Your job contains 1 sequence.
>013396
MEENKQCDARLTSPAAFVEGGIQDACDDACSICLEPFSDSDPSTVTSFDFHVRFFRVVIL
RDLGNFSLLLQLTSCRHEFHLQCVLEWCQRSSQCPMCWQPISLKDPTRFCVNFAARNYLR
RSNKRGALVLIRLEIPPYFIIRLWETLSYRVFVFCLWASFRQQYQVSLILSGGFILILFP
SMQLPVGATDAELEERIIQHLAAAAAMGRARHIGRRESQRNRSSAQARPQFFVFSTHPNT
STADPVSSSPTQREGEPTPTVTVPTPSSPAAAGEESPEQSTQLLSASASGSSALASSQHE
STLNNRRSPNQPSPNSQDRAGPSDFQSFSESLKSRFNAVSMRYKESISKSTRGWKERFFS
RYNTTSDLGSEVRREDDAGIERVSGMMERLETRDNNSSSTASVSNSPNNSVPESNNQQVS
ETAHNNPMNDTNAQGSCGASSGTN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013396
(444 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129525 - symbol:RHF1A "RING-H2 group F1A" spe... 155 1.5e-19 2
UNIPROTKB|G4NGM3 - symbol:MGG_04088 "Anaphase-promoting c... 92 6.0e-06 2
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 87 1.3e-05 2
TAIR|locus:2139044 - symbol:AT4G12190 species:3702 "Arabi... 86 2.1e-05 2
TAIR|locus:505006415 - symbol:RHB1A "RING-H2 finger B1A" ... 114 0.00012 1
POMBASE|SPAC343.03 - symbol:apc11 "anaphase-promoting com... 70 0.00021 2
RGD|1306670 - symbol:Rnf139 "ring finger protein 139" spe... 94 0.00052 1
ASPGD|ASPL0000035856 - symbol:AN10394 species:162425 "Eme... 92 0.00086 1
FB|FBgn0038627 - symbol:CG7694 species:7227 "Drosophila m... 101 0.00090 1
>TAIR|locus:2129525 [details] [associations]
symbol:RHF1A "RING-H2 group F1A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009561 "megagametogenesis" evidence=IGI]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IGI] [GO:0055046
"microgametogenesis" evidence=IGI] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 EMBL:Z97335 EMBL:AL161538 GO:GO:0051726
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009561 GO:GO:0055046
GO:GO:0004842 GO:GO:0010498 EMBL:DQ059122 EMBL:AK117968
IPI:IPI00531618 PIR:C85155 RefSeq:NP_193158.2 UniGene:At.24002
ProteinModelPortal:Q4TU14 SMR:Q4TU14 STRING:Q4TU14 PRIDE:Q4TU14
EnsemblPlants:AT4G14220.1 GeneID:827062 KEGG:ath:AT4G14220
TAIR:At4g14220 eggNOG:NOG325168 HOGENOM:HOG000070813
InParanoid:Q4TU14 OMA:AISHVEH PhylomeDB:Q4TU14
ProtClustDB:CLSN2717834 Genevestigator:Q4TU14 Uniprot:Q4TU14
Length = 371
Score = 155 (59.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 72 LTSCRHEFHLQCVLEWCQRSSQCPMCWQPISLKDP 106
+TSC+HE+HLQC++EW QRS +CP+CWQ L+DP
Sbjct: 61 VTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDP 95
Score = 145 (56.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 327 SFSESLKSRFNAVSMRYKESISKSTRGWKERFFSRYNTTSDLGSEVRREDDAGIERVSGM 386
S E++KS+ A S +YKESISKS +G KE+ +R N+ +L V+RE +AGI V+ M
Sbjct: 252 SLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGVARM 311
Query: 387 MERLE 391
+ER++
Sbjct: 312 IERMD 316
Score = 102 (41.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 12 TSPAAFVEGGIQDACDDACSICLEPFSDSDPSTVTS--FDFHVR 53
+S A V + DDACSICLEPF+ DPSTVTS ++H++
Sbjct: 28 SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQ 71
Score = 45 (20.9 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 94 CPMCWQPISLKDPT 107
C +C +P +L+DP+
Sbjct: 46 CSICLEPFTLQDPS 59
