Query 013395
Match_columns 444
No_of_seqs 190 out of 1644
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 09:47:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 1.1E-58 3.9E-63 466.4 36.4 378 58-440 24-405 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 1.5E-57 5.1E-62 456.3 39.0 372 56-439 28-402 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 2.2E-57 7.5E-62 460.2 34.2 371 58-441 12-436 (445)
4 3pfo_A Putative acetylornithin 100.0 2.2E-52 7.4E-57 423.0 32.0 372 44-440 12-431 (433)
5 3ram_A HMRA protein; two-domai 100.0 5.1E-51 1.7E-55 407.2 32.0 359 47-441 5-377 (394)
6 1vgy_A Succinyl-diaminopimelat 100.0 1.7E-50 5.7E-55 404.0 33.0 360 60-440 6-381 (393)
7 3isz_A Succinyl-diaminopimelat 100.0 8E-50 2.8E-54 396.8 34.9 360 59-439 2-377 (377)
8 3dlj_A Beta-Ala-His dipeptidas 100.0 1.1E-49 3.6E-54 408.4 35.1 365 58-438 23-483 (485)
9 1cg2_A Carboxypeptidase G2; me 100.0 7.4E-50 2.5E-54 399.3 29.0 356 58-439 17-392 (393)
10 3rza_A Tripeptidase; phosphory 100.0 3.4E-49 1.1E-53 394.8 29.8 351 58-439 22-394 (396)
11 3gb0_A Peptidase T; NP_980509. 100.0 1.5E-48 5.3E-53 387.1 30.8 346 59-436 5-371 (373)
12 3pfe_A Succinyl-diaminopimelat 100.0 3.9E-48 1.3E-52 395.4 34.2 363 60-440 18-472 (472)
13 2zog_A Cytosolic non-specific 100.0 5.7E-48 1.9E-52 395.5 31.5 365 58-440 18-478 (479)
14 3tx8_A Succinyl-diaminopimelat 100.0 8.4E-49 2.9E-53 388.4 24.3 342 60-434 13-368 (369)
15 3ife_A Peptidase T; metallopep 100.0 2.8E-47 9.5E-52 385.3 33.3 352 58-439 25-433 (434)
16 2pok_A Peptidase, M20/M25/M40 100.0 1.9E-47 6.6E-52 391.5 30.4 364 58-436 41-480 (481)
17 2f7v_A Aectylcitrulline deacet 100.0 1.1E-47 3.9E-52 380.2 26.7 337 58-435 7-367 (369)
18 3ct9_A Acetylornithine deacety 100.0 6.8E-48 2.3E-52 379.8 24.1 333 58-437 9-355 (356)
19 1fno_A Peptidase T; metallo pe 100.0 8.7E-46 3E-50 372.7 29.9 350 61-441 3-409 (417)
20 2rb7_A Peptidase, M20/M25/M40 100.0 2.1E-46 7.3E-51 370.2 24.4 336 59-439 5-361 (364)
21 3khx_A Putative dipeptidase sa 100.0 1.5E-45 5.1E-50 377.7 27.4 352 58-439 32-491 (492)
22 1z2l_A Allantoate amidohydrola 100.0 1.9E-44 6.5E-49 363.6 31.4 346 58-440 7-413 (423)
23 3n5f_A L-carbamoylase, N-carba 100.0 6.6E-44 2.3E-48 357.9 33.0 341 60-438 5-407 (408)
24 2qyv_A XAA-His dipeptidase; YP 100.0 7.2E-44 2.5E-48 365.5 33.1 348 60-437 11-485 (487)
25 2v8h_A Beta-alanine synthase; 100.0 1.3E-44 4.5E-49 369.4 26.5 346 60-439 32-448 (474)
26 3mru_A Aminoacyl-histidine dip 100.0 1.3E-43 4.3E-48 363.0 29.5 348 59-437 13-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 5.8E-42 2E-46 350.0 30.3 354 58-441 12-469 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 7.3E-32 2.5E-36 254.8 20.3 250 60-438 6-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 5.7E-31 1.9E-35 248.7 22.3 250 58-438 4-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 6.1E-26 2.1E-30 204.2 15.1 172 60-234 10-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 2.2E-24 7.6E-29 210.5 12.6 249 65-439 3-336 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 1.9E-21 6.7E-26 191.9 20.7 256 60-439 7-355 (373)
33 2wyr_A Cobalt-activated peptid 99.9 6.3E-22 2.2E-26 192.5 14.9 239 62-435 4-331 (332)
34 2wzn_A TET3, 354AA long hypoth 99.9 1.2E-24 4.2E-29 211.1 -8.9 322 64-436 13-347 (354)
35 2gre_A Deblocking aminopeptida 99.9 1.5E-20 5.1E-25 184.0 18.2 241 59-435 5-344 (349)
36 1y0y_A FRV operon protein FRVX 99.8 2.4E-20 8.1E-25 182.9 17.1 247 62-439 8-351 (353)
37 1vho_A Endoglucanase; structur 99.8 1.1E-19 3.9E-24 177.6 17.6 248 61-441 6-339 (346)
38 1ylo_A Hypothetical protein SF 99.8 3.8E-18 1.3E-22 167.0 20.7 250 64-438 7-338 (348)
39 3cpx_A Aminopeptidase, M42 fam 99.8 7.3E-19 2.5E-23 169.8 11.4 238 58-435 15-320 (321)
40 1tkj_A Aminopeptidase, SGAP; d 99.8 1.5E-17 5E-22 157.9 20.1 132 59-207 6-159 (284)
41 1rtq_A Bacterial leucyl aminop 99.7 2.3E-16 7.7E-21 150.9 13.8 128 59-195 19-164 (299)
42 3kl9_A PEPA, glutamyl aminopep 99.6 1.2E-14 4.2E-19 141.3 20.0 246 61-436 4-344 (355)
43 3tc8_A Leucine aminopeptidase; 99.6 1.9E-14 6.4E-19 137.6 16.1 130 60-195 25-185 (309)
44 3gux_A Putative Zn-dependent e 99.6 5.6E-14 1.9E-18 134.3 15.3 131 59-195 26-188 (314)
45 2vpu_A TET3, 354AA long hypoth 99.5 2.7E-13 9.2E-18 131.7 16.5 66 62-129 11-77 (354)
46 2afw_A Glutaminyl-peptide cycl 99.5 1.1E-13 3.7E-18 133.9 13.7 126 60-195 31-190 (329)
47 3isx_A Endoglucanase; TM1050, 99.4 4.9E-12 1.7E-16 121.9 19.6 66 62-129 13-78 (343)
48 4fuu_A Leucine aminopeptidase; 99.3 2.4E-11 8.1E-16 116.4 15.2 109 72-186 40-162 (309)
49 3pb6_X Glutaminyl-peptide cycl 99.3 1.5E-11 5.2E-16 118.0 12.9 116 69-195 50-194 (330)
50 4fai_A CG5976, isoform B; alph 99.3 3.9E-11 1.3E-15 115.8 15.8 123 60-195 38-187 (330)
51 4f9u_A CG32412; alpha/beta hyd 99.2 5.9E-11 2E-15 113.9 13.0 122 62-195 13-163 (312)
52 1q7l_B Aminoacylase-1; catalys 99.0 7.5E-10 2.6E-14 85.1 5.7 79 353-439 2-81 (88)
53 3iib_A Peptidase M28; YP_92679 98.8 1.4E-08 4.7E-13 102.0 9.3 100 80-196 203-317 (444)
54 2ek8_A Aminopeptidase; metallo 98.8 3E-08 1E-12 98.9 11.0 97 80-195 171-285 (421)
55 3kas_A Transferrin receptor pr 98.2 3.2E-06 1.1E-10 87.8 8.8 78 103-196 266-350 (640)
56 3fed_A Glutamate carboxypeptid 98.2 2.6E-06 9.1E-11 89.4 7.9 78 103-196 312-395 (707)
57 3k9t_A Putative peptidase; str 94.4 0.2 6.9E-06 48.5 10.0 82 104-207 166-251 (435)
58 1gyt_A Cytosol aminopeptidase; 90.8 4.6 0.00016 40.3 14.5 119 58-188 179-329 (503)
59 3h8g_F Cytosol aminopeptidase; 90.3 5.4 0.00018 39.6 14.3 117 57-185 177-323 (497)
60 2hc9_A Leucine aminopeptidase 89.8 6.3 0.00022 39.0 14.2 119 58-188 165-311 (491)
61 3kzw_A Cytosol aminopeptidase; 89.1 4.5 0.00015 40.1 12.6 116 58-185 195-339 (515)
62 3jru_B Probable cytosol aminop 88.7 6.5 0.00022 38.9 13.5 115 58-184 174-317 (490)
63 3vat_A Dnpep, aspartyl aminope 88.3 0.79 2.7E-05 45.7 6.7 80 350-438 404-488 (496)
64 1lam_A Leucine aminopeptidase; 88.0 7.3 0.00025 38.6 13.4 117 58-188 159-309 (484)
65 3ij3_A Cytosol aminopeptidase; 87.3 7.6 0.00026 38.2 12.8 114 58-185 165-306 (482)
66 4efd_A Aminopeptidase; structu 87.2 5.8 0.0002 39.3 12.0 118 59-188 203-349 (522)
67 2glf_A Probable M18-family ami 87.2 0.58 2E-05 46.2 5.1 77 350-435 368-449 (450)
68 3kr4_A M17 leucyl aminopeptida 86.2 13 0.00045 36.9 13.9 122 58-188 203-353 (528)
69 3pei_A Cytosol aminopeptidase; 86.2 7.8 0.00027 38.3 12.4 115 58-184 162-306 (486)
70 2ijz_A Probable M18-family ami 83.1 0.34 1.1E-05 47.7 1.1 77 349-434 342-423 (428)
71 4eme_A M18 aspartyl aminopepti 82.0 2 7E-05 43.4 6.3 80 350-437 472-561 (571)
72 1y7e_A Probable M18-family ami 81.7 0.9 3.1E-05 45.0 3.6 75 350-433 377-456 (458)
73 2ijz_A Probable M18-family ami 79.9 0.56 1.9E-05 46.1 1.4 60 68-127 7-85 (428)
74 1y7e_A Probable M18-family ami 73.4 2.5 8.7E-05 41.8 4.1 49 78-127 34-99 (458)
75 2glf_A Probable M18-family ami 72.6 4.9 0.00017 39.6 5.9 50 78-127 32-96 (450)
76 2glj_A Probable M18-family ami 67.9 2.8 9.7E-05 41.5 3.0 75 350-433 380-459 (461)
77 3iib_A Peptidase M28; YP_92679 66.8 7.6 0.00026 38.2 5.9 65 375-443 369-437 (444)
78 1rtq_A Bacterial leucyl aminop 66.3 20 0.0007 32.8 8.5 87 351-441 198-291 (299)
79 2glj_A Probable M18-family ami 58.6 5.6 0.00019 39.3 3.2 32 152-187 264-295 (461)
80 2jvf_A De novo protein M7; tet 54.4 46 0.0016 23.1 6.3 65 295-369 15-79 (96)
81 3fed_A Glutamate carboxypeptid 54.3 27 0.00093 36.4 7.6 51 44-98 13-66 (707)
82 3mru_A Aminoacyl-histidine dip 51.2 23 0.00079 35.1 6.4 43 276-324 347-389 (490)
83 2ek8_A Aminopeptidase; metallo 44.8 17 0.00057 35.4 4.1 72 359-440 328-403 (421)
84 3vat_A Dnpep, aspartyl aminope 34.7 1E+02 0.0036 30.5 7.9 52 76-127 49-119 (496)
85 4f9u_A CG32412; alpha/beta hyd 29.0 53 0.0018 30.2 4.6 58 377-440 240-301 (312)
86 3kas_A Transferrin receptor pr 25.1 39 0.0013 34.8 3.1 36 62-97 20-60 (640)
87 4eme_A M18 aspartyl aminopepti 24.3 1.4E+02 0.0048 30.1 6.8 50 78-127 22-91 (571)
88 3tc8_A Leucine aminopeptidase; 23.0 2.5E+02 0.0087 25.5 8.1 80 354-435 222-308 (309)
89 4ds1_A Dynein light chain 1, c 20.5 1.2E+02 0.0042 22.5 4.3 37 59-98 26-63 (97)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=1.1e-58 Score=466.41 Aligned_cols=378 Identities=60% Similarity=0.992 Sum_probs=310.9
Q ss_pred hH--HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEeccCccCCcCCCC
Q 013395 58 TV--NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADMDALPIQELVE 134 (444)
Q Consensus 58 ~~--~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~~ 134 (444)
.. +++++++++++++||++++|.++++||+++|+++|++++.....+|+++++ ++++ |+|+|+|||||||+++++.
T Consensus 24 ~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~-~~i~l~aH~D~vp~~~~~~ 102 (418)
T 1xmb_A 24 PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEP-PFVALRADMDALPIQEGVE 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSS-CEEEEEEECCCBSCCCCCC
T ss_pred hhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCC-CEEEEEecccccCCCCCCC
Confidence 56 889999999999999999999999999999999999988665578999999 4444 8999999999999988777
Q ss_pred CcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCC
Q 013395 135 WEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKY 213 (444)
Q Consensus 135 w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (444)
|++.+.++|++||||+|++++++|+|+++|++.+..++++|.|+|+++|| | .|++.+++++.++++|+++++|.++++
T Consensus 103 ~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~~G~~~~~~~g~~~~~d~~i~~~~~~~~ 181 (418)
T 1xmb_A 103 WEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGALKNVEAIFGIHLSARI 181 (418)
T ss_dssp STTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT-TTCHHHHHHHTTTTTTEEEEEEEEEEEEE
T ss_pred CCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc-ccccHHHHHHcCCcCCCCEEEEEecCCCC
Confidence 88887789999999999999999999999999888899999999999999 6 599999998777678999998876666
Q ss_pred CCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccc
Q 013395 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (444)
Q Consensus 214 ~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nvi 293 (444)
+.|.+..+.+...+|..+++|+++|+++|||.|+.|+||+..+++++..|+++..+..++....+++++.++||.+.|+|
T Consensus 182 ~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i~gG~~~NvI 261 (418)
T 1xmb_A 182 PFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVI 261 (418)
T ss_dssp ETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEEC--------
T ss_pred CCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEecCcCCcC
Confidence 77766556666678999999999999999999999999999999999999987544444445679999999999999999
Q ss_pred cCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccccc
Q 013395 294 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL 373 (444)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~ 373 (444)
|++|++.+|+|+.+ +.+++.++|++++++.+..+++++++++....++++|++..|+++++.+++++++++|.+++..
T Consensus 262 P~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~ 339 (418)
T 1xmb_A 262 PDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVE 339 (418)
T ss_dssp CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGGEEE
T ss_pred CCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHHhcCCcceec
Confidence 99999999999999 8999999999999988888888887775421123477788899999999999999889875322
Q ss_pred CCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 374 APIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 374 ~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
+...+|++|+++|.+.+|++++++|+++.+ +....+|++||+++++++.+++++|+.++.+++.++
T Consensus 340 ~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 405 (418)
T 1xmb_A 340 AAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK 405 (418)
T ss_dssp CCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 467889999999988899877778886532 234679999999999999999999999999998754
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.5e-57 Score=456.30 Aligned_cols=372 Identities=40% Similarity=0.649 Sum_probs=307.8
Q ss_pred hhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-CCceEEEEe-CCCCCcEEEEEeccCccCCcCCC
Q 013395 56 QDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-AKTGVVATV-GSGSPPFVALRADMDALPIQELV 133 (444)
Q Consensus 56 ~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-~~~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~ 133 (444)
+++.+++++++++++++||++++|.++++||+++|+++|++++... +++|+++++ +++++|+|+|+||+||||+++++
T Consensus 28 ~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~ 107 (404)
T 1ysj_A 28 KAFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQT 107 (404)
T ss_dssp HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCC
Confidence 3466789999999999999999999999999999999999986443 467999999 55456899999999999987643
Q ss_pred CCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCC
Q 013395 134 EWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKY 213 (444)
Q Consensus 134 ~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (444)
.+|+.+..+|++||||+|++++++|+|+++|++.+..++++|.|+|+++||.+.|++.+++++.++++|+++++|.+++.
T Consensus 108 ~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~ 187 (404)
T 1ysj_A 108 NLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDL 187 (404)
T ss_dssp CCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTS
T ss_pred CCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCC
Confidence 34444456799999999999999999999999988889999999999999996799999998777778999998877776
Q ss_pred CCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccc
Q 013395 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (444)
Q Consensus 214 ~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nvi 293 (444)
+.|.+....|...+|..+++|+++|+++|||.|+.|.||+..+++++..|+++..+..++....+++++.|+||.+.|+|
T Consensus 188 ~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvI 267 (404)
T 1ysj_A 188 PVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVI 267 (404)
T ss_dssp CTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSC
T ss_pred CCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCcee
Confidence 66776666555567899999999999999999999999999999999999876544444555679999999999999999
Q ss_pred cCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHH-hCCcccc
Q 013395 294 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEI-LGEENVK 372 (444)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~g~~~~~ 372 (444)
|++|++.+|+|+.+.++.+++.++|++++++.+..+++++++++. ..+|++..|+++++.++++++++ +|.++.
T Consensus 268 P~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~- 342 (404)
T 1ysj_A 268 PDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWF----PYLPSVQNDGTFLNAASEAAARLGYQTVHA- 342 (404)
T ss_dssp CSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE----EEECCEEECGGGHHHHHHHHHHTTCEEEEC-
T ss_pred cCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEe----cCCCCccCCHHHHHHHHHHHHHhcCCcccc-
Confidence 999999999999999999999999999999888888888887764 45667777888999999999998 776543
Q ss_pred cCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 373 LAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 373 ~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
. ..+|++|+++|.+.+|++++++|++. ...+|++||+++++++.+++++|+.++.++++.
T Consensus 343 -~-~~~g~tD~~~~~~~~p~~~~~~G~~~-----~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 343 -E-QSPGGEDFALYQEKIPGFFVWMGTNG-----TEEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp -C-CBSSCCTHHHHHTTSCEEEEEEECCC-----SSCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred -c-cCCccchHHHHHHHCCeEEEEEcCCC-----CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2 68899999999888998777788743 356999999999999999999999999999874
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=2.2e-57 Score=460.21 Aligned_cols=371 Identities=28% Similarity=0.426 Sum_probs=296.9
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC------------------------------------
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------------------------------------ 101 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~------------------------------------ 101 (444)
..++++++.++++++|+.+++|.++++||+++|+++|++++...
T Consensus 12 ~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (445)
T 3io1_A 12 LAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPA 91 (445)
T ss_dssp THHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGG
T ss_pred HHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcccccccccccc
Confidence 66899999999999999999999999999999999999987531
Q ss_pred ---CCceEEEEe-CCCCCcEEEEEeccCccCCcCCCCCcccCc-------CCCccccCcchHHHHHHHHHHHHHHhcccc
Q 013395 102 ---AKTGVVATV-GSGSPPFVALRADMDALPIQELVEWEHKSK-------IDGKMHACGHDAHVAMLLGAAKILQEMRET 170 (444)
Q Consensus 102 ---~~~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~~w~~~p~-------~~g~i~grG~k~~~a~~l~a~~~l~~~~~~ 170 (444)
+++|+++++ +++++|+|+|.||||+||+++.++|+++|. .+|++||||+|++++++|+|+++|++.+..
T Consensus 92 ~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~~~ 171 (445)
T 3io1_A 92 FEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAAQ 171 (445)
T ss_dssp GTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTGGG
T ss_pred ccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCcCc
Confidence 568999999 444679999999999999988889988773 458999999999999999999999998888
Q ss_pred CCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCC-CCCCCC
Q 013395 171 LKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHA-AIPQHC 249 (444)
Q Consensus 171 ~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hs-s~p~~g 249 (444)
++++|.|+|+++||.+.|++.+++++.++++|+++++|+++..+.|.+....+... +..+++|+++|+++|+ +.|+.|
T Consensus 172 ~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~-a~~~~~i~v~Gk~~HaGs~P~~g 250 (445)
T 3io1_A 172 LNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFM-ATTKFDVQFSGVAAHAGGKPEDG 250 (445)
T ss_dssp CCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBC-EEEEEEEEEECCCSSTTCCGGGC
T ss_pred CCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCee-EEEEEEEEEEeecCCCCCCCcCC
Confidence 99999999999999778999999999888999999999876666777765443222 3468999999999999 689999
Q ss_pred CCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhh
Q 013395 250 IDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH 329 (444)
Q Consensus 250 ~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~ 329 (444)
+||+..+++++..|+.+. +.. ....+++++.++||.+.|+||++|++.+|+|..+.++.+++.++|+++++..+..+
T Consensus 251 ~nAi~~aa~~i~~l~~l~-~~~--~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~ 327 (445)
T 3io1_A 251 RNALLAAAQAALGLHAIP-PHS--AGASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAMY 327 (445)
T ss_dssp CCHHHHHHHHHHHHHTCC-CBT--TBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHH-hhc--CCCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999873 221 23478999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccccc-CCCCCcCcHHHHHHHHcC-----CcEEEeccCCCC
Q 013395 330 RCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL-APIFTGSEDFAFFLDEIP-----GSFLLLGMLNDS 403 (444)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~-~~~~~g~tD~~~~~~~~p-----~~~~~~G~~~~~ 403 (444)
++++++++. ..+|++.+|+++++.+++++++++|.+++.. ....+|++|+++|.+.+| ..++++|++.
