Query 013395
Match_columns 444
No_of_seqs 190 out of 1644
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 03:25:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013395.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013395hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 7.5E-61 1.6E-65 484.8 45.1 393 47-439 84-476 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 1.2E-58 2.6E-63 466.1 47.8 387 51-440 38-424 (437)
3 PRK08588 succinyl-diaminopimel 100.0 1.1E-53 2.4E-58 425.9 38.9 358 60-437 2-376 (377)
4 PRK06915 acetylornithine deace 100.0 2.3E-53 5E-58 429.6 38.7 376 44-441 3-422 (422)
5 COG1473 AbgB Metal-dependent a 100.0 1.1E-51 2.4E-56 402.7 43.2 377 58-439 10-391 (392)
6 TIGR01891 amidohydrolases amid 100.0 8.9E-51 1.9E-55 402.6 40.0 356 63-422 2-360 (363)
7 PRK13013 succinyl-diaminopimel 100.0 8.3E-51 1.8E-55 411.8 39.8 361 58-439 12-424 (427)
8 PRK06837 acetylornithine deace 100.0 5.4E-51 1.2E-55 412.2 37.5 373 45-440 7-425 (427)
9 PRK06133 glutamate carboxypept 100.0 2.2E-50 4.7E-55 405.6 40.1 358 58-440 35-410 (410)
10 PRK13983 diaminopimelate amino 100.0 2E-50 4.2E-55 405.9 35.6 362 58-435 3-399 (400)
11 PRK13009 succinyl-diaminopimel 100.0 1E-49 2.3E-54 397.1 37.9 355 61-438 3-375 (375)
12 PRK07338 hypothetical protein; 100.0 2E-49 4.4E-54 398.5 39.8 357 58-439 15-400 (402)
13 TIGR01910 DapE-ArgE acetylorni 100.0 1.6E-50 3.4E-55 402.9 29.3 348 64-428 2-375 (375)
14 PRK08596 acetylornithine deace 100.0 2.7E-49 5.9E-54 399.1 36.9 364 58-441 11-420 (421)
15 PRK13004 peptidase; Reviewed 100.0 3E-49 6.6E-54 396.4 36.4 362 58-440 13-399 (399)
16 PRK06446 hypothetical protein; 100.0 2.6E-49 5.7E-54 400.8 35.4 363 60-437 2-434 (436)
17 TIGR01246 dapE_proteo succinyl 100.0 4.2E-49 9.2E-54 391.9 35.6 352 63-436 2-370 (370)
18 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.4E-48 3.1E-53 391.9 36.0 364 59-437 8-398 (400)
19 PRK08262 hypothetical protein; 100.0 9.4E-49 2E-53 402.3 33.0 368 58-438 42-485 (486)
20 TIGR03320 ygeY M20/DapE family 100.0 3.9E-48 8.5E-53 388.0 36.2 358 58-438 11-395 (395)
21 PRK07522 acetylornithine deace 100.0 2.2E-48 4.8E-53 388.9 34.1 349 60-437 4-384 (385)
22 PRK08651 succinyl-diaminopimel 100.0 3.6E-48 7.8E-53 388.6 35.6 355 58-438 4-392 (394)
23 TIGR03526 selenium_YgeY putati 100.0 4.3E-48 9.2E-53 387.6 36.0 358 58-438 11-395 (395)
24 PRK09133 hypothetical protein; 100.0 5.2E-48 1.1E-52 395.4 36.4 360 59-438 36-470 (472)
25 PRK05111 acetylornithine deace 100.0 7.7E-48 1.7E-52 384.7 36.0 348 60-438 5-382 (383)
26 PRK08201 hypothetical protein; 100.0 7.8E-48 1.7E-52 392.6 36.1 365 58-437 12-454 (456)
27 PRK07907 hypothetical protein; 100.0 1.8E-47 4E-52 388.9 38.7 362 58-437 16-447 (449)
28 TIGR01892 AcOrn-deacetyl acety 100.0 3.7E-48 8.1E-53 384.5 32.6 339 65-432 2-363 (364)
29 PRK09104 hypothetical protein; 100.0 1.1E-46 2.3E-51 384.9 37.2 365 58-437 15-462 (464)
30 PRK00466 acetyl-lysine deacety 100.0 1.4E-46 2.9E-51 370.3 36.1 334 58-439 8-345 (346)
31 PRK07473 carboxypeptidase; Pro 100.0 4.4E-46 9.5E-51 369.8 38.0 348 59-436 10-375 (376)
32 PRK08652 acetylornithine deace 100.0 1.5E-46 3.2E-51 370.7 34.2 338 60-438 2-346 (347)
33 PRK07906 hypothetical protein; 100.0 8.8E-47 1.9E-51 381.9 31.6 357 63-436 2-426 (426)
34 PRK07079 hypothetical protein; 100.0 3.9E-45 8.5E-50 373.7 38.6 362 60-439 17-457 (469)
35 TIGR01883 PepT-like peptidase 100.0 1.8E-45 3.9E-50 364.7 33.9 340 62-433 2-360 (361)
36 PRK13007 succinyl-diaminopimel 100.0 2.9E-45 6.3E-50 362.1 35.1 335 58-433 5-351 (352)
37 PRK04443 acetyl-lysine deacety 100.0 4E-45 8.7E-50 360.0 35.1 335 59-436 5-348 (348)
38 PRK13381 peptidase T; Provisio 100.0 3.5E-45 7.5E-50 367.6 34.9 349 62-437 3-403 (404)
39 TIGR01886 dipeptidase dipeptid 100.0 3.7E-45 8E-50 372.4 34.7 351 58-438 11-466 (466)
40 TIGR01900 dapE-gram_pos succin 100.0 2.9E-45 6.4E-50 363.7 33.2 331 65-418 1-373 (373)
41 PRK08737 acetylornithine deace 100.0 6.7E-45 1.4E-49 359.3 34.3 336 58-434 4-362 (364)
42 COG0624 ArgE Acetylornithine d 100.0 1.5E-44 3.3E-49 363.8 36.7 365 58-438 11-408 (409)
43 PRK05469 peptidase T; Provisio 100.0 5.8E-44 1.3E-48 359.2 34.5 354 60-439 2-407 (408)
44 PRK07205 hypothetical protein; 100.0 1E-43 2.2E-48 361.0 36.3 355 58-439 9-444 (444)
45 PRK12892 allantoate amidohydro 100.0 5.7E-43 1.2E-47 352.8 38.9 346 60-438 10-411 (412)
46 PRK07318 dipeptidase PepV; Rev 100.0 9E-44 1.9E-48 363.1 31.1 352 58-438 12-466 (466)
47 TIGR01882 peptidase-T peptidas 100.0 2.5E-43 5.4E-48 354.2 33.6 351 60-437 3-407 (410)
48 PRK12893 allantoate amidohydro 100.0 1.4E-42 3.1E-47 349.8 38.6 347 60-439 10-411 (412)
49 KOG2275 Aminoacylase ACY1 and 100.0 3.6E-43 7.7E-48 331.9 31.7 359 62-437 27-418 (420)
50 TIGR01902 dapE-lys-deAc N-acet 100.0 3.6E-43 7.8E-48 344.7 31.5 329 65-439 2-336 (336)
51 PRK09290 allantoate amidohydro 100.0 1.5E-42 3.3E-47 349.3 36.9 347 60-439 7-412 (413)
52 PRK06156 hypothetical protein; 100.0 1.7E-42 3.6E-47 357.2 37.0 359 57-439 43-517 (520)
53 PRK12891 allantoate amidohydro 100.0 1.4E-41 3E-46 342.1 39.7 336 73-441 33-413 (414)
54 PRK12890 allantoate amidohydro 100.0 1.2E-40 2.6E-45 335.7 39.9 335 70-437 28-411 (414)
55 TIGR01893 aa-his-dipept aminoa 100.0 9.3E-41 2E-45 341.7 36.4 346 60-436 4-476 (477)
56 PRK15026 aminoacyl-histidine d 100.0 2.8E-40 6.1E-45 335.7 35.5 344 59-436 9-482 (485)
57 TIGR01887 dipeptidaselike dipe 100.0 2.3E-40 5.1E-45 334.6 33.0 345 60-433 2-447 (447)
58 TIGR01879 hydantase amidase, h 100.0 1.7E-39 3.6E-44 325.9 34.9 330 73-435 24-400 (401)
59 PRK08554 peptidase; Reviewed 100.0 4.1E-39 8.8E-44 325.0 32.4 356 61-438 2-438 (438)
60 TIGR03176 AllC allantoate amid 100.0 4E-38 8.6E-43 315.3 38.7 328 75-439 28-405 (406)
61 KOG2276 Metalloexopeptidases [ 100.0 6.6E-39 1.4E-43 299.6 28.9 364 58-437 14-471 (473)
62 PRK13799 unknown domain/N-carb 100.0 2.8E-37 6E-42 321.3 40.5 349 55-438 176-590 (591)
63 PRK13590 putative bifunctional 100.0 3.1E-37 6.7E-42 321.3 39.1 348 56-440 177-590 (591)
64 COG2195 PepD Di- and tripeptid 99.9 5.8E-24 1.3E-28 208.0 19.8 351 59-437 4-412 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 2E-22 4.3E-27 181.1 11.6 176 119-435 1-189 (189)
66 COG4187 RocB Arginine degradat 99.8 2.5E-17 5.4E-22 156.6 16.8 259 60-322 8-322 (553)
67 PF07687 M20_dimer: Peptidase 99.7 1.6E-16 3.4E-21 129.9 11.2 103 226-328 3-110 (111)
68 PRK10199 alkaline phosphatase 99.7 3E-15 6.4E-20 143.4 16.5 123 68-195 43-188 (346)
69 TIGR03106 trio_M42_hydro hydro 99.6 2.1E-13 4.5E-18 132.7 23.8 129 60-189 3-223 (343)
70 PRK09961 exoaminopeptidase; Pr 99.5 2.5E-13 5.4E-18 132.5 18.5 248 64-436 4-333 (344)
71 COG1363 FrvX Cellulase M and r 99.4 4.9E-11 1.1E-15 114.8 22.2 142 60-207 2-234 (355)
72 TIGR03107 glu_aminopep glutamy 99.3 7.8E-11 1.7E-15 114.7 14.6 316 64-436 2-341 (350)
73 PRK09864 putative peptidase; P 99.1 2E-09 4.3E-14 104.8 13.9 320 64-436 4-341 (356)
74 KOG2194 Aminopeptidases of the 98.4 2.6E-06 5.7E-11 89.4 12.7 90 103-207 128-223 (834)
75 PF04389 Peptidase_M28: Peptid 98.3 1.7E-06 3.6E-11 76.9 7.3 81 117-208 2-88 (179)
76 PF05343 Peptidase_M42: M42 gl 97.4 0.00053 1.1E-08 65.6 8.6 59 144-207 127-188 (292)
77 KOG2526 Predicted aminopeptida 97.1 0.0095 2E-07 58.0 12.8 95 103-208 193-304 (555)
78 COG2234 Iap Predicted aminopep 96.8 0.0044 9.5E-08 63.1 8.2 45 151-197 230-275 (435)
79 KOG3946 Glutaminyl cyclase [Po 96.5 0.042 9.1E-07 50.8 11.6 126 58-195 49-200 (338)
80 KOG2195 Transferrin receptor a 96.3 0.011 2.4E-07 62.6 7.7 76 103-195 338-420 (702)
81 PF05450 Nicastrin: Nicastrin; 95.9 0.039 8.5E-07 50.9 8.5 67 116-195 1-74 (234)
82 TIGR03107 glu_aminopep glutamy 95.4 0.032 7E-07 54.7 6.1 64 142-210 169-235 (350)
83 PRK09864 putative peptidase; P 94.7 0.051 1.1E-06 53.4 5.5 61 142-209 166-229 (356)
84 PRK00913 multifunctional amino 94.3 0.93 2E-05 46.4 13.5 128 57-188 168-313 (483)
85 cd00433 Peptidase_M17 Cytosol 93.9 1.8 3.8E-05 44.4 14.6 124 57-184 151-295 (468)
86 PF00883 Peptidase_M17: Cytoso 93.2 1.6 3.5E-05 41.8 12.2 111 64-184 2-140 (311)
87 KOG2597 Predicted aminopeptida 91.4 2.3 5E-05 43.3 11.2 129 58-188 187-334 (513)
88 PTZ00412 leucyl aminopeptidase 91.0 3.9 8.4E-05 42.2 12.4 125 57-188 209-358 (569)
89 PRK05015 aminopeptidase B; Pro 88.5 9 0.00019 38.3 12.6 122 60-188 100-250 (424)
90 PF05343 Peptidase_M42: M42 gl 86.7 0.37 8E-06 46.2 1.8 70 349-428 220-292 (292)
91 COG0260 PepB Leucyl aminopepti 84.6 26 0.00057 35.9 13.8 122 57-185 164-309 (485)
92 COG4882 Predicted aminopeptida 82.6 25 0.00055 34.2 11.9 71 104-195 179-259 (486)
93 KOG3566 Glycosylphosphatidylin 82.3 35 0.00077 35.4 13.5 90 84-195 92-193 (617)
94 PTZ00371 aspartyl aminopeptida 78.6 4.4 9.6E-05 41.5 6.0 81 349-438 372-457 (465)
95 PRK02256 putative aminopeptida 73.3 4 8.6E-05 41.7 4.0 76 350-434 380-460 (462)
96 PRK02813 putative aminopeptida 70.9 5.7 0.00012 40.3 4.4 76 350-434 346-426 (428)
97 PRK02256 putative aminopeptida 63.0 12 0.00027 38.2 5.0 42 142-187 251-294 (462)
98 PF04114 Gaa1: Gaa1-like, GPI 58.6 29 0.00063 36.0 7.0 73 103-196 3-78 (504)
99 PRK15026 aminoacyl-histidine d 46.7 69 0.0015 33.2 7.5 42 277-324 344-385 (485)
100 PRK06156 hypothetical protein; 43.5 1.3E+02 0.0027 31.5 9.0 24 278-301 240-263 (520)
101 PF09940 DUF2172: Domain of un 38.4 1.2E+02 0.0025 30.1 7.0 68 106-195 118-187 (386)
102 PRK02813 putative aminopeptida 33.9 1.3E+02 0.0028 30.6 6.9 50 78-127 20-88 (428)
103 cd06406 PB1_P67 A PB1 domain i 33.0 2.1E+02 0.0046 21.5 6.2 59 296-359 8-66 (80)
104 PTZ00371 aspartyl aminopeptida 28.4 2.2E+02 0.0048 29.3 7.6 51 77-127 20-90 (465)
105 PF14133 DUF4300: Domain of un 26.1 3E+02 0.0066 25.7 7.4 57 69-127 135-192 (250)
106 PF01221 Dynein_light: Dynein 23.4 1.6E+02 0.0034 22.4 4.3 37 58-97 17-54 (89)
107 TIGR01887 dipeptidaselike dipe 23.3 1.4E+02 0.0031 30.4 5.2 24 282-305 194-217 (447)
108 COG1362 LAP4 Aspartyl aminopep 23.1 2E+02 0.0043 29.0 5.8 77 350-435 354-435 (437)
109 PF06675 DUF1177: Protein of u 22.7 1.2E+02 0.0025 28.2 3.9 85 114-208 30-129 (276)
110 cd06411 PB1_p51 The PB1 domain 22.7 3.3E+02 0.0073 20.4 5.6 32 296-327 4-35 (78)
111 COG2195 PepD Di- and tripeptid 21.8 1.1E+02 0.0023 31.0 3.8 68 116-190 62-139 (414)
112 COG4635 HemG Flavodoxin [Energ 20.6 65 0.0014 27.7 1.7 33 69-101 4-36 (175)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=7.5e-61 Score=484.76 Aligned_cols=393 Identities=59% Similarity=1.001 Sum_probs=346.1
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCc
Q 013395 47 SRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDA 126 (444)
Q Consensus 47 ~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~ 126 (444)
+.+.-+...++..++++++.+.++++|+++++|.++++||+++|+++|++++.....+|++++++++++|+|+|.||+|+
T Consensus 84 ~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~Da 163 (478)
T PLN02280 84 EAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDA 163 (478)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCC
Confidence 34444455567889999999999999999999999999999999999999887667889999996444589999999999
Q ss_pred cCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhcccccccceeEE
Q 013395 127 LPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFG 206 (444)
Q Consensus 127 vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~ 206 (444)
||+++..+|+++|+++|++||||+|++++++++|+++|++.+.+++++|.|+|++|||.|.|++.+++++.+++.|++++
T Consensus 164 VP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~ 243 (478)
T PLN02280 164 LPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFA 243 (478)
T ss_pred CcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEE
Confidence 99988778999999999999999999999999999999988878899999999999999889999999998888899999
Q ss_pred ecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeec
Q 013395 207 LHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING 286 (444)
Q Consensus 207 ~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~g 286 (444)
+|..+.+|.+.++.+.+...+|..+++|+++|+++|++.|+.|+||+..+++++..++++..+..++....+++++.|+|
T Consensus 244 ~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~G 323 (478)
T PLN02280 244 VHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDG 323 (478)
T ss_pred EecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEc
Confidence 99877778888888878788899999999999999999999999999999999999998865555555667999999999
Q ss_pred CcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHh
Q 013395 287 GSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL 366 (444)
Q Consensus 287 G~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 366 (444)
|.+.|+||++|++.+|+|+.+..+.+++.++|+++++..+..+++++++++.......++++.+++++++.+++++.+.+
T Consensus 324 G~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~ 403 (478)
T PLN02280 324 GNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLL 403 (478)
T ss_pred cCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999888888887777532122457888889999999999998877
Q ss_pred CCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 367 GEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 367 g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
|.+.+......+|++|+++|.+.+|++++++|+++.+||....+|+++|+++++++..++++|+.++.+++.+
T Consensus 404 G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 404 GPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred CccccccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8654322245789999999998899988888987766676678999999999999999999999999998863
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1.2e-58 Score=466.12 Aligned_cols=387 Identities=60% Similarity=0.992 Sum_probs=336.4
Q ss_pred hhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCc
Q 013395 51 ELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQ 130 (444)
Q Consensus 51 ~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~ 130 (444)
....+++..++++++.++++++|+.+++|.++++||+++|+++|++++.....+|+++.++++++|+|+|.||+|+||++
T Consensus 38 ~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~DaVp~~ 117 (437)
T PLN02693 38 ELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDALPIQ 117 (437)
T ss_pred HHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCCCcCC
Confidence 33443456688999999999999999999999999999999999998754467899999964456899999999999998
Q ss_pred CCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhcccccccceeEEeccc
Q 013395 131 ELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLV 210 (444)
Q Consensus 131 ~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~ 210 (444)
+..+|+++|..+|++||||||++++++++|+++|++.+..++++|.|+|++|||.+.|++.+++++.+++.|++++.|.+
T Consensus 118 e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~ 197 (437)
T PLN02693 118 EAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLS 197 (437)
T ss_pred CCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecC
Confidence 87789999999999999999999999999999999887778899999999999965799999999888778899998888
Q ss_pred CCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCccc
Q 013395 211 HKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSY 290 (444)
Q Consensus 211 ~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~ 290 (444)
+..+.|.+..+.|...+|..+++|+++|+++|+|.|+.|+|||..+++++..|++...+..++....+++++.++||.+.
T Consensus 198 p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~ 277 (437)
T PLN02693 198 PRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAF 277 (437)
T ss_pred CCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCC
Confidence 87778888788788788999999999999999999999999999999999999998655555566789999999999999
Q ss_pred ccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcc
Q 013395 291 NMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEEN 370 (444)
Q Consensus 291 nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~ 370 (444)
|+||++|++.+|+|+.++. +.+.++|+++++..+..+++++++++.....+++++..+|+++++.+++++++++|.+.
T Consensus 278 NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~ 355 (437)
T PLN02693 278 NVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEA 355 (437)
T ss_pred ceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999974 57999999999988888888887776421235677788889999999999999889775
Q ss_pred cccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 371 VKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 371 ~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
+......+|++|+++|.+.+|++++++|+++.. ......|+++++++.+.+..++++|+.++.+++...
T Consensus 356 ~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~-~~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~ 424 (437)
T PLN02693 356 FVEAAPEMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHATMAVQYLKEK 424 (437)
T ss_pred eeecCCCceechHHHHHHHhhhhEEEEecCCCC-CCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 432345679999999999999999999987422 112469999999999999999999999999998763
No 3
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.1e-53 Score=425.92 Aligned_cols=358 Identities=21% Similarity=0.302 Sum_probs=298.6
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc---CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCc
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP---VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~---~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~ 136 (444)
++.++++++++++||++++|.++++||.++|+++|++++.. ++++|++++++++ +|+|+|+||+||||+++.+.|+
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCc
Confidence 46678899999999999999999999999999999997643 3568999999544 4899999999999998777898
Q ss_pred ccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEec
Q 013395 137 HKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 137 ~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~ 208 (444)
++| ++||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.| .|++.++++++++++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 887 57899999996 899999999999999988888999999999999988 4999999988777788877653
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC---CCCCCcEEEEEEee
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI---DPLDSQVVSVAMIN 285 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~---~~~~~~t~~v~~i~ 285 (444)
+... ..+ ...+|..+++|+++|+++|+|.|+.|.|||..+++++..++++..+.. ...+..+++++.++
T Consensus 161 --p~~~-~i~-----~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 --PSGH-GIV-----YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred --CCCc-eeE-----EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 2221 112 123599999999999999999999999999999999999988643321 22456899999999
Q ss_pred cCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHH
Q 013395 286 GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTA 363 (444)
Q Consensus 286 gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~ 363 (444)
||...|+||++|++.+|+|+.|+++.+++.+.|++++++.+...++++++++.. .++++ +.++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYS----NHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEec----CCCCcCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988766666677777542 23333 346789999999999
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHHcCC-cEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDEIPG-SFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
+.+|.++. ....+|++|+++|....|+ ..+.+|++ +..++|++||+++++++.+++++|+.++.++|
T Consensus 309 ~~~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i~~Gpg-----~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 309 SYVGQDIP--LSAIPGATDASSFLKKKPDFPVIIFGPG-----NNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred HhhCCCCc--eecCCCcccHHHHhhhcCCCCEEEECCC-----CCccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 98887643 3567899999999864443 23456764 23569999999999999999999999998876
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.3e-53 Score=429.58 Aligned_cols=376 Identities=20% Similarity=0.253 Sum_probs=303.6
Q ss_pred hHHHHHHhhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--------------------CCC
Q 013395 44 SIKSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--------------------VAK 103 (444)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--------------------~~~ 103 (444)
.+++++...++. ..++++++++++++|||++++|.++++||+++|+++|++++.. ..+
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (422)
T PRK06915 3 QLKKQICDYIES--HEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDS 80 (422)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCC
Confidence 345556655543 4578999999999999999999999999999999999997521 246
Q ss_pred ceEEEEe-CCCCCcEEEEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceE
Q 013395 104 TGVVATV-GSGSPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTV 175 (444)
Q Consensus 104 ~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i 175 (444)
+||++++ +.+++|+|+|+||+||||+++.++|+++| ++||++||||+ |++++++|.|+++|++.+.+++++|
T Consensus 81 ~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v 160 (422)
T PRK06915 81 PNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDV 160 (422)
T ss_pred ceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 8999999 44456899999999999998888898877 46899999996 8999999999999999888889999
Q ss_pred EEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHH
Q 013395 176 VLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPIL 254 (444)
Q Consensus 176 ~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~ 254 (444)
.|+|++|||.|+ |+..++..++ +.|++++.+ |++. .....++|..+++|+++|+++|+|.|+.|+||+.
T Consensus 161 ~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~ 230 (422)
T PRK06915 161 IFQSVIEEESGGAGTLAAILRGY--KADGAIIPE-----PTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIE 230 (422)
T ss_pred EEEEecccccCCcchHHHHhcCc--CCCEEEECC-----CCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHH
Confidence 999999999875 8888877754 568877542 3221 1123456999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccc----CCCC-----CCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHH
Q 013395 255 AVSSSVISLQNIVSRE----IDPL-----DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQ 325 (444)
Q Consensus 255 ~~~~~l~~l~~~~~~~----~~~~-----~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 325 (444)
.+++++..|+++.... ..+. .+.|+|++.|+||...|+||+.|++.+|+|+.|..+.+++.+.|++++++.
T Consensus 231 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~ 310 (422)
T PRK06915 231 KSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAEL 310 (422)
T ss_pred HHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 9999999998775321 1111 135899999999999999999999999999999999999999999999876
Q ss_pred HHhh----CCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH--cCCcEEEecc
Q 013395 326 AAVH----RCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE--IPGSFLLLGM 399 (444)
Q Consensus 326 a~~~----~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~ 399 (444)
+... +..+++++......++ +++.|+++++.+++++++++|.++.. ...+|++|+++|.+. +|+++ +|+
T Consensus 311 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~~d~~lv~~l~~a~~~~~G~~~~~--~~~~g~tD~~~~~~~~giP~v~--fGp 385 (422)
T PRK06915 311 NDVDEWFVEHPVEVEWFGARWVPG-ELEENHPLMTTLEHNFVEIEGNKPII--EASPWGTDGGLLTQIAGVPTIV--FGP 385 (422)
T ss_pred hccChhhhcCCceEEeecccCCcc-cCCCCCHHHHHHHHHHHHHhCCCCee--ceeeeeccHHHHhccCCCCEEE--ECC
Confidence 5431 2334554431111222 34567889999999999988887643 467889999999885 88753 576
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhcC
Q 013395 400 LNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 400 ~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~~ 441 (444)
+ ....+|++||+++++++..++++|+.++.++|+.++
T Consensus 386 g-----~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~~ 422 (422)
T PRK06915 386 G-----ETKVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVKK 422 (422)
T ss_pred C-----CccccCCCCceeEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4 235799999999999999999999999999998653
No 5
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.1e-51 Score=402.73 Aligned_cols=377 Identities=47% Similarity=0.752 Sum_probs=344.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCC-CceEEEEeC-CCCCcEEEEEeccCccCCcCCCCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVA-KTGVVATVG-SGSPPFVALRADMDALPIQELVEW 135 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~-~~n~~~~~~-~~~~~~ill~~H~D~vp~~~~~~w 135 (444)
..+++++|.|+++++|+.+++|.++++||+++|+++|+++....+ .+++++.++ ++++|+|.|.+.||.+|..+.+++
T Consensus 10 ~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~ 89 (392)
T COG1473 10 LKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGL 89 (392)
T ss_pred hhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCC
Confidence 568999999999999999999999999999999999999544433 688999994 556689999999999999999999
Q ss_pred cccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhcccccc-cceeEEecccCCCC
Q 013395 136 EHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLEN-VEAIFGLHLVHKYP 214 (444)
Q Consensus 136 ~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~-~d~~~~~~~~~~~~ 214 (444)
+|.+..+|.+|+||++++.+++|.++.+|++...+++++|+|+|+++||.++|++.|+++|.+++ +|+++++|++++.|
T Consensus 90 ~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~ 169 (392)
T COG1473 90 PFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLP 169 (392)
T ss_pred CcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCC
Confidence 99999999999999999999999999999988778999999999999999989999999999999 99999999988878
Q ss_pred CceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCccccccc
Q 013395 215 TGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIP 294 (444)
Q Consensus 215 ~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP 294 (444)
.|.+..+.|...++...++|+++|+++|++.||.++||+.+++.++..|+.+.++..++.+..+++++.++||.+.|+||
T Consensus 170 ~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIp 249 (392)
T COG1473 170 VGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIP 249 (392)
T ss_pred CceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCC
Confidence 89999999988889999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred CcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccc--c
Q 013395 295 DSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENV--K 372 (444)
Q Consensus 295 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~--~ 372 (444)
+++++..++|.......+.+.++|+++++..|..+|+++++++. .++|++.+|+.+.+.+++++++..|...+ .
T Consensus 250 d~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~----~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
T COG1473 250 DSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYE----RGYPPVVNDPALTDLLAEAAEEVGGEEVVVVE 325 (392)
T ss_pred CeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEec----CCCCCccCCHHHHHHHHHHHHHhccccceecc
Confidence 99999999999999999999999999999999999999999986 78899999999999999999999874432 1
Q ss_pred cCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 373 LAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 373 ~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
....+.|++|+++|.+.+|..++++|..... +.....|.|...++...+..+++++..+++.++..
T Consensus 326 ~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 326 LPPSMAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred cCCCCCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 2234569999999999999999999986643 22345999999999999999999999999988764
No 6
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=8.9e-51 Score=402.63 Aligned_cols=356 Identities=46% Similarity=0.766 Sum_probs=297.4
Q ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceec-cCCCceEEEEeCC-CCCcEEEEEeccCccCCcCCCCCcccCc
Q 013395 63 KKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRW-PVAKTGVVATVGS-GSPPFVALRADMDALPIQELVEWEHKSK 140 (444)
Q Consensus 63 ~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~-~~~~~n~~~~~~~-~~~~~ill~~H~D~vp~~~~~~w~~~p~ 140 (444)
.+++++|++|||++++|.++++||+++|+++|++++. .....|+++++++ +++|+|+|+||+||||+++...+|+.+.
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 4678999999999999999999999999999999885 4467899999954 3568999999999999876444555556
Q ss_pred CCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeee
Q 013395 141 IDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVAS 220 (444)
Q Consensus 141 ~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~ 220 (444)
+||++||||+|+++++++.|++.|++.+..++++|.|+|++|||.+.|++++++++.+++.|.++++++.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999998777788999999999999988999999887777789999988766666666655
Q ss_pred ccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEE
Q 013395 221 RPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (444)
Q Consensus 221 ~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~ 300 (444)
..+...+|..+++|+++|+++|++.|+.|.||+..+++++.+++++..+........+++++.++||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66667789999999999999999999999999999999999998864332233445689999999999999999999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccc-cCCCCCc
Q 013395 301 GTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVK-LAPIFTG 379 (444)
Q Consensus 301 ~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~-~~~~~~g 379 (444)
+|+|+.+..+.+++.+.|++++++.+.+.+.+++++.. ..+|+...++++++.+++++++++|...+. .+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~----~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYD----RGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe----cCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 99999999999999999999999888788888888764 234445568889999999999987854321 1246899
Q ss_pred CcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCch
Q 013395 380 SEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVL 422 (444)
Q Consensus 380 ~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~ 422 (444)
++|++++++.+|++++++|....+.++....|+++..++.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999999999888888764321234679999888776543
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.3e-51 Score=411.81 Aligned_cols=361 Identities=14% Similarity=0.163 Sum_probs=288.1
Q ss_pred hHHHHHHHHHHHhcCCCCC--c-chHHHHHHHHHHHHHcCCceeccC-----------CCceEEEEe-CCCCCcEEEEEe
Q 013395 58 TVNWMKKMRRQIHENPELA--Y-EEFETSELIRRELDQLGIAYRWPV-----------AKTGVVATV-GSGSPPFVALRA 122 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s--~-~e~~~~~~i~~~l~~~g~~~~~~~-----------~~~n~~~~~-~~~~~~~ill~~ 122 (444)
..++++++++++++|||.+ + +|.++++||+++|+++|++++... .++|+++++ +++++|+|+|+|
T Consensus 12 ~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~~~~i~l~g 91 (427)
T PRK13013 12 RRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARDGDCVHFNS 91 (427)
T ss_pred hHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCCCCEEEEEe
Confidence 4578899999999999976 3 568999999999999999987432 156999999 444568999999
Q ss_pred ccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhh
Q 013395 123 DMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMI 193 (444)
Q Consensus 123 H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~ 193 (444)
|+||||+++ .|+++| ++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |..+++
T Consensus 92 H~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l~ 169 (427)
T PRK13013 92 HHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYLA 169 (427)
T ss_pred ccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHHH
Confidence 999999874 698777 46899999995 9999999999999999887889999999999999873 777888
Q ss_pred hccccc--ccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--
Q 013395 194 QEGVLE--NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR-- 269 (444)
Q Consensus 194 ~~~~~~--~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~-- 269 (444)
+.+.++ ++|++++.+ +... ..+. ...+|..+++|+++|+++|++.|+.|.|||..+++++.+|++...+
T Consensus 170 ~~~~~~~~~~d~~i~~e--p~~~-~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~~ 242 (427)
T PRK13013 170 EQGRFSPDRVQHVIIPE--PLNK-DRIC----LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLL 242 (427)
T ss_pred hcCCccccCCCEEEEec--CCCC-CceE----EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhhh
Confidence 777665 568877653 2211 1121 2245999999999999999999999999999999999999765311
Q ss_pred --c-C------CCCCCcEEEEEEeecCccc----------ccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhh-
Q 013395 270 --E-I------DPLDSQVVSVAMINGGSSY----------NMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH- 329 (444)
Q Consensus 270 --~-~------~~~~~~t~~v~~i~gG~~~----------nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~- 329 (444)
. . +.....++|++.|+||... |+||++|++.+|+|+.|.++.+++.++|++++++.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~~ 322 (427)
T PRK13013 243 ATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRARP 322 (427)
T ss_pred hcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCC
Confidence 0 0 0013578999999999766 999999999999999999999999999999998765433
Q ss_pred CCceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH--cCCcEEEeccCCCCCC
Q 013395 330 RCSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE--IPGSFLLLGMLNDSVG 405 (444)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg 405 (444)
+.+++++.. ..++++ +.++++++.+.+++++.+|.++.. ...+|++|++++.+. +|.++ .+||+
T Consensus 323 ~~~~~~~~~----~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~~--~~~~g~~D~~~~~~~g~~~~~v-~fGPg----- 390 (427)
T PRK13013 323 GFAYEIRDL----FEVLPTMTDRDAPVVRSVAAAIERVLGRQADY--VVSPGTYDQKHIDRIGKLKNCI-AYGPG----- 390 (427)
T ss_pred CceeEEEEc----ccCCcccCCCCCHHHHHHHHHHHHhhCCCCce--eecCccCCHHHHHhcCCCCCEE-EECCC-----
Confidence 445555432 223333 445689999999999988876532 456889999999885 34333 57764
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 406 SLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 406 ~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
....+|++|||++++++.+++++|+.++.++|+.
T Consensus 391 ~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 391 ILDLAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred CccccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 3367999999999999999999999999999864
No 8
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.4e-51 Score=412.22 Aligned_cols=373 Identities=18% Similarity=0.153 Sum_probs=297.9
Q ss_pred HHHHHHhhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--------------------CCCc
Q 013395 45 IKSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--------------------VAKT 104 (444)
Q Consensus 45 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--------------------~~~~ 104 (444)
+.+.+.+.++. ..++++++++++++|||.+++|.++++||+++|+++|++++.. ++++
T Consensus 7 ~~~~~~~~i~~--~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDA--GFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHh--hhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 44445555544 5678999999999999999999999999999999999987531 2578
Q ss_pred eEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceE
Q 013395 105 GVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTV 175 (444)
Q Consensus 105 n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i 175 (444)
||++++ +++ ++|+|+|+||+||||+++.+.|+++| ++||++||||+ |++++++|.|+++|++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 999999 444 36899999999999998777899988 47899999996 8999999999999999888889999
Q ss_pred EEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHH
Q 013395 176 VLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPIL 254 (444)
Q Consensus 176 ~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~ 254 (444)
.|+|++|||.+ +|+..++..++ ..|.+++.+ +..+... ...+|..+++|+++|+++|||.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~e--p~~~~i~------~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIPE--PTGEKLV------RAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEcC--CCCCccc------cccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 99999999976 58877776654 467777543 2222111 2345999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccC-----C-----CCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 013395 255 AVSSSVISLQNIVSREI-----D-----PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG 324 (444)
Q Consensus 255 ~~~~~l~~l~~~~~~~~-----~-----~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 324 (444)
.+++++..|+++..... . .....++|++.|+||...|+||++|++.+++|+.|++++++++++|++++++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~ 314 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAA 314 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHH
Confidence 99999999987642110 0 1124589999999999999999999999999999999999999999999977
Q ss_pred HHHhh----CCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH--HcCCcEEEec
Q 013395 325 QAAVH----RCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLG 398 (444)
Q Consensus 325 ~a~~~----~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G 398 (444)
.+... +...++++.....+++ .+..++++++.+.+++++.+|.++. +..++|++|++++.. .+|++. +|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~--~G 389 (427)
T PRK06837 315 AARDDRFLSNNPPEVVWSGFLAEGY-VLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC--YG 389 (427)
T ss_pred HHhcChhhhhCCCeEEEEecccCCc-CCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE--EC
Confidence 54332 2234454321111232 3345678999999999998898654 356899999999875 388653 67
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 399 MLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 399 ~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
++. .++|++||+++++++.+++++|+.++.++|+.+
T Consensus 390 p~~------~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~~ 425 (427)
T PRK06837 390 PSG------EGIHGFDERVDLESVRKVTKTIALFVAEWCGVE 425 (427)
T ss_pred CCC------CccCCCCceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 743 459999999999999999999999999998654
No 9
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.2e-50 Score=405.57 Aligned_cols=358 Identities=19% Similarity=0.259 Sum_probs=289.7
Q ss_pred hHHHHHHHHHHHhcCCCCCcch---HHHHHHHHHHHHHcCCceeccC----CCceEEEEeCCCCCcEEEEEeccCccCCc
Q 013395 58 TVNWMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWPV----AKTGVVATVGSGSPPFVALRADMDALPIQ 130 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e---~~~~~~i~~~l~~~g~~~~~~~----~~~n~~~~~~~~~~~~ill~~H~D~vp~~ 130 (444)
..++++++++++++|||.+++| .++++||+++|+++|++++..+ ..+|+++++++.++|+|+|+||+||||++
T Consensus 35 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~ill~~H~D~Vp~~ 114 (410)
T PRK06133 35 EQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRIMLIAHMDTVYLP 114 (410)
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceEEEEeecCccCCC
Confidence 5678999999999999998775 4899999999999999987532 35799999943346899999999999985
Q ss_pred CCCCCcccC--cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccccccee
Q 013395 131 ELVEWEHKS--KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAI 204 (444)
Q Consensus 131 ~~~~w~~~p--~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~ 204 (444)
. .|+++| .+||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++.++++. ..+.|++
T Consensus 115 ~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~-~~~~d~~ 191 (410)
T PRK06133 115 G--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAEL-AAQHDVV 191 (410)
T ss_pred C--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHHH-hccCCEE
Confidence 4 598877 57899999995 8999999999999999887788999999999999884 999998763 3467888
Q ss_pred EEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEE
Q 013395 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAM 283 (444)
Q Consensus 205 ~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~ 283 (444)
++.+ |+.+.+.+.. ..+|..+++|+++|+++||+ .|+.|.||+..+++++..|++... +....+++++.