>UNIPROTKB|G4NGM3 [details] [associations]
symbol:MGG_04088 "Anaphase-promoting complex subunit 11"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR024991 Pfam:PF12861 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0005680 KO:K03358
EMBL:CM001236 RefSeq:XP_003719750.1 ProteinModelPortal:G4NGM3
EnsemblFungi:MGG_04088T0 GeneID:2677680 KEGG:mgr:MGG_04088
Uniprot:G4NGM3
Length = 104
Score = 92 (37.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 75 CRHEFHLQCVLEWCQRSS---QCPMCWQ 99
C H FH+ C+LEW ++ S QCPMC Q
Sbjct: 52 CGHNFHMHCILEWIKQDSAKGQCPMCRQ 79
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 27 DDACSICLEPFSDSDPS 43
DD C IC F + P+
Sbjct: 21 DDVCGICQVHFDGTCPT 37
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 70 LQLTSCRHEFHLQCVLEWCQRSSQCPMCWQPIS 102
L + C+H FH +C+++W + CPMC +PI+
Sbjct: 46 LGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIA 78
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 30 CSICLEPFSDSD 41
C++CLE F D
Sbjct: 33 CAVCLEDFKGKD 44
>TAIR|locus:2139044 [details] [associations]
symbol:AT4G12190 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546160 RefSeq:NP_192956.1 UniGene:At.65368
ProteinModelPortal:F4JQK3 SMR:F4JQK3 DNASU:826827
EnsemblPlants:AT4G12190.1 GeneID:826827 KEGG:ath:AT4G12190
OMA:PRDITRM Uniprot:F4JQK3
Length = 71
Score = 86 (35.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 74 SCRHEFHLQCVLEWCQRSSQCPMC 97
+C H FH C+LEW +R + CP+C
Sbjct: 42 TCSHVFHNGCLLEWLKRKNTCPLC 65
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 28 DACSICLEPF-SDSDPSTVT 46
+ CSICLE S P +T
Sbjct: 20 EPCSICLESLVSGPKPRDIT 39
>TAIR|locus:505006415 [details] [associations]
symbol:RHB1A "RING-H2 finger B1A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000005881
EMBL:BT024583 EMBL:AK228408 IPI:IPI00549137 RefSeq:NP_567171.1
RefSeq:NP_974488.1 UniGene:At.10854 ProteinModelPortal:Q2HIJ8
SMR:Q2HIJ8 PRIDE:Q2HIJ8 EnsemblPlants:AT4G00335.1
EnsemblPlants:AT4G00335.2 GeneID:828093 KEGG:ath:AT4G00335
TAIR:At4g00335 eggNOG:NOG324180 InParanoid:Q2HIJ8 OMA:WIERSDR
PhylomeDB:Q2HIJ8 ProtClustDB:CLSN2697998 Genevestigator:Q2HIJ8
Uniprot:Q2HIJ8
Length = 190
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 73 TSCRHEFHLQCVLEWCQRSSQCPMCWQPISLKD 105
T C HEFHL C+LEW +RS +CP+C + + D
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>POMBASE|SPAC343.03 [details] [associations]
symbol:apc11 "anaphase-promoting complex subunit Apc11"
species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IDA] [GO:0008054 "cyclin catabolic process"
evidence=IC] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IC] [GO:0030071
"regulation of mitotic metaphase/anaphase transition" evidence=IC]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001841 InterPro:IPR024991 Pfam:PF12861 PROSITE:PS50089
SMART:SM00184 PomBase:SPAC343.03 Prosite:PS00518 EMBL:CU329670
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0030071
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0005680 GO:GO:0031145 GO:GO:0008054