T Consensus 328 g~~~~i~~~----~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~-- 401 (445)
T 3io1_A 328 EARYELRMM----GAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLASYMIFGTEL-- 401 (445)
T ss_dssp TCEEEEEEE----EEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC--
T ss_pred CCeEEEEEe----cCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceEEEEEeCCC--
Confidence 999888875 4667788899999999999999887664321 233589999999998876 4566788743
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhcC
Q 013395 404 VGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 404 pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~~ 441 (444)
....|++||+++++++..++++|+.++.+++.+++
T Consensus 402 ---~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~ 436 (445)
T 3io1_A 402 ---SAGHHNEKFDFDESVMAVAVETLARVALNFPWQRG 436 (445)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTCCSCC-
T ss_pred ---CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 24699999999999999999999999999988765
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.2e-52 Score=422.95 Aligned_cols=372 Identities=16% Similarity=0.161 Sum_probs=306.8
Q ss_pred hHHHHHHhhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceec---------------------cCC
Q 013395 44 SIKSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRW---------------------PVA 102 (444)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~---------------------~~~ 102 (444)
.+.+.+...++. ..+++++++++++++||++++|.++++||+++|+++|++++. .++
T Consensus 12 ~~~~~i~~~i~~--~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (433)
T 3pfo_A 12 AITQSLRAAVDR--NFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAG 89 (433)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGG
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCC
Confidence 455555555543 678999999999999999999999999999999999999864 245
Q ss_pred CceEEEEe-CCCCCcEEEEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCce
Q 013395 103 KTGVVATV-GSGSPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGT 174 (444)
Q Consensus 103 ~~n~~~~~-~~~~~~~ill~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~ 174 (444)
++|+++++ +++++|+|+|+|||||||+++.+.|.++| .++|++||||+ |++++++|+|+++|++.+..++++
T Consensus 90 ~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 90 SMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp CEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred CcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 78999999 44467999999999999998878898887 46899999996 899999999999999988888999
Q ss_pred EEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHH
Q 013395 175 VVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPI 253 (444)
Q Consensus 175 i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai 253 (444)
|.|+|+++||.| .|++.+++.+. ++|++++.+ +..+ .+. ...+|..+++|+++|+++|+|.|+.|+||+
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e--p~~~--~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi 239 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRGY--RADACLIPE--PTGH--TLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSAI 239 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC--CCSS--CEE----EEECEEEEEEEEEECCCCBGGGGGGSCCHH
T ss_pred EEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC--CCCC--ceE----EecceEEEEEEEEEcCCCccCCCCcCcCHH
Confidence 999999999987 59999888764 678888664 3222 221 223599999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc-----CCC-----CCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHH
Q 013395 254 LAVSSSVISLQNIVSRE-----IDP-----LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIK 323 (444)
Q Consensus 254 ~~~~~~l~~l~~~~~~~-----~~~-----~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 323 (444)
..+++++..|+++..+. .++ ....+++++.|+||.+.|+||++|++.+|+|+.++++.+++.++|+++++
T Consensus 240 ~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~ 319 (433)
T 3pfo_A 240 LSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLA 319 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 99999999998875321 122 23458999999999999999999999999999999999999999999998
Q ss_pred HHHHhhC----CceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH--cCCcEE
Q 013395 324 GQAAVHR----CSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE--IPGSFL 395 (444)
Q Consensus 324 ~~a~~~~----~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~ 395 (444)
+.+..++ +++++++.. ..+|++ +.|+++++.+.+++++.+|.++.. ...+|++|+++|.+. +|++
T Consensus 320 ~~~~~~~~~~~~~~~v~~~~---~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~~--~~~~g~~D~~~~~~~~giP~v-- 392 (433)
T 3pfo_A 320 DAQATDSFLSENPAELVWSG---FQADPAVCEPGGVAEDVLTAAHKAAFNAPLDA--RLSTAVNDTRYYSVDYGIPAL-- 392 (433)
T ss_dssp HHHTTCHHHHHSCCEEEEEE---EEECCEECCTTCHHHHHHHHHHHHHHSSCCCE--EEESSCCTHHHHHHTTCCCEE--
T ss_pred HHhhhCcccccCCeEEEEec---ccCCcccCCCCCHHHHHHHHHHHHHhCCCCce--eeeeeeccHHHHHhhCCCCEE--
Confidence 8776542 445666531 123333 357789999999999988987532 467899999999873 8865
Q ss_pred EeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 396 LLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 396 ~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
.+|++. ..+|++||+++++++..++++|+.++.++|+.+
T Consensus 393 ~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~~ 431 (433)
T 3pfo_A 393 CYGPYG------QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR 431 (433)
T ss_dssp ECCCCE------ECTTSTTCEEEHHHHHHHHHHHHHHHHHHHCEE
T ss_pred EECCCC------ccCCCCCceEEHHHHHHHHHHHHHHHHHHhccC
Confidence 367652 569999999999999999999999999998754
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-51 Score=407.17 Aligned_cols=359 Identities=23% Similarity=0.302 Sum_probs=306.4
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCC--CceEEEEe-CCCCCcEEEEEec
Q 013395 47 SRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVA--KTGVVATV-GSGSPPFVALRAD 123 (444)
Q Consensus 47 ~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~--~~n~~~~~-~~~~~~~ill~~H 123 (444)
+.+.+.++ +..+++++++++++++|+++++|.++++||+++|+++|++++.... ++|+++++ +++++|+|+|.+|
T Consensus 5 ~~i~~~~~--~~~~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ah 82 (394)
T 3ram_A 5 QQILDYIE--TNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAE 82 (394)
T ss_dssp HHHHHHHH--HTHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEEC
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEEe
Confidence 33444443 3678999999999999999999999999999999999999875432 56999999 4446799999999
Q ss_pred cCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChh-hhhhcccccc
Q 013395 124 MDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAK-DMIQEGVLEN 200 (444)
Q Consensus 124 ~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~-~~~~~~~~~~ 200 (444)
||+|| |++||||+|...+++|.|+++|++.+..++++|.|+|+++||.| .|++ .+++.+++++
T Consensus 83 ~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~~ 148 (394)
T 3ram_A 83 YDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQ 148 (394)
T ss_dssp CCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGGG
T ss_pred cccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCccc
Confidence 99999 67799999988899999999999887789999999999999987 4999 8999988888
Q ss_pred cceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEE
Q 013395 201 VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVV 279 (444)
Q Consensus 201 ~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~ 279 (444)
+|+++++|+++.. ..+...+|..+++|+++|+++|+| .|+.|+||+..+++++..|+.+.... + ...++
T Consensus 149 ~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~~ 218 (394)
T 3ram_A 149 IDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQRV 218 (394)
T ss_dssp CSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCEE
T ss_pred CCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCee
Confidence 9999999876542 123345699999999999999999 89999999999999999999874322 1 23567
Q ss_pred EEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHH
Q 013395 280 SVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVR 359 (444)
Q Consensus 280 ~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 359 (444)
+++.++||.+.|+||++|++.+|+|..+.++.+++.++|++++++.+..+++++++++. ...+|++.+|+++++.++
T Consensus 219 ~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~---~~~~~~~~~d~~l~~~~~ 295 (394)
T 3ram_A 219 HGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI---QNGVNEFIKTPKLDDLFA 295 (394)
T ss_dssp EEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES---SCCBCCCCCCHHHHHHHH
T ss_pred EEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe---cCCCCCccCCHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999988872 167888888999999999
Q ss_pred HHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCC-------CCCCchHHHHHHHHHH
Q 013395 360 RVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFT-------IDEHVLPIGAVIHAAF 432 (444)
Q Consensus 360 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~-------i~i~~~~~~~~~~~~~ 432 (444)
+++++ +| .++......+|++|+++|.+.+|++++++|.++.+ ...|+| |+ ++.+.+..++++++.+
T Consensus 296 ~a~~~-~G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~~----~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~~ 368 (394)
T 3ram_A 296 KYAEE-VG-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRN----LVGHTH-RFREAAASVHGDEALIKGAKIMALM 368 (394)
T ss_dssp HHHHH-TT-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSCTT----CCTTSH-HHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-hC-cccccCCCCcccccHHHHHHHhchheEEeeecCCC----CCCCCH-HHHhccCCCccHHHHHHHHHHHHHH
Confidence 99998 48 44322457889999999998899988888875422 468999 76 4899999999999999
Q ss_pred HHHHhhhcC
Q 013395 433 AHSYLVNSG 441 (444)
Q Consensus 433 l~~~~~~~~ 441 (444)
+.+++.+++
T Consensus 369 ~~~~l~~~~ 377 (394)
T 3ram_A 369 GLELITNQD 377 (394)
T ss_dssp HHHHHHCHH
T ss_pred HHHHhcCHH
Confidence 999988654
No 6
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.7e-50 Score=403.97 Aligned_cols=360 Identities=18% Similarity=0.267 Sum_probs=292.7
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
+++++++++++++||.+++|.++++||+++|+++|++++.. +..+|++++++. ++|+|+|++||||||+++.++|++
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCCC
Confidence 56788999999999999999999999999999999998753 357899999953 468999999999999988778988
Q ss_pred cC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChhhhhhccccc--ccceeEE
Q 013395 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVLE--NVEAIFG 206 (444)
Q Consensus 138 ~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~~--~~d~~~~ 206 (444)
+| ++||++||||+ |++++++|.|++.|++.+..++++|.|+|+++||.+ .|++.+++..... ++|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 77 46899999997 799999999999999887788999999999999986 5998887654332 4677776
Q ss_pred ecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCcEEEEEEee
Q 013395 207 LHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDPLDSQVVSVAMIN 285 (444)
Q Consensus 207 ~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-~~~~~~~t~~v~~i~ 285 (444)
.++.+..+.+.+. . ...+|..+++|+++|+++|++.|+.|.||+..+++++..|+....+. .....+.+++++.++
T Consensus 165 ~e~~~~~~~g~~i-~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDMI-K--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSEE-E--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCcee-E--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 6543322223211 1 12358999999999999999999999999999999999998864221 223455799999999
Q ss_pred cCc-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHH
Q 013395 286 GGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAE 364 (444)
Q Consensus 286 gG~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 364 (444)
||. +.|+||++|++.+|+|+.+.++.+++.++|+++++. +++++++++.. ...|...+++++++.+.+++++
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~~~~~~~l~~~~~~~~~~ 314 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSC---SGQPFLTQAGKLTDVARAAIAE 314 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE---EECCEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEec---CCCcccCCCcHHHHHHHHHHHH
Confidence 996 899999999999999999999999999999998764 45666666532 1223234577899999999999
Q ss_pred HhCCcccccCCCCCcCcHHHHHHH-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 365 ILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 365 ~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
.+|.++.. ...+|++|++++.. .+|+ +.+|+.. ..+|++||+++++++.+++++|+.++.+++..+
T Consensus 315 ~~g~~~~~--~~~~g~~D~~~~~~~~~P~--v~~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~ 381 (393)
T 1vgy_A 315 TCGIEAEL--STTGGTSDGRFIKAMAQEL--IELGPSN------ATIHQINENVRLNDIPKLSAVYEGILVRLLAGN 381 (393)
T ss_dssp HHSSCCEE--ECCSCCCTHHHHGGGEEEE--EECCSBC------TTTTSTTCEEETTHHHHHHHHHHHHHHHHC---
T ss_pred HcCCCceE--ecCCccchHHHHHhCCCCE--EEECCCC------CCCCCCCCceeHHHHHHHHHHHHHHHHHHhccC
Confidence 88987643 56789999999988 5884 3467743 459999999999999999999999999998653
No 7
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=8e-50 Score=396.78 Aligned_cols=360 Identities=18% Similarity=0.236 Sum_probs=287.3
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCc
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~ 136 (444)
.+++++++++++++||++++|.++++||+++|+++|++++.. ++.+|+++++|+ ++|+|+|+||||+||.++.++|+
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g~-~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEES-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeCC-CCCEEEEeccccccCCCCcccCC
Confidence 367889999999999999999999999999999999998743 357899999853 46899999999999998877899
Q ss_pred ccCc----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChhhhhhcccc--cccceeE
Q 013395 137 HKSK----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVL--ENVEAIF 205 (444)
Q Consensus 137 ~~p~----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~--~~~d~~~ 205 (444)
++|. +||++||||+ |++++++|.|++.|++.+..++++|.|+|+++||.| .|++.+++.... ..+|.++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 8873 6899999996 799999999999999888788999999999999987 499988765332 2478887
Q ss_pred EecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCcEEEEEEe
Q 013395 206 GLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDPLDSQVVSVAMI 284 (444)
Q Consensus 206 ~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-~~~~~~~t~~v~~i 284 (444)
+.++....+.+... . ...+|..+++|+++|+++|+|.|+.|.||+..+++++.+|++...+. ......++++++.+
T Consensus 161 ~~e~~~~~~~g~~i-~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDVV-K--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSEE-E--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCceE-E--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 76544333333211 1 12248899999999999999999999999999999999998864222 22245689999999
Q ss_pred ecCc-ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHH
Q 013395 285 NGGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTA 363 (444)
Q Consensus 285 ~gG~-~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 363 (444)
+||. +.|+||++|++.+|+|+.+..+.+++.+++++++++ +++++++++.. ...|....++++++.+.++++
T Consensus 238 ~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~~---~~~p~~~~~~~l~~~l~~a~~ 310 (377)
T 3isz_A 238 HAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWNL---SGKPFLTKPGKLLDSITSAIE 310 (377)
T ss_dssp EECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE---CCCCEECCTTHHHHHHHHHHH
T ss_pred ECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEEe---cCCCCcCCCCHHHHHHHHHHH
Confidence 9997 899999999999999999999999999999988764 67777777642 223333457789999999999
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
+.+|.++.. ...+|++|++++.+. +|++ .+|+.. ..+|++||+++++++.+++++|+.++.++|.+
T Consensus 311 ~~~g~~~~~--~~~~g~tDa~~~~~~g~~~v--~~Gp~~------~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~~ 377 (377)
T 3isz_A 311 ETIGITPKA--ETGGGTSDGRFIALMGAEVV--EFGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLDS 377 (377)
T ss_dssp HHHSCCCEE--EECSSCCSHHHHHTTTCEEE--ECCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHhCCCCee--eccCcccHHHHHHHcCCCEE--EECCCC------CcccCCCCcEEHHHHHHHHHHHHHHHHHHhhC
Confidence 988987643 456889999988875 4433 367653 45999999999999999999999999998853
No 8
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=408.41 Aligned_cols=365 Identities=16% Similarity=0.186 Sum_probs=290.6
Q ss_pred hHHHHHHHHHHHhcCCCC--Ccc------hHHHHHHHHHHHHHcCCceeccC--------C-----CceEEEEeCCC-CC
Q 013395 58 TVNWMKKMRRQIHENPEL--AYE------EFETSELIRRELDQLGIAYRWPV--------A-----KTGVVATVGSG-SP 115 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~--s~~------e~~~~~~i~~~l~~~g~~~~~~~--------~-----~~n~~~~~~~~-~~ 115 (444)
..+++++++++++++||+ +++ |.++++||+++|+++|++++... + .+|++++++++ ++
T Consensus 23 ~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~~~~ 102 (485)
T 3dlj_A 23 HQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDPTK 102 (485)
T ss_dssp THHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCCTTS
T ss_pred hHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCCCCC
Confidence 678999999999999999 877 57899999999999999987542 2 35899999544 56
Q ss_pred cEEEEEeccCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-C
Q 013395 116 PFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T 187 (444)
Q Consensus 116 ~~ill~~H~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~ 187 (444)
|+|+|+|||||||+++.+.|+.+| +++|++||||+ |++++++|+|+++|++.+..++++|.|+|+++||.| .
T Consensus 103 ~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~ 182 (485)
T 3dlj_A 103 GTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSV 182 (485)
T ss_dssp CEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTT
T ss_pred CEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEEEEEEcccccCCc
Confidence 899999999999998777898877 36899999996 799999999999999998889999999999999998 5
Q ss_pred Chhhhhhccc---ccccceeEEecccC---CCCCceeeeccCcccccceeEEEEEEecCC--CCCC-CCCCCCHHHHHHH
Q 013395 188 GAKDMIQEGV---LENVEAIFGLHLVH---KYPTGVVASRPGDFLAGCGSFKAKISGKGG--HAAI-PQHCIDPILAVSS 258 (444)
Q Consensus 188 G~~~~~~~~~---~~~~d~~~~~~~~~---~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~--Hss~-p~~g~nai~~~~~ 258 (444)
|++.+++++. ++++|++++.|+.. +.+...++ .+|..+++|+++|+++ |||. +...++|+..+..
T Consensus 183 g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g------~~g~~~~~i~v~G~~~~~H~~~~g~~a~~~~~~l~~ 256 (485)
T 3dlj_A 183 ALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYG------TRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVA 256 (485)
T ss_dssp THHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEEEE------ECEEEEEEEEEESCSSCEETTTSTTSSCCHHHHHHH
T ss_pred cHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEEEe------ccceEEEEEEEEECCCCCcCCCCCccccCHHHHHHH
Confidence 9999998753 45789999887432 12222233 3599999999999999 9997 4444455555544
Q ss_pred HHHHHHHhhccc--------CCCC----------------------------------------CCcEEEEEEeecC---
Q 013395 259 SVISLQNIVSRE--------IDPL----------------------------------------DSQVVSVAMINGG--- 287 (444)
Q Consensus 259 ~l~~l~~~~~~~--------~~~~----------------------------------------~~~t~~v~~i~gG--- 287 (444)
++..|.+...+. ..+. ..++++|+.|+||
T Consensus 257 ~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~~g 336 (485)
T 3dlj_A 257 LLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAFDE 336 (485)
T ss_dssp HHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEEEEEESSCCS
T ss_pred HHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEEEEEecCCcC
Confidence 444443321110 1110 1578999999999
Q ss_pred -cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhC--CceeEEeccCCCCCCCCccC--CHHHHHHHHHHH
Q 013395 288 -SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHR--CSAEVDFSGREHPTLPPTMN--DVRIYQHVRRVT 362 (444)
Q Consensus 288 -~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~ 362 (444)
.+.|+||++|++.+++|..+.++.+++.++|+++++..+..+| +++++++. ..+|++.. ++++++.+.+++
T Consensus 337 p~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~~----~~~pp~~~~~d~~~~~~~~~a~ 412 (485)
T 3dlj_A 337 PGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMT----LGLHPWIANIDDTQYLAAKRAI 412 (485)
T ss_dssp SSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEEE----EEECCEECCTTSHHHHHHHHHH
T ss_pred CCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEEc----CCCCceeCCCCCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999998888 46777764 34566544 447999999999
Q ss_pred HHHhCCcccccCCCCCcCcHH-HHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 363 AEILGEENVKLAPIFTGSEDF-AFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 363 ~~~~g~~~~~~~~~~~g~tD~-~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
++++|.+++. ...+|+.|+ .+|.+.+|..++++|++..+ ...|+|||+++++++..++++++.++.++..
T Consensus 413 ~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~----~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~ 483 (485)
T 3dlj_A 413 RTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGAVD----DGEHSQNEKINRWNYIEGTKLFAAFFLEMAQ 483 (485)
T ss_dssp HHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCCCC----CCCcCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 9988987653 346788996 47777778777777876432 5699999999999999999999999988754
No 9
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=7.4e-50 Score=399.27 Aligned_cols=356 Identities=19% Similarity=0.219 Sum_probs=290.5
Q ss_pred hHHHHHHHHHHHhcCCCCCcch---HHHHHHHHHHHHHcCCceeccC-----CCceEEEEeCCCCCcEEEEEeccCccCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWPV-----AKTGVVATVGSGSPPFVALRADMDALPI 129 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e---~~~~~~i~~~l~~~g~~~~~~~-----~~~n~~~~~~~~~~~~ill~~H~D~vp~ 129 (444)
..+++++++++++++||++++| .++++||+++|+++|++++..+ ..+|++++++++.+|+|+|+|||||||.
T Consensus 17 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~i~l~aH~D~vp~ 96 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNLLLMSHMDTVYL 96 (393)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCCEEEEEECCBSCC
T ss_pred hHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCceEEEEEecCcCCC
Confidence 4578899999999999999876 6899999999999999987543 2469999994333589999999999986
Q ss_pred cC-CCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhccccccccee
Q 013395 130 QE-LVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAI 204 (444)
Q Consensus 130 ~~-~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~ 204 (444)
.. ...||+. .++|++||||+ |++++++|+|+++|++.+..++++|.|+|+++||.| .|++.+++.+. .++|++
T Consensus 97 ~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~-~~~d~~ 174 (393)
T 1cg2_A 97 KGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA-KLADYV 174 (393)
T ss_dssp TTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHHHHHHH-HHCSEE
T ss_pred CCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHHHHHHh-hcCCEE
Confidence 43 3446665 57899999994 799999999999999988878889999999999998 49999887632 467888
Q ss_pred EEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEE
Q 013395 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAM 283 (444)
Q Consensus 205 ~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~ 283 (444)
+++++... +.+.+. ...+|..+++|+++|+++||| .|+.|.||+..+++++..|+.+.. +....+++++.
T Consensus 175 i~~e~~~~-~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~----~~~~~~~~v~~ 245 (393)
T 1cg2_A 175 LSFEPTSA-GDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD----KAKNLRFNWTI 245 (393)
T ss_dssp EECCCEET-TSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB----TTTTEEEEEEE
T ss_pred EEeCCCCC-CCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC----cccCceEEEEE
Confidence 88764320 233332 123589999999999999997 699999999999999999988742 33457999999
Q ss_pred eecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccC---CHHHHHHHHH
Q 013395 284 INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMN---DVRIYQHVRR 360 (444)
Q Consensus 284 i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~ 360 (444)
++||.+.|+||++|++.+|+|+.+.++.+++.++|++++++ +..+++++++++. ..+|++.. ++++++.+++
T Consensus 246 i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~ 320 (393)
T 1cg2_A 246 AKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIVT----RGRPAFNAGEGGKKLVDKAVA 320 (393)
T ss_dssp EEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEEE----ECSCCEECHHHHHHHHHHHHH
T ss_pred EeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEec----cccCCccCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999876 3346777777754 34555544 4679999999
Q ss_pred HHHHHhCCcccccCCC-CCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCC-CCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 361 VTAEILGEENVKLAPI-FTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHS-PYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 361 ~~~~~~g~~~~~~~~~-~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~-~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
++++ +|.++. +.. .+|++|+++|... +|+++ .+|+.. ..+|+ +||+++++++.+++++|+.++.+++
T Consensus 321 ~~~~-~g~~~~--~~~~~~g~tD~~~~~~~giP~~~-~~G~~~------~~~H~~~~E~i~~~~l~~~~~~~~~~~~~l~ 390 (393)
T 1cg2_A 321 YYKE-AGGTLG--VEERTGGGTDAAYAALSGKPVIE-SLGLPG------FGYHSDKAEYVDISAIPRRLYMAARLIMDLG 390 (393)
T ss_dssp HHHH-TTCCCE--EESCBSCCCTHHHHGGGSCCEEC-CCSCEE------ECTTSSSCCEEEGGGHHHHHHHHHHHHHHHH
T ss_pred HHHH-hCCCCc--cccCCCcccHHHHHHhCCCCEEE-eCCCCC------CCccCCCcceEEehhHHHHHHHHHHHHHHHh
Confidence 9986 487643 245 7899999999887 89753 456532 45899 9999999999999999999999987
Q ss_pred hh
Q 013395 438 VN 439 (444)
Q Consensus 438 ~~ 439 (444)
+.
T Consensus 391 ~~ 392 (393)
T 1cg2_A 391 AG 392 (393)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 10
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-49 Score=394.83 Aligned_cols=351 Identities=17% Similarity=0.223 Sum_probs=289.1
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CCceEEEEe-CC---CCCcEEEEEeccCc
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GS---GSPPFVALRADMDA 126 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~~n~~~~~-~~---~~~~~ill~~H~D~ 126 (444)
..+++++++++++++|+++++|.++++||+++|+++|++++... +.+|+++++ ++ .++|+|+|+||||+
T Consensus 22 ~~~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~ 101 (396)
T 3rza_A 22 NEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDT 101 (396)
T ss_dssp CHHHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCB
T ss_pred cHHHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCc
Confidence 56889999999999999999999999999999999999987643 368999999 54 35699999999999
Q ss_pred cCCcCCCCCcccCcCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccc
Q 013395 127 LPIQELVEWEHKSKIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL 198 (444)
Q Consensus 127 vp~~~~~~w~~~p~~~g~i~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~ 198 (444)
||+++ .|+....++|++||||+ |++++++|.|+++|++.+. ++++|.|+|+++||.|+ |++.+.+++.
T Consensus 102 vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~- 177 (396)
T 3rza_A 102 VVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSELL- 177 (396)
T ss_dssp CSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHHHHHCCGGGC-
T ss_pred cCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHhHhhhchhhc-
Confidence 99864 46322233499999996 5999999999999998764 68999999999999984 8888865532
Q ss_pred cccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcE
Q 013395 199 ENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQV 278 (444)
Q Consensus 199 ~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t 278 (444)
+.|+.+.. ++..+.+.+... .+|..+++|+++|+++|+|.|+.|+||+..+++++..|+... .+ ...+
T Consensus 178 -~~~~~~~~--~~~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~---~~--~~~~ 245 (396)
T 3rza_A 178 -DADFGYAI--DASADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ---VD--EITT 245 (396)
T ss_dssp -CCSEEEEE--EESSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEE---EE--TTEE
T ss_pred -ccceEEEE--ecCCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCC---CC--CCce
Confidence 33555544 444444544332 248899999999999999999999999999999999987531 11 2468
Q ss_pred EEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHHHHH
Q 013395 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVRIYQ 356 (444)
Q Consensus 279 ~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~ 356 (444)
++++.++||.+.|+||++|++.+|+|+.+.++.+++.++|++++++.+..+++++++++. ..+|++ +.|+++++
T Consensus 246 ~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~~----~~~p~~~~~~d~~l~~ 321 (396)
T 3rza_A 246 ANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVE----QSYPGFKINDNEAVVK 321 (396)
T ss_dssp EEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE----EEECCEECCTTSHHHH
T ss_pred eeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEEE----eccCCcccCCCcHHHH
Confidence 999999999999999999999999999999999999999999999998889998888865 445555 45788999
Q ss_pred HHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013395 357 HVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 435 (444)
Q Consensus 357 ~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~ 435 (444)
.+.+++++. |.++. ....+|++|+++|.+. +|+++ +|++. ..+|++||+++++++..++++|+.++.+
T Consensus 322 ~~~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~giP~~~--~g~g~------~~~H~~~E~v~~~~l~~~~~~~~~~~~~ 390 (396)
T 3rza_A 322 IAQESARNL-GLSAN--TIISGGGSDGSIINTFGIPSVI--LGVGY------EKIHTTNERMPIKSLNLLASQVLEIIKI 390 (396)
T ss_dssp HHHHHHHHT-TCCCC--EEECSSCCHHHHHGGGTCCEEE--EECCC------BSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCce--ecccceeccHHHHhhCCCcEEE--ECCCC------CCCCCCcceeEHHHHHHHHHHHHHHHHH
Confidence 999999985 86643 3467899999999876 99765 45532 3599999999999999999999999999
Q ss_pred Hhhh
Q 013395 436 YLVN 439 (444)
Q Consensus 436 ~~~~ 439 (444)
+..+
T Consensus 391 l~~~ 394 (396)
T 3rza_A 391 VARQ 394 (396)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
No 11
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=1.5e-48 Score=387.11 Aligned_cols=346 Identities=18% Similarity=0.221 Sum_probs=287.4
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CCceEEEEe-CC-CCCcEEEEEeccCccCC
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GS-GSPPFVALRADMDALPI 129 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~~n~~~~~-~~-~~~~~ill~~H~D~vp~ 129 (444)
.+++++++++++++|+++++|.++++||+++|+++|++++... +++|+++++ ++ .++|+|+|.||||+||+
T Consensus 5 ~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~ 84 (373)
T 3gb0_A 5 QERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVP 84 (373)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCC
Confidence 4778899999999999999999999999999999999987653 258999999 54 35799999999999998
Q ss_pred cCCCCCcccCcCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccccc
Q 013395 130 QELVEWEHKSKIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENV 201 (444)
Q Consensus 130 ~~~~~w~~~p~~~g~i~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~ 201 (444)
++ .|+ +..++|++||||+ |++++++|.+++.|++.+. ++++|.|+|+++||.|+ |++.+..++. +.
T Consensus 85 ~~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 158 (373)
T 3gb0_A 85 GN--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TA 158 (373)
T ss_dssp CS--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CC
T ss_pred CC--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CC
Confidence 65 463 2367899999995 5899999999999998775 78999999999999984 8888854422 34
Q ss_pred ceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEE
Q 013395 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVS 280 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~ 280 (444)
|+.+.. ++..+.+.+... .+|..+++|+++|+++|++ .|+.|+||+..+++++..|+.. .. ....+++
T Consensus 159 ~~~~~~--~~~~~~g~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~--~~~~~~~ 227 (373)
T 3gb0_A 159 KYGYAL--DSDGKVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RI--DSETTAN 227 (373)
T ss_dssp SEEEEE--EECSCTTEEEEE----ECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EE--ETTEEEE
T ss_pred CEEEEE--cCCCCCCeEEEc----CCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cC--CCccccc
Confidence 554444 444444554432 2488999999999999999 7999999999999999888652 11 1246899
Q ss_pred EEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHHHHHHH
Q 013395 281 VAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVRIYQHV 358 (444)
Q Consensus 281 v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~ 358 (444)
++.++||.+.|+||++|++.+|+|+.+.++.+++.++|++++++.+..+++++++++. ..+|++ +.|+++++.+
T Consensus 228 vg~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~~----~~~~~~~~~~~~~l~~~~ 303 (373)
T 3gb0_A 228 IGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVN----VMYPGFKFADGDHVVEVA 303 (373)
T ss_dssp EEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE----EEECCEECCTTCHHHHHH
T ss_pred eeEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe----cccCCcccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999998899998888764 345555 4578899999
Q ss_pred HHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 359 RRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 359 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
.+++++. |.++. ....+|++|+++|.+. +|+++ +|++. ..+|++||+++++++..++++|+.++.++
T Consensus 304 ~~~~~~~-g~~~~--~~~~~g~~D~~~~~~~gip~~~--~g~~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 304 KRAAEKI-GRTPS--LHQSGGGSDANVIAGHGIPTVN--LAVGY------EEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHHT-TCCCE--EEECSSCCHHHHHHHTTCCEEE--EECCC------BSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCCce--EecccCcchHHHHHhCCCCEEE--ecCCC------CcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 9999984 87653 3467899999999886 99765 45532 35999999999999999999999999988
No 12
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.9e-48 Score=395.35 Aligned_cols=363 Identities=12% Similarity=0.054 Sum_probs=285.2
Q ss_pred HHHHHHHHHHhcCCCCCcc----------hHHHHHHHHHHHHHcCCc---eec--cCC-CceEEEEeCCCCCcEEEEEec
Q 013395 60 NWMKKMRRQIHENPELAYE----------EFETSELIRRELDQLGIA---YRW--PVA-KTGVVATVGSGSPPFVALRAD 123 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~----------e~~~~~~i~~~l~~~g~~---~~~--~~~-~~n~~~~~~~~~~~~ill~~H 123 (444)
++++++++++++|||.+++ |.++++|++++|+++|++ ++. ..+ ++||+++++++++|+|+|+||
T Consensus 18 ~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~~~~~i~l~~H 97 (472)
T 3pfe_A 18 EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQIDDTVLLYGH 97 (472)
T ss_dssp HTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCSEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCCCCCeEEEEcc
Confidence 6789999999999999865 889999999999999985 432 223 689999994345689999999
Q ss_pred cCccCCcCCCCCc--ccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhh
Q 013395 124 MDALPIQELVEWE--HKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMI 193 (444)
Q Consensus 124 ~D~vp~~~~~~w~--~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~ 193 (444)
|||||+. +.|+ ++| +++|++||||+ |++++++|+|+++|++.+..++ +|.|+|+++||.| .|++.++
T Consensus 98 ~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~EE~g~~g~~~~~ 174 (472)
T 3pfe_A 98 LDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEACEESGSYDLPFYI 174 (472)
T ss_dssp CCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESCGGGTSTTHHHHH
T ss_pred ccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeCCCCCChhHHHHH
Confidence 9999986 4787 665 46899999996 7999999999999999887766 9999999999998 4999999
Q ss_pred hcc--cccccceeEEecccCCCCCceeeeccCcccccceeEE--EEEEecCCCCCCCCCC-CCHHHHHHHHHHHHHHhh-
Q 013395 194 QEG--VLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFK--AKISGKGGHAAIPQHC-IDPILAVSSSVISLQNIV- 267 (444)
Q Consensus 194 ~~~--~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~--i~v~G~~~Hss~p~~g-~nai~~~~~~l~~l~~~~- 267 (444)
+++ .++++|++++.+.....+ +..... ...+|..+++ |+++|+++|||.|+.+ .|||..+++++.+|++..