T Consensus 192 i~~e--p~~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~----~~~~~t~~~~~ 261 (410)
T PRK06133 192 FSCE--PGRAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD----PAKGTTLNWTV 261 (410)
T ss_pred EEeC--CCCCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----CCCCeEEEeeE
Confidence 8775 3333233322 23599999999999999986 699999999999999999988632 23356899999
Q ss_pred eecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCcc---CCHHHHHHHHH
Q 013395 284 INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTM---NDVRIYQHVRR 360 (444)
Q Consensus 284 i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~---~d~~l~~~~~~ 360 (444)
++||.+.|+||++|++.+|+|+.|.++.+++.++|++++++ +...++++++++. ..+|++. .++++++.+++
T Consensus 262 i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~ 336 (410)
T PRK06133 262 AKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFE----RGRPPLEANAASRALAEHAQG 336 (410)
T ss_pred EECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEec----cccCCcccCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999987 3345666666643 2344443 34467888888
Q ss_pred HHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 361 VTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 361 ~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
++++. |.++.+.+...+|++|++++... +|.+++++|+.. .++|++||+++++++.+++++|+.++.++|++
T Consensus 337 ~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~~~~~~~~~~~ 409 (410)
T PRK06133 337 IYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYLLTRMIMELSRD 409 (410)
T ss_pred HHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHHHHHHHHHhhcC
Confidence 77764 65432112467899999999885 887765566532 45999999999999999999999999999876
Q ss_pred c
Q 013395 440 S 440 (444)
Q Consensus 440 ~ 440 (444)
+
T Consensus 410 ~ 410 (410)
T PRK06133 410 K 410 (410)
T ss_pred C
Confidence 4
No 10
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2e-50 Score=405.90 Aligned_cols=362 Identities=20% Similarity=0.239 Sum_probs=291.1
Q ss_pred hHHHHHHHHHHHhcCCCCCc-----chHHHHHHHHHHHHHcCCc-eeccC-------C--CceEEEEe-CCCCCcEEEEE
Q 013395 58 TVNWMKKMRRQIHENPELAY-----EEFETSELIRRELDQLGIA-YRWPV-------A--KTGVVATV-GSGSPPFVALR 121 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~-----~e~~~~~~i~~~l~~~g~~-~~~~~-------~--~~n~~~~~-~~~~~~~ill~ 121 (444)
+.++++++++++++|||.++ .|.++++|++++|+++|++ ++..+ . ++|+++++ +++++++|+|+
T Consensus 3 ~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~ 82 (400)
T PRK13983 3 LRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWII 82 (400)
T ss_pred hHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEE
Confidence 56788999999999999884 4889999999999999998 76321 1 68999999 44445799999
Q ss_pred eccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhh
Q 013395 122 ADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 192 (444)
Q Consensus 122 ~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 192 (444)
||+||||+++.+.|+++| ++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++++
T Consensus 83 ~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~ 162 (400)
T PRK13983 83 SHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYL 162 (400)
T ss_pred eeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHH
Confidence 999999998777899887 46899999994 8999999999999999888899999999999999874 88998
Q ss_pred hhc--ccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhcc
Q 013395 193 IQE--GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN-IVSR 269 (444)
Q Consensus 193 ~~~--~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~-~~~~ 269 (444)
++. +.+.+.|.+++. +.+.+++.... ...+|.++++|+++|+++|||.|+.|+||+..+++++..+++ +...
T Consensus 163 ~~~~~~~~~~~d~~i~~--~~~~~~~~~i~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~ 237 (400)
T PRK13983 163 LKKHPELFKKDDLILVP--DAGNPDGSFIE---IAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEK 237 (400)
T ss_pred HhhcccccCCCCEEEEe--cCCCCCCceeE---EeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 876 445567877764 33345443211 234599999999999999999999999999999999999987 3211
Q ss_pred c--CCC-C--CCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCC
Q 013395 270 E--IDP-L--DSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP 343 (444)
Q Consensus 270 ~--~~~-~--~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~ 343 (444)
. ..+ . ...+++++.+.+| ...|+||++|++.+|+|++|+++.++++++|++++++.+..++.+++++.... ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~ 316 (400)
T PRK13983 238 FNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQ 316 (400)
T ss_pred hcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cC
Confidence 1 111 1 1246777888877 58999999999999999999999999999999999987766666777765310 12
Q ss_pred CCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCch
Q 013395 344 TLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVL 422 (444)
Q Consensus 344 ~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~ 422 (444)
+..+++.|+++++.+.+++++++|.++.. ..++|++|++++... +|++. +|++. ..+|++||++.++++
T Consensus 317 ~~~~~~~~~~~v~~l~~a~~~~~g~~~~~--~~~~g~td~~~~~~~gip~v~--~Gp~~------~~~H~~nE~v~i~~l 386 (400)
T PRK13983 317 APPPTPPDSEIVKKLKRAIKEVRGIEPKV--GGIGGGTVAAFLRKKGYPAVV--WSTLD------ETAHQPNEYAKISNL 386 (400)
T ss_pred CccCCCCCcHHHHHHHHHHHHhcCCCcee--eeecCcHHHHHHHHcCCCEEE--eCCcc------ccCCCCCceeeHHHH
Confidence 33345678889999999999998987653 467889999888764 88754 36543 469999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013395 423 PIGAVIHAAFAHS 435 (444)
Q Consensus 423 ~~~~~~~~~~l~~ 435 (444)
.+++++|++++.+
T Consensus 387 ~~~~~~~~~~~~~ 399 (400)
T PRK13983 387 IEDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998753
No 11
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1e-49 Score=397.15 Aligned_cols=355 Identities=17% Similarity=0.234 Sum_probs=286.8
Q ss_pred HHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCccc
Q 013395 61 WMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (444)
Q Consensus 61 ~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~ 138 (444)
+++++++++++|||.+++|.++++|+.++|+++|++++.. ++.+|+++++++ ++|+|+|++|+||||+++.+.|+++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5678899999999999999999999999999999998743 357899999854 4689999999999999877789888
Q ss_pred C----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChhhhhhcccc--cccceeEEe
Q 013395 139 S----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVL--ENVEAIFGL 207 (444)
Q Consensus 139 p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~--~~~d~~~~~ 207 (444)
| .+||++||||+ |++++++|.|++.|++.+..++++|.|+|++|||.+ .|++.+++.... ..+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 7 45899999996 899999999999999888788999999999999986 389888754221 246887765
Q ss_pred cccCCCCCc-eeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-CCCCCcEEEEEEee
Q 013395 208 HLVHKYPTG-VVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-DPLDSQVVSVAMIN 285 (444)
Q Consensus 208 ~~~~~~~~g-~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~-~~~~~~t~~v~~i~ 285 (444)
++......+ .+ ....+|..+++|+++|+++|++.|+.|.||+..+++++..|+....+.. ......+++++.|+
T Consensus 162 ep~~~~~~~~~i----~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~ 237 (375)
T PRK13009 162 EPTSTERLGDVI----KNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNID 237 (375)
T ss_pred CCCcccCCCCeE----EEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEe
Confidence 532221111 11 1223589999999999999999999999999999999999987632211 22345689999999
Q ss_pred cCc-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCcc-CCHHHHHHHHHHHH
Q 013395 286 GGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTM-NDVRIYQHVRRVTA 363 (444)
Q Consensus 286 gG~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~ 363 (444)
||. ..|+||++|++.+|+|++|..+.+++.++|++++++ .++++++++. ..++++. +++++++.+.++++
T Consensus 238 ~G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~----~~~~p~~~~~~~~~~~l~~a~~ 309 (375)
T PRK13009 238 AGTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWT----LSGEPFLTPPGKLVDAVVAAIE 309 (375)
T ss_pred cCCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEe----cCCCcccCCCcHHHHHHHHHHH
Confidence 886 789999999999999999999999999999998863 3556666653 2222332 23779999999999
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
+.+|.++.. ...+|++|++++.+. +|++ .+||+. ..+|++||+++++++.+++++|+.++.+++.
T Consensus 310 ~~~g~~~~~--~~~~g~tda~~~~~~g~p~v--~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 375 (375)
T PRK13009 310 AVTGITPEL--STSGGTSDARFIADYGAQVV--EFGPVN------ATIHKVNECVSVADLEKLTRIYERILERLLA 375 (375)
T ss_pred HHhCCCcee--eccCCCccHHHHHHcCCCeE--EeccCc------ccCCCCCCcEEHHHHHHHHHHHHHHHHHHhC
Confidence 988987643 467888999999875 6654 367643 4599999999999999999999999998863
No 12
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2e-49 Score=398.48 Aligned_cols=357 Identities=18% Similarity=0.176 Sum_probs=284.2
Q ss_pred hHHHHHHHHHHHhcCCCCCcch---HHHHHHHHHHHHHcCCceeccC-----------------CCceEEEEeCCCCCcE
Q 013395 58 TVNWMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWPV-----------------AKTGVVATVGSGSPPF 117 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e---~~~~~~i~~~l~~~g~~~~~~~-----------------~~~n~~~~~~~~~~~~ 117 (444)
..+++++++++++++||.++++ .++++||+++|+++|++++..+ ..+||+++++++.+++
T Consensus 15 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~~~~~ 94 (402)
T PRK07338 15 RQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPEAPRQ 94 (402)
T ss_pred hHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCCCCcc
Confidence 5678889999999999998764 5799999999999999877321 1269999994333468
Q ss_pred EEEEeccCccCCcCCCCCcccC---cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chh
Q 013395 118 VALRADMDALPIQELVEWEHKS---KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAK 190 (444)
Q Consensus 118 ill~~H~D~vp~~~~~~w~~~p---~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~ 190 (444)
|+|+||+||||++. .|+.+ ++||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++
T Consensus 95 lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~ 171 (402)
T PRK07338 95 VLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASA 171 (402)
T ss_pred EEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhH
Confidence 99999999999853 34443 67899999995 9999999999999998887788999999999999985 888
Q ss_pred hhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcc
Q 013395 191 DMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSSVISLQNIVSR 269 (444)
Q Consensus 191 ~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g~nai~~~~~~l~~l~~~~~~ 269 (444)
.+++++. .+.+++++.+ |+.+.+.+.. ..+|..+++|+++|+++|+|. |+.|.||+..+++++.+|+++...
T Consensus 172 ~~~~~~~-~~~~~~i~~e--p~~~~~~v~~----~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~~l~~l~~~ 244 (402)
T PRK07338 172 PLLAELA-RGKHAALTYE--PALPDGTLAG----ARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELALALHALNGQ 244 (402)
T ss_pred HHHHHHh-ccCcEEEEec--CCCCCCcEEe----ecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHHHHHhhhcc
Confidence 8887743 3456666654 3333343321 225899999999999999996 899999999999999999886422
Q ss_pred cCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCcc
Q 013395 270 EIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTM 349 (444)
Q Consensus 270 ~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 349 (444)
....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..++++++++... ..+++...+
T Consensus 245 ----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~ 319 (402)
T PRK07338 245 ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHGGF-GRPPKPIDA 319 (402)
T ss_pred ----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEccc-cCCCCCCCc
Confidence 234689999999999999999999999999999999999999999999988765566665554210 112332223
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVI 428 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~ 428 (444)
.++++++.++++.++. |.++. ...++|++|++++... +|++. ++|++. ..+|++|||++++++.+++++
T Consensus 320 ~~~~l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~------~~~H~~~E~v~i~~l~~~~~~ 389 (402)
T PRK07338 320 AQQRLFEAVQACGAAL-GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRG------GNIHSEDEFVILDSLVERAQL 389 (402)
T ss_pred chHHHHHHHHHHHHHc-CCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCC------CCCCCccceEehhhHHHHHHH
Confidence 4557999999988774 87643 3568899999999875 88763 467643 458999999999999999999
Q ss_pred HHHHHHHHhhh
Q 013395 429 HAAFAHSYLVN 439 (444)
Q Consensus 429 ~~~~l~~~~~~ 439 (444)
|+.++.++++.
T Consensus 390 ~~~~l~~~~~~ 400 (402)
T PRK07338 390 SALILMRLAQG 400 (402)
T ss_pred HHHHHHHHhcC
Confidence 99999998754
No 13
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=1.6e-50 Score=402.86 Aligned_cols=348 Identities=20% Similarity=0.261 Sum_probs=281.8
Q ss_pred HHHHHHhcCCC---CCcchHHHHHHHHHHHHHcCCceeccC---CCc----eEEEEe-CCCCCcEEEEEeccCccCCcCC
Q 013395 64 KMRRQIHENPE---LAYEEFETSELIRRELDQLGIAYRWPV---AKT----GVVATV-GSGSPPFVALRADMDALPIQEL 132 (444)
Q Consensus 64 ~l~~~~~~~ps---~s~~e~~~~~~i~~~l~~~g~~~~~~~---~~~----n~~~~~-~~~~~~~ill~~H~D~vp~~~~ 132 (444)
+++++++++|| ++++|.++++||+++|+++|++++... ... |+++.+ +++++|+|+|++||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 56888999999 888999999999999999999986421 223 356666 5445689999999999999877
Q ss_pred CCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccccccee
Q 013395 133 VEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAI 204 (444)
Q Consensus 133 ~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~ 204 (444)
++|+++| +++|++||||+ |++++++|.|++.|++.+..++++|.|+|+++||.|+ |++.+++++.+++.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 7898887 46899999996 8999999999999999887889999999999999885 99999988776668888
Q ss_pred EEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC------CCCCCcE
Q 013395 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI------DPLDSQV 278 (444)
Q Consensus 205 ~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~------~~~~~~t 278 (444)
++.++ +. .+.+. ...+|..+++|+++|+++|||.|+.|.||+..+++++.+|+++..... ......+
T Consensus 162 i~~~~--~~-~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPEP--SG-GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECCC--CC-CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 86542 21 12222 123599999999999999999999999999999999999988743211 1124579
Q ss_pred EEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHH
Q 013395 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHV 358 (444)
Q Consensus 279 ~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 358 (444)
++++.++||...|+||++|++.+|+|+.|.++.++++++|++++++.+..++++++++... ..++....+.++++++.+
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 313 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVV-KWSGPNETPPDSRLVKAL 313 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCee-eecCCcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999988766666666554321 112122445688899999
Q ss_pred HHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013395 359 RRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVI 428 (444)
Q Consensus 359 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~ 428 (444)
.+++++.+|.++.. ...+|++|++++.+. +|++. +|++. ..++|++|||++++++.+++++
T Consensus 314 ~~~~~~~~g~~~~~--~~~~g~tD~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 314 EAIIKKVRGIEPEV--LVSTGGTDARFLRKAGIPSIV--YGPGD-----LETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHhCCCCeE--eeeccchhHHHHHHcCCcEEE--ECCCC-----ccccCCCCceeEHHHHHHHhhC
Confidence 99999988987543 467899999999876 88754 57642 3579999999999999998763
No 14
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.7e-49 Score=399.13 Aligned_cols=364 Identities=18% Similarity=0.177 Sum_probs=288.2
Q ss_pred hHHHHHHHHHHHhcCCCCC---cchHHHHHHHHHHHHHcCCceecc---CCCceEEEEe-CCCC--CcEEEEEeccCccC
Q 013395 58 TVNWMKKMRRQIHENPELA---YEEFETSELIRRELDQLGIAYRWP---VAKTGVVATV-GSGS--PPFVALRADMDALP 128 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s---~~e~~~~~~i~~~l~~~g~~~~~~---~~~~n~~~~~-~~~~--~~~ill~~H~D~vp 128 (444)
..++++++++++++|||++ ++|.++++||+++|+++|++++.. ++++|+++++ |+++ +|+|+|+||+||||
T Consensus 11 ~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp 90 (421)
T PRK08596 11 RKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAE 90 (421)
T ss_pred hHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccC
Confidence 4577889999999999998 468899999999999999998753 3578999999 5432 36899999999999
Q ss_pred CcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccccc
Q 013395 129 IQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLEN 200 (444)
Q Consensus 129 ~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~ 200 (444)
+++.++|+++| ++||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++++++++. .
T Consensus 91 ~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~ 168 (421)
T PRK08596 91 VSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCCERGY--D 168 (421)
T ss_pred CCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHHhcCC--C
Confidence 98877899887 46899999996 9999999999999999988899999999999999885 9999988754 4
Q ss_pred cceeEEecccCCCCCceeeeccCcccccceeEEEEEEec----------CCCCCCCCCCCCHHHHHHHHHHHHHHhhcc-
Q 013395 201 VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGK----------GGHAAIPQHCIDPILAVSSSVISLQNIVSR- 269 (444)
Q Consensus 201 ~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~----------~~Hss~p~~g~nai~~~~~~l~~l~~~~~~- 269 (444)
.|++++.+ ++... .+ .++|..++.++++|. .+|++.|+.|.||+..+++++..|+++...
T Consensus 169 ~d~~i~~e--p~~~~-~~------~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~~ 239 (421)
T PRK08596 169 ADFAVVVD--TSDLH-MQ------GQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERHW 239 (421)
T ss_pred CCEEEECC--CCCCc-cc------cccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHHHH
Confidence 67777654 32211 11 234777777777775 379999999999999999999999876321
Q ss_pred ----cC--CCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhh----CCceeEEec-
Q 013395 270 ----EI--DPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH----RCSAEVDFS- 338 (444)
Q Consensus 270 ----~~--~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~----~~~~~~~~~- 338 (444)
.. ......++|++.|+||...|+||++|++.+|+|+.|+++++++.++|++++++.+... ...+++++.
T Consensus 240 ~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
T PRK08596 240 AVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGG 319 (421)
T ss_pred hhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCCceeEEec
Confidence 01 1123468999999999999999999999999999999999999999999998753310 001122210
Q ss_pred ----cCCCCCCCC--ccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCC
Q 013395 339 ----GREHPTLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLH 411 (444)
Q Consensus 339 ----~~~~~~~~~--~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H 411 (444)
......+|+ ++.++++++.+.+++++.+|.++. +...++++|++++... +|++. +|++ ....+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg-----~~~~~H 390 (421)
T PRK08596 320 ESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YGPG-----TLEEAH 390 (421)
T ss_pred ccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--ECCC-----cccccC
Confidence 000112343 355788999999999999898753 3556788999999875 88753 5653 336799
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHhhhcC
Q 013395 412 SPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 412 ~~nE~i~i~~~~~~~~~~~~~l~~~~~~~~ 441 (444)
++||+++++++.+++++|+.++.++|+.++
T Consensus 391 ~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 391 SVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred CCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999997654
No 15
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=3e-49 Score=396.39 Aligned_cols=362 Identities=17% Similarity=0.163 Sum_probs=286.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
..+++++++++++++||.+++|.++++||.++|+++|+++...+..+|++++++++ .|+|+|++|+||||+++.++|++
T Consensus 13 ~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~-~~~i~~~~H~DtVp~~~~~~w~~ 91 (399)
T PRK13004 13 YKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG-KKLIAFDAHIDTVGIGDIKNWDF 91 (399)
T ss_pred HHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC-CcEEEEEeccCccCCCChhhccc
Confidence 55788999999999999999999999999999999999865555578999999544 38999999999999987778998
Q ss_pred cC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-C-ChhhhhhcccccccceeEEec
Q 013395 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T-GAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 138 ~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~-G~~~~~~~~~~~~~d~~~~~~ 208 (444)
+| .+||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.+ + |++.++++..+ ++|++++.+
T Consensus 92 ~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~-~~d~~i~~e 170 (399)
T PRK13004 92 DPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI-KPDFVVITE 170 (399)
T ss_pred CCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC-CCCEEEEcc
Confidence 87 45899999996 899999999999999988888999999999999975 3 67777776333 468888764
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--cCCCCCCcEEEEEEeec
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR--EIDPLDSQVVSVAMING 286 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~--~~~~~~~~t~~v~~i~g 286 (444)
+ ... .+. ...+|..+++|+++|+++|++.|+.|.||+..+++++..|+.+... ........+++++.+.+
T Consensus 171 ~--~~~--~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~ 242 (399)
T PRK13004 171 P--TDL--NIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGKGTLTVSDIFS 242 (399)
T ss_pred C--CCC--ceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCCceEEEeeeec
Confidence 3 221 121 1235999999999999999999999999999999999999887533 22223456899999987
Q ss_pred C-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEecc---------CCCCCCCCc--cCCHHH
Q 013395 287 G-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSG---------REHPTLPPT--MNDVRI 354 (444)
Q Consensus 287 G-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~---------~~~~~~~~~--~~d~~l 354 (444)
| .+.|+||++|++.+|+|+.|..+.+++.+++++++.. ...+.++++.... .....+|++ +.++++
T Consensus 243 g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 320 (399)
T PRK13004 243 TSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEF 320 (399)
T ss_pred CCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccccccccCCCCHH
Confidence 6 5899999999999999999999999999999988432 1223333322100 000123433 457889
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH-H-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013395 355 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-E-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAF 432 (444)
Q Consensus 355 ~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~ 432 (444)
++.+.+++++++|.++.. ...++++|++.+.+ . +|++ .+|+ |....+|++||+++++++.+++++|+.+
T Consensus 321 ~~~l~~a~~~~~g~~~~~--~~~~~~td~~~~~~~~Gip~v--~~Gp-----g~~~~aH~~nE~i~i~~l~~~~~~~~~~ 391 (399)
T PRK13004 321 VKAAVEAYKGLFGKAPEV--DKWTFSTNGVSIAGRAGIPTI--GFGP-----GKEPLAHAPNEYTWKEQLVKAAAMYAAI 391 (399)
T ss_pred HHHHHHHHHHHhCCCCee--cccccccCCeEEehhcCCCEE--EECC-----CcccccCCCCceeEHHHHHHHHHHHHHH
Confidence 999999999998876532 45677788777753 3 8865 3576 3345799999999999999999999999
Q ss_pred HHHHhhhc
Q 013395 433 AHSYLVNS 440 (444)
Q Consensus 433 l~~~~~~~ 440 (444)
+.++|+++
T Consensus 392 ~~~~~~~~ 399 (399)
T PRK13004 392 PKSLLKKK 399 (399)
T ss_pred HHHHhhcC
Confidence 99999653
No 16
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-49 Score=400.77 Aligned_cols=363 Identities=17% Similarity=0.187 Sum_probs=280.1
Q ss_pred HHHHHHHHHHhcCCCCCcc-h--HHHHHHHHHHHHHcCCceeccC--CCceEEEEeCCCCCcEEEEEeccCccCCcCCCC
Q 013395 60 NWMKKMRRQIHENPELAYE-E--FETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQELVE 134 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~-e--~~~~~~i~~~l~~~g~~~~~~~--~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~ 134 (444)
+.++++++++++|||.+++ | .++++||.++|+++|++++..+ +++|++++++.+++|+|+|+||+||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 4677889999999999864 3 6999999999999999987433 578999999544468999999999999987678
Q ss_pred CcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccc-ccccceeE
Q 013395 135 WEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV-LENVEAIF 205 (444)
Q Consensus 135 w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~-~~~~d~~~ 205 (444)
|+++| ++||+|||||+ |++++++|.|++.|++.+ .++.+|.|+|++|||.|+ |++.++++.. .-++|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 99988 46899999995 999999999999987654 578899999999999985 8888776521 11457766
Q ss_pred EecccCCCCCceeeeccCcccccceeEEEEEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-------------
Q 013395 206 GLHLVHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAIPQHCIDPILAVSSSVISLQNIVSRE------------- 270 (444)
Q Consensus 206 ~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G--~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~------------- 270 (444)
+ ++....+.+... ....++|..+++++++| +++|||.|+.+.||+..+++++.+|.+.....
T Consensus 161 ~-E~~~~~~~~~~~--i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 M-EGAGLDPKGRPQ--IVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred E-CCCCccCCCCeE--EEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 4 322211222111 11234699999999999 99999999999999999999999997542000
Q ss_pred ---------------------------C--------CCCCCcEEEEEEeecC----cccccccCcEEEEEEEeCCChhhH
Q 013395 271 ---------------------------I--------DPLDSQVVSVAMINGG----SSYNMIPDSATVAGTFRAFNKKRF 311 (444)
Q Consensus 271 ---------------------------~--------~~~~~~t~~v~~i~gG----~~~nviP~~a~~~~diR~~~~~~~ 311 (444)
. .....+++|++.++|| ...|+||++|++.+|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0112468999999887 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH--H
Q 013395 312 NALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--E 389 (444)
Q Consensus 312 ~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~ 389 (444)
+++.+.|++++++. +..+++.+.. ..+++ .++.++++++.+++++++++|.++.. ....+|++|+++|.+ .
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~~~-~~~p~-~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~g 390 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIVHG-FEYPV-RTSVNSKVVKAMIESAKRVYGTEPVV-IPNSAGTQPMGLFVYKLG 390 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEEcC-Cccee-ecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCCcchHHHHHHHhC
Confidence 99999999998752 2345555432 11222 23457889999999999998887543 234456778888865 3
Q ss_pred cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 390 IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 390 ~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
+|+++..+|+++.+ ..+|++||+|+++++.+++++|..++.++.
T Consensus 391 ip~v~~~~g~g~~~----~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 391 IRDIVSAIGVGGYY----SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CCcceeecccCCCC----cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 88765456654322 579999999999999999999999998764
No 17
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=4.2e-49 Score=391.94 Aligned_cols=352 Identities=19% Similarity=0.263 Sum_probs=282.0
Q ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccC-
Q 013395 63 KKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKS- 139 (444)
Q Consensus 63 ~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p- 139 (444)
+++++++++|||.+++|.++++||+++|+++|++++.. ++++|++++.++ .+|+|+|++|+||||+++.++|+++|
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 46789999999999999999999999999999998743 356799998754 46899999999999998777898887
Q ss_pred ---cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChhhhhhcccc--cccceeEEecc
Q 013395 140 ---KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVL--ENVEAIFGLHL 209 (444)
Q Consensus 140 ---~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~--~~~d~~~~~~~ 209 (444)
.+||++||||+ |+++++++.|++.+++.+..++++|.|+|++|||.+ .|++.+++.... ..+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 45899999995 899999999999999888778899999999999986 388888754211 24788886654
Q ss_pred cCCCCC-ceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCcEEEEEEeecC
Q 013395 210 VHKYPT-GVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDPLDSQVVSVAMINGG 287 (444)
Q Consensus 210 ~~~~~~-g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-~~~~~~~t~~v~~i~gG 287 (444)
...... +.+. ...+|..+++++++|+++|++.|+.+.||+..+++++..|++..... .......+++++.++||
T Consensus 161 ~~~~~~~~~i~----~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g 236 (370)
T TIGR01246 161 SSVKKLGDVIK----NGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAG 236 (370)
T ss_pred CCcccCCceEE----EeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecC
Confidence 322211 1221 22358999999999999999999999999999999999998753221 11234568999999999
Q ss_pred c-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHh
Q 013395 288 S-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL 366 (444)
Q Consensus 288 ~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 366 (444)
. ..|+||++|++.+|+|++|+++.+++.+.|+++++. ++.++++++.. ...|...+++++++.+.+++++.+
T Consensus 237 ~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~---~~~p~~~~~~~~~~~~~~a~~~~~ 309 (370)
T TIGR01246 237 TGANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSL---SGEPFLTNDGKLIDKAREAIEETN 309 (370)
T ss_pred CCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEec---CCcceeCCCCHHHHHHHHHHHHHh
Confidence 5 689999999999999999999999999999988754 45566666531 122222237889999999999988
Q ss_pred CCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 367 GEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 367 g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
|.++. +...+|++|++++... +|++ .+|++. ..+|++||+++++++.+++++|+.++.++
T Consensus 310 g~~~~--~~~~~g~~d~~~~~~~g~p~~--~~Gp~~------~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 310 GIKPE--LSTGGGTSDGRFIALMGAEVV--EFGPVN------ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCCc--eecCCCCchHHHHHHcCCCEE--EecCCc------ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 97754 3567889999999875 6654 367754 45999999999999999999999998764
No 18
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.4e-48 Score=391.92 Aligned_cols=364 Identities=20% Similarity=0.223 Sum_probs=282.1
Q ss_pred HHHHHHHHHHHhcCCCCCcc--hHHHHHHHHHHHHHcCCceecc---CCCceEEEEe-CCCC-CcEEEEEeccCccCCcC
Q 013395 59 VNWMKKMRRQIHENPELAYE--EFETSELIRRELDQLGIAYRWP---VAKTGVVATV-GSGS-PPFVALRADMDALPIQE 131 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~--e~~~~~~i~~~l~~~g~~~~~~---~~~~n~~~~~-~~~~-~~~ill~~H~D~vp~~~ 131 (444)
.++++++++++++|||.++. |.++++|++++|+++|++++.. ++++|+++.+ ++++ +|+|+|+|||||||+++
T Consensus 8 ~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~ 87 (400)
T TIGR01880 8 EDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR 87 (400)
T ss_pred hHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc
Confidence 36677889999999998754 6789999999999999987632 3578999999 5444 48999999999999876
Q ss_pred CCCCcccCc-----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhccccccc
Q 013395 132 LVEWEHKSK-----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGVLENV 201 (444)
Q Consensus 132 ~~~w~~~p~-----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~~~~~ 201 (444)
..|.++|. +||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++.+++++.+...
T Consensus 88 -~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~ 166 (400)
T TIGR01880 88 -EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKAL 166 (400)
T ss_pred -ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCC
Confidence 47988772 5899999996 8999999999999999888889999999999999874 99999987666666
Q ss_pred ceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------cCC
Q 013395 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR---------EID 272 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~---------~~~ 272 (444)
|.+++++.....|++.. ..+..++|..+++|+++|+++||+.+. ..||+..+++++..|+++... ...
T Consensus 167 ~~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 243 (400)
T TIGR01880 167 NLGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLA 243 (400)
T ss_pred ceEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccc
Confidence 77777643222233321 223345699999999999999999864 479999999999888764210 011
Q ss_pred CCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCH
Q 013395 273 PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDV 352 (444)
Q Consensus 273 ~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~ 352 (444)
....+|++++.++||...|+||++|++.+|+|+.|.++.+++.++|++++++. ..++++++.... ..++..+.+.++
T Consensus 244 ~~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 320 (400)
T TIGR01880 244 IGDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHS-GKPLVTPHDDSN 320 (400)
T ss_pred ccccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecC-CCCCCCCCCCCC
Confidence 11247999999999999999999999999999999999999999999998762 223344443221 111111233567
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Q 013395 353 RIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAA 431 (444)
Q Consensus 353 ~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~ 431 (444)
++++.+++++++. +.++. +...+|++|++++.+. +|++ .+||.. +....+|++||+++++++.+++++|++
T Consensus 321 ~lv~~l~~a~~~~-~~~~~--~~~~~g~tDa~~~~~~gip~v--~fgp~~---~~~~~aH~~dE~i~i~~l~~~~~~~~~ 392 (400)
T TIGR01880 321 PWWVAFKDAVKEM-GCTFK--PEILPGSTDSRYIRAAGVPAL--GFSPMN---NTPVLLHDHNEFLNEAVFLRGIEIYQT 392 (400)
T ss_pred HHHHHHHHHHHHc-CCeec--ceeecCcchHHHHHhCCCCeE--EECCcc---CCcccccCCCCceEHHHHHHHHHHHHH
Confidence 8999999999996 54422 2467899999999875 8874 357643 112469999999999999999999999
Q ss_pred HHHHHh
Q 013395 432 FAHSYL 437 (444)
Q Consensus 432 ~l~~~~ 437 (444)
++.++.
T Consensus 393 ~l~~~~ 398 (400)
T TIGR01880 393 LISALA 398 (400)
T ss_pred HHHHhh
Confidence 998875
No 19
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-49 Score=402.29 Aligned_cols=368 Identities=15% Similarity=0.194 Sum_probs=281.5
Q ss_pred hHHHHHHHHHHHhcCCCCCcchH---------HHHHHHHHHHHHcCCceeccC-CCceEEEEe-CCCCC-cEEEEEeccC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEF---------ETSELIRRELDQLGIAYRWPV-AKTGVVATV-GSGSP-PFVALRADMD 125 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~---------~~~~~i~~~l~~~g~~~~~~~-~~~n~~~~~-~~~~~-~~ill~~H~D 125 (444)
..++++++++++++|||.+++|. ++++|++++|++.|++++... +..|+++.+ +++++ |+|+|+||+|
T Consensus 42 ~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~D 121 (486)
T PRK08262 42 DEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQD 121 (486)
T ss_pred CHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECccc
Confidence 35788999999999999998763 488999999999998766332 235788887 65544 8999999999
Q ss_pred ccCCcCC--CCCcccC----cCCCccccCc---chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 126 ALPIQEL--VEWEHKS----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 126 ~vp~~~~--~~w~~~p----~~~g~i~grG---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
|||+++. ..|+++| ++||++|||| ||++++++|.|++.|++.+..++++|.|+|++|||.|+ |++.+++.