eggNOG:COG5194 HOGENOM:HOG000171951 KO:K03358 OMA:CGICRMP
InterPro:IPR024766 Pfam:PF12678 EMBL:AB001022 PIR:T38652
RefSeq:NP_593423.1 ProteinModelPortal:Q9UT86 IntAct:Q9UT86
STRING:Q9UT86 EnsemblFungi:SPAC343.03.1 GeneID:2543187
KEGG:spo:SPAC343.03 OrthoDB:EOG4N606J NextBio:20804210
Uniprot:Q9UT86
Length = 94
Score = 70 (29.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 75 CRHEFHLQCVLEWCQRSS---QCPMCWQPISLKDPT 107
C+H FH C+ W S QCPM Q + D T
Sbjct: 52 CKHIFHAHCIQNWLATSGSQGQCPMDRQTFVVADST 87
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 27 DDACSICLEPFSDSDPSTVTSFD 49
DD C IC PF P + D
Sbjct: 21 DDVCGICRVPFDGCCPQCTSPGD 43
>RGD|1306670 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISO] [GO:0031396 "regulation of protein
ubiquitination" evidence=ISO] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AH009105 IPI:IPI00360791 ProteinModelPortal:Q9JLC5
UCSC:RGD:1306670 InParanoid:Q9JLC5 Genevestigator:Q9JLC5
Uniprot:Q9JLC5
Length = 100
Score = 94 (38.1 bits), Expect = 0.00052, P = 0.00052
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 66 FSLLLQLTSCRHEFHLQCVLEWCQRSSQCPMCWQPISLKDPTRFCVNFAARN 117
F+ ++T C H FH C+ +W CPMC Q + ++D + N + N
Sbjct: 35 FTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSNVSNNN 86
>ASPGD|ASPL0000035856 [details] [associations]
symbol:AN10394 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005680 "anaphase-promoting complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR024991 Pfam:PF12861
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:BN001306 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0005680 HOGENOM:HOG000171951 OMA:CGICRMP
EnsemblFungi:CADANIAT00009679 Uniprot:C8VHR1
Length = 104
Score = 92 (37.4 bits), Expect = 0.00086, P = 0.00086
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 70 LQLTSCRHEFHLQCVLEWCQRSSQ---CPMCWQPIS 102
L L C H FH+ C++ W Q+ S CPMC Q IS
Sbjct: 47 LLLGKCGHSFHMHCLMTWIQQESSKGLCPMCRQSIS 82
>FB|FBgn0038627 [details] [associations]
symbol:CG7694 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 eggNOG:NOG294567 EMBL:BT001518
RefSeq:NP_001138076.1 RefSeq:NP_650729.1 UniGene:Dm.14942
ProteinModelPortal:Q9VE61 SMR:Q9VE61 PaxDb:Q9VE61 PRIDE:Q9VE61
EnsemblMetazoa:FBtr0083632 EnsemblMetazoa:FBtr0290211 GeneID:42230
KEGG:dme:Dmel_CG7694 UCSC:CG7694-RA FlyBase:FBgn0038627
InParanoid:Q9VE61 OMA:HEFHEEC OrthoDB:EOG4DV43R PhylomeDB:Q9VE61
GenomeRNAi:42230 NextBio:827789 Uniprot:Q9VE61
Length = 147
Score = 101 (40.6 bits), Expect = 0.00090, P = 0.00090
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 71 QLTSCRHEFHLQCVLEWCQRSSQCPMCWQPISLKDP 106
++ C+HEFH +C+L W ++++ CP+C + DP
Sbjct: 84 RILPCKHEFHEECILLWLKKTNSCPLCRYELETDDP 119
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 444 343 0.00096 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 613 (65 KB)
Total size of DFA: 248 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.93u 0.15s 22.08t Elapsed: 00:00:01
Total cpu time: 21.93u 0.15s 22.08t Elapsed: 00:00:01
Start: Fri May 10 16:22:35 2013 End: Fri May 10 16:22:36 2013