T Consensus 175 ~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~ 251 (472)
T 3pfe_A 175 ELLKERIGKPSLVICLDSGAGNY-EQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENT 251 (472)
T ss_dssp HHHHHHHCCCSEEEEECCBCSCS-SSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTT
T ss_pred HHhHhhccCCCEEEEeCCCcCCC-CCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCC
Confidence 875 334789999887432211 111111 1124777766 5558999999987755 599999999999998863
Q ss_pred ccc--------C-----------------------------CCCC------------CcEEEEEEeecC----ccccccc
Q 013395 268 SRE--------I-----------------------------DPLD------------SQVVSVAMINGG----SSYNMIP 294 (444)
Q Consensus 268 ~~~--------~-----------------------------~~~~------------~~t~~v~~i~gG----~~~nviP 294 (444)
.+. . ++.. .+|++++.|+|| .+.|+||
T Consensus 252 ~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~~g~a~NvIP 331 (472)
T 3pfe_A 252 GEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIADAGNVMR 331 (472)
T ss_dssp CCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCCTTTCCSCBC
T ss_pred CCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcCCCCCCCEeC
Confidence 100 0 0110 479999999997 6899999
Q ss_pred CcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCC-CCCCcc---CCHHHHHHHHHHHHHHhCCcc
Q 013395 295 DSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP-TLPPTM---NDVRIYQHVRRVTAEILGEEN 370 (444)
Q Consensus 295 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~---~d~~l~~~~~~~~~~~~g~~~ 370 (444)
++|++.+|+|+.+.++.+.+.++|+++++..+ .++++++++.. . .+|++. +++.+++.+++++++++|.++
T Consensus 332 ~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~~----~~~~pp~~~~~n~~~l~~~~~~a~~~~~G~~~ 406 (472)
T 3pfe_A 332 PVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKIQ----NGGSKGWNAPLLSDWLAKAASEASMTYYDKPA 406 (472)
T ss_dssp SEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEEC----SCCBCCEECCCCCHHHHHHHHHHHHHHHSSCC
T ss_pred CccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEec----CCCCCcccCCCCChHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999998765 67778777753 3 455554 345588999999999889876
Q ss_pred cccCCCCCcCcH-H-HHHHHHcCCc-EEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 371 VKLAPIFTGSED-F-AFFLDEIPGS-FLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 371 ~~~~~~~~g~tD-~-~~~~~~~p~~-~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
+. . ..|++| + ++|.+.+|.+ ++++|++..+ ..+|+|||+++++++..++++|+.++.++.+++
T Consensus 407 ~~--~-~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~----~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~~~ 472 (472)
T 3pfe_A 407 AY--M-GEGGTIPFMSMLGEQFPKAQFMITGVLGPH----SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQKK 472 (472)
T ss_dssp EE--E-EESSCCHHHHHHHHHCTTCEEEEECCBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ee--c-cCCCchhhHHHHHHHcCCCCEEEecCCCCC----CCCcCCCcceeHHHHHHHHHHHHHHHHHHhhcC
Confidence 43 2 345555 4 6677778876 7788876432 569999999999999999999999999887653
No 13
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=5.7e-48 Score=395.47 Aligned_cols=365 Identities=16% Similarity=0.118 Sum_probs=292.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcch------HHHHHHHHHHHHHcCCceeccC--------CC-----ceEEEEeCCC-CCcE
Q 013395 58 TVNWMKKMRRQIHENPELAYEE------FETSELIRRELDQLGIAYRWPV--------AK-----TGVVATVGSG-SPPF 117 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e------~~~~~~i~~~l~~~g~~~~~~~--------~~-----~n~~~~~~~~-~~~~ 117 (444)
..+++++++++++++|+.+++| .++++||+++|+++|++++... ++ +||+++++++ ++|+
T Consensus 18 ~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~ 97 (479)
T 2zog_A 18 NQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKT 97 (479)
T ss_dssp THHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCTTSCE
T ss_pred hHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCCCCCe
Confidence 4678999999999999999876 7999999999999999987542 23 8999999544 4689
Q ss_pred EEEEeccCccCCcCCCCCcccCc----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CCh
Q 013395 118 VALRADMDALPIQELVEWEHKSK----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGA 189 (444)
Q Consensus 118 ill~~H~D~vp~~~~~~w~~~p~----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~ 189 (444)
|+|+|||||||+++.+.|+++|. +||++||||+ |++++++|+|+++|++.+.+++++|.|+|+++||.| .|+
T Consensus 98 i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~Ga 177 (479)
T 2zog_A 98 VCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGL 177 (479)
T ss_dssp EEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTCTTH
T ss_pred EEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEecccccCCccH
Confidence 99999999999987668988874 5899999994 799999999999999988889999999999999988 499
Q ss_pred hhhhhcc---cccccceeEEecccCC-CCCceeeeccCcccccceeEEEEEEecC--CCCCCCCCCCCHHHHHHHHHHHH
Q 013395 190 KDMIQEG---VLENVEAIFGLHLVHK-YPTGVVASRPGDFLAGCGSFKAKISGKG--GHAAIPQHCIDPILAVSSSVISL 263 (444)
Q Consensus 190 ~~~~~~~---~~~~~d~~~~~~~~~~-~~~g~v~~~~g~~~~G~~~~~i~v~G~~--~Hss~p~~g~nai~~~~~~l~~l 263 (444)
+.+++++ +++++|++++.++... ...+.+. ...+|..+++|+++|++ +|||.+ |.||+..+++++..|
T Consensus 178 ~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~ai~~~~~~i~~l 251 (479)
T 2zog_A 178 DELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGSVHEAMTDLISLM 251 (479)
T ss_dssp HHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTTSCCHHHHHHHHH
T ss_pred HHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCCccCHHHHHHHHH
Confidence 9998875 3446888888764321 1122222 23459999999999998 999985 689999999998888
Q ss_pred HHhhcccC---------------------------C---------C-----------C----CCcEEEEEEeecC----c
Q 013395 264 QNIVSREI---------------------------D---------P-----------L----DSQVVSVAMINGG----S 288 (444)
Q Consensus 264 ~~~~~~~~---------------------------~---------~-----------~----~~~t~~v~~i~gG----~ 288 (444)
+.+..+.. + . + ...+++++.|+|| .
T Consensus 252 ~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~~g~~ 331 (479)
T 2zog_A 252 GCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSG 331 (479)
T ss_dssp TTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSCCSSS
T ss_pred HhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCCcCCC
Confidence 76543210 0 0 0 1468999999998 8
Q ss_pred ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhh--CCceeEEeccCCCCCCCC--ccCCHHHHHHHHHHHHH
Q 013395 289 SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH--RCSAEVDFSGREHPTLPP--TMNDVRIYQHVRRVTAE 364 (444)
Q Consensus 289 ~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~--~~~~~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~ 364 (444)
+.|+||++|++.+|+|+.|+++.+++.++|+++++..+..+ +..+++++. ..+|+ .+.|+++++.+.+++++
T Consensus 332 ~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~d~~~~~~~~~a~~~ 407 (479)
T 2zog_A 332 AKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMG----HGGKPWVSDFNHPHYQAGRRALKT 407 (479)
T ss_dssp CCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEE----EEECCEECCTTSHHHHHHHHHHHH
T ss_pred CccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEec----CCCCceecCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887665 456666653 23444 34578899999999999
Q ss_pred HhCCcccccCCCCCcCcHH-HHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 365 ILGEENVKLAPIFTGSEDF-AFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 365 ~~g~~~~~~~~~~~g~tD~-~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
++|.++.. ...+|++|+ ++|.+. +|++++++|+. + ..+|++||+++++++.+++++|+.++.+++..+
T Consensus 408 ~~g~~~~~--~~~~gs~d~~~~~~~~~~~p~~~~g~g~~-----~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~ 478 (479)
T 2zog_A 408 VFGVEPDL--TREGGSIPVTLTFQEATGKNVMLLPVGSA-----D-DGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLK 478 (479)
T ss_dssp HHSSCCEE--EEESSCCTHHHHHHHHHCSEEEECCCBCT-----T-CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhCCCcee--cCCCCccchHHHHHHHhCCCEEEecCCCC-----c-cCCCCCCCcEeHHHHHHHHHHHHHHHHHHHhhh
Confidence 98987643 346889997 577764 77654334432 1 469999999999999999999999999988643
No 14
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.4e-49 Score=388.45 Aligned_cols=342 Identities=18% Similarity=0.161 Sum_probs=271.7
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCc-eeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCccc
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIA-YRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~-~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~ 138 (444)
+++++++++++++||++++|.++++||+++|+++|++ ++.....+|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 5678899999999999999999999999999999874 44333467999999544579999999999999876 44432
Q ss_pred CcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC---Chhhhhhccccc--ccceeEEeccc
Q 013395 139 SKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT---GAKDMIQEGVLE--NVEAIFGLHLV 210 (444)
Q Consensus 139 p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---G~~~~~~~~~~~--~~d~~~~~~~~ 210 (444)
.++|++||||+ |++++++|+|+++|++. ..++++|.|+|+++||.|+ |++.+++.+ .+ +.|+++. .+
T Consensus 91 -~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~-~~~~~~~~~i~--~e 165 (369)
T 3tx8_A 91 -VEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEH-PEWLAADLALL--GE 165 (369)
T ss_dssp -ECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHC-GGGGCCSEEEE--CC
T ss_pred -EECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhc-ccccCCCEEEE--eC
Confidence 46899999997 69999999999999874 4689999999999999984 888888875 22 3455554 34
Q ss_pred CCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--CC-CCcEEEEEEeecC
Q 013395 211 HKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID--PL-DSQVVSVAMINGG 287 (444)
Q Consensus 211 ~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~--~~-~~~t~~v~~i~gG 287 (444)
++. +.+. ...+|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+... +. ...+++++.++||
T Consensus 166 p~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG 239 (369)
T 3tx8_A 166 PTG--GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESG 239 (369)
T ss_dssp CCT--TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEEC
T ss_pred CCC--Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECC
Confidence 443 2332 2246999999999999999999999999999999999999987543221 11 1468999999999
Q ss_pred cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhC
Q 013395 288 SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILG 367 (444)
Q Consensus 288 ~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g 367 (444)
.+.|+||++|++.+|+|+.+.++.+++.++|++++++.+ .++++++++.. .+++++. .++++++.+.+++ |
T Consensus 240 ~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~----g 310 (369)
T 3tx8_A 240 VANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG---AGGALPG-LGQQVTSGLIDAV----G 310 (369)
T ss_dssp SBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE---ECCBCCC-TTSHHHHHHHHHH----C
T ss_pred CCCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec---CCCCCCC-CCCHHHHHHHHHc----C
Confidence 999999999999999999999999999999999998766 56666666322 1455443 3556666666553 6
Q ss_pred C-cccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013395 368 E-ENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAH 434 (444)
Q Consensus 368 ~-~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~ 434 (444)
. ++ ....|++|+++|.+. +|++ .+|++. ...+|++||+++++++.+++++|+.++.
T Consensus 311 ~~~~----~~~~ggtD~~~~~~~giP~~--~~Gpg~-----~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 311 REKI----RAKFGWTDVSRFSAMGIPAL--NFGAGD-----PSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp GGGE----EECCSCCTHHHHHTTTCCEE--EECSSC-----SSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCC----cccccccchHHHhhCCCCEE--EECCCC-----hhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 5 32 346788999999886 8875 367643 3579999999999999999999999875
No 15
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2.8e-47 Score=385.28 Aligned_cols=352 Identities=14% Similarity=0.098 Sum_probs=282.8
Q ss_pred hHHHHHHHHHHHhcCCCCCc----------chHHHHHHHHHHHHHcCCc-eeccCCCceEEEEe-CCC--CCcEEEEEec
Q 013395 58 TVNWMKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSG--SPPFVALRAD 123 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~----------~e~~~~~~i~~~l~~~g~~-~~~~~~~~n~~~~~-~~~--~~~~ill~~H 123 (444)
++++++++++++++|||.++ .|.++++||+++|+++|++ ++. +..+|+++++ +++ ++|+|+|+||
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d~~~nv~a~~~g~~~~~~~~v~l~~H 103 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-DDNGYVMATLPANTDKDVPVIGFLAH 103 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTSCEEEEECCBSSSCCCCEEEEEE
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-CCCcEEEEEeCCCCCCCCCeEEEEEE
Confidence 45788999999999999987 5689999999999999997 665 4588999999 443 3689999999
Q ss_pred cCccCCcCCCCCcccCc-----CC---------------------------CccccCcc-------hHHHHHHHHHHHHH
Q 013395 124 MDALPIQELVEWEHKSK-----ID---------------------------GKMHACGH-------DAHVAMLLGAAKIL 164 (444)
Q Consensus 124 ~D~vp~~~~~~w~~~p~-----~~---------------------------g~i~grG~-------k~~~a~~l~a~~~l 164 (444)
+||||+.+ +|+++|. ++ |+|||||+ |++++++|+|+++|
T Consensus 104 ~DtVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L 181 (434)
T 3ife_A 104 LDTATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYL 181 (434)
T ss_dssp CCBCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHH
Confidence 99999643 6877762 22 58999995 89999999999999
Q ss_pred HhccccCCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC
Q 013395 165 QEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA 244 (444)
Q Consensus 165 ~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss 244 (444)
++.+..++++|.|+|+++||.|.|++.+.... + ++|+++++++. +.|.+.. ..+|..+++|+++|+++|||
T Consensus 182 ~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag 252 (434)
T 3ife_A 182 IHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPG 252 (434)
T ss_dssp HTCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGG
T ss_pred HhCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCC
Confidence 99888899999999999999998988875442 2 57888888642 3354433 23699999999999999998
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHH
Q 013395 245 -IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIK 323 (444)
Q Consensus 245 -~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 323 (444)
.|+.|+||+..+++++..|++..... ..+.+++.+++| ..|+||++|++.+|+|+.+.++.+++.++|+++++
T Consensus 253 ~~P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~ 326 (434)
T 3ife_A 253 TAKNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVK 326 (434)
T ss_dssp GCTTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCcccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 69999999999999999988752111 111222334444 37899999999999999999999999999999999
Q ss_pred HHHHhhC-CceeEEeccCCCCCC-CCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccC
Q 013395 324 GQAAVHR-CSAEVDFSGREHPTL-PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGML 400 (444)
Q Consensus 324 ~~a~~~~-~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~ 400 (444)
+.+..++ +++++++... .++. ++++.|+++++.+++++++ +|.++. ....+|++|+++|.+. +|+++ +|++
T Consensus 327 ~~~~~~g~~~~~v~~~~~-~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~--~~~~~ggtD~~~~~~~GiP~~~--~g~g 400 (434)
T 3ife_A 327 QMQEKYGQDAVVLEMNDQ-YYNMLEKIEPVREIVDIAYEAMKS-LNIEPN--IHPIRGGTDGSQLSYMGLPTPN--IFTG 400 (434)
T ss_dssp HHHHHHCGGGEEEEEEEE-ECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE--ECCBSSCCHHHHHHHTTCCCCE--ECCS
T ss_pred HHHHhcCCceEEEEEeec-ccchhccccCCHHHHHHHHHHHHH-hCCCCE--EeecccCchHHHHhhCCCcEEE--eCCC
Confidence 9888887 5666665421 1221 2356788899999999998 687653 3568899999999987 99874 4653
Q ss_pred CCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 401 NDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 401 ~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
. ..+|++||+++++++.+++++|+.++.+++.+
T Consensus 401 ~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~la~~ 433 (434)
T 3ife_A 401 G------ENYHGKFEYVSVDVMEKAVQVIIEIARRFEEQ 433 (434)
T ss_dssp E------ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------CCCcCCceeecHHHHHHHHHHHHHHHHHHhhc
Confidence 2 36999999999999999999999999988753
No 16
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.9e-47 Score=391.52 Aligned_cols=364 Identities=13% Similarity=0.124 Sum_probs=286.3
Q ss_pred hHH-HHHHHHHHHhcCCCCCcch---HHHHHHHHHHHHHcCCceecc--CCCceEEEEe-CC-CCCcEEEEEeccCccCC
Q 013395 58 TVN-WMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWP--VAKTGVVATV-GS-GSPPFVALRADMDALPI 129 (444)
Q Consensus 58 ~~~-~l~~l~~~~~~~ps~s~~e---~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~-~~-~~~~~ill~~H~D~vp~ 129 (444)
..+ ++++++++++++||.+++| .++++||+++|+++|++++.. .+.+||++++ ++ .++|+|+|+||+||||+
T Consensus 41 ~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~ 120 (481)
T 2pok_A 41 HVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPA 120 (481)
T ss_dssp HHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCS
T ss_pred hhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCC
Confidence 567 8999999999999999876 899999999999999998754 3478999999 44 35689999999999999
Q ss_pred cCCCCCcccCc----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhccc--cc
Q 013395 130 QELVEWEHKSK----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGV--LE 199 (444)
Q Consensus 130 ~~~~~w~~~p~----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~--~~ 199 (444)
++.++|.++|. +||++||||+ |++++++|+|+++|++.+..++++|.|+|+++||.| .|++.+++++. ++
T Consensus 121 ~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~ 200 (481)
T 2pok_A 121 DGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLR 200 (481)
T ss_dssp CSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTHHHHHHHHHHHHT
T ss_pred CCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhHHHHHHHhHhhcc
Confidence 88778987773 5899999995 899999999999999986678999999999999998 48888887641 33
Q ss_pred ccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecC--CCCCCCCCCCCHHHHHHHHHHHHHHhh----------
Q 013395 200 NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKG--GHAAIPQHCIDPILAVSSSVISLQNIV---------- 267 (444)
Q Consensus 200 ~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~--~Hss~p~~g~nai~~~~~~l~~l~~~~---------- 267 (444)
++|++++.++.... .+... .....+|..+++|+++|++ +||+.|+.+.||+..+++++..|++..
T Consensus 201 ~~d~~i~~~~~~~~-~~~~~--i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~ 277 (481)
T 2pok_A 201 GADLLVWEQGTKNA-LEQLE--ISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYE 277 (481)
T ss_dssp TCSEEECSCCBBCT-TSCEE--EECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGG
T ss_pred CCCEEEECCCCccC-CCCee--EEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhh
Confidence 37777765432111 11111 1234579999999999999 899989999999999999999987642
Q ss_pred -------------ccc--------------CCC-------------CCCcEEEEEEeecCc----ccccccCcEEEEEEE
Q 013395 268 -------------SRE--------------IDP-------------LDSQVVSVAMINGGS----SYNMIPDSATVAGTF 303 (444)
Q Consensus 268 -------------~~~--------------~~~-------------~~~~t~~v~~i~gG~----~~nviP~~a~~~~di 303 (444)
.+. .++ ...++++++.|+||. +.|+||++|++.+|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~NvIP~~a~~~~di 357 (481)
T 2pok_A 278 EVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEV 357 (481)
T ss_dssp GSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCCEECSEEEEEEEE
T ss_pred cCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCeeccCeeEEEEEE
Confidence 000 000 024699999999986 789999999999999
Q ss_pred eCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHH
Q 013395 304 RAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDF 383 (444)
Q Consensus 304 R~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 383 (444)
|+.+.++.+.+.++|+++++..+. .++++++... .+++ ..+.|+++++.+.+++++++|.+++. ....+|++|+
T Consensus 358 R~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~~---~p~~-~~~~d~~l~~~~~~a~~~~~g~~~~~-~~~~gg~~D~ 431 (481)
T 2pok_A 358 RLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTLG---EMSY-RSDMSAPAILNVIELAKKFYPQGVSV-LPTTAGTGPM 431 (481)
T ss_dssp EECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEEE---ECCB-CCCSCSHHHHHHHHHHTTTCTTCEEE-ESCBSSCCTH
T ss_pred EeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEccC---CCcc-cCCCCCHHHHHHHHHHHHHcCCCccc-cccCCCCCch
Confidence 999999999999999999987543 4444444321 1233 34568889999999999988887633 2345556599
Q ss_pred HHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 384 AFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 384 ~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
+.|.+. +|++ .+|++..+ ..+|++||+++++++.+++++|+.++.++
T Consensus 432 ~~~~~~~g~p~v--~~G~g~~~----~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 432 HTVFDALEVPMV--AFGLGNAN----SRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp HHHHHHHCCCEE--BCCSBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEE--EecCCCcc----cCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 999875 7763 35764321 56999999999999999999999998653
No 17
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=1.1e-47 Score=380.22 Aligned_cols=337 Identities=15% Similarity=0.143 Sum_probs=270.3
Q ss_pred hHHHHHHHHHHHhcCCCCC--c---chHHHHHHHHHHHHHcCCceeccC---CCceEEEEeCCCCCcEEEEEeccCccCC
Q 013395 58 TVNWMKKMRRQIHENPELA--Y---EEFETSELIRRELDQLGIAYRWPV---AKTGVVATVGSGSPPFVALRADMDALPI 129 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s--~---~e~~~~~~i~~~l~~~g~~~~~~~---~~~n~~~~~~~~~~~~ill~~H~D~vp~ 129 (444)
..+++++++++++++||.+ + +|.++++||+++|+ |++++... +++|+++ ++++ |+|+|++|+||||+
T Consensus 7 ~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~vp~ 81 (369)
T 2f7v_A 7 LLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTVPD 81 (369)
T ss_dssp HHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBCCC
T ss_pred hhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecccCC
Confidence 5678899999999999988 8 89999999999999 99887542 4689999 8433 78999999999998
Q ss_pred cCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-C-CChhhhhhcccccc
Q 013395 130 QELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-G-TGAKDMIQEGVLEN 200 (444)
Q Consensus 130 ~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g-~G~~~~~~~~~~~~ 200 (444)
++ .|+++| .+||++||||+ |++++++|.+++. ++++|.|+|+++||. | .|++.+++++. +
T Consensus 82 ~~--~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~ 150 (369)
T 2f7v_A 82 SP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--P 150 (369)
T ss_dssp CS--SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--C
T ss_pred CC--CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--C
Confidence 76 687777 35899999996 8999999999876 789999999999998 6 49999998764 6
Q ss_pred cceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCC-CCCCHHHHHHHHHHHHHHhhcccC----CCCC
Q 013395 201 VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQ-HCIDPILAVSSSVISLQNIVSREI----DPLD 275 (444)
Q Consensus 201 ~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~-~g~nai~~~~~~l~~l~~~~~~~~----~~~~ 275 (444)
+|++++.++ +. +.+ ....+|..+++|+++|+++|+|.|+ .|.||+..+++++..|+++..+.. ++..
T Consensus 151 ~d~~i~~e~--~~--~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 222 (369)
T 2f7v_A 151 YDAVLVAEP--TM--SEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLT 222 (369)
T ss_dssp CSEEEECCC--ST--TCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEE
T ss_pred CCEEEECCC--CC--Ccc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCccc
Confidence 788887643 21 222 2344699999999999999999999 899999999999999987754321 2221
Q ss_pred CcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCC-HHH
Q 013395 276 SQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMND-VRI 354 (444)
Q Consensus 276 ~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d-~~l 354 (444)
..+++++.++||.+.|+||++|++.+|+|+.+.++.+++.++|++++++. +++++++... ..+|++..+ +++
T Consensus 223 ~~~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~l 295 (369)
T 2f7v_A 223 GLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETFRG---PSLPSGDIARAEE 295 (369)
T ss_dssp SCEEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEEEE---CCBSCSSHHHHHH
T ss_pred CCceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEecc---CCCCccCCCCCHH
Confidence 26999999999999999999999999999999999999999999987543 3556555421 245566555 789
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013395 355 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 433 (444)
Q Consensus 355 ~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l 433 (444)
++.+.+++++++|.++. ...+|++|+++|.+. +|++ .+|++ ....+|++||+++++++.+++++|+.++
T Consensus 296 ~~~~~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~Gpg-----~~~~~H~~~E~~~~~~l~~~~~~~~~~~ 365 (369)
T 2f7v_A 296 RRLAARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYGPG-----DIAQAHTADEFVTLAQLQRYVESVNRII 365 (369)
T ss_dssp HHHHHHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECCSS-----CGGGTTCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EECCC-----CccccCCCCceEEHHHHHHHHHHHHHHH
Confidence 99999999999887653 357899999999986 8865 56763 3356999999999999999999999887
Q ss_pred HH
Q 013395 434 HS 435 (444)
Q Consensus 434 ~~ 435 (444)
.+
T Consensus 366 ~~ 367 (369)
T 2f7v_A 366 NG 367 (369)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 18
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.8e-48 Score=379.82 Aligned_cols=333 Identities=17% Similarity=0.123 Sum_probs=265.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-C-CCCCcEEEEEeccCccCCcCCCCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-G-SGSPPFVALRADMDALPIQELVEW 135 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~-~~~~~~ill~~H~D~vp~~~~~~w 135 (444)
+.+++++++++++++||++++|.++++|++++|+++|++++.. .+|+++++ + .+++|+|+|.||+|+||+++ +|
T Consensus 9 ~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~--~w 84 (356)
T 3ct9_A 9 MTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN--GW 84 (356)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-----
T ss_pred HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC--CC
Confidence 4578899999999999999999999999999999999998765 78999999 5 33468999999999999876 68
Q ss_pred cccCc----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-C-CChhhhhhcccccccceeEE
Q 013395 136 EHKSK----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-G-TGAKDMIQEGVLENVEAIFG 206 (444)
Q Consensus 136 ~~~p~----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g-~G~~~~~~~~~~~~~d~~~~ 206 (444)
+.+|. ++|++||||+ |++++++|+|++.|++.+ ++++|.|+|+++||. | .|++.+++++ .++|+++.
T Consensus 85 ~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~ 160 (356)
T 3ct9_A 85 RKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIV 160 (356)
T ss_dssp ----CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEE
T ss_pred CCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEE
Confidence 77764 5899999997 789999999999999876 889999999999998 7 5999998875 36776665
Q ss_pred ecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-CCCcEEEEEEee
Q 013395 207 LHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDP-LDSQVVSVAMIN 285 (444)
Q Consensus 207 ~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~-~~~~t~~v~~i~ 285 (444)
.+ +.. +.+. ...+|..+++|+++|+++|++.| .|+||+..+++++.+|+.+..+..++ ....+++++.++
T Consensus 161 ~e--p~~--~~i~----~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~ 231 (356)
T 3ct9_A 161 GE--PTE--MQPA----IAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVIN 231 (356)
T ss_dssp CC--SBT--TCCE----EEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEE
T ss_pred cC--CCC--ceEE----EeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEe
Confidence 54 322 2221 12358899999999999999999 99999999999999999875443333 346799999999
Q ss_pred cCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHHHHHHHHHHHH
Q 013395 286 GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTA 363 (444)
Q Consensus 286 gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~ 363 (444)
||.+.|+||++|++.+|+|+.+.++.+++.++|+++++. + +++.. ..+|++ +.++++++.+.++++
T Consensus 232 gG~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~--~~~~~---~~~~~~~~~~~~~l~~~~~~~~~ 299 (356)
T 3ct9_A 232 AGTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------D--AKARS---FRLNSSRIDEKHPFVQKAVKMGR 299 (356)
T ss_dssp ECSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------E--EEESC---SCSCCEECCTTSHHHHHHHHTTC
T ss_pred cCCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------e--EEEee---ccCCCCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999998753 3 34321 123333 457778888877653
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
.+ ...+|++|++. ..+|++ .+|++. ...+|++||+++++++..++++|+.++.++|
T Consensus 300 -----~~----~~~~g~tD~~~--~~~p~v--~~G~g~-----~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 300 -----IP----FGSPTLSDQAL--MSFASV--KIGPGR-----SSRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp -----CC----EEECSCCGGGG--CCSCEE--ECCSSB-----GGGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred -----CC----cccccccchhh--cCCCEE--EECCCc-----cccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 11 24678999883 247763 467642 2469999999999999999999999987654
No 19
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=8.7e-46 Score=372.65 Aligned_cols=350 Identities=15% Similarity=0.132 Sum_probs=282.5
Q ss_pred HHHHHHHHHhcCCCCCc----------chHHHHHHHHHHHHHcCCc-eeccCCCceEEEEe-CCC--CCcEEEEEeccCc
Q 013395 61 WMKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSG--SPPFVALRADMDA 126 (444)
Q Consensus 61 ~l~~l~~~~~~~ps~s~----------~e~~~~~~i~~~l~~~g~~-~~~~~~~~n~~~~~-~~~--~~~~ill~~H~D~ 126 (444)
++++++++++++||+++ .|.++++||+++|+++|++ ++. +..+|+++++ +++ ++|+|+|+|||||
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nvia~~~g~~~~~~~~i~l~aH~D~ 81 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITL-SEKGTLMATLPANVEGDIPAIGFISHVDT 81 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTCCEEEEECCSSCSCCCCEEEEEECCB
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEE-CCCceEEEEECCCCCCCCCceEEEEeccc
Confidence 46778999999999987 6889999999999999998 654 4578999999 443 3689999999999
Q ss_pred cCCcCCCCCcccCc-------------------------------CCCccccCc-----c--hHHHHHHHHHHHHHHhcc
Q 013395 127 LPIQELVEWEHKSK-------------------------------IDGKMHACG-----H--DAHVAMLLGAAKILQEMR 168 (444)
Q Consensus 127 vp~~~~~~w~~~p~-------------------------------~~g~i~grG-----~--k~~~a~~l~a~~~l~~~~ 168 (444)
||+.+ .|.++|. .||++|||| + |++++++|+|++.|++.+
T Consensus 82 Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~ 159 (417)
T 1fno_A 82 SPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP 159 (417)
T ss_dssp CTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS
T ss_pred cCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC
Confidence 99875 5766541 245899999 4 699999999999999988
Q ss_pred ccCCceEEEEEecCCCCCCChhhhhhcccccccceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCC-CCC
Q 013395 169 ETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQ 247 (444)
Q Consensus 169 ~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss-~p~ 247 (444)
.++++|.|+|+++||.|.|++.+.++++ ++|++++++.. +.+.+. ...+|..+++|+++|+++|++ .|+
T Consensus 160 -~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~~---~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p~ 229 (417)
T 1fno_A 160 -IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDGG---GVGELE----FENFNAASVNIKIVGNNVHPGTAKG 229 (417)
T ss_dssp -CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCCC---STTBEE----CCBCEEEEEEEEEECBCCCGGGCTT
T ss_pred -CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCCC---CcCeeE----EecCCceeEEEEEEeeccCCCCCcc
Confidence 7889999999999999888888875543 56777766432 345443 234689999999999999999 699
Q ss_pred CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHH
Q 013395 248 HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAA 327 (444)
Q Consensus 248 ~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~ 327 (444)
.|.||+..+++++..|+....+........+++++.++|| |++|++.+|+|+.+.++.+++.++|++++++.+.