T Consensus 122 vVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~ 201 (486)
T PRK08262 122 VVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAEL 201 (486)
T ss_pred ccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHH
Confidence 9998753 4698877 4789999999 59999999999999999888899999999999999885 88888754
Q ss_pred cccc--ccceeE------Eecc--cCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 013395 196 GVLE--NVEAIF------GLHL--VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN 265 (444)
Q Consensus 196 ~~~~--~~d~~~------~~~~--~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~ 265 (444)
.... +.|+++ ..+. ...+|++.+. ...+|..+++|+++|+++|||.|+. .||+..+++++.+|++
T Consensus 202 l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i~----~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~ 276 (486)
T PRK08262 202 LKERGVRLAFVLDEGGAITEGVLPGVKKPVALIG----VAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLED 276 (486)
T ss_pred HHHhcCCEEEEEeCCceecccccCCCCceEEeeE----EeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhh
Confidence 1111 233332 1111 1123434332 3346999999999999999999988 9999999999999986
Q ss_pred hhccc--------------------------------------------CCCCCCcEEEEEEeecCcccccccCcEEEEE
Q 013395 266 IVSRE--------------------------------------------IDPLDSQVVSVAMINGGSSYNMIPDSATVAG 301 (444)
Q Consensus 266 ~~~~~--------------------------------------------~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~ 301 (444)
...+. ......+|++++.|+||...|+||++|++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~ 356 (486)
T PRK08262 277 NPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATV 356 (486)
T ss_pred CCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEE
Confidence 31000 0012246899999999999999999999999
Q ss_pred EEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCc
Q 013395 302 TFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSE 381 (444)
Q Consensus 302 diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~t 381 (444)
|+|++|+++.+++.++|++++++. .+++++......+.+....++++++.+++++++.+|.... .+...+|++
T Consensus 357 diR~~p~~~~~~i~~~i~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~t 429 (486)
T PRK08262 357 NFRILPGDSVESVLAHVRRAVADD------RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGAT 429 (486)
T ss_pred EEEeCCCCCHHHHHHHHHHHhccC------ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccc
Confidence 999999999999999999988652 3444432211122334456788999999999999874222 234578999
Q ss_pred HHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 382 DFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 382 D~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
|+++|....|.++. +++...+||+...+|++||+++++++.+++++|+.++.++++
T Consensus 430 Da~~~~~~~p~~~~-~~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 430 DSRHYSGISDNVYR-FSPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cHHHHHHhcCCeEE-ECCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 99999887776543 333333456667899999999999999999999999988864
No 20
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=3.9e-48 Score=387.99 Aligned_cols=358 Identities=20% Similarity=0.211 Sum_probs=281.7
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
..+++++++++++++||++++|.++++||.++|+++|++....+..+|+++.++.+ +|+|+|+||+||||+++..+|++
T Consensus 11 ~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtVp~~~~~~w~~ 89 (395)
T TIGR03320 11 YRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVGIGDSKQWQF 89 (395)
T ss_pred HHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEecccccCCCCcccccc
Confidence 45788999999999999999999999999999999999854334467999998543 48999999999999988788999
Q ss_pred cC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC--hhhhhhcccccccceeEEec
Q 013395 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG--AKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 138 ~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G--~~~~~~~~~~~~~d~~~~~~ 208 (444)
+| ++||++||||+ |++++++|.|+++|++.+..++++|.|++++|||.++| .+.+++...+ .+|++++.+
T Consensus 90 ~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~iv~e 168 (395)
T TIGR03320 90 DPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI-KPEFVVITE 168 (395)
T ss_pred CCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-CCCEEEEcC
Confidence 88 46899999995 99999999999999998877888999999999997654 3556554222 468877653
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CCCcEEEEEEeec
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDP-LDSQVVSVAMING 286 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-~~~-~~~~t~~v~~i~g 286 (444)
|+.. .+. ...+|..+++|+++|+++|||.|+.|.||+..+++++..|++..... .++ .+..+++++.+++
T Consensus 169 --p~~~--~i~----~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~ 240 (395)
T TIGR03320 169 --PTDM--NIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFF 240 (395)
T ss_pred --CCcc--ceE----EecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeec
Confidence 2221 121 22359999999999999999999999999999999999998874321 122 2346899999998
Q ss_pred Cc-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCC-----------CCCC--ccCCH
Q 013395 287 GS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP-----------TLPP--TMNDV 352 (444)
Q Consensus 287 G~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~-----------~~~~--~~~d~ 352 (444)
|. ..|+||++|++.+|+|+.|+++.+++.++|++++.. .+..+++++.....+ .+|+ ++.++
T Consensus 241 g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (395)
T TIGR03320 241 SSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAV----QGAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDH 316 (395)
T ss_pred CCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhh----cCCCceEeeeccCcccccccccccccccCccccCCCC
Confidence 75 899999999999999999999999999999998643 222344443211001 2343 34578
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCcCcHHH-HHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013395 353 RIYQHVRRVTAEILGEENVKLAPIFTGSEDFA-FFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHA 430 (444)
Q Consensus 353 ~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~ 430 (444)
++++.+.+++++++|.++.. ...++++|.. ++.+. +|++ .+|| |+..++|++||||+++++.+++++|+
T Consensus 317 ~~v~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v--~~Gp-----g~~~~aH~~nE~v~i~~l~~~~~~~~ 387 (395)
T TIGR03320 317 LITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVI--GFGP-----GDEDQAHAPNEKTWKEDLVRAAAMYA 387 (395)
T ss_pred HHHHHHHHHHHHHhCCCCce--eecceecccceehhhcCCCEE--EECC-----CchhhccCCCcEEEHHHHHHHHHHHH
Confidence 89999999999998887533 3566777774 44443 7865 4676 44467999999999999999999999
Q ss_pred HHHHHHhh
Q 013395 431 AFAHSYLV 438 (444)
Q Consensus 431 ~~l~~~~~ 438 (444)
+++.++|.
T Consensus 388 ~~~~~~~~ 395 (395)
T TIGR03320 388 AIPTVYLE 395 (395)
T ss_pred HHHHHhhC
Confidence 99999884
No 21
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.2e-48 Score=388.94 Aligned_cols=349 Identities=19% Similarity=0.275 Sum_probs=275.4
Q ss_pred HHHHHHHHHHhcCCCCCcch-HHHHHHHHHHHHHcCCceecc----CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCC
Q 013395 60 NWMKKMRRQIHENPELAYEE-FETSELIRRELDQLGIAYRWP----VAKTGVVATVGSGSPPFVALRADMDALPIQELVE 134 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e-~~~~~~i~~~l~~~g~~~~~~----~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~ 134 (444)
.+++++++++++|||++++| .++++|++++|+++|++++.. .+++|++++++++.+|+|+|+||+||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 45788999999999999887 599999999999999997642 2468999999644468999999999999865 47
Q ss_pred CcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhccccc--cccee
Q 013395 135 WEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLE--NVEAI 204 (444)
Q Consensus 135 w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~--~~d~~ 204 (444)
|+++| ++||++||||+ |++++++|.|+++|++. .++++|.|+|++|||.| .|++.+++..... +.|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 98887 36899999995 99999999999999876 46789999999999987 5999998753221 35666
Q ss_pred EEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--C------CCC
Q 013395 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID--P------LDS 276 (444)
Q Consensus 205 ~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~--~------~~~ 276 (444)
+.. +|++. .....++|..+++|+++|+++|+|.|+.+.||+..+++++..|+++..+... + ...
T Consensus 161 i~~-----ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG-----EPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc-----cCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 643 23221 1112235999999999999999999999999999999999999886432211 1 113
Q ss_pred cEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH------HHHhhCCceeEEeccCCCCCCCCcc-
Q 013395 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG------QAAVHRCSAEVDFSGREHPTLPPTM- 349 (444)
Q Consensus 277 ~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~- 349 (444)
++++++.++||...|+||++|++.+|+|+.+..+.+++.++|++++++ .+..++++++++.. ..+|++.
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~ 308 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEPL----SAYPGLDT 308 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEec----cCCCCCCC
Confidence 689999999999999999999999999999999999999999999977 24455666666543 2344443
Q ss_pred -CCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013395 350 -NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAV 427 (444)
Q Consensus 350 -~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~ 427 (444)
.++++++.+++++ +.++ .....+++|++++... +|++. +|+ |....+|++||+|.++++.++++
T Consensus 309 ~~~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~Gp-----g~~~~~H~~~E~i~i~~l~~~~~ 374 (385)
T PRK07522 309 AEDAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CGP-----GSIEQAHKPDEFVELAQLAACEA 374 (385)
T ss_pred CCCcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--ECC-----CChhhCCCCCccccHHHHHHHHH
Confidence 3467888877654 4432 1345678999999864 77643 575 43457999999999999999999
Q ss_pred HHHHHHHHHh
Q 013395 428 IHAAFAHSYL 437 (444)
Q Consensus 428 ~~~~~l~~~~ 437 (444)
+|+.++.++.
T Consensus 375 ~~~~~~~~~~ 384 (385)
T PRK07522 375 FLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 22
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.6e-48 Score=388.56 Aligned_cols=355 Identities=21% Similarity=0.252 Sum_probs=286.5
Q ss_pred hHHHHHHHHHHHhcCCCCC---cchHHHHHHHHHHHHHcCCceeccC---C--------CceEEEEeCCCCCcEEEEEec
Q 013395 58 TVNWMKKMRRQIHENPELA---YEEFETSELIRRELDQLGIAYRWPV---A--------KTGVVATVGSGSPPFVALRAD 123 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s---~~e~~~~~~i~~~l~~~g~~~~~~~---~--------~~n~~~~~~~~~~~~ill~~H 123 (444)
..++++++++++++|||.+ .+|.++++||+++|+++|++++... . ++|+++..+++ +|+|+|+||
T Consensus 4 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ill~~H 82 (394)
T PRK08651 4 MMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSG-NPHLHFNGH 82 (394)
T ss_pred hHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCC-CceEEEEee
Confidence 5688899999999999988 6678999999999999999876432 1 24678776544 489999999
Q ss_pred cCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 124 MDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 124 ~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
+||||+++. .|+.+| .++|++||||+ |++++++|.|++.|++.+ +++|.|+|++|||.|+ |+++++++
T Consensus 83 lDtvp~~~~-~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~ 158 (394)
T PRK08651 83 YDVVPPGEG-WSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEE 158 (394)
T ss_pred eeeecCCCC-ccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhc
Confidence 999998753 267777 36899999996 999999999999998765 7999999999999985 99999987
Q ss_pred ccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC----
Q 013395 196 GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI---- 271 (444)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~---- 271 (444)
+.. ++|.+++.+ +... +.+.. ..+|..+++|+++|+++|++.|+.|+||+..+++++.+|++...+..
T Consensus 159 ~~~-~~d~~i~~~--~~~~-~~i~~----~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~ 230 (394)
T PRK08651 159 GKV-TPDYVIVGE--PSGL-DNICI----GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE 230 (394)
T ss_pred cCC-CCCEEEEec--CCCC-CceEE----ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 544 367766553 2221 12221 23599999999999999999999999999999999999987532111
Q ss_pred --C-CCCCcEEEEEE--eecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCC
Q 013395 272 --D-PLDSQVVSVAM--INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLP 346 (444)
Q Consensus 272 --~-~~~~~t~~v~~--i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 346 (444)
. .....+++++. ++||...|+||++|++.+|+|+.|..+.+++.++|++++++.+.++++++++++. ..++
T Consensus 231 ~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~----~~~~ 306 (394)
T PRK08651 231 YDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEIT----PFSE 306 (394)
T ss_pred ccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEe----cccC
Confidence 1 12345788888 9999999999999999999999999999999999999999888888877777654 2233
Q ss_pred Cc--cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 013395 347 PT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLP 423 (444)
Q Consensus 347 ~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~ 423 (444)
+. ..++++++.+++++++++|.++.+ ....|++|+++|... +|++. +|++ ....+|++||+++++++.
T Consensus 307 ~~~~~~~~~l~~~~~~a~~~~~g~~~~~--~~~~g~tD~~~~~~~gip~v~--~Gpg-----~~~~~H~~~E~i~~~~l~ 377 (394)
T PRK08651 307 AFVTDPDSELVKALREAIREVLGVEPKK--TISLGGTDARFFGAKGIPTVV--YGPG-----ELELAHAPDEYVEVKDVE 377 (394)
T ss_pred CccCCCCCHHHHHHHHHHHHHhCCCCce--eeecCcccHHHHhhCCCcEEE--ECCC-----ChHhcCCCCceeEHHHHH
Confidence 33 345679999999999988977543 467899999999886 88743 4764 334799999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 013395 424 IGAVIHAAFAHSYLV 438 (444)
Q Consensus 424 ~~~~~~~~~l~~~~~ 438 (444)
+++++|..++.++..
T Consensus 378 ~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 378 KAAKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998753
No 23
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=4.3e-48 Score=387.60 Aligned_cols=358 Identities=20% Similarity=0.200 Sum_probs=282.1
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
..+++++++++++++||++++|.++++||.++|+++|+++...+...|+++.++++ .|+|+|++|+||||+++.+.|++
T Consensus 11 ~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtVp~~~~~~W~~ 89 (395)
T TIGR03526 11 YRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVGIGDMDQWQF 89 (395)
T ss_pred HHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccccCCCCcccccC
Confidence 55789999999999999999999999999999999999854344467999998543 47999999999999988788999
Q ss_pred cC----cCCCccccCc---chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-C-ChhhhhhcccccccceeEEec
Q 013395 138 KS----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T-GAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 138 ~p----~~~g~i~grG---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~-G~~~~~~~~~~~~~d~~~~~~ 208 (444)
+| .+||++|||| ||++++++|.|++.|++.+..+++++.|++++|||.+ + |+..+++++.+ +.|++++.+
T Consensus 90 ~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~i~~e 168 (395)
T TIGR03526 90 DPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI-KPEFVVITE 168 (395)
T ss_pred CCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-CCCEEEecC
Confidence 88 4689999999 5999999999999999988777889999999999954 2 56677765433 467877653
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CCCcEEEEEEeec
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDP-LDSQVVSVAMING 286 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-~~~-~~~~t~~v~~i~g 286 (444)
++. ..+. ...+|..+++|+++|+++|++.|+.|.|||..+++++.+|+++.... .++ ....+++++.+++
T Consensus 169 --p~~--~~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~ 240 (395)
T TIGR03526 169 --PTD--MNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFF 240 (395)
T ss_pred --CCC--ceEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeec
Confidence 222 1221 22359999999999999999999999999999999999998874322 122 2346999999998
Q ss_pred Cc-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCC-----------CCCC--ccCCH
Q 013395 287 GS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP-----------TLPP--TMNDV 352 (444)
Q Consensus 287 G~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~-----------~~~~--~~~d~ 352 (444)
|. ..|+||++|++.+|+|+.|+++.+++.++|+++++.. +..+++++.....+ .+|+ .+.++
T Consensus 241 g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 316 (395)
T TIGR03526 241 SSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDH 316 (395)
T ss_pred CCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEeccccccccccccccccccCccccCCCC
Confidence 75 8999999999999999999999999999999987542 22333332110001 2333 34678
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHH-HHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013395 353 RIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFF-LDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHA 430 (444)
Q Consensus 353 ~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~-~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~ 430 (444)
++++.+.+++++++|.++.. ...++++|++.+ .+. +|++ .+|| |+...+|++||||+++++.+++++|+
T Consensus 317 ~~~~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v--~~Gp-----g~~~~aH~~dE~i~i~~l~~~~~~~~ 387 (395)
T TIGR03526 317 LITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVI--GFGP-----GDEDQAHAPNEKTWKEDLVKAAAMYA 387 (395)
T ss_pred HHHHHHHHHHHHHhCCCCce--eeeeeecccceehhhcCCCEE--EECC-----cchhhccCCCceEEHHHHHHHHHHHH
Confidence 89999999999998886532 355677777444 443 7865 4676 33467999999999999999999999
Q ss_pred HHHHHHhh
Q 013395 431 AFAHSYLV 438 (444)
Q Consensus 431 ~~l~~~~~ 438 (444)
++++.+|+
T Consensus 388 ~~~~~~~~ 395 (395)
T TIGR03526 388 AIPTVYLQ 395 (395)
T ss_pred HHHHHhcC
Confidence 99999874
No 24
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-48 Score=395.40 Aligned_cols=360 Identities=18% Similarity=0.205 Sum_probs=280.9
Q ss_pred HHHHHHHHHHHhcCCCCC--cchHHHHHHHHHHHHHcCCcee---c---cCCCceEEEEe-CCCCCcEEEEEeccCccCC
Q 013395 59 VNWMKKMRRQIHENPELA--YEEFETSELIRRELDQLGIAYR---W---PVAKTGVVATV-GSGSPPFVALRADMDALPI 129 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s--~~e~~~~~~i~~~l~~~g~~~~---~---~~~~~n~~~~~-~~~~~~~ill~~H~D~vp~ 129 (444)
.++++++++++++|||.+ ++|.++++|+.++|+++|++++ . .++++|+++++ +++++|+|+|+||+||||+
T Consensus 36 ~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~ 115 (472)
T PRK09133 36 QQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEA 115 (472)
T ss_pred HHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCC
Confidence 467888899999999987 6789999999999999999853 2 23578999999 5555689999999999998
Q ss_pred cCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CC-CChhhhhhcccc-c
Q 013395 130 QELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE-RG-TGAKDMIQEGVL-E 199 (444)
Q Consensus 130 ~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-~g-~G~~~~~~~~~~-~ 199 (444)
++ ++|+++| ++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++||| .| .|++.+++.... -
T Consensus 116 ~~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~ 194 (472)
T PRK09133 116 KR-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLI 194 (472)
T ss_pred Ch-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhcc
Confidence 65 3699887 46899999996 8999999999999999888889999999999999 66 499988876321 1
Q ss_pred ccceeEEecccC------CCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---
Q 013395 200 NVEAIFGLHLVH------KYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE--- 270 (444)
Q Consensus 200 ~~d~~~~~~~~~------~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~--- 270 (444)
+.|++++ +... ++|+.. .....++|..+++|+++|+++|||.|+ +.|||..+++++.+|++...+.
T Consensus 195 ~~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~ 269 (472)
T PRK09133 195 DAEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLN 269 (472)
T ss_pred CeEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccC
Confidence 3466655 3221 122211 122455799999999999999999986 5899999999999998642100
Q ss_pred ---------------------------------------CCC----CCCcEEEEEEeecCcccccccCcEEEEEEEeCCC
Q 013395 271 ---------------------------------------IDP----LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFN 307 (444)
Q Consensus 271 ---------------------------------------~~~----~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~ 307 (444)
.++ ...+|++++.|+||...|+||++|++.+|+|+.|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p 349 (472)
T PRK09133 270 DVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFP 349 (472)
T ss_pred CccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCC
Confidence 000 1356999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHh-CCcccccCCCCCcCcHHHHH
Q 013395 308 KKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL-GEENVKLAPIFTGSEDFAFF 386 (444)
Q Consensus 308 ~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~ 386 (444)
+++.+++.++|+++++. . .++++.... ..+.++.+.+.++++.+++++++++ |.++. +..++|++|++++
T Consensus 350 ~~~~e~v~~~I~~~i~~----~--~v~v~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~--~~~~~ggtDa~~~ 420 (472)
T PRK09133 350 GDTIEAVRATLKQVVAD----P--AIKITRIGD-PSPSPASPLRPDIMKAVEKLTAAMWPGVPVI--PSMSTGATDGRYL 420 (472)
T ss_pred chhHHHHHHHHHHHhcC----C--CEEEEEccC-CCCCCCCCCCcHHHHHHHHHHHHHCCCCcee--ccccccccchHHH
Confidence 99999999999998754 2 344443211 1223355667889999999999987 55432 3467899999999
Q ss_pred HHH-cCCcEE--EeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 387 LDE-IPGSFL--LLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 387 ~~~-~p~~~~--~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
... +|++.+ .+|+ +....+|++||||+++++.+++++|+.++.++++
T Consensus 421 ~~~gip~~~~~~i~gp-----~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 421 RAAGIPTYGVSGLFGD-----PDDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred HhcCCCceeecCcccC-----cccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 875 786321 1332 3346799999999999999999999999998875
No 25
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=7.7e-48 Score=384.74 Aligned_cols=348 Identities=19% Similarity=0.275 Sum_probs=275.8
Q ss_pred HHHHHHHHHHhcCCCCCcch-------HHHHHHHHHHHHHcCCceecc-----CCCceEEEEeCCCCCcEEEEEeccCcc
Q 013395 60 NWMKKMRRQIHENPELAYEE-------FETSELIRRELDQLGIAYRWP-----VAKTGVVATVGSGSPPFVALRADMDAL 127 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e-------~~~~~~i~~~l~~~g~~~~~~-----~~~~n~~~~~~~~~~~~ill~~H~D~v 127 (444)
+.++++++++++|||.+++| .++++||+++|+++|++++.. .+++|++++++++ .++|+|+||+|||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 46889999999999999875 579999999999999997633 1467999999543 4689999999999
Q ss_pred CCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccc
Q 013395 128 PIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLE 199 (444)
Q Consensus 128 p~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~ 199 (444)
|+++ .+|+.+| ++||++||||+ |++++++|.|++.|++. .++++|.|+|++|||.|+ |++++++++.+
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~- 159 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAI- 159 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCC-
Confidence 9865 4698887 46899999995 99999999999999875 467899999999999884 99999987544
Q ss_pred ccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----cCCC--
Q 013395 200 NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR----EIDP-- 273 (444)
Q Consensus 200 ~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~----~~~~-- 273 (444)
+.|.+++.+ |++.. +....+|..+++|+++|+++|||.|+.|.||+..+++++..++.+... ...+
T Consensus 160 ~~d~~i~~e-----p~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 160 RPDCAIIGE-----PTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred CCCEEEEcC-----CCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 346666532 32211 112335999999999999999999999999999999999999876421 1111
Q ss_pred -CCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCC--ccC
Q 013395 274 -LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP--TMN 350 (444)
Q Consensus 274 -~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~ 350 (444)
...+|++++.++||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..++++++++... ...|+ .+.
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 308 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPLH---PPIPGYECPA 308 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeccc---cCCCCcCCCC
Confidence 135799999999999999999999999999999999999999999999998877777777665321 22333 345
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013395 351 DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIH 429 (444)
Q Consensus 351 d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~ 429 (444)
++++++.+.+++ |.++ ...++++|+.++... +|++. +|++ ...++|++||+++++++.+++++|
T Consensus 309 ~~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g-----~~~~~H~~~E~v~~~~l~~~~~i~ 373 (383)
T PRK05111 309 DHQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLV--LGPG-----SIEQAHQPDEYLELSFIKPTRELL 373 (383)
T ss_pred CCHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEE--ECCC-----chHhCcCCCCcccHHHHHHHHHHH
Confidence 667888776543 5543 234677998887664 66644 5663 235699999999999999999999
Q ss_pred HHHHHHHhh
Q 013395 430 AAFAHSYLV 438 (444)
Q Consensus 430 ~~~l~~~~~ 438 (444)
+.++.+++.
T Consensus 374 ~~~~~~~~~ 382 (383)
T PRK05111 374 RQLIHHFCL 382 (383)
T ss_pred HHHHHHHhc
Confidence 999998864
No 26
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-48 Score=392.61 Aligned_cols=365 Identities=18% Similarity=0.194 Sum_probs=274.7
Q ss_pred hHHHHHHHHHHHhcCCCCCc------chHHHHHHHHHHHHHcCCc-eec--cCCCceEEEEe-CCCCCcEEEEEeccCcc
Q 013395 58 TVNWMKKMRRQIHENPELAY------EEFETSELIRRELDQLGIA-YRW--PVAKTGVVATV-GSGSPPFVALRADMDAL 127 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~------~e~~~~~~i~~~l~~~g~~-~~~--~~~~~n~~~~~-~~~~~~~ill~~H~D~v 127 (444)
..++++++++++++|||.++ +|.++++||+++|+++|++ ++. ..+++||++.+ +++++|+|+|+||+|||
T Consensus 12 ~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~~lll~gH~DvV 91 (456)
T PRK08201 12 RREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKPTVLIYGHYDVQ 91 (456)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCCEEEEEeccCCc
Confidence 45788999999999999985 4678999999999999997 432 23578999988 44456899999999999
Q ss_pred CCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccc-
Q 013395 128 PIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL- 198 (444)
Q Consensus 128 p~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~- 198 (444)
|+++...|+++| ++||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |+..++++...
T Consensus 92 p~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 171 (456)
T PRK08201 92 PVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEKDK 171 (456)
T ss_pred CCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhHHh
Confidence 998766899987 56899999995 9999999999999988766788999999999999985 88887765311
Q ss_pred cccceeEEecccCCCCCc-eeeeccCcccccceeEEEEEEecCC--CCCCCCC-CCCHHHHHHHHHHHHHHhhccc----
Q 013395 199 ENVEAIFGLHLVHKYPTG-VVASRPGDFLAGCGSFKAKISGKGG--HAAIPQH-CIDPILAVSSSVISLQNIVSRE---- 270 (444)
Q Consensus 199 ~~~d~~~~~~~~~~~~~g-~v~~~~g~~~~G~~~~~i~v~G~~~--Hss~p~~-g~nai~~~~~~l~~l~~~~~~~---- 270 (444)
-+.|++++.++....+.. .+ ...++|..+++|+++|+++ |||.|.. +.|||..+++++.+|++...+.
T Consensus 172 ~~~d~~ii~e~~~~~~~~~~i----~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~ 247 (456)
T PRK08201 172 LAADVVLISDTTLLGPGKPAI----CYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVAVEG 247 (456)
T ss_pred ccCCEEEEeCCCcCCCCCEEE----EEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEecCC
Confidence 135777766432211111 12 2345699999999999998 9987554 4799999999999997632110
Q ss_pred -------------------------------CCC-------------CCCcEEEEEEeecCcc----cccccCcEEEEEE
Q 013395 271 -------------------------------IDP-------------LDSQVVSVAMINGGSS----YNMIPDSATVAGT 302 (444)
Q Consensus 271 -------------------------------~~~-------------~~~~t~~v~~i~gG~~----~nviP~~a~~~~d 302 (444)
... ...+|++++.++||.. .|+||++|++.+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~d 327 (456)
T PRK08201 248 FYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKIT 327 (456)
T ss_pred cccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEE
Confidence 000 0135899999988743 7999999999999
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCc-
Q 013395 303 FRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSE- 381 (444)
Q Consensus 303 iR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~t- 381 (444)
+|+.|+++.+++.+.|++++++.. ..+.++++.... ..+++ .++.++++++.+.+++++.+|.++.. ...+++.
T Consensus 328 iR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~l~~a~~~~~g~~~~~--~~~gg~~~ 402 (456)
T PRK08201 328 CRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFD-KGPAF-VAPIDHPAIQAAARAYEAVYGTEAAF--TRMGGSIP 402 (456)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECC-CcCce-ecCCCCHHHHHHHHHHHHHhCCCcee--cCCCCcHH
Confidence 999999999999999999987531 233344443221 11222 34567789999999999998887542 2333433
Q ss_pred -HHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 382 -DFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 382 -D~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
|..++... +|++. +|++.. ..++|++||||+++++.+++++|+.++.++.
T Consensus 403 ~~~~~~~~~gip~v~--~GpG~~----~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 403 VVETFSSQLHIPIVL--MGFGLP----SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred HHHHHHHHhCCCEEE--ecCCCC----CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 45444433 78654 566432 2569999999999999999999999998773
No 27
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-47 Score=388.94 Aligned_cols=362 Identities=19% Similarity=0.217 Sum_probs=277.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcc------hHHHHHHHHHHHHHcCC-ceecc--CCCceEEEEeC-CCCCcEEEEEeccCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYE------EFETSELIRRELDQLGI-AYRWP--VAKTGVVATVG-SGSPPFVALRADMDAL 127 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~------e~~~~~~i~~~l~~~g~-~~~~~--~~~~n~~~~~~-~~~~~~ill~~H~D~v 127 (444)
..++++++++++++|||.+++ |.++++||.++|+++|+ +++.. ++++|++++++ +.++|+|+|+||+|||
T Consensus 16 ~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~~lll~gH~DvV 95 (449)
T PRK07907 16 LLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAPTVLLYAHHDVQ 95 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCCEEEEEcccCCC
Confidence 567889999999999999863 67899999999999998 66643 46889999994 3346899999999999
Q ss_pred CCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccc-c
Q 013395 128 PIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV-L 198 (444)
Q Consensus 128 p~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~-~ 198 (444)
|+++..+|+++| ++||+|||||+ |++++++|.|+++| +..++++|.|++++|||.|+ |++++++... .
T Consensus 96 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 172 (449)
T PRK07907 96 PPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLERLLAEHPDL 172 (449)
T ss_pred CCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHHHHHHhchHh
Confidence 998777899988 46899999995 99999999999999 34577899999999999985 8888887631 1
Q ss_pred cccceeEEecccCC---CCCceeeeccCcccccceeEEEEEE--ecCCCCCC-CCCCCCHHHHHHHHHHHHHHhhccc--
Q 013395 199 ENVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKIS--GKGGHAAI-PQHCIDPILAVSSSVISLQNIVSRE-- 270 (444)
Q Consensus 199 ~~~d~~~~~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~--G~~~Hss~-p~~g~nai~~~~~~l~~l~~~~~~~-- 270 (444)
-+.|++++.++... +|... ..++|..+++++++ |+++|||. +..+.||+..+++++.+|++...+.
T Consensus 173 ~~~d~~iv~E~~~~~~~~p~i~------~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~~~~ 246 (449)
T PRK07907 173 LAADVIVIADSGNWSVGVPALT------TSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGNVAV 246 (449)
T ss_pred hcCCEEEEecCCcCCCCCeEEE------EecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCCEeC
Confidence 24577776643221 11112 23469999999998 89999997 4668899999999999998642210
Q ss_pred -----CCC---------------------------------CCCcEEEEEEeec---CcccccccCcEEEEEEEeCCChh
Q 013395 271 -----IDP---------------------------------LDSQVVSVAMING---GSSYNMIPDSATVAGTFRAFNKK 309 (444)
Q Consensus 271 -----~~~---------------------------------~~~~t~~v~~i~g---G~~~nviP~~a~~~~diR~~~~~ 309 (444)
..+ ...++++++.|++ |...|+||++|++++|+|+.|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~ 326 (449)
T PRK07907 247 DGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVAPGQ 326 (449)
T ss_pred CCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcCCCC
Confidence 000 1245899999986 46889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHH-HHHHH
Q 013395 310 RFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDF-AFFLD 388 (444)
Q Consensus 310 ~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~ 388 (444)
+.+++.+.|++++++. ..++.++++++.. ..+++ .++.++++++.+++++++.+|.++.. ...+|+++. +.|.+
T Consensus 327 ~~e~v~~~l~~~l~~~-~~~~~~~~~~~~~-~~~p~-~~~~~~~~~~~l~~a~~~~~g~~~~~--~~~~g~~~~~~~~~~ 401 (449)
T PRK07907 327 DAAEAQDALVAHLEAH-APWGAHVTVERGD-AGQPF-AADASGPAYDAARAAMREAWGKDPVD--MGMGGSIPFIAELQE 401 (449)
T ss_pred CHHHHHHHHHHHHHhc-CCCCcEEEEEECC-CcCce-eCCCCCHHHHHHHHHHHHHhCCCcee--cCCCCcHHHHHHHHH
Confidence 9999999999998763 2234556665431 11232 34567889999999999999987643 345555553 44554
Q ss_pred HcCC-cEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 389 EIPG-SFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 389 ~~p~-~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
..+. .+..+|+++.+ .++|++||+|+++++.+++++|+.++..+-
T Consensus 402 ~~~~~~~v~~Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 402 AFPQAEILVTGVEDPK----TRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred hcCCCcEEEeccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 4432 23346764321 579999999999999999999999998873
No 28
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=3.7e-48 Score=384.52 Aligned_cols=339 Identities=19% Similarity=0.295 Sum_probs=269.0
Q ss_pred HHHHHhcCCCCCcch-HHHHHHHHHHHHHcCCceeccC-----CCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCccc
Q 013395 65 MRRQIHENPELAYEE-FETSELIRRELDQLGIAYRWPV-----AKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (444)
Q Consensus 65 l~~~~~~~ps~s~~e-~~~~~~i~~~l~~~g~~~~~~~-----~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~ 138 (444)
+++++++|||.++++ .++++||.++|+++|++++..+ +++|++++++++++|+|+|+||+||||+++ +.|+++
T Consensus 2 ~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~~ 80 (364)
T TIGR01892 2 ILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTRD 80 (364)
T ss_pred hHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCCC
Confidence 578899999999865 7999999999999999987432 368999999543468999999999999876 489887
Q ss_pred C----cCCCccccCc---chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEeccc
Q 013395 139 S----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLV 210 (444)
Q Consensus 139 p----~~~g~i~grG---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~ 210 (444)
| ++||++|||| ||++++++|.|+++|++. .++++|.|+|++|||.| .|++++++++. .+.|.+++.
T Consensus 81 Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~-~~~d~~i~~--- 154 (364)
T TIGR01892 81 PFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGA-GRPRHAIIG--- 154 (364)
T ss_pred CCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcC-CCCCEEEEC---
Confidence 7 5689999999 599999999999999875 46889999999999988 59999998864 246766653
Q ss_pred CCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CC--CCCcEEEEEE
Q 013395 211 HKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-----DP--LDSQVVSVAM 283 (444)
Q Consensus 211 ~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~-----~~--~~~~t~~v~~ 283 (444)
+|++.... ...+|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... .. ...++++++.
T Consensus 155 --ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (364)
T TIGR01892 155 --EPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGV 229 (364)
T ss_pred --CCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEee
Confidence 33333322 123599999999999999999999999999999999999987642211 01 1246999999
Q ss_pred eecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHH-hhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHH
Q 013395 284 INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAA-VHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVT 362 (444)
Q Consensus 284 i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 362 (444)
++||...|+||++|++.+|+|++|+++.+++.++|+++++..+. .+++++++++.. ..+++ ..+.++++++.+.++
T Consensus 230 i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~~~~~~~v~~~~~~- 306 (364)
T TIGR01892 230 IQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVS-TDPGV-NTEPDAELVAFLEEL- 306 (364)
T ss_pred eecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEcc-CCCCc-CCCCCCHHHHHHHHH-
Confidence 99999999999999999999999999999999999999987643 456666666531 11222 234567788887654
Q ss_pred HHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013395 363 AEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAF 432 (444)
Q Consensus 363 ~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~ 432 (444)
++.++ ...++++|++++... +|++. +|+ |+...+|++||+++++++.+++++|+.+
T Consensus 307 ---~~~~~----~~~~~~tD~~~~~~~gip~v~--~Gp-----g~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 307 ---SGNAP----EVVSYGTEAPQFQELGAEAVV--CGP-----GDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred ---hCCCC----ceecccccHHHHHhCCCcEEE--ECC-----CChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 35432 235668999999875 88643 565 3335799999999999999999999876
No 29
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.1e-46 Score=384.91 Aligned_cols=365 Identities=17% Similarity=0.192 Sum_probs=278.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcch------HHHHHHHHHHHHHcCCceecc--CCCceEEEEe-CCC-CCcEEEEEeccCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEE------FETSELIRRELDQLGIAYRWP--VAKTGVVATV-GSG-SPPFVALRADMDAL 127 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e------~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~-~~~-~~~~ill~~H~D~v 127 (444)
..++++++++++++|||.++++ .++++||+++|+++|++++.. .+++||++++ +++ .+|+|+|+||+|||
T Consensus 15 ~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~lll~gH~DvV 94 (464)
T PRK09104 15 NLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHVLFYGHYDVQ 94 (464)
T ss_pred hHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEEEEEecccCC
Confidence 4678889999999999999754 688999999999999998742 3578999999 433 46999999999999
Q ss_pred CCcCCCCCcccCc----CCC-----ccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhh
Q 013395 128 PIQELVEWEHKSK----IDG-----KMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQ 194 (444)
Q Consensus 128 p~~~~~~w~~~p~----~~g-----~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~ 194 (444)
|+++.++|+++|. ++| ++||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |...+++
T Consensus 95 p~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~ 174 (464)
T PRK09104 95 PVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGSPSLVPFLE 174 (464)
T ss_pred CCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCCccHHHHHH
Confidence 9987778999883 233 5999995 9999999999999999877788999999999999985 7777776
Q ss_pred cccc-cccceeEEecccCCCC-CceeeeccCcccccceeEEEEEEe--cCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcc
Q 013395 195 EGVL-ENVEAIFGLHLVHKYP-TGVVASRPGDFLAGCGSFKAKISG--KGGHAAI-PQHCIDPILAVSSSVISLQNIVSR 269 (444)
Q Consensus 195 ~~~~-~~~d~~~~~~~~~~~~-~g~v~~~~g~~~~G~~~~~i~v~G--~~~Hss~-p~~g~nai~~~~~~l~~l~~~~~~ 269 (444)
+... ...|++++.++....+ ...+. ..++|.++++|+++| +++|||. |+.+.||+..+++++.+|++...+
T Consensus 175 ~~~~~~~~d~~iv~E~~~~~~~~~~i~----~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~~~~ 250 (464)
T PRK09104 175 ANAEELKADVALVCDTGMWDRETPAIT----TSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDETGR 250 (464)
T ss_pred hhHHhcCCCEEEEeCCCCCCCCCeEEE----eecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCCCCC
Confidence 5321 2468887765321111 11221 334699999999999 6899996 688999999999999999763211
Q ss_pred cC------------------------------------CC------------CCCcEEEEEEeecCc----ccccccCcE
Q 013395 270 EI------------------------------------DP------------LDSQVVSVAMINGGS----SYNMIPDSA 297 (444)
Q Consensus 270 ~~------------------------------------~~------------~~~~t~~v~~i~gG~----~~nviP~~a 297 (444)
.. .+ ...+|+|++.++||. ..|+||++|
T Consensus 251 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~nvvP~~~ 330 (464)
T PRK09104 251 VTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEGFKTVIPAEA 330 (464)
T ss_pred EeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCCCccEecCce
Confidence 00 00 013689999999985 469999999
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCC
Q 013395 298 TVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIF 377 (444)
Q Consensus 298 ~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~ 377 (444)
++.+|+|++|+++++++.+.|++++++.. ..+.++++.... ..+...++.++++++.+.+++++.++.++.. ...
