number of extensions: 5950096
Number of successful extensions: 27170
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 646
Number of HSP's that attempted gapping in prelim test: 23425
Number of HSP's gapped (non-prelim): 2772
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)