T Consensus 230 ~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~ 303 (417)
T 1fno_A 230 VMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGK 303 (417)
T ss_dssp TCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999876433333334568999999988 9999999999999999999999999999998877
Q ss_pred hhCCc--eeEEeccCCCCCC-CCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCC
Q 013395 328 VHRCS--AEVDFSGREHPTL-PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDS 403 (444)
Q Consensus 328 ~~~~~--~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~ 403 (444)
.++.. +++++... .++. +.++.|+++++.+.+++++ +|.++. ....+|++|+++|... +|++. +|++.
T Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~~~-- 375 (417)
T 1fno_A 304 GLHPDCYIELVIEDS-YYNMREKVVEHPHILDIAQQAMRD-CHITPE--MKPIRGGTDGAQLSFMGLPCPN--LFTGG-- 375 (417)
T ss_dssp TCCTTCCEEEEEEEE-ECCCHHHHHTSTHHHHHHHHHHHH-TTCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECCSE--
T ss_pred HcCCCceEEEEEecc-ccchhccccCCCHHHHHHHHHHHH-cCCCce--eccceeccchHhHHhcCCCEEE--EcCCC--
Confidence 77653 66665421 1111 1245788899999999999 587753 3678899999999875 89764 57643
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhcC
Q 013395 404 VGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 404 pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~~ 441 (444)
..+|++||+++++++.+++++|+.++.+++..++
T Consensus 376 ----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~~ 409 (417)
T 1fno_A 376 ----YNYHGKHEFVTLEGMEKAVQVIVRIAELTAKRGQ 409 (417)
T ss_dssp ----ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred ----CCCCCcccccCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 2489999999999999999999999999987543
No 20
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.1e-46 Score=370.25 Aligned_cols=336 Identities=16% Similarity=0.127 Sum_probs=270.7
Q ss_pred HHHHHHHHHHHhcCCCCC---cchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-C--CCCCcEEEEEeccCccCCcCC
Q 013395 59 VNWMKKMRRQIHENPELA---YEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-G--SGSPPFVALRADMDALPIQEL 132 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s---~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~--~~~~~~ill~~H~D~vp~~~~ 132 (444)
.+++++++++++++||.+ ++|.++++||+++|+++|++++.. ..|+++.+ + ++++|+|+|.+|+||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~--- 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA--- 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---
Confidence 467889999999999999 889999999999999999998754 36788877 3 234589999999999985
Q ss_pred CCCcccC-cCCCccccCcc---hHHHHHHHHHHHHHHhccccC---Cce--EEEEEecCCCCC--CChhhhhhccccccc
Q 013395 133 VEWEHKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETL---KGT--VVLIFQPAEERG--TGAKDMIQEGVLENV 201 (444)
Q Consensus 133 ~~w~~~p-~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~~EE~g--~G~~~~~~~~~~~~~ 201 (444)
+..++.+ .++|++||||+ |++++++|+|++.|++.+.++ +++ |.|+|+++||.| .|++.+++.+ ++
T Consensus 80 ~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~ 156 (364)
T 2rb7_A 80 EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RA 156 (364)
T ss_dssp CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EE
T ss_pred CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CC
Confidence 2455555 45899999996 789999999999999887766 568 999999999974 5999998875 55
Q ss_pred ceeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-C--CCcE
Q 013395 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDP-L--DSQV 278 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~-~--~~~t 278 (444)
|+++. .++++|.+ +.. ..+|..+++|+++|+++|++.|+.|+||+..+++++..|+++.. ++ . ...+
T Consensus 157 d~~i~--~d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~ 226 (364)
T 2rb7_A 157 DYVVA--LDGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRT 226 (364)
T ss_dssp EEEEE--CSSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCE
T ss_pred CEEEE--ccCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCce
Confidence 65554 45566776 332 23589999999999999999999999999999999999988732 22 2 3679
Q ss_pred EEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHH
Q 013395 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHV 358 (444)
Q Consensus 279 ~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 358 (444)
++++.++||.+.|+||++|++.+|+|+.+.++.+++.++++++++. +++... .+++ ..+.++++++.+
T Consensus 227 ~~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~----~~~~-~~~~~~~l~~~~ 294 (364)
T 2rb7_A 227 VNLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVR----TVPV-FLAADSPYTERL 294 (364)
T ss_dssp EEEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEE----EECC-EECCCCHHHHHH
T ss_pred EEEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEecc----CCcc-ccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999998753 333111 1233 233466899999
Q ss_pred HHHHHHHhCCcccccCCCCCcCcHHHHHHH-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 359 RRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 359 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
.++++ .+|. ...|++|+++|.+ .+|++. +|++. ....|++||+++++++.+++++|+.++.+++
T Consensus 295 ~~~~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~Gp~~-----~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 359 (364)
T 2rb7_A 295 LALSG-ATAG-------KAHGASDARYLGENGLTGVV--WGAEG-----FNTLHSRDECLHIPSLQSIYDPLMQLAREME 359 (364)
T ss_dssp HHHHC-CEEE-------EESSCCGGGGTGGGTCCEEE--CCCCC-----TTCTTSTTCEEETTHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-hcCC-------CCCCCchHHHHHhcCCCEEE--ECCCC-----ccccCCCCccccHHHHHHHHHHHHHHHHHHH
Confidence 98886 4442 2678899999988 588643 67643 2125999999999999999999999999998
Q ss_pred hh
Q 013395 438 VN 439 (444)
Q Consensus 438 ~~ 439 (444)
.+
T Consensus 360 ~~ 361 (364)
T 2rb7_A 360 EH 361 (364)
T ss_dssp C-
T ss_pred hh
Confidence 64
No 21
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=1.5e-45 Score=377.66 Aligned_cols=352 Identities=13% Similarity=0.092 Sum_probs=241.4
Q ss_pred hHHHHHHHHHHHhcCCCCCcch------------HHHHHHHHHHHHHcCCceeccCCCceEEEEe--CCCCCcEEEEEec
Q 013395 58 TVNWMKKMRRQIHENPELAYEE------------FETSELIRRELDQLGIAYRWPVAKTGVVATV--GSGSPPFVALRAD 123 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e------------~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~--~~~~~~~ill~~H 123 (444)
..++++++++++++|||++++| .++++|++++|+++|++++..+ |+++.+ +. .+|+|+|+||
T Consensus 32 ~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~g~-~~~~i~l~~H 107 (492)
T 3khx_A 32 YEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAGK-GNDVLGILCH 107 (492)
T ss_dssp THHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEEEC-SSCEEEEEEE
T ss_pred hHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEeCC-CCCEEEEEEe
Confidence 6788999999999999999876 4999999999999999987653 444443 43 3689999999
Q ss_pred cCccCCcCCCCCcccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhc
Q 013395 124 MDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQE 195 (444)
Q Consensus 124 ~D~vp~~~~~~w~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~ 195 (444)
+||||+++ .|.++| ++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++||.| .|+++++++
T Consensus 108 ~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~ 185 (492)
T 3khx_A 108 VDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKT 185 (492)
T ss_dssp CCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCCCTTSHHHHH
T ss_pred ccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCcCHHHHHHh
Confidence 99999865 798776 56899999996 899999999999999998889999999999999998 499999887
Q ss_pred ccccccceeEEecccCC----------------------------------------CCCce--eeecc-----------
Q 013395 196 GVLENVEAIFGLHLVHK----------------------------------------YPTGV--VASRP----------- 222 (444)
Q Consensus 196 ~~~~~~d~~~~~~~~~~----------------------------------------~~~g~--v~~~~----------- 222 (444)
.. .+|+.+..+.+.. .|... +...+
T Consensus 186 ~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~ 263 (492)
T 3khx_A 186 EE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE 263 (492)
T ss_dssp SC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHH
T ss_pred Cc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccchHHHHHHHH
Confidence 42 2333332110000 01100 11111
Q ss_pred ----Ccccccce-----eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh-------c-----c-----c
Q 013395 223 ----GDFLAGCG-----SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQ------NIV-------S-----R-----E 270 (444)
Q Consensus 223 ----g~~~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~------~~~-------~-----~-----~ 270 (444)
....+|.. +++|+++|+++|+|.|+.|+|||..+++++.+|+ ... . . .
T Consensus 264 ~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 343 (492)
T 3khx_A 264 YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKF 343 (492)
T ss_dssp HHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-
T ss_pred HHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCcc
Confidence 01225777 8999999999999999999999999999998876 110 0 0 0
Q ss_pred CC-CCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCcc
Q 013395 271 ID-PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTM 349 (444)
Q Consensus 271 ~~-~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 349 (444)
.+ ..+..++|++.+++|. |++|++.+|+|+++..+.+++.++++++++ .+++++++... .+++ ..+
T Consensus 344 ~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~~---~~p~-~~~ 410 (492)
T 3khx_A 344 HTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGKV---QPPH-YVD 410 (492)
T ss_dssp ------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEEE---ECCB-CCG
T ss_pred ccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEecc---CCce-ecC
Confidence 11 2356799999999885 999999999999999999999999998875 35656655432 1232 235
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIH 429 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~ 429 (444)
.|+++++.+.+++++++|.++. +..++|++|++++.+.+| +|+.. ||....+|++||+++++++.+++++|
T Consensus 411 ~d~~lv~~l~~a~~~~~G~~~~--~~~~gggtDa~~~~~~v~-----~G~~f--Pg~~~~~H~~dE~v~i~~l~~~~~i~ 481 (492)
T 3khx_A 411 KNDPFVQKLVTAYRNQTNDMTE--PYTIGGGTYARNLDKGVA-----FGAMF--SDSEDLMHQKNEYITKKQLFNATSIY 481 (492)
T ss_dssp GGCHHHHHHHHHHHTTCC--------------------------------------------CCSCEEEHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCCCe--EEeeehhHHHHHhhCceE-----ECCcC--CCCCCCCCCCccCcCHHHHHHHHHHH
Confidence 5778999999999998887753 467899999999886443 33321 45557899999999999999999999
Q ss_pred HHHHHHHhhh
Q 013395 430 AAFAHSYLVN 439 (444)
Q Consensus 430 ~~~l~~~~~~ 439 (444)
+.++.+++.+
T Consensus 482 ~~~l~~l~~~ 491 (492)
T 3khx_A 482 LEAIYSLCVE 491 (492)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhhc
Confidence 9999999865
No 22
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.9e-44 Score=363.58 Aligned_cols=346 Identities=14% Similarity=0.138 Sum_probs=282.5
Q ss_pred hHHHHHHHHHHHhcCCCCC----------cchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCC-CcEEEEEeccC
Q 013395 58 TVNWMKKMRRQIHENPELA----------YEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGS-PPFVALRADMD 125 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s----------~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~-~~~ill~~H~D 125 (444)
..++++++++++++|||.+ ++|.++++||+++|+++|++++.. ..+|+++++ ++++ +|+|+|++|||
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~-~~gnv~a~~~g~~~~~~~i~l~~H~D 85 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD-EVGNLYGRLNGTEYPQEVVLSGSHID 85 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC-TTSCEEEEECCSSEEEEEEEEEEECC
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe-cCCcEEEEEcCCCCCCCEEEEEEecC
Confidence 3467888899999999987 678999999999999999998754 356999999 5443 38999999999
Q ss_pred ccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC------Chhhhhh----c
Q 013395 126 ALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDMIQ----E 195 (444)
Q Consensus 126 ~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~~~----~ 195 (444)
|||.+. | .++|++++++|+|+++|++.+.+++++|.|+|+++||.++ |++.+.. +
T Consensus 86 ~Vp~~g---~------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~ 150 (423)
T 1z2l_A 86 TVVNGG---N------------LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPD 150 (423)
T ss_dssp CCTTBC---S------------STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGG
T ss_pred CCCCCC---c------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHH
Confidence 999641 2 2448899999999999999888899999999999999852 7777765 2
Q ss_pred ccc-----------------------------cccceeEEecccCC-------CCCceeeeccCcccccceeEEEEEEec
Q 013395 196 GVL-----------------------------ENVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGSFKAKISGK 239 (444)
Q Consensus 196 ~~~-----------------------------~~~d~~~~~~~~~~-------~~~g~v~~~~g~~~~G~~~~~i~v~G~ 239 (444)
+.. +++|.++.+|.+++ .+.+.+. ..+|..+++|+++|+
T Consensus 151 ~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~-----~~~g~~~~~i~v~G~ 225 (423)
T 1z2l_A 151 DVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVN-----AIVGQRRYTVTLNGE 225 (423)
T ss_dssp GTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEE-----EECEEEEEEEEEECC
T ss_pred HHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEe-----eEecceEEEEEEEeE
Confidence 111 14567777776543 1223222 235889999999999
Q ss_pred CCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHH
Q 013395 240 GGHAA-IPQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRE 316 (444)
Q Consensus 240 ~~Hss-~p~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~ 316 (444)
++||| .|+ .++||+..+++++..|+++..+ .++ ..+++++.++|| .+.|+||++|++.+|+|+.+.++.+++.+
T Consensus 226 ~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~ 302 (423)
T 1z2l_A 226 SNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQ 302 (423)
T ss_dssp CEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHH
Confidence 99999 695 8999999999999999887543 222 468999999997 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEE
Q 013395 317 RIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLL 396 (444)
Q Consensus 317 ~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 396 (444)
+|++++++.+..++++++++.. ..+|++..|+++++.++++++++ |.++. +...+|++|+++|.+.+|+++.
T Consensus 303 ~i~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~p~~~~- 374 (423)
T 1z2l_A 303 QLENDMRAICDEMDIGIDIDLW----MDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRVPTCMI- 374 (423)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEE----EEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTSCEEEE-
T ss_pred HHHHHHHHHHHHhCCeEEEEEe----cCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhCCEEEE-
Confidence 9999999888888988877764 35667778899999999999998 87653 3568899999999888997654
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 397 LGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 397 ~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
+|+.. ...+|++||+++++++.+++++|+.++.+++.++
T Consensus 375 ~~p~~-----~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 413 (423)
T 1z2l_A 375 FIPSI-----NGISHNPAERTNITDLAEGVKTLALMLYQLAWQK 413 (423)
T ss_dssp EECCG-----GGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EeCCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 44422 1459999999999999999999999999998754
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=6.6e-44 Score=357.86 Aligned_cols=341 Identities=17% Similarity=0.194 Sum_probs=283.0
Q ss_pred HHHHHHHHHHhcCCCC----------CcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCC-CcEEEEEeccCcc
Q 013395 60 NWMKKMRRQIHENPEL----------AYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGS-PPFVALRADMDAL 127 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~----------s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~-~~~ill~~H~D~v 127 (444)
+++++++++++++|+. +++|.++++||+++|+++|++++.+ ..+|+++++ ++++ +|+|+|.+|||+|
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYED-AAGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEEC-TTCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 6778889999999983 7899999999999999999998864 456999999 5443 6999999999999
Q ss_pred CCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC------CChhhhhh-------
Q 013395 128 PIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQ------- 194 (444)
Q Consensus 128 p~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~------- 194 (444)
|.+ | ...+|++++++|++++.|++.+..++++|.|+|+++||.+ .|++.++.
T Consensus 84 ~~~------------g---~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNG------------G---CFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTB------------C---SSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCC------------C---ccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 963 1 1244789999999999999988889999999999999963 28888762
Q ss_pred -----c-----------cc----c-----c--ccceeEEecccCC-------CCCceeeeccCcccccceeEEEEEEecC
Q 013395 195 -----E-----------GV----L-----E--NVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGSFKAKISGKG 240 (444)
Q Consensus 195 -----~-----------~~----~-----~--~~d~~~~~~~~~~-------~~~g~v~~~~g~~~~G~~~~~i~v~G~~ 240 (444)
+ |+ + + ++|+++.+|.+++ .+.+.+. ..+|..+++|+++|++
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~-----~~~g~~~~~i~v~G~~ 223 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT-----GIAGLIWVKFTIEGKA 223 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEE-----EECEEEEEEEEEECCC
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEE-----EeccceEEEEEEEEEc
Confidence 1 11 1 2 5677888887654 2333332 2359999999999999
Q ss_pred CCC-CCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHHHHHH
Q 013395 241 GHA-AIP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRER 317 (444)
Q Consensus 241 ~Hs-s~p-~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~v~~~ 317 (444)
+|+ +.| +.++||+..+++++..|+++. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.+++.++
T Consensus 224 ~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~ 299 (408)
T 3n5f_A 224 EHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKA 299 (408)
T ss_dssp EETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHH
Confidence 999 579 589999999999999999875 2222 679999999998 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEe
Q 013395 318 IEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLL 397 (444)
Q Consensus 318 i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~ 397 (444)
|++++++.+..+++++++++. ..+|++..|+++++.++++++++ |.++.. ...+|++|+++|.+.+|+++++.
T Consensus 300 i~~~~~~~a~~~g~~~~i~~~----~~~p~~~~d~~l~~~~~~a~~~~-g~~~~~--~~~~ggtD~~~~~~~iP~~~~~~ 372 (408)
T 3n5f_A 300 IAVRAETIAKERNVRVTTERL----QEMPPVLCSDEVKRAAEAACQKL-GYPSFW--LPSGAAHDSVQLAPICPIGMIFV 372 (408)
T ss_dssp HHHHHHHHHHHHTCEEEEEEE----EEECCEECCHHHHHHHHHHHHHH-TCCCCE--EEESSCCTTTTTTTTSCEEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEEe----cCCCCcCCCHHHHHHHHHHHHHc-CCCccc--CCCcCchHHHHHHHHCCEEEEEe
Confidence 999999988889999888865 46677788999999999999998 876432 45778999999988899877666
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 398 GMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 398 G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
|... ..+|++||+++++++..++++|+.++.++..
T Consensus 373 ~~~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 373 RSQD------GVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp CCGG------GCCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCC------CCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 6432 3599999999999999999999999988753
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=7.2e-44 Score=365.47 Aligned_cols=348 Identities=16% Similarity=0.186 Sum_probs=274.0
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCC----CCCcEEEEEeccCccCCcCCC--
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS----GSPPFVALRADMDALPIQELV-- 133 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~----~~~~~ill~~H~D~vp~~~~~-- 133 (444)
+++++++++++++|+.+++|.++++||+++|+++|++++.. ..+|+++++++ .++|+|+|.||||+||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERD-EVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 67889999999999999999999999999999999998754 35799999942 245899999999999997654
Q ss_pred -CCcccC----cCCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhccccccc
Q 013395 134 -EWEHKS----KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENV 201 (444)
Q Consensus 134 -~w~~~p----~~~g~i~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~ 201 (444)
+|.++| ++||++||||+ |++++++|++++. .+ .++++|.|+|+++||.|+ |++.++++++ ++
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGMEGAIGLRPNWL--RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSCC--CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCCHHHHHHHHhcc--CC
Confidence 798877 36899999997 4889999988863 33 378999999999999984 9999887643 37
Q ss_pred ceeEEecccCCCCCcee--eeccC------------cccccceeEEEEEEe-cCCCCCCC-CCC-CCHHHHHHHHHHHHH
Q 013395 202 EAIFGLHLVHKYPTGVV--ASRPG------------DFLAGCGSFKAKISG-KGGHAAIP-QHC-IDPILAVSSSVISLQ 264 (444)
Q Consensus 202 d~~~~~~~~~~~~~g~v--~~~~g------------~~~~G~~~~~i~v~G-~~~Hss~p-~~g-~nai~~~~~~l~~l~ 264 (444)
|.++..++++ .+.+ +.+.+ ...+| .+++|+++| +++|||.| +.+ .||+..+++++..|+
T Consensus 164 d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 8877654332 2333 22222 13346 889999999 89999986 776 799999999999998
Q ss_pred HhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEE----------------------------------------e
Q 013395 265 NIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTF----------------------------------------R 304 (444)
Q Consensus 265 ~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~di----------------------------------------R 304 (444)
.+.. ..+++++.++||.+.|+||++|++.+++ |
T Consensus 240 ~~~~-------~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQP-------HFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHCT-------TCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hccC-------CCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 8621 3578999999999999999999999999 8
Q ss_pred CCChhhHHHHHHHHHHH---------------------------------------------------HHHHHHhhCCce
Q 013395 305 AFNKKRFNALRERIEEI---------------------------------------------------IKGQAAVHRCSA 333 (444)
Q Consensus 305 ~~~~~~~~~v~~~i~~~---------------------------------------------------~~~~a~~~~~~~ 333 (444)
+.+.++.+.+.+.|+++ ++..+..+++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI 392 (487)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE
Confidence 88999988888887765 334566677777
Q ss_pred eEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCc-EEEeccCCCCCCCCCCCCC
Q 013395 334 EVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGS-FLLLGMLNDSVGSLYPLHS 412 (444)
Q Consensus 334 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~~H~ 412 (444)
++... .+++ ..+.|+++++.+.+++++++|.++.+ ...+|++|+++|.+.+|++ ++.+|+.. ..+|+
T Consensus 393 ~~~~~---~p~~-~~~~d~~l~~~~~~~~~~~~G~~~~~--~~~~gg~D~~~~~~~~pg~~~v~~Gp~~------~~~H~ 460 (487)
T 2qyv_A 393 NLSGD---YPGW-EPQSHSDILDLTKTIYAQVLGTDPEI--KVIHAGLECGLLKKIYPTIDMVSIGPTI------RNAHS 460 (487)
T ss_dssp EEEEE---ECCB-CCCSCCHHHHHHHHHHHHHHSSCCEE--EEESSCCTHHHHHHHCTTSEEEECCCCE------ESTTS
T ss_pred EECCC---CCCC-CCCCCCHHHHHHHHHHHHHhCCCCeE--EEEeccccHHHHHhhCCCCCEEEECCCC------CCCCC
Confidence 66532 1333 23457889999999999988987543 5688999999999887764 45667632 45999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 413 PYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 413 ~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
|||+++++++.+++++|+.++.+++
T Consensus 461 ~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 461 PDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCceeEHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998876
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1.3e-44 Score=369.35 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=277.7
Q ss_pred HHHHHHHHHH-hcCCCC-----------------CcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEE
Q 013395 60 NWMKKMRRQI-HENPEL-----------------AYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVAL 120 (444)
Q Consensus 60 ~~l~~l~~~~-~~~ps~-----------------s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill 120 (444)
++++++++++ ++|||. +++|.++++||+++|+++|++++.. ..+|+++++ +++++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeEEE
Confidence 5677888899 999876 4678999999999999999998753 467999999 5445579999
Q ss_pred EeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-----C-Chhhhhh
Q 013395 121 RADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQ 194 (444)
Q Consensus 121 ~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~ 194 (444)
+|||||||++. | | ++|++++++|+|+++|++.+.+++++|.|+|+++||.+ . |++.+..
T Consensus 111 ~~H~DtVp~~g---~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEAG---K----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSBC---S----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCCC---C----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 99999999752 3 2 56899999999999999998889999999999999983 2 7777754
Q ss_pred c---------------------------ccc---------cccceeEEecccCCCCCceeeeccC--cccccceeEEEEE
Q 013395 195 E---------------------------GVL---------ENVEAIFGLHLVHKYPTGVVASRPG--DFLAGCGSFKAKI 236 (444)
Q Consensus 195 ~---------------------------~~~---------~~~d~~~~~~~~~~~~~g~v~~~~g--~~~~G~~~~~i~v 236 (444)
. ++. +++|+.+.+|.+++...+..+...+ ...+|..+++|++
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v 255 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTV 255 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEE
Confidence 1 111 2456667776554411000000011 1225899999999
Q ss_pred EecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC-cccccccCcEEEEEEEeCCChhhHHH
Q 013395 237 SGKGGHAA-IPQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNA 313 (444)
Q Consensus 237 ~G~~~Hss-~p~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG-~~~nviP~~a~~~~diR~~~~~~~~~ 313 (444)
+|+++||| .|+ .+.||+..+++++..|+.+..+. ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.++
T Consensus 256 ~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~ 330 (474)
T 2v8h_A 256 HGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLAT 330 (474)
T ss_dssp ECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHH
T ss_pred EeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHH
Confidence 99999999 587 79999999999999998865432 579999999998 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---hCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhC-C-cccccCCCCCcCcHHHHHHH
Q 013395 314 LRERIEEIIKGQAAV---HRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILG-E-ENVKLAPIFTGSEDFAFFLD 388 (444)
Q Consensus 314 v~~~i~~~~~~~a~~---~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g-~-~~~~~~~~~~g~tD~~~~~~ 388 (444)
+.++|++++++.+.. ++++++++.. ..+|++..|+++++.+.++++++ | . ++. ....+|++|+++|.+
T Consensus 331 i~~~i~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~~--~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 331 MLKEAAAEFDRLIKINDGGALSYESETL----QVSPAVNFHEVCIECVSRSAFAQ-FKKDQVR--QIWSGAGHDSCQTAP 403 (474)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCEEEEEEE----EEECCEECCHHHHHHHHHHHHHH-SCGGGEE--EEEESSCCTHHHHTT
T ss_pred HHHHHHHHHHHHHhhcccCCcEEEEEEe----cCCCCccCCHHHHHHHHHHHHHc-CCCCcce--ecCCcCCccHHHHHh
Confidence 999999999887666 7777777654 45666778999999999999998 8 6 543 356889999999988
Q ss_pred HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 389 EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 389 ~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
.+|+++. +|+.. ...+|++||+++++++.+++++|+.++.+++..