T Consensus 331 ~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~--~~~ 405 (464)
T PRK09104 331 SAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHG--GSPAIALPYDSPALAAAKAALSDEWGKPAVL--IGS 405 (464)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecC--CCCceECCCCCHHHHHHHHHHHHHhCCCcee--cCC
Confidence 99999999999999999999999987521 123334333221 1222245668889999999999998887543 345
Q ss_pred CcCc-HHHHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 378 TGSE-DFAFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 378 ~g~t-D~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
+|++ |++.|.+. +|++. +|++.. ...+|++||+|+++++.+++++|+.++.+++
T Consensus 406 ~g~~~~~~~~~~~~gip~v~--~g~G~~----~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 406 GGSIPIVGDFKRILGMDSLL--VGFGLD----DDRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred CCcHHHHHHHHHHhCCCEEE--ecCCCC----CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 5554 45676653 77654 455321 1569999999999999999999999999876
No 30
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.4e-46 Score=370.30 Aligned_cols=334 Identities=14% Similarity=0.145 Sum_probs=266.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
..++++++++++++|||++++|.++++|+.++|+++|++++..+ .+|++. .+ .|+|+|+||+||||. |..
T Consensus 8 ~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~-~g---~~~lll~gH~DtVp~-----~~~ 77 (346)
T PRK00466 8 VKQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI-LG---EGDILLASHVDTVPG-----YIE 77 (346)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe-cC---CCeEEEEeccccCCC-----CCC
Confidence 44778889999999999999999999999999999999987643 456553 22 368999999999994 334
Q ss_pred cCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCC
Q 013395 138 KSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKY 213 (444)
Q Consensus 138 ~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (444)
++++||+|||||+ |++++++|.|+++|++.+ .++.|+|++|||.|+ |++++++++. ++|++++.+ |..
T Consensus 78 ~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~e--p~~ 149 (346)
T PRK00466 78 PKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGE--PSN 149 (346)
T ss_pred ceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcC--CCC
Confidence 4578899999995 999999999999998865 358999999999884 9999988753 568777653 221
Q ss_pred CCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccc
Q 013395 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (444)
Q Consensus 214 ~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nvi 293 (444)
. ..+. ...+|..+++|+++|+++|+|.|+ .||+..+++++.+|.+... .....+++++.++||.+.|+|
T Consensus 150 ~-~~i~----~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~Nvv 218 (346)
T PRK00466 150 G-TDIV----VEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVT 218 (346)
T ss_pred C-CceE----EEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCccc
Confidence 1 1121 224599999999999999999875 5999999999999977522 223468999999999999999
Q ss_pred cCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccccc
Q 013395 294 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL 373 (444)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~ 373 (444)
|++|++.+|+|+.|+.+.+++.++|++.+++ ++ ++... ..+++ .++.++++++.+.+++++. |.++.
T Consensus 219 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~--~~~~~-~~~~~-~~~~~~~lv~~l~~a~~~~-g~~~~-- 285 (346)
T PRK00466 219 PAKLYLHFDVRYAINNKRDDLISEIKDKFQE------CG--LKIVD-ETPPV-KVSINNPVVKALMRALLKQ-NIKPR-- 285 (346)
T ss_pred CCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------Cc--Eeecc-CCCCc-ccCCCCHHHHHHHHHHHHh-CCCce--
Confidence 9999999999999999999999999988764 23 33221 11222 3455688999999999985 77643
Q ss_pred CCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 374 APIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 374 ~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
+...+|++|+++|.+..|.++ .+|| |....+|++|||++++++.+++++|+.++.+++++
T Consensus 286 ~~~~~g~tD~~~~~~~~~~~v-~fGp-----g~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 286 LVRKAGTSDMNILQKITTSIA-TYGP-----GNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred EEecCCcCcHHHHHHhCCCEE-EECC-----CCcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 346788999999988755433 4676 44467999999999999999999999999998875
No 31
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=4.4e-46 Score=369.76 Aligned_cols=348 Identities=18% Similarity=0.189 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHhcCCCCCcchH---HHHHHHHHHHHHcCCceeccCC----CceEEEEeC-CC-CCcEEEEEeccCccCC
Q 013395 59 VNWMKKMRRQIHENPELAYEEF---ETSELIRRELDQLGIAYRWPVA----KTGVVATVG-SG-SPPFVALRADMDALPI 129 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~---~~~~~i~~~l~~~g~~~~~~~~----~~n~~~~~~-~~-~~~~ill~~H~D~vp~ 129 (444)
.++++++++++++|||++++|. ++++|+.++|+++|++++..+. .+|++++++ ++ .+|+|+|+||+||||+
T Consensus 10 ~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~ 89 (376)
T PRK07473 10 SEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHP 89 (376)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCC
Confidence 4678888999999999999885 6778999999999999875432 247999984 32 4689999999999975
Q ss_pred cCCCCCcccC--cCCCccccCc---chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccccccce
Q 013395 130 QELVEWEHKS--KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEA 203 (444)
Q Consensus 130 ~~~~~w~~~p--~~~g~i~grG---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~ 203 (444)
.. .|..+| ++||++|||| ||++++++|.|+++|++.+..++.+|.|+|++|||.|+ |++.+++++.. ..|+
T Consensus 90 ~~--~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~ 166 (376)
T PRK07473 90 VG--TLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKY 166 (376)
T ss_pred CC--CccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCE
Confidence 43 465555 6789999999 59999999999999999887778899999999999985 99999876432 5688
Q ss_pred eEEecccCCCCC-ceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEE
Q 013395 204 IFGLHLVHKYPT-GVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSV 281 (444)
Q Consensus 204 ~~~~~~~~~~~~-g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v 281 (444)
+++.++ +... +.+. ..+|..+++|+++|+++|++ .|+.|.||+..+++++.+|+++.. ...++++
T Consensus 167 ~iv~ep--~~~~~~v~~-----~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~v 233 (376)
T PRK07473 167 VLVPEP--GRPDNGVVT-----GRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSV 233 (376)
T ss_pred EEEeCC--CCCCCCEEE-----ECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeE
Confidence 887653 3222 2222 23599999999999999987 699999999999999999988732 2358999
Q ss_pred EEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHH
Q 013395 282 AMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRV 361 (444)
Q Consensus 282 ~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 361 (444)
+.|+||...|+||++|++.+++|.....+.+++.+++.+.++ ...+.+++++... ..+++.....++++++.++++
T Consensus 234 g~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~ 309 (376)
T PRK07473 234 GIVHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTRGV-TRPVWEPDAGTMALYEKARAI 309 (376)
T ss_pred eeEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEccc-cCCCCCCChhHHHHHHHHHHH
Confidence 999999999999999999999998887777777666665543 2234444443211 112222212234588888777
Q ss_pred HHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 362 TAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 362 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
.+. +|.++. ....+|++|++++... +|++. ++||+. ..+|++|||++++++.+++++|+.++.++
T Consensus 310 ~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~Gpg~------~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 310 AGQ-LGLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLGVRG------ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHH-cCCCCc--cccCccccHhhhHHhcCCCEEE-eccCCC------CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 655 476643 3567899999999875 88754 467643 45899999999999999999999998653
No 32
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.5e-46 Score=370.66 Aligned_cols=338 Identities=18% Similarity=0.123 Sum_probs=269.4
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC--CCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~--~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
+++++++++++++||++++|.++++||.++|+++|++++... +..|+++ +++|+|+|+||+||||++..
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~----- 72 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE----- 72 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC-----
Confidence 467888999999999999999999999999999999987533 2456665 33589999999999997431
Q ss_pred cCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCC
Q 013395 138 KSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKY 213 (444)
Q Consensus 138 ~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (444)
+..+||++||||+ |++++++|.|++.|++. .++++|.|+|++|||.| .|++.+++.. +.|++++.++ +.
T Consensus 73 ~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep--~~ 145 (347)
T PRK08652 73 FFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEP--TD 145 (347)
T ss_pred CEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecC--CC
Confidence 1256899999995 99999999999999864 34679999999999987 4999988762 3477776643 22
Q ss_pred CCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccc
Q 013395 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (444)
Q Consensus 214 ~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nvi 293 (444)
+.+. ...+|..+++|+++|+++|++.|+.|.||+..+++++..|+++........ ..+++++.++||...|+|
T Consensus 146 --~~i~----~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 --LKVA----IAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred --Ccee----eecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CCCCcceeeecCCCCCcc
Confidence 1222 234699999999999999999999999999999999999988643321111 135677789999999999
Q ss_pred cCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccccc
Q 013395 294 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL 373 (444)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~ 373 (444)
|++|++.+|+|+++..+.+++.+++++++++ ++.++++... .+++ +.+.|+++++.+++++++. |.++.
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~---~~~~-~~~~~~~lv~~l~~a~~~~-g~~~~-- 287 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEI---WDGF-ELDEDEEIVQLLEKAMKEV-GLEPE-- 287 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEecc---CCcc-cCCCCCHHHHHHHHHHHHh-CCCCC--
Confidence 9999999999999999999999999998854 3444443321 1333 3456788999999999998 87753
Q ss_pred CCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 374 APIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 374 ~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
+..++|++|++++++. +|++. +||+ +...+|++|||++++++.+++++|..++..++.
T Consensus 288 ~~~~~g~tDa~~~~~~gip~v~--~Gpg-----~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 288 FTVMRSWTDAINFRYNGTKTVV--WGPG-----ELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCcCCccchhHHHHHCCCCEEE--ECCC-----chhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 3567888999999875 88753 5753 335799999999999999999999999998875
No 33
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-47 Score=381.93 Aligned_cols=357 Identities=17% Similarity=0.216 Sum_probs=266.9
Q ss_pred HHHHHHHhcCCCCC------cchHHHHHHHHHHHHHcCCceeccC---CCceEEEEe-CCCC-CcEEEEEeccCccCCcC
Q 013395 63 KKMRRQIHENPELA------YEEFETSELIRRELDQLGIAYRWPV---AKTGVVATV-GSGS-PPFVALRADMDALPIQE 131 (444)
Q Consensus 63 ~~l~~~~~~~ps~s------~~e~~~~~~i~~~l~~~g~~~~~~~---~~~n~~~~~-~~~~-~~~ill~~H~D~vp~~~ 131 (444)
+++++++++|||.+ ++|.++++|+.++|+++|++++..+ +++|+++++ ++++ .|+|+|++|+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 56789999999988 6789999999999999999987543 578999999 5443 48999999999999865
Q ss_pred CCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhcc--cccc
Q 013395 132 LVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEG--VLEN 200 (444)
Q Consensus 132 ~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~--~~~~ 200 (444)
++|+++| ++||++||||+ |++++++|+|+++|++.+..++++|.|+|++|||.|+ |++.+++.. .+..
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 4799988 46899999995 9999999999999999988899999999999999973 899887653 1222
Q ss_pred cceeEEecccCC---CCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-------
Q 013395 201 VEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE------- 270 (444)
Q Consensus 201 ~d~~~~~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~------- 270 (444)
.+.+++ ++.+. .+...........++|..+++|+++|+++|+|.|+. .|||..+++++.+|++...+.
T Consensus 161 ~~~ii~-e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 238 (426)
T PRK07906 161 VTEAIS-EVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVR 238 (426)
T ss_pred hheEEE-CCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHH
Confidence 333332 21110 011100011223457999999999999999999875 999999999999997542110
Q ss_pred -------------CCCC-------------------CCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHH
Q 013395 271 -------------IDPL-------------------DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERI 318 (444)
Q Consensus 271 -------------~~~~-------------------~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i 318 (444)
.++. ..+|++++.|+||.+.|+||++|++.+|+|+.|+++ +++.+.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i 317 (426)
T PRK07906 239 AFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATV 317 (426)
T ss_pred HHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHH
Confidence 0000 135999999999999999999999999999999986 6666666
Q ss_pred HHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCC-cccccCCCCCcCcHHHHHHHH-cCCcEEE
Q 013395 319 EEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGE-ENVKLAPIFTGSEDFAFFLDE-IPGSFLL 396 (444)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~-~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 396 (444)
++++. ..+++++.. ..+++ .++.++++++.+++++++.++. .+. +...+|+||++++... +|++ .
T Consensus 318 ~~~~~-------~~v~~~~~~-~~~~~-~~~~~~~~v~~l~~a~~~~~~~~~~~--~~~~~ggtDa~~~~~~g~p~~--~ 384 (426)
T PRK07906 318 DELLG-------PDVEREWVH-RDPAL-ETPFDGPLVDAMNAALLAEDPGARVV--PYMLSGGTDAKAFSRLGIRCY--G 384 (426)
T ss_pred HHHhC-------CCeEEEEec-CCCCC-CCCCCcHHHHHHHHHHHHHCCCCeEe--eeeecccCcHHHHHhcCCceE--E
Confidence 66542 235555432 12232 3456788999999999988532 222 2456788999999875 6653 3
Q ss_pred eccCCCCCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 397 LGMLNDSVG--SLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 397 ~G~~~~~pg--~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
+||.....| ...++|++||+++++++.+++++|+.++.++
T Consensus 385 ~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~~ 426 (426)
T PRK07906 385 FAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRTC 426 (426)
T ss_pred EeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHhC
Confidence 566431101 1257999999999999999999999998763
No 34
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-45 Score=373.66 Aligned_cols=362 Identities=15% Similarity=0.104 Sum_probs=271.0
Q ss_pred HHHHHHHHHHhcCCCCCcc---hHHHHHHHH----HHHHHcCCceecc-----CCCceEEEEeC-CCCCcEEEEEeccCc
Q 013395 60 NWMKKMRRQIHENPELAYE---EFETSELIR----RELDQLGIAYRWP-----VAKTGVVATVG-SGSPPFVALRADMDA 126 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~---e~~~~~~i~----~~l~~~g~~~~~~-----~~~~n~~~~~~-~~~~~~ill~~H~D~ 126 (444)
++++++++++++|||.+++ +.++++|+. ++|+++|++++.. .+++||++.++ ++++|+|+|+||+||
T Consensus 17 ~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~~~~~lll~gH~Dv 96 (469)
T PRK07079 17 GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDDALPTVLIYGHGDV 96 (469)
T ss_pred HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCCCCCEEEEEcccCC
Confidence 4788999999999999874 356676664 5899999998742 24689999984 344689999999999
Q ss_pred cCCcCCCCCc--ccC----cCCCccccCcc---hHHHHHHHHHHHHHHhc-cccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 127 LPIQELVEWE--HKS----KIDGKMHACGH---DAHVAMLLGAAKILQEM-RETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 127 vp~~~~~~w~--~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
||+++ +.|+ ++| ++||++||||+ |++++++|.|+++|++. +..++++|.|+|++|||.|+ |+++++++
T Consensus 97 Vp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~ 175 (469)
T PRK07079 97 VRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQ 175 (469)
T ss_pred CCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCCccHHHHHHH
Confidence 99753 5698 366 67899999995 99999999999998754 46789999999999999985 99999876
Q ss_pred ccc-cccceeEEecccCCCCCc-eeeeccCcccccceeEEEEEEec--CCCCCCCCCC--CCHHHHHHHHHHHHHHhhcc
Q 013395 196 GVL-ENVEAIFGLHLVHKYPTG-VVASRPGDFLAGCGSFKAKISGK--GGHAAIPQHC--IDPILAVSSSVISLQNIVSR 269 (444)
Q Consensus 196 ~~~-~~~d~~~~~~~~~~~~~g-~v~~~~g~~~~G~~~~~i~v~G~--~~Hss~p~~g--~nai~~~~~~l~~l~~~~~~ 269 (444)
+.. -+.|++++.++....+.. .+ ...++|.++++|+++|+ +.||+. +.| .||+..+++++.++.+...+
T Consensus 176 ~~~~~~~d~~iv~e~~~~~~~~~~i----~~g~kG~~~~~v~v~G~~~~~hs~~-~~g~~~nai~~l~~ai~~l~~~~~~ 250 (469)
T PRK07079 176 HREALAADVLIASDGPRLSAERPTL----FLGSRGAVNFRLRVNLRDGAHHSGN-WGGLLRNPGTVLAHAIASLVDARGR 250 (469)
T ss_pred hHHhcCCCEEEEeCCCccCCCCeEE----EEecceEEEEEEEEeeCCCCCCCCc-cccccCCHHHHHHHHHHHhCCCCCC
Confidence 421 146887765432111111 11 13346999999999997 456664 333 69999999999998542110
Q ss_pred c------------------------C--------------------CCCCCcEEEEEEeecCc---ccccccCcEEEEEE
Q 013395 270 E------------------------I--------------------DPLDSQVVSVAMINGGS---SYNMIPDSATVAGT 302 (444)
Q Consensus 270 ~------------------------~--------------------~~~~~~t~~v~~i~gG~---~~nviP~~a~~~~d 302 (444)
. . .....+|+|++.|+||. ..|+||++|++.+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~NvVP~~a~~~vd 330 (469)
T PRK07079 251 IQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNAIPGSARAVCQ 330 (469)
T ss_pred EecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceEecCceEEEEE
Confidence 0 0 00123589999999994 68999999999999
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcH
Q 013395 303 FRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSED 382 (444)
Q Consensus 303 iR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD 382 (444)
+|++|+++.+++.++|++++++.. ...+++++.. ..+++ .++.++++++.+.+++++.+|.++.. ....+|++|
T Consensus 331 iR~~P~~~~e~v~~~l~~~i~~~~---~~~v~~~~~~-~~~p~-~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d 404 (469)
T PRK07079 331 LRFVVGTDWENLAPHLRAHLDAHG---FPMVEVTVER-GSPAT-RLDPDDPWVRWALASIARTTGKKPAL-LPNLGGSLP 404 (469)
T ss_pred EEcCCCCCHHHHHHHHHHHHHhcC---CCCeEEEEeC-CCCce-ecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCcchh
Confidence 999999999999999999987631 1134555432 11222 24567889999999999988876432 234577789
Q ss_pred HHHHHH--HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 383 FAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 383 ~~~~~~--~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
.++|.. .+|+++ +|++.+ | ..+|++||||+++++.+++++|+.++.++++.
T Consensus 405 ~~~~~~~~giP~v~--~g~~~~--~--~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 405 NDVFADILGLPTLW--VPHSYP--A--CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred HHHHHHHhCCCEEE--ecCCCC--C--ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 888875 388763 454432 2 35799999999999999999999999999864
No 35
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.8e-45 Score=364.73 Aligned_cols=340 Identities=19% Similarity=0.207 Sum_probs=274.4
Q ss_pred HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC------CCceEEEEe-CCCCCcEEEEEeccCccCCcCCCC
Q 013395 62 MKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTGVVATV-GSGSPPFVALRADMDALPIQELVE 134 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~------~~~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~~ 134 (444)
++++++++++|||.+++|.++++||+++|+++|++++... +++|+++.+ +++++|+|+|.||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 5678999999999999999999999999999999987543 378999999 444458999999999999754 3
Q ss_pred CcccCcCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEE
Q 013395 135 WEHKSKIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFG 206 (444)
Q Consensus 135 w~~~p~~~g~i~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~ 206 (444)
|. +.+++|++||||+ |++++++|.+++.|++.+ .++++|.|+|++|||.|+ |++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 43 2257789999983 699999999999998876 578899999999999884 9888765422 3455555
Q ss_pred ecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEee
Q 013395 207 LHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMIN 285 (444)
Q Consensus 207 ~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~ 285 (444)
++ ++.+.+.+... .+|..+++|+++|+++|++ .|+.|+||+..+++++..|+... .....+++++.++
T Consensus 156 ~~--~~~~~~~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LD--APGEVGNIQLA----APTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFS 224 (361)
T ss_pred Ee--CCCCcceEEec----CCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceee
Confidence 43 32233433322 2589999999999999986 69999999999999999886531 1123678999999
Q ss_pred cCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHH
Q 013395 286 GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTA 363 (444)
Q Consensus 286 gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~ 363 (444)
||...|+||++|++.+|+|..+..+.+.+.+++++.++..+..++.++++++. ..++++ +.|+++++.++++++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lv~~l~~a~~ 300 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETR----LIYEGFKIHPQHPLMNIFKKAAK 300 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEE----eccccccCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888788888777653 223333 457789999999998
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 433 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l 433 (444)
+. |.++.. ..++|++|++++... +|++. +|++. ..+|++||+++++++..++++|..++
T Consensus 301 ~~-g~~~~~--~~~~g~tD~~~~~~~giP~v~--~G~g~------~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 301 KI-GLKTSE--IFSGGGSDANVLNEKGVPTVN--LSAGY------VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred Hc-CCCcEE--EecCcccHHHHHhhCCCceEE--ECCCc------ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 84 876532 467899999999875 88765 46532 46999999999999999999999876
No 36
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.9e-45 Score=362.07 Aligned_cols=335 Identities=19% Similarity=0.220 Sum_probs=263.1
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~ 136 (444)
+.+++++++++++++||++++|.++++||+++|+++ |+++... ..|++++++.+.+++|+|+||+||||+.+ .|+
T Consensus 5 ~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~ 80 (352)
T PRK13007 5 LAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLP 80 (352)
T ss_pred hHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCC
Confidence 457889999999999999999999999999999996 8887653 46899999544456899999999999865 233
Q ss_pred ccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC---CChhhhhhcc-cccccceeEEecc
Q 013395 137 HKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG---TGAKDMIQEG-VLENVEAIFGLHL 209 (444)
Q Consensus 137 ~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g---~G~~~~~~~~-~~~~~d~~~~~~~ 209 (444)
.. .+||++||||+ |++++++|.|+++|. .++++|.|+|++|||.| .|++.+++.. .+.++|++++.++
T Consensus 81 ~~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep 155 (352)
T PRK13007 81 SR-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEP 155 (352)
T ss_pred cc-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecC
Confidence 22 67899999996 899999999999994 47889999999999986 3888887653 2235788887653
Q ss_pred cCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC---CCCCcEEEEEEeec
Q 013395 210 VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID---PLDSQVVSVAMING 286 (444)
Q Consensus 210 ~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~---~~~~~t~~v~~i~g 286 (444)
... .+. ...+|..+++|+++|+++|||.|+.++||+..+++++.+++++..+... ...+.+++++.++|
T Consensus 156 --~~~--~i~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~g 227 (352)
T PRK13007 156 --TDG--VIE----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISG 227 (352)
T ss_pred --CCC--ceE----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEec
Confidence 221 121 2235999999999999999999999999999999999999886432211 11235899999999
Q ss_pred CcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHh
Q 013395 287 GSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL 366 (444)
Q Consensus 287 G~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 366 (444)
|...|+||++|++.+|+|++|+.+.+++.++|++++.+.+ ++++.. ..++++ ...++++++.+.+++
T Consensus 228 G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-------~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---- 294 (352)
T PRK13007 228 GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-------EVEVTD-LAPGAR-PGLDHPAAAALVAAV---- 294 (352)
T ss_pred CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-------EEEeec-ccCCCC-CCCCCHHHHHHHHHh----
Confidence 9999999999999999999999999999999999876422 344321 123333 334677888877763
Q ss_pred CCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013395 367 GEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 433 (444)
Q Consensus 367 g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l 433 (444)
|.++ ....|++|.+.+... +|++. +|+ |...++|++||+++++++.+++++|+.++
T Consensus 295 g~~~----~~~~g~td~~~~~~~Gip~v~--~Gp-----g~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 295 GGEV----RAKYGWTDVARFSALGIPAVN--FGP-----GDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CCCC----ccccccchHHHHHhCCCCEEE--eCC-----CchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 5443 345788999998875 88654 565 44467999999999999999999999876
No 37
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=4e-45 Score=359.99 Aligned_cols=335 Identities=15% Similarity=0.115 Sum_probs=262.1
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCccc
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~ 138 (444)
.++++++++++++|||++++|.++++|+.++|+++|++++.. ...|++++++++ +|+|+|+||+||||... +.
T Consensus 5 ~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~- 77 (348)
T PRK04443 5 ALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVD-EAGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV- 77 (348)
T ss_pred hHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-
Confidence 467888999999999999999999999999999999998754 357899998543 58999999999999532 11
Q ss_pred CcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCCC
Q 013395 139 SKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYP 214 (444)
Q Consensus 139 p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~ 214 (444)
.++||++||||+ |+++++++.|+++| +.+++++|.|++++|||.|+ |...++.++. ++|++++.++.. .
T Consensus 78 ~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~--~ 150 (348)
T PRK04443 78 RVEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSG--W 150 (348)
T ss_pred EeeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCC--c
Confidence 157899999995 99999999999999 34688999999999999985 5555555543 578888764321 1
Q ss_pred CceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc---ccCCCCCCcEEEEEEeecCcccc
Q 013395 215 TGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS---REIDPLDSQVVSVAMINGGSSYN 291 (444)
Q Consensus 215 ~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~---~~~~~~~~~t~~v~~i~gG~~~n 291 (444)
+.+ ...++|..+++|+++|+++|||.| +.||+..+++++..|+++.. .........+++++.++ ...|
T Consensus 151 -~~i----~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n 221 (348)
T PRK04443 151 -DGI----TLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSD 221 (348)
T ss_pred -cce----eeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCC
Confidence 111 123459999999999999999987 78999999999999987643 11122345688898888 3569
Q ss_pred cccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccc
Q 013395 292 MIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENV 371 (444)
Q Consensus 292 viP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~ 371 (444)
+||++|++.+|+|++|+++.+++++.|++++. .+++++.. ..+++ ..+.++++++.+++++++.++.+.
T Consensus 222 ~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~--------~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~- 290 (348)
T PRK04443 222 GLTVEAEMTVGLRLPPGLSPEEAREILDALLP--------TGTVTFTG-AVPAY-MVSKRTPLARAFRVAIREAGGTPR- 290 (348)
T ss_pred CCCceEEEEEEEccCCCCCHHHHHHHHHHhCC--------CcEEEEec-CCCce-ecCCCCHHHHHHHHHHHHhcCCcc-
Confidence 99999999999999999999999999999873 23344321 11333 335577899999999999866432
Q ss_pred ccCCCCCcCcHHHHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 372 KLAPIFTGSEDFAFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 372 ~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
....+|++|+++|.+. +|++ .+|++ +...+|++|||++++++.+++++|+.++.++
T Consensus 291 --~~~~~g~tD~~~~~~~~gip~v--~~Gpg-----~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 291 --LKRKTGTSDMNVVAPAWGCPMV--AYGPG-----DSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred --eeccccCCcHHHHhhhcCCCEE--EECCC-----CccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 2457899999999763 7765 35763 3356899999999999999999999998653
No 38
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=3.5e-45 Score=367.61 Aligned_cols=349 Identities=17% Similarity=0.167 Sum_probs=270.0
Q ss_pred HHHHHHHHhcCCCCCc----------chHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCC-cEEEEEeccCccCC
Q 013395 62 MKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSP-PFVALRADMDALPI 129 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~----------~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~-~~ill~~H~D~vp~ 129 (444)
+++.++++++|||.++ .+.++++||+++|+++|++....++.+||++++ +++++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 4566888999999886 368999999999999999755456788999999 44444 99999999999998
Q ss_pred cCC---------------------CCCccc----C----cCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCc
Q 013395 130 QEL---------------------VEWEHK----S----KIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKG 173 (444)
Q Consensus 130 ~~~---------------------~~w~~~----p----~~~g~i~grG~-------k~~~a~~l~a~~~l~~~~~~~~~ 173 (444)
+.. ..|..+ + .++|++||||+ |++++++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 652 012211 1 24678999884 899999999999998874 4688
Q ss_pred eEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCC-CCCCCC
Q 013395 174 TVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHCID 251 (444)
Q Consensus 174 ~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g~n 251 (444)
+|.|+|++|||.| .|++.++.+++ ..|.+++++. .++.. +.. ..+|..+++|+++|+++|++. |+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~~-i~~----~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELGE-VVY----ENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcce-EEE----ecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 9999999999998 59999876643 3677777653 23433 221 235899999999999999885 888999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhC-
Q 013395 252 PILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHR- 330 (444)
Q Consensus 252 ai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~- 330 (444)
||..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|..+.+++.+.|++++++.++.++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999876433222222346788877764 8999999999999999999999999999999887776
Q ss_pred CceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCC
Q 013395 331 CSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYP 409 (444)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~ 409 (444)
+++++++......+...++.++++++.+++++++. |.++. ....++++|+++|... +|++++ |++. ..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~--GpG~------~~ 375 (404)
T PRK13381 307 ARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNL--FTGA------HN 375 (404)
T ss_pred cEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEE--Cccc------cC
Confidence 56666543111111123456888999999999875 76643 2467899999999865 898765 5532 34
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 410 LHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 410 ~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
+|++||||+++++.+++++|+.++..+.
T Consensus 376 aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 376 FHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988764
No 39
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=3.7e-45 Score=372.37 Aligned_cols=351 Identities=14% Similarity=0.107 Sum_probs=264.4
Q ss_pred hHHHHHHHHHHHhcCCCCCc------------chHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEecc
Q 013395 58 TVNWMKKMRRQIHENPELAY------------EEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADM 124 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~------------~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~ 124 (444)
..++++++++++++|||.+. ++.++++|+.++|+++||+++..+ |.++.+ +++++|+|+|+||+
T Consensus 11 ~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~~~l~~~gH~ 87 (466)
T TIGR01886 11 RKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGDERLGIIGHM 87 (466)
T ss_pred hHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCCCEEEEEeec
Confidence 55788899999999999864 346788999999999999987543 344444 33345899999999
Q ss_pred CccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcc
Q 013395 125 DALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 125 D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (444)
||||+++ +|.++| ++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++|||.|+ |++++++.+
T Consensus 88 DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~ 165 (466)
T TIGR01886 88 DVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHE 165 (466)
T ss_pred ccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcC
Confidence 9999974 699887 57899999995 9999999999999999998899999999999999985 999998864
Q ss_pred cccccceeEEecccCCCC-----Cceeeec-----------------------------------c-----------Ccc
Q 013395 197 VLENVEAIFGLHLVHKYP-----TGVVASR-----------------------------------P-----------GDF 225 (444)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~-----~g~v~~~-----------------------------------~-----------g~~ 225 (444)
. ..|++++.. +..+ .|....+ + ...
T Consensus 166 ~--~~d~~~~~d--~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (466)
T TIGR01886 166 E--TPDFGFSPD--AEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLA 241 (466)
T ss_pred c--CCCEEEECC--CCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHh
Confidence 3 245543321 1111 0000000 0 001
Q ss_pred cccce---------eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHH-------------HHhhc-----------ccCC
Q 013395 226 LAGCG---------SFKAKISGKGGHAAIPQHCIDPILAVSSSVISL-------------QNIVS-----------REID 272 (444)
Q Consensus 226 ~~G~~---------~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l-------------~~~~~-----------~~~~ 272 (444)
++|.. +++|+++|+++|||.|+.|+|||..|++++..+ .+... ....
T Consensus 242 ~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 321 (466)
T TIGR01886 242 DKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDE 321 (466)
T ss_pred hccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCccccc
Confidence 23333 788999999999999999999999999988773 22110 0111
Q ss_pred CCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCH
Q 013395 273 PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDV 352 (444)
Q Consensus 273 ~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~ 352 (444)
.....|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.+.. .+++++......++ ..+.++
T Consensus 322 ~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-------~~~v~~~~~~~~P~-~~~~ds 389 (466)
T TIGR01886 322 LMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-------IVDVTYNGHFEEPH-YVPGSD 389 (466)
T ss_pred CcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-------ccEEEEecccCCCc-ccCCCC
Confidence 24567999999999965 4 899999999999999999999999998764 12333311011232 234567
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013395 353 RIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAF 432 (444)
Q Consensus 353 ~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~ 432 (444)
++++.+.+++++++|.++. +...+|+||+++|...+|... +| ||+...+|++||||+++++.+++++|+.+
T Consensus 390 ~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~g-----PG~~~~aH~~dE~V~i~el~~a~~iy~~~ 460 (466)
T TIGR01886 390 PLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MF-----EGGPDVMHQANEFMMLDDLILAAAIYAEA 460 (466)
T ss_pred HHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--cc-----CCCCCCccCCCcceEHHHHHHHHHHHHHH
Confidence 8999999999999887643 356899999999976554322 23 46667899999999999999999999999
Q ss_pred HHHHhh
Q 013395 433 AHSYLV 438 (444)
Q Consensus 433 l~~~~~ 438 (444)
+.++|.
T Consensus 461 i~~l~~ 466 (466)
T TIGR01886 461 IYELAK 466 (466)
T ss_pred HHHHhC
Confidence 999863
No 40
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=2.9e-45 Score=363.65 Aligned_cols=331 Identities=20% Similarity=0.168 Sum_probs=250.6
Q ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHHcCCc---eeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCC--CCCcccC
Q 013395 65 MRRQIHENPELAYEEFETSELIRRELDQLGIA---YRWPVAKTGVVATVGSGSPPFVALRADMDALPIQEL--VEWEHKS 139 (444)
Q Consensus 65 l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~---~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~--~~w~~~p 139 (444)
++++|++|||.+++|.++++||.++|+++|++ +... ..||+++++++++|+|+|+||+||||+++. ..|+++|
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~--~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p 78 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRF--GDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPG 78 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEE--CCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCc
Confidence 36789999999999999999999999998653 3332 459999985444689999999999998752 3587643
Q ss_pred ------------cCCCccccCcc---hHHHHHHHHHHHHHHh--ccccCCceEEEEEecCCCCC---CChhhhhhccc-c
Q 013395 140 ------------KIDGKMHACGH---DAHVAMLLGAAKILQE--MRETLKGTVVLIFQPAEERG---TGAKDMIQEGV-L 198 (444)
Q Consensus 140 ------------~~~g~i~grG~---k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE~g---~G~~~~~~~~~-~ 198 (444)
++||++||||+ |++++++|.|+++|++ .+..++++|.|+|++|||.| .|+..+++... +
T Consensus 79 ~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~ 158 (373)
T TIGR01900 79 DSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDW 158 (373)
T ss_pred ccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccc
Confidence 46899999996 8999999999999964 35568899999999999985 28888887632 2
Q ss_pred cccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC--CC-CC
Q 013395 199 ENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI--DP-LD 275 (444)
Q Consensus 199 ~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~--~~-~~ 275 (444)
.+.|++++.++ +... + ....+|..+++|+++|+++|+|.|+.|.|||..+++++..|+++..... +. ..
T Consensus 159 ~~~d~~iv~Ep--t~~~--i----~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~ 230 (373)
T TIGR01900 159 LAADFAIIGEP--TGGG--I----EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDY 230 (373)
T ss_pred ccCCEEEEECC--CCCc--c----cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcc
Confidence 35687776542 2211 1 1234699999999999999999999999999999999999988643211 11 12
Q ss_pred CcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH--------HHHh---hC-CceeEEeccCCCC
Q 013395 276 SQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG--------QAAV---HR-CSAEVDFSGREHP 343 (444)
Q Consensus 276 ~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~--------~a~~---~~-~~~~~~~~~~~~~ 343 (444)
..+++++.|+||.+.|+||++|++.+|+|+.|+++.+++.+.|++.++. ..+. .+ ..++++... ..
T Consensus 231 ~~t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 308 (373)
T TIGR01900 231 REGLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMED--EA 308 (373)
T ss_pred cceEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcc--cC
Confidence 3689999999999999999999999999999999999999999765422 2111 11 123343321 01
Q ss_pred CCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCC
Q 013395 344 TLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTID 418 (444)
Q Consensus 344 ~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~ 418 (444)
+....+.++++++.+.++++++++.++. ...|+||+++|... +|++. +|| |+..++|++||||.
T Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gp-----g~~~~aH~~dE~v~ 373 (373)
T TIGR01900 309 GGALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGA-----GDPLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCC-----CChhhccCCCCCCC
Confidence 1112345678999999999998887642 36788999998764 77654 576 44467999999984
No 41
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=6.7e-45 Score=359.31 Aligned_cols=336 Identities=16% Similarity=0.167 Sum_probs=254.2
Q ss_pred hHHHHHHHHHHHhcCCCCC----cchHHHHHHHHHHHHHcCCceeccC---CCceEEEEeCCCCCcEEEEEeccCccCCc
Q 013395 58 TVNWMKKMRRQIHENPELA----YEEFETSELIRRELDQLGIAYRWPV---AKTGVVATVGSGSPPFVALRADMDALPIQ 130 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s----~~e~~~~~~i~~~l~~~g~~~~~~~---~~~n~~~~~~~~~~~~ill~~H~D~vp~~ 130 (444)
..++.+++++++++|||.+ ++|.++++|++++|+ |++++..+ +++|+++..+ +|+|+|+||+||||++
T Consensus 4 ~~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~ 78 (364)
T PRK08737 4 LLESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDS 78 (364)
T ss_pred cHHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCC
Confidence 3457888899999999975 357899999999997 88876432 4679998753 3789999999999986
Q ss_pred CCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhccccccc
Q 013395 131 ELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGVLENV 201 (444)
Q Consensus 131 ~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~~~~~ 201 (444)
+ .|+++| ++||+|||||+ |+++++++.|++. +.++|.|+|++|||.|+ |++.+++.+. +.
T Consensus 79 ~--~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~ 147 (364)
T PRK08737 79 P--HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PY 147 (364)
T ss_pred C--CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CC
Confidence 5 698887 46899999995 8999999999864 35789999999999884 8888887753 56
Q ss_pred ceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhccc----CCCCCC
Q 013395 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QHCIDPILAVSSSVISLQNIVSRE----IDPLDS 276 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p-~~g~nai~~~~~~l~~l~~~~~~~----~~~~~~ 276 (444)
|++++.+ |+..... ..++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+..... ......
T Consensus 148 ~~~iv~E--pt~~~~~------~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~ 219 (364)
T PRK08737 148 EAVLVAE--PTMSEAV------LAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTG 219 (364)
T ss_pred CEEEEcC--CCCceeE------EecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCC
Confidence 7777653 3322112 23459999999999999999997 589999999999998865442111 122335
Q ss_pred cEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCC-HHHH
Q 013395 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMND-VRIY 355 (444)
Q Consensus 277 ~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~ 355 (444)
.+++++.|+||.+.|+||++|++.+|+|+.|+.+.+++.++|+++++. ...+++..+. .+.+++...+ .+++
T Consensus 220 ~t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~ 292 (364)
T PRK08737 220 LRFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFR---GPSLPSGDIARAEER 292 (364)
T ss_pred CceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEec---cCCCCCcccCcchHH
Confidence 699999999999999999999999999999999999999999877653 1223333332 1344444322 3455
Q ss_pred HHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013395 356 QHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAH 434 (444)
Q Consensus 356 ~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~ 434 (444)
..+...+.+..|.+.. ...+++||+++|... +|++. +|| |+...+|++||||+++++.+++++|..++.
T Consensus 293 ~~~~~~~~~~~~~~~~---~~~~~~tDa~~~~~~Gip~v~--~Gp-----G~~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 293 RLAARDVADALDLPIG---NAVDFWTEASLFSAAGYTALV--YGP-----GDIAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHHHHHhhhcCCCC---ceeccccCHHHHHHcCCCEEE--ECC-----CChhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 5554444444465431 345678999999875 88765 476 444679999999999999999999999874
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=363.81 Aligned_cols=365 Identities=22% Similarity=0.293 Sum_probs=278.6
Q ss_pred hHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHcCCceeccC-C----CceEEEEeCCC-CCcEEEEEeccCccCCc
Q 013395 58 TVNWMKKMRRQIHENPELA-YEEFETSELIRRELDQLGIAYRWPV-A----KTGVVATVGSG-SPPFVALRADMDALPIQ 130 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s-~~e~~~~~~i~~~l~~~g~~~~~~~-~----~~n~~~~~~~~-~~~~ill~~H~D~vp~~ 130 (444)
..+++++++++++++||.+ ..+.++++|++++|+++|+.++... + .+|++++++++ ++|+|+|+||+||||++
T Consensus 11 ~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g 90 (409)
T COG0624 11 LLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAG 90 (409)
T ss_pred hhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCC
Confidence 3466678899999999999 8889999999999999999876432 2 46999999544 34999999999999999
Q ss_pred CCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccc---c
Q 013395 131 ELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL---E 199 (444)
Q Consensus 131 ~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~---~ 199 (444)
+..+|+++| +++|+|||||+ ||++++++.|++.|.+.+..++++|.+++++|||+|+ |...++.++.. .
T Consensus 91 ~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~ 170 (409)
T COG0624 91 GGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGI 170 (409)
T ss_pred CcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhcc
Confidence 888899887 45689999996 9999999999999999888899999999999999995 77777766432 3
Q ss_pred ccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCC--CCCCCCH----HHHHHHHHHHHHHhhcccCCC
Q 013395 200 NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI--PQHCIDP----ILAVSSSVISLQNIVSREIDP 273 (444)
Q Consensus 200 ~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~--p~~g~na----i~~~~~~l~~l~~~~~~~~~~ 273 (444)
++|+++..++......+..... ..+|..+++|+++|+++|+|. |+.+.|+ +..+++++..+.+........
T Consensus 171 ~~d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T COG0624 171 RPDYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDG 247 (409)
T ss_pred CCCEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccC
Confidence 5677776643100112221111 346999999999999999998 9999994 455555555444332221110
Q ss_pred CCCcEEEEEEeecC--------cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCC
Q 013395 274 LDSQVVSVAMINGG--------SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTL 345 (444)
Q Consensus 274 ~~~~t~~v~~i~gG--------~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~ 345 (444)
..+++++.+.+| ...|+||++|++.+|+|+.|..+.+++.+.+++.++..+...+.++++... ...+.
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~--~~~~~ 323 (409)
T COG0624 248 --PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPG--LGEPP 323 (409)
T ss_pred --CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccc--cCCcc
Confidence 356666655554 346999999999999999999999999999999998765434444444421 11334
Q ss_pred CCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 346 PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 346 ~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
.+.+.++++++.+++++++.+|.++. ....++++|+.++... +| +..+||+ ..+.+|++|||++++++.+
T Consensus 324 ~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~G~~~da~~~~~~~~~--~~~fgp~-----~~~~~H~~~E~v~i~~l~~ 394 (409)
T COG0624 324 LPVPGDSPLVAALAEAAEELLGLPPE--VSTGGGTHDARFFARLGIP--AVIFGPG-----DIGLAHQPNEYVELEDLVK 394 (409)
T ss_pred ccCCCchHHHHHHHHHHHHhhCCCce--ecCCCCcchHHHHHhcCCe--eEEECCC-----CcccccCCCceeeHHHHHH
Confidence 45567889999999999998787632 3445577898888886 56 3456764 3468999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 013395 425 GAVIHAAFAHSYLV 438 (444)
Q Consensus 425 ~~~~~~~~l~~~~~ 438 (444)
++++|+.++.+++.
T Consensus 395 ~~~~~~~~l~~l~~ 408 (409)
T COG0624 395 GAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 43
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=5.8e-44 Score=359.22 Aligned_cols=354 Identities=17% Similarity=0.151 Sum_probs=272.2
Q ss_pred HHHHHHHHHHhcCCCCCcc----------hHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC--CCcEEEEEeccCc
Q 013395 60 NWMKKMRRQIHENPELAYE----------EFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG--SPPFVALRADMDA 126 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~----------e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~--~~~~ill~~H~D~ 126 (444)
+.+++.++++++|||.+.+ |.++++||+++|+++|++....+..+|+++.+ ++. ++|+|+|+|||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~ 81 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDT 81 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccC
Confidence 4566778899999999866 78999999999999999733344577899999 432 3599999999999
Q ss_pred cCCcCC---------------------CCCcccC--------cCCCccccCc-------chHHHHHHHHHHHHHHhcccc
Q 013395 127 LPIQEL---------------------VEWEHKS--------KIDGKMHACG-------HDAHVAMLLGAAKILQEMRET 170 (444)
Q Consensus 127 vp~~~~---------------------~~w~~~p--------~~~g~i~grG-------~k~~~a~~l~a~~~l~~~~~~ 170 (444)
||+.+. ..|+++| ..+|.+|||| ||++++++|.|+++|++.+..
T Consensus 82 vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~ 161 (408)
T PRK05469 82 APDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEI 161 (408)
T ss_pred CCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCC
Confidence 987431 2355544 1235677766 489999999999999987766
Q ss_pred CCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCC-CCCC
Q 013395 171 LKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHC 249 (444)
Q Consensus 171 ~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~g 249 (444)
++++|.|+|++|||.|.|++.++.+.. ..|..++++. .+.+.+... .+|..+++|+++|+++|++. |+.|
T Consensus 162 ~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~~----~~g~~~~~i~v~Gk~~Ha~~~p~~g 232 (408)
T PRK05469 162 KHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEYE----NFNAASAKITIHGVNVHPGTAKGKM 232 (408)
T ss_pred CCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEec----cCceeEEEEEEeeecCCCCCCcccc
Confidence 789999999999998888888764432 3466665543 234544332 24778999999999999875 8999
Q ss_pred CCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhh
Q 013395 250 IDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH 329 (444)
Q Consensus 250 ~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~ 329 (444)
.|||..+++++..|++...+........+++++.++|| |++|++.+|+|+.+..+.+++.++|++++++.+..+
T Consensus 233 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~ 306 (408)
T PRK05469 233 VNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKY 306 (408)
T ss_pred cCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999988765322211112235778778776 899999999999999999999999999999988777
Q ss_pred -CCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCC
Q 013395 330 -RCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSL 407 (444)
Q Consensus 330 -~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~ 407 (444)
++++++++........+....++++++.+++++++. |.++.. ...+|++|+++|... +|++.+ |++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~~--~~~~ggtD~~~~~~~giP~v~~--gpG~------ 375 (408)
T PRK05469 307 GEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPII--KPIRGGTDGSQLSFMGLPCPNI--FTGG------ 375 (408)
T ss_pred CCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcEE--ecCCCcccHHHHhhCCCceEEE--CcCc------
Confidence 567777654211111234667899999999999985 866532 467899999999864 887654 5432
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 408 YPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 408 ~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
..+|++||+++++++..++++|.+++..++.+
T Consensus 376 ~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 376 HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 34999999999999999999999999988764
No 44
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1e-43 Score=361.00 Aligned_cols=355 Identities=15% Similarity=0.108 Sum_probs=257.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcch----------HHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCcc
Q 013395 58 TVNWMKKMRRQIHENPELAYEE----------FETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDAL 127 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e----------~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~v 127 (444)
..+.+++++++++++||.++++ .++++|+.++|+++|++++..+...+++++++++ +|+|+|+||+|||
T Consensus 9 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~DvV 87 (444)
T PRK07205 9 VQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDVV 87 (444)
T ss_pred hHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeeccC
Confidence 4577888999999999998754 5688999999999999987654445667777543 5899999999999
Q ss_pred CCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccc
Q 013395 128 PIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLE 199 (444)
Q Consensus 128 p~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~ 199 (444)
|+++.++|+++| ++||++||||+ |++++++|.|+++|++.+..++++|.|+|++|||+|+ |++.+++.....
T Consensus 88 p~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~ 167 (444)
T PRK07205 88 PEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQA 167 (444)
T ss_pred CCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCC
Confidence 998877899888 46899999995 9999999999999999998889999999999999985 888877642110
Q ss_pred ----ccce----e--------EEecccCCCCCceeeeccC--------c---------------ccccc----eeEEEEE
Q 013395 200 ----NVEA----I--------FGLHLVHKYPTGVVASRPG--------D---------------FLAGC----GSFKAKI 236 (444)
Q Consensus 200 ----~~d~----~--------~~~~~~~~~~~g~v~~~~g--------~---------------~~~G~----~~~~i~v 236 (444)
..|. + +++.. +++.......| . ...|. .+.++++
T Consensus 168 ~~~~~~~~~~~v~~~ekG~~~~~i~~---~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v 244 (444)
T PRK07205 168 TMGFAPDSSFPLTYAEKGLLQAKLVG---PGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTV 244 (444)
T ss_pred CeeECCCCCCceEEEEeceEEEEEEe---CCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEE
Confidence 0111 0 00110 11111000000 0 01121 2348999
Q ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHHhh-----cc--------------cCC-CCCCcEEEEEEeecCcccccccCc
Q 013395 237 SGKGGHAAIPQHCIDPILAVSSSVISLQNIV-----SR--------------EID-PLDSQVVSVAMINGGSSYNMIPDS 296 (444)
Q Consensus 237 ~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~-----~~--------------~~~-~~~~~t~~v~~i~gG~~~nviP~~ 296 (444)
+|+++|||.|+.|.|||..+++++..+++.. .+ ..+ .....|+|++. .|+||++
T Consensus 245 ~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~ 318 (444)
T PRK07205 245 LGKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEK 318 (444)
T ss_pred EeEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCE
Confidence 9999999999999999999999998886421 00 001 12346777765 3899999
Q ss_pred EEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCC
Q 013395 297 ATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPI 376 (444)
Q Consensus 297 a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~ 376 (444)
|++.+|+|+.|+.+.+++.+.|++++++ .+ +++.... ..+++ ..+.++++++.+.+++++.+|.+.. ...
T Consensus 319 a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~--v~~~~~~-~~~p~-~~~~~~~lv~~l~~~~~~~~g~~~~--~~~ 388 (444)
T PRK07205 319 SEIRIDIRIPVLADKEKLVQQLSQKAQE----YG--LTYEEFD-YLAPL-YVPLDSELVSTLMSVYQEKTGDDSP--AQS 388 (444)
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHH----cC--cEEEEec-CCCce-eeCCCcHHHHHHHHHHHHHhCCCCc--eEE
Confidence 9999999999999999999999998754 23 3333221 11222 2356788999999999998887532 233
Q ss_pred CCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 377 FTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 377 ~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
++|++|.. .++.++ .+|+.. ||+...+|++||+++++++.+++++|+.++.+++++
T Consensus 389 ~gg~~~~~----~~~~~i-~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 389 SGGATFAR----TMPNCV-AFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred eccHHHHH----hCCCcE-EECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 45555433 333222 467543 465678999999999999999999999999998753
No 45
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.7e-43 Score=352.81 Aligned_cols=346 Identities=16% Similarity=0.149 Sum_probs=268.0
Q ss_pred HHHHHHHHHHhcCC---------CCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEeccCccCC
Q 013395 60 NWMKKMRRQIHENP---------ELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADMDALPI 129 (444)
Q Consensus 60 ~~l~~l~~~~~~~p---------s~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~D~vp~ 129 (444)
++++++++.+++++ |.+++|.++++|++++|+++|++++.. ..+|+++++ +.+++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 34555566666664 466778999999999999999998864 567999999 4445689999999999996
Q ss_pred cCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC------CChhhhhhccccc----
Q 013395 130 QELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQEGVLE---- 199 (444)
Q Consensus 130 ~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~~~~~---- 199 (444)
+ |++||+ ++++++|.|++.|++.+..++++|.|++++|||.+ .|++.++.....+
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 455675 58999999999999999889999999999999984 2888887431100
Q ss_pred -------------------ccceeEEe-----------cccCC---CCCceeeeccCcccccceeEEEEEEecCCCCCC-
Q 013395 200 -------------------NVEAIFGL-----------HLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI- 245 (444)
Q Consensus 200 -------------------~~d~~~~~-----------~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~- 245 (444)
..|.++.. |.+.+ ++.+. .......++|..+++|+++|+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 01111211 11100 11110 001123446999999999999999985
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHH
Q 013395 246 PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIK 323 (444)
Q Consensus 246 p~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 323 (444)
|+ .+.|||..+++++.+|++...+.. .+.+++++.++|| .+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 309 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCR 309 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 64 578999999999999988643321 2369999999987 799999999999999999999999999999999999
Q ss_pred HHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCC
Q 013395 324 GQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDS 403 (444)
Q Consensus 324 ~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~ 403 (444)
..+..+++++++... ..++++..|+++++.+++++++ +|.++. ....+|++|+++|.+.+|.++. +|++.
T Consensus 310 ~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~~-- 379 (412)
T PRK12892 310 EIARRRGCRVSVDRI----AEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPSK-- 379 (412)
T ss_pred HHHHHhCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-EeccC--
Confidence 888788887777654 3466677788999999999999 687654 3567899999999887886543 45432
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 404 VGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 404 pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
...+|++||+++++++.+++++|+.++.+++.
T Consensus 380 ---~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 380 ---GGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 24589999999999999999999999988864
No 46
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=9e-44 Score=363.15 Aligned_cols=352 Identities=16% Similarity=0.169 Sum_probs=262.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcc------------hHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEecc
Q 013395 58 TVNWMKKMRRQIHENPELAYE------------EFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADM 124 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~------------e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~ 124 (444)
..++++++++++++|||.+++ +.++++|++++|+++|++++..+ |+++++ .+++.|+|+|+||+
T Consensus 12 ~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~~~l~l~gH~ 88 (466)
T PRK07318 12 RKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGEEVLGILGHL 88 (466)
T ss_pred hHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCCCEEEEEEec
Confidence 557788999999999998865 56899999999999999988543 566655 22335799999999
Q ss_pred CccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcc
Q 013395 125 DALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 125 D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (444)
||||+++ +|+++| ++||++||||+ |+++++++.|++.|++.+..++++|.|+|++|||.|+ |++++++..
T Consensus 89 DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~ 166 (466)
T PRK07318 89 DVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYFEHE 166 (466)
T ss_pred CCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHHHhC
Confidence 9999874 698888 46899999995 9999999999999999888889999999999999985 999988763
Q ss_pred cccc----cce---eEEecc-----------------------cCCCCCceee-------ec--------------cCcc
Q 013395 197 VLEN----VEA---IFGLHL-----------------------VHKYPTGVVA-------SR--------------PGDF 225 (444)
Q Consensus 197 ~~~~----~d~---~~~~~~-----------------------~~~~~~g~v~-------~~--------------~g~~ 225 (444)
.... .|. ++..+. .++.+.+.+. .. ....
T Consensus 167 ~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
T PRK07318 167 EAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENG 246 (466)
T ss_pred CCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcC
Confidence 2110 111 110000 0111111100 00 0012
Q ss_pred ccc-----ceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHh------h----c--------------ccCCCCCC
Q 013395 226 LAG-----CGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNI------V----S--------------REIDPLDS 276 (444)
Q Consensus 226 ~~G-----~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~------~----~--------------~~~~~~~~ 276 (444)
++| ..+++|+++|+++|+|.|+.|.|||..|++++..|+.. . . ......+.
T Consensus 247 ~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 326 (466)
T PRK07318 247 LKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGD 326 (466)
T ss_pred ceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccC
Confidence 234 34799999999999999999999999999999998641 0 0 00111235
Q ss_pred cEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCC--ccCCHHH
Q 013395 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP--TMNDVRI 354 (444)
Q Consensus 277 ~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~d~~l 354 (444)
.|+|++.++||... .|++.+|+|+.|+.+.+++.++|++.+++ .+ +++++. ..+++ .+.++++
T Consensus 327 ~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~~----~~~~p~~~~~d~~l 391 (466)
T PRK07318 327 LTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSEH----EHQKPHYVPKDDPL 391 (466)
T ss_pred eEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEEc----cCCCceeeCCCCHH
Confidence 69999999998432 79999999999999999999999998754 23 444432 12333 3567889
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013395 355 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAH 434 (444)
Q Consensus 355 ~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~ 434 (444)
++.+++++++.+|.++. ...++|++|++++...+ .+|+.. ||...++|++||+++++++.+++++|+.++.
T Consensus 392 v~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i-----~~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~~v~~~~l~ 462 (466)
T PRK07318 392 VKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGV-----AFGAMF--PGSEDTMHQANEYIEIDDLIKAAAIYAEAIY 462 (466)
T ss_pred HHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeE-----EeCCCC--CCCCCCCcCCCcceeHHHHHHHHHHHHHHHH
Confidence 99999999998787643 24578899998885432 245432 4555679999999999999999999999999
Q ss_pred HHhh
Q 013395 435 SYLV 438 (444)
Q Consensus 435 ~~~~ 438 (444)
++++
T Consensus 463 ~~~~ 466 (466)
T PRK07318 463 ELAK 466 (466)
T ss_pred HHhC
Confidence 8864
No 47
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=2.5e-43 Score=354.18 Aligned_cols=351 Identities=15% Similarity=0.137 Sum_probs=266.3
Q ss_pred HHHHHHHHHHhcCCCCCc----------chHHHHHHHHHHHHHcCCc-eeccCCCceEEEEe-CCCC--CcEEEEEeccC
Q 013395 60 NWMKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSGS--PPFVALRADMD 125 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~----------~e~~~~~~i~~~l~~~g~~-~~~~~~~~n~~~~~-~~~~--~~~ill~~H~D 125 (444)
+.+++.+-++++|+|.|+ .|+++++||+++|+++|++ ++.+++.+||+|++ ++.+ .|+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 455666777788888776 4558999999999999998 66654489999998 4333 39999999999
Q ss_pred ccCCcCCC-------------------------CCcccC-----------cCCCccccCcchHHHHHHHHHHHHHHhccc
Q 013395 126 ALPIQELV-------------------------EWEHKS-----------KIDGKMHACGHDAHVAMLLGAAKILQEMRE 169 (444)
Q Consensus 126 ~vp~~~~~-------------------------~w~~~p-----------~~~g~i~grG~k~~~a~~l~a~~~l~~~~~ 169 (444)
|||.+... .|.++| .+|+.+||.+||+++|++|.|+++|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99843211 566665 235689999999999999999999998644
Q ss_pred cCCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCC-CC
Q 013395 170 TLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QH 248 (444)
Q Consensus 170 ~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p-~~ 248 (444)
.++++|.|+|++|||.|+|++.+..++. +++..++++ ++|.|.+..+. .|..+++|+++|+++|++.+ ..
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~~----~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYET----FSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEcc----ccceEEEEEEEEEecCcccChHH
Confidence 4689999999999999888888765432 456666553 24666655442 37899999999999999975 57
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHh
Q 013395 249 CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAV 328 (444)
Q Consensus 249 g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~ 328 (444)
+.||+..+.+++..+..... + ..++-+.+.+++|. .|.+|++|++.+|+|+.+.++.+++.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988776654311 1 01111223455553 577999999999999999999999999999999998877
Q ss_pred hCC-ceeEEeccCCCCC-CCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCC
Q 013395 329 HRC-SAEVDFSGREHPT-LPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVG 405 (444)
Q Consensus 329 ~~~-~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg 405 (444)
++. .+++++... ..+ .+..+.++++++.+++++++. |.++. .....|++|+++|... +|++.+ |++.
T Consensus 308 ~g~~~v~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~~--G~G~---- 377 (410)
T TIGR01882 308 YGQDRIKLDMNDQ-YYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPNI--FAGG---- 377 (410)
T ss_pred cCCceEEEEEEee-ecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccceechHHHHHhCCCCCCeE--cCCc----
Confidence 763 455654321 122 124567889999999999885 76643 3467899999999875 887654 5532
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 406 SLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 406 ~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
.++|++|||++++++.+++++|++++..+.
T Consensus 378 --~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 378 --ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred --ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 459999999999999999999999998765
No 48
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-42 Score=349.80 Aligned_cols=347 Identities=16% Similarity=0.196 Sum_probs=269.7
Q ss_pred HHHHHHHHHHhcCCCC----------CcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC-CCcEEEEEeccCcc
Q 013395 60 NWMKKMRRQIHENPEL----------AYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDAL 127 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~----------s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~-~~~~ill~~H~D~v 127 (444)
+++++++++++++||. +++|.++++||+++|+++|++++.. ...|+++++ +++ ++|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 5677888888888853 4558999999999999999998864 466999999 544 35899999999999
Q ss_pred CCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC------Chhhhhhccccc--
Q 013395 128 PIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDMIQEGVLE-- 199 (444)
Q Consensus 128 p~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~~~~~~~~-- 199 (444)
|++ |.+|| |++++++|.|+++|++.+..++++|.|+|++|||.|+ |+..+......+
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 34455 6799999999999999888889999999999999862 776665432100
Q ss_pred -----------------------------ccceeEEecccCC---CCCceeeeccCcccccceeEEEEEEecCCCCCC-C
Q 013395 200 -----------------------------NVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-P 246 (444)
Q Consensus 200 -----------------------------~~d~~~~~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p 246 (444)
+.|..+.+|..++ ++.+. .......++|..+++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 1122222332111 00000 011123457999999999999999986 7
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 013395 247 Q-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG 324 (444)
Q Consensus 247 ~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 324 (444)
+ .|.|||..+++++.+|+++..+.. ...+++++.+++| ...|+||++|++.+|+|+.|+++.+++.++|+++++.
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 309 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAK 309 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 4 799999999999999998753321 2468999999985 7999999999999999999999999999999999998
Q ss_pred HHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCC
Q 013395 325 QAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSV 404 (444)
Q Consensus 325 ~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~p 404 (444)
.+..++.+++++.. ..++++..++++++.+++++++. |.++. ....+|++|+++|.+.+|..+. +|+..
T Consensus 310 ~~~~~~~~v~~~~~----~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~gp~~--- 378 (412)
T PRK12893 310 IAAARGVQVTVETV----WDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FVPCR--- 378 (412)
T ss_pred HHHHcCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-EeecC---
Confidence 87777777776543 34666777899999999998875 76643 3567899999999888885443 45432
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 405 GSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 405 g~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
...+|++||+++++++.+++++|+.++.+++++
T Consensus 379 --~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 379 --GGISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred --CCCCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 245899999999999999999999999998764
No 49
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-43 Score=331.92 Aligned_cols=359 Identities=21% Similarity=0.261 Sum_probs=278.4
Q ss_pred HHHHHHHHhcCCCCCcc--hH-HHHHHHHHHHHHcCCcee---ccCCCceEEEEe-CCC-CCcEEEEEeccCccCCcCCC
Q 013395 62 MKKMRRQIHENPELAYE--EF-ETSELIRRELDQLGIAYR---WPVAKTGVVATV-GSG-SPPFVALRADMDALPIQELV 133 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~--e~-~~~~~i~~~l~~~g~~~~---~~~~~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~ 133 (444)
.++.+++..+||+.-.+ -. .+++|+.++.+.+|..++ ...+.++++..| |++ ..+.|||++|+||||+...
T Consensus 27 ~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e- 105 (420)
T KOG2275|consen 27 SVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFRE- 105 (420)
T ss_pred HHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcc-
Confidence 33445566666654332 23 889999999999999875 234688899999 887 4599999999999999764
Q ss_pred CCcccC-----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhcccccccce
Q 013395 134 EWEHKS-----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGVLENVEA 203 (444)
Q Consensus 134 ~w~~~p-----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~~~~~d~ 203 (444)
.|+++| .++|.|||||+ |+..++.|+|++.|+..|.+++|+|.+.|++|||.|+ |++.+++...+++...
T Consensus 106 ~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~~ 185 (420)
T KOG2275|consen 106 KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLNL 185 (420)
T ss_pred cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccce
Confidence 899998 36788999996 8999999999999999999999999999999999884 9999988545556666
Q ss_pred eEEecccCC-CCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------cCCC
Q 013395 204 IFGLHLVHK-YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR---------EIDP 273 (444)
Q Consensus 204 ~~~~~~~~~-~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~---------~~~~ 273 (444)
.+.++ +++ .+... .+.+++++|..|++|++.|.+||||++.. ..|+..+.+++.++.+...+ ....
T Consensus 186 ~filD-EG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~ 261 (420)
T KOG2275|consen 186 GFILD-EGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLAL 261 (420)
T ss_pred eEEec-CCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceec
Confidence 66554 222 12222 34567778999999999999999998433 47888888888888765421 1122
Q ss_pred CCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHH-HHHHHHHHHhhCCceeEEeccC---CCCCCCCcc
Q 013395 274 LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERI-EEIIKGQAAVHRCSAEVDFSGR---EHPTLPPTM 349 (444)
Q Consensus 274 ~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i-~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~ 349 (444)
.+.+|+|++.++||.+.|++|+..++.+|+|+.+..|.+++++++ +++++ +++-.+++++... ..++..+..
T Consensus 262 ~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~----~~~eg~t~~f~~~~~~~~~~~t~~~ 337 (420)
T KOG2275|consen 262 GDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAE----EAGEGVTLEFSQKVILDYPPVTPTD 337 (420)
T ss_pred cceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhh----hcCCceEEeccCcccCCCCCCCCCC
Confidence 457899999999999999999999999999999999999999999 55544 4555566666432 223333334
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVI 428 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~ 428 (444)
.+.++|..+..++++..+.- . +...+|+||.++++.. +|. +.+.+..+. .-..|.-||++..+.+.+++++
T Consensus 338 ~s~p~w~~~~~a~~~~~~k~-~--~~i~~gstdsr~~rn~gvp~-~~fsp~~nt----~~~~H~hnE~l~~~~~l~gi~~ 409 (420)
T KOG2275|consen 338 DSNPFWTAFAGALKDEGGKG-Y--PEIGPGSTDSRHIRNEGVPA-IGFSPIINT----PMLLHDHNEFLNEKVFLRGIEI 409 (420)
T ss_pred CCChHHHHHHHHHHHhcCcc-c--eeecccccccchhhhcCcch-hcccccccc----cceecchhhhhCchhhhhhhhH
Confidence 56679999999999985442 2 4789999999999986 775 334454442 3779999999999999999999
Q ss_pred HHHHHHHHh
Q 013395 429 HAAFAHSYL 437 (444)
Q Consensus 429 ~~~~l~~~~ 437 (444)
|..++.++.
T Consensus 410 ~~~~i~~~~ 418 (420)
T KOG2275|consen 410 YYTIIVNLA 418 (420)
T ss_pred HHHHHHhhc
Confidence 999887654
No 50
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=3.6e-43 Score=344.68 Aligned_cols=329 Identities=14% Similarity=0.100 Sum_probs=252.5
Q ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccCcCCCc
Q 013395 65 MRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGK 144 (444)
Q Consensus 65 l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~ 144 (444)
+++++++|||++++|.++++||+++|+++|+++. .+...|+++..++ ++|+|+|+||+||||. .|+. ..+||+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~-~~~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~-~~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLI-IDDAGNFILGKGD-GHKKILLAGHVDTVPG----YIPV-KIEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEE-ECCCCcEEEEeCC-CCceEEEEccccccCC----Cccc-EEeCCE
Confidence 5788999999999999999999999999999985 3345788887743 3689999999999984 3432 257899
Q ss_pred cccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCCCCceeee
Q 013395 145 MHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVAS 220 (444)
Q Consensus 145 i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~ 220 (444)
+||||+ |+++++++.|++.|++. ..+|.|++++|||.|+ |++.+++... .+++++.+ |+. .+.+
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~e--pt~-~~~i-- 142 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGE--PSG-AEGI-- 142 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEec--CCC-Ccce--
Confidence 999995 99999999999999864 3589999999999985 9999888742 24555543 322 1112
Q ss_pred ccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEE
Q 013395 221 RPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (444)
Q Consensus 221 ~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~ 300 (444)
....+|..+++++++|+++|||.|. ||+..+.+++..|.+..... ......+++++.++||.+.|+||++|++.
T Consensus 143 --~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~~ 216 (336)
T TIGR01902 143 --TLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLELH 216 (336)
T ss_pred --eeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEEE
Confidence 1234699999999999999999875 58999999999887322111 11223578899999999999999999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcC
Q 013395 301 GTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGS 380 (444)
Q Consensus 301 ~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~ 380 (444)
+|+|+.|+++.+++.+++++. . .+++++.. ..+++ ..+.++++++.++++++++ +.++. ....+|+
T Consensus 217 idiR~~p~~~~~~~~~~i~~~-------~--~~~~~~~~-~~~p~-~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~~g~ 282 (336)
T TIGR01902 217 FDLRYPPNNKPEEAIKEITDK-------F--PICLEIVD-ETPPY-KVSRNNPLVRAFVRAIRKQ-GMKPR--LKKKTGT 282 (336)
T ss_pred EEEeeCCCCCHHHHHHHHHhc-------c--CceEEEEe-ccCce-ecCCCCHHHHHHHHHHHHc-CCCeE--Eeecccc
Confidence 999999999999988887761 2 23343321 11232 2356778999999999987 44432 2345788
Q ss_pred cHHHHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 381 EDFAFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 381 tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
+|++++.+. +|++ .+||+ ....+|++||+++++++.+++++|+.++.+++++
T Consensus 283 tD~~~~~~~~g~p~v--~~Gpg-----~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~~ 336 (336)
T TIGR01902 283 SDMNILAPIWTVPMV--AYGPG-----DSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQK 336 (336)
T ss_pred CccceeccccCCCeE--EECCC-----CcccCCCCcceeEHHHHHHHHHHHHHHHHHHhcC
Confidence 999999774 5544 46764 3356899999999999999999999999988753
No 51
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.5e-42 Score=349.28 Aligned_cols=347 Identities=15% Similarity=0.173 Sum_probs=266.4
Q ss_pred HHHHHHHHHHhcC----------CCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCC-C-CCcEEEEEeccCcc
Q 013395 60 NWMKKMRRQIHEN----------PELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS-G-SPPFVALRADMDAL 127 (444)
Q Consensus 60 ~~l~~l~~~~~~~----------ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~-~-~~~~ill~~H~D~v 127 (444)
+.+++++++++++ ||.+++|.++++||+++|+++|++++.. ..+|+++++++ + ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 4445555555555 4788899999999999999999998864 46799999943 3 35899999999999
Q ss_pred CCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC------CChhhhhhcccc---
Q 013395 128 PIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQEGVL--- 198 (444)
Q Consensus 128 p~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~~~~--- 198 (444)
|++ |.+ ++|+++++++.|+++|++.+..++++|.|+|++|||.| .|++.+++....
T Consensus 86 p~~------------g~~---d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNG------------GRF---DGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCC------------CCc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 974 222 23789999999999999988888999999999999984 277766532100
Q ss_pred -------------------cccceeEEecccCC----------------CCCceeeeccCcccccceeEEEEEEecCCCC
Q 013395 199 -------------------ENVEAIFGLHLVHK----------------YPTGVVASRPGDFLAGCGSFKAKISGKGGHA 243 (444)
Q Consensus 199 -------------------~~~d~~~~~~~~~~----------------~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hs 243 (444)
.+.|++++..-+|+ +|++. .......++|..+++|+++|+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHa 229 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGL-PIGVVTGIVGQRRYRVTFTGEANHA 229 (413)
T ss_pred HhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCC-cEEEEeeeeccEEEEEEEEEECCCC
Confidence 12344332100111 11111 0011234569999999999999999
Q ss_pred C-CC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHH
Q 013395 244 A-IP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEE 320 (444)
Q Consensus 244 s-~p-~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~ 320 (444)
+ .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|+.|+++.+++.++|++
T Consensus 230 s~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~ 306 (413)
T PRK09290 230 GTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRA 306 (413)
T ss_pred CCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 8 58 5789999999999999987643221 2358999999975 799999999999999999999999999999999
Q ss_pred HHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccC
Q 013395 321 IIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGML 400 (444)
Q Consensus 321 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~ 400 (444)
+++..+..++++++++.. ..+|++..++++++.+++++++. |.++. ....+|++|+++|...+|++++ +|+.
T Consensus 307 ~~~~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~-~gp~ 378 (413)
T PRK09290 307 AAEAIAARRGVEVEIELI----SRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMI-FVPS 378 (413)
T ss_pred HHHHHHHHcCCeEEEEEE----ecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEE-Eecc
Confidence 999887777777777653 34566777899999999999775 76543 3567899999999777887554 3432
Q ss_pred CCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 401 NDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 401 ~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
. ...+|++||+++++++.+++++|+.++.+++++
T Consensus 379 ~-----~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 379 V-----GGISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred C-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 2 245899999999999999999999999998864
No 52
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-42 Score=357.25 Aligned_cols=359 Identities=14% Similarity=0.150 Sum_probs=267.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCc-----ch----HHHHHHHHHHHHHcCCceeccCCCceE-E-EEeCCCCCcEEEEEeccC
Q 013395 57 DTVNWMKKMRRQIHENPELAY-----EE----FETSELIRRELDQLGIAYRWPVAKTGV-V-ATVGSGSPPFVALRADMD 125 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~-----~e----~~~~~~i~~~l~~~g~~~~~~~~~~n~-~-~~~~~~~~~~ill~~H~D 125 (444)
...++++++++++++|||.++ +| .+.++|+.++|+++|++++.. .|+ + +.+++...|+|+|+||+|
T Consensus 43 ~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~---~~~v~~~~~~g~~~~~l~l~gH~D 119 (520)
T PRK06156 43 KYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV---DNRVLEIGLGGSGSDKVGILTHAD 119 (520)
T ss_pred hhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec---CCeEEEEEecCCCCCeEEEEEecC
Confidence 467889999999999999874 23 356799999999999998642 354 4 666533458999999999
Q ss_pred ccCCcCCCCCcc-----cC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhh
Q 013395 126 ALPIQELVEWEH-----KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDM 192 (444)
Q Consensus 126 ~vp~~~~~~w~~-----~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~ 192 (444)
|||++. .+|.+ +| ++||++||||+ |+++++++.|+++|++.+.+++++|.|+|++|||.|+ |++.+
T Consensus 120 vVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 198 (520)
T PRK06156 120 VVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYY 198 (520)
T ss_pred ccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHH
Confidence 999865 47998 77 45899999995 9999999999999999888888999999999999985 99998
Q ss_pred hhcccccccceeEEec-------ccCCC--------------------------CCcee------eeccC----------
Q 013395 193 IQEGVLENVEAIFGLH-------LVHKY--------------------------PTGVV------ASRPG---------- 223 (444)
Q Consensus 193 ~~~~~~~~~d~~~~~~-------~~~~~--------------------------~~g~v------~~~~g---------- 223 (444)
++.+.. .+..++++ .+++. ..+.+ .....
T Consensus 199 ~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~ 276 (520)
T PRK06156 199 LERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQ 276 (520)
T ss_pred HHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHH
Confidence 876432 23332211 11110 00000 00000
Q ss_pred -------cccccce---------eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc------------------
Q 013395 224 -------DFLAGCG---------SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR------------------ 269 (444)
Q Consensus 224 -------~~~~G~~---------~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~------------------ 269 (444)
..++|.. +++|+++|+++|+|.|+.|.|||..+++++..|++....
T Consensus 277 ~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~ 356 (520)
T PRK06156 277 AAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDY 356 (520)
T ss_pred HHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCC
Confidence 0011333 899999999999999999999999999999998752100
Q ss_pred --------cCC-CCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccC
Q 013395 270 --------EID-PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGR 340 (444)
Q Consensus 270 --------~~~-~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~ 340 (444)
..+ ..+..+++++.+++|. ++|++.+|+|++|+.+.+++.++|++.++..+..++.++++....
T Consensus 357 ~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~- 429 (520)
T PRK06156 357 LGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYW- 429 (520)
T ss_pred ccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecC-
Confidence 001 1234578888888775 589999999999999999999999999987666666666554211
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 013395 341 EHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEH 420 (444)
Q Consensus 341 ~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~ 420 (444)
.++ .....++++++.+.+++++.+|.++. +...+|+||++++. . .+.+||.. +|....+|++||+++++
T Consensus 430 -~~p-~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~----~-~v~fGP~~--~g~~~~aHt~dE~V~ie 498 (520)
T PRK06156 430 -GEP-MVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFP----N-AVSFGPAM--PGVKYTGHTENEFKTVE 498 (520)
T ss_pred -CCc-eeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCC----c-cEEEcCCC--CCCCCCCcCcccCCCHH
Confidence 121 12345778999999999999898653 35678999987763 2 33578753 24445689999999999
Q ss_pred chHHHHHHHHHHHHHHhhh
Q 013395 421 VLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 421 ~~~~~~~~~~~~l~~~~~~ 439 (444)
++.+++++|+.++.+++.-
T Consensus 499 ~l~~~~~i~~~~l~~l~~~ 517 (520)
T PRK06156 499 QFMLDLQMYTEMLIRIGNL 517 (520)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999863
No 53
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-41 Score=342.11 Aligned_cols=336 Identities=17% Similarity=0.148 Sum_probs=262.3
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcc
Q 013395 73 PELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH 150 (444)
Q Consensus 73 ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~ 150 (444)
++.+++|.++++||+++|+++|++++.. ..+|+++++ +.+ .+|+|+|+||+||||.+. . .++
T Consensus 33 ~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg------------~---~D~ 96 (414)
T PRK12891 33 LALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQPTGG------------R---YDG 96 (414)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCCCCc------------c---ccc
Confidence 3556778999999999999999999865 467999999 544 358999999999999642 1 257
Q ss_pred hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC------Chhhh------------------------hhccccc-
Q 013395 151 DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDM------------------------IQEGVLE- 199 (444)
Q Consensus 151 k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~------------------------~~~~~~~- 199 (444)
|++++++|.|+++|++.+..++++|.|++++|||.|+ |+..+ .+.++..
T Consensus 97 k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 176 (414)
T PRK12891 97 IYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGA 176 (414)
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcc
Confidence 9999999999999999999999999999999999852 66433 2333211
Q ss_pred ------ccceeEEecccCC---CCCceeeeccCcccccceeEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhc
Q 013395 200 ------NVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQ-HCIDPILAVSSSVISLQNIVS 268 (444)
Q Consensus 200 ------~~d~~~~~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~-~g~nai~~~~~~l~~l~~~~~ 268 (444)
..++.+.+|.+.+ ++.+. ........+|..+++|+++|+++|+| .|+ .|.|||..+++++..|+++..
T Consensus 177 ~~~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~ 255 (414)
T PRK12891 177 EPVGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGR 255 (414)
T ss_pred cccccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHH
Confidence 1223444444332 11110 00111334699999999999999998 576 589999999999999988743
Q ss_pred ccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCC
Q 013395 269 REIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP 347 (444)
Q Consensus 269 ~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 347 (444)
+. ....++|++.|+|| ...|+||++|++.+|+|+.|.++.+++.++|+++++..+..++++++++.. ..+++
T Consensus 256 ~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~ 328 (414)
T PRK12891 256 RD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQI----FGYAP 328 (414)
T ss_pred hc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEE----ecCCC
Confidence 21 12469999999997 689999999999999999999999999999999999888778877777653 34566
Q ss_pred ccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013395 348 TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAV 427 (444)
Q Consensus 348 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~ 427 (444)
+..|+++++.+++++++ .|.++.. ...+|++|++++...+|+++. +|++. ...+|++||+++++++..+++
T Consensus 329 ~~~d~~lv~~l~~a~~~-~G~~~~~--~~~~ggtDa~~~~~giPt~~~-~gp~~-----~~~aH~~dE~v~i~~l~~~~~ 399 (414)
T PRK12891 329 APFAPGCIDAVRDAARA-LGLSHMD--IVSGAGHDACFAARGAPTGMI-FVPCV-----DGLSHNEAEAITPEWFAAGAD 399 (414)
T ss_pred cCCCHHHHHHHHHHHHH-cCCCcee--cCCcchHHHHHHHhhCCEEEE-EEcCC-----CCCCCCccccCCHHHHHHHHH
Confidence 77788999999999876 4766532 468899998887777997553 44432 246899999999999999999
Q ss_pred HHHHHHHHHhhhcC
Q 013395 428 IHAAFAHSYLVNSG 441 (444)
Q Consensus 428 ~~~~~l~~~~~~~~ 441 (444)
+|+.++.++.++.+
T Consensus 400 il~~~l~~~~~~~~ 413 (414)
T PRK12891 400 VLLRAVLQSAQEAG 413 (414)
T ss_pred HHHHHHHHHhhhcC
Confidence 99999999987754
No 54
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=335.72 Aligned_cols=335 Identities=16% Similarity=0.157 Sum_probs=257.1
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeC-CC-CCcEEEEEeccCccCCcCCCCCcccCcCCCcccc
Q 013395 70 HENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-SG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHA 147 (444)
Q Consensus 70 ~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~-~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~g 147 (444)
..+||.+++|.++++||+++|+++|++++.. ...|++++++ .+ ++|+|+|+||+||||++ |.
T Consensus 28 ~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~--- 91 (414)
T PRK12890 28 WTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GR--- 91 (414)
T ss_pred eeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CC---
Confidence 3455788999999999999999999999865 4679999994 32 46899999999999964 22
Q ss_pred CcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC------Chhhhhhcccc----------------------c
Q 013395 148 CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDMIQEGVL----------------------E 199 (444)
Q Consensus 148 rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~~~~~~~----------------------~ 199 (444)
.++|++++++|.+++.|++.+..++++|.|++++|||.|+ |++.+...... -
T Consensus 92 ~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (414)
T PRK12890 92 YDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGG 171 (414)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCC
Confidence 2458899999999999999888889999999999999742 65544332110 0
Q ss_pred ccceeEE-------------ecccCC---CCCceeeeccCcccccceeEEEEEEecCCCCCC-CCC-CCCHHHHHHHHHH
Q 013395 200 NVEAIFG-------------LHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQH-CIDPILAVSSSVI 261 (444)
Q Consensus 200 ~~d~~~~-------------~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~~-g~nai~~~~~~l~ 261 (444)
..|.+.+ +|.+.+ .+.+. .......++|..+++|+++|+++|+|. |+. +.|||..+++++.
T Consensus 172 ~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~ 250 (414)
T PRK12890 172 DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVT 250 (414)
T ss_pred ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHH
Confidence 1222221 111100 00000 001123456999999999999999985 854 5899999999999
Q ss_pred HHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccC
Q 013395 262 SLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGR 340 (444)
Q Consensus 262 ~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~ 340 (444)
+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|+.|+++.+++.++|++++++.+..++.+++++..
T Consensus 251 ~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~-- 325 (414)
T PRK12890 251 AMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELERL-- 325 (414)
T ss_pred HHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe--
Confidence 9998753321 3568899999975 899999999999999999999999999999999999887777777777653
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 013395 341 EHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEH 420 (444)
Q Consensus 341 ~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~ 420 (444)
..++++..++++++.+.+++++. |.++. ...++|++|+++|.+..|.++. +|+.. ...+|++||+++++
T Consensus 326 --~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~gp~~-----~~~aHs~dE~v~i~ 394 (414)
T PRK12890 326 --SRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FVPCR-----GGISHNPEEAMDPE 394 (414)
T ss_pred --ecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-EecCC-----CCCCCCcCccCCHH
Confidence 34566777899999999999885 77643 2467899999999887665443 45432 24699999999999
Q ss_pred chHHHHHHHHHHHHHHh
Q 013395 421 VLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 421 ~~~~~~~~~~~~l~~~~ 437 (444)
++..++++|+.++.++.
T Consensus 395 ~l~~~~~i~~~ll~~l~ 411 (414)
T PRK12890 395 DLAAGARVLLDAVLRLD 411 (414)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998874
No 55
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=9.3e-41 Score=341.71 Aligned_cols=346 Identities=18% Similarity=0.220 Sum_probs=255.7
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC---CCcEEEEEeccCccCCcCC---
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG---SPPFVALRADMDALPIQEL--- 132 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~---~~~~ill~~H~D~vp~~~~--- 132 (444)
+++++++++++++|+++++|.++++|++++|+++|++++.+ ...|+++.+ +.. ..|+|+|.||+||||++..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQD-EVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEe-CCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 56788899999999999999999999999999999998765 467999998 321 3489999999999998643
Q ss_pred CCCcccC----cCCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhccccccc
Q 013395 133 VEWEHKS----KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENV 201 (444)
Q Consensus 133 ~~w~~~p----~~~g~i~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~ 201 (444)
.+|.++| ++||++||||+ |++++++|++++. .+ .++++|.++|++|||.| .|++.+..... ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 3688776 57899999994 6888888887664 33 35679999999999988 49998875432 23
Q ss_pred ceeEEecccCCCCCce-eeecc------------CcccccceeEEEEEEe-cCCCCCC-CCCCC-CHHHHHHHHHHHHHH
Q 013395 202 EAIFGLHLVHKYPTGV-VASRP------------GDFLAGCGSFKAKISG-KGGHAAI-PQHCI-DPILAVSSSVISLQN 265 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~-v~~~~------------g~~~~G~~~~~i~v~G-~~~Hss~-p~~g~-nai~~~~~~l~~l~~ 265 (444)
+.+++.+. ..+... ++... ...++|..+++|+++| +++|||. |+.+. ||+..+++++..+++
T Consensus 157 ~~~~~~d~--~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~ 234 (477)
T TIGR01893 157 KILINIDS--EEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKE 234 (477)
T ss_pred cEEEEecC--CCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhh
Confidence 44444321 111000 11100 0114689999999999 9999985 88885 999999999999887
Q ss_pred hhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHH------------------
Q 013395 266 IVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAA------------------ 327 (444)
Q Consensus 266 ~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~------------------ 327 (444)
.. ..+++.+.||.+.|+||++|++.+|+|.......+.+.+.+.+.+++.+.
T Consensus 235 ~~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (477)
T TIGR01893 235 NL----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVK 304 (477)
T ss_pred cC----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccc
Confidence 52 25788889999999999999999888865555555555444444433221
Q ss_pred --------------------------------------------------------------------------hhCCce
Q 013395 328 --------------------------------------------------------------------------VHRCSA 333 (444)
Q Consensus 328 --------------------------------------------------------------------------~~~~~~ 333 (444)
.++ +
T Consensus 305 ~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~--~ 382 (477)
T TIGR01893 305 VFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAG--A 382 (477)
T ss_pred ccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcC--e
Confidence 122 3
Q ss_pred eEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCC
Q 013395 334 EVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGS-FLLLGMLNDSVGSLYPLHS 412 (444)
Q Consensus 334 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~~H~ 412 (444)
+++... ..+++ .++.|+++++.+.+++++++|.++.. ...+|++|+++|.+.+|++ .+.+|+.. .++|+
T Consensus 383 ~v~~~~-~~~p~-~~~~d~plv~~l~~a~~~~~g~~~~~--~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~------~~~H~ 452 (477)
T TIGR01893 383 RVEVSA-GYPSW-QPDPQSNLLDTARKVYSEMFGEDPEV--KVIHAGLECGIISSKIPDIDMISIGPNI------YDPHS 452 (477)
T ss_pred EEEEec-CCCcc-cCCCCCHHHHHHHHHHHHHHCCCCeE--EEeecCccHHHHHhhCCCceEEEeCCCC------CCCCC
Confidence 333321 11222 23467889999999999999987643 5788999999988866653 45577743 45999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHH
Q 013395 413 PYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 413 ~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
+||+|+++++.+++++++.++..+
T Consensus 453 ~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 453 PNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCceeeHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998654
No 56
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=2.8e-40 Score=335.74 Aligned_cols=344 Identities=17% Similarity=0.199 Sum_probs=262.8
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CC-C--CCcEEEEEeccCccCCcCC--
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GS-G--SPPFVALRADMDALPIQEL-- 132 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~-~--~~~~ill~~H~D~vp~~~~-- 132 (444)
.+.++++++++++||++|++|.++++|+.++++++|++++.+ ...|+++++ +. + ..|+|+|.||+||||++..
T Consensus 9 ~~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~ 87 (485)
T PRK15026 9 PQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDT 87 (485)
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCc
Confidence 366788899999999999999999999999999999998754 467999887 32 2 3589999999999998642
Q ss_pred -CCCcccCc----CCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccccc
Q 013395 133 -VEWEHKSK----IDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLEN 200 (444)
Q Consensus 133 -~~w~~~p~----~~g~i~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~ 200 (444)
.+|.++|. +||++||||+ |++++++|.++ ++.+. .+++|.++|++|||.|+ |++.+... . .+
T Consensus 88 ~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~~-~-~~ 161 (485)
T PRK15026 88 VHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQSN-W-LQ 161 (485)
T ss_pred cccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhhc-c-CC
Confidence 36988774 7899999995 67888877665 44454 37899999999999995 99988543 2 35
Q ss_pred cceeEEecccCCCCCc--eeeeccCc------------ccccceeEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHH
Q 013395 201 VEAIFGLHLVHKYPTG--VVASRPGD------------FLAGCGSFKAKISG-KGGHAA-IPQHCI-DPILAVSSSVISL 263 (444)
Q Consensus 201 ~d~~~~~~~~~~~~~g--~v~~~~g~------------~~~G~~~~~i~v~G-~~~Hss-~p~~g~-nai~~~~~~l~~l 263 (444)
.++++.+++. ..| .++++.|. ..+|..+++|+++| +++||+ .++.|. |||..+++++..+
T Consensus 162 ~~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~ 238 (485)
T PRK15026 162 ADILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGH 238 (485)
T ss_pred cCEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHh
Confidence 7888887543 223 22332111 11477899999999 999999 599999 9999999999985
Q ss_pred HHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHH------------------
Q 013395 264 QNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQ------------------ 325 (444)
Q Consensus 264 ~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~------------------ 325 (444)
.. ..+++++.++||.+.|+||++|++.+++|.......+.+.+.+.+.+...
T Consensus 239 ~~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (485)
T PRK15026 239 AE----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVAND 308 (485)
T ss_pred Hh----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEcccc
Confidence 42 25889999999999999999999999999876666666655555444321
Q ss_pred --------------------------------------------------------------------------HHhhCC
Q 013395 326 --------------------------------------------------------------------------AAVHRC 331 (444)
Q Consensus 326 --------------------------------------------------------------------------a~~~~~ 331 (444)
+..+|
T Consensus 309 ~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g- 387 (485)
T PRK15026 309 KAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAG- 387 (485)
T ss_pred ccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcC-
Confidence 01111
Q ss_pred ceeEEeccCCCCCCCCcc--CCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCC-cEEEeccCCCCCCCCC
Q 013395 332 SAEVDFSGREHPTLPPTM--NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPG-SFLLLGMLNDSVGSLY 408 (444)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~~~pg~~~ 408 (444)
.+++. ...+|+|. .|+++++.+.+++++++|.++. +...+|++|++.|.+..|+ .++.+||.. .
T Consensus 388 -~~~~~----~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~------~ 454 (485)
T PRK15026 388 -AKTEA----KGAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTI------T 454 (485)
T ss_pred -cEEEE----eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCC------C
Confidence 11111 13456664 4678999999999999998754 3678999999999987776 345678875 3
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 409 PLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 409 ~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
.+|+|||+++++++....+++..++.++
T Consensus 455 ~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 455 GPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 4999999999999988777777777766
No 57
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=2.3e-40 Score=334.62 Aligned_cols=345 Identities=16% Similarity=0.145 Sum_probs=247.6
Q ss_pred HHHHHHHHHHhcCCCCCcc------------hHHHHHHHHHHHHHcCCceeccCCCceEEEE--eCCCCCcEEEEEeccC
Q 013395 60 NWMKKMRRQIHENPELAYE------------EFETSELIRRELDQLGIAYRWPVAKTGVVAT--VGSGSPPFVALRADMD 125 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~------------e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~--~~~~~~~~ill~~H~D 125 (444)
++++++++++++|||.+.+ +.++++|++++|+++|++++... |+.+. +++ ..|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~---~~~~~~~~~~-~~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVD---NYAGYAEYGQ-GEEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEec---CceEEEEeCC-CCCeEEEEeecC
Confidence 4678889999999998732 36899999999999999987432 44333 332 357999999999
Q ss_pred ccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccc
Q 013395 126 ALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 197 (444)
Q Consensus 126 ~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 197 (444)
|||+++ +|+++| ++||+|||||+ |+++++++.|++.|++.+..++++|.|+|++|||.|+ |+..+++...
T Consensus 78 ~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 78 VVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 999875 698887 46899999995 9999999999999999888889999999999999985 8888876532
Q ss_pred cc----ccce---eEEecc----------------------cCCCCCcee--------eec------------------c
Q 013395 198 LE----NVEA---IFGLHL----------------------VHKYPTGVV--------ASR------------------P 222 (444)
Q Consensus 198 ~~----~~d~---~~~~~~----------------------~~~~~~g~v--------~~~------------------~ 222 (444)
.. ..|. ++..+. ..+++++.+ ..+ .
T Consensus 156 ~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
T TIGR01887 156 APDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELE 235 (447)
T ss_pred CCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcc
Confidence 11 1121 111110 012232221 100 0
Q ss_pred CcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH--Hhhcc---------------------cCC-CCCCcE
Q 013395 223 GDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQ--NIVSR---------------------EID-PLDSQV 278 (444)
Q Consensus 223 g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~--~~~~~---------------------~~~-~~~~~t 278 (444)
|...++..+++|+++|+++|||.|+.|.|||..+++++..++ +...+ ..+ ..+.++
T Consensus 236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t 315 (447)
T TIGR01887 236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLT 315 (447)
T ss_pred eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcE
Confidence 111122227999999999999999999999999999999986 21000 001 124568
Q ss_pred EEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHH
Q 013395 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHV 358 (444)
Q Consensus 279 ~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 358 (444)
+|++.|++| .|++|++.+|+|++|+.+.+++.+++.+.+. +. ..+.... ..+++. .+.++++++.+
T Consensus 316 ~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~-~~~p~~-~~~~~~lv~~l 381 (447)
T TIGR01887 316 MNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENG-YLKPLY-VPKDDPLVQTL 381 (447)
T ss_pred EEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEcc-CCCCeE-ECCCCHHHHHH
Confidence 999999988 3899999999999999999987777664322 11 2222211 112221 24577899999
Q ss_pred HHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013395 359 RRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 433 (444)
Q Consensus 359 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l 433 (444)
.+++++.+|.++. +...+|+||++.+ |.. +.+||.. ||+..++|++||+++++++..++++|+.++
T Consensus 382 ~~~~~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 382 MKVYEKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 9999999887653 2456777876653 433 3467653 577788999999999999999999998763
No 58
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.7e-39 Score=325.87 Aligned_cols=330 Identities=16% Similarity=0.183 Sum_probs=254.8
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCC-CcEEEEEeccCccCCcCCCCCcccCcCCCccccCcc
Q 013395 73 PELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGS-PPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH 150 (444)
Q Consensus 73 ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~-~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~ 150 (444)
.+.+++|.++++|++++|+++|++++.+ ..+||++++ ++++ +|+|+|.||+||||.+ |+.+|+
T Consensus 24 ~~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~-- 88 (401)
T TIGR01879 24 LALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ-- 88 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH--
Confidence 3567889999999999999999998854 468999999 4443 5899999999999963 555664
Q ss_pred hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-----C-CChhhhhhccccc--------------------ccce-
Q 013395 151 DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----G-TGAKDMIQEGVLE--------------------NVEA- 203 (444)
Q Consensus 151 k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g-~G~~~~~~~~~~~--------------------~~d~- 203 (444)
.+++++|.+++.|++.+..++++|.|++++|||. | .|++.++.....+ ..+.
T Consensus 89 -~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 167 (401)
T TIGR01879 89 -LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLP 167 (401)
T ss_pred -HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCcc
Confidence 5899999999999999999999999999999997 3 3887776422100 0111
Q ss_pred ------------eEEecccCC---CCCceeeeccCcccccceeEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHh
Q 013395 204 ------------IFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQ-HCIDPILAVSSSVISLQNI 266 (444)
Q Consensus 204 ------------~~~~~~~~~---~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~-p~-~g~nai~~~~~~l~~l~~~ 266 (444)
.+-+|.+.+ +..|.. ......++|..+++|+++|+++|++. |+ .++||+..+++++..|+++
T Consensus 168 ~~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l 246 (401)
T TIGR01879 168 NQPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEK 246 (401)
T ss_pred cccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 111121111 001100 01123456999999999999999986 53 5789999999999999987
Q ss_pred hcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCC
Q 013395 267 VSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTL 345 (444)
Q Consensus 267 ~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~ 345 (444)
..+.. ...+.+++.+++| .+.|+||++|++.+|+|+.|+++.+++.++|+++++..+..++.+++++.. ..+
T Consensus 247 ~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~----~~~ 319 (401)
T TIGR01879 247 AKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERW----MDE 319 (401)
T ss_pred HHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEe----ecC
Confidence 53321 2347889999985 779999999999999999999999999999999999887777777777654 345
Q ss_pred CCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013395 346 PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 425 (444)
Q Consensus 346 ~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~ 425 (444)
+++..|+++++.+.++++++ |.++. ...+++++|+++|.+..|..+ .+||+. ...+|++||+++++++.++
T Consensus 320 ~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg~-----~~~aH~~dE~v~~e~l~~~ 390 (401)
T TIGR01879 320 EPVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPSI-----NGISHNPAEWSNITDCAEG 390 (401)
T ss_pred CCcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEecCC-----CCCcCCCCccCCHHHHHHH
Confidence 66778999999999999875 76543 246789999999988755433 466543 3568999999999999999
Q ss_pred HHHHHHHHHH
Q 013395 426 AVIHAAFAHS 435 (444)
Q Consensus 426 ~~~~~~~l~~ 435 (444)
+++|+.++.+
T Consensus 391 ~~vl~~~i~~ 400 (401)
T TIGR01879 391 AKVLYLMVYQ 400 (401)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 59
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=4.1e-39 Score=325.03 Aligned_cols=356 Identities=18% Similarity=0.182 Sum_probs=253.0
Q ss_pred HHHHHHHHHhcCCCCCcc------hHHHHHHHHHHHHHcCCceeccC--CCceEEEEeCCCCCcEEEEEeccCccCCcCC
Q 013395 61 WMKKMRRQIHENPELAYE------EFETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQEL 132 (444)
Q Consensus 61 ~l~~l~~~~~~~ps~s~~------e~~~~~~i~~~l~~~g~~~~~~~--~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~ 132 (444)
++++++++++++||.+.. +.++++|++++|+++|++++..+ +.+|+++.++++ .++|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 356778899999997643 57899999999999999986432 457999998543 47899999999999865
Q ss_pred CCCcccC----cCCCccccCc---chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccc--ccccc
Q 013395 133 VEWEHKS----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV--LENVE 202 (444)
Q Consensus 133 ~~w~~~p----~~~g~i~grG---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~--~~~~d 202 (444)
+.|.++| ++||++|||| ||++++++|.|+++|++. .++++|.|+|++|||.|+ ++..+++... ....|
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 3688877 4689999999 499999999999999874 367899999999999985 4556554321 12467
Q ss_pred eeEEecccCCCCCceeeeccCcc-----------cccc---eeEEEEEEecC-CCCCCCCCCCC--HHHHHHHHHHHHHH
Q 013395 203 AIFGLHLVHKYPTGVVASRPGDF-----------LAGC---GSFKAKISGKG-GHAAIPQHCID--PILAVSSSVISLQN 265 (444)
Q Consensus 203 ~~~~~~~~~~~~~g~v~~~~g~~-----------~~G~---~~~~i~v~G~~-~Hss~p~~g~n--ai~~~~~~l~~l~~ 265 (444)
++++.++.... ..+..+.|.. ..|. .++.+++.|.+ +|++.+..+.| ++..+++++.++..
T Consensus 158 ~~iv~Ept~~~--~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINADGIGMK--PIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeCCCCCc--chhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 87776432221 1222222110 0122 34555566664 99998766665 58888877776654
Q ss_pred hhccc-----CC--CCCCcEEEEEEeecCc-----------------------------------ccccc---cCcEEEE
Q 013395 266 IVSRE-----ID--PLDSQVVSVAMINGGS-----------------------------------SYNMI---PDSATVA 300 (444)
Q Consensus 266 ~~~~~-----~~--~~~~~t~~v~~i~gG~-----------------------------------~~nvi---P~~a~~~ 300 (444)
..... .. .....++++....+|. ..|++ |++|++.
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 31100 00 0112233333323343 55666 9999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcC
Q 013395 301 GTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGS 380 (444)
Q Consensus 301 ~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~ 380 (444)
+|+|+.+ .+.+++.++|+++++.. ..+.+++++... ..+.+.++.++++++.+++++++ .|.++. +...+|+
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~-~g~~~~--~~~~~Gg 387 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKE-LGEDAE--PVEGPGA 387 (438)
T ss_pred EEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHH-hCCCcE--EEecCCc
Confidence 9999988 68899999999988643 244555655431 23444556788899999999998 487643 4678999
Q ss_pred cHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 381 EDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 381 tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
||++++... +|++. +|+.. .++|++|||+.++++.+++++|..++.++++
T Consensus 388 tDa~~~~~~Gip~v~--~Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~~ 438 (438)
T PRK08554 388 SDSRYFTPYGVKAID--FGPKG------GNIHGPNEYVEIDSLKKMPEVYKRIALRLLG 438 (438)
T ss_pred hHHHHHHhcCCCceE--ECCCC------CCCCCCcceEEHHHHHHHHHHHHHHHHHHhC
Confidence 999999765 99765 57643 4699999999999999999999999988864
No 60
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=4e-38 Score=315.30 Aligned_cols=328 Identities=15% Similarity=0.172 Sum_probs=257.1
Q ss_pred CCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchH
Q 013395 75 LAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDA 152 (444)
Q Consensus 75 ~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~ 152 (444)
.|.++.++++|+++||+++|++++.+ ..+|+++++ |.+ +.|+|++.+|+||||.+ |+.-| +.
T Consensus 28 ~s~~~~~a~~~~~~~~~~~Gl~v~~D-~~gN~~~~~~g~~~~~~~i~~gsHlDtv~~g------------G~~dg---~~ 91 (406)
T TIGR03176 28 YSPEWLAAQQQFKKRMAESGLETRFD-DVGNLYGRLVGTEFPEETILTGSHIDTVVNG------------GNLDG---QF 91 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCeEEEeccccCCCCC------------CccCc---hh
Confidence 34557899999999999999998755 578999999 555 45899999999999954 33222 57
Q ss_pred HHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-----C-Chhhhhhc------------------------cc-----
Q 013395 153 HVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQE------------------------GV----- 197 (444)
Q Consensus 153 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~~------------------------~~----- 197 (444)
|+++.|++++.|++++..++++|.++++.+||.+ . |++.+.-. |+
T Consensus 92 Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~ 171 (406)
T TIGR03176 92 GALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKA 171 (406)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcccc
Confidence 8999999999999999999999999999999975 1 66655520 00
Q ss_pred ---ccccceeEEecccCC-------CCCceeeeccCcccccceeEEEEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHH
Q 013395 198 ---LENVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQH--CIDPILAVSSSVISLQN 265 (444)
Q Consensus 198 ---~~~~d~~~~~~~~~~-------~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~--g~nai~~~~~~l~~l~~ 265 (444)
..++++.+-+|.+.+ .+.|.+ ...+|..+++|+++|+++|+|.++. +.||+..+++++..+.+
T Consensus 172 ~~~~~~~~~~~elHieqG~~Le~~g~~igiv-----~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~ 246 (406)
T TIGR03176 172 PTVRDDIKAFVELHIEQGCVLESEGQSIGVV-----NAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIE 246 (406)
T ss_pred cccccccceEEEEEECCCcchHHCCCeEEEE-----eecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 012344555665433 122222 2335999999999999999997554 38999999999999988
Q ss_pred hhcccCCCCCCcEEEEEEee-cCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCC
Q 013395 266 IVSREIDPLDSQVVSVAMIN-GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPT 344 (444)
Q Consensus 266 ~~~~~~~~~~~~t~~v~~i~-gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~ 344 (444)
...+. ....+++++.|+ +|...|+||++|++.+|+|..+..+.+.+.+++++.+++.+..++++++++... ..
T Consensus 247 ~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~---~~ 320 (406)
T TIGR03176 247 RAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLWM---DE 320 (406)
T ss_pred HHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEe---cC
Confidence 64321 234589999999 578999999999999999999999999999999999999988888888776431 22
Q ss_pred CCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 345 LPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 345 ~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
++...|+++++.+.+++++..+ ++. ...++|++|+++|.+.+|+++. +|+..+ +..|+|||+++++++..
T Consensus 321 -~p~~~d~~lv~~l~~a~~~~~~-~~~--~~~sggg~Da~~~~~~vP~~~i-fgp~~~-----g~~H~p~E~v~~e~l~~ 390 (406)
T TIGR03176 321 -APVPMNKEIVAIIEQLAKAEKL-NYR--LMHSGAGHDAQIFAPRVPTAMI-FVPSIG-----GISHNPAERTNIEDLVE 390 (406)
T ss_pred -CCCCCCHHHHHHHHHHHHHcCC-Cce--ecCcccHHHHHHHHHHCCEEEE-EEeCCC-----CCCCCccccCCHHHHHH
Confidence 3345678999999999998744 322 3567899999999998997664 444321 35899999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 013395 425 GAVIHAAFAHSYLVN 439 (444)
Q Consensus 425 ~~~~~~~~l~~~~~~ 439 (444)
++++|+.++.+++..
T Consensus 391 g~~vl~~~l~~l~~~ 405 (406)
T TIGR03176 391 GVKTLADMLYELAYK 405 (406)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998764
No 61
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-39 Score=299.60 Aligned_cols=364 Identities=20% Similarity=0.216 Sum_probs=280.1
Q ss_pred hHHHHHHHHHHHhcCCCCCcch------HHHHHHHHHHHHHcCCceeccC-------------CCceEEEEeCCC-CCcE
Q 013395 58 TVNWMKKMRRQIHENPELAYEE------FETSELIRRELDQLGIAYRWPV-------------AKTGVVATVGSG-SPPF 117 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e------~~~~~~i~~~l~~~g~~~~~~~-------------~~~n~~~~~~~~-~~~~ 117 (444)
..+++++.+++.++|+|.+.+. .++++|++++|+++|-+.+..+ ..+-+++++|++ ++++
T Consensus 14 ~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~Gsdp~Kkt 93 (473)
T KOG2276|consen 14 NKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVLGSDPSKKT 93 (473)
T ss_pred cHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcccCCCCcce
Confidence 5688888899999999987664 7899999999999997765211 245688888887 5689
Q ss_pred EEEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Ch
Q 013395 118 VALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GA 189 (444)
Q Consensus 118 ill~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~ 189 (444)
+++||||||+|++..++|.++| ++||++||||+ ||+++++++|++++++.|..++.||+|+|.+.||+|+ |.
T Consensus 94 vlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~EgmEEsgS~~L 173 (473)
T KOG2276|consen 94 VLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEGMEESGSEGL 173 (473)
T ss_pred EEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEechhccCccH
Confidence 9999999999999888999999 67899999997 8999999999999999999999999999999999996 77
Q ss_pred hhhhhc---ccccccceeEEec---ccCCCCCceeeeccCcccccceeEEEEEEe--cCCCCCC-CCCCCCHHHHHHHHH
Q 013395 190 KDMIQE---GVLENVEAIFGLH---LVHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAI-PQHCIDPILAVSSSV 260 (444)
Q Consensus 190 ~~~~~~---~~~~~~d~~~~~~---~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G--~~~Hss~-p~~g~nai~~~~~~l 260 (444)
..++++ .+++++|++.+-. .+-..|..+++.| |.+.+.|+|.| +..||+. ...-+-|+..+..++
T Consensus 174 ~~l~~~~kD~~~~~vD~vciSdnyWlg~kkPcltyGlR------G~~yf~i~v~g~~~DlHSGvfGG~~hE~m~dL~~~m 247 (473)
T KOG2276|consen 174 DELIEKEKDKFFKDVDFVCISDNYWLGTKKPCLTYGLR------GVIYFQIEVEGPSKDLHSGVFGGVVHEAMNDLVLVM 247 (473)
T ss_pred HHHHHHHhhhhhccCCEEEeeCceeccCCCcccccccc------cceeEEEEEeecccccccccccchhHHHHHHHHHHH
Confidence 776643 3455778765432 2222455555555 99999999999 8899995 434457777777777
Q ss_pred HHHHHhhccc-------------------------------------CCC-----------CCCcEEEEEEeecC----c
Q 013395 261 ISLQNIVSRE-------------------------------------IDP-----------LDSQVVSVAMINGG----S 288 (444)
Q Consensus 261 ~~l~~~~~~~-------------------------------------~~~-----------~~~~t~~v~~i~gG----~ 288 (444)
..|.+...+. ..+ =.++++++.+|.|. .
T Consensus 248 s~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeGaFs~pG 327 (473)
T KOG2276|consen 248 SSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEGAFSGPG 327 (473)
T ss_pred HHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecccceeeCCC
Confidence 7775432210 000 12458888888753 6
Q ss_pred ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCce--eEEeccCCCCCCCCc--cCCHHHHHHHHHHHHH
Q 013395 289 SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSA--EVDFSGREHPTLPPT--MNDVRIYQHVRRVTAE 364 (444)
Q Consensus 289 ~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~ 364 (444)
..++||..+.-+|.+|+.|.++++.+.+.+.+++++.-.+.+..- ++++. ....+| ..+++-+..+++++++
T Consensus 328 ~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~----~~~~~Wv~d~~~~~y~a~krA~~~ 403 (473)
T KOG2276|consen 328 AKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMG----HAGAPWVSDPDDPHYLALKRAIET 403 (473)
T ss_pred ceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeec----CCCCceecCCCchhHHHHHHHHHH
Confidence 789999999999999999999999999999999988766555543 44432 233333 3456688899999999
Q ss_pred HhCCcccccCCCCCcCcHHHHHH-HHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 365 ILGEENVKLAPIFTGSEDFAFFL-DEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 365 ~~g~~~~~~~~~~~g~tD~~~~~-~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
++|.+|. ....+|+.+..... +.+...+..++.+..+ +++|+.||++++.++.++++++++++.++.