T Consensus 404 ~~P~~~~-fgp~~-----~~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~ 448 (474)
T 2v8h_A 404 HVPTSMI-FIPSK-----DGLSHNYYEYSSPEEIENGFKVLLQAIINYDNY 448 (474)
T ss_dssp TSCEEEE-EECCG-----GGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEE-EeCCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8997554 44432 246999999999999999999999999998864
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.3e-43 Score=363.03 Aligned_cols=348 Identities=17% Similarity=0.162 Sum_probs=268.3
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeC-C---CCCcEEEEEeccCccCCcCCC-
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-S---GSPPFVALRADMDALPIQELV- 133 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~-~---~~~~~ill~~H~D~vp~~~~~- 133 (444)
.+++++++++++++|+++++|.++++||+++|+++|++++.+ ..+|++++++ + .++|+|+|.||+|+||+.+.+
T Consensus 13 ~~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~ 91 (490)
T 3mru_A 13 PAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDT 91 (490)
T ss_dssp SHHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTS
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCc
Confidence 377889999999999999999999999999999999998764 4679999994 3 246899999999999997643
Q ss_pred --CCcccC----cCCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccc
Q 013395 134 --EWEHKS----KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLEN 200 (444)
Q Consensus 134 --~w~~~p----~~~g~i~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~ 200 (444)
+|.++| +++|++||||+ |+++|++|+++ ++ ...++++|.|+|++|||.| .|++.+++..+ +
T Consensus 92 ~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~ 165 (490)
T 3mru_A 92 DHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGWL--K 165 (490)
T ss_dssp CCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSSC--C
T ss_pred ccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhccc--C
Confidence 798887 46899999997 47888888765 23 3356899999999999998 59999876532 4
Q ss_pred cceeEEecccCC--CCCceeeecc---------CcccccceeEEEEEEe-cCCCCCC-CCCCC-CHHHHHHHHHHHHHHh
Q 013395 201 VEAIFGLHLVHK--YPTGVVASRP---------GDFLAGCGSFKAKISG-KGGHAAI-PQHCI-DPILAVSSSVISLQNI 266 (444)
Q Consensus 201 ~d~~~~~~~~~~--~~~g~v~~~~---------g~~~~G~~~~~i~v~G-~~~Hss~-p~~g~-nai~~~~~~l~~l~~~ 266 (444)
.|+++.++.... ...++.+..+ ....+|..+++|+++| +++||+. |+.|+ |||..+++++..|++.
T Consensus 166 ~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~ 245 (490)
T 3mru_A 166 GDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE 245 (490)
T ss_dssp SSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT
T ss_pred CCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc
Confidence 677776653211 0111111110 1345699999999999 9999996 99999 9999999999998762
Q ss_pred hcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHH--------------------
Q 013395 267 VSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQA-------------------- 326 (444)
Q Consensus 267 ~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a-------------------- 326 (444)
.+++++.++||.+.|+||++|++.+++|.......+++.+++.+.++...
T Consensus 246 ----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 315 (490)
T 3mru_A 246 ----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQV 315 (490)
T ss_dssp ----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCE
T ss_pred ----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCcccc
Confidence 35889999999999999999999998886655555555544444433222
Q ss_pred ------------------------------------------------------------------------HhhCCcee
Q 013395 327 ------------------------------------------------------------------------AVHRCSAE 334 (444)
Q Consensus 327 ------------------------------------------------------------------------~~~~~~~~ 334 (444)
..+|.+++
T Consensus 316 ~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~ 395 (490)
T 3mru_A 316 FAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIE 395 (490)
T ss_dssp ECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEE
Confidence 12333333
Q ss_pred EEeccCCCCCCCCc--cCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCc-EEEeccCCCCCCCCCCCC
Q 013395 335 VDFSGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGS-FLLLGMLNDSVGSLYPLH 411 (444)
Q Consensus 335 ~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~~pg~~~~~H 411 (444)
+. ..+|++ +.|+++++.+.+++++++|.++. ....+|++|+++|.+.+|++ ...|||.. .++|
T Consensus 396 ~~------~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~ggg~d~~~~~~~~p~~~~v~fGp~~------~~~H 461 (490)
T 3mru_A 396 FS------GAYPGWKPDADSEIMAIFRDMYEGIYGHKPN--IMVIHAGLECGLFKEPYPNMDMVSFGPTI------KFPH 461 (490)
T ss_dssp EE------EEECCBCCCTTCHHHHHHHHHHHTTSSSCCC--CEEESSCCHHHHTTSSCTTCEEEECCCCE------ESTT
T ss_pred ec------CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEecHHHHHHHHhCCCCCEEEECCCC------CCCC
Confidence 32 233444 45678999999999999998754 46899999999999888862 45678765 3499
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHh
Q 013395 412 SPYFTIDEHVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 412 ~~nE~i~i~~~~~~~~~~~~~l~~~~ 437 (444)
+|||+++++++.+++++|..++.++.
T Consensus 462 ~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 462 SPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp STTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCccccHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998764
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=5.8e-42 Score=350.05 Aligned_cols=354 Identities=15% Similarity=0.133 Sum_probs=267.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcch------------HHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccC
Q 013395 58 TVNWMKKMRRQIHENPELAYEE------------FETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMD 125 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e------------~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D 125 (444)
..++++++++++++|||.+++| .++++|++++|+++|++++.. +..++++.+|.+ +|+|+|+||||
T Consensus 12 ~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~~-~~~i~l~~H~D 89 (470)
T 1lfw_A 12 KKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGAG-DKRLGIIGHMD 89 (470)
T ss_dssp THHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECCC-SSEEEEEEECC
T ss_pred hHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCCC-CCeEEEEEeec
Confidence 4578899999999999999876 789999999999999998754 346788888543 68999999999
Q ss_pred ccCCcCCCCCcccC----c-CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcc
Q 013395 126 ALPIQELVEWEHKS----K-IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 126 ~vp~~~~~~w~~~p----~-~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (444)
|||+++ +|+++| + +||++||||+ |++++++|+|+++|++.+.+++++|.|+|+++||.|+ |++.+++++
T Consensus 90 ~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~ 167 (470)
T 1lfw_A 90 VVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHE 167 (470)
T ss_dssp BCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHS
T ss_pred ccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccHHHHHHhC
Confidence 999876 787766 3 6999999994 7999999999999999888899999999999999985 899988764
Q ss_pred cccc----cce----eEE--------ecccCCCCCce---eeeccCc--------------------------------c
Q 013395 197 VLEN----VEA----IFG--------LHLVHKYPTGV---VASRPGD--------------------------------F 225 (444)
Q Consensus 197 ~~~~----~d~----~~~--------~~~~~~~~~g~---v~~~~g~--------------------------------~ 225 (444)
...+ .|. ++. ++..+....+. .....|. .
T Consensus 168 ~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (470)
T 1lfw_A 168 PTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKE 247 (470)
T ss_dssp CCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhc
Confidence 3211 232 111 11000000000 0000000 1
Q ss_pred cccce-----eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh---ccc--------------CCC-CCC
Q 013395 226 LAGCG-----SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQ------NIV---SRE--------------IDP-LDS 276 (444)
Q Consensus 226 ~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~------~~~---~~~--------------~~~-~~~ 276 (444)
.+|.. +++|+++|+++|++.|+.|+||+..+++++..|+ .+. .+. .++ ...
T Consensus 248 ~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (470)
T 1lfw_A 248 LDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGD 327 (470)
T ss_dssp CEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEE
T ss_pred cccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCccccccccc
Confidence 13443 7999999999999999999999999999998775 211 110 001 134
Q ss_pred cEEEEEEeecCcccccccCc-EEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCc--cCCHH
Q 013395 277 QVVSVAMINGGSSYNMIPDS-ATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT--MNDVR 353 (444)
Q Consensus 277 ~t~~v~~i~gG~~~nviP~~-a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~d~~ 353 (444)
.+++++.+++ +|++ |++.+|+|+++.++.+.+.++|+++++. + +++++. ..+|++ +.|++
T Consensus 328 ~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g--~~v~~~----~~~~~~~~~~d~~ 390 (470)
T 1lfw_A 328 LASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----I--LDVTYN----GFEEPHYVPGSDP 390 (470)
T ss_dssp CEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----T--EEEECS----CCBCCEECCTTCH
T ss_pred ceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----C--eEEEEE----eCCCceeeCCCCH
Confidence 5888887764 6999 9999999999999999999999998754 3 344543 344444 35788
Q ss_pred HHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013395 354 IYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 433 (444)
Q Consensus 354 l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l 433 (444)
+++.+.+++++++|.++.+ ..++|++|++++. |+ +.+|+.. ||+...+|+|||+++++++.+++++|+.++
T Consensus 391 l~~~~~~a~~~~~g~~~~~--~~~~g~~d~~~~~---~~--v~~G~~~--pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 461 (470)
T 1lfw_A 391 MVQTLLKVYEKQTGKPGHE--VVIGGGTYGRLFE---RG--VAFGAQP--ENGPMVMHAANEFMMLDDLILSIAIYAEAI 461 (470)
T ss_dssp HHHHHHHHHHHHHCCCCCE--EEESSCCGGGGST---TC--EECCEEC--TTCCCCTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCce--eeecCHhHHHhCC---Ce--EEECCCC--CCCCCCCCCCCcceEHHHHHHHHHHHHHHH
Confidence 9999999999988987542 4678899998774 54 3467653 344567999999999999999999999999
Q ss_pred HHHhhhcC
Q 013395 434 HSYLVNSG 441 (444)
Q Consensus 434 ~~~~~~~~ 441 (444)
.+++.+++
T Consensus 462 ~~l~~~~~ 469 (470)
T 1lfw_A 462 YELTKDEE 469 (470)
T ss_dssp HHHHSCC-
T ss_pred HHHhcCCC
Confidence 99997653
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=7.3e-32 Score=254.78 Aligned_cols=250 Identities=15% Similarity=0.162 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceecc--CCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcc
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~--~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~ 137 (444)
+++++++++++++||.+++|.++++||+++|+++|++++.. .+++|+++++++ ++|+|+|+||+||||+++.++|++
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECS-SSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCC-CCCeEEEEccccccCCCCcccCCC
Confidence 56788899999999999999999999999999999998743 256899999954 368999999999999988778988
Q ss_pred cC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhccc--ccccceeEE
Q 013395 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGV--LENVEAIFG 206 (444)
Q Consensus 138 ~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~--~~~~d~~~~ 206 (444)
+| +++|++||||+ |++++++|+|++.|++.+..++++|.|+|+++||.|+ |++.+++... ..++|++++
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 77 56899999996 8999999999999998887889999999999999985 9998887532 235788887
Q ss_pred ecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeec
Q 013395 207 LHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING 286 (444)
Q Consensus 207 ~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~g 286 (444)
.++......+. .+.+..+|.
T Consensus 165 ~ept~~~~~~~-------------~i~~g~~G~----------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGD-------------VVKNGRRGG----------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTS-------------EEEECCGGG-----------------------------------------------
T ss_pred eCCCCCccCCc-------------eeEEecCCC-----------------------------------------------
Confidence 65332211110 011111111
Q ss_pred CcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHh
Q 013395 287 GSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL 366 (444)
Q Consensus 287 G~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 366 (444)
|...+++++++.+.+++++..
T Consensus 185 -----------------------------------------------------------p~~~~~~~l~~~l~~a~~~~~ 205 (268)
T 3t68_A 185 -----------------------------------------------------------GFLTDTGELLAAVVAAVEEVN 205 (268)
T ss_dssp -----------------------------------------------------------GTSCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------cccCCchHHHHHHHHHHHHHh
Confidence 011123459999999999866
Q ss_pred CCcccccCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 367 GEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 367 g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
|.++.. ...+|++|++.+.+..|. ...+|+.. ...|+++|+++++++.++++++..++.++|+
T Consensus 206 gi~~~~--~~sgggtD~~~~~~~g~p-~~~~~~~~------~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 206 HQAPAL--LTTGGTSDGRFIAQMGAQ-VVELGPVN------ATIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp SSCCEE--ESSCCCHHHHHHHHHTCE-EEECCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcEE--ecCccccHHHHHHhcCCC-EEEEeeCC------CCCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 887643 456789999999886432 23456543 3479999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.97 E-value=5.7e-31 Score=248.75 Aligned_cols=250 Identities=18% Similarity=0.230 Sum_probs=191.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC--CCceEEEEeCCCCCcEEEEEeccCccCCcCCCCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQELVEW 135 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~--~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w 135 (444)
+++++++++++++++||++++|.++++||+++|+++|++++... .++|+++++++ ++|+|+|+||+||||+++.++|
T Consensus 4 ~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w 82 (269)
T 4h2k_A 4 MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQW 82 (269)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSCEEEEEEECCBCCCCCGGGC
T ss_pred hHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCC-CCCEEEEEeeecccCCCCcccc
Confidence 56788999999999999999999999999999999999987543 57899999954 4689999999999999887789
Q ss_pred cccC----cCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--Chhhhhhccc--cccccee
Q 013395 136 EHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGV--LENVEAI 204 (444)
Q Consensus 136 ~~~p----~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~--~~~~d~~ 204 (444)
+++| +++|++||||+ |++++++|+|++.|++.+..++++|.|+|+++||.|+ |++.+++... ..++|++
T Consensus 83 ~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~ 162 (269)
T 4h2k_A 83 SSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYC 162 (269)
T ss_dssp SSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEE
T ss_pred cCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEE
Confidence 8887 45899999996 7999999999999998887889999999999999985 9999886522 2356777
Q ss_pred EEecccCCCCCc-eeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEE
Q 013395 205 FGLHLVHKYPTG-VVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAM 283 (444)
Q Consensus 205 ~~~~~~~~~~~g-~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~ 283 (444)
++.++......+ .+. . ..+|.
T Consensus 163 i~~Ept~~~~~~~~i~--~--g~~G~------------------------------------------------------ 184 (269)
T 4h2k_A 163 MVGEPSSAKNLGDVVK--N--GRRGG------------------------------------------------------ 184 (269)
T ss_dssp EECCCCBSSSTTSEEE--C--SCTTC------------------------------------------------------
T ss_pred EEECCCCCCcCCceeE--E--ecccc------------------------------------------------------
Confidence 766432211111 110 0 00111
Q ss_pred eecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHH
Q 013395 284 INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTA 363 (444)
Q Consensus 284 i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 363 (444)
| + ...++++++.+.++++
T Consensus 185 ----------------------------------------------G------~----------~~~~~~l~~~l~~aa~ 202 (269)
T 4h2k_A 185 ----------------------------------------------G------F----------LTKPGKLLDSITSAIE 202 (269)
T ss_dssp ----------------------------------------------C----------------------HHHHHHHHHHH
T ss_pred ----------------------------------------------c------c----------cCCCcHHHHHHHHHHH
Confidence 0 0 0113568999999999
Q ss_pred HHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 364 EILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 364 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
+..|.++.. ...+|++|++.+... +|++ .+++.. ..+|+++|+++++++.++++++..++.+++.
T Consensus 203 ~~~gi~~~~--~~~gggtDa~~~~~~g~p~~--~~~~~~------~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 203 ETIGITPKA--ETGGGTSDGRFIALMGAEVV--EFGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp HHHSCCCEE--ECC--CHHHHHHHTTTCEEE--ECCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred HHhCCCCEE--ecCCCCchHHHHHhhCCCEE--EEEeCC------CCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 866887654 467799999998865 4433 356543 4589999999999999999999999998875
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.93 E-value=6.1e-26 Score=204.23 Aligned_cols=172 Identities=19% Similarity=0.173 Sum_probs=132.8
Q ss_pred HHHHHHHHHHhcCCCCCc--chHHHHHHHHHHHHHcCCceeccC---CCceEEEEe-CCCC-CcEEEEEeccCccCCcCC
Q 013395 60 NWMKKMRRQIHENPELAY--EEFETSELIRRELDQLGIAYRWPV---AKTGVVATV-GSGS-PPFVALRADMDALPIQEL 132 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~--~e~~~~~~i~~~l~~~g~~~~~~~---~~~n~~~~~-~~~~-~~~ill~~H~D~vp~~~~ 132 (444)
+++++++++++++||+++ +|.++++|++++|+++|++++... +.+|+++++ ++++ +|+|+|+||+||||+++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 567788999999999988 688999999999999999987543 567999999 5443 58999999999999865
Q ss_pred CCCcccCc-----CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC--CChhhhhhcccccccc
Q 013395 133 VEWEHKSK-----IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVLENVE 202 (444)
Q Consensus 133 ~~w~~~p~-----~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~~~~d 202 (444)
+.|.++|. +||++||||+ |++++++|+|+++|++.+..++++|.|+|+++||.| .|++.++++..++..+
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 36987773 5899999994 899999999999999988889999999999999997 4999998764433333
Q ss_pred eeEEecccCCCCCceeeeccCcccccceeEEE
Q 013395 203 AIFGLHLVHKYPTGVVASRPGDFLAGCGSFKA 234 (444)
Q Consensus 203 ~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i 234 (444)
..++++....+|++..... ..++|..+++|
T Consensus 169 ~~~~id~g~~ept~~~~v~--~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFALDEGIANPTDAFTVF--YSERSPWWVRV 198 (198)
T ss_dssp EEEEEECCCCCSSSSEEEE--ECCSSCGGGCC
T ss_pred cCEEEecCccCCCCCceEE--EEccEEEEEEC
Confidence 3333332234565532211 23457776653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.91 E-value=2.2e-24 Score=210.50 Aligned_cols=249 Identities=12% Similarity=0.100 Sum_probs=162.6
Q ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCC-CCcEEEEEeccCccCCc-------------
Q 013395 65 MRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSG-SPPFVALRADMDALPIQ------------- 130 (444)
Q Consensus 65 l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~-~~~~ill~~H~D~vp~~------------- 130 (444)
++++++++||++++|.++++|++++|+++|++++.+ ..+|+++.+.++ ++|+|+|.||+|+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 478899999999999999999999999999998764 467999998433 45899999999999830
Q ss_pred CCCCCcccC---------------------------------------------------cC-C-------------Ccc
Q 013395 131 ELVEWEHKS---------------------------------------------------KI-D-------------GKM 145 (444)
Q Consensus 131 ~~~~w~~~p---------------------------------------------------~~-~-------------g~i 145 (444)
...+|..+| ++ | |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 011465443 11 4 899
Q ss_pred ccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCCCCceeeecc
Q 013395 146 HACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRP 222 (444)
Q Consensus 146 ~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~ 222 (444)
|||.. |++++++|.|++.|+ +++++|.|+|+.+||.|+ |++.+.+. . ..|++++.++.. .
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~-~--~~~~~i~~d~~~-----~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ-L--KPTCAIVVETTT-----A----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH-H--CCSEEEEEEEEE-----E-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc-c--CCCEEEEEeccc-----C-----
Confidence 99953 899999999999986 478999999999999984 88888763 1 456666543210 0
Q ss_pred CcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEE
Q 013395 223 GDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGT 302 (444)
Q Consensus 223 g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~d 302 (444)
+ ++.|++.|++.|..|.|++..+ .+ .+..
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~--------------~~-------------~~~~------------- 253 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF--------------YH-------------RGYV------------- 253 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS--------------CC-------------SSSC-------------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE--------------eC-------------CCCC-------------
Confidence 1 4567788988898888864110 00 0000
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcH
Q 013395 303 FRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSED 382 (444)
Q Consensus 303 iR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD 382 (444)
.++.+.+.+++++++. |.+... ....+++||
T Consensus 254 -----------------------------------------------~~~~l~~~l~~~a~~~-gi~~~~-~~~~~ggtD 284 (340)
T 2fvg_A 254 -----------------------------------------------IPKEIFQTIVDTAKNN-DIPFQM-KRRTAGGTD 284 (340)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHHHHT-TCCCEE-CCCC-----
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHHc-CCCeEE-EecCCCCcc
Confidence 0111333333333332 433221 124678899
Q ss_pred HHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 383 FAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 383 ~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
++.+.. .+|++.++.|. ..+|+++|+++++++..+++++..++.+++..
T Consensus 285 a~~~~~~~~GiP~v~~g~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~~ 336 (340)
T 2fvg_A 285 AGRYARTAYGVPAGVISTPA--------RYIHSPNSIIDLNDYENTKKLIKVLVEEGKIV 336 (340)
T ss_dssp --------CCSCEEEEEEEE--------EESSTTCEEEEHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHhhCCCCcEEEecccc--------cccCChhhcccHHHHHHHHHHHHHHHHhcccc
Confidence 998875 48877554332 23999999999999999999999999988763
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.88 E-value=1.9e-21 Score=191.94 Aligned_cols=256 Identities=13% Similarity=0.136 Sum_probs=179.2
Q ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCCCCcEEEEEeccCccCC---------
Q 013395 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADMDALPI--------- 129 (444)
Q Consensus 60 ~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~~~~~ill~~H~D~vp~--------- 129 (444)
+++++++++++++||+|++|.++++||+++|+++|++++.+ ..+|+++++ +++.+|+|+|.||+|+||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 45778899999999999999999999999999999998754 577999988 5434689999999999982
Q ss_pred ------------------------cCC--C---CCcccC--------------------------------c--------
Q 013395 130 ------------------------QEL--V---EWEHKS--------------------------------K-------- 140 (444)
Q Consensus 130 ------------------------~~~--~---~w~~~p--------------------------------~-------- 140 (444)
.+. . .|..+. +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 110 0 132110 0
Q ss_pred --------CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecc
Q 013395 141 --------IDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHL 209 (444)
Q Consensus 141 --------~~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~ 209 (444)
++|++|||+. |++++++|.|++.|++.+ ++++|.|+|+++||.|+ |++.+... . ..|+++++++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~-~--~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT-I--QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc-c--CCCEEEEEec
Confidence 1689999975 899999999999998764 67999999999999985 88877532 2 4577766543
Q ss_pred cCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcc
Q 013395 210 VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSS 289 (444)
Q Consensus 210 ~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~ 289 (444)
... +. .+ |. .|+.+. ..++ .|
T Consensus 241 ~~~---~~---~~-----g~---------------~~~~~~---------------------~~lg----------~G-- 261 (373)
T 1vhe_A 241 GIA---GD---TP-----GI---------------SEKEAQ---------------------SKMG----------KG-- 261 (373)
T ss_dssp EEC---CC---ST-----TC---------------CTTTCC---------------------CCTT----------SC--
T ss_pred ccc---CC---CC-----CC---------------cccccc---------------------cccC----------CC--
Confidence 211 00 01 11 111100 0000 01
Q ss_pred cccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCc
Q 013395 290 YNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEE 369 (444)
Q Consensus 290 ~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~ 369 (444)
| .+.+.. . ....++++++.+++++++. |.+
T Consensus 262 ----~---------------------------------------~i~~~~---~---~~~~~~~l~~~l~~~a~~~-gi~ 291 (373)
T 1vhe_A 262 ----P---------------------------------------QIIVYD---A---SMVSHKGLRDAVVATAEEA-GIP 291 (373)
T ss_dssp ----C---------------------------------------EEEEEE---T---TEECCHHHHHHHHHHHHHH-TCC
T ss_pred ----c---------------------------------------eEEEeC---C---CCCCCHHHHHHHHHHHHHc-CCC
Confidence 0 011110 1 2356788999999999887 776
Q ss_pred ccccCCCCCcCcHHHHH--HH-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 370 NVKLAPIFTGSEDFAFF--LD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 370 ~~~~~~~~~g~tD~~~~--~~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
+... ...+++||++.+ .. .+|++.++.|. ..+|+++|+++++++..++++++.++.+++.+
T Consensus 292 ~~~~-~~~~ggtDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 292 YQFD-AIAGGGTDSGAIHLTANGVPALSITIAT--------RYIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp CEEE-EETTCCCTHHHHTTSTTCCCEEEEEEEE--------BSTTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred eEEe-cCCCCCccHHHHHHhCCCCcEEEEcccc--------ccCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 4321 235688999999 44 48987654432 34899999999999999999999999987653
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.87 E-value=6.3e-22 Score=192.55 Aligned_cols=239 Identities=21% Similarity=0.195 Sum_probs=172.7
Q ss_pred HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccC-------------
Q 013395 62 MKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALP------------- 128 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp------------- 128 (444)
+++++++++++||++++|.++++|++++|+++|+ ++. +..+|+++.++++ .|+|+|.||+|+|+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 5678999999999999999999999999999999 654 5688999998433 58999999999994
Q ss_pred ---CcCCCCCcc--------------------------------------------------------------------
Q 013395 129 ---IQELVEWEH-------------------------------------------------------------------- 137 (444)
Q Consensus 129 ---~~~~~~w~~-------------------------------------------------------------------- 137 (444)
.+. |..
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 432 211
Q ss_pred --cCcCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCC
Q 013395 138 --KSKIDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHK 212 (444)
Q Consensus 138 --~p~~~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~ 212 (444)
....+|++|||.. |++++++|+|++.|++.+ ++++|.|+|+++||.|+ |++.+.+. ...|+++++++...
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~~~~ 232 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH---YYPQYAFAIDSFAC 232 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT---CCCSEEEEECCEEC
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc---cCCCEEEEEecccc
Confidence 0125789999953 899999999999998764 67999999999999995 88887642 24677776532111
Q ss_pred CCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCccccc
Q 013395 213 YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNM 292 (444)
Q Consensus 213 ~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nv 292 (444)
. ..+ | | .+ .++. |..
T Consensus 233 ~------~~p-----~---------~------~~--------------------------~lg~----------G~~--- 247 (332)
T 2wyr_A 233 C------SPL-----T---------G------DV--------------------------KLGK----------GPV--- 247 (332)
T ss_dssp C------SGG-----G---------T------TC--------------------------CTTS----------CCE---
T ss_pred c------CCC-----C---------C------ce--------------------------eeCC----------CCE---
Confidence 0 001 1 0 00 0000 100
Q ss_pred ccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccc
Q 013395 293 IPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVK 372 (444)
Q Consensus 293 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~ 372 (444)
+.+.. . ..+.++++++.+.+++++. |.++..
T Consensus 248 ------------------------------------------i~~~d---~---~~~~~~~l~~~l~~~~~~~-gi~~~~ 278 (332)
T 2wyr_A 248 ------------------------------------------IRAVD---N---SAIYSRDLARKVWSIAEKN-GIEIQI 278 (332)
T ss_dssp ------------------------------------------EEEEC---S---SCBCCHHHHHHHHHHHHHT-TCCCEE
T ss_pred ------------------------------------------EEEcC---C---CCCCCHHHHHHHHHHHHHc-CCCeEE
Confidence 11110 0 2456788999999999886 876533
Q ss_pred cCCCCCcCcHHHHHHHHcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013395 373 LAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 435 (444)
Q Consensus 373 ~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~ 435 (444)
...+++||++.+...+|++.+ |+.. ..+|+++|+++++++.+++++++.++.+
T Consensus 279 --~~~~ggtDa~~~~~GiPtv~l--g~~~------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 279 --GVTGGGTDASAFQDRSKTLAL--SVPI------KYLHSEVETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp --EECSSCCGGGGGTTTSEEEEE--ECEE------BSCSSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred --ecCCCCchHHHHHcCCCEEEE--cCCc------CCCCChhhcccHHHHHHHHHHHHHHHHh
Confidence 345688999888777887654 4322 3499999999999999999999998865
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.86 E-value=1.2e-24 Score=211.10 Aligned_cols=322 Identities=11% Similarity=0.016 Sum_probs=174.8
Q ss_pred HHHHHHhcCCCCCcchH-HHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccCcCC
Q 013395 64 KMRRQIHENPELAYEEF-ETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKID 142 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~-~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~ 142 (444)
+++++|+++||+|++|. ++++||+++|+++|++++.+ ..+||+++++++ +|+|+|.||+||||.....- .++
T Consensus 13 elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~~ 85 (354)
T 2wzn_A 13 KLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DKD 85 (354)
T ss_dssp HHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CTT
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCee-----ecC
Confidence 67889999999999885 68999999999999998754 577999999654 68999999999998643211 235
Q ss_pred CccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceee
Q 013395 143 GKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVA 219 (444)
Q Consensus 143 g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~ 219 (444)
|++++++. +.+.++...++..+.+.+ .+...+.+++..+||.+ .|.+.+............... .....+..