T Consensus 404 v~gvePd--~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d----D~aHsqNEkl~i~N~~~G~k~l~ay~~el~ 471 (473)
T KOG2276|consen 404 VYGVEPD--FTREGGSIPVTLTFQDITGKSVLLLPYGASD----DGAHSQNEKLNITNYVEGTKVLAAYISELA 471 (473)
T ss_pred hhCCCCC--ccccCCccceehHHHHHhCCCeEEecccccc----cchhhhcccccHHHHhhhHHHHHHHHHHHh
Confidence 9998864 46788888875444 4433333344544322 679999999999999999999999998875
No 62
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2.8e-37 Score=321.33 Aligned_cols=349 Identities=16% Similarity=0.176 Sum_probs=274.4
Q ss_pred chhhHHHHHHHHHHHhcCCCC-------------CcchHHHHHHHHHHHHHcCCc-eeccCCCceEEEEe-CCC-CCcEE
Q 013395 55 DQDTVNWMKKMRRQIHENPEL-------------AYEEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSG-SPPFV 118 (444)
Q Consensus 55 ~~~~~~~l~~l~~~~~~~ps~-------------s~~e~~~~~~i~~~l~~~g~~-~~~~~~~~n~~~~~-~~~-~~~~i 118 (444)
.....+++++.+..+.+|+.+ |..+.++++|+.+||+++|++ ++.+ ..+||++++ |.+ +.|+|
T Consensus 176 ~~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D-~~gNv~~~~~g~~~~~p~v 254 (591)
T PRK13799 176 TPAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEID-AVGNVVGRYKAADDDAKTL 254 (591)
T ss_pred ChhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeEC-CCCCEEEEcCCCCCCCCeE
Confidence 346778889999999998631 223578999999999999998 8754 568999999 544 46999
Q ss_pred EEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-----C-CChhhh
Q 013395 119 ALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----G-TGAKDM 192 (444)
Q Consensus 119 ll~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g-~G~~~~ 192 (444)
++.+|+||||. ||+.+|+ .|+++.|++++.|++.+.+++++|.|+...+||. + .|++.+
T Consensus 255 ~~gSHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~ 319 (591)
T PRK13799 255 ITGSHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGAL 319 (591)
T ss_pred EEeccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHH
Confidence 99999999984 4888887 6999999999999999999999999999999997 2 266655
Q ss_pred h--------h----ccc-----c-----------------cccceeEEecccCC-------CCCceeeeccCccccccee
Q 013395 193 I--------Q----EGV-----L-----------------ENVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGS 231 (444)
Q Consensus 193 ~--------~----~~~-----~-----------------~~~d~~~~~~~~~~-------~~~g~v~~~~g~~~~G~~~ 231 (444)
. + +|. + .++++.+-+|.+.+ .+.|.+ +..+|..+
T Consensus 320 ~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV-----~g~~G~~~ 394 (591)
T PRK13799 320 IGDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV-----TSIAGSAR 394 (591)
T ss_pred hCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE-----eeeccceE
Confidence 4 1 111 0 02233444444443 223333 23469999
Q ss_pred EEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCCh
Q 013395 232 FKAKISGKGGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNK 308 (444)
Q Consensus 232 ~~i~v~G~~~Hss~-p~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~ 308 (444)
++|+++|+++|+|. |. .+.||+..+++++..+++...+ .+....+++++.++++ .+.|+||++|++.+|+|..+.
T Consensus 395 ~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~--~~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~ 472 (591)
T PRK13799 395 YICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQ--DQHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATD 472 (591)
T ss_pred EEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHh--cCCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCH
Confidence 99999999999996 53 5789999999999999987543 2223357889888853 489999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH
Q 013395 309 KRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD 388 (444)
Q Consensus 309 ~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~ 388 (444)
.+.+.+.+++++.+++.+..+++.+++++. ...+++..|+++++.+.++.++ +|.++. ...+++++|+++|.+
T Consensus 473 e~~e~l~~~i~~~i~~ia~~~g~~~ei~~~----~~~~~~~~d~~lv~~~~~a~~~-~G~~~~--~~~sgag~Da~~~a~ 545 (591)
T PRK13799 473 EIRDAAVADILAEIAAIAARRGIEYKAELA----MKAAAAPCAPELMKQLEAATDA-AGVPLF--ELASGAGHDAMKIAE 545 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCcchHHHHHHHHh
Confidence 999999999999999988888888777754 3456677889999999998876 477643 246789999999999
Q ss_pred HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 389 EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 389 ~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
..|..+++.++++ .+..|++||+++++++..++++|+.++.++..
T Consensus 546 ~~p~amif~~~g~-----~g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 546 IMDQAMLFTRCGN-----AGISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred hCCEEEEEEecCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 8876665455432 13589999999999999999999999988764
No 63
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=3.1e-37 Score=321.30 Aligned_cols=348 Identities=14% Similarity=0.139 Sum_probs=271.9
Q ss_pred hhhHHHHHHHHHHHhcCCCC-------------CcchHHHHHHHHHHHHHcCC-ceeccCCCceEEEEe-CCCC-CcEEE
Q 013395 56 QDTVNWMKKMRRQIHENPEL-------------AYEEFETSELIRRELDQLGI-AYRWPVAKTGVVATV-GSGS-PPFVA 119 (444)
Q Consensus 56 ~~~~~~l~~l~~~~~~~ps~-------------s~~e~~~~~~i~~~l~~~g~-~~~~~~~~~n~~~~~-~~~~-~~~il 119 (444)
....+++++.+..+.+|+.+ |..+.++++|+++||+++|+ +++.+ ..+|+++++ |.++ .|+|+
T Consensus 177 ~~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~ 255 (591)
T PRK13590 177 PVLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLL 255 (591)
T ss_pred chHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEE
Confidence 35778888888888888652 23457999999999999999 77644 578999999 5443 48999
Q ss_pred EEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC------CChhhh-
Q 013395 120 LRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDM- 192 (444)
Q Consensus 120 l~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~- 192 (444)
+.+|+||||.+ |+.+| ++|++++|++++.|++.+..++++|.|+++++||.+ .|++.+
T Consensus 256 ~gsHlDTV~~g------------G~~DG---~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13590 256 TGSHYDTVRNG------------GKYDG---RLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALI 320 (591)
T ss_pred EecccccCCCC------------CCccc---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHh
Confidence 99999999853 66666 489999999999999999988999999999999973 155532
Q ss_pred -------hhc---------------cc-----------ccccceeEEecccCC-------CCCceeeeccCcccccceeE
Q 013395 193 -------IQE---------------GV-----------LENVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGSF 232 (444)
Q Consensus 193 -------~~~---------------~~-----------~~~~d~~~~~~~~~~-------~~~g~v~~~~g~~~~G~~~~ 232 (444)
++. ++ .+++.+.+-+|.+++ .+.+.+. ..+|..++
T Consensus 321 G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~-----~~~G~~~~ 395 (591)
T PRK13590 321 GDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVT-----SINGSVRY 395 (591)
T ss_pred CCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEEe-----eeeccEEE
Confidence 110 10 012334444555544 1233333 23599999
Q ss_pred EEEEEecCCCCCC-CCC-CCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeec-CcccccccCcEEEEEEEeCCChh
Q 013395 233 KAKISGKGGHAAI-PQH-CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING-GSSYNMIPDSATVAGTFRAFNKK 309 (444)
Q Consensus 233 ~i~v~G~~~Hss~-p~~-g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~g-G~~~nviP~~a~~~~diR~~~~~ 309 (444)
+|+++|+++|+|. |.. +.||+..+++++..+++.... ....+.+++.+++ |.+.|+||++|++.+|+|..+..
T Consensus 396 ~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e 471 (591)
T PRK13590 396 VGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDA 471 (591)
T ss_pred EEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHH
Confidence 9999999999996 544 689999999999999886322 1234678998873 56899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH
Q 013395 310 RFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE 389 (444)
Q Consensus 310 ~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ 389 (444)
+.+.+.+++++.+++.+..++++++++.. ...++.+.|+++++.+.+++++. |.++. ....+|++|++++...
T Consensus 472 ~~e~v~~~i~~~i~~ia~~~g~~vei~~~----~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~ 544 (591)
T PRK13590 472 QRDAMVADVLAELEAICERRGLRYTLEET----MRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEI 544 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEEEEe----ecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHH
Confidence 99999999999999998888888888754 34566788899999999999874 77643 2568899999999988
Q ss_pred cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 390 IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 390 ~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
+|..+. +|++..+ +.+|++||+++++++..++++|+.++..++.++
T Consensus 545 ~p~~mi-fgpg~~~----g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~~ 590 (591)
T PRK13590 545 MPQAML-FVRGENA----GISHNPLESSTADDMQLAVQAFQHLLDQLAAEQ 590 (591)
T ss_pred CCEEEE-EEeeCCC----CCCCCCccCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 886543 5554211 458999999999999999999999999887653
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=5.8e-24 Score=208.00 Aligned_cols=351 Identities=16% Similarity=0.166 Sum_probs=264.9
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCce-eccC-------CCc--e-EEEEeCCC--CCcEEEEEeccC
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAY-RWPV-------AKT--G-VVATVGSG--SPPFVALRADMD 125 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~-~~~~-------~~~--n-~~~~~~~~--~~~~ill~~H~D 125 (444)
.+.+++.+.++++||+.|..|.+++.++.+|++.+|+.+ .+.. ... | +.+.+.+. .-|++-|.+|+|
T Consensus 4 ~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~D 83 (414)
T COG2195 4 MERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHD 83 (414)
T ss_pred hHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeecccccccccccccccc
Confidence 467888899999999999999999999999999999998 3211 122 2 44555443 238899999999
Q ss_pred ccCCcC----CCCC---------------------cccCc------------CCCccccCcchHHHHHHHHHHHHHHhcc
Q 013395 126 ALPIQE----LVEW---------------------EHKSK------------IDGKMHACGHDAHVAMLLGAAKILQEMR 168 (444)
Q Consensus 126 ~vp~~~----~~~w---------------------~~~p~------------~~g~i~grG~k~~~a~~l~a~~~l~~~~ 168 (444)
|+|... ..+| .+.|. +|..+-|-+.|+|++.++.++..+++..
T Consensus 84 t~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~ 163 (414)
T COG2195 84 TVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKH 163 (414)
T ss_pred ccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcC
Confidence 996311 1133 12331 1112334444899999999999999763
Q ss_pred -ccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCC-
Q 013395 169 -ETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI- 245 (444)
Q Consensus 169 -~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~- 245 (444)
.-+.++|++.|+++||.| .|+..+..... .++..+.++ + .+.|.+.... .+...+++++.|+..|++.
T Consensus 164 ~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD--G-g~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a 234 (414)
T COG2195 164 PEIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD--G-GPVGEIPREA----FNAAAVRATIVGPNVHPGSA 234 (414)
T ss_pred ccccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC--C-CccCeeeeec----cchheeeeeeeccCcCccch
Confidence 347899999999999999 58877654411 456666653 2 3456555432 2566799999999999996
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHH
Q 013395 246 PQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQ 325 (444)
Q Consensus 246 p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 325 (444)
.....||+..+.++...+..... ...++.+.+..++++..|.|.+++.....+|.......+.....+++.+++.
T Consensus 235 ~~~~i~a~~~a~e~~~~~~~~~~-----~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~ 309 (414)
T COG2195 235 KGKMINALLLAAEFILELPLEEV-----PELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEM 309 (414)
T ss_pred HHHHhhHHHhhhhhhhcCCcccc-----cccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHH
Confidence 66678999988888777655321 1245667778888899999999999999999999988888889999999998
Q ss_pred HHhhC--CceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccC
Q 013395 326 AAVHR--CSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGML 400 (444)
Q Consensus 326 a~~~~--~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~ 400 (444)
++.++ ..++++.. ..||.+ ..++.+++.+++++++++.. +. .....|++|++.+..+ .|+..++.||
T Consensus 310 ~~~~g~~~~~~~~~~----~~Yp~~~~~~~~~iv~~a~~a~~~l~~~-p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp- 381 (414)
T COG2195 310 AASLGKLAGAELEVK----DSYPGWKIKPDSPLVDLAKKAYKELGIK-PK--VKPIHGGTDGGVLSFKGLPTPNISTGP- 381 (414)
T ss_pred HHHhhhccceEEEEe----ccccCcCCCCCchHHHHHHHHHHHhCCC-ce--EEEeecccchhhhhccCCCCceEeccc-
Confidence 88888 66777765 345555 35677999999999999555 43 3789999999998876 8888778886
Q ss_pred CCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 401 NDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 401 ~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
. .+.|+++|+|+++++.+..+++..++..+.
T Consensus 382 ~------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 382 G------ENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred c------cCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 3 569999999999999999999998887653
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.88 E-value=2e-22 Score=181.08 Aligned_cols=176 Identities=28% Similarity=0.369 Sum_probs=135.2
Q ss_pred EEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Ch
Q 013395 119 ALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GA 189 (444)
Q Consensus 119 ll~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~ 189 (444)
+|++|||||| + .++|.++| .++|++||||+ |+++++++.|++.|++.+..++++|.|+|+++||.|+ |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 67899887 57899999996 8999999999999999888999999999999999995 99
Q ss_pred hhhhhcccc--cccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 013395 190 KDMIQEGVL--ENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIV 267 (444)
Q Consensus 190 ~~~~~~~~~--~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~ 267 (444)
+.+++++.. .++|.++..++ +. . +.. .
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~e~--~~-------~------~~~-~----------------------------------- 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIGEP--TG-------K------GGV-G----------------------------------- 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEECEC--ET-------T------SEE-E-----------------------------------
T ss_pred hhhhhhcccccccccccccccc--cc-------c------ccc-c-----------------------------------
Confidence 999988422 23444443211 10 0 110 0
Q ss_pred cccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCC
Q 013395 268 SREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP 347 (444)
Q Consensus 268 ~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 347 (444)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH--HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013395 348 TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 425 (444)
Q Consensus 348 ~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~ 425 (444)
...++++++.+.+++++.++.+. .+...++++|++++.+ ..+..+..+|++. .++|++||++.++++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~------~~~H~~~E~i~~~~l~~~ 179 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGG------SNAHTPDEYIDIEDLVKG 179 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCE------ESTTSTT-EEEHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCC------CCCCCCCcEecHHHHHHH
Confidence 34677899999999999866232 2468999999999995 3232344567643 569999999999999999
Q ss_pred HHHHHHHHHH
Q 013395 426 AVIHAAFAHS 435 (444)
Q Consensus 426 ~~~~~~~l~~ 435 (444)
+++|+.++++
T Consensus 180 ~~~~~~~l~n 189 (189)
T PF01546_consen 180 AKIYAALLEN 189 (189)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.76 E-value=2.5e-17 Score=156.62 Aligned_cols=259 Identities=15% Similarity=0.154 Sum_probs=173.1
Q ss_pred HHHHHHHHHHhcCCCCCcc--hHHHHHHHHHHHHHcCCcee----------ccC--CCceEEEEe-CCCCCcEEEEEecc
Q 013395 60 NWMKKMRRQIHENPELAYE--EFETSELIRRELDQLGIAYR----------WPV--AKTGVVATV-GSGSPPFVALRADM 124 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~--e~~~~~~i~~~l~~~g~~~~----------~~~--~~~n~~~~~-~~~~~~~ill~~H~ 124 (444)
+++.++.-++++.||.++- |...+++|...|+++.+--+ ..+ ++.||+|-+ |+.++.+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 6677788889999997664 68899999999988754211 112 578999999 65577999999999
Q ss_pred CccCCcCCC---CCcccC----------------------cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEE
Q 013395 125 DALPIQELV---EWEHKS----------------------KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVV 176 (444)
Q Consensus 125 D~vp~~~~~---~w~~~p----------------------~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~ 176 (444)
|||.+.+-. +.-++| .-|+|++|||+ |+|+|+.|++++.+.++ ....+||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 999875522 222333 24789999994 99999999999999987 56899999
Q ss_pred EEEecCCCCC-CChhhhhhc--cccc--ccceeEEecccCCCC--CceeeeccCcccccceeEEEEEEecCCCCCCCCCC
Q 013395 177 LIFQPAEERG-TGAKDMIQE--GVLE--NVEAIFGLHLVHKYP--TGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHC 249 (444)
Q Consensus 177 ~~~~~~EE~g-~G~~~~~~~--~~~~--~~d~~~~~~~~~~~~--~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g 249 (444)
|+.++|||.. .|++..+.. ++.+ ++++..++..+...+ .|.-+--..+...|.+-.-.-+.|+..|.|+|..|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~G 246 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEG 246 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccC
Confidence 9999999987 487665532 1222 455555544333221 12111001122347777788899999999999999
Q ss_pred CCHHHHHHHHHHHHHHhh---cccCCCCC--CcEEEEEEeecCccccc-ccCcEEEEEEEeCCChhhHHHHHHHHHHHH
Q 013395 250 IDPILAVSSSVISLQNIV---SREIDPLD--SQVVSVAMINGGSSYNM-IPDSATVAGTFRAFNKKRFNALRERIEEII 322 (444)
Q Consensus 250 ~nai~~~~~~l~~l~~~~---~~~~~~~~--~~t~~v~~i~gG~~~nv-iP~~a~~~~diR~~~~~~~~~v~~~i~~~~ 322 (444)
+||-.+++++..+|+-.. ++...... ++.+--..+. .+.|| .|.++.+.+|+=+ -+.+.+++.+++++.+
T Consensus 247 vnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlK--e~Y~VqTp~~a~~~fN~l~-h~~ta~~~~d~l~~~a 322 (553)
T COG4187 247 VNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLK--ESYNVQTPERAWLYFNWLY-HSRTAKELFDRLKEEA 322 (553)
T ss_pred CCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhh--hhccccCcchhhhhheehh-hcCCHHHHHHHHHHHH
Confidence 999999999999997432 22111111 1111111111 23444 6889999999854 3444555555554443
No 67
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.69 E-value=1.6e-16 Score=129.93 Aligned_cols=103 Identities=23% Similarity=0.334 Sum_probs=93.6
Q ss_pred cccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CCCCCcEEEEEEeecCcccccccCcEEEE
Q 013395 226 LAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-----DPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (444)
Q Consensus 226 ~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~-----~~~~~~t~~v~~i~gG~~~nviP~~a~~~ 300 (444)
++|..+++|+++|+++|+|.|+.|+||+..+++++..|++...+.. ......+++++.++||...|+||++|++.
T Consensus 3 ~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~ 82 (111)
T PF07687_consen 3 HRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLT 82 (111)
T ss_dssp EEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEE
T ss_pred CCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEE
Confidence 3599999999999999999999999999999999999998854432 45667899999999999999999999999
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHHHHHh
Q 013395 301 GTFRAFNKKRFNALRERIEEIIKGQAAV 328 (444)
Q Consensus 301 ~diR~~~~~~~~~v~~~i~~~~~~~a~~ 328 (444)
+|+|+.|..+.+++.+.|++++++.+.+
T Consensus 83 ~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 83 VDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 9999999999999999999999987654
No 68
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.66 E-value=3e-15 Score=143.42 Aligned_cols=123 Identities=17% Similarity=0.276 Sum_probs=97.2
Q ss_pred HHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------------------CCceEEEEeCCCCCcEEEEEeccCccC
Q 013395 68 QIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------------------AKTGVVATVGSGSPPFVALRADMDALP 128 (444)
Q Consensus 68 ~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------------------~~~n~~~~~~~~~~~~ill~~H~D~vp 128 (444)
.+-..+..+..|.++++||+++|+++|++++.+. ...||++.+.+...+.|++.||+|||+
T Consensus 43 ~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~AH~DTV~ 122 (346)
T PRK10199 43 FFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYA 122 (346)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEEEcCcCC
Confidence 4666788889999999999999999999875211 135799999444458999999999996
Q ss_pred CcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 129 IQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 129 ~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
.....+|.+.. +-++++|+ |+|++++|+++++|++. .++++|.|+++++||.|. |++++++.
T Consensus 123 p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 123 PQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred CCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 43323343322 23788886 79999999999999865 467899999999999995 99999876
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.61 E-value=2.1e-13 Score=132.71 Aligned_cols=129 Identities=24% Similarity=0.344 Sum_probs=104.0
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEeccCccCC-----cC--
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADMDALPI-----QE-- 131 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~D~vp~-----~~-- 131 (444)
+.+.+++++++++|++++.|.+++++++++|+++|++++. ++.+|+++.+ +...+|+|+|.||+|+|+. .+
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~-D~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYEL-TRRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEE-CCCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 4577889999999999999999999999999999999875 4789999988 5334579999999999754 11
Q ss_pred ------CCCCc-------------------------c-----------------c-----------C-------------
Q 013395 132 ------LVEWE-------------------------H-----------------K-----------S------------- 139 (444)
Q Consensus 132 ------~~~w~-------------------------~-----------------~-----------p------------- 139 (444)
..+|+ . + +
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 00110 0 0 0
Q ss_pred ----------cCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCCh
Q 013395 140 ----------KIDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGA 189 (444)
Q Consensus 140 ----------~~~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~ 189 (444)
..+|++|||+. |+++++++.+++.|++.+.+++.+|.++|+++||.|.|+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ga 223 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGA 223 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccc
Confidence 13568889884 899999999999999887778999999999999999763
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.55 E-value=2.5e-13 Score=132.54 Aligned_cols=248 Identities=16% Similarity=0.130 Sum_probs=161.9
Q ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCC-----cCC------
Q 013395 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI-----QEL------ 132 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~-----~~~------ 132 (444)
+++++++++|++++.|.+++++++++|+++|.+++. ++.+|+++.+++.++|+|+|.||+|+|+. .+.
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 568999999999999999999999999999998875 57899999884344579999999999864 110
Q ss_pred --CCCccc----------------------------C-----------------------------------cCCCcccc
Q 013395 133 --VEWEHK----------------------------S-----------------------------------KIDGKMHA 147 (444)
Q Consensus 133 --~~w~~~----------------------------p-----------------------------------~~~g~i~g 147 (444)
.+|... + ..++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 022110 0 01223444
Q ss_pred Ccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeeeccCc
Q 013395 148 CGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGD 224 (444)
Q Consensus 148 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~ 224 (444)
+.- +.++++++++++.+++. +++.+|.++|+..||.| .|++..... . ++|.+++++.
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~-i--~pd~~I~vDv--------------- 222 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDT--------------- 222 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc-c--CCCEEEEEec---------------
Confidence 443 58999999999999754 57899999999999999 588766533 1 3344443311
Q ss_pred ccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEe
Q 013395 225 FLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFR 304 (444)
Q Consensus 225 ~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR 304 (444)
+. |.-.|.... .....+..|
T Consensus 223 ----------~~-----~~d~~~~~~----------------------------~~~~~lg~G----------------- 242 (344)
T PRK09961 223 ----------AC-----WAKNFDYGA----------------------------ANHRQIGNG----------------- 242 (344)
T ss_pred ----------cC-----CCCCCCCCC----------------------------CcccccCCC-----------------
Confidence 00 111111000 000011112
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHH
Q 013395 305 AFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFA 384 (444)
Q Consensus 305 ~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 384 (444)
..+.... . ....|+.+.+.+.+++++. +.+.... ...+++||++
T Consensus 243 ----------------------------p~i~~~D---~---~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~ggGTDa~ 286 (344)
T PRK09961 243 ----------------------------PMLVLSD---K---SLIAPPKLTAWIETVAAEI-GIPLQAD-MFSNGGTDGG 286 (344)
T ss_pred ----------------------------ceEEEcc---C---CcCCCHHHHHHHHHHHHHc-CCCcEEE-ecCCCcchHH
Confidence 1121110 1 1234677888888887776 6554321 2344679999
Q ss_pred HHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 385 FFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 385 ~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
.+.. .+|++.+.+|. ..+|+++|+++++++..+++++..++..+
T Consensus 287 ~~~~~~~Giptv~ig~p~--------ry~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 287 AVHLTGTGVPTVVMGPAT--------RHGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHhCCCCCEEEechhh--------hcccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 7765 37876653332 35999999999999999999999998543
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.41 E-value=4.9e-11 Score=114.79 Aligned_cols=142 Identities=23% Similarity=0.335 Sum_probs=105.2
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCC-CCCcEEEEEeccCccCC-----cCC-
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS-GSPPFVALRADMDALPI-----QEL- 132 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~-~~~~~ill~~H~D~vp~-----~~~- 132 (444)
+.+.+++++++.+|++|+.|.++.++++++|++++.+++. ++.+|+++++++ ++.|.|++.||||.+.. .+.
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~-D~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEV-DRLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEE-cCCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 4567889999999999999999999999999999999874 478999999955 44466999999999743 111
Q ss_pred -------CCCccc------------------------C------c-----------------------------------
Q 013395 133 -------VEWEHK------------------------S------K----------------------------------- 140 (444)
Q Consensus 133 -------~~w~~~------------------------p------~----------------------------------- 140 (444)
.+|... | .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 133211 0 0
Q ss_pred ---------CCCccccCc--chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEe
Q 013395 141 ---------IDGKMHACG--HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGL 207 (444)
Q Consensus 141 ---------~~g~i~grG--~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~ 207 (444)
.++++-+|. .+.++++++++++.| + +..++.++.|+|+..||.| +|++..... . +.|.++.+
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~-i--~pd~aiav 234 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR-I--KPDIAIAV 234 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc-c--CCCEEEEE
Confidence 001222222 269999999999999 4 7789999999999999999 688776544 2 44555544
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.27 E-value=7.8e-11 Score=114.73 Aligned_cols=316 Identities=13% Similarity=0.092 Sum_probs=168.6
Q ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CC-CCCcEEEEEeccCccCCcCCCCCcccC-c
Q 013395 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GS-GSPPFVALRADMDALPIQELVEWEHKS-K 140 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~-~~~~~ill~~H~D~vp~~~~~~w~~~p-~ 140 (444)
+++++++.+|++|+.|.+++++++++|++++.+++. +..+|+++.+ +. +.+|+|+|.||+|+|+.- -.. .
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~-D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~------V~~I~ 74 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVET-DGLGGIFGIKESQVENAPRVMVAAHMDEVGFM------VSQIK 74 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEecCCCCCCCEEEEEecccEeCEE------EEEEC
Confidence 358889999999999999999999999999988764 4688999988 43 345799999999999731 110 1
Q ss_pred CCCcccc--Cc-chHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--C-CCh--hhhhhccc-cc---cc-ceeEEe
Q 013395 141 IDGKMHA--CG-HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER--G-TGA--KDMIQEGV-LE---NV-EAIFGL 207 (444)
Q Consensus 141 ~~g~i~g--rG-~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~--g-~G~--~~~~~~~~-~~---~~-d~~~~~ 207 (444)
++|.|+= .| .+. . .+.+.-..+++.+.+. | -|. .++.+... .+ .. +..+-+
T Consensus 75 ~~G~l~~~~vGG~~~---------------~-~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDi 138 (350)
T TIGR03107 75 PDGTFRVVELGGWNP---------------L-VVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDG 138 (350)
T ss_pred CCceEEEEeCCCccc---------------c-ccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEe
Confidence 3354442 22 000 0 1222223333333321 2 122 23332100 01 11 121111
Q ss_pred cccCCCCCceeeeccCcccccceeEEEEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEE---E
Q 013395 208 HLVHKYPTGVVASRPGDFLAGCGSFKAKIS-GKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA---M 283 (444)
Q Consensus 208 ~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~-G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~---~ 283 (444)
.....+..-..+.+.|..- ...-..... +..-=.+......=....+.+++..+++.. ....-....++. +
T Consensus 139 Ga~skee~~~~GI~vGd~v--~~~~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~~---~~~~l~~~~tvqEEvG 213 (350)
T TIGR03107 139 GFTNKDEAWSFGVRPGDVI--VPQTETILTANGKNVISKAWDNRYGVLMILELLESLKDQE---LPNTLIAGANVQEEVG 213 (350)
T ss_pred CCCCHHHHHhcCCCCCCEE--EECCCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhcC---CCceEEEEEEChhhcC
Confidence 1111111111222332210 001011111 111011222222334555666666664321 110001111111 2
Q ss_pred eecC-cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHH
Q 013395 284 INGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVT 362 (444)
Q Consensus 284 i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 362 (444)
.+|. .+.+.++....+.+|+-......... . . +.|....+.... . ....++.+.+.+.+++
T Consensus 214 ~rGA~~aa~~i~pD~aI~vDv~~~~d~~~~~--~---~-------~lg~Gp~i~~~D----~--~~i~~~~l~~~l~~~A 275 (350)
T TIGR03107 214 LRGAHVSTTKFNPDIFFAVDCSPAGDIYGDQ--G---G-------KLGEGTLLRFFD----P--GHIMLPRMKDFLLTTA 275 (350)
T ss_pred chhhhhHHhhCCCCEEEEEecCCcCCCCCCC--c---c-------ccCCCceEEEec----C--CCCCCHHHHHHHHHHH
Confidence 2232 34555666788889987643221111 1 0 122233343321 1 2345788999999999
Q ss_pred HHHhCCcccccCCCCCcCcHHHHH--HH-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 363 AEILGEENVKLAPIFTGSEDFAFF--LD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 363 ~~~~g~~~~~~~~~~~g~tD~~~~--~~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
++. +.+... ...+|+||++.+ .. .+|++...+|. ..+|++.|.++++++...++++..++.++
T Consensus 276 ~~~-~I~~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~--------Ry~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 276 EEA-GIKYQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCA--------RYIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred HHc-CCCcEE--ecCCCCchHHHHHHhCCCCcEEEEccCc--------ccccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 886 887543 445679999844 33 38887776665 45999999999999999999999998764
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.07 E-value=2e-09 Score=104.77 Aligned_cols=320 Identities=13% Similarity=0.044 Sum_probs=168.4
Q ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccCcCCC
Q 013395 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDG 143 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g 143 (444)
+++++++..|++|+.|.+++++++++|+.++.++. .+..+|+++..+ .++++|+|.||+|.|+.- -..-.++|
T Consensus 4 ~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~-~D~~GNli~~~g-~~~~kvml~AHmDevG~m-----V~~I~~~G 76 (356)
T PRK09864 4 ELLQQLCEASAVSGDEQEVRDILINTLEPCVNEIT-FDGLGSFVARKG-NKGPKVAVVGHMDEVGFM-----VTHIDESG 76 (356)
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEE-ECCCCCEEEEeC-CCCcEEEEEecccccCEE-----EEEECCCC
Confidence 56889999999999999999999999999999876 457889999874 334799999999999731 00012346
Q ss_pred cccc--CcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--C-CCh--hhhhhccc-cc--ccc-eeEEecccCC
Q 013395 144 KMHA--CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER--G-TGA--KDMIQEGV-LE--NVE-AIFGLHLVHK 212 (444)
Q Consensus 144 ~i~g--rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~--g-~G~--~~~~~~~~-~~--~~d-~~~~~~~~~~ 212 (444)
.|+= .|- + ....-+..++.+. +.+.+. | -|. .++..... .+ ..+ ..+-+.....
T Consensus 77 ~l~~~~lGG-------------~-~~~~l~~q~V~i~-t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ 141 (356)
T PRK09864 77 FLRFTTIGG-------------W-WNQSMLNHRVTIR-THKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSR 141 (356)
T ss_pred eEEEEeCCC-------------c-CccccCCCEEEEE-eCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCH
Confidence 5542 221 0 0011122233333 332221 3 122 23332111 00 112 2221111111
Q ss_pred CCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEE---EeecC-c
Q 013395 213 YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA---MINGG-S 288 (444)
Q Consensus 213 ~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~---~i~gG-~ 288 (444)
+..-..+.++|... ...-..+..+..-=.|......=....+.+++..+++. +..-....++. +.+|. .
T Consensus 142 ee~~~~GV~vGD~v--~~~~~~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~~-----~~~vy~v~TvQEEvGlrGA~~ 214 (356)
T PRK09864 142 EEVEKRGVEIGDFI--SPEANFACWGEDKVVGKALDNRIGCAMMAELLQTVNNP-----EITLYGVGSVEEEVGLRGAQT 214 (356)
T ss_pred HHHHhcCCCCCCEE--EECCCcEEEcCCEEEEEeCccHHHHHHHHHHHHHhhcC-----CCeEEEEEEcchhcchHHHHH
Confidence 11111222332111 00111111111111222222233445555666555431 11111122221 22222 3
Q ss_pred ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCC
Q 013395 289 SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGE 368 (444)
Q Consensus 289 ~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~ 368 (444)
+.+.++....+.+|.-.........-... . .+.|...-+.... . ....++.+.+.+.+++++. +.
T Consensus 215 aa~~i~PDiaIavDvt~~~d~p~~~~~~~-~-------~~lG~Gp~i~~~D----~--~~i~~~~l~~~l~~~A~~~-~I 279 (356)
T PRK09864 215 SAEHIKPDVVIVLDTAVAGDVPGIDNIKY-P-------LKLGQGPGLMLFD----K--RYFPNQKLVAALKSCAAHN-DL 279 (356)
T ss_pred HHhcCCCCEEEEEecccCCCCCCCccccc-c-------cccCCCCeEEEcc----C--CccCCHHHHHHHHHHHHHc-CC
Confidence 45567777788888775322211000000 0 0112122233321 1 2235788999999999887 88
Q ss_pred cccccCCCCCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 369 ENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 369 ~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
+.... ....|+||++.+.. .+|++...++. ...|+|.|-++++++...++++..++.++
T Consensus 280 p~Q~~-~~~~ggTDa~~i~~~~~Gvpt~~isiP~--------RY~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 280 PLQFS-TMKTGATDGGRYNVMGGGRPVVALCLPT--------RYLHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred CceEE-EcCCCCchHHHHHHhCCCCcEEEEeecc--------CcCCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 76542 23447999988854 28887776665 45999999999999999999999998764
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.41 E-value=2.6e-06 Score=89.39 Aligned_cols=90 Identities=26% Similarity=0.435 Sum_probs=69.8
Q ss_pred CceEEEEeCC-C-C-CcEEEEEeccCccCCcCCCCCcccCcCCCccccCcc-hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013395 103 KTGVVATVGS-G-S-PPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH-DAHVAMLLGAAKILQEMRETLKGTVVLI 178 (444)
Q Consensus 103 ~~n~~~~~~~-~-~-~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~-k~~~a~~l~a~~~l~~~~~~~~~~i~~~ 178 (444)
-.||+.+++. . . +-.|++++|+|+||.+. |-|. ..+++++|++++.+.+....+.++|+|+
T Consensus 128 i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFL 192 (834)
T KOG2194|consen 128 ISNIVVKISPKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFL 192 (834)
T ss_pred eeeEEEecCCCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEE
Confidence 4589999933 2 2 34899999999999542 4443 4689999999999998887889999999
Q ss_pred EecCCCCC-CChhhhhhc-ccccccceeEEe
Q 013395 179 FQPAEERG-TGAKDMIQE-GVLENVEAIFGL 207 (444)
Q Consensus 179 ~~~~EE~g-~G~~~~~~~-~~~~~~d~~~~~ 207 (444)
|...||.+ .|+..++.+ .+.+.+.+++.+
T Consensus 193 fNgaEE~~L~gsH~FItQH~w~~~~ka~INL 223 (834)
T KOG2194|consen 193 FNGAEESGLLGSHAFITQHPWSKNIKAVINL 223 (834)
T ss_pred ecCcccchhhhcccceecChhhhhhheEEec
Confidence 99999999 598888874 344455666654
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.30 E-value=1.7e-06 Score=76.85 Aligned_cols=81 Identities=27% Similarity=0.535 Sum_probs=60.0
Q ss_pred EEEEEeccCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhh
Q 013395 117 FVALRADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDM 192 (444)
Q Consensus 117 ~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~ 192 (444)
.|++.||+|+++ +.. + + -++.|+ -+|++++|++++.|++.+.+++++|+|+|..+||.|. |++.+
T Consensus 2 ~ivi~aH~Ds~~-~~~---~------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDA---D------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcC---C------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 689999999998 211 1 1 356675 4899999999999999888889999999999999995 99999
Q ss_pred hhcc--cccccceeEEec
Q 013395 193 IQEG--VLENVEAIFGLH 208 (444)
Q Consensus 193 ~~~~--~~~~~d~~~~~~ 208 (444)
++.. ..+++.+++.++
T Consensus 71 ~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHHHCHHHHEEEEEEEC
T ss_pred HHhhhcccccceeEEecc
Confidence 9631 223456666553
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=97.45 E-value=0.00053 Score=65.58 Aligned_cols=59 Identities=25% Similarity=0.322 Sum_probs=45.0
Q ss_pred ccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEe
Q 013395 144 KMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGL 207 (444)
Q Consensus 144 ~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~ 207 (444)
++.|+.. ..++++++++++.|++. .++.++.|+|+..||.| .|++..... . ++|.++++
T Consensus 127 ~i~gkalDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~-i--~PD~ai~v 188 (292)
T PF05343_consen 127 RIVGKALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR-I--KPDIAIAV 188 (292)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH-H---CSEEEEE
T ss_pred EEEEEeCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc-c--CCCEEEEE
Confidence 4666665 58999999999999976 45699999999999999 588877654 2 45666554
No 77
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.11 E-value=0.0095 Score=58.03 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=66.9
Q ss_pred CceEEEEeC-C-C------CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcc-hHHHHHHHHHHHHHHhcc----c
Q 013395 103 KTGVVATVG-S-G------SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH-DAHVAMLLGAAKILQEMR----E 169 (444)
Q Consensus 103 ~~n~~~~~~-~-~------~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~-k~~~a~~l~a~~~l~~~~----~ 169 (444)
-+|+.+++. + + ..|+|++.+||||..+-+ |.--|-++ .+|+.++|+.++.|.+.. .