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~- 160 (354)
T 2wzn_A 86 GYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKE---EAEEMGFR- 160 (354)
T ss_dssp SCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHH---HHHHTTCC-
T ss_pred CceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchh---hhhccccc-
Confidence 66666553 233333333333333333 34566778888999877 465555443222111111100 00001110
Q ss_pred eccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEE-Eee-----cCcccccc
Q 013395 220 SRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA-MIN-----GGSSYNMI 293 (444)
Q Consensus 220 ~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~-~i~-----gG~~~nvi 293 (444)
....+.....+.+.+.+.|++.+.. +...+..++..++.+.... ........ ... ++...|.+
T Consensus 161 ----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 229 (354)
T 2wzn_A 161 ----VGTVGEFAPNFTRLNEHRFATPYLD---DRICLYAMIEAARQLGDHE----ADIYIVGSVQEEVGLRGARVASYAI 229 (354)
T ss_dssp ----TTCEEEECCCCEECSSSEEECTTHH---HHHHHHHHHHHHHHCCCCS----SEEEEEEESCGGGTSHHHHHHHHHH
T ss_pred ----cceeeeeeeeeEeeccccccccccc---ccchhhhHHHHHHHHHhcc----ccccccccceeeeeeeccccccccc
Confidence 0112344455666777777776544 4444444444444432111 00111111 111 22456667
Q ss_pred cCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCccccc
Q 013395 294 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL 373 (444)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~ 373 (444)
+..+....+.+......... ......+....... ....++............ .+....+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~ 289 (354)
T 2wzn_A 230 NPEVGIAMDVTFAKQPHDKG----------KIVPELGKGPVMDV---------GPNINPKLRAFADEVAKK-YEIPLQVE 289 (354)
T ss_dssp CCSEEEEEEEEECCCTTSTT----------CCCCCTTSCCEEEE---------STTSCHHHHHHHHHHHHH-TTCCCEEE
T ss_pred ccccceeeeeeeccccchhh----------hhheeecccccccc---------ccccCcchhhhhHHHHHH-hcCCCceE
Confidence 77777777776554332110 00000111111111 111223322222222222 13332233
Q ss_pred CCCCCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 374 APIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 374 ~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
....+|+||++++.. .+|++.++.|. ..+|++||+|+++++.+++++|..++.++
T Consensus 290 ~~~~~ggTDa~~~~~~~~Giptv~~G~g~--------~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L 347 (354)
T 2wzn_A 290 PSPRPTGTDANVMQINKEGVATAVLSIPI--------RYMHSQVELADARDVDNTIKLAKALLEEL 347 (354)
T ss_dssp ECCSCCSSHHHHHHTSTTCCEEEEEEEEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred EEecccccHHHHHHHhcCCCCEEEECccc--------CCCCcccEEEEHHHHHHHHHHHHHHHHhC
Confidence 467789999998753 38877654432 34899999999999999999999999876
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.85 E-value=1.5e-20 Score=183.99 Aligned_cols=241 Identities=15% Similarity=0.141 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCC-CCcEEEEEeccCcc----------
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSG-SPPFVALRADMDAL---------- 127 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~-~~~~ill~~H~D~v---------- 127 (444)
.+++++++++++++||++++|.++++|++++|+++|++++.+ ..+|+++++++. ++|+|+|+||+|||
T Consensus 5 ~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~ 83 (349)
T 2gre_A 5 TKETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPD 83 (349)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCC
Confidence 367888899999999999999999999999999999998754 577999999433 45899999999999
Q ss_pred ------CCcCCCCCcccC--------------------------------------------------------------
Q 013395 128 ------PIQELVEWEHKS-------------------------------------------------------------- 139 (444)
Q Consensus 128 ------p~~~~~~w~~~p-------------------------------------------------------------- 139 (444)
|.+ +|..++
T Consensus 84 G~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi 160 (349)
T 2gre_A 84 GRLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI 160 (349)
T ss_dssp SCEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTC
T ss_pred CeEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCC
Confidence 333 232211
Q ss_pred --------------cCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccc
Q 013395 140 --------------KIDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVE 202 (444)
Q Consensus 140 --------------~~~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d 202 (444)
..+|++|||+. |++++++|.|++.|++.+..++++|.|+|+++||.| .|++.+ . .++|
T Consensus 161 ~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~-~----~~~~ 235 (349)
T 2gre_A 161 EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI-P----EETV 235 (349)
T ss_dssp CTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC-C----TTEE
T ss_pred CCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc-c----cCCC
Confidence 13478999874 899999999999999888778899999999999999 488765 1 2456
Q ss_pred eeEEecccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEE
Q 013395 203 AIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA 282 (444)
Q Consensus 203 ~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~ 282 (444)
+++.++. ... +. |-..++. +.+
T Consensus 236 ~~i~~D~--~~~-------------~~------------~p~~~~~---------------------------g~~---- 257 (349)
T 2gre_A 236 EYLAVDM--GAL-------------GD------------GQASDEY---------------------------TVS---- 257 (349)
T ss_dssp EEEEECC--CCC-------------SC------------C--CCTT---------------------------SEE----
T ss_pred EEEEEec--ccc-------------cC------------CCCCCCC---------------------------ceE----
Confidence 6665532 110 00 0000000 000
Q ss_pred EeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHH
Q 013395 283 MINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVT 362 (444)
Q Consensus 283 ~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 362 (444)
+.... .. .+.++.+.+.+++++
T Consensus 258 ----------------------------------------------------i~~~~---~~---~~~~~~l~~~l~~~a 279 (349)
T 2gre_A 258 ----------------------------------------------------ICAKD---SS---GPYHYALRKHLVELA 279 (349)
T ss_dssp ----------------------------------------------------EEEEE---TT---EECCHHHHHHHHHHH
T ss_pred ----------------------------------------------------EEEcc---CC---CCCCHHHHHHHHHHH
Confidence 00000 00 124677888888888
Q ss_pred HHHhCCcccccCCCCCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013395 363 AEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 435 (444)
Q Consensus 363 ~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~ 435 (444)
++. |.+.... ...+|++|++.+.. .+|++.++.+. ...|+ .|+++++++..++++++.++.+
T Consensus 280 ~~~-gi~~q~~-~~~ggGsDa~~~~~~~~GiPt~~lg~~~--------~~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 280 KTN-HIEYKVD-IYPYYGSDASAAIRAGFDVKHALIGAGI--------DSSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp HHH-TCCEEEE-ECSCC--------CCSSSCEEEEEEECC--------BSTTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred HHc-CCCcEEe-ccCCCCccHHHHHHhCCCCcEEEeccCc--------ccccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 876 7764321 23578899888854 48877554433 34999 9999999999999999988764
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.84 E-value=2.4e-20 Score=182.88 Aligned_cols=247 Identities=15% Similarity=0.149 Sum_probs=172.9
Q ss_pred HHHHHHHHhcCCCCCcch-HHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccC------------
Q 013395 62 MKKMRRQIHENPELAYEE-FETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALP------------ 128 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~e-~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp------------ 128 (444)
+++++++++++||++++| .++++|++++|+++|++++.+ ...|+++.++++ +|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 457799999999999999 999999999999999998754 578999998543 58999999999995
Q ss_pred ----CcCCCCCccc-------------------------C----------------------------------------
Q 013395 129 ----IQELVEWEHK-------------------------S---------------------------------------- 139 (444)
Q Consensus 129 ----~~~~~~w~~~-------------------------p---------------------------------------- 139 (444)
.+. |... +
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 1110 0
Q ss_pred --------cCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEec
Q 013395 140 --------KIDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 140 --------~~~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~ 208 (444)
..++++|||.. |++++++|.+++.|++ ++++|.|+|+.+||.|+ |++.+... ...|++++++
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~---~~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG---IEPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc---cCCCEEEEEe
Confidence 01457888853 8999999999999875 68999999999999985 88877532 1456666654
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecC
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG 287 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p-~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG 287 (444)
+.... .|.+.+ +.+ ... +.+|
T Consensus 236 ~~~~~---------------------------~~p~~~~~~g---------------------~~~----------lg~G 257 (353)
T 1y0y_A 236 VTIAA---------------------------DIPGTPEHKQ---------------------VTH----------LGKG 257 (353)
T ss_dssp EEECC---------------------------CSTTCCGGGC---------------------CCC----------TTSC
T ss_pred ccccc---------------------------CCCCCccccC---------------------ccc----------cCCC
Confidence 22110 011100 000 000 1122
Q ss_pred cccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhC
Q 013395 288 SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILG 367 (444)
Q Consensus 288 ~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g 367 (444)
.. +.+.. . ....++++++.+++++++. |
T Consensus 258 ~~---------------------------------------------i~~~d---~---~~~~~~~l~~~l~~~a~~~-g 285 (353)
T 1y0y_A 258 TA---------------------------------------------IKIMD---R---SVICHPTIVRWLEELAKKH-E 285 (353)
T ss_dssp EE---------------------------------------------EEEEE---T---TEECCHHHHHHHHHHHHHT-T
T ss_pred cE---------------------------------------------EEEeC---C---CCCCCHHHHHHHHHHHHHc-C
Confidence 00 11100 1 2456788999999999887 7
Q ss_pred CcccccCCCCCcCcHHHHH--HH-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhh
Q 013395 368 EENVKLAPIFTGSEDFAFF--LD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 439 (444)
Q Consensus 368 ~~~~~~~~~~~g~tD~~~~--~~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~ 439 (444)
.++... ...++++|++.+ .. .+|++.++.|. ..+|+++|+++++++..++++++.++.++..+
T Consensus 286 i~~~~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 351 (353)
T 1y0y_A 286 IPYQLE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--------RYIHSNTEVVDERDVDATVELMTKALENIHEL 351 (353)
T ss_dssp CCEEEE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--------BSCSSSCEEEEHHHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEe-ecCCCCchHHHHHHhCCCCcEEEEcccc--------cccCCHHHhcCHHHHHHHHHHHHHHHHhhhhc
Confidence 764321 246788999999 44 48987654432 34999999999999999999999999987653
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=1.1e-19 Score=177.64 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=164.3
Q ss_pred HHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCCc----------
Q 013395 61 WMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQ---------- 130 (444)
Q Consensus 61 ~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~~---------- 130 (444)
++++++++++++||++++|.++++|++++|+++|++++. +..+|+++.+.++..|.|+|.||+|+|+..
T Consensus 6 ~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l~ 84 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKT-TRHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFAR 84 (346)
T ss_dssp CHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEE-CTTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEEE
T ss_pred HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEE-ecCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeEE
Confidence 456789999999999999999999999999999999875 457799999843335899999999999520
Q ss_pred --CCCCCcccC-----------------------------------------------------------------cCCC
Q 013395 131 --ELVEWEHKS-----------------------------------------------------------------KIDG 143 (444)
Q Consensus 131 --~~~~w~~~p-----------------------------------------------------------------~~~g 143 (444)
....|...+ ..+|
T Consensus 85 ~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~ 164 (346)
T 1vho_A 85 LEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNG 164 (346)
T ss_dssp EEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETT
T ss_pred EEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcC
Confidence 001232110 0125
Q ss_pred ccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhhhcccccccceeEEecccCCCCCceeee
Q 013395 144 KMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVAS 220 (444)
Q Consensus 144 ~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~ 220 (444)
+++||+. |+++++++.+++.+++.+ +++++.++|+.+||.| .|+...... . ..|.++.++
T Consensus 165 ~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D------------ 227 (346)
T 1vho_A 165 KVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAYE-I--NPDAAIVMD------------ 227 (346)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTCC-C--CCSEEEEEE------------
T ss_pred eEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhcc-c--CCCEEEEee------------
Confidence 6888876 799999999999997654 6689999999999998 466543211 1 223333221
Q ss_pred ccCcccccceeEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEE
Q 013395 221 RPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATV 299 (444)
Q Consensus 221 ~~g~~~~G~~~~~i~v~G~~~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~ 299 (444)
+. |++ .|. .+ . . .+. +
T Consensus 228 ---------------~~----~~~~~~~--~~--~-----------~------~~~----------~------------- 244 (346)
T 1vho_A 228 ---------------VT----FASEPPF--SD--H-----------I------ELG----------K------------- 244 (346)
T ss_dssp ---------------EE----CCCCTTS--CC--C-----------C------CTT----------S-------------
T ss_pred ---------------cc----cccCCCC--Cc--c-----------c------ccC----------C-------------
Confidence 11 111 110 00 0 0 000 0
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCC-C
Q 013395 300 AGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIF-T 378 (444)
Q Consensus 300 ~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~-~ 378 (444)
| ..+++ ....++++++.+++++++. |.++.. ... +
T Consensus 245 ------------------------------g--~~i~~---------~~~~~~~l~~~~~~~a~~~-gi~~~~--~~~~g 280 (346)
T 1vho_A 245 ------------------------------G--PVIGL---------GPVVDRNLVQKIIEIAKKH-NVSLQE--EAVGG 280 (346)
T ss_dssp ------------------------------C--CEEEC---------STTSCHHHHHHHHHHHHHT-TCCCEE--ESSCC
T ss_pred ------------------------------C--ceEEe---------CCcCCHHHHHHHHHHHHHC-CCCEEE--EeCCC
Confidence 1 11221 2356888999999999986 877543 233 4
Q ss_pred -cCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhhhcC
Q 013395 379 -GSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 379 -g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~~~~ 441 (444)
|++|++.+.. .+|++.++.|. ..+|+++|+++++++..+++++..++.+++.+-+
T Consensus 281 ~ggsDa~~~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~~~ 339 (346)
T 1vho_A 281 RSGTETDFVQLVRNGVRTSLISIPL--------KYMHTPVEMVDPRDVEELARLLSLVAVELEVEGG 339 (346)
T ss_dssp C----CTTHHHHHTTCEEEEEEEEC--------BSTTSTTEEECHHHHHHHHHHHHHHHHHCC----
T ss_pred CCCchHHHHHHhCCCCcEEEEehhh--------cccccHHHhcCHHHHHHHHHHHHHHHHHhhhhcC
Confidence 8899999865 48887655543 2399999999999999999999999998877543
No 38
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.79 E-value=3.8e-18 Score=166.96 Aligned_cols=250 Identities=16% Similarity=0.140 Sum_probs=169.3
Q ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCC--------c-----
Q 013395 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI--------Q----- 130 (444)
Q Consensus 64 ~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~--------~----- 130 (444)
+++++++++||++++|.++++|++++|+++|++++. +..+|+++.+.+...|+|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~-d~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEE-CTTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-ecCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 578899999999999999999999999999999874 45679999984334589999999999951 0
Q ss_pred CCCCCccc---------------------------------------------------------------CcCCCcccc
Q 013395 131 ELVEWEHK---------------------------------------------------------------SKIDGKMHA 147 (444)
Q Consensus 131 ~~~~w~~~---------------------------------------------------------------p~~~g~i~g 147 (444)
....|... ...+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 00011100 014678899
Q ss_pred Ccc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEecccCCCCCceeeeccCc
Q 013395 148 CGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGD 224 (444)
Q Consensus 148 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~ 224 (444)
|++ |+++++++.+++.+++.+ ++.++.++|+.+||.|+ |+...... . ..|+++.++....
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D~~~~------------ 228 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDTACW------------ 228 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH-H--CCSEEEEECCCCC------------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc-c--CCCEEEEEecccc------------
Confidence 886 799999999999987653 67899999999999985 76554322 1 3355554421100
Q ss_pred ccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEe
Q 013395 225 FLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFR 304 (444)
Q Consensus 225 ~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR 304 (444)
...|. .+. .. ...+ ..|
T Consensus 229 ------------------~~~~~--~~~-----------~~-----~~~~----------~~G----------------- 245 (348)
T 1ylo_A 229 ------------------AKNFD--YGA-----------AN-----HRQI----------GNG----------------- 245 (348)
T ss_dssp ------------------SSTTC--CST-----------TC-----CCCT----------TSC-----------------
T ss_pred ------------------CCCCC--CCc-----------cc-----cccC----------CCC-----------------
Confidence 00111 110 00 0000 001
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHH
Q 013395 305 AFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFA 384 (444)
Q Consensus 305 ~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 384 (444)
+.+.+.. . ..+.++.+.+.+++++++. |.+.... ...+|++|++
T Consensus 246 ----------------------------~~i~~~~---~---~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~~ggsDa~ 289 (348)
T 1ylo_A 246 ----------------------------PMLVLSD---K---SLIAPPKLTAWIETVAAEI-GVPLQAD-MFSNGGTDGG 289 (348)
T ss_dssp ----------------------------CEEEEEC---S---SCBCCHHHHHHHHHHHHHH-TCCCEEE-ECSSCCCHHH
T ss_pred ----------------------------cEEEEeC---C---CCCCCHHHHHHHHHHHHHc-CCCeEEe-ecCCCcchHH
Confidence 0012211 1 2346788999999999886 8765331 3367899999
Q ss_pred HHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhh
Q 013395 385 FFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 438 (444)
Q Consensus 385 ~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~~~ 438 (444)
.+.. .+|++.+ |+.. ..+|+++|+++++++..+++++..++.++..
T Consensus 290 ~~~~~~~gipt~~l--g~~~------~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 290 AVHLTGTGVPTLVM--GPAT------RHGHCAASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp HHHTSTTCCCEEEE--ECCC------BSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHHhcCCCCEEEE--Cccc------CcCCCcceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 9864 3887654 4422 3499999999999999999999999987654
No 39
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.77 E-value=7.3e-19 Score=169.76 Aligned_cols=238 Identities=11% Similarity=0.018 Sum_probs=163.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC------CCceEEEEeCCCCCcEEEEEeccCccC---
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTGVVATVGSGSPPFVALRADMDALP--- 128 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~------~~~n~~~~~~~~~~~~ill~~H~D~vp--- 128 (444)
..+++++++++++++||++++|.++++|++++|+++|++++.+. +.+|+++.+++ . |+|+|.||+|||+
T Consensus 15 ~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v 92 (321)
T 3cpx_A 15 LYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTV 92 (321)
T ss_dssp GGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEe
Confidence 44567888999999999999999999999999999999876432 16799998843 3 7899999999994
Q ss_pred --------CcCCCCCcccC------------------------------------------cCCCccccCcc--hHHHHH
Q 013395 129 --------IQELVEWEHKS------------------------------------------KIDGKMHACGH--DAHVAM 156 (444)
Q Consensus 129 --------~~~~~~w~~~p------------------------------------------~~~g~i~grG~--k~~~a~ 156 (444)
.+....|.-.+ ..+|+++||+. |+++++
T Consensus 93 ~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa 172 (321)
T 3cpx_A 93 SYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWT 172 (321)
T ss_dssp CSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHH
T ss_pred cccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHH
Confidence 32211121000 01267888875 799999
Q ss_pred HHHHHHHHHhccccCCceEEEEEecCCCCC-CChhhhh---hcccccccceeEEecccCCCCCceeeeccCcccccceeE
Q 013395 157 LLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMI---QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSF 232 (444)
Q Consensus 157 ~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~---~~~~~~~~d~~~~~~~~~~~~~g~v~~~~g~~~~G~~~~ 232 (444)
++.+++.++ . +.++|+.+||.| .|++... .+.. +.|+++.+++... +.
T Consensus 173 ~l~al~~l~------~--i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~~~~---------------~~--- 224 (321)
T 3cpx_A 173 ALELAKTLE------H--GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDITWV---------------TE--- 224 (321)
T ss_dssp HHHHTTTCC------S--EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCCEEC---------------CS---
T ss_pred HHHHHHHhc------C--cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeCccc---------------cC---
Confidence 999988754 1 889999999999 4776532 1111 3455555421100 10
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHH
Q 013395 233 KAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFN 312 (444)
Q Consensus 233 ~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~ 312 (444)
. . ... .
T Consensus 225 --------------------------------~-----~-~~~----------~-------------------------- 230 (321)
T 3cpx_A 225 --------------------------------G-----V-EAG----------K-------------------------- 230 (321)
T ss_dssp --------------------------------S-----S-CTT----------S--------------------------
T ss_pred --------------------------------C-----c-ccC----------C--------------------------
Confidence 0 0 000 0
Q ss_pred HHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHH---H
Q 013395 313 ALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---E 389 (444)
Q Consensus 313 ~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~---~ 389 (444)
.+.+.+. . ..+.++++++.+++++++. |.+.... ...+|+||++.+.. .
T Consensus 231 -------------------G~~i~~~----~---~~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~G 282 (321)
T 3cpx_A 231 -------------------GVAISMR----D---RMIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYP 282 (321)
T ss_dssp -------------------CEEEEEE----S---SSCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSC
T ss_pred -------------------CcEEEEC----C---CCCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCC
Confidence 1112322 1 1246788999999998886 7765431 23788999998854 3
Q ss_pred cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013395 390 IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 435 (444)
Q Consensus 390 ~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~ 435 (444)
+|++.+ |+.. ..+|+++|++.++++...+++++.++.+
T Consensus 283 ipt~~l--G~~~------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 283 WDWCFI--GAPE------KDAHTPNECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp CBCCBE--ECEE------BSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred CCEEEE--chhh------cccchhhhheeHHHHHHHHHHHHHHHHh
Confidence 888754 4432 3499999999999999999999999865
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.77 E-value=1.5e-17 Score=157.91 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHhcCCCCCc--------chHHHHHHHHHHHHHcCCceeccCC------CceEEEEe-CCCCCcEEEEEec
Q 013395 59 VNWMKKMRRQIHENPELAY--------EEFETSELIRRELDQLGIAYRWPVA------KTGVVATV-GSGSPPFVALRAD 123 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~--------~e~~~~~~i~~~l~~~g~~~~~~~~------~~n~~~~~-~~~~~~~ill~~H 123 (444)
.+++++++++++++|+.++ .|.++++||+++|+++|++++.+.. .+||++++ +.+++++|+|.||
T Consensus 6 ~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH 85 (284)
T 1tkj_A 6 LANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAH 85 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEee
Confidence 3567777888888887765 6789999999999999999875422 46999999 4334589999999
Q ss_pred cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcccc-
Q 013395 124 MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL- 198 (444)
Q Consensus 124 ~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~- 198 (444)
+|+||. |||+ |++++++|++++.|++.+.+++++|.|+|+++||.|. |++.++++...
T Consensus 86 ~D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~ 148 (284)
T 1tkj_A 86 LDSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSA 148 (284)
T ss_dssp CCCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHH
T ss_pred cCCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccc
Confidence 999994 4553 8999999999999999888899999999999999984 99998876321
Q ss_pred --cccceeEEe
Q 013395 199 --ENVEAIFGL 207 (444)
Q Consensus 199 --~~~d~~~~~ 207 (444)
+++++++.+
T Consensus 149 ~~~~~~~~i~~ 159 (284)
T 1tkj_A 149 DRSKLAGYLNF 159 (284)
T ss_dssp HHTTEEEEEEE
T ss_pred hhhcEEEEEEe
Confidence 234455544
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.68 E-value=2.3e-16 Score=150.87 Aligned_cols=128 Identities=17% Similarity=0.219 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHcCC--c-eeccC------CCceEEEEe-CCC-CCcEEEEEecc
Q 013395 59 VNWMKKMRRQIHENPE---LAYEEFETSELIRRELDQLGI--A-YRWPV------AKTGVVATV-GSG-SPPFVALRADM 124 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps---~s~~e~~~~~~i~~~l~~~g~--~-~~~~~------~~~n~~~~~-~~~-~~~~ill~~H~ 124 (444)
.++++++++.++++|+ .++.|.++++||+++|+++|+ + ++.+. ..+||++++ |.+ ++++|+|.||+
T Consensus 19 ~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~ 98 (299)
T 1rtq_A 19 ASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHL 98 (299)
T ss_dssp HHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEecc
Confidence 4778888999999984 466788999999999999873 3 22211 248999999 543 35889999999
Q ss_pred CccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 125 DALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 125 D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
|+||. .|.. +++||||+ |++++++|++++.|++.+.+++++|.|+|+++||.|. |++.+++.
T Consensus 99 D~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 99 DSTIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred ccCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 99982 4654 57899997 7999999999999999888899999999999999995 99988876
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.63 E-value=1.2e-14 Score=141.28 Aligned_cols=246 Identities=14% Similarity=0.075 Sum_probs=168.4
Q ss_pred HHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEe-CCC-CCcEEEEEeccCccCC-----cCC-
Q 013395 61 WMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDALPI-----QEL- 132 (444)
Q Consensus 61 ~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~-~~~-~~~~ill~~H~D~vp~-----~~~- 132 (444)
++++++++++++|++|+.|.++++|++++|+++|++++. +..+|+++++ +.+ .+|+|+|.||+|+|+. .+.
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~-D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVT-DGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEE-CTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEE-CCCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 567889999999999999999999999999999998875 4688999999 443 4699999999999863 111
Q ss_pred -------CCCccc-------------------------C-------------c---------------------------
Q 013395 133 -------VEWEHK-------------------------S-------------K--------------------------- 140 (444)
Q Consensus 133 -------~~w~~~-------------------------p-------------~--------------------------- 140 (444)
.+|... | .
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 133211 0 0
Q ss_pred --------C-CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-ChhhhhhcccccccceeEEec
Q 013395 141 --------I-DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLH 208 (444)
Q Consensus 141 --------~-~g~i~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~ 208 (444)
. ++.+.|+.- +.++++++.+++.+++. +++.++.++|+..||.|. |++..... . ..|.
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~----- 232 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEV----- 232 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSE-----
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCE-----
Confidence 0 112334443 58999999999988754 578999999999999995 66554322 1 1111
Q ss_pred ccCCCCCceeeeccCcccccceeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCcEEEEEEeecCc
Q 013395 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGS 288 (444)
Q Consensus 209 ~~~~~~~g~v~~~~g~~~~G~~~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~t~~v~~i~gG~ 288 (444)
.+++..-.+++
T Consensus 233 ---------------------------------------------------------------------~i~~D~~~a~d 243 (355)
T 3kl9_A 233 ---------------------------------------------------------------------FLAVDCSPAGD 243 (355)
T ss_dssp ---------------------------------------------------------------------EEEEEEEECCG
T ss_pred ---------------------------------------------------------------------EEEecCccCCC
Confidence 12222222222
Q ss_pred ccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCC
Q 013395 289 SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGE 368 (444)
Q Consensus 289 ~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~ 368 (444)
. |+. ....|....+.... . ....++.+.+.+.+++++. |.
T Consensus 244 ~----p~~-----------------------------~~~lg~G~~i~~~d---~---~~~~~~~l~~~l~~~a~~~-gI 283 (355)
T 3kl9_A 244 V----YGG-----------------------------QGKIGDGTLIRFYD---P---GHLLLPGMKDFLLTTAEEA-GI 283 (355)
T ss_dssp G----GTS-----------------------------SCCTTSCEEEEEEE---T---TEECCHHHHHHHHHHHHHT-TC
T ss_pred C----CCc-----------------------------ccccCCCcEEEEec---C---CCCCCHHHHHHHHHHHHHc-CC
Confidence 1 111 00112222233221 1 2346788889998888886 77
Q ss_pred cccccCCCCCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013395 369 ENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 436 (444)
Q Consensus 369 ~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~~l~~~ 436 (444)
+... ...+|+||++.+.. .+|++..+++.. ..|++.|+++++++..+++++..++.++
T Consensus 284 p~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~--------~~Hs~~E~~~~~Di~~~~~ll~~~l~~l 344 (355)
T 3kl9_A 284 KYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCAR--------YIHSHQTLYAMDDFLEAQAFLQALVKKL 344 (355)
T ss_dssp CEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEB--------SCSSSCEEEEHHHHHHHHHHHHHHHHTC
T ss_pred CEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcC--------CCCCcceEeeHHHHHHHHHHHHHHHHHh
Confidence 6543 33468999988864 388877666653 3999999999999999999999998765
No 43
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.59 E-value=1.9e-14 Score=137.58 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=99.3
Q ss_pred HHHHHHHHHHhcC---CCCCcchHHHHHHHHHHHHHcCCceeccC-----------CCceEEEEeCCCCCcEEEEEeccC
Q 013395 60 NWMKKMRRQIHEN---PELAYEEFETSELIRRELDQLGIAYRWPV-----------AKTGVVATVGSGSPPFVALRADMD 125 (444)
Q Consensus 60 ~~l~~l~~~~~~~---ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-----------~~~n~~~~~~~~~~~~ill~~H~D 125 (444)
+++.+.++.++++ +..+..+.++++||.++|+++|++++.+. ...||++++++.+.+.|++.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 4444445545443 44566789999999999999999986432 147999999544568999999999
Q ss_pred ccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--------------C
Q 013395 126 ALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--------------G 188 (444)
Q Consensus 126 ~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--------------G 188 (444)
+||.++.. +. ..++|++| +|+ ++|++++|++++.|++.+ ++++|.|+|+.+||.|. |
T Consensus 105 sv~~~~~~--p~-~~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDHD--PD-PSKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTTC--SS-GGGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCCC--cc-ccCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 99976421 11 13467777 786 689999999999999874 89999999999999874 7
Q ss_pred hhhhhhc
Q 013395 189 AKDMIQE 195 (444)
Q Consensus 189 ~~~~~~~ 195 (444)
++++++.