T Consensus 193 i~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsvgADSNGSGvvaLLelarlfSkly~ypsT 261 (555)
T KOG2526|consen 193 ILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSVGADSNGSGVVALLELARLFSKLYDYPST 261 (555)
T ss_pred cceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCCCCCCCCccHHHHHHHHHHHHHHhcCccc
Confidence 368999884 2 1 249999999999997543 21123333 478999999999987643 2
Q ss_pred cCCceEEEEEecCCCCC-CChhhhhhc---ccccccceeEEec
Q 013395 170 TLKGTVVLIFQPAEERG-TGAKDMIQE---GVLENVEAIFGLH 208 (444)
Q Consensus 170 ~~~~~i~~~~~~~EE~g-~G~~~~~~~---~~~~~~d~~~~~~ 208 (444)
..++|+.|+.+.+--.. .|.+..++. .+.+++|+++|++
T Consensus 262 rakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 262 RAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred ccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 35899999999886655 588777753 1234789999874
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.77 E-value=0.0044 Score=63.10 Aligned_cols=45 Identities=31% Similarity=0.338 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhccc
Q 013395 151 DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGV 197 (444)
Q Consensus 151 k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~ 197 (444)
-+|++++|++++.|+... ++++|.|++...||.| .|+++++....
T Consensus 230 asGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 230 ASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred cHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 389999999999999764 8999999999999999 59999988744
No 79
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=96.51 E-value=0.042 Score=50.78 Aligned_cols=126 Identities=21% Similarity=0.262 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHh--cCCCCCcchHHHHHHHHHHHHHcCCceeccC----------CCceEEEEeCCCCCcEEEEEeccC
Q 013395 58 TVNWMKKMRRQIH--ENPELAYEEFETSELIRRELDQLGIAYRWPV----------AKTGVVATVGSGSPPFVALRADMD 125 (444)
Q Consensus 58 ~~~~l~~l~~~~~--~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~----------~~~n~~~~~~~~~~~~ill~~H~D 125 (444)
-..++.+.++.+. ++| .+..-.++.+||.+.|..+|+.++.+. .-.|+++.+.......+++..|||
T Consensus 49 ~~~~~~~~L~p~lv~Rvp-gs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachyd 127 (338)
T KOG3946|consen 49 DWNRLWENLLPILVPRVP-GSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYD 127 (338)
T ss_pred CHHHHHHhhhhhhccccC-CCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccc
Confidence 3345555444332 333 344557899999999999999987432 135789988555567899999999
Q ss_pred ccCCcCCCCCcccCcCCCc-cccCcchHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCCC----C---C--Chhh
Q 013395 126 ALPIQELVEWEHKSKIDGK-MHACGHDAHVAMLLGAAKILQEMR----ETLKGTVVLIFQPAEER----G---T--GAKD 191 (444)
Q Consensus 126 ~vp~~~~~~w~~~p~~~g~-i~grG~k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~----g---~--G~~~ 191 (444)
+--... +. +-+-|...++|+++..+++|.+.- ....-.+.++|..+||. | + |+++
T Consensus 128 sk~~p~-----------~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRh 196 (338)
T KOG3946|consen 128 SKIFPG-----------GMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRH 196 (338)
T ss_pred cccCCC-----------cceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHH
Confidence 873221 22 223344578999999999886532 23457799999999984 2 2 8888
Q ss_pred hhhc
Q 013395 192 MIQE 195 (444)
Q Consensus 192 ~~~~ 195 (444)
++++
T Consensus 197 LA~~ 200 (338)
T KOG3946|consen 197 LAAK 200 (338)
T ss_pred HHHH
Confidence 8765
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.31 E-value=0.011 Score=62.62 Aligned_cols=76 Identities=22% Similarity=0.317 Sum_probs=58.2
Q ss_pred CceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCc-chHHHHHHHHHHHH---HHhccccCCceEE
Q 013395 103 KTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACG-HDAHVAMLLGAAKI---LQEMRETLKGTVV 176 (444)
Q Consensus 103 ~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG-~k~~~a~~l~a~~~---l~~~~~~~~~~i~ 176 (444)
-.|+++.+ |+. +..-|++.+|.|..-. |-. ..+|.+.++...++ +++.|.+|.|+|+
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~-----------------Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~ 400 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTF-----------------GAIDPNSGTALLLEIARALSKLKKRGWRPRRTIL 400 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEecccccccc-----------------CCcCCCccHHHHHHHHHHHHHHHHcCCCccceEE
Confidence 46899999 644 6789999999997752 311 13556666666555 4567899999999
Q ss_pred EEEecCCCCCC-Chhhhhhc
Q 013395 177 LIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 177 ~~~~~~EE~g~-G~~~~~~~ 195 (444)
|+.-.+||.|. |+..+++.
T Consensus 401 F~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 401 FASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EEEccchhccccccHHHHHH
Confidence 99999999995 99888876
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.93 E-value=0.039 Score=50.87 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=52.6
Q ss_pred cEEEEEeccCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCCCC-CC
Q 013395 116 PFVALRADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEM---RETLKGTVVLIFQPAEERG-TG 188 (444)
Q Consensus 116 ~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~g-~G 188 (444)
|.|+..+.||+...-. + -+.|+ -+|++++|+++++|.+. ...++++|.|+|..+|-.| -|
T Consensus 1 ~iIlv~armDs~s~F~-----------~--~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------D--LSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------C--CCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6799999999985422 2 25565 38999999999999765 2357899999999999999 58
Q ss_pred hhhhhhc
Q 013395 189 AKDMIQE 195 (444)
Q Consensus 189 ~~~~~~~ 195 (444)
++.++.+
T Consensus 68 S~R~vyD 74 (234)
T PF05450_consen 68 SSRFVYD 74 (234)
T ss_pred hHHHHHH
Confidence 8887743
No 82
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=95.37 E-value=0.032 Score=54.75 Aligned_cols=64 Identities=20% Similarity=0.218 Sum_probs=50.0
Q ss_pred CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEeccc
Q 013395 142 DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLV 210 (444)
Q Consensus 142 ~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~ 210 (444)
++++.|+.- +.++++++.+++.|++. +++.++.++|+.+||.| .|++..... . ++|.+++++..
T Consensus 169 ~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~-i--~pD~aI~vDv~ 235 (350)
T TIGR03107 169 GKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK-F--NPDIFFAVDCS 235 (350)
T ss_pred CCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh-C--CCCEEEEEecC
Confidence 345667664 69999999999999865 57899999999999999 688875543 2 56788877643
No 83
>PRK09864 putative peptidase; Provisional
Probab=94.75 E-value=0.051 Score=53.37 Aligned_cols=61 Identities=16% Similarity=0.161 Sum_probs=48.3
Q ss_pred CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecc
Q 013395 142 DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHL 209 (444)
Q Consensus 142 ~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~ 209 (444)
++++.|+.- +.++++++.+++.|++ ++.++.++|+..||.| .|++..... . ++|.+++++.
T Consensus 166 ~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~-i--~PDiaIavDv 229 (356)
T PRK09864 166 EDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH-I--KPDVVIVLDT 229 (356)
T ss_pred CCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc-C--CCCEEEEEec
Confidence 456667664 6999999999999964 7899999999999999 688876544 2 5677777764
No 84
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.31 E-value=0.93 Score=46.38 Aligned_cols=128 Identities=17% Similarity=0.170 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CCceEEEEe-CCCCCcEEEEEeccC---
Q 013395 57 DTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GSGSPPFVALRADMD--- 125 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~~n~~~~~-~~~~~~~ill~~H~D--- 125 (444)
....+-+.+.|+++..|+.-......++++++.+++.|++++..+ +.+.+++.= |+...|.++..-+.-
T Consensus 168 ~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~ 247 (483)
T PRK00913 168 EAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKK 247 (483)
T ss_pred HHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCC
Confidence 345677789999999998777778899999999999999987322 344455554 444445555555441
Q ss_pred -ccCCcCCCCCcccC-----cCCCcccc-CcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 126 -ALPIQELVEWEHKS-----KIDGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 126 -~vp~~~~~~w~~~p-----~~~g~i~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
.+-+|. +-+|+. +..+.+.+ ++..+|.|+.+++++++.+. +++.||..++...|=.=+|
T Consensus 248 ~i~LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~ENm~~~ 313 (483)
T PRK00913 248 PIALVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACENMPSG 313 (483)
T ss_pred eEEEEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeeccCCCC
Confidence 111222 333432 11111111 22248999999999999976 5689999998888743333
No 85
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=93.89 E-value=1.8 Score=44.37 Aligned_cols=124 Identities=19% Similarity=0.171 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CCceEEEEe-CCCCCcEEEEEeccCccC
Q 013395 57 DTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GSGSPPFVALRADMDALP 128 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~~n~~~~~-~~~~~~~ill~~H~D~vp 128 (444)
....+-+.+.|+++.-|+.-......++++++.+++.|++++..+ +.+.+++.= |+...|.++..-+...-+
T Consensus 151 ~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~ 230 (468)
T cd00433 151 EAIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGA 230 (468)
T ss_pred HHHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCC
Confidence 355677888999999998777778999999999999999987432 344455554 444445555555543211
Q ss_pred CcC-----CCCCcccCcCCCc-c----ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013395 129 IQE-----LVEWEHKSKIDGK-M----HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE 184 (444)
Q Consensus 129 ~~~-----~~~w~~~p~~~g~-i----~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 184 (444)
... ..+-+|++ ||. | .-.+| ++|.|+.+++++++.+. +++.||..++...|=
T Consensus 231 ~~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l--~~~vnV~~i~~~~EN 295 (468)
T cd00433 231 SKKPIALVGKGITFDT--GGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAEL--KLPVNVVGVLPLAEN 295 (468)
T ss_pred CCCcEEEEcCceEecC--CCccccCccChhhccccchhHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 000 00222322 111 1 11223 48999999999999977 468899988888774
No 86
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=93.23 E-value=1.6 Score=41.82 Aligned_cols=111 Identities=22% Similarity=0.234 Sum_probs=70.5
Q ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC--------------------CCce-EEEEe-CCC--CCcEEE
Q 013395 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV--------------------AKTG-VVATV-GSG--SPPFVA 119 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~--------------------~~~n-~~~~~-~~~--~~~~il 119 (444)
.+.|++..-|..--.....++++++.+++.|++++..+ ..|. ++.++ +.+ ..++|+
T Consensus 2 n~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i~ 81 (311)
T PF00883_consen 2 NLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPIA 81 (311)
T ss_dssp HHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEEE
T ss_pred hHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccEE
Confidence 56888999998777788999999999999998876322 1122 44444 433 346677
Q ss_pred EEec---cCccCCcCCCCCcccCcCCCccc-cCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013395 120 LRAD---MDALPIQELVEWEHKSKIDGKMH-ACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE 184 (444)
Q Consensus 120 l~~H---~D~vp~~~~~~w~~~p~~~g~i~-grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 184 (444)
|.|- +|+=.. .- +..+.+. -++.++|.|+.+++++++.+. +++.||..++...|=
T Consensus 82 LVGKGiTFDtGG~------~l--Kp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 82 LVGKGITFDTGGL------SL--KPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEEEEEEE-TT------SS--SCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEcceEEEecCCc------cC--CCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 7662 333211 00 0111122 133369999999999999976 467899888887764
No 87
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=91.42 E-value=2.3 Score=43.27 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC------CCceEEEEe--CCCCCcEEEEEeccCccCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTGVVATV--GSGSPPFVALRADMDALPI 129 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~------~~~n~~~~~--~~~~~~~ill~~H~D~vp~ 129 (444)
....-+.+.|++..-|..-......++++.+++...|+.++..+ ..-|.+... ++...|.++.+.|.++-|.
T Consensus 187 ~~~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~ 266 (513)
T KOG2597|consen 187 FKAAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGA 266 (513)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCC
Confidence 45666777888888887666678899999999999998876322 122333333 3333466666666665432
Q ss_pred cCC-----CCCcccC-----cCCCcccc-CcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 130 QEL-----VEWEHKS-----KIDGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 130 ~~~-----~~w~~~p-----~~~g~i~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
... .+-+|+. +.++.+.+ |+.++|.|+.+++++++.+.+ ++-|+.+++.-.|-.=+|
T Consensus 267 ~~~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~sg 334 (513)
T KOG2597|consen 267 DKTILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMPSG 334 (513)
T ss_pred cceEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCCCc
Confidence 210 1223332 11112222 444689999999999988764 568899999888764444
No 88
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=90.96 E-value=3.9 Score=42.24 Aligned_cols=125 Identities=17% Similarity=0.080 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCcee-ccC-------CCceEEEEe-CCCCCcEEEEEeccCcc
Q 013395 57 DTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYR-WPV-------AKTGVVATV-GSGSPPFVALRADMDAL 127 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~-~~~-------~~~n~~~~~-~~~~~~~ill~~H~D~v 127 (444)
....+-+.+.|+++.-|+.-......++++++.+++.|++++ ..+ +.+.+++.= |+...|.++.. +|.
T Consensus 209 ~~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L-~Y~-- 285 (569)
T PTZ00412 209 NIIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVF-EYI-- 285 (569)
T ss_pred HHHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEE-EeC--
Confidence 355667788999999998766667888999988888999885 322 344455554 44434544444 442
Q ss_pred CCcCC--------CCCcccCcCCCc-c----ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 128 PIQEL--------VEWEHKSKIDGK-M----HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 128 p~~~~--------~~w~~~p~~~g~-i----~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
|.++. .+-+|+. ||. | +-.+| .+|.|+.+++++++.+. +++.||..++...|=.=+|
T Consensus 286 g~~~~~~~iaLVGKGITFDS--GGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaENm~sg 358 (569)
T PTZ00412 286 GNPRSSAATALVGKGVTFDC--GGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAENAIGP 358 (569)
T ss_pred CCCCCCCcEEEEcCceEEcC--CCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhcCCCC
Confidence 21110 0223332 111 1 11223 48999999999999876 5678999888888743333
No 89
>PRK05015 aminopeptidase B; Provisional
Probab=88.52 E-value=9 Score=38.33 Aligned_cols=122 Identities=19% Similarity=0.142 Sum_probs=72.5
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc---CCceeccC-------CCceEEEEe-CCCCCcEEEEEeccCccC
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQL---GIAYRWPV-------AKTGVVATV-GSGSPPFVALRADMDALP 128 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~---g~~~~~~~-------~~~n~~~~~-~~~~~~~ill~~H~D~vp 128 (444)
-+.+.+.|+++.-|+.-......++..++++++. +++++..+ +...+++.= |+.. |+.++.-+|. |
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~-pP~lv~L~Y~--~ 176 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSER-PPVLLALDYN--P 176 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCC-CCEEEEEEec--C
Confidence 4457789999999986666677788888888776 46665322 334455543 3333 4444444442 3
Q ss_pred CcCCC----------CCcccCcCCCc-c----ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 129 IQELV----------EWEHKSKIDGK-M----HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 129 ~~~~~----------~w~~~p~~~g~-i----~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
.++.+ +-+|+. ||. | .-.+| .+|.|+.++++.++.+. .++.+|..++...|=.-+|
T Consensus 177 ~g~~~~~v~~aLVGKGITFDS--GG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aENmisg 250 (424)
T PRK05015 177 TGDPDAPVYACLVGKGITFDS--GGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAENLISG 250 (424)
T ss_pred CCCCCCCeeEEEecCceEecC--CCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEecccCCCC
Confidence 22110 122221 111 1 11223 48999999999888776 5788999998888754333
No 90
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=86.73 E-value=0.37 Score=46.15 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=53.7
Q ss_pred cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013395 349 MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 425 (444)
Q Consensus 349 ~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~ 425 (444)
..++.+.+.+.+++++. +.+...+ ....++||++.+.. .+|+....++.. ..|++.|.++++++...
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~r--------y~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCR--------YMHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEB--------STTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEecccc--------cCCCcceEEEHHHHHHH
Confidence 45777999999999987 8876543 56788999988875 277777667764 49999999999999987
Q ss_pred HHH
Q 013395 426 AVI 428 (444)
Q Consensus 426 ~~~ 428 (444)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 91
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=84.58 E-value=26 Score=35.95 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcC-CceeccC-------CCceEEEEe-CCCCCcEEEEEecc---
Q 013395 57 DTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLG-IAYRWPV-------AKTGVVATV-GSGSPPFVALRADM--- 124 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g-~~~~~~~-------~~~n~~~~~-~~~~~~~ill~~H~--- 124 (444)
...-+-+.+.|+++..|..--.....++. ++.|++.+ ++++..+ +.+.+++.= |+...|+++..-.-
T Consensus 164 ~ai~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~g~~ 242 (485)
T COG0260 164 EAIAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYNGKG 242 (485)
T ss_pred HHHHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcCCCC
Confidence 35567788999999999876666777777 77777765 7766322 333444443 33333443322211
Q ss_pred C-ccC---CcCCCCCcccCcCCCc-----cccCcch---HHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 013395 125 D-ALP---IQELVEWEHKSKIDGK-----MHACGHD---AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (444)
Q Consensus 125 D-~vp---~~~~~~w~~~p~~~g~-----i~grG~k---~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (444)
+ -.| +|. +-+|++ ||. -+-++|| +|.|+.++++.++.+. +++.||+.+....|=.
T Consensus 243 ~~~~~iaLVGK--GitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~ENm 309 (485)
T COG0260 243 KAKKPIALVGK--GITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVENM 309 (485)
T ss_pred CCCceEEEEcC--ceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeeccC
Confidence 0 011 111 222221 111 0234454 8999999999999987 5778898888877743
No 92
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=82.64 E-value=25 Score=34.23 Aligned_cols=71 Identities=24% Similarity=0.240 Sum_probs=45.6
Q ss_pred ceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 013395 104 TGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAE 183 (444)
Q Consensus 104 ~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 183 (444)
+|+++.-++ ..+++++.+|.|+=..|. ++.=.|+++.+.++..|..++. ...++..++|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~----------------tDN~lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGF----------------TDNILGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhcc----------------cchhhhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 355554432 357899999999876432 2223567888888888876543 2456666777
Q ss_pred CCCC----------Chhhhhhc
Q 013395 184 ERGT----------GAKDMIQE 195 (444)
Q Consensus 184 E~g~----------G~~~~~~~ 195 (444)
|.|+ |++.++++
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred ccCCCCCcceeecccchHHHhh
Confidence 7652 66766655
No 93
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=82.33 E-value=35 Score=35.39 Aligned_cols=90 Identities=12% Similarity=0.187 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCceeccCC---------CceEEEEe--C-CCCCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcch
Q 013395 84 ELIRRELDQLGIAYRWPVA---------KTGVVATV--G-SGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHD 151 (444)
Q Consensus 84 ~~i~~~l~~~g~~~~~~~~---------~~n~~~~~--~-~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k 151 (444)
.|....+++.|.++..+.. +.|+++.+ + +++...+++...++--- |- ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~vP~~~~~------------------~~-~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLVVPYGRSS------------------GS-NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEEEecccCC------------------Cc-ch
Confidence 4677888888988764432 57999998 2 23457888864333221 11 14
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhc
Q 013395 152 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQE 195 (444)
Q Consensus 152 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~ 195 (444)
++++-+++.++.++.. .-+..+|+++|+.++- -|....+++
T Consensus 153 ~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred hHHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHHH
Confidence 5677778888887764 3589999999998843 355556665
No 94
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=78.59 E-value=4.4 Score=41.50 Aligned_cols=81 Identities=9% Similarity=-0.058 Sum_probs=59.5
Q ss_pred cCCHHHHHHHHHHHHHHhCCcccc--cCCCCCcCcHHHHHHH-H--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 013395 349 MNDVRIYQHVRRVTAEILGEENVK--LAPIFTGSEDFAFFLD-E--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLP 423 (444)
Q Consensus 349 ~~d~~l~~~~~~~~~~~~g~~~~~--~~~~~~g~tD~~~~~~-~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~ 423 (444)
.+|..+...+++.+++. +.+... .....++++|++.+.. . +|++-++++. -.+|++.|-+...++.
T Consensus 372 ~td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~--------l~MHS~rE~~~~~D~~ 442 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQ--------LAMHSIREMCGVVDIY 442 (465)
T ss_pred ccCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhh--------cccccHHHHccHHHHH
Confidence 35788888999998886 776332 1234556888888765 2 6766554443 3499999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 013395 424 IGAVIHAAFAHSYLV 438 (444)
Q Consensus 424 ~~~~~~~~~l~~~~~ 438 (444)
..++++..++..+..
T Consensus 443 ~~~~l~~af~~~~~~ 457 (465)
T PTZ00371 443 YLVKLIKAFFTNYSK 457 (465)
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999876543
No 95
>PRK02256 putative aminopeptidase 1; Provisional
Probab=73.25 E-value=4 Score=41.71 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCC----CCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAP----IFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
.+..+...+.+.+++. +.+...... ...|+||...+.+. +|++-.+++. -.+||+.|-+...++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~--------l~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVAL--------LSMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhh--------hccccHHHHhhHHHHHH
Confidence 4777888888888876 776432111 23678995555532 7776554444 34999999999999999
Q ss_pred HHHHHHHHHH
Q 013395 425 GAVIHAAFAH 434 (444)
Q Consensus 425 ~~~~~~~~l~ 434 (444)
.++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 96
>PRK02813 putative aminopeptidase 2; Provisional
Probab=70.88 E-value=5.7 Score=40.27 Aligned_cols=76 Identities=11% Similarity=-0.038 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHHHhCCccccc--CCCCCcCcHHHHHHH-H--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKL--APIFTGSEDFAFFLD-E--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~--~~~~~g~tD~~~~~~-~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
+|......+++.+++. +.+.... ....+|++|++.+.. . +|++-.+++. -.+|++-|-+...++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~--------l~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPM--------LAMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhh--------cccccHHHHccHHHHHH
Confidence 4777888888888876 7664321 123357888888765 2 7766554443 34999999999999999
Q ss_pred HHHHHHHHHH
Q 013395 425 GAVIHAAFAH 434 (444)
Q Consensus 425 ~~~~~~~~l~ 434 (444)
.++++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999988764
No 97
>PRK02256 putative aminopeptidase 1; Provisional
Probab=62.98 E-value=12 Score=38.20 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=30.0
Q ss_pred CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC
Q 013395 142 DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (444)
Q Consensus 142 ~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (444)
++.|.|.+- ..++.+++.++..+. .++..+.++++..||.|+
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC
Confidence 356667665 366777777766543 456789999999999994
No 98
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=58.56 E-value=29 Score=36.02 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=52.4
Q ss_pred CceEEEEe--C-CCCCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEE
Q 013395 103 KTGVVATV--G-SGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIF 179 (444)
Q Consensus 103 ~~n~~~~~--~-~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 179 (444)
+.|++|.+ + +++...+++...++..- +....++++.+++.++++++.. -+..+|+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~------------------~~~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD------------------GEYNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC------------------cccchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 56899988 2 33457899988776432 1112468999999999999764 4799999999
Q ss_pred ecCCCCCCChhhhhhcc
Q 013395 180 QPAEERGTGAKDMIQEG 196 (444)
Q Consensus 180 ~~~EE~g~G~~~~~~~~ 196 (444)
+.+|. .|.+..+++.
T Consensus 64 ~~~~~--~g~~awl~~Y 78 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEAY 78 (504)
T ss_pred cCCcc--hHHHHHHHHH
Confidence 87654 3677777763
No 99
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=46.66 E-value=69 Score=33.15 Aligned_cols=42 Identities=10% Similarity=0.155 Sum_probs=34.0
Q ss_pred cEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 013395 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG 324 (444)
Q Consensus 277 ~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 324 (444)
+|+|++.++ .--+.+++.+++|+++..+.+++.+++++..+.
T Consensus 344 ~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~ 385 (485)
T PRK15026 344 TSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKL 385 (485)
T ss_pred eeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHHH
Confidence 466666654 334679999999999999999999999988765
No 100
>PRK06156 hypothetical protein; Provisional
Probab=43.52 E-value=1.3e+02 Score=31.49 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=21.0
Q ss_pred EEEEEEeecCcccccccCcEEEEE
Q 013395 278 VVSVAMINGGSSYNMIPDSATVAG 301 (444)
Q Consensus 278 t~~v~~i~gG~~~nviP~~a~~~~ 301 (444)
+.++..++||...|+||+.|.+.+
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~ 263 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATL 263 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEE
Confidence 466788999999999999999884
No 101
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=38.41 E-value=1.2e+02 Score=30.11 Aligned_cols=68 Identities=18% Similarity=0.154 Sum_probs=40.2
Q ss_pred EEEEe--CCCCCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 013395 106 VVATV--GSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAE 183 (444)
Q Consensus 106 ~~~~~--~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 183 (444)
-++++ ++...+.|+|.+|+.+=.- +...=+|++..+..++.|++.. ...+.+|+|.++
T Consensus 118 ~ygE~~ipG~s~~EillsthiCHPsm-----------------ANdnLSG~~v~~~La~~L~~~~--~rytYRflf~Pe- 177 (386)
T PF09940_consen 118 TYGEFVIPGESDEEILLSTHICHPSM-----------------ANDNLSGPAVLTFLAKWLKQLP--NRYTYRFLFVPE- 177 (386)
T ss_dssp EEEEEEE--SSS-EEEEEEE----S------------------TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-T-
T ss_pred eEEEEEecCCCCCeEEEEEeccCccc-----------------ccccccHHHHHHHHHHHHhcCC--cCceEEEEEccc-
Confidence 45555 5566789999999986431 2222378999999999998764 449999999984
Q ss_pred CCCCChhhhhhc
Q 013395 184 ERGTGAKDMIQE 195 (444)
Q Consensus 184 E~g~G~~~~~~~ 195 (444)
+ -|+-.++.+
T Consensus 178 -T-IGsI~yLsk 187 (386)
T PF09940_consen 178 -T-IGSITYLSK 187 (386)
T ss_dssp -T-HHHHHHHHH
T ss_pred -c-HHHHHHHHH
Confidence 2 255444443
No 102
>PRK02813 putative aminopeptidase 2; Provisional
Probab=33.88 E-value=1.3e+02 Score=30.64 Aligned_cols=50 Identities=20% Similarity=0.373 Sum_probs=34.9
Q ss_pred chHHHHHHHHHHHHHcCCcee-----cc--C--------CCceEEEEe-CCCC---CcEEEEEeccCcc
Q 013395 78 EEFETSELIRRELDQLGIAYR-----WP--V--------AKTGVVATV-GSGS---PPFVALRADMDAL 127 (444)
Q Consensus 78 ~e~~~~~~i~~~l~~~g~~~~-----~~--~--------~~~n~~~~~-~~~~---~~~ill~~H~D~v 127 (444)
.+..+.+++++.|++.||.-. |. . +...++|.. |.+. ..--++.+|.|..
T Consensus 20 t~~hav~~~~~~L~~~Gf~~l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP 88 (428)
T PRK02813 20 SPFHAVANVAQRLEAAGFTELDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSP 88 (428)
T ss_pred CHHHHHHHHHHHHHHcCCeeccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCC
Confidence 567889999999999999742 11 1 123577766 6553 2357889999975
No 103
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=33.04 E-value=2.1e+02 Score=21.50 Aligned_cols=59 Identities=5% Similarity=-0.005 Sum_probs=37.2
Q ss_pred cEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHH
Q 013395 296 SATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVR 359 (444)
Q Consensus 296 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 359 (444)
+.+..|-||.+++.+-.++.+.|.+.++-. +-.+.+.+..+......+. .|.++-..+.
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aws 66 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVWS 66 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHHH
Confidence 455678899999999999999999987532 2245565543332334344 4554444433
No 104
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=28.38 E-value=2.2e+02 Score=29.28 Aligned_cols=51 Identities=20% Similarity=0.297 Sum_probs=34.6
Q ss_pred cchHHHHHHHHHHHHHcCCcee-----cc--C--------CCceEEEEe-CCCC----CcEEEEEeccCcc
Q 013395 77 YEEFETSELIRRELDQLGIAYR-----WP--V--------AKTGVVATV-GSGS----PPFVALRADMDAL 127 (444)
Q Consensus 77 ~~e~~~~~~i~~~l~~~g~~~~-----~~--~--------~~~n~~~~~-~~~~----~~~ill~~H~D~v 127 (444)
.-+..+.+++++.|++.||.-- |. . +...++|.. |.+. ..--+..+|.|.-
T Consensus 20 ~t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP 90 (465)
T PTZ00371 20 GSPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDSP 90 (465)
T ss_pred CCHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEeccCC
Confidence 3567899999999999999742 11 1 123577766 6542 2356888999974
No 105
>PF14133 DUF4300: Domain of unknown function (DUF4300)
Probab=26.15 E-value=3e+02 Score=25.65 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=40.5
Q ss_pred HhcCCCCCc-chHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCcc
Q 013395 69 IHENPELAY-EEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDAL 127 (444)
Q Consensus 69 ~~~~ps~s~-~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~v 127 (444)
..++|...- +...-++-+.+.++++|++. .+.+..+|-.+-.++....+|.||.=+.
T Consensus 135 Fs~i~t~~t~D~~~h~~~i~k~wk~rgi~F--~~~k~slISV~~h~~d~~~lFvGH~GVL 192 (250)
T PF14133_consen 135 FSRIPTENTKDIKVHAEKIQKYWKERGIKF--NNDKASLISVFLHDPDDNSLFVGHTGVL 192 (250)
T ss_pred hCcCCccccCCHHHHHHHHHHHHHHcCcee--CCCceEEEEEEEEcCCCCeEEeeeEEEE
Confidence 445776443 34567788999999999998 3345556666622256789999999776
No 106
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=23.40 E-value=1.6e+02 Score=22.43 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCce
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAY 97 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~ 97 (444)
.+++++++.++..+.-+ ++.++|++|+++|++. |-..
T Consensus 17 ~~~~~~~~~~~a~~~~~---~~~eiA~~iK~~lD~~yG~~W 54 (89)
T PF01221_consen 17 MQEEAIELAKEALKKYQ---DEKEIAEFIKQELDKKYGPTW 54 (89)
T ss_dssp HHHHHHHHHHHHHHHCS---SHHHHHHHHHHHHHHHHSS-E
T ss_pred HHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHhcccCCce
Confidence 33444455555444211 6688999999999876 5443
No 107
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=23.28 E-value=1.4e+02 Score=30.44 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=20.0
Q ss_pred EEeecCcccccccCcEEEEEEEeC
Q 013395 282 AMINGGSSYNMIPDSATVAGTFRA 305 (444)
Q Consensus 282 ~~i~gG~~~nviP~~a~~~~diR~ 305 (444)
..+++|...|.+|..|++.+-.+.
T Consensus 194 ~~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 194 ESFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred EEEeCCCcCCccCcceEEEEeccc
Confidence 346788899999999999997764
No 108
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=23.08 E-value=2e+02 Score=28.98 Aligned_cols=77 Identities=14% Similarity=-0.005 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHhCCcccc--cCCCCCcCcHHHHH-HHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVK--LAPIFTGSEDFAFF-LDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~--~~~~~~g~tD~~~~-~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
+|.+....+++++++. |.+... .-...++++-++.. ... ++++= +|+.. -.+|++-|-....++..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tID--iG~~~------LsMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTID--IGPAL------LSMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceee--cchhh------hhhccHHHHcchhHHHH
Confidence 4777888888888886 665322 11222333333333 222 55443 34332 33899999999999999
Q ss_pred HHHHHHHHHHH
Q 013395 425 GAVIHAAFAHS 435 (444)
Q Consensus 425 ~~~~~~~~l~~ 435 (444)
+.++|.+++.+
T Consensus 425 ~~~~~~aFf~~ 435 (437)
T COG1362 425 AYKALSAFFEN 435 (437)
T ss_pred HHHHHHHHHhc
Confidence 99999888754
No 109
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=22.72 E-value=1.2e+02 Score=28.17 Aligned_cols=85 Identities=21% Similarity=0.316 Sum_probs=51.7
Q ss_pred CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHH--HhccccCCceEEEEEecCCCC------
Q 013395 114 SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKIL--QEMRETLKGTVVLIFQPAEER------ 185 (444)
Q Consensus 114 ~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l--~~~~~~~~~~i~~~~~~~EE~------ 185 (444)
..|++.+.|-+-.+.+... .-|. =.++++.++++-.|++.+ +++|..++++|++.---+--.
T Consensus 30 ~aptlGIiGRLGgigARP~--------~iGl--VSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE--------RIGL--VSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc--------ceee--eecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 4589999988876654221 0011 012367888888888776 567889999999975433321
Q ss_pred -----CC--ChhhhhhcccccccceeEEec
Q 013395 186 -----GT--GAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 186 -----g~--G~~~~~~~~~~~~~d~~~~~~ 208 (444)
++ +...+.+.......|+++.++
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEe
Confidence 22 334444443444678888764
No 110
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=22.71 E-value=3.3e+02 Score=20.36 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=27.9
Q ss_pred cEEEEEEEeCCChhhHHHHHHHHHHHHHHHHH
Q 013395 296 SATVAGTFRAFNKKRFNALRERIEEIIKGQAA 327 (444)
Q Consensus 296 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~ 327 (444)
+++++|.+|.+++.+..++.+.|.+.+.-.++
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~ 35 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQ 35 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChh
Confidence 68899999999999999999999998865443
No 111
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=21.80 E-value=1.1e+02 Score=31.00 Aligned_cols=68 Identities=19% Similarity=0.163 Sum_probs=41.6
Q ss_pred cEEEEEeccCccCC-cCCCCCcccC------cCCCccc-cCcchH-HHHHHHHHHHHHHhccccCCceEEEEEecCCCCC
Q 013395 116 PFVALRADMDALPI-QELVEWEHKS------KIDGKMH-ACGHDA-HVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG 186 (444)
Q Consensus 116 ~~ill~~H~D~vp~-~~~~~w~~~p------~~~g~i~-grG~k~-~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 186 (444)
..+.|.||+|.||. +..+...+.+ +++.++- .+|++. +++..++.++- -..++...++.+||.+
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~-------~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSP-------EHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHHhhcCc-------ccCCceeeeecceEEe
Confidence 67889999999984 3333333322 4556666 577654 22222222211 3567889999999988
Q ss_pred C-Chh
Q 013395 187 T-GAK 190 (444)
Q Consensus 187 ~-G~~ 190 (444)
. |+.
T Consensus 135 ~dGa~ 139 (414)
T COG2195 135 TDGAT 139 (414)
T ss_pred ccCcc
Confidence 4 665
No 112
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=20.58 E-value=65 Score=27.73 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=27.3
Q ss_pred HhcCCCCCcchHHHHHHHHHHHHHcCCceeccC
Q 013395 69 IHENPELAYEEFETSELIRRELDQLGIAYRWPV 101 (444)
Q Consensus 69 ~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~ 101 (444)
|+-.-+..|+-.++|++|+..|++.|.+++..+
T Consensus 4 LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 4 LILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred EEEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 344556778889999999999999999998654
Done!