T Consensus 179 S~~~~~~ 185 (309)
T 3tc8_A 179 TQFWAKN 185 (309)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 7777765
No 44
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.55 E-value=5.6e-14 Score=134.35 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHcCCceeccC-------C----CceEEEEeCCCCCcEEEEEecc
Q 013395 59 VNWMKKMRRQIHENPE---LAYEEFETSELIRRELDQLGIAYRWPV-------A----KTGVVATVGSGSPPFVALRADM 124 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps---~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~----~~n~~~~~~~~~~~~ill~~H~ 124 (444)
.+++.++++.++++++ .+..+.++++||+++|+++|++++.+. + ..||++++++.+.+.|+|.+|+
T Consensus 26 ~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~ 105 (314)
T 3gux_A 26 ADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHW 105 (314)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEccc
Confidence 3566666777776654 355678999999999999999986432 1 3799999954456899999999
Q ss_pred CccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC--------------
Q 013395 125 DALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-------------- 187 (444)
Q Consensus 125 D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-------------- 187 (444)
|+||.++.. +. ...++. +++|+ ++|++++|++++.|++.+ ++++|.|++..+||.|.
T Consensus 106 Dsv~~~~~~--p~-~~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~ 179 (314)
T 3gux_A 106 DSRPYADND--PD-PKNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWC 179 (314)
T ss_dssp CCCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSC
T ss_pred cCCCcCCCC--cc-cccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccc
Confidence 999975421 11 122333 45886 799999999999999874 89999999999999874
Q ss_pred -Chhhhhhc
Q 013395 188 -GAKDMIQE 195 (444)
Q Consensus 188 -G~~~~~~~ 195 (444)
|++++++.
T Consensus 180 ~GS~~~~~~ 188 (314)
T 3gux_A 180 LGSQYWART 188 (314)
T ss_dssp HHHHHHHHS
T ss_pred hhHHHHHhC
Confidence 77888765
No 45
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.51 E-value=2.7e-13 Score=131.68 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=58.0
Q ss_pred HHHHHHHHhcCCCCCcchH-HHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCC
Q 013395 62 MKKMRRQIHENPELAYEEF-ETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI 129 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~e~-~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~ 129 (444)
+++++++++++|++|+.|. ++++|++++|+++|++++. +..+|++++++++ +|+|+|.||+|+|+.
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~-D~~GNvi~~~~g~-~~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKV-DKLGNVIAHFKGS-SPRIMVAAHMDKIGV 77 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEE-CTTCCEEEEECCS-SSEEEEECCCCBCEE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEE-cCCCeEEEEEcCC-CCEEEEEecccccce
Confidence 4678999999999999999 9999999999999998875 4688999999543 389999999999974
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.51 E-value=1.1e-13 Score=133.88 Aligned_cols=126 Identities=14% Similarity=0.230 Sum_probs=96.6
Q ss_pred HHH-HHHHHHHhcCCC-CCcchHHHHHHHHHHHHH--cCCceeccC----------CCceEEEEeCCCCCcEEEEEeccC
Q 013395 60 NWM-KKMRRQIHENPE-LAYEEFETSELIRRELDQ--LGIAYRWPV----------AKTGVVATVGSGSPPFVALRADMD 125 (444)
Q Consensus 60 ~~l-~~l~~~~~~~ps-~s~~e~~~~~~i~~~l~~--~g~~~~~~~----------~~~n~~~~~~~~~~~~ill~~H~D 125 (444)
+++ .++++.++..+. .+..+.++++||.++|++ .|++++.+. ...||++++++.+.+.|++.||+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 556 666777754333 344556899999999999 999876432 147999999544568999999999
Q ss_pred ccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhc--------cccCCceEEEEEecCCCC--------C
Q 013395 126 ALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEM--------RETLKGTVVLIFQPAEER--------G 186 (444)
Q Consensus 126 ~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~~EE~--------g 186 (444)
+||.+ .|. |++ ++|+ ++|+|++|++++.|++. +.+++++|.|+|..+||. |
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 353 444 7886 79999999999999876 347899999999999998 5
Q ss_pred C-Chhhhhhc
Q 013395 187 T-GAKDMIQE 195 (444)
Q Consensus 187 ~-G~~~~~~~ 195 (444)
. |++.+++.
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 3 99888765
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.44 E-value=4.9e-12 Score=121.94 Aligned_cols=66 Identities=24% Similarity=0.205 Sum_probs=57.8
Q ss_pred HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccCCCceEEEEeCCCCCcEEEEEeccCccCC
Q 013395 62 MKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI 129 (444)
Q Consensus 62 l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~n~~~~~~~~~~~~ill~~H~D~vp~ 129 (444)
+.+|+++++++|++|+.|.++++|++++|+++|.+++. +..+|+++.+++ ++|+|+|.||+|+|+.
T Consensus 13 ~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~-D~~Gnvi~~~g~-~~~~v~l~aHmDevG~ 78 (343)
T 3isx_A 13 MKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRI-DGLGNLIVWKGS-GEKKVILDAHIDEIGV 78 (343)
T ss_dssp CHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEE-CTTCCEEEEECC-CSSEEEEEEECCBCEE
T ss_pred HHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEECC-CCCEEEEEecccccce
Confidence 45678999999999999999999999999999988764 468899999854 4689999999999853
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.31 E-value=2.4e-11 Score=116.39 Aligned_cols=109 Identities=18% Similarity=0.203 Sum_probs=82.4
Q ss_pred CCCCCcchHHHHHHHHHHHHHcCCceeccC-----------CCceEEEEeCCCCCcEEEEEeccCccCCcCCCCCcccCc
Q 013395 72 NPELAYEEFETSELIRRELDQLGIAYRWPV-----------AKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSK 140 (444)
Q Consensus 72 ~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-----------~~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~~~p~ 140 (444)
++..|....++++||.++|+++|++++.+. ...|||+++.+...+.|++.+|||++|..+......
T Consensus 40 R~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~Ds~~~~~~~~~~~--- 116 (309)
T 4fuu_A 40 RVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWDTRPWADNDADEK--- 116 (309)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECCCCSCCTTCSSGG---
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecCCCCCCCCccccc---
Confidence 445566668899999999999999986431 135999999555568999999999998654221111
Q ss_pred CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCC
Q 013395 141 IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG 186 (444)
Q Consensus 141 ~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 186 (444)
.+.....|+ .+|+|++|++++.|.+. +++++|.|+|..+||.|
T Consensus 117 -~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 117 -NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp -GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCC
T ss_pred -cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccC
Confidence 111233565 48999999999999875 67899999999999988
No 49
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.30 E-value=1.5e-11 Score=117.98 Aligned_cols=116 Identities=20% Similarity=0.229 Sum_probs=90.3
Q ss_pred HhcCCCCCcchHHHHHHHHHHHHHc--CCceeccCC----------CceEEEEeCCCCCcEEEEEeccCccCCcCCCCCc
Q 013395 69 IHENPELAYEEFETSELIRRELDQL--GIAYRWPVA----------KTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (444)
Q Consensus 69 ~~~~ps~s~~e~~~~~~i~~~l~~~--g~~~~~~~~----------~~n~~~~~~~~~~~~ill~~H~D~vp~~~~~~w~ 136 (444)
+...+..|..+.++++||.++|+++ |++++.+.- ..||++++.+...+.|++.+|+|+|+..+
T Consensus 50 ~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~Dsv~~~~----- 124 (330)
T 3pb6_X 50 LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYDSKLFPP----- 124 (330)
T ss_dssp CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEECCCCCCCT-----
T ss_pred hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEeccCCCCCCC-----
Confidence 4445566667789999999999999 888764421 26999999544468999999999997422
Q ss_pred ccCcCCCccccCcc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCCC--------C-CChhhhhhc
Q 013395 137 HKSKIDGKMHACGH---DAHVAMLLGAAKILQEM-----RETLKGTVVLIFQPAEER--------G-TGAKDMIQE 195 (444)
Q Consensus 137 ~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~--------g-~G~~~~~~~ 195 (444)
|.-...|+ .+|++++|++++.|.+. +..++++|.|+|..+||. | .|++.+++.
T Consensus 125 ------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~ 194 (330)
T 3pb6_X 125 ------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQL 194 (330)
T ss_dssp ------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHH
T ss_pred ------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHH
Confidence 11134565 58999999999999874 357899999999999998 7 399998865
No 50
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.30 E-value=3.9e-11 Score=115.79 Aligned_cols=123 Identities=20% Similarity=0.230 Sum_probs=93.1
Q ss_pred HHHHHHHHHHh-cCCCCCcchHHHHHHHHHHHHHcCCceeccC-----------CCceEEEEeCCCCCcEEEEEeccCcc
Q 013395 60 NWMKKMRRQIH-ENPELAYEEFETSELIRRELDQLGIAYRWPV-----------AKTGVVATVGSGSPPFVALRADMDAL 127 (444)
Q Consensus 60 ~~l~~l~~~~~-~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-----------~~~n~~~~~~~~~~~~ill~~H~D~v 127 (444)
..+.++++.+. .++..|....++++||.++|+++|++++.+. ...|||+++.++..+.|++.||||++
T Consensus 38 ~~~~~~l~~il~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs~ 117 (330)
T 4fai_A 38 LHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSK 117 (330)
T ss_dssp HHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCCC
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeeccc
Confidence 55555565543 3334555568999999999999999987432 12499999955556789999999999
Q ss_pred CCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCCCCC---------Chhhh
Q 013395 128 PIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEM---RETLKGTVVLIFQPAEERGT---------GAKDM 192 (444)
Q Consensus 128 p~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~g~---------G~~~~ 192 (444)
+..+. ...|+ .+|+|++|++++.|.+. +.+++++|.|+|..+||.|. |++++
T Consensus 118 ~~~~~-------------~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~ 184 (330)
T 4fai_A 118 YMPGV-------------EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHL 184 (330)
T ss_dssp CCTTS-------------CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHH
T ss_pred ccccC-------------CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHH
Confidence 75321 13455 48999999999999753 55789999999999999882 88888
Q ss_pred hhc
Q 013395 193 IQE 195 (444)
Q Consensus 193 ~~~ 195 (444)
++.
T Consensus 185 a~~ 187 (330)
T 4fai_A 185 AKK 187 (330)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 51
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.23 E-value=5.9e-11 Score=113.88 Aligned_cols=122 Identities=22% Similarity=0.236 Sum_probs=90.3
Q ss_pred HHHHHHHHh-cCCCCCcchHHHHHHHHHHHHHcCCceeccC-----------CCceEEEEeCCCCCcEEEEEeccCccCC
Q 013395 62 MKKMRRQIH-ENPELAYEEFETSELIRRELDQLGIAYRWPV-----------AKTGVVATVGSGSPPFVALRADMDALPI 129 (444)
Q Consensus 62 l~~l~~~~~-~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-----------~~~n~~~~~~~~~~~~ill~~H~D~vp~ 129 (444)
+.++++.+. .++..|....++++||+++|+++|++++.+. ...|||+++.+.+.+.|++.||+|+.+.
T Consensus 13 ~~~~l~~il~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~~ 92 (312)
T 4f9u_A 13 FNRTLDSILVPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYF 92 (312)
T ss_dssp HHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCCC
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCCC
Confidence 334444443 2334455567899999999999999986432 1259999995555689999999999875
Q ss_pred cCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCCCC--------C-Chhhh
Q 013395 130 QELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEM-----RETLKGTVVLIFQPAEERG--------T-GAKDM 192 (444)
Q Consensus 130 ~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~g--------~-G~~~~ 192 (444)
++.. -..|+ .+|+|++|++++.|.+. +.+++++|.|+|..+||.| . |++++
T Consensus 93 ~~~~------------~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~ 160 (312)
T 4f9u_A 93 PNDP------------GFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHL 160 (312)
T ss_dssp TTCT------------TCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHH
T ss_pred CCCC------------CCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHH
Confidence 4311 13455 48999999999999753 4568999999999999987 2 78888
Q ss_pred hhc
Q 013395 193 IQE 195 (444)
Q Consensus 193 ~~~ 195 (444)
+++
T Consensus 161 a~~ 163 (312)
T 4f9u_A 161 AAK 163 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 766
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.95 E-value=7.5e-10 Score=85.12 Aligned_cols=79 Identities=15% Similarity=0.138 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Q 013395 353 RIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAA 431 (444)
Q Consensus 353 ~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~~~~~~~~ 431 (444)
++++.++++++++ |.++. +..++|+||+++|... +|++ .+||+... ...+|++||+|+++++.+++++|+.
T Consensus 2 ~~v~~l~~a~~~~-g~~~~--~~~~~g~TDar~~~~~gip~v--~fGPg~~~---~~~~H~~dE~v~i~~l~~~~~iy~~ 73 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLTLE--PEIMPAAGDNRYIRAVGVPAL--GFSPMNRT---PVLLHDHDERLHEAVFLRGVDIYTR 73 (88)
T ss_dssp HHHHHHHHHHHHT-TCCEE--EEECCSCSHHHHHHHTTCCEE--EECCCCSC---CCCTTSTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCeeE--eeeeceeCcHHHHHHcCCCEE--EECCCCCC---cccccCCCCeeEHHHHHHHHHHHHH
Confidence 5899999999998 87754 4789999999999875 7743 46775421 1469999999999999999999999
Q ss_pred HHHHHhhh
Q 013395 432 FAHSYLVN 439 (444)
Q Consensus 432 ~l~~~~~~ 439 (444)
++.++++.
T Consensus 74 ~i~~~~~~ 81 (88)
T 1q7l_B 74 LLPALASV 81 (88)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999874
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.77 E-value=1.4e-08 Score=101.98 Aligned_cols=100 Identities=26% Similarity=0.337 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHcC-Ccee------c--cCCCceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccC
Q 013395 80 FETSELIRRELDQLG-IAYR------W--PVAKTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHAC 148 (444)
Q Consensus 80 ~~~~~~i~~~l~~~g-~~~~------~--~~~~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~gr 148 (444)
.+.++.|.+.|+.-. +.+. . .....||++++ |.+ +.+.|++.+|+|+++. |+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~ 265 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GT 265 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CC
Confidence 456677777775421 3222 1 12357999999 544 4588999999999984 44
Q ss_pred cc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhcc
Q 013395 149 GH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 149 G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (444)
|+ ++|++++|++++.|++.+.+++++|.|+|..+||.|. |+++++++.
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 54 7999999999999999888899999999999999994 999998874
No 54
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.75 E-value=3e-08 Score=98.93 Aligned_cols=97 Identities=19% Similarity=0.249 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHH---H--cCCceeccC----CCceEEEEe-CCC----CCcEEEEEeccCccCCcCCCCCcccCcCCCcc
Q 013395 80 FETSELIRRELD---Q--LGIAYRWPV----AKTGVVATV-GSG----SPPFVALRADMDALPIQELVEWEHKSKIDGKM 145 (444)
Q Consensus 80 ~~~~~~i~~~l~---~--~g~~~~~~~----~~~n~~~~~-~~~----~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i 145 (444)
.+.+++|.++++ + .+++..... ...||++++ |.+ +.+.|++.+|+|+|+.
T Consensus 171 ~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~---------------- 234 (421)
T 2ek8_A 171 KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK---------------- 234 (421)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT----------------
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC----------------
Confidence 345778888883 2 122222111 157999999 532 4589999999999984
Q ss_pred ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC-Chhhhhhc
Q 013395 146 HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (444)
Q Consensus 146 ~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (444)
|+|+ ++|++++|++++.|++. .++++|.|++..+||.|. |++.++++
T Consensus 235 -g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 -APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp -CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred -CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 4554 79999999999999874 578999999999999995 99999876
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.18 E-value=3.2e-06 Score=87.83 Aligned_cols=78 Identities=19% Similarity=0.247 Sum_probs=63.9
Q ss_pred CceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhc----cccCCceEE
Q 013395 103 KTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEM----RETLKGTVV 176 (444)
Q Consensus 103 ~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~----~~~~~~~i~ 176 (444)
..||++++ |.. +.+.|++.+|+|++..+ +.+..+|++++|++++.|.+. +.+++++|+
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPG----------------AAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCC----------------TTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCC----------------CCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 56999999 552 45789999999998521 112368999999999999864 678999999
Q ss_pred EEEecCCCCCC-Chhhhhhcc
Q 013395 177 LIFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 177 ~~~~~~EE~g~-G~~~~~~~~ 196 (444)
|++..+||.|. |+..++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 99999999995 999998774
No 56
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.16 E-value=2.6e-06 Score=89.36 Aligned_cols=78 Identities=27% Similarity=0.302 Sum_probs=64.0
Q ss_pred CceEEEEe-CCC-CCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHh---ccccCCceEEE
Q 013395 103 KTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQE---MRETLKGTVVL 177 (444)
Q Consensus 103 ~~n~~~~~-~~~-~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~---~~~~~~~~i~~ 177 (444)
..||++++ |.. +.+.|++.+|+|+++. | |-+..+|++++|++++.|.+ .|.+++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-------------G---a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-------------G---AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-------------C---TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-------------C---CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 46999999 544 4688999999999973 2 22336899999999999976 46689999999
Q ss_pred EEecCCCCCC-Chhhhhhcc
Q 013395 178 IFQPAEERGT-GAKDMIQEG 196 (444)
Q Consensus 178 ~~~~~EE~g~-G~~~~~~~~ 196 (444)
++..+||.|. |+..++++.
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~~ 395 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEEN 395 (707)
T ss_dssp EEESCGGGTSHHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHhc
Confidence 9999999994 999998763
No 57
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=94.37 E-value=0.2 Score=48.54 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=55.7
Q ss_pred ceEEEEe--CCCCCcEEEEEeccCccCCcCCCCCcccCcCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEec
Q 013395 104 TGVVATV--GSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQP 181 (444)
Q Consensus 104 ~n~~~~~--~~~~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~i~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 181 (444)
..-++++ +++..+.|+|.+|+|+.. -+.+.-+|+|++++.+++|++. +++.++.|+|.+
T Consensus 166 ~l~y~e~~ipG~t~~~IllsaH~cHP~-----------------~ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~p 226 (435)
T 3k9t_A 166 SLTYGEYYIRGELEEEILLTTYTCHPS-----------------MCNDNLSGVALITFIAKALSKL--KTKYSYRFLFAP 226 (435)
T ss_dssp EEEEEEEEECCSSSCEEEEEEECCCCS-----------------CTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEEC
T ss_pred ceEEEEEEecCCCCCEEEEEEEcCCCC-----------------CCCccchHHHHHHHHHHHHhcC--CCCceEEEEEcC
Confidence 3455655 555669999999999732 0222248999999999999863 578999999998
Q ss_pred CCCCCCChhhhhhccc--ccccceeEEe
Q 013395 182 AEERGTGAKDMIQEGV--LENVEAIFGL 207 (444)
Q Consensus 182 ~EE~g~G~~~~~~~~~--~~~~d~~~~~ 207 (444)
+ . -|+..++.+.. .+++.+.+.+
T Consensus 227 g-~--iGS~~yl~~~~~~l~~i~a~lnL 251 (435)
T 3k9t_A 227 E-T--IGSITWLSRNEDKLKNIKMGLVA 251 (435)
T ss_dssp T-T--HHHHHHHHHCGGGGGGEEEEEEC
T ss_pred c-c--HHHHHHHHhChHhhhceEEEEEE
Confidence 2 1 37777766532 2244444444
No 58
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=90.79 E-value=4.6 Score=40.26 Aligned_cols=119 Identities=14% Similarity=0.100 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcC--CceeccC-------C-------------Cc-eEEEEe-CCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLG--IAYRWPV-------A-------------KT-GVVATV-GSG 113 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g--~~~~~~~-------~-------------~~-n~~~~~-~~~ 113 (444)
...+-+.+.|+++.-|..--.....++++++.+++.| ++++..+ + .| -++.+| |.+
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 5567778999999999877777889999999999999 8876322 1 11 133444 432
Q ss_pred --CCcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 013395 114 --SPPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (444)
Q Consensus 114 --~~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (444)
..++|+|.|- +|+=. ..-.| .+ .-.+| .+|.|+.+++++++.+. +++.||..++...|=.
T Consensus 259 ~~~~~~i~LVGKGITFDsGG------islKp--~~--~M~~MK~DM~GAAaVlg~~~aia~l--~l~vnV~~~i~~~ENm 326 (503)
T 1gyt_A 259 SEDARPIVLVGKGLTFDSGG------ISIKP--SE--GMDEMKYDMCGAAAVYGVMRMVAEL--QLPINVIGVLAGCENM 326 (503)
T ss_dssp CTTCCCEEEEEEEEEEECCT------TSCCC--ST--TGGGGGGGGHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEEC
T ss_pred CCCCCcEEEEcCceEecCCC------ccccC--Cc--ChhhcccccchHHHHHHHHHHHHHc--CCCeeEEEEEEeeccC
Confidence 2355666552 22211 11111 01 11233 48999999999999876 5679999988888743
Q ss_pred CCC
Q 013395 186 GTG 188 (444)
Q Consensus 186 g~G 188 (444)
=+|
T Consensus 327 ~sg 329 (503)
T 1gyt_A 327 PGG 329 (503)
T ss_dssp CST
T ss_pred CCC
Confidence 333
No 59
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=90.26 E-value=5.4 Score=39.60 Aligned_cols=117 Identities=14% Similarity=0.065 Sum_probs=76.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCceeccC-------C-------------Cce-EEEEe-CCC
Q 013395 57 DTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPV-------A-------------KTG-VVATV-GSG 113 (444)
Q Consensus 57 ~~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~~~~~-------~-------------~~n-~~~~~-~~~ 113 (444)
....+-+.+.|+++..|..--.....++++++.+++. |++++..+ + .|- ++.+| |.+
T Consensus 177 ~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~ 256 (497)
T 3h8g_F 177 SAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGK 256 (497)
T ss_dssp HHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCC
Confidence 3556778899999999987777788999999999998 99887322 1 121 33444 432
Q ss_pred -CCcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 013395 114 -SPPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (444)
Q Consensus 114 -~~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (444)
..++|+|.|- +|+=.. .-.| .+ .-.+| .+|.|+.+++++++.+. +++.||..++...|=.
T Consensus 257 ~~~~~i~LVGKGiTFDsGG~------slKp--~~--~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~ENm 323 (497)
T 3h8g_F 257 KADKPFVLVGKGITFDTGGI------SLKP--GA--GMDEMKYDMCGAASVFGTLRAVLEL--QLPVNLVCLLACAENM 323 (497)
T ss_dssp TTSCCEEEEEEEEEEECCTT------SCCC--ST--TGGGGGGTTHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEEC
T ss_pred CCCCcEEEEcCceEeccCCc------cCCC--cc--chhhccccchHHHHHHHHHHHHHHc--CCCeEEEEEEEeeccC
Confidence 3456666652 332111 1111 01 12234 48999999999999976 5678999988888743
No 60
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=89.76 E-value=6.3 Score=38.96 Aligned_cols=119 Identities=13% Similarity=0.008 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CC-------------ce-EEEEe-CCCCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AK-------------TG-VVATV-GSGSP 115 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~-------------~n-~~~~~-~~~~~ 115 (444)
...+-+.+.|+++.-|..--.....++++++.+++.|++++..+ +. |- +..++ +.++.
T Consensus 165 ~~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~ 244 (491)
T 2hc9_A 165 DLSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGST 244 (491)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCC
Confidence 34566788999999998777778899999999999999987322 11 11 33333 32223
Q ss_pred cEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 116 PFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 116 ~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
++|+|.|- +|+=. ..-.| .+ .-.+| .+|.|+.+++++++.+. +++.+|..++...|=.=+|
T Consensus 245 ~~i~LVGKGiTFDsGG------~slKp--~~--~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~ENm~sg 311 (491)
T 2hc9_A 245 EHIALVGKGVVYDTGG------LQIKT--KT--GMPNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVENNVSP 311 (491)
T ss_dssp CEEEEEEEEEEEECCT------TSCCC--TT--TSTTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEECCST
T ss_pred CcEEEEcCceEecCCC------ccCCC--Cc--ChhhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeecCCCC
Confidence 45555552 22211 11111 01 12334 48999999999999876 5688999988888743333
No 61
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=89.06 E-value=4.5 Score=40.14 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------C-------------Cce-EEEEe-CCC-C
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------A-------------KTG-VVATV-GSG-S 114 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~-------------~~n-~~~~~-~~~-~ 114 (444)
...+-+.+.|+++..|..--.....++++++.+++.|++++..+ + .|- ++.++ |.+ .
T Consensus 195 ~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 274 (515)
T 3kzw_A 195 SIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKD 274 (515)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSS
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 45666779999999998777778889999999999999987322 1 121 33344 332 2
Q ss_pred CcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 013395 115 PPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (444)
Q Consensus 115 ~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (444)
.++|+|.|- +|+=.. .-.| + -.-.+| .+|.|+.+++++++.+. +++.+|..++...|=.
T Consensus 275 ~~~i~LVGKGiTFDsGG~------slKp---~-~~M~~MK~DM~GAAaVlg~~~a~a~l--~lpvnv~~~i~~~ENm 339 (515)
T 3kzw_A 275 EAPIALVGKGITYDSGGY------SIKT---K-NGMATMKFDMCGAANVVGIIEAASRL--QLPVNIVGVLACAENM 339 (515)
T ss_dssp CCCEEEEEEEEEEECCTT------SCCC---H-HHHTTGGGGGHHHHHHHHHHHHHHHT--TCSCEEEEEEEEEEEC
T ss_pred CCcEEEecCceEEecCCc------CCCC---c-cChhhchhchHHHHHHHHHHHHHHHc--CCCceEEEEEEeeccC
Confidence 355665552 222110 0001 0 012334 48999999999999987 4678998888877643
No 62
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=88.67 E-value=6.5 Score=38.89 Aligned_cols=115 Identities=13% Similarity=0.065 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCceeccC-------C-------------Cce-EEEEe-CCCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPV-------A-------------KTG-VVATV-GSGS 114 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~~~~~-------~-------------~~n-~~~~~-~~~~ 114 (444)
...+-+.+.|+++..|..--.....++++++.+++. |++++..+ + .|- +..+| |.+.
T Consensus 174 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 253 (490)
T 3jru_B 174 ATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGD 253 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCC
Confidence 456677899999999987777788899999988887 88886322 1 121 33344 3333
Q ss_pred CcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013395 115 PPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE 184 (444)
Q Consensus 115 ~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 184 (444)
.++|+|.|- +|+=. ..-.| .+ .-.+| .+|.|+.+++++++.+. +++.||..++...|=
T Consensus 254 ~~~i~LVGKGiTFDsGG------~slKp--~~--~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 317 (490)
T 3jru_B 254 ARPYVLVGKGITFDTGG------VNLKT--QG--GIEEMKYDMCGGATVIGTFVATVKA--ELPINLVVVVPAVEN 317 (490)
T ss_dssp SCCEEEEECEEEEECCT------TSCCC--SS--CGGGGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CCcEEEEcCeeEecCCC------ccCCC--cc--cHhhCcccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 455666552 22211 11111 01 11233 48999999999999987 567899888887774
No 63
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=88.25 E-value=0.79 Score=45.71 Aligned_cols=80 Identities=14% Similarity=0.001 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCC---CCCcCcHHHHHHH--HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAP---IFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~--~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
+|+.+...+++++++. |.+...... ..+|+|++..... .+|++.++++.. .+|++.|-+...++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r--------yMHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL--------AMHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE--------STTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh--------ccccHHHHhhHHHHHH
Confidence 4788999999999887 876543211 1357777665542 388877656553 4999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 013395 425 GAVIHAAFAHSYLV 438 (444)
Q Consensus 425 ~~~~~~~~l~~~~~ 438 (444)
.++++..++.++-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999987643
No 64
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=88.05 E-value=7.3 Score=38.57 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcC--CceeccC-------CCce--------------EEEEe-CCC
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLG--IAYRWPV-------AKTG--------------VVATV-GSG 113 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g--~~~~~~~-------~~~n--------------~~~~~-~~~ 113 (444)
...+-+.+.|+++.-|..--.....++++++.+++.| ++++..+ +.+. ++.+| |.+
T Consensus 159 ~~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~ 238 (484)
T 1lam_A 159 LFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSP 238 (484)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSS
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCC
Confidence 4466678899999999877777889999999999999 8876322 1111 33333 322
Q ss_pred --CCcEEEEEeccCccCCcCCCCCcccCcCCCc-c----ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 013395 114 --SPPFVALRADMDALPIQELVEWEHKSKIDGK-M----HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAE 183 (444)
Q Consensus 114 --~~~~ill~~H~D~vp~~~~~~w~~~p~~~g~-i----~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 183 (444)
..++|+|.|- +-+|+. ||. | .-.+| .+|.|+.+++++++.+. +++.||..++...|
T Consensus 239 ~~~~~~i~LVGK----------GITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~l~vnv~~~i~~~E 304 (484)
T 1lam_A 239 NASEPPLVFVGK----------GITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKL--DLPINIVGLAPLCE 304 (484)
T ss_dssp STTSCCEEEEEC----------EEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEE
T ss_pred CCCCCcEEEEec----------ceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHc--CCCeeEEEEEEeec
Confidence 1234555442 112221 110 1 11234 48999999999999976 46789998888887
Q ss_pred CCCCC
Q 013395 184 ERGTG 188 (444)
Q Consensus 184 E~g~G 188 (444)
=.=+|
T Consensus 305 Nm~sg 309 (484)
T 1lam_A 305 NMPSG 309 (484)
T ss_dssp ECCST
T ss_pred cCCCC
Confidence 43333
No 65
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=87.34 E-value=7.6 Score=38.16 Aligned_cols=114 Identities=14% Similarity=0.072 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC------CCce--------------EEEEeCCCCCcE
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTG--------------VVATVGSGSPPF 117 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~------~~~n--------------~~~~~~~~~~~~ 117 (444)
...+-+.+.|+++..|..--.....++++++.+++.|++++..+ +.+. +..+++....++
T Consensus 165 ~~a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y~~~~~~~ 244 (482)
T 3ij3_A 165 DWLTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKWGDIKAPK 244 (482)
T ss_dssp HHHHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEESCTTSCE
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEeCCCCCCe
Confidence 34566788999999998766677889999999999999886321 1111 222232222344
Q ss_pred EEEEeccCccCCcCCCCCcccCcCCCc-c----ccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 013395 118 VALRADMDALPIQELVEWEHKSKIDGK-M----HACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (444)
Q Consensus 118 ill~~H~D~vp~~~~~~w~~~p~~~g~-i----~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (444)
|+|.|- +-+|+. ||. | .-.+| .+|.|+.+++++++.+. +++.+|..++...|=.
T Consensus 245 i~LVGK----------GITFDs--GGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~lpvnv~~ii~~~ENm 306 (482)
T 3ij3_A 245 VTLVGK----------GVCFDS--GGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQ--QLPVRLRLLIPAVENA 306 (482)
T ss_dssp EEEEEC----------EEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEEC
T ss_pred EEEEcc----------ceEeec--CCccCcCccchhhccccchHHHHHHHHHHHHHHc--CCCceEEEEEEeeccC
Confidence 444441 111111 110 0 11334 48999999999999977 4678999988887743
No 66
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=87.22 E-value=5.8 Score=39.32 Aligned_cols=118 Identities=12% Similarity=-0.027 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------CC-------------c-eEEEEe-CCC-CC
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AK-------------T-GVVATV-GSG-SP 115 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~~-------------~-n~~~~~-~~~-~~ 115 (444)
..+-+.+.|+++..|..--.....++++++.+++.|++++..+ +. | -+..+| +.+ ..
T Consensus 203 ia~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~ 282 (522)
T 4efd_A 203 VATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPV 282 (522)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCS
T ss_pred HHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCC
Confidence 3456778999999998777778899999999999999987322 11 1 133344 322 23
Q ss_pred cEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 116 PFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 116 ~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
++|+|.|- +|+=.. .-.| + -.-.+| .+|.|+.+++++++.+. +++.+|..++...|=.=+|
T Consensus 283 ~~iaLVGKGITFDSGGl------sLKp---~-~~M~~MK~DMgGAAaVlga~~a~a~l--~lpvnV~~vl~~~ENm~sg 349 (522)
T 4efd_A 283 KKVSLVGKGIVYDCGGL------ALKP---A-DYMKLMKHDMGGAAAVFCGFLTAVRL--QQPVQLSCTLCLAENAIGP 349 (522)
T ss_dssp EEEEEEEEEEETCCCCS------SSCH---H-HHHHHGGGTTHHHHHHHHHHHHHHHH--TCSEEEEEEEEEEECCC-C
T ss_pred CcEEEecCceEeecCCc------cCCC---c-cchhhcccccchHHHHHHHHHHHHHc--CCCceEEEEEEEeccCCCC
Confidence 55665552 222110 0000 0 011223 48999999999999876 5678898888887743333
No 67
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=87.21 E-value=0.58 Score=46.23 Aligned_cols=77 Identities=19% Similarity=0.091 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCC---CCCcCcHHHHHHHH--cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAP---IFTGSEDFAFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~~--~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
.++.+...+++++++. |.+...... ..+|++|++.+... +|++-++++.. .+||+.|-+...++..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL--------GMHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc--------ccchHHHHhhHHHHHH
Confidence 5788888999998887 776543111 14566666666543 77776655543 3999999999999999
Q ss_pred HHHHHHHHHHH
Q 013395 425 GAVIHAAFAHS 435 (444)
Q Consensus 425 ~~~~~~~~l~~ 435 (444)
.++++..++.+
T Consensus 439 ~~~l~~af~~~ 449 (450)
T 2glf_A 439 TYVAYRSLMEK 449 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999865
No 68
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=86.21 E-value=13 Score=36.93 Aligned_cols=122 Identities=13% Similarity=0.071 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHcCCceeccC-------C-------------Cce-EEEEe-CCC-C
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------A-------------KTG-VVATV-GSG-S 114 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~~~~~-------~-------------~~n-~~~~~-~~~-~ 114 (444)
...+-+.+.|+++..|..--.....++..++.+++.|++++..+ + .|- ++.++ +.+ .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 45667789999999998777777888888888899999987322 1 121 33444 332 3
Q ss_pred CcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCCC
Q 013395 115 PPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (444)
Q Consensus 115 ~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (444)
.++|+|.|- +|+=. ..-.|..+.. -.+| .+|.|+.+++++++.+.+ ..+.+|..++...|=.=+|
T Consensus 283 ~~~iaLVGKGITFDsGG------~slKp~~g~~--M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~ENm~sg 353 (528)
T 3kr4_A 283 KKKIALVGKGITFDSGG------YNLKAAPGSM--IDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCENMVSK 353 (528)
T ss_dssp CEEEEEEEEEEEEECCT------TSCSCSTTCC--GGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEECCST
T ss_pred CCcEEEecCceEeecCC------cccCCCCCcC--HHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeeccCCCC
Confidence 456666663 33321 1111111111 1234 489999999999998764 2257888888777643333
No 69
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=86.20 E-value=7.8 Score=38.30 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCceeccC-------C-------------Cce-EEEEe-CCC-
Q 013395 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPV-------A-------------KTG-VVATV-GSG- 113 (444)
Q Consensus 58 ~~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~~~~~-------~-------------~~n-~~~~~-~~~- 113 (444)
...+-+.+.|+++..|..--.....++++++.+++. |++++..+ + .|- ++.+| |++
T Consensus 162 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 241 (486)
T 3pei_A 162 AIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNE 241 (486)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCC
Confidence 446677899999999987777788999999999988 88886322 1 121 33344 322
Q ss_pred CCcEEEEEec---cCccCCcCCCCCcccCcCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 013395 114 SPPFVALRAD---MDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE 184 (444)
Q Consensus 114 ~~~~ill~~H---~D~vp~~~~~~w~~~p~~~g~i~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 184 (444)
..++|+|.|- +|+=. ..-.| .+ .-.+| .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 242 ~~~~i~LVGKGiTFDsGG------~slKp--~~--~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~i~~~EN 306 (486)
T 3pei_A 242 GDAPIVLVGKGLVFDNGG------ICIKQ--AA--GMDSMKMDMGGVAAVMGTMKAIAML--NLPVNVVGVMGLAEN 306 (486)
T ss_dssp TSCCEEEEEEEEETEECC----------------------EECSHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEC
T ss_pred CCCcEEEEccceEEecCC------cccCC--cc--chhhhhccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 3355666552 22211 00001 00 12234 48999999999999976 567899988888774
No 70
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=83.06 E-value=0.34 Score=47.70 Aligned_cols=77 Identities=10% Similarity=0.014 Sum_probs=57.2
Q ss_pred cCCHHHHHHHHHHHHHHhCCcccccCCC--CCcCcHHHHHHH---HcCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 013395 349 MNDVRIYQHVRRVTAEILGEENVKLAPI--FTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLP 423 (444)
Q Consensus 349 ~~d~~l~~~~~~~~~~~~g~~~~~~~~~--~~g~tD~~~~~~---~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~ 423 (444)
..|..+...+++++++. |.+....... .+|++|++.+.. .+|++.++++. -.+|++.|.+...++.
T Consensus 342 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~--------~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 342 ATNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPT--------FAMHSIRELAGSHDLA 412 (428)
T ss_dssp SCCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCC--------CSCSSSSCCCCSSHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhh--------cccchHHHHhhHHHHH
Confidence 36888898999998887 8765432111 567788877754 27776554443 4499999999999999
Q ss_pred HHHHHHHHHHH
Q 013395 424 IGAVIHAAFAH 434 (444)
Q Consensus 424 ~~~~~~~~~l~ 434 (444)
..++++..++.
T Consensus 413 ~~~~ll~af~~ 423 (428)
T 2ijz_A 413 HLVKVLGAFYA 423 (428)
T ss_dssp HHHTTHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 71
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=81.98 E-value=2 Score=43.36 Aligned_cols=80 Identities=15% Similarity=0.002 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHHh-----CCcccccC---CCCCcCcHHHHHH-H-HcCCcEEEeccCCCCCCCCCCCCCCCCCCCC
Q 013395 350 NDVRIYQHVRRVTAEIL-----GEENVKLA---PIFTGSEDFAFFL-D-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDE 419 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~-----g~~~~~~~---~~~~g~tD~~~~~-~-~~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i 419 (444)
+++.+...+++++++.. |.+..... ...+|+|+..... + .+|++.++++.. .+|++.|-+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r--------yMHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL--------AMHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE--------STTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh--------ccchHHHHhhH
Confidence 47788888888888752 55533211 1235777765554 3 388877656553 49999999999
Q ss_pred CchHHHHHHHHHHHHHHh
Q 013395 420 HVLPIGAVIHAAFAHSYL 437 (444)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~ 437 (444)
.++..+++++..++.++-
T Consensus 544 ~Dv~~~vkLl~aFl~~~~ 561 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYN 561 (571)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHH
Confidence 999999999999998764
No 72
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=81.70 E-value=0.9 Score=45.02 Aligned_cols=75 Identities=15% Similarity=0.027 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHHhCCcccccCC----CCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVKLAP----IFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
.|..+...+++++++. |.+...... ...|+|+...+.+. +|++.++++. -..|++.|.+...++..
T Consensus 377 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~--------~~mHS~~E~~~~~Di~~ 447 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAV--------ISMHSPMEITSKFDLYN 447 (458)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEE--------BSTTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhh--------cccchHHHHhhHHHHHH
Confidence 4788899999999987 877543111 14456655555443 7776654444 34999999999999999
Q ss_pred HHHHHHHHH
Q 013395 425 GAVIHAAFA 433 (444)
Q Consensus 425 ~~~~~~~~l 433 (444)
.++++..++
T Consensus 448 ~~~ll~af~ 456 (458)
T 1y7e_A 448 AYLAYKAFY 456 (458)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999988775
No 73
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=79.90 E-value=0.56 Score=46.13 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=41.1
Q ss_pred HHhcCCCCCcchHHHHHHHHHHHHHcCCce---------------eccCCCceEEEEe-CCC---CCcEEEEEeccCcc
Q 013395 68 QIHENPELAYEEFETSELIRRELDQLGIAY---------------RWPVAKTGVVATV-GSG---SPPFVALRADMDAL 127 (444)
Q Consensus 68 ~~~~~ps~s~~e~~~~~~i~~~l~~~g~~~---------------~~~~~~~n~~~~~-~~~---~~~~ill~~H~D~v 127 (444)
++..+=+.+.-+..+.++++++|++.||.. .......|+++.. |.+ ..+.+++.||+|..
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 445555556677888899999999998831 1111226899987 543 24789999999997
No 74
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=73.36 E-value=2.5 Score=41.79 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=33.4
Q ss_pred chHHHHHHHHHHHHHcCCcee------------ccCCCceEEEEe--CCC---CCcEEEEEeccCcc
Q 013395 78 EEFETSELIRRELDQLGIAYR------------WPVAKTGVVATV--GSG---SPPFVALRADMDAL 127 (444)
Q Consensus 78 ~e~~~~~~i~~~l~~~g~~~~------------~~~~~~n~~~~~--~~~---~~~~ill~~H~D~v 127 (444)
-+..+.++++++|++.||+.- +.+...|+++.+ |.+ .++. ++.||+|..
T Consensus 34 T~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 34 TEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp SHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 467899999999999998721 122334555543 542 2345 999999997
No 75
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=72.60 E-value=4.9 Score=39.61 Aligned_cols=50 Identities=22% Similarity=0.127 Sum_probs=37.4
Q ss_pred chHHHHHHHHHHHHHcCCceecc------------CC-CceEEEEe-CCC-CCcEEEEEeccCcc
Q 013395 78 EEFETSELIRRELDQLGIAYRWP------------VA-KTGVVATV-GSG-SPPFVALRADMDAL 127 (444)
Q Consensus 78 ~e~~~~~~i~~~l~~~g~~~~~~------------~~-~~n~~~~~-~~~-~~~~ill~~H~D~v 127 (444)
-+..+.+++++.|++.||..-.. +. ..|+++.. |.+ ..+.+++.||+|.+
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 46789999999999999975210 11 25899987 543 23789999999987
No 76
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=67.92 E-value=2.8 Score=41.49 Aligned_cols=75 Identities=9% Similarity=-0.024 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHHhCCcccc-cC---CCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013395 350 NDVRIYQHVRRVTAEILGEENVK-LA---PIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 424 (444)
Q Consensus 350 ~d~~l~~~~~~~~~~~~g~~~~~-~~---~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~~~ 424 (444)
.|..+...+++++++. |.+... .. ....|+|....+.+. +|++.++++. -.+|++.|.+...++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~--------l~MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVAL--------LNMHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEE--------ESTTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhh--------cccchHHHHhhHHHHHH
Confidence 4788889999999887 776543 11 113466654444433 7877654444 34999999999999999
Q ss_pred HHHHHHHHH
Q 013395 425 GAVIHAAFA 433 (444)
Q Consensus 425 ~~~~~~~~l 433 (444)
.++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999988764
No 77
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=66.82 E-value=7.6 Score=38.21 Aligned_cols=65 Identities=18% Similarity=0.153 Sum_probs=48.2
Q ss_pred CCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCC---CCCCCCCchHHHHHHHHHHHHHHhhhcCCC
Q 013395 375 PIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSP---YFTIDEHVLPIGAVIHAAFAHSYLVNSGKL 443 (444)
Q Consensus 375 ~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~---nE~i~i~~~~~~~~~~~~~l~~~~~~~~~~ 443 (444)
....+++|...|.+. +|++.+..... ......|++ -++++.+.+.+..++++.++..+......+
T Consensus 369 ~~~~~~SD~~~f~~~GiP~~~l~~~~~----~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~~ 437 (444)
T 3iib_A 369 NKASGGPDVSMLPALGVPVASLRQDGS----DYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVEL 437 (444)
T ss_dssp SCCCCCGGGTTSGGGTCCEEEEEECCT----TGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCCccHHHHHCCCCEEEeecCCC----cCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 456778998888775 99865544321 112458998 578899999999999999999998876654
No 78
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=66.25 E-value=20 Score=32.84 Aligned_cols=87 Identities=15% Similarity=0.041 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHHh-CCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCCCCCCch-----H
Q 013395 351 DVRIYQHVRRVTAEIL-GEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVL-----P 423 (444)
Q Consensus 351 d~~l~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~i~i~~~-----~ 423 (444)
++.+.+.+.+.+++.. +.+.... ....+++|...|.+. +|++..+..... +.....|++.+.++.-+. .
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~~~~~-~~~~~~sD~~~f~~~GiP~~~~~~~~~~---~~~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLTYGFD-TCGYACSDHASWHNAGYPAAMPFESKFN---DYNPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEE-CCSSCCSTHHHHHHTTCCEECEESSCGG---GSCTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCCcccC-CCCCCCCcHHHHHHCCCCEEEecccccc---cCCCCCCCccccccccCccHHHHH
Confidence 5567777777776652 2222111 223367898888764 997544321110 112568999998876654 7
Q ss_pred HHHHHHHHHHHHHhhhcC
Q 013395 424 IGAVIHAAFAHSYLVNSG 441 (444)
Q Consensus 424 ~~~~~~~~~l~~~~~~~~ 441 (444)
..+++++.++.++...+.
T Consensus 274 ~~~~l~~~~~~~La~~~~ 291 (299)
T 1rtq_A 274 KFTQLGLAYAIEMGSATG 291 (299)
T ss_dssp HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 788888888888776543
No 79
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=58.63 E-value=5.6 Score=39.33 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCCCC
Q 013395 152 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (444)
Q Consensus 152 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (444)
.++.++|.|+. +.. .++.++.++++..||.|+
T Consensus 264 ~~~~~~l~al~---~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 264 ICAYTSFEAML---EMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHHHHHHHHH---TCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHH---hhc-cCCCeEEEEEEccCCCCC
Confidence 45555555544 432 467899999999999984
No 80
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=54.45 E-value=46 Score=23.07 Aligned_cols=65 Identities=11% Similarity=0.200 Sum_probs=41.2
Q ss_pred CcEEEEEEEeCCChhhHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCCCCCccCCHHHHHHHHHHHHHHhCCc
Q 013395 295 DSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEE 369 (444)
Q Consensus 295 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~ 369 (444)
+--++++|+|...+...+.....+++.+... -..++.+++.. ..-....++.+++.+..+++ |..
T Consensus 15 dgqeieidirvstgkeleralqelekalara---garnvqitisa------endeqakelleliarllqkl-gyk 79 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARA---GARNVQITISA------ENDEQAKELLELIARLLQKL-GYK 79 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHH---TCSEEEEEEEC------SSHHHHHHHHHHHHHHHHHH-TCS
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhc---cccceEEEEEe------cChHHHHHHHHHHHHHHHHh-CCC
Confidence 4468899999999999988888888876542 22245555431 01112234677777777766 644
No 81
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=54.27 E-value=27 Score=36.44 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=38.9
Q ss_pred hHHHHHHhhhcchhhHHHHHHHHHHHhcCCCCCc--chHHHHHHHHHHHHHcCCc-ee
Q 013395 44 SIKSRIIELANDQDTVNWMKKMRRQIHENPELAY--EEFETSELIRRELDQLGIA-YR 98 (444)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ps~s~--~e~~~~~~i~~~l~~~g~~-~~ 98 (444)
.+.+.+...++. +.+.+.++.+.+.|-.++ .+.++++|+++.|++.|++ ++
T Consensus 13 ~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~ 66 (707)
T 3fed_A 13 SIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAK 66 (707)
T ss_dssp CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCcee
Confidence 445555555554 577778888888887666 4678999999999999998 54
No 82
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=51.20 E-value=23 Score=35.14 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=36.8
Q ss_pred CcEEEEEEeecCcccccccCcEEEEEEEeCCChhhHHHHHHHHHHHHHH
Q 013395 276 SQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG 324 (444)
Q Consensus 276 ~~t~~v~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 324 (444)
..|+|++.++ .-++.+++.+++|+++..+.+++.++++++++.
T Consensus 347 ~~S~n~gv~~------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~ 389 (490)
T 3mru_A 347 ETSLNVGVIT------TEENKVTVLCLIRSLIDSGRSQVEGMLQSVAEL 389 (490)
T ss_dssp EEEEEEEEEE------EETTEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEE------EeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHH
Confidence 4677777775 336889999999999999999999999999876
No 83
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=44.85 E-value=17 Score=35.38 Aligned_cols=72 Identities=17% Similarity=0.064 Sum_probs=47.5
Q ss_pred HHHHHHHhCCcccccCCCCCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCCCC---CCCCchHHHHHHHHHHHH
Q 013395 359 RRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFT---IDEHVLPIGAVIHAAFAH 434 (444)
Q Consensus 359 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~nE~---i~i~~~~~~~~~~~~~l~ 434 (444)
....+++ +.+ . .....+.+|...|.+. +|++.+ .+... ....|++... ++.+.+...+++++.++.
T Consensus 328 ~~~~~~~-~~~-~--~~~~~~~SD~~~F~~~GIP~~~~-~~~~~-----~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~ 397 (421)
T 2ek8_A 328 AAASSRL-SGV-L--PYGQEGRSDHESFHALGIPAALF-IHAPV-----EPWYHTPNDTLDKISKEKLDNVADIVGSAVY 397 (421)
T ss_dssp HHHHHHH-TSC-C--CEEECCSSTHHHHHTTTCCEEEE-EEESC-----CTTTTSTTCCGGGBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCC-C--CCCCCCCCccHHHHHCCCCEEEE-ECCcC-----CCCCCCcccchhhCCHHHHHHHHHHHHHHHH
Confidence 3444444 654 2 2334567888777764 998643 22211 1357999887 788889999999999998
Q ss_pred HHhhhc
Q 013395 435 SYLVNS 440 (444)
Q Consensus 435 ~~~~~~ 440 (444)
++...+
T Consensus 398 ~la~~~ 403 (421)
T 2ek8_A 398 QAARPG 403 (421)
T ss_dssp HHHSSS
T ss_pred HHhCCC
Confidence 887654
No 84
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=34.68 E-value=1e+02 Score=30.46 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=34.5
Q ss_pred CcchHHHHHHHHHHHHHcCCcee-----cc--C--------CCceEEEEe-CCC---CCcEEEEEeccCcc
Q 013395 76 AYEEFETSELIRRELDQLGIAYR-----WP--V--------AKTGVVATV-GSG---SPPFVALRADMDAL 127 (444)
Q Consensus 76 s~~e~~~~~~i~~~l~~~g~~~~-----~~--~--------~~~n~~~~~-~~~---~~~~ill~~H~D~v 127 (444)
+.-+..+.+++++.|++.||..- |. . +...++|.. +++ ...--++.+|.|.-
T Consensus 49 spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP 119 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSP 119 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCC
Confidence 34578899999999999999752 11 1 122466654 543 12456788999983
No 85
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=29.04 E-value=53 Score=30.16 Aligned_cols=58 Identities=21% Similarity=0.179 Sum_probs=40.6
Q ss_pred CCcCcHHHHHHHH-cCCcEEEeccCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHhhhc
Q 013395 377 FTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPY---FTIDEHVLPIGAVIHAAFAHSYLVNS 440 (444)
Q Consensus 377 ~~g~tD~~~~~~~-~p~~~~~~G~~~~~pg~~~~~H~~n---E~i~i~~~~~~~~~~~~~l~~~~~~~ 440 (444)
..+.+|-..|.+. +|++.+....- ....|+++ |+|+.+.+.+..+++..++.++|..+
T Consensus 240 ~~~~SDH~pF~~~GIP~l~~~~~~~------~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~ 301 (312)
T 4f9u_A 240 GLVDDDHRPFLDENVPVLHLVATPF------PDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRH 301 (312)
T ss_dssp SCCCCTTHHHHTTTCCEEEEECSSC------CTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCchHHHHHCCCCEEEEECCCC------CCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445787777765 99765533221 13478876 55677889999999999999998764
No 86
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=25.14 E-value=39 Score=34.84 Aligned_cols=36 Identities=3% Similarity=0.111 Sum_probs=25.8
Q ss_pred HHHHHHHHhc-----CCCCCcchHHHHHHHHHHHHHcCCce
Q 013395 62 MKKMRRQIHE-----NPELAYEEFETSELIRRELDQLGIAY 97 (444)
Q Consensus 62 l~~l~~~~~~-----~ps~s~~e~~~~~~i~~~l~~~g~~~ 97 (444)
+.+.++.+.+ +...+..+.++++||++.|++.|++.
T Consensus 20 i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 20 FTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 3334454544 33455667899999999999999974
No 87
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=24.33 E-value=1.4e+02 Score=30.09 Aligned_cols=50 Identities=12% Similarity=0.271 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHHHHcCCcee-----cc--C--------CCceEEEEe-CCC--CC-c-EEEEEeccCcc
Q 013395 78 EEFETSELIRRELDQLGIAYR-----WP--V--------AKTGVVATV-GSG--SP-P-FVALRADMDAL 127 (444)
Q Consensus 78 ~e~~~~~~i~~~l~~~g~~~~-----~~--~--------~~~n~~~~~-~~~--~~-~-~ill~~H~D~v 127 (444)
-+..+.++++++|++.||..- |. . +...|+|.. |.+ .+ . --++.+|.|.-
T Consensus 22 T~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 22 SNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp SHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 467899999999999999753 11 1 123577665 654 22 3 56888999983
No 88
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=23.00 E-value=2.5e+02 Score=25.55 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCccc-ccCCCCCcCcHHHHHHH-H-cCCcEEEeccCCC-CCCCCCCCCCCC---CCCCCCchHHHH
Q 013395 354 IYQHVRRVTAEILGEENV-KLAPIFTGSEDFAFFLD-E-IPGSFLLLGMLND-SVGSLYPLHSPY---FTIDEHVLPIGA 426 (444)
Q Consensus 354 l~~~~~~~~~~~~g~~~~-~~~~~~~g~tD~~~~~~-~-~p~~~~~~G~~~~-~pg~~~~~H~~n---E~i~i~~~~~~~ 426 (444)
+.+.+.+..+.+ |.... .........+|-..|.+ . +|++.+ +....+ ..+.....|+++ |+|+.+.+....
T Consensus 222 l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~l-i~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 222 IVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDI-INYDPESKTGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEE-EBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEE-ecccCcccCCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 455555555544 64321 11112234689888887 4 997554 222100 002236799999 889999999999
Q ss_pred HHHHHHHHH
Q 013395 427 VIHAAFAHS 435 (444)
Q Consensus 427 ~~~~~~l~~ 435 (444)
+++..++.+
T Consensus 300 ~~~~~~vy~ 308 (309)
T 3tc8_A 300 QTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 988888754
No 89
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=20.46 E-value=1.2e+02 Score=22.51 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHc-CCcee
Q 013395 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYR 98 (444)
Q Consensus 59 ~~~l~~l~~~~~~~ps~s~~e~~~~~~i~~~l~~~-g~~~~ 98 (444)
+++++++.+.....-+ .|.++|++|+++|.+. |-...
T Consensus 26 q~~a~~~a~~al~~~~---~ek~iA~~IK~~fDkkyG~~Wh 63 (97)
T 4ds1_A 26 KEDILTISKDALDKYQ---LERDIAGTVKKQLDVKYGNTWH 63 (97)
T ss_dssp HHHHHHHHHHHHHHCS---SHHHHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhCccCCCCE
Confidence 3444444444443222 5789999999999865 65544
